Query 006360
Match_columns 648
No_of_seqs 551 out of 2991
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 22:56:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006360.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006360hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 4.9E-28 1.7E-32 257.5 27.8 193 1-210 134-331 (344)
2 2ynn_A Coatomer subunit beta'; 100.0 4E-27 1.4E-31 244.2 28.6 199 1-214 20-221 (304)
3 2ynn_A Coatomer subunit beta'; 100.0 3.3E-27 1.1E-31 244.8 28.0 199 1-216 62-265 (304)
4 3ow8_A WD repeat-containing pr 100.0 3.7E-27 1.3E-31 247.3 27.6 190 1-208 129-319 (321)
5 3frx_A Guanine nucleotide-bind 100.0 8.5E-27 2.9E-31 243.6 29.0 201 1-209 72-316 (319)
6 4gqb_B Methylosome protein 50; 100.0 5.8E-27 2E-31 249.2 27.8 194 1-211 89-290 (344)
7 1vyh_C Platelet-activating fac 100.0 4.6E-27 1.6E-31 254.7 26.3 208 1-214 115-331 (410)
8 1vyh_C Platelet-activating fac 100.0 1.3E-26 4.3E-31 251.3 28.8 191 1-209 199-410 (410)
9 1got_B GT-beta; complex (GTP-b 100.0 1.3E-26 4.5E-31 244.1 28.2 187 2-207 151-340 (340)
10 2pbi_B Guanine nucleotide-bind 99.9 4.6E-26 1.6E-30 242.1 29.5 189 1-207 161-354 (354)
11 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.7E-26 5.8E-31 244.0 25.8 195 1-209 23-224 (345)
12 4ery_A WD repeat-containing pr 99.9 6.3E-26 2.1E-30 234.3 29.0 196 1-213 30-226 (312)
13 4g56_B MGC81050 protein; prote 99.9 1.7E-26 5.9E-31 245.8 24.9 194 1-211 146-344 (357)
14 3ow8_A WD repeat-containing pr 99.9 3.2E-26 1.1E-30 240.2 26.4 196 1-214 87-283 (321)
15 1got_B GT-beta; complex (GTP-b 99.9 9.3E-26 3.2E-30 237.6 28.5 195 1-213 62-260 (340)
16 1erj_A Transcriptional repress 99.9 8.1E-26 2.8E-30 243.1 28.5 197 1-213 130-344 (393)
17 2pm7_B Protein transport prote 99.9 8.9E-26 3E-30 233.3 27.2 199 1-210 16-238 (297)
18 4h5i_A Guanine nucleotide-exch 99.9 4.4E-26 1.5E-30 243.6 22.0 191 1-209 140-342 (365)
19 2xzm_R RACK1; ribosome, transl 99.9 5.2E-25 1.8E-29 231.9 29.5 191 1-212 83-287 (343)
20 3frx_A Guanine nucleotide-bind 99.9 2.5E-25 8.6E-30 232.5 26.7 197 1-215 24-232 (319)
21 2pbi_B Guanine nucleotide-bind 99.9 5.3E-25 1.8E-29 233.8 29.6 197 1-212 71-317 (354)
22 1erj_A Transcriptional repress 99.9 3.3E-25 1.1E-29 238.3 28.0 196 1-212 71-289 (393)
23 3fm0_A Protein CIAO1; WDR39,SG 99.9 3.8E-25 1.3E-29 233.7 28.1 194 1-209 68-282 (345)
24 3iz6_a 40S ribosomal protein R 99.9 2.2E-25 7.7E-30 238.5 25.7 196 2-210 165-375 (380)
25 3f3f_A Nucleoporin SEH1; struc 99.9 2.9E-25 1E-29 227.6 25.4 198 1-212 18-339 (351)
26 2xzm_R RACK1; ribosome, transl 99.9 5.4E-25 1.8E-29 231.8 27.8 189 3-210 35-244 (343)
27 2hes_X YDR267CP; beta-propelle 99.9 5.3E-25 1.8E-29 231.1 26.0 194 2-210 22-230 (330)
28 3dwl_C Actin-related protein 2 99.9 7.3E-26 2.5E-30 239.1 18.9 181 1-185 62-269 (377)
29 3vl1_A 26S proteasome regulato 99.9 2.9E-25 1E-29 237.5 22.9 196 1-212 104-324 (420)
30 2pm7_B Protein transport prote 99.9 1E-24 3.4E-29 225.3 26.0 196 1-210 60-285 (297)
31 3dwl_C Actin-related protein 2 99.9 1.3E-25 4.4E-30 237.2 19.4 199 1-213 18-239 (377)
32 3iz6_a 40S ribosomal protein R 99.9 1.5E-25 5.1E-30 240.0 19.6 197 1-213 73-283 (380)
33 4ery_A WD repeat-containing pr 99.9 2.8E-24 9.6E-29 221.9 28.4 196 1-213 72-271 (312)
34 1nr0_A Actin interacting prote 99.9 1.5E-24 5.1E-29 247.2 28.8 198 1-212 66-357 (611)
35 2ymu_A WD-40 repeat protein; u 99.9 1.4E-24 4.6E-29 242.5 26.9 185 1-207 392-577 (577)
36 4e54_B DNA damage-binding prot 99.9 2.2E-25 7.6E-30 242.7 19.4 201 1-214 126-331 (435)
37 2hes_X YDR267CP; beta-propelle 99.9 1.8E-24 6.3E-29 227.0 25.7 194 1-209 65-279 (330)
38 3dm0_A Maltose-binding peripla 99.9 2E-24 7E-29 249.1 28.4 178 1-185 437-620 (694)
39 3bg1_A Protein SEC13 homolog; 99.9 3.4E-25 1.2E-29 231.2 19.6 200 1-210 20-247 (316)
40 3ei3_B DNA damage-binding prot 99.9 3E-24 1E-28 227.8 27.0 201 1-216 80-288 (383)
41 4g56_B MGC81050 protein; prote 99.9 9.4E-25 3.2E-29 232.4 22.6 194 1-211 101-302 (357)
42 1gxr_A ESG1, transducin-like e 99.9 9.2E-24 3.2E-28 217.2 29.2 194 1-213 104-299 (337)
43 3jrp_A Fusion protein of prote 99.9 3.1E-24 1.1E-28 224.4 25.3 200 1-211 18-241 (379)
44 1nr0_A Actin interacting prote 99.9 6.8E-24 2.3E-28 241.7 28.4 198 1-214 25-274 (611)
45 2aq5_A Coronin-1A; WD40 repeat 99.9 6.1E-24 2.1E-28 227.8 25.6 198 1-212 88-301 (402)
46 1gxr_A ESG1, transducin-like e 99.9 1.8E-23 6.3E-28 215.0 26.9 189 1-209 148-336 (337)
47 3zwl_B Eukaryotic translation 99.9 2.4E-23 8.3E-28 216.5 27.9 198 1-216 39-255 (369)
48 3vl1_A 26S proteasome regulato 99.9 8.5E-24 2.9E-28 226.2 23.0 193 1-210 146-365 (420)
49 3k26_A Polycomb protein EED; W 99.9 1.4E-23 4.7E-28 218.5 23.5 194 1-209 76-365 (366)
50 1sq9_A Antiviral protein SKI8; 99.9 8.4E-24 2.9E-28 224.1 22.1 201 4-210 135-395 (397)
51 2ymu_A WD-40 repeat protein; u 99.9 3.5E-23 1.2E-27 231.0 28.3 187 1-208 351-537 (577)
52 3dm0_A Maltose-binding peripla 99.9 2.3E-23 8E-28 240.3 27.6 196 1-214 389-596 (694)
53 1k8k_C P40, ARP2/3 complex 41 99.9 1.8E-23 6.2E-28 218.8 24.2 198 1-214 15-237 (372)
54 3i2n_A WD repeat-containing pr 99.9 1.5E-23 5E-28 217.9 23.0 197 1-211 124-354 (357)
55 3bg1_A Protein SEC13 homolog; 99.9 2.9E-24 9.9E-29 224.1 17.4 193 1-209 64-292 (316)
56 3jrp_A Fusion protein of prote 99.9 3.3E-23 1.1E-27 216.7 25.5 196 1-210 62-287 (379)
57 4aez_A CDC20, WD repeat-contai 99.9 8.8E-23 3E-27 219.2 29.3 192 1-210 141-336 (401)
58 2j04_B YDR362CP, TAU91; beta p 99.9 8.7E-24 3E-28 237.9 22.1 192 1-210 214-428 (524)
59 3dw8_B Serine/threonine-protei 99.9 2.8E-23 9.6E-28 223.7 24.9 193 1-210 35-315 (447)
60 3zwl_B Eukaryotic translation 99.9 1.5E-22 5.2E-27 210.5 29.3 194 1-210 81-346 (369)
61 4gga_A P55CDC, cell division c 99.9 1.2E-22 4.2E-27 219.7 29.5 195 1-214 154-399 (420)
62 2pm9_A Protein WEB1, protein t 99.9 9.3E-24 3.2E-28 224.8 19.4 198 1-210 172-414 (416)
63 1k8k_C P40, ARP2/3 complex 41 99.9 6.4E-23 2.2E-27 214.7 25.5 193 1-210 59-274 (372)
64 3mmy_A MRNA export factor; mRN 99.9 4.8E-23 1.6E-27 214.1 23.9 179 1-186 46-334 (368)
65 4aow_A Guanine nucleotide-bind 99.9 1.9E-22 6.4E-27 208.5 26.8 194 2-210 136-337 (340)
66 3i2n_A WD repeat-containing pr 99.9 5.6E-23 1.9E-27 213.5 22.9 200 1-213 72-294 (357)
67 3ei3_B DNA damage-binding prot 99.9 1.1E-22 3.9E-27 215.6 25.6 206 1-214 125-343 (383)
68 2xyi_A Probable histone-bindin 99.9 5.4E-23 1.9E-27 223.7 23.5 197 1-211 135-354 (430)
69 3k26_A Polycomb protein EED; W 99.9 4.8E-23 1.6E-27 214.4 21.4 197 1-212 25-262 (366)
70 3mkq_A Coatomer beta'-subunit; 99.9 1.7E-22 5.7E-27 235.0 28.4 207 1-212 20-261 (814)
71 2pm9_A Protein WEB1, protein t 99.9 3.6E-23 1.2E-27 220.3 20.6 201 1-215 74-299 (416)
72 3lrv_A PRE-mRNA-splicing facto 99.9 5.1E-23 1.8E-27 216.4 20.8 193 2-215 44-249 (343)
73 4ggc_A P55CDC, cell division c 99.9 1.3E-21 4.3E-26 200.2 30.4 192 1-211 74-316 (318)
74 4aez_A CDC20, WD repeat-contai 99.9 3.8E-22 1.3E-26 214.3 27.6 197 3-215 100-298 (401)
75 4a11_B DNA excision repair pro 99.9 4.1E-22 1.4E-26 210.5 26.5 199 1-213 50-279 (408)
76 1r5m_A SIR4-interacting protei 99.9 6.4E-22 2.2E-26 209.8 28.0 192 1-211 115-362 (425)
77 2xyi_A Probable histone-bindin 99.9 3.3E-22 1.1E-26 217.5 25.9 198 1-210 188-410 (430)
78 1r5m_A SIR4-interacting protei 99.9 3.2E-22 1.1E-26 212.1 25.1 192 1-209 156-424 (425)
79 3lrv_A PRE-mRNA-splicing facto 99.9 2.8E-22 9.5E-27 210.8 24.5 191 2-211 84-293 (343)
80 4a11_B DNA excision repair pro 99.9 6.4E-22 2.2E-26 209.0 27.4 200 1-215 106-370 (408)
81 3gre_A Serine/threonine-protei 99.9 8.1E-23 2.8E-27 220.7 20.9 192 2-207 178-437 (437)
82 4e54_B DNA damage-binding prot 99.9 3.8E-23 1.3E-27 225.0 18.3 208 1-213 171-390 (435)
83 1sq9_A Antiviral protein SKI8; 99.9 1.4E-22 4.9E-27 214.6 22.0 198 1-216 69-328 (397)
84 4aow_A Guanine nucleotide-bind 99.9 1.3E-21 4.5E-26 202.1 27.7 197 1-215 45-251 (340)
85 3dw8_B Serine/threonine-protei 99.9 1.9E-22 6.4E-27 217.2 21.4 196 1-213 100-376 (447)
86 2vdu_B TRNA (guanine-N(7)-)-me 99.9 5.1E-22 1.8E-26 216.8 25.0 199 1-216 11-277 (450)
87 2aq5_A Coronin-1A; WD40 repeat 99.9 2E-22 6.9E-27 216.0 21.3 194 1-210 138-342 (402)
88 3sfz_A APAF-1, apoptotic pepti 99.9 8.6E-22 3E-26 240.5 29.2 151 1-154 622-775 (1249)
89 1yfq_A Cell cycle arrest prote 99.9 3.1E-22 1.1E-26 207.3 21.5 192 1-211 18-226 (342)
90 3jro_A Fusion protein of prote 99.9 4E-22 1.4E-26 233.2 24.3 201 1-212 16-240 (753)
91 2oaj_A Protein SNI1; WD40 repe 99.9 3.3E-22 1.1E-26 238.8 23.4 192 1-212 24-244 (902)
92 3gre_A Serine/threonine-protei 99.9 7.1E-22 2.4E-26 213.3 23.9 201 1-215 70-297 (437)
93 3v7d_B Cell division control p 99.9 1.2E-21 4.1E-26 213.1 25.5 192 2-214 128-345 (464)
94 3v7d_B Cell division control p 99.9 2.5E-21 8.6E-26 210.6 27.7 190 1-212 169-383 (464)
95 2vdu_B TRNA (guanine-N(7)-)-me 99.9 6.8E-22 2.3E-26 215.8 23.3 194 1-208 109-337 (450)
96 2w18_A PALB2, fancn, partner a 99.9 1.3E-21 4.4E-26 207.5 22.7 174 15-208 156-355 (356)
97 1yfq_A Cell cycle arrest prote 99.9 1.6E-21 5.5E-26 201.9 21.4 194 1-213 63-285 (342)
98 2j04_B YDR362CP, TAU91; beta p 99.9 9.5E-22 3.2E-26 221.3 20.8 197 3-214 170-390 (524)
99 4gga_A P55CDC, cell division c 99.9 8.8E-21 3E-25 205.1 26.9 200 1-215 112-315 (420)
100 4gq1_A NUP37; propeller, trans 99.9 7.9E-22 2.7E-26 212.3 17.7 207 2-213 97-351 (393)
101 1pgu_A Actin interacting prote 99.9 4.8E-21 1.6E-25 214.2 24.5 195 1-215 25-243 (615)
102 1p22_A F-BOX/WD-repeat protein 99.9 1.5E-20 5.2E-25 204.0 27.8 181 4-209 181-364 (435)
103 3jro_A Fusion protein of prote 99.9 2.5E-21 8.4E-26 226.4 23.1 197 1-211 60-286 (753)
104 3sfz_A APAF-1, apoptotic pepti 99.9 9.3E-21 3.2E-25 231.4 29.1 181 1-186 664-901 (1249)
105 3odt_A Protein DOA1; ubiquitin 99.9 1.9E-20 6.5E-25 190.7 26.5 184 5-213 113-299 (313)
106 3odt_A Protein DOA1; ubiquitin 99.9 1.3E-20 4.5E-25 191.9 25.2 189 1-215 66-260 (313)
107 1pgu_A Actin interacting prote 99.9 6.9E-21 2.4E-25 212.9 24.4 188 2-210 414-614 (615)
108 2j04_A TAU60, YPL007P, hypothe 99.9 6.2E-21 2.1E-25 214.0 23.5 173 1-185 92-285 (588)
109 1p22_A F-BOX/WD-repeat protein 99.9 2.5E-20 8.4E-25 202.3 27.3 188 2-215 139-330 (435)
110 3mkq_A Coatomer beta'-subunit; 99.9 1.5E-20 5.2E-25 218.5 26.7 182 1-187 62-248 (814)
111 4gq1_A NUP37; propeller, trans 99.9 2.8E-21 9.5E-26 208.1 19.0 177 5-185 155-377 (393)
112 4ggc_A P55CDC, cell division c 99.9 6.6E-20 2.2E-24 187.4 27.3 199 1-214 32-234 (318)
113 3vu4_A KMHSV2; beta-propeller 99.9 1.4E-20 4.7E-25 199.8 23.0 192 1-211 26-272 (355)
114 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2.4E-20 8.2E-25 202.5 25.3 188 2-215 125-313 (445)
115 2j04_A TAU60, YPL007P, hypothe 99.9 5.2E-21 1.8E-25 214.5 18.9 187 1-212 22-256 (588)
116 3vu4_A KMHSV2; beta-propeller 99.9 4.5E-20 1.5E-24 195.8 25.1 195 2-210 66-336 (355)
117 2oaj_A Protein SNI1; WD40 repe 99.9 1.2E-20 3.9E-25 225.4 22.0 208 1-213 442-735 (902)
118 1l0q_A Surface layer protein; 99.8 1.6E-19 5.6E-24 191.2 25.7 196 1-213 38-236 (391)
119 3mmy_A MRNA export factor; mRN 99.8 6.5E-20 2.2E-24 190.4 22.0 135 20-155 23-162 (368)
120 3f3f_A Nucleoporin SEH1; struc 99.8 9E-20 3.1E-24 186.6 22.3 121 34-155 8-145 (351)
121 3bws_A Protein LP49; two-domai 99.8 7.3E-20 2.5E-24 196.7 22.1 205 1-212 176-392 (433)
122 4h5i_A Guanine nucleotide-exch 99.8 5.5E-20 1.9E-24 196.3 20.8 152 1-154 183-344 (365)
123 1l0q_A Surface layer protein; 99.8 4.6E-19 1.6E-23 187.8 27.1 197 1-216 80-281 (391)
124 2ovr_B FBW7, F-BOX/WD repeat p 99.8 3.6E-19 1.2E-23 193.3 25.6 186 5-214 208-395 (445)
125 3bws_A Protein LP49; two-domai 99.8 2.5E-19 8.7E-24 192.4 21.2 195 1-212 129-336 (433)
126 2w18_A PALB2, fancn, partner a 99.8 5E-19 1.7E-23 187.6 18.5 147 2-151 186-355 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 99.8 5.3E-18 1.8E-22 184.3 25.8 191 1-209 185-386 (415)
128 2oit_A Nucleoporin 214KDA; NH2 99.8 1.3E-18 4.5E-23 190.8 17.0 202 1-211 43-279 (434)
129 2ojh_A Uncharacterized protein 99.8 3E-17 1E-21 164.4 19.6 203 1-211 48-259 (297)
130 2hqs_A Protein TOLB; TOLB, PAL 99.8 1E-16 3.5E-21 174.2 25.4 188 6-211 143-345 (415)
131 2oit_A Nucleoporin 214KDA; NH2 99.7 6.8E-17 2.3E-21 177.1 19.4 203 1-206 99-341 (434)
132 3u4y_A Uncharacterized protein 99.7 1.6E-15 5.4E-20 156.7 26.1 200 1-213 4-210 (331)
133 3vgz_A Uncharacterized protein 99.7 8E-16 2.7E-20 159.7 23.4 198 1-213 47-265 (353)
134 2ecf_A Dipeptidyl peptidase IV 99.7 1.4E-16 4.8E-21 183.9 18.3 198 1-212 43-323 (741)
135 2ojh_A Uncharacterized protein 99.7 3.5E-16 1.2E-20 156.5 18.6 183 1-187 91-291 (297)
136 3vgz_A Uncharacterized protein 99.7 3.8E-15 1.3E-19 154.6 26.0 196 1-213 95-306 (353)
137 1ri6_A Putative isomerase YBHE 99.7 1.3E-15 4.5E-20 156.8 22.2 196 1-210 44-262 (343)
138 1nir_A Nitrite reductase; hemo 99.7 1.4E-15 4.7E-20 171.6 24.2 197 1-215 144-360 (543)
139 3u4y_A Uncharacterized protein 99.7 2.6E-15 8.8E-20 155.2 23.1 197 1-210 90-304 (331)
140 1pby_B Quinohemoprotein amine 99.7 2.7E-15 9.4E-20 154.0 22.6 193 1-216 40-316 (337)
141 1pby_B Quinohemoprotein amine 99.7 5.5E-15 1.9E-19 151.8 22.7 145 7-154 2-164 (337)
142 1xfd_A DIP, dipeptidyl aminope 99.7 3.1E-16 1.1E-20 180.3 14.2 198 1-212 23-291 (723)
143 1jmx_B Amine dehydrogenase; ox 99.7 3.9E-15 1.3E-19 153.9 20.5 151 1-155 6-177 (349)
144 1ri6_A Putative isomerase YBHE 99.7 3.9E-15 1.3E-19 153.3 20.2 189 7-210 5-209 (343)
145 1nir_A Nitrite reductase; hemo 99.6 1.5E-14 5.2E-19 163.1 26.1 193 1-210 185-402 (543)
146 1jmx_B Amine dehydrogenase; ox 99.6 4.2E-15 1.4E-19 153.7 18.6 193 1-216 49-331 (349)
147 3hfq_A Uncharacterized protein 99.6 2.2E-14 7.5E-19 149.8 24.1 197 1-209 92-316 (347)
148 3scy_A Hypothetical bacterial 99.6 1.3E-13 4.6E-18 144.8 25.0 194 5-209 108-336 (361)
149 3hfq_A Uncharacterized protein 99.6 5.7E-14 2E-18 146.6 21.6 195 1-209 46-270 (347)
150 1k32_A Tricorn protease; prote 99.6 2.3E-14 7.9E-19 173.1 21.2 174 1-185 302-489 (1045)
151 1xfd_A DIP, dipeptidyl aminope 99.6 2.4E-14 8.2E-19 164.6 18.6 179 1-185 67-323 (723)
152 2z3z_A Dipeptidyl aminopeptida 99.6 2E-14 6.8E-19 165.1 17.3 181 1-185 127-373 (706)
153 2z3z_A Dipeptidyl aminopeptida 99.6 3.1E-14 1E-18 163.6 17.5 177 1-185 88-329 (706)
154 2ecf_A Dipeptidyl peptidase IV 99.6 2.5E-14 8.4E-19 165.1 16.5 178 1-185 158-397 (741)
155 1k32_A Tricorn protease; prote 99.6 2.4E-14 8.3E-19 172.9 16.8 198 1-210 251-461 (1045)
156 4a5s_A Dipeptidyl peptidase 4 99.5 3.6E-14 1.2E-18 165.2 16.2 198 1-212 23-296 (740)
157 1jof_A Carboxy-CIS,CIS-muconat 99.5 4.2E-13 1.4E-17 142.3 22.7 198 1-210 89-341 (365)
158 3o4h_A Acylamino-acid-releasin 99.5 8.1E-14 2.8E-18 156.8 17.9 188 1-211 28-228 (582)
159 3scy_A Hypothetical bacterial 99.5 9.6E-13 3.3E-17 138.3 24.6 196 1-210 56-291 (361)
160 3o4h_A Acylamino-acid-releasin 99.5 5.5E-14 1.9E-18 158.2 16.0 184 1-208 71-274 (582)
161 3pe7_A Oligogalacturonate lyas 99.5 7.3E-13 2.5E-17 139.8 23.3 197 1-211 42-274 (388)
162 1jof_A Carboxy-CIS,CIS-muconat 99.5 6.3E-13 2.1E-17 140.9 21.9 200 1-209 46-290 (365)
163 1z68_A Fibroblast activation p 99.5 2.7E-14 9.2E-19 164.6 10.5 177 1-184 66-328 (719)
164 1z68_A Fibroblast activation p 99.5 4.9E-14 1.7E-18 162.4 12.5 178 1-184 22-269 (719)
165 3fvz_A Peptidyl-glycine alpha- 99.5 2.2E-12 7.4E-17 135.1 23.5 202 1-211 30-278 (329)
166 1q7f_A NHL, brain tumor CG1071 99.5 6.3E-12 2.1E-16 127.6 25.8 189 4-212 87-282 (286)
167 4a5s_A Dipeptidyl peptidase 4 99.4 1.9E-12 6.7E-17 150.5 18.3 178 2-183 69-334 (740)
168 3pe7_A Oligogalacturonate lyas 99.4 1.5E-11 5.1E-16 129.7 20.6 202 1-210 87-329 (388)
169 1q7f_A NHL, brain tumor CG1071 99.4 7.1E-11 2.4E-15 119.7 24.7 189 1-208 36-236 (286)
170 2dg1_A DRP35, lactonase; beta 99.4 9.5E-11 3.2E-15 121.4 26.0 194 1-209 51-262 (333)
171 3e5z_A Putative gluconolactona 99.4 4.9E-11 1.7E-15 121.9 21.8 187 1-209 34-245 (296)
172 3c5m_A Oligogalacturonate lyas 99.4 6E-12 2.1E-16 132.4 14.9 198 1-210 42-273 (396)
173 3azo_A Aminopeptidase; POP fam 99.3 1.4E-11 4.7E-16 140.3 17.1 179 2-185 31-259 (662)
174 3fvz_A Peptidyl-glycine alpha- 99.3 6E-11 2.1E-15 124.0 20.6 192 1-209 97-321 (329)
175 3azo_A Aminopeptidase; POP fam 99.3 1.9E-11 6.5E-16 139.2 17.6 165 1-173 136-341 (662)
176 3c5m_A Oligogalacturonate lyas 99.3 7.3E-12 2.5E-16 131.8 12.7 198 2-210 88-329 (396)
177 2xdw_A Prolyl endopeptidase; a 99.3 1.4E-10 4.7E-15 134.2 22.5 173 1-179 131-347 (710)
178 2gop_A Trilobed protease; beta 99.3 7.9E-11 2.7E-15 122.3 18.0 177 1-209 65-290 (347)
179 1xip_A Nucleoporin NUP159; bet 99.3 9E-11 3.1E-15 126.8 18.9 170 1-186 44-232 (388)
180 2oiz_A Aromatic amine dehydrog 99.3 2.7E-10 9.4E-15 121.2 21.7 175 1-180 56-360 (361)
181 1rwi_B Serine/threonine-protei 99.3 5.7E-10 2E-14 111.5 22.2 191 1-210 73-264 (270)
182 3no2_A Uncharacterized protein 99.2 3.3E-10 1.1E-14 116.4 20.2 171 4-185 3-182 (276)
183 2oiz_A Aromatic amine dehydrog 99.2 4.7E-10 1.6E-14 119.4 21.3 110 4-118 13-146 (361)
184 3no2_A Uncharacterized protein 99.2 1E-09 3.4E-14 112.8 22.6 200 2-210 44-261 (276)
185 2bkl_A Prolyl endopeptidase; m 99.2 2.9E-10 9.8E-15 131.3 19.7 191 1-209 127-348 (695)
186 2dg1_A DRP35, lactonase; beta 99.2 2.6E-10 8.9E-15 118.0 17.3 188 1-209 12-212 (333)
187 3dsm_A Uncharacterized protein 99.2 6.8E-10 2.3E-14 116.3 19.6 191 1-209 90-301 (328)
188 2xdw_A Prolyl endopeptidase; a 99.2 2.5E-09 8.6E-14 123.6 24.8 198 1-210 177-414 (710)
189 1rwi_B Serine/threonine-protei 99.2 2E-09 6.8E-14 107.5 20.8 190 1-210 30-222 (270)
190 3dsm_A Uncharacterized protein 99.2 1.9E-09 6.4E-14 112.9 21.2 183 6-210 54-253 (328)
191 1qks_A Cytochrome CD1 nitrite 99.1 6.6E-09 2.3E-13 117.7 25.9 188 6-211 167-374 (567)
192 3e5z_A Putative gluconolactona 99.1 2.7E-09 9.2E-14 108.9 20.1 174 1-185 75-274 (296)
193 2z2n_A Virginiamycin B lyase; 99.1 2.3E-08 7.8E-13 100.6 26.0 187 2-208 64-253 (299)
194 2z2n_A Virginiamycin B lyase; 99.1 2.7E-08 9.2E-13 100.1 26.5 188 2-208 22-211 (299)
195 2gop_A Trilobed protease; beta 99.1 3.9E-09 1.3E-13 109.5 19.9 158 1-177 110-311 (347)
196 1yr2_A Prolyl oligopeptidase; 99.1 2.6E-09 8.7E-14 124.3 20.6 188 1-208 169-391 (741)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 1.4E-08 4.9E-13 103.5 21.0 191 1-209 24-255 (314)
198 2bkl_A Prolyl endopeptidase; m 99.0 3.6E-09 1.2E-13 122.1 18.5 197 1-210 174-397 (695)
199 1qks_A Cytochrome CD1 nitrite 99.0 7.5E-08 2.6E-12 109.1 27.8 194 1-210 203-421 (567)
200 2qc5_A Streptogramin B lactona 99.0 1.3E-07 4.5E-12 95.1 26.4 187 2-208 69-258 (300)
201 2qc5_A Streptogramin B lactona 99.0 1.5E-07 5.1E-12 94.7 26.5 188 2-208 27-216 (300)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 4.2E-08 1.4E-12 99.9 21.6 188 2-209 78-298 (314)
203 3hrp_A Uncharacterized protein 98.9 8.7E-08 3E-12 103.9 22.0 188 1-208 137-352 (409)
204 2ghs_A AGR_C_1268P; regucalcin 98.9 2.7E-07 9.2E-12 96.3 24.8 186 1-208 55-258 (326)
205 3dr2_A Exported gluconolactona 98.9 4.8E-08 1.7E-12 100.6 18.7 173 1-182 51-253 (305)
206 3g4e_A Regucalcin; six bladed 98.9 2.2E-07 7.6E-12 95.3 23.3 191 1-210 19-229 (297)
207 3g4e_A Regucalcin; six bladed 98.9 2.8E-07 9.5E-12 94.6 23.5 177 1-184 60-258 (297)
208 2mad_H Methylamine dehydrogena 98.9 7E-07 2.4E-11 95.6 27.0 194 1-216 72-356 (373)
209 3iuj_A Prolyl endopeptidase; h 98.8 7.3E-08 2.5E-12 111.4 19.2 176 1-185 135-343 (693)
210 3hrp_A Uncharacterized protein 98.8 3.2E-07 1.1E-11 99.4 22.8 191 1-207 177-407 (409)
211 1yr2_A Prolyl oligopeptidase; 98.8 1.7E-07 5.9E-12 108.8 21.9 198 1-210 215-441 (741)
212 1xip_A Nucleoporin NUP159; bet 98.8 3E-08 1E-12 107.1 14.3 124 5-140 96-231 (388)
213 2qe8_A Uncharacterized protein 98.8 2.4E-07 8.1E-12 97.4 19.8 182 1-185 73-308 (343)
214 2ghs_A AGR_C_1268P; regucalcin 98.8 8.5E-07 2.9E-11 92.5 23.8 171 2-183 97-287 (326)
215 2hz6_A Endoplasmic reticulum t 98.7 2E-09 6.9E-14 115.0 2.3 189 5-216 8-198 (369)
216 3sjl_D Methylamine dehydrogena 98.7 8E-07 2.7E-11 95.7 20.5 146 2-153 40-208 (386)
217 2iwa_A Glutamine cyclotransfer 98.7 2.5E-06 8.5E-11 87.3 23.0 192 1-210 27-237 (266)
218 3iuj_A Prolyl endopeptidase; h 98.7 1.1E-06 3.8E-11 101.5 21.9 195 1-210 181-405 (693)
219 3dr2_A Exported gluconolactona 98.6 5E-07 1.7E-11 92.9 15.7 173 1-185 92-294 (305)
220 3c75_H MADH, methylamine dehyd 98.6 8.1E-07 2.8E-11 97.0 18.1 112 4-119 82-216 (426)
221 2mad_H Methylamine dehydrogena 98.6 2.7E-06 9.3E-11 91.0 21.1 149 1-155 131-352 (373)
222 2qe8_A Uncharacterized protein 98.6 4.7E-07 1.6E-11 95.0 14.9 193 1-208 23-276 (343)
223 2ece_A 462AA long hypothetical 98.5 3.8E-06 1.3E-10 91.7 20.5 192 4-209 93-351 (462)
224 1yiq_A Quinohemoprotein alcoho 98.5 3.2E-06 1.1E-10 97.9 19.7 178 2-181 242-531 (689)
225 1mda_H Methylamine dehydrogena 98.5 1E-06 3.5E-11 94.4 14.0 173 1-177 71-366 (368)
226 1kb0_A Quinohemoprotein alcoho 98.5 4.3E-06 1.5E-10 96.5 20.3 178 2-181 250-533 (677)
227 3nol_A Glutamine cyclotransfer 98.5 6.1E-06 2.1E-10 84.0 18.7 172 2-182 50-239 (262)
228 3sjl_D Methylamine dehydrogena 98.5 6E-06 2.1E-10 88.9 19.6 197 1-219 143-372 (386)
229 2ece_A 462AA long hypothetical 98.4 8.6E-06 2.9E-10 89.0 20.2 181 2-185 145-398 (462)
230 1fwx_A Nitrous oxide reductase 98.4 5.7E-06 2E-10 93.2 18.7 193 4-210 99-361 (595)
231 1npe_A Nidogen, entactin; glyc 98.4 0.00017 5.9E-09 72.2 27.5 191 1-210 42-238 (267)
232 1npe_A Nidogen, entactin; glyc 98.4 9.8E-05 3.4E-09 74.0 24.9 187 6-209 1-197 (267)
233 3c75_H MADH, methylamine dehyd 98.3 1.7E-05 5.9E-10 86.5 19.5 153 1-155 183-404 (426)
234 1mda_H Methylamine dehydrogena 98.3 8.8E-06 3E-10 87.2 16.7 91 17-111 47-157 (368)
235 3nok_A Glutaminyl cyclase; bet 98.3 4E-05 1.4E-09 78.1 20.2 168 6-182 65-249 (268)
236 2fp8_A Strictosidine synthase; 98.3 0.00013 4.5E-09 75.3 24.0 179 1-185 25-246 (322)
237 3mbr_X Glutamine cyclotransfer 98.3 9.7E-05 3.3E-09 74.4 21.6 169 6-182 31-218 (243)
238 2hz6_A Endoplasmic reticulum t 98.2 1.5E-07 5.1E-12 100.4 0.4 145 3-155 46-194 (369)
239 1fwx_A Nitrous oxide reductase 98.2 5E-06 1.7E-10 93.6 11.5 183 4-189 145-409 (595)
240 1kb0_A Quinohemoprotein alcoho 98.1 6.4E-05 2.2E-09 86.7 19.1 197 6-219 174-516 (677)
241 1yiq_A Quinohemoprotein alcoho 98.1 0.00013 4.4E-09 84.4 20.0 102 15-117 182-343 (689)
242 2xe4_A Oligopeptidase B; hydro 98.1 0.00018 6E-09 83.9 21.3 148 1-153 180-354 (751)
243 2fp8_A Strictosidine synthase; 98.0 0.00025 8.5E-09 73.2 20.1 188 2-209 87-312 (322)
244 2p4o_A Hypothetical protein; p 98.0 0.0012 4.3E-08 67.5 25.0 175 1-184 38-228 (306)
245 3amr_A 3-phytase; beta-propell 98.0 0.00065 2.2E-08 71.8 22.2 193 5-209 39-262 (355)
246 2iwa_A Glutamine cyclotransfer 98.0 0.00043 1.5E-08 70.7 20.3 173 27-218 10-189 (266)
247 1ijq_A LDL receptor, low-densi 98.0 0.0033 1.1E-07 65.0 26.9 185 8-209 3-194 (316)
248 3qqz_A Putative uncharacterize 98.0 0.0014 4.8E-08 66.4 23.3 181 1-185 33-241 (255)
249 3hxj_A Pyrrolo-quinoline quino 97.9 0.00021 7.3E-09 72.7 17.2 137 6-153 107-244 (330)
250 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.00064 2.2E-08 71.3 21.1 144 5-156 52-210 (376)
251 1ijq_A LDL receptor, low-densi 97.9 0.0062 2.1E-07 62.9 27.7 174 1-176 36-217 (316)
252 1kv9_A Type II quinohemoprotei 97.9 0.00021 7.2E-09 82.2 17.9 153 2-155 237-490 (668)
253 3nok_A Glutaminyl cyclase; bet 97.9 0.00061 2.1E-08 69.3 19.1 171 27-217 44-217 (268)
254 2ad6_A Methanol dehydrogenase 97.9 0.00046 1.6E-08 77.9 20.2 139 17-156 273-497 (571)
255 2p4o_A Hypothetical protein; p 97.9 0.0013 4.6E-08 67.3 22.1 179 1-184 78-274 (306)
256 3hxj_A Pyrrolo-quinoline quino 97.8 0.00034 1.2E-08 71.2 16.3 160 5-180 147-307 (330)
257 3nol_A Glutamine cyclotransfer 97.8 0.00068 2.3E-08 68.9 17.9 170 28-217 33-208 (262)
258 1flg_A Protein (quinoprotein e 97.8 0.00097 3.3E-08 75.5 21.3 141 16-157 291-520 (582)
259 3v65_B Low-density lipoprotein 97.8 0.0052 1.8E-07 65.6 25.3 184 8-209 89-276 (386)
260 3v64_C Agrin; beta propeller, 97.7 0.014 5E-07 61.2 26.5 169 2-175 80-253 (349)
261 3v64_C Agrin; beta propeller, 97.7 0.012 4.2E-07 61.7 25.9 184 8-209 46-233 (349)
262 3sov_A LRP-6, low-density lipo 97.7 0.0043 1.5E-07 64.6 21.9 185 8-209 6-196 (318)
263 3q7m_A Lipoprotein YFGL, BAMB; 97.7 0.0011 3.8E-08 69.4 17.6 136 6-151 239-376 (376)
264 3v65_B Low-density lipoprotein 97.7 0.012 4.2E-07 62.6 25.8 188 2-207 123-315 (386)
265 3p5b_L Low density lipoprotein 97.6 0.022 7.5E-07 61.1 27.7 185 8-209 85-276 (400)
266 2xe4_A Oligopeptidase B; hydro 97.6 0.0013 4.4E-08 76.6 19.2 135 39-177 175-329 (751)
267 3mbr_X Glutamine cyclotransfer 97.6 0.0064 2.2E-07 61.0 21.5 170 27-217 10-186 (243)
268 3p5b_L Low density lipoprotein 97.6 0.042 1.4E-06 58.8 28.9 172 2-175 119-298 (400)
269 2p9w_A MAL S 1 allergenic prot 97.6 0.0072 2.5E-07 63.4 21.9 152 2-154 20-216 (334)
270 1w6s_A Methanol dehydrogenase 97.5 0.005 1.7E-07 69.9 21.7 153 4-157 250-507 (599)
271 3tc9_A Hypothetical hydrolase; 97.5 0.0022 7.6E-08 69.6 17.8 150 1-153 143-301 (430)
272 3sov_A LRP-6, low-density lipo 97.5 0.03 1E-06 58.1 25.4 189 2-208 42-236 (318)
273 4hw6_A Hypothetical protein, I 97.5 0.0059 2E-07 66.4 20.5 149 1-153 145-304 (433)
274 1k3i_A Galactose oxidase precu 97.5 0.0016 5.5E-08 74.4 16.5 182 3-187 251-530 (656)
275 1k3i_A Galactose oxidase precu 97.5 0.0011 3.9E-08 75.7 15.2 150 2-154 193-379 (656)
276 2ad6_A Methanol dehydrogenase 97.4 0.0046 1.6E-07 69.7 19.2 113 6-120 160-343 (571)
277 3qqz_A Putative uncharacterize 97.4 0.027 9.2E-07 56.9 22.5 142 38-181 27-186 (255)
278 1kv9_A Type II quinohemoprotei 97.3 0.011 3.8E-07 67.8 21.3 148 6-156 66-282 (668)
279 3m0c_C LDL receptor, low-densi 97.3 0.067 2.3E-06 62.6 27.6 152 2-154 431-590 (791)
280 3m0c_C LDL receptor, low-densi 97.2 0.061 2.1E-06 63.0 26.4 169 8-182 397-572 (791)
281 1w6s_A Methanol dehydrogenase 97.2 0.011 3.9E-07 67.0 19.4 149 6-156 62-290 (599)
282 3tc9_A Hypothetical hydrolase; 97.2 0.008 2.7E-07 65.2 17.3 139 40-184 139-286 (430)
283 2p9w_A MAL S 1 allergenic prot 97.2 0.013 4.6E-07 61.3 18.0 156 42-209 17-214 (334)
284 4a2l_A BT_4663, two-component 97.2 0.04 1.4E-06 64.1 24.1 171 5-185 320-515 (795)
285 4a2l_A BT_4663, two-component 97.2 0.06 2E-06 62.6 25.4 172 4-184 272-468 (795)
286 3kya_A Putative phosphatase; s 97.1 0.022 7.5E-07 63.0 20.0 152 1-153 145-341 (496)
287 1flg_A Protein (quinoprotein e 97.1 0.0067 2.3E-07 68.6 16.2 78 59-138 465-544 (582)
288 4a0p_A LRP6, LRP-6, low-densit 97.1 0.16 5.4E-06 57.9 27.2 170 2-177 44-217 (628)
289 2xbg_A YCF48-like protein; pho 97.1 0.039 1.3E-06 57.1 20.4 150 26-182 151-307 (327)
290 3sre_A PON1, serum paraoxonase 97.0 0.086 2.9E-06 55.8 22.3 167 14-183 81-282 (355)
291 4a0p_A LRP6, LRP-6, low-densit 97.0 0.15 5.2E-06 58.0 25.9 171 7-183 7-181 (628)
292 2oxj_A Hybrid alpha/beta pepti 96.9 0.00093 3.2E-08 44.8 4.0 29 620-648 3-31 (34)
293 3s94_A LRP-6, low-density lipo 96.9 0.14 4.8E-06 58.2 24.9 171 8-182 11-185 (619)
294 4hw6_A Hypothetical protein, I 96.9 0.025 8.5E-07 61.4 17.8 150 2-152 235-432 (433)
295 3v9f_A Two-component system se 96.8 0.066 2.3E-06 62.0 21.6 163 9-181 376-552 (781)
296 3kya_A Putative phosphatase; s 96.8 0.035 1.2E-06 61.4 17.9 141 40-182 141-324 (496)
297 3v9f_A Two-component system se 96.8 0.11 3.7E-06 60.2 23.0 171 5-185 417-600 (781)
298 3m48_A General control protein 96.8 0.0013 4.5E-08 43.9 3.8 29 620-648 2-30 (33)
299 1n7d_A LDL receptor, low-densi 96.7 0.0049 1.7E-07 71.3 11.1 151 2-154 413-572 (699)
300 3ei3_A DNA damage-binding prot 96.5 0.083 2.8E-06 64.4 20.5 179 16-210 807-999 (1158)
301 3s94_A LRP-6, low-density lipo 96.5 0.35 1.2E-05 54.9 24.5 152 2-154 47-203 (619)
302 1n7d_A LDL receptor, low-densi 96.5 0.004 1.4E-07 72.0 8.1 179 14-209 384-570 (699)
303 3pbp_A Nucleoporin NUP82; beta 96.3 0.21 7E-06 54.1 19.5 141 5-149 31-208 (452)
304 3c3g_A Alpha/beta peptide with 96.3 0.0045 1.6E-07 41.2 4.0 29 620-648 2-30 (33)
305 3s25_A Hypothetical 7-bladed b 96.3 0.18 6.1E-06 51.9 18.6 176 2-201 60-255 (302)
306 3amr_A 3-phytase; beta-propell 96.2 0.24 8.2E-06 52.2 19.3 138 15-154 98-264 (355)
307 3c3f_A Alpha/beta peptide with 96.2 0.005 1.7E-07 41.2 4.0 29 620-648 3-31 (34)
308 2ism_A Putative oxidoreductase 96.2 0.18 6.3E-06 52.7 18.7 181 1-185 81-332 (352)
309 2xbg_A YCF48-like protein; pho 96.2 0.12 4.2E-06 53.3 17.0 143 2-151 170-320 (327)
310 3s9g_A Protein hexim1; cyclin 96.2 0.021 7.2E-07 48.0 8.4 25 622-646 62-86 (104)
311 2ism_A Putative oxidoreductase 96.2 0.25 8.7E-06 51.6 19.2 139 1-142 37-222 (352)
312 3sre_A PON1, serum paraoxonase 95.9 0.28 9.5E-06 51.8 18.0 161 15-182 138-328 (355)
313 2bni_A General control protein 95.8 0.0098 3.3E-07 40.0 4.0 29 620-648 3-31 (34)
314 1uo4_A General control protein 95.8 0.01 3.4E-07 39.9 3.9 29 620-648 3-31 (34)
315 2vpj_A Kelch-like protein 12; 95.8 0.39 1.3E-05 48.1 18.1 142 5-154 62-232 (301)
316 3a9g_A Putative uncharacterize 95.7 1.2 4.2E-05 46.5 22.1 142 41-185 138-329 (354)
317 3pbp_A Nucleoporin NUP82; beta 95.6 0.68 2.3E-05 50.1 19.7 128 47-179 30-191 (452)
318 3s25_A Hypothetical 7-bladed b 95.4 0.83 2.8E-05 46.9 19.1 161 2-185 21-201 (302)
319 3ii7_A Kelch-like protein 7; p 95.2 0.51 1.8E-05 47.5 16.6 143 5-154 55-226 (306)
320 1bpo_A Protein (clathrin); cla 95.1 4.7 0.00016 43.7 26.7 167 3-178 74-311 (494)
321 2xn4_A Kelch-like protein 2; s 95.1 0.74 2.5E-05 46.2 17.2 141 5-154 61-230 (302)
322 1tl2_A L10, protein (tachylect 95.0 0.46 1.6E-05 47.0 14.7 134 6-149 4-159 (236)
323 3a9g_A Putative uncharacterize 94.9 0.4 1.4E-05 50.3 15.2 143 38-185 29-215 (354)
324 2wq1_A General control protein 94.9 0.033 1.1E-06 37.1 4.0 29 620-648 2-30 (33)
325 1cru_A Protein (soluble quinop 94.7 0.83 2.9E-05 49.7 17.6 101 1-101 33-163 (454)
326 3ei3_A DNA damage-binding prot 94.7 6.8 0.00023 47.7 27.1 147 2-152 469-635 (1158)
327 3das_A Putative oxidoreductase 94.6 0.72 2.5E-05 48.5 16.1 139 1-140 38-219 (347)
328 2xzh_A Clathrin heavy chain 1; 94.6 5.1 0.00018 41.9 26.9 166 3-177 75-311 (365)
329 1kd8_B GABH BLL, GCN4 acid bas 94.6 0.041 1.4E-06 37.4 4.0 29 620-648 3-31 (36)
330 2oqq_A Transcription factor HY 94.5 0.064 2.2E-06 37.9 5.1 35 614-648 6-40 (42)
331 3mq7_A Bone marrow stromal ant 94.5 0.44 1.5E-05 41.4 11.4 68 577-644 28-104 (121)
332 2zwa_A Leucine carboxyl methyl 94.5 0.86 3E-05 52.3 17.8 148 5-155 397-579 (695)
333 2g8s_A Glucose/sorbosone dehyd 94.5 0.42 1.4E-05 50.0 14.0 139 1-140 24-214 (353)
334 2r2v_A GCN4 leucine zipper; co 94.5 0.047 1.6E-06 36.7 4.0 29 620-648 3-31 (34)
335 1t2k_D Cyclic-AMP-dependent tr 94.4 0.058 2E-06 42.1 5.4 36 613-648 24-59 (61)
336 1gu4_A CAAT/enhancer binding p 94.4 0.078 2.7E-06 43.5 6.2 37 612-648 37-73 (78)
337 1ci6_A Transcription factor AT 94.4 0.067 2.3E-06 42.1 5.6 36 613-648 25-60 (63)
338 2hy6_A General control protein 94.2 0.04 1.4E-06 37.0 3.2 29 620-648 3-31 (34)
339 1tl2_A L10, protein (tachylect 94.1 0.72 2.5E-05 45.6 13.6 138 1-147 47-204 (236)
340 2vpj_A Kelch-like protein 12; 94.1 0.57 2E-05 46.9 13.5 140 5-154 112-279 (301)
341 1kd8_A GABH AIV, GCN4 acid bas 94.0 0.043 1.5E-06 37.3 3.2 29 620-648 3-31 (36)
342 2xn4_A Kelch-like protein 2; s 94.0 0.61 2.1E-05 46.8 13.6 141 5-154 108-277 (302)
343 1hjb_A Ccaat/enhancer binding 94.0 0.08 2.7E-06 44.3 5.6 36 613-648 38-73 (87)
344 4asc_A Kelch repeat and BTB do 93.5 1.6 5.5E-05 44.0 15.9 143 4-154 44-222 (315)
345 1jnm_A Proto-oncogene C-JUN; B 93.4 0.078 2.7E-06 41.5 4.2 36 613-648 24-59 (62)
346 2woz_A Kelch repeat and BTB do 93.3 2.4 8.1E-05 42.8 16.8 143 4-154 55-232 (318)
347 1cru_A Protein (soluble quinop 93.3 2.3 7.9E-05 46.1 17.6 102 39-141 28-162 (454)
348 1zgk_A Kelch-like ECH-associat 93.2 1.2 4.1E-05 44.9 14.3 140 5-154 70-241 (308)
349 2be1_A Serine/threonine-protei 93.1 0.13 4.6E-06 54.0 6.9 143 7-150 11-181 (339)
350 3ott_A Two-component system se 93.1 12 0.0004 42.8 24.1 160 8-181 75-245 (758)
351 4asc_A Kelch repeat and BTB do 93.0 4.2 0.00014 40.8 18.0 139 8-154 7-175 (315)
352 3ii7_A Kelch-like protein 7; p 92.9 3.4 0.00011 41.3 17.1 140 8-154 14-179 (306)
353 2xzh_A Clathrin heavy chain 1; 92.8 3.4 0.00012 43.2 16.8 139 59-209 48-188 (365)
354 2g8s_A Glucose/sorbosone dehyd 92.7 2.1 7.3E-05 44.5 15.6 143 40-185 20-215 (353)
355 3sbq_A Nitrous-oxide reductase 92.6 1.5 5.2E-05 48.9 14.6 115 40-154 325-479 (638)
356 3s9g_A Protein hexim1; cyclin 92.6 1.1 3.9E-05 37.6 10.2 33 615-647 62-94 (104)
357 2wuj_A Septum site-determining 92.2 0.17 5.8E-06 38.9 4.6 36 613-648 22-57 (57)
358 2wt7_A Proto-oncogene protein 91.8 0.25 8.7E-06 38.7 5.4 35 614-648 26-60 (63)
359 1zgk_A Kelch-like ECH-associat 91.8 1.2 4.1E-05 44.9 12.1 141 5-154 121-288 (308)
360 2woz_A Kelch repeat and BTB do 91.6 1.7 6E-05 43.8 13.1 143 5-154 109-288 (318)
361 2dgc_A Protein (GCN4); basic d 91.5 0.21 7.2E-06 39.2 4.5 43 603-648 18-60 (63)
362 3das_A Putative oxidoreductase 91.5 4.1 0.00014 42.7 16.0 109 77-185 27-157 (347)
363 3q4f_C DNA repair protein XRCC 91.5 0.21 7.3E-06 46.8 5.2 31 616-646 152-182 (186)
364 2uvk_A YJHT; unknown function, 91.4 3.7 0.00013 42.0 15.6 94 60-154 168-295 (357)
365 1dh3_A Transcription factor CR 91.4 0.24 8.1E-06 37.8 4.6 29 620-648 24-52 (55)
366 3ott_A Two-component system se 91.2 21 0.00073 40.6 23.2 164 8-181 114-292 (758)
367 3i00_A HIP-I, huntingtin-inter 91.1 2.2 7.4E-05 37.8 11.2 56 592-647 25-83 (120)
368 1t6f_A Geminin; coiled-coil, c 91.0 0.33 1.1E-05 33.0 4.3 21 627-647 16-36 (37)
369 1bpo_A Protein (clathrin); cla 90.3 5.8 0.0002 43.0 15.8 139 59-209 47-187 (494)
370 2uvk_A YJHT; unknown function, 90.2 2.6 9E-05 43.1 12.9 137 16-155 168-344 (357)
371 3w03_C DNA repair protein XRCC 90.0 0.33 1.1E-05 46.1 5.2 29 618-646 145-173 (184)
372 2zwa_A Leucine carboxyl methyl 89.3 1.8 6E-05 49.7 11.8 146 5-154 451-636 (695)
373 3sbq_A Nitrous-oxide reductase 89.3 25 0.00087 39.2 20.2 191 4-209 140-407 (638)
374 2yy0_A C-MYC-binding protein; 89.2 0.21 7.2E-06 37.8 2.6 45 603-647 4-48 (53)
375 3iv1_A Tumor susceptibility ge 89.2 5 0.00017 32.6 10.8 34 615-648 43-76 (78)
376 2l5g_A GPS2 protein, G protein 88.5 0.58 2E-05 32.2 4.0 31 615-645 5-35 (38)
377 2jee_A YIIU; FTSZ, septum, coi 88.4 1.1 3.8E-05 36.7 6.5 10 637-646 53-62 (81)
378 3b7f_A Glycosyl hydrolase, BNR 88.4 26 0.00087 36.3 22.3 139 7-149 23-204 (394)
379 1uii_A Geminin; human, DNA rep 87.9 1.6 5.6E-05 35.7 7.2 21 627-647 55-75 (83)
380 2p22_A Suppressor protein STP2 87.5 2.9 9.8E-05 39.4 9.7 66 579-644 17-89 (174)
381 3oja_A Leucine-rich immune mol 87.0 1 3.4E-05 49.3 7.5 33 615-647 425-457 (487)
382 1go4_E MAD1 (mitotic arrest de 86.3 0.59 2E-05 40.0 3.9 22 625-646 12-33 (100)
383 1x79_B RAB GTPase binding effe 86.3 2.5 8.4E-05 36.9 7.9 67 579-645 28-104 (112)
384 1xi4_A Clathrin heavy chain; a 86.1 19 0.00064 44.7 18.0 92 2-99 73-168 (1630)
385 1nfn_A Apolipoprotein E3; lipi 85.7 0.94 3.2E-05 43.5 5.6 68 580-647 90-158 (191)
386 1kd8_A GABH AIV, GCN4 acid bas 85.5 1.6 5.4E-05 29.7 4.8 29 614-642 4-32 (36)
387 1p9i_A Cortexillin I/GCN4 hybr 85.4 0.81 2.8E-05 29.1 3.2 26 620-645 1-26 (31)
388 1ez3_A Syntaxin-1A; three heli 85.0 3.7 0.00012 36.1 8.8 61 583-644 17-80 (127)
389 1wt6_A Myotonin-protein kinase 84.9 7.5 0.00025 31.7 9.5 28 619-646 46-73 (81)
390 1dip_A Delta-sleep-inducing pe 84.5 1.2 4.1E-05 35.5 4.5 28 620-647 17-44 (78)
391 1nkp_B MAX protein, MYC proto- 83.0 1.1 3.7E-05 37.0 4.0 24 624-647 53-76 (83)
392 2w6a_A ARF GTPase-activating p 82.9 4.9 0.00017 30.6 7.1 28 619-646 35-62 (63)
393 1wlq_A Geminin; coiled-coil; 2 82.6 3.4 0.00012 33.8 6.7 19 628-646 48-66 (83)
394 1nlw_A MAD protein, MAX dimeri 82.6 1.2 4E-05 36.7 4.0 22 626-647 55-76 (80)
395 3b7f_A Glycosyl hydrolase, BNR 82.6 48 0.0016 34.2 17.9 107 39-150 116-259 (394)
396 2oxj_A Hybrid alpha/beta pepti 82.3 2.3 7.8E-05 28.6 4.5 27 614-640 4-30 (34)
397 3nmd_A CGMP dependent protein 82.2 5.5 0.00019 31.8 7.6 30 619-648 41-70 (72)
398 3c3f_A Alpha/beta peptide with 82.0 2.4 8.1E-05 28.5 4.5 28 614-641 4-31 (34)
399 1nkp_A C-MYC, MYC proto-oncoge 81.8 3.2 0.00011 34.6 6.5 22 625-646 66-87 (88)
400 3lay_A Zinc resistance-associa 81.6 3 0.0001 39.4 7.0 39 607-645 92-133 (175)
401 3no0_A DNA gyrase subunit A; D 81.3 47 0.0016 33.2 18.5 145 5-153 79-246 (276)
402 2jn6_A Protein CGL2762, transp 81.0 1.2 4.2E-05 37.2 3.8 20 628-647 62-81 (97)
403 3vmx_A Voltage-gated hydrogen 80.9 3.4 0.00012 30.2 5.4 33 616-648 9-41 (48)
404 1uo4_A General control protein 80.6 2.8 9.7E-05 28.2 4.5 27 614-640 4-30 (34)
405 3c3g_A Alpha/beta peptide with 80.6 2.9 9.9E-05 27.9 4.5 28 614-641 3-30 (33)
406 1gd2_E Transcription factor PA 80.6 1.4 4.6E-05 35.3 3.6 23 623-645 48-70 (70)
407 2hy6_A General control protein 80.0 3.1 0.00011 28.0 4.5 27 614-640 4-30 (34)
408 3m48_A General control protein 79.8 2.2 7.4E-05 28.6 3.7 26 615-640 4-29 (33)
409 2wvr_A Geminin; DNA replicatio 79.8 4.2 0.00014 38.8 7.2 20 628-647 125-144 (209)
410 3m9b_A Proteasome-associated A 79.6 1.9 6.4E-05 42.9 5.0 24 623-646 73-96 (251)
411 1gd2_E Transcription factor PA 79.4 2.5 8.5E-05 33.8 4.7 23 624-646 42-64 (70)
412 1gu4_A CAAT/enhancer binding p 79.3 2.1 7.1E-05 35.0 4.4 27 621-647 39-65 (78)
413 1hjb_A Ccaat/enhancer binding 78.9 1.7 5.9E-05 36.2 3.8 25 622-646 40-64 (87)
414 3lay_A Zinc resistance-associa 78.8 2.8 9.6E-05 39.6 5.8 66 572-640 69-139 (175)
415 1suu_A DNA gyrase subunit A; t 78.7 60 0.0021 33.0 19.4 148 4-153 6-181 (312)
416 2bni_A General control protein 77.9 3.9 0.00013 27.6 4.5 28 614-641 4-31 (34)
417 1deb_A APC protein, adenomatou 77.9 1.4 4.9E-05 32.3 2.6 18 629-646 7-24 (54)
418 2wg5_A General control protein 76.9 1.8 6E-05 37.7 3.6 28 620-647 9-36 (109)
419 3r2p_A Apolipoprotein A-I; amp 76.7 11 0.00037 35.6 9.5 53 582-634 75-127 (185)
420 1t2k_D Cyclic-AMP-dependent tr 76.7 3.6 0.00012 31.7 4.9 28 619-646 23-50 (61)
421 3trt_A Vimentin; cytoskeleton, 76.5 21 0.0007 28.5 9.7 52 586-644 17-68 (77)
422 1nkp_A C-MYC, MYC proto-oncoge 76.5 2.3 7.9E-05 35.5 4.0 27 621-647 55-81 (88)
423 3v86_A De novo design helix; c 76.5 4.1 0.00014 25.1 4.0 22 623-644 5-26 (27)
424 1nlw_A MAD protein, MAX dimeri 76.5 5.3 0.00018 32.6 6.1 23 622-644 58-80 (80)
425 4gq2_M Nucleoporin NUP120; bet 76.3 29 0.00098 41.2 15.0 38 83-120 237-274 (950)
426 1kd8_B GABH BLL, GCN4 acid bas 76.3 6.2 0.00021 26.9 5.2 30 614-643 4-33 (36)
427 2wq1_A General control protein 76.2 4.7 0.00016 26.9 4.5 27 614-640 3-29 (33)
428 2v71_A Nuclear distribution pr 76.0 16 0.00053 34.8 10.1 33 615-647 78-110 (189)
429 2jee_A YIIU; FTSZ, septum, coi 76.0 24 0.00082 28.8 9.7 34 615-648 38-75 (81)
430 2be1_A Serine/threonine-protei 75.8 5.9 0.0002 41.3 7.9 104 52-155 12-132 (339)
431 3a2a_A Voltage-gated hydrogen 74.7 4.7 0.00016 30.2 4.7 28 621-648 21-48 (58)
432 1dh3_A Transcription factor CR 74.6 2.4 8.3E-05 32.1 3.3 22 626-647 23-44 (55)
433 4hvt_A Ritya.17583.B, post-pro 74.4 95 0.0033 35.5 18.3 175 1-178 136-360 (711)
434 3no0_A DNA gyrase subunit A; D 74.0 75 0.0026 31.7 18.5 142 8-153 37-196 (276)
435 1jnm_A Proto-oncogene C-JUN; B 73.8 4.7 0.00016 31.2 4.9 29 619-647 23-51 (62)
436 2q12_A DIP13 alpha, DCC-intera 73.7 19 0.00065 35.7 10.8 76 573-648 164-254 (265)
437 4fla_A Regulation of nuclear P 73.5 44 0.0015 30.6 12.2 69 576-644 70-143 (152)
438 1xi4_A Clathrin heavy chain; a 73.3 22 0.00075 44.1 12.8 140 58-209 46-187 (1630)
439 1wp5_A Topoisomerase IV; broke 72.8 88 0.003 32.0 16.7 147 4-153 3-174 (323)
440 2wg3_C Hedgehog-interacting pr 72.7 95 0.0033 33.4 16.9 103 1-103 20-160 (463)
441 3mq9_A Bone marrow stromal ant 72.4 15 0.0005 39.7 10.3 31 584-614 372-411 (471)
442 1fmh_A General control protein 71.6 3.2 0.00011 26.8 2.8 20 627-646 3-22 (33)
443 3oja_A Leucine-rich immune mol 71.4 22 0.00075 38.5 11.5 41 605-645 422-462 (487)
444 3uc1_A DNA gyrase subunit A; D 71.4 95 0.0033 31.8 20.9 114 38-153 96-228 (327)
445 2w83_C C-JUN-amino-terminal ki 71.3 26 0.00088 28.2 8.6 51 595-646 8-58 (77)
446 1t72_A Phosphate transport sys 71.2 6.2 0.00021 38.0 6.4 57 590-646 5-61 (227)
447 2wt7_A Proto-oncogene protein 71.1 5.9 0.0002 30.7 4.9 27 620-646 25-51 (63)
448 3ol1_A Vimentin; structural ge 69.9 51 0.0018 28.7 11.4 59 582-645 45-103 (119)
449 2r2v_A GCN4 leucine zipper; co 69.3 8.4 0.00029 25.9 4.5 27 614-640 4-30 (34)
450 1wmi_B RELB, hypothetical prot 69.1 2.9 0.0001 31.8 2.6 23 626-648 5-27 (67)
451 1gmj_A ATPase inhibitor; coile 68.8 9.6 0.00033 31.3 5.8 18 577-594 32-49 (84)
452 1go4_E MAD1 (mitotic arrest de 68.6 5.5 0.00019 34.0 4.5 35 572-607 10-44 (100)
453 3o0z_A RHO-associated protein 68.5 57 0.002 30.3 11.7 65 574-639 41-111 (168)
454 2wg3_C Hedgehog-interacting pr 68.4 59 0.002 35.1 14.1 105 82-186 14-157 (463)
455 1m1j_C Fibrinogen gamma chain; 68.4 17 0.00058 38.9 9.4 10 634-643 121-130 (409)
456 1s94_A S-syntaxin; three helix 68.2 15 0.00051 34.4 8.1 60 583-643 48-110 (180)
457 1ci6_A Transcription factor AT 67.3 6.9 0.00024 30.4 4.6 22 625-646 30-51 (63)
458 3s84_A Apolipoprotein A-IV; fo 67.2 39 0.0013 33.9 11.4 49 579-627 49-97 (273)
459 3oja_B Anopheles plasmodium-re 67.0 23 0.00079 39.2 10.7 15 629-643 562-576 (597)
460 3i00_A HIP-I, huntingtin-inter 66.8 31 0.0011 30.3 9.2 9 638-646 67-75 (120)
461 1zxa_A CGMP-dependent protein 66.4 9.6 0.00033 30.0 5.2 29 620-648 27-55 (67)
462 3twe_A Alpha4H; unknown functi 66.4 4.2 0.00014 25.1 2.4 18 628-645 4-21 (27)
463 1nkp_B MAX protein, MYC proto- 66.2 11 0.00036 30.8 5.8 22 624-645 60-81 (83)
464 3m91_A Proteasome-associated A 66.1 18 0.00063 26.9 6.4 20 625-644 30-49 (51)
465 2de0_X Alpha-(1,6)-fucosyltran 65.5 19 0.00065 39.8 9.4 72 570-642 44-130 (526)
466 2j4b_A TAF5, transcription ini 65.5 4.2 0.00014 36.8 3.5 63 574-638 10-76 (138)
467 3a7p_A Autophagy protein 16; c 65.5 40 0.0014 30.7 9.8 55 587-645 73-130 (152)
468 1gs9_A Apolipoprotein E, APOE4 65.2 10 0.00035 35.3 6.2 26 622-647 132-158 (165)
469 1zi0_A DNA gyrase subunit A; b 64.9 1.2E+02 0.0042 30.5 20.8 200 4-211 1-227 (307)
470 3oja_B Anopheles plasmodium-re 64.8 30 0.001 38.3 11.1 13 633-645 559-571 (597)
471 3s4r_A Vimentin; alpha-helix, 64.8 53 0.0018 27.4 9.9 40 609-648 54-93 (93)
472 1uii_A Geminin; human, DNA rep 64.6 13 0.00045 30.4 5.8 26 620-645 55-80 (83)
473 2dfs_A Myosin-5A; myosin-V, in 64.5 18 0.0006 43.7 9.5 18 629-646 1020-1037(1080)
474 2wt7_B Transcription factor MA 63.7 15 0.00051 30.7 6.1 37 606-646 47-83 (90)
475 1f5n_A Interferon-induced guan 63.5 42 0.0014 37.6 11.8 63 584-646 514-581 (592)
476 1zxa_A CGMP-dependent protein 62.9 7 0.00024 30.8 3.8 33 615-647 15-47 (67)
477 2v4h_A NF-kappa-B essential mo 62.7 50 0.0017 28.4 9.3 28 617-644 82-109 (110)
478 3hd7_B Syntaxin-1A; membrane p 62.5 74 0.0025 27.2 11.0 52 592-644 24-75 (109)
479 3trt_A Vimentin; cytoskeleton, 62.4 57 0.0019 25.9 10.4 22 624-645 55-76 (77)
480 2xus_A Breast cancer metastasi 62.0 17 0.00059 26.8 5.4 38 592-639 9-46 (49)
481 3s84_A Apolipoprotein A-IV; fo 61.7 57 0.002 32.7 11.4 56 579-634 71-126 (273)
482 1a93_A Coiled coil, LZ, MYC pr 61.6 6.8 0.00023 26.6 3.0 21 626-646 8-28 (34)
483 4dzn_A Coiled-coil peptide CC- 61.3 17 0.00057 23.5 4.6 22 625-646 9-30 (33)
484 2dfs_A Myosin-5A; myosin-V, in 61.3 26 0.00089 42.2 10.2 41 605-645 1003-1043(1080)
485 3q6k_A 43.2 kDa salivary prote 61.2 1.6E+02 0.0056 30.8 23.8 163 17-180 124-336 (381)
486 1am9_A Srebp-1A, protein (ster 60.9 9.1 0.00031 31.3 4.4 20 627-646 52-71 (82)
487 1bb1_B Designed, thermostable 60.5 17 0.00059 23.8 4.6 25 621-645 5-29 (36)
488 2nps_B Syntaxin 13, vesicle-as 60.2 57 0.002 25.5 8.9 53 592-645 9-61 (71)
489 3kci_A Probable E3 ubiquitin-p 59.6 1.6E+02 0.0056 30.3 21.7 143 6-153 116-293 (389)
490 1f5n_A Interferon-induced guan 59.2 22 0.00075 39.9 8.5 49 594-642 535-584 (592)
491 3mq7_A Bone marrow stromal ant 59.0 90 0.0031 27.1 11.3 25 622-646 75-99 (121)
492 3he5_A Synzip1; heterodimeric 58.8 9.3 0.00032 26.7 3.4 20 627-646 5-24 (49)
493 2dgc_A Protein (GCN4); basic d 58.3 12 0.00042 29.0 4.5 27 616-642 35-61 (63)
494 3vp9_A General transcriptional 58.1 7 0.00024 32.8 3.2 17 630-646 73-89 (92)
495 3nmd_A CGMP dependent protein 58.0 26 0.00089 28.0 6.3 21 626-646 41-61 (72)
496 3hnw_A Uncharacterized protein 57.9 36 0.0012 30.6 8.2 50 597-646 72-124 (138)
497 3m9b_A Proteasome-associated A 57.8 6.2 0.00021 39.1 3.3 23 624-646 67-89 (251)
498 3f5h_A Type I polyketide synth 56.7 37 0.0013 26.8 6.9 43 603-645 19-61 (68)
499 3kin_B Kinesin heavy chain; mo 56.0 14 0.00048 32.3 5.0 33 614-646 85-117 (117)
500 1a93_B MAX protein, coiled coi 55.9 13 0.00044 25.2 3.5 21 626-646 8-28 (34)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=4.9e-28 Score=257.47 Aligned_cols=193 Identities=11% Similarity=0.111 Sum_probs=164.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe--c
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL--K 78 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l--~ 78 (648)
+|+|+|++|++|+.||.|+|||+.+++++..+.+ |...|.+++|++++..+|++++.|++|+|||+++++. ...+ .
T Consensus 134 ~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~-h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~ 211 (344)
T 4gqb_B 134 SVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA-HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP-ASQIGCS 211 (344)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC-EEECC--
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-cCCceEEEEecCCCCCceeeeccccccccccccccce-eeeeecc
Confidence 5899999999999999999999999999999987 7788999999999977899999999999999988875 3333 3
Q ss_pred cCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCC-CEEEEEEcCCeEEEEECCCCC
Q 006360 79 QHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDD-WILTAGTSNGRVVFYDIRGKP 155 (648)
Q Consensus 79 ~H~~~V~slafsP-dg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG-~~Lasgs~DG~V~IWDl~s~~ 155 (648)
.|...+.+++|+| ++++|++|+.|+.|++||+++++++..+ .|...|.+++|+|++ ++|++|+.|+.|+|||++++
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~- 290 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS- 290 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC-
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-
Confidence 4566799999999 6788999999999999999999988776 589999999999997 57999999999999999887
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 156 ~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
+.+...+|.+.|++|+|+|+++. ++++++.|+.|++|++..
T Consensus 291 ---~~~~~~~H~~~V~~v~~sp~~~~-----------llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 291 ---ELFRSQAHRDFVRDATWSPLNHS-----------LLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp ---EEEEECCCSSCEEEEEECSSSTT-----------EEEEEETTSCEEEEECCC
T ss_pred ---cEEEEcCCCCCEEEEEEeCCCCe-----------EEEEEcCCCeEEEEECCC
Confidence 23445589999999999997543 345567799999999864
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=4e-27 Score=244.20 Aligned_cols=199 Identities=12% Similarity=0.124 Sum_probs=172.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|++++|++++.||.|+|||+.++..+..+.. |...|.+++|+++++ +|++|+.|++|++||+.+++. +..+.+|
T Consensus 20 ~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~-~~~~~~h 96 (304)
T 2ynn_A 20 DFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQV-TETPVRAGKFIARKN-WIIVGSDDFRIRVFNYNTGEK-VVDFEAH 96 (304)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGT-EEEEEETTSEEEEEETTTCCE-EEEEECC
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCceeEEeec-cCCcEEEEEEeCCCC-EEEEECCCCEEEEEECCCCcE-EEEEeCC
Confidence 5899999999999999999999999999998886 677899999999998 899999999999999998875 6778999
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCce-eeEe-eCCCCeEEEEEeC-CCCEEEEEEcCCeEEEEECCCCCCc
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP-SSCI-TYEAPFSSLAFID-DDWILTAGTSNGRVVFYDIRGKPQP 157 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~-v~~~-~h~~~I~slafsP-dG~~Lasgs~DG~V~IWDl~s~~~~ 157 (648)
...|++++|+|++.+|++|+.|++|++||++++.. ...+ .|...|.+++|+| ++.+|++|+.|+.|+|||++.....
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS
T ss_pred CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc
Confidence 99999999999999999999999999999998744 3444 6899999999999 6889999999999999999877544
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCc
Q 006360 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (648)
Q Consensus 158 ~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ 214 (648)
..... .|...|..++|.+. .++.++++++.|+.|++||++.....
T Consensus 177 ~~~~~--~~~~~v~~~~~~~~----------~~~~~l~s~s~D~~i~iWd~~~~~~~ 221 (304)
T 2ynn_A 177 FTLTT--GQERGVNYVDYYPL----------PDKPYMITASDDLTIKIWDYQTKSCV 221 (304)
T ss_dssp EEEEC--CCTTCEEEEEECCS----------TTCCEEEEEETTSEEEEEETTTTEEE
T ss_pred ceecc--CCcCcEEEEEEEEc----------CCCCEEEEEcCCCeEEEEeCCCCccc
Confidence 43333 57788999999872 24556677788999999999865443
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=3.3e-27 Score=244.78 Aligned_cols=199 Identities=14% Similarity=0.235 Sum_probs=172.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|++++++|++|+.|+.|++||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.|++|+|||+.+.......+.+|
T Consensus 62 ~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~~h 139 (304)
T 2ynn_A 62 KFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGH 139 (304)
T ss_dssp EEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEECCC
T ss_pred EEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC-CCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhhccc
Confidence 4789999999999999999999999999999986 778899999999998 89999999999999998876556778999
Q ss_pred CCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEeC--CCCEEEEEEcCCeEEEEECCCCC
Q 006360 81 SAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFID--DDWILTAGTSNGRVVFYDIRGKP 155 (648)
Q Consensus 81 ~~~V~slafsP-dg~~LaSgs~Dg~I~IWDl~tgk~v~~~--~h~~~I~slafsP--dG~~Lasgs~DG~V~IWDl~s~~ 155 (648)
...|.+++|+| ++.+|++|+.|++|++||++.+.....+ .+...+..+.|+| ++.+|++|+.|+.|+|||+++.
T Consensus 140 ~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~- 218 (304)
T 2ynn_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK- 218 (304)
T ss_dssp CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT-
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC-
Confidence 99999999999 7899999999999999999887765544 4667899999987 7889999999999999999987
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCccc
Q 006360 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (648)
Q Consensus 156 ~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss 216 (648)
.++..+. +|...|.+++|+|++++ +++++.|+.|++||+........
T Consensus 219 ~~~~~~~--~h~~~v~~~~~~p~~~~------------l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 219 SCVATLE--GHMSNVSFAVFHPTLPI------------IISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp EEEEEEE--CCSSCEEEEEECSSSSE------------EEEEETTSCEEEEETTTCCEEEE
T ss_pred ccceeeC--CCCCCEEEEEECCCCCE------------EEEEcCCCeEEEEECCCCceeee
Confidence 4445555 89999999999996555 45557799999999987655433
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=3.7e-27 Score=247.31 Aligned_cols=190 Identities=17% Similarity=0.271 Sum_probs=170.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|++++|++++.||.|++||+.+++....+.. +...|.+++|+|+++ +|++|+.|+.|+|||+.+++. +..+.+|
T Consensus 129 ~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~-~~~~v~~~~~spdg~-~lasg~~dg~i~iwd~~~~~~-~~~~~~h 205 (321)
T 3ow8_A 129 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT-RGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKL-LHTLEGH 205 (321)
T ss_dssp EECTTSSEEEEECTTSEEEEEETTTCSEEEEEEC-SSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE-EEEECCC
T ss_pred EECCCCCEEEEEcCCCcEEEEEcCCCceeEEecC-CCceEEEEEECCCCC-EEEEEcCCCeEEEEECCCCcE-EEEEccc
Confidence 4899999999999999999999999998888876 667889999999998 899999999999999998874 6788999
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~ 159 (648)
...|.+++|+|++++|++++.|+.|++||++.++....+ .|...|.+++|+|++.+|++++.|+.|+|||+++. .++.
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~-~~~~ 284 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR-TCVH 284 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-EEEE
Confidence 999999999999999999999999999999999887766 58899999999999999999999999999999987 3344
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCC
Q 006360 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (648)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDl 208 (648)
.+. +|.+.|.+++|+|++++| ++++.|+.|++||.
T Consensus 285 ~~~--~h~~~v~~v~~s~~g~~l------------~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 285 TFF--DHQDQVWGVKYNGNGSKI------------VSVGDDQEIHIYDC 319 (321)
T ss_dssp EEC--CCSSCEEEEEECTTSSEE------------EEEETTCCEEEEEC
T ss_pred EEc--CCCCcEEEEEECCCCCEE------------EEEeCCCeEEEEeC
Confidence 444 799999999999976555 44567999999996
No 5
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=8.5e-27 Score=243.63 Aligned_cols=201 Identities=15% Similarity=0.268 Sum_probs=173.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+++|++|++|+.|++|+|||+.+++.+..+.+ |...|.+++|++++. +|++|+.|++|+|||++... +..+.+|
T Consensus 72 ~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~~~--~~~~~~h 147 (319)
T 3frx_A 72 TLTADGAYALSASWDKTLRLWDVATGETYQRFVG-HKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKGQC--LATLLGH 147 (319)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSC-EEEEEETTSCEEEEETTSCE--EEEECCC
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCCeeEEEcc-CCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCe--EEEEecc
Confidence 4899999999999999999999999999999987 777899999999998 89999999999999997654 6778899
Q ss_pred CCCeEEEEEccC------CCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCC
Q 006360 81 SAPTAGISFSSD------DKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (648)
Q Consensus 81 ~~~V~slafsPd------g~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s 153 (648)
...|.+++|.|. +.+|++++.|+.|++||+++++....+ .|...|.+++|+|+|++|++|+.||.|+|||+.+
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 999999999984 458999999999999999998877655 6999999999999999999999999999999998
Q ss_pred CCCceEEEeecCCCCCeeEEEEccCCCeEEEecc-------------------------------------CCCCeEEEE
Q 006360 154 KPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETT-------------------------------------CKAETALLG 196 (648)
Q Consensus 154 ~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~-------------------------------------~~~~~~lvs 196 (648)
. +.+..+. +...|.+++|+|++.+++++.. ..++.+|++
T Consensus 228 ~-~~~~~~~---~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 303 (319)
T 3frx_A 228 K-KAMYTLS---AQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFA 303 (319)
T ss_dssp T-EEEEEEE---CCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEE
T ss_pred C-cEEEEec---CCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEE
Confidence 7 3334443 4578999999999988876421 235667788
Q ss_pred eeCCCeEEcCCCC
Q 006360 197 GAVGDSILMPDPL 209 (648)
Q Consensus 197 ~s~D~~IkvWDlr 209 (648)
++.|+.|++||+.
T Consensus 304 g~~Dg~i~vWd~~ 316 (319)
T 3frx_A 304 GYTDNVIRVWQVM 316 (319)
T ss_dssp EETTSCEEEEEEE
T ss_pred eecCceEEEEEEe
Confidence 8888888888864
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.95 E-value=5.8e-27 Score=249.18 Aligned_cols=194 Identities=18% Similarity=0.212 Sum_probs=162.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEe---CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELK---DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~---~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l 77 (648)
+|++++ +|++|+.||.|+|||+.+++.+..+. ..|...|++|+|+|+++ +|++|+.|++|+|||+.+++. +..+
T Consensus 89 ~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~~~~-~~~~ 165 (344)
T 4gqb_B 89 TWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQQVV-LSSY 165 (344)
T ss_dssp EEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE-EEEE
T ss_pred EEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcE-EEEE
Confidence 478875 68899999999999999887655433 24788999999999998 899999999999999998875 6788
Q ss_pred ccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEeCCCCceeeEee---CCCCeEEEEEeCC-CCEEEEEEcCCeEEEEECC
Q 006360 78 KQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCIT---YEAPFSSLAFIDD-DWILTAGTSNGRVVFYDIR 152 (648)
Q Consensus 78 ~~H~~~V~slafsPdg-~~LaSgs~Dg~I~IWDl~tgk~v~~~~---h~~~I~slafsPd-G~~Lasgs~DG~V~IWDl~ 152 (648)
.+|...|++++|++++ .+|++++.|++|++||++++++...+. +...+.+++|+|+ +++|++|+.||.|+|||++
T Consensus 166 ~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 166 RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 9999999999999976 578999999999999999998877663 5667999999984 6789999999999999999
Q ss_pred CCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 153 GKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 153 s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
+. +++..+. +|...|++++|+|++. .+|++++.|+.|++||+...
T Consensus 246 ~~-~~~~~~~--~h~~~v~~v~fsp~g~-----------~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 246 ST-SCVLSSA--VHSQCVTGLVFSPHSV-----------PFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp C---CCEEEE--CCSSCEEEEEECSSSS-----------CCEEEEETTSCEEEECTTCC
T ss_pred CC-cEEEEEc--CCCCCEEEEEEccCCC-----------eEEEEEeCCCeEEEEECCCC
Confidence 87 4455555 8999999999999752 23455677999999998643
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=4.6e-27 Score=254.75 Aligned_cols=208 Identities=16% Similarity=0.211 Sum_probs=180.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|++++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+++++ +|++|+.|++|+|||+.+..+ +..+.+|
T Consensus 115 ~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~-h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd~~~~~~-~~~~~~h 191 (410)
T 1vyh_C 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-HTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFEC-IRTMHGH 191 (410)
T ss_dssp EECSSSSEEEEEESSSCEEEEETTTCCCCEEECC-CSSCEEEEEECTTSS-EEEEEETTSCCCEEETTSSCE-EECCCCC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-cCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCce-eEEEcCC
Confidence 4899999999999999999999999999999987 777899999999998 899999999999999988774 6788999
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~ 159 (648)
...|.+++|+|++.+|++++.|++|++||+++++++..+ .|...|.++.|++++.+|++|+.|+.|++||+++.. ...
T Consensus 192 ~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~-~~~ 270 (410)
T 1vyh_C 192 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE-CKA 270 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EEE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-eee
Confidence 999999999999999999999999999999999988776 588999999999999999999999999999999873 334
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEecc--------CCCCeEEEEeeCCCeEEcCCCCCCCCc
Q 006360 160 VLRACSSSEAVSSLCWQRAKPVFIDETT--------CKAETALLGGAVGDSILMPDPLPSVTT 214 (648)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~~~--------~~~~~~lvs~s~D~~IkvWDlr~~~~~ 214 (648)
.+. +|...|.+++|+|++.+...... ...+.++++++.|+.|++||++.....
T Consensus 271 ~~~--~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 271 ELR--EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp EEC--CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred Eec--CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 444 79999999999997654222100 113668899999999999999865443
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=1.3e-26 Score=251.25 Aligned_cols=191 Identities=14% Similarity=0.250 Sum_probs=170.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|++++|++|+.|+.|++||+.++.++..+.+ |...|.+++|++++. +|++|+.|+.|++||+.+... ...+.+|
T Consensus 199 ~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~-~~~~~~h 275 (410)
T 1vyh_C 199 SIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATKEC-KAELREH 275 (410)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCE-EEEECCC
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC-CCccEEEEEECCCCC-EEEEEcCCCeEEEEECCCCce-eeEecCC
Confidence 4899999999999999999999999999999986 677899999999998 899999999999999988875 5678899
Q ss_pred CCCeEEEEEccC--------------------CCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEE
Q 006360 81 SAPTAGISFSSD--------------------DKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTA 139 (648)
Q Consensus 81 ~~~V~slafsPd--------------------g~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Las 139 (648)
...|.+++|+|+ +.+|++|+.|+.|++||+++++++..+ +|...|.+++|+|+|.+|++
T Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s 355 (410)
T 1vyh_C 276 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355 (410)
T ss_dssp SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEE
T ss_pred CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEE
Confidence 999999999996 679999999999999999999988766 58999999999999999999
Q ss_pred EEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 140 GTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 140 gs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
|+.||.|+|||+++. .++..+. +|...|++++|+|++++|++ ++.|+.|++||++
T Consensus 356 ~s~D~~i~vwd~~~~-~~~~~~~--~h~~~v~~l~~~~~~~~l~s------------gs~D~~i~vW~~r 410 (410)
T 1vyh_C 356 CADDKTLRVWDYKNK-RCMKTLN--AHEHFVTSLDFHKTAPYVVT------------GSVDQTVKVWECR 410 (410)
T ss_dssp EETTTEEEEECCTTS-CCCEEEE--CCSSCEEEEEECSSSSCEEE------------EETTSEEEEEC--
T ss_pred EeCCCeEEEEECCCC-ceEEEEc--CCCCcEEEEEEcCCCCEEEE------------EeCCCcEEEEeCC
Confidence 999999999999877 4455665 79999999999997666544 4679999999975
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=1.3e-26 Score=244.08 Aligned_cols=187 Identities=15% Similarity=0.184 Sum_probs=164.6
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~ 81 (648)
|++++ .|++++.|+.|++||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.|+.|++||+.++.. +..+.+|.
T Consensus 151 ~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~-~~~~~~h~ 226 (340)
T 1got_B 151 FLDDN-QIVTSSGDTTCALWDIETGQQTTTFTG-HTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMC-RQTFTGHE 226 (340)
T ss_dssp EEETT-EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSE-EEEECCCS
T ss_pred ECCCC-cEEEEECCCcEEEEECCCCcEEEEEcC-CCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCee-EEEEcCCc
Confidence 45555 588999999999999999999998886 677899999999998 899999999999999988874 67789999
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCC---CCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCce
Q 006360 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYE---APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (648)
Q Consensus 82 ~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~---~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~ 158 (648)
..|++++|+|++++|++++.|++|++||++.++.+..+.+. ..|.+++|+|+|.+|++|+.||.|+|||+.+.. ..
T Consensus 227 ~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~-~~ 305 (340)
T 1got_B 227 SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD-RA 305 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-EE
T ss_pred CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc-Ee
Confidence 99999999999999999999999999999998887776544 479999999999999999999999999998873 44
Q ss_pred EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCC
Q 006360 159 TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (648)
Q Consensus 159 ~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWD 207 (648)
..+. +|.+.|.+++|+|+|.+|+++ +.|+.|++||
T Consensus 306 ~~~~--~h~~~v~~~~~s~dg~~l~s~------------s~D~~i~iWd 340 (340)
T 1got_B 306 GVLA--GHDNRVSCLGVTDDGMAVATG------------SWDSFLKIWN 340 (340)
T ss_dssp EEEE--CCSSCEEEEEECTTSSCEEEE------------ETTSCEEEEC
T ss_pred eEee--cCCCcEEEEEEcCCCCEEEEE------------cCCccEEecC
Confidence 4555 899999999999977666554 6699999997
No 10
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=4.6e-26 Score=242.06 Aligned_cols=189 Identities=17% Similarity=0.212 Sum_probs=166.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspd--g~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~ 78 (648)
+|++++.+|++++.|++|++||+.+++++..+.+ |...|.+++|+++ +. +|++|+.|+.|++||++++.+ +..+.
T Consensus 161 ~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~g~-~l~sgs~Dg~v~~wd~~~~~~-~~~~~ 237 (354)
T 2pbi_B 161 SFTNSDMQILTASGDGTCALWDVESGQLLQSFHG-HGADVLCLDLAPSETGN-TFVSGGCDKKAMVWDMRSGQC-VQAFE 237 (354)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECCCSSCC-EEEEEETTSCEEEEETTTCCE-EEEEC
T ss_pred EEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC-CCCCeEEEEEEeCCCCC-EEEEEeCCCeEEEEECCCCcE-EEEec
Confidence 4789999999999999999999999999999987 6678889999885 44 899999999999999998875 67789
Q ss_pred cCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeC---CCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCC
Q 006360 79 QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKP 155 (648)
Q Consensus 79 ~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h---~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~ 155 (648)
.|...|++++|+|++.+|++++.|++|++||++.++.+..+.+ ...+.+++|+|+|.+|++|+.|+.|+|||+.+..
T Consensus 238 ~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 238 THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc
Confidence 9999999999999999999999999999999999887766643 3478999999999999999999999999998773
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCC
Q 006360 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (648)
Q Consensus 156 ~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWD 207 (648)
.+..+. +|.+.|++++|+|+|++|+++ +.|+.|++|+
T Consensus 318 -~~~~l~--~h~~~v~~l~~spdg~~l~sg------------s~D~~v~vW~ 354 (354)
T 2pbi_B 318 -RVSILF--GHENRVSTLRVSPDGTAFCSG------------SWDHTLRVWA 354 (354)
T ss_dssp -EEEEEC--CCSSCEEEEEECTTSSCEEEE------------ETTSEEEEEC
T ss_pred -eEEEEE--CCCCcEEEEEECCCCCEEEEE------------cCCCCEEecC
Confidence 344444 899999999999977666555 6699999996
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=1.7e-26 Score=244.03 Aligned_cols=195 Identities=13% Similarity=0.192 Sum_probs=164.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeE--EEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC-ceeEEe
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAA--ELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS-PKVSWL 77 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~--~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~-~~v~~l 77 (648)
+|+|+|++||+|+.|+.|+|||+..+.... .+...|...|.+++|+|+++ +|++|+.|++|+|||+.... ..+..+
T Consensus 23 ~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~s~D~~v~iw~~~~~~~~~~~~~ 101 (345)
T 3fm0_A 23 AWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN-YLASASFDATTCIWKKNQDDFECVTTL 101 (345)
T ss_dssp EECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECCC-EEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC-EEEEEECCCcEEEEEccCCCeEEEEEc
Confidence 589999999999999999999998776443 33345788999999999998 89999999999999997764 235678
Q ss_pred ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCce---eeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCC
Q 006360 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP---SSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (648)
Q Consensus 78 ~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~---v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s 153 (648)
.+|...|.+++|+|++++|++++.|+.|++||++.+.. +..+ .|...|.+++|+|++.+|++++.|+.|++||++.
T Consensus 102 ~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~ 181 (345)
T 3fm0_A 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEE 181 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEET
T ss_pred cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecC
Confidence 89999999999999999999999999999999987643 3333 5889999999999999999999999999999987
Q ss_pred CCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 154 KPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 154 ~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
.. ........+|...|++++|+|+|++|++ ++.|+.|++||..
T Consensus 182 ~~-~~~~~~~~~h~~~v~~l~~sp~g~~l~s------------~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 182 DD-WVCCATLEGHESTVWSLAFDPSGQRLAS------------CSDDRTVRIWRQY 224 (345)
T ss_dssp TE-EEEEEEECCCSSCEEEEEECTTSSEEEE------------EETTSCEEEEEEE
T ss_pred CC-EEEEEEecCCCCceEEEEECCCCCEEEE------------EeCCCeEEEeccc
Confidence 52 2223334489999999999997666544 4679999999864
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=6.3e-26 Score=234.26 Aligned_cols=196 Identities=19% Similarity=0.263 Sum_probs=171.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|++++|++++.||.|++||+.+++....+.+ |...|.+++|+|+++ +|++++.|+.|++||+.+.+. +..+.+|
T Consensus 30 ~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~~~d~~i~vwd~~~~~~-~~~~~~~ 106 (312)
T 4ery_A 30 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKC-LKTLKGH 106 (312)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCE-EEEEECC
T ss_pred EECCCCCEEEEeeCCCeEEEEeCCCcccchhhcc-CCCceEEEEEcCCCC-EEEEECCCCEEEEEECCCCcE-EEEEcCC
Confidence 4899999999999999999999999999888876 677899999999998 899999999999999998874 6778899
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~ 159 (648)
...|.+++|+|++++|++++.|+.|++||+++++++..+ .|...|.+++|+|++.+|++++.||.|++||+++... +.
T Consensus 107 ~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~ 185 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LK 185 (312)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-EE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce-ee
Confidence 999999999999999999999999999999999888776 4888999999999999999999999999999998743 23
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
.+. ..+...+..++|+|+++++++ ++.|+.|++||++....
T Consensus 186 ~~~-~~~~~~~~~~~~~~~~~~l~~------------~~~d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 186 TLI-DDDNPPVSFVKFSPNGKYILA------------ATLDNTLKLWDYSKGKC 226 (312)
T ss_dssp EEC-CSSCCCEEEEEECTTSSEEEE------------EETTTEEEEEETTTTEE
T ss_pred EEe-ccCCCceEEEEECCCCCEEEE------------EcCCCeEEEEECCCCcE
Confidence 222 256778999999997665544 46699999999976543
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=1.7e-26 Score=245.82 Aligned_cols=194 Identities=12% Similarity=0.157 Sum_probs=166.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee-EEecc
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV-SWLKQ 79 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v-~~l~~ 79 (648)
+|+|+|++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+++++.+|++++.|+.|+|||+++++... ..+..
T Consensus 146 ~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~ 224 (357)
T 4g56_B 146 SVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA-HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCA 224 (357)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTT
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecc
Confidence 5899999999999999999999999999999986 778899999999987789999999999999998776432 23346
Q ss_pred CCCCeEEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCC-CEEEEEEcCCeEEEEECCCCCC
Q 006360 80 HSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDD-WILTAGTSNGRVVFYDIRGKPQ 156 (648)
Q Consensus 80 H~~~V~slafsPd-g~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG-~~Lasgs~DG~V~IWDl~s~~~ 156 (648)
|...|.+++|+|+ +.+|++|+.|+.|++||+++++++..+ .|...|.+++|+|++ ++|++|+.||+|+|||+++.
T Consensus 225 ~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-- 302 (357)
T 4g56_B 225 SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-- 302 (357)
T ss_dssp CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC--
T ss_pred ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC--
Confidence 7788999999995 678999999999999999999888776 588999999999987 67999999999999999887
Q ss_pred ceEEEeecCCCCCeeEEEEcc-CCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 157 PLTVLRACSSSEAVSSLCWQR-AKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 157 ~~~~l~~~~h~~~VtsLafsp-dg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
+.+...+|.+.|++|+|+| ++. +|++++.|+.|++||+...
T Consensus 303 --~~~~~~~H~~~V~~vafsP~d~~------------~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 303 --EVFRDLSHRDFVTGVAWSPLDHS------------KFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp --EEEEECCCSSCEEEEEECSSSTT------------EEEEEETTSCEEEEECC--
T ss_pred --cEeEECCCCCCEEEEEEeCCCCC------------EEEEEcCCCeEEEEECCCC
Confidence 3344458999999999998 444 4555577999999998643
No 14
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.95 E-value=3.2e-26 Score=240.23 Aligned_cols=196 Identities=18% Similarity=0.235 Sum_probs=172.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|++++.++++++.|+.|++||+.+++.+..+.. +...+.+++|+|+++ +|++++.|+.|++||+..+.. ...+..|
T Consensus 87 ~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~-~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~~~-~~~~~~~ 163 (321)
T 3ow8_A 87 DISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA-GPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESGKK-EYSLDTR 163 (321)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTCSE-EEEEECS
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeC-CCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCCce-eEEecCC
Confidence 3788999999999999999999999999998886 555677899999998 899999999999999988875 5667889
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~ 159 (648)
...|.+++|+|++++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++.+|++|+.||.|+|||++... ...
T Consensus 164 ~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~-~~~ 242 (321)
T 3ow8_A 164 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN-LAG 242 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC-EEE
T ss_pred CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc-eeE
Confidence 999999999999999999999999999999999988777 588999999999999999999999999999999873 344
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCc
Q 006360 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (648)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ 214 (648)
.+. +|...|.+++|+|++++| ++++.|+.|++||+......
T Consensus 243 ~~~--~h~~~v~~~~~sp~~~~l------------~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 243 TLS--GHASWVLNVAFCPDDTHF------------VSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp EEC--CCSSCEEEEEECTTSSEE------------EEEETTSCEEEEETTTTEEE
T ss_pred EEc--CCCCceEEEEECCCCCEE------------EEEeCCCcEEEEeCCCCEEE
Confidence 444 899999999999976555 44567999999999765443
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=9.3e-26 Score=237.61 Aligned_cols=195 Identities=14% Similarity=0.216 Sum_probs=169.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC---ceeEEe
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---PKVSWL 77 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~---~~v~~l 77 (648)
+|+||+++|++|+.||.|+|||+.+++.+..+.. |...|.+++|+|+++ +|++|+.|+.|++||+.+.. .....+
T Consensus 62 ~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~s~~~d~~v~iw~~~~~~~~~~~~~~~ 139 (340)
T 1got_B 62 HWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCAYAPSGN-YVACGGLDNICSIYNLKTREGNVRVSREL 139 (340)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-SSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTCSBSCEEEEEE
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCCcceEeec-CCccEEEEEECCCCC-EEEEEeCCCeEEEEECccCCCcceeEEEe
Confidence 4899999999999999999999999999988886 677889999999998 89999999999999997653 234567
Q ss_pred ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCC
Q 006360 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (648)
Q Consensus 78 ~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~ 156 (648)
.+|...|.++.|++++. |++++.|+.|++||+.+++++..+ .|...|.+++|+|++.+|++|+.||.|++||+++. .
T Consensus 140 ~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~-~ 217 (340)
T 1got_B 140 AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG-M 217 (340)
T ss_dssp ECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-S
T ss_pred cCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-e
Confidence 89999999999998764 889999999999999999988776 58999999999999999999999999999999987 3
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 157 ~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
+...+. +|...|.+++|+|+++++ ++++.|+.|++||++....
T Consensus 218 ~~~~~~--~h~~~v~~v~~~p~~~~l------------~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 218 CRQTFT--GHESDINAICFFPNGNAF------------ATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp EEEEEC--CCSSCEEEEEECTTSSEE------------EEEETTSCEEEEETTTTEE
T ss_pred eEEEEc--CCcCCEEEEEEcCCCCEE------------EEEcCCCcEEEEECCCCcE
Confidence 344444 799999999999976555 4456799999999986543
No 16
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.95 E-value=8.1e-26 Score=243.07 Aligned_cols=197 Identities=16% Similarity=0.206 Sum_probs=162.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|||++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++++.|++|++||+.++.. ... ..+
T Consensus 130 ~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~~~~~~-~~~-~~~ 205 (393)
T 1erj_A 130 CFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDLRTGQC-SLT-LSI 205 (393)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-EEE-EEC
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCC-EEEEecCCCcEEEEECCCCee-EEE-EEc
Confidence 4899999999999999999999999998888886 677899999999998 899999999999999988774 233 346
Q ss_pred CCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeEe--------eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEEC
Q 006360 81 SAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI--------TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDI 151 (648)
Q Consensus 81 ~~~V~slafsP-dg~~LaSgs~Dg~I~IWDl~tgk~v~~~--------~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl 151 (648)
...|.+++|+| ++++|++++.|+.|++||+++++.+..+ .|...|.+++|+|+|.+|++|+.||.|+|||+
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~ 285 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL 285 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 67899999999 9999999999999999999998877654 47889999999999999999999999999999
Q ss_pred CCCCCc---------eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 152 RGKPQP---------LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 152 ~s~~~~---------~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
+..... .......+|...|.+++|++++.+|++ ++.|+.|++||+.....
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s------------gs~D~~v~iwd~~~~~~ 344 (393)
T 1erj_A 286 QNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILS------------GSKDRGVLFWDKKSGNP 344 (393)
T ss_dssp ---------------CEEEEEECCSSCEEEEEECGGGCEEEE------------EETTSEEEEEETTTCCE
T ss_pred CCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEE------------EeCCCeEEEEECCCCeE
Confidence 864211 112233489999999999997666554 45688888888765443
No 17
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=8.9e-26 Score=233.26 Aligned_cols=199 Identities=11% Similarity=0.168 Sum_probs=164.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCC--CceeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ceeE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLAS--GAKAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKVS 75 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~s--g~~i~~l~~~~~~~V~~Vafspd--g~~lLaSgs~Dg~V~IWDl~t~~-~~v~ 75 (648)
+|+|+|++||+|+.|+.|+|||+.. .+.+..+.+ |...|.+++|+++ ++ +|++|+.|++|+|||+.++. ..+.
T Consensus 16 ~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~g-H~~~V~~v~~s~~~~g~-~l~s~s~D~~v~iWd~~~~~~~~~~ 93 (297)
T 2pm7_B 16 VMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGT-ILASCSYDGKVMIWKEENGRWSQIA 93 (297)
T ss_dssp EECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECC-CSSCEEEEEECCGGGCS-EEEEEETTTEEEEEEBSSSCBCCCE
T ss_pred EECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcc-ccCCeEEEEecCCCcCC-EEEEEcCCCEEEEEEcCCCceEEEE
Confidence 5899999999999999999999964 356778876 7788999999864 55 89999999999999998764 2356
Q ss_pred EeccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEeCCCCce---eeEeeCCCCeEEEEEeCC-------------CCEE
Q 006360 76 WLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRP---SSCITYEAPFSSLAFIDD-------------DWIL 137 (648)
Q Consensus 76 ~l~~H~~~V~slafsPd--g~~LaSgs~Dg~I~IWDl~tgk~---v~~~~h~~~I~slafsPd-------------G~~L 137 (648)
.+..|...|.+++|+|+ +.+|++++.|+.|++||++.+.. .....|...|.+++|+|+ +++|
T Consensus 94 ~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l 173 (297)
T 2pm7_B 94 VHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (297)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEE
T ss_pred EeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceE
Confidence 67889999999999996 89999999999999999987642 233468999999999997 5799
Q ss_pred EEEEcCCeEEEEECCCCCCceEE-EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 138 TAGTSNGRVVFYDIRGKPQPLTV-LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 138 asgs~DG~V~IWDl~s~~~~~~~-l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
++|+.|+.|+|||++........ ....+|...|.+++|+|++ ..+.++++++.|+.|++||+..
T Consensus 174 ~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~---------~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV---------LLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC---------SSSEEEEEEETTSCEEEEEESS
T ss_pred EEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC---------CCceEEEEEECCCcEEEEEeCC
Confidence 99999999999999876432222 2234899999999999963 1245677778899999999865
No 18
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=4.4e-26 Score=243.59 Aligned_cols=191 Identities=11% Similarity=0.084 Sum_probs=154.5
Q ss_pred CccCCCCEEEEEE--CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-eEEe
Q 006360 1 MYNCKDEHLASIS--LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK-VSWL 77 (648)
Q Consensus 1 AFSpdG~~Lasgs--~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~-v~~l 77 (648)
+|+|||++|++++ .|+.|+|||+.+++++..+. |...|.+|+|+|+++ +|++++.|+ +++|+..++... ....
T Consensus 140 ~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~-~l~s~s~~~-~~~~~~~~~~~~~~~~~ 215 (365)
T 4h5i_A 140 YISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGK-VVAYITGSS-LEVISTVTGSCIARKTD 215 (365)
T ss_dssp EECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSS-EEEEECSSC-EEEEETTTCCEEEEECC
T ss_pred EEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCc-eEEecccee-EEEEEeccCcceeeeec
Confidence 5899999887554 68999999999999998886 456689999999998 788887655 566666555433 3345
Q ss_pred ccCCCCeEEEEEccCCCEEEEEeCCC----eEEEEeCCCCcee-----eEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEE
Q 006360 78 KQHSAPTAGISFSSDDKIIASVGLDK----KLYTYDPGSRRPS-----SCITYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (648)
Q Consensus 78 ~~H~~~V~slafsPdg~~LaSgs~Dg----~I~IWDl~tgk~v-----~~~~h~~~I~slafsPdG~~Lasgs~DG~V~I 148 (648)
..|...|.+++|+|++.++++++.|+ .+++||+...... ....|...|++++|+|||++||+|+.|+.|+|
T Consensus 216 ~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~i 295 (365)
T 4h5i_A 216 FDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIAL 295 (365)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEE
Confidence 67888999999999999999999887 6889998776532 22358889999999999999999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 149 WDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
||+++.+ ++..+ ..+|...|++|+|+|||++|++ ++.|++|+|||+.
T Consensus 296 wd~~~~~-~~~~~-~~gH~~~V~~v~fSpdg~~laS------------~S~D~tvrvw~ip 342 (365)
T 4h5i_A 296 VKLKDLS-MSKIF-KQAHSFAITEVTISPDSTYVAS------------VSAANTIHIIKLP 342 (365)
T ss_dssp EETTTTE-EEEEE-TTSSSSCEEEEEECTTSCEEEE------------EETTSEEEEEECC
T ss_pred EECCCCc-EEEEe-cCcccCCEEEEEECCCCCEEEE------------EeCCCeEEEEEcC
Confidence 9999873 23222 1379999999999997766655 4779999999984
No 19
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.94 E-value=5.2e-25 Score=231.92 Aligned_cols=191 Identities=15% Similarity=0.241 Sum_probs=158.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe---
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL--- 77 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l--- 77 (648)
+|+|++.+|++++.|+.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++++.|+.|++||+.... ....
T Consensus 83 ~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~~~--~~~~~~~ 158 (343)
T 2xzm_R 83 ALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVG-HQSEVYSVAFSPDNR-QILSAGAEREIKLWNILGEC--KFSSAEK 158 (343)
T ss_dssp EECSSTTEEEEEETTSEEEEEETTSSCEEEEEEC-CCSCEEEEEECSSTT-EEEEEETTSCEEEEESSSCE--EEECCTT
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcC-CCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccCCc--eeeeecc
Confidence 4889999999999999999999999999999986 778899999999998 89999999999999998543 2222
Q ss_pred ccCCCCeEEEEEccCC----------CEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeE
Q 006360 78 KQHSAPTAGISFSSDD----------KIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRV 146 (648)
Q Consensus 78 ~~H~~~V~slafsPdg----------~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V 146 (648)
..|...|.+++|+|++ .+|++++.|+.|++||.. .+....+ .|...|.+++|+|+|++|++|+.||.|
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v 237 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKL 237 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred cCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCCEEEEEcCCCeE
Confidence 2788999999999976 799999999999999954 4444443 689999999999999999999999999
Q ss_pred EEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCC
Q 006360 147 VFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 147 ~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
+|||+.....+...+. +...|.+++|+|++.+++++ .|+.|++||+....
T Consensus 238 ~iwd~~~~~~~~~~~~---~~~~v~~v~~sp~~~~la~~-------------~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 238 LIWDILNLTYPQREFD---AGSTINQIAFNPKLQWVAVG-------------TDQGVKIFNLMTQS 287 (343)
T ss_dssp EEEESSCCSSCSEEEE---CSSCEEEEEECSSSCEEEEE-------------ESSCEEEEESSSCC
T ss_pred EEEECCCCcccceeec---CCCcEEEEEECCCCCEEEEE-------------CCCCEEEEEeCCCC
Confidence 9999965544444443 45679999999976655433 37778888876433
No 20
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=2.5e-25 Score=232.48 Aligned_cols=197 Identities=12% Similarity=0.154 Sum_probs=166.0
Q ss_pred CccCCC-CEEEEEECCCcEEEEECCC-----CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 006360 1 MYNCKD-EHLASISLSGDLILHNLAS-----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (648)
Q Consensus 1 AFSpdG-~~Lasgs~DG~V~IwDl~s-----g~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v 74 (648)
+|+|++ ++|++|+.|++|++||+.. +..+..+.+ |...|.+++|+++++ +|++|+.|++|+|||+.+++. +
T Consensus 24 ~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~dg~-~l~s~s~D~~v~~wd~~~~~~-~ 100 (319)
T 3frx_A 24 ATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG-HSHIVQDCTLTADGA-YALSASWDKTLRLWDVATGET-Y 100 (319)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-E
T ss_pred EccCCCccEEEEecCCccEEEecCCCCCccccccceEEeC-CcccEEEEEECCCCC-EEEEEeCCCEEEEEECCCCCe-e
Confidence 478865 8999999999999999853 234566776 778899999999998 899999999999999998874 6
Q ss_pred EEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCC------CCEEEEEEcCCeEEE
Q 006360 75 SWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDD------DWILTAGTSNGRVVF 148 (648)
Q Consensus 75 ~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPd------G~~Lasgs~DG~V~I 148 (648)
..+.+|...|.+++|+|++.+|++++.|++|++||++.........|...|.++.|.|. +.+|++++.|+.|++
T Consensus 101 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~ 180 (319)
T 3frx_A 101 QRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKA 180 (319)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEE
T ss_pred EEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEE
Confidence 77899999999999999999999999999999999986555555579999999999984 558999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcc
Q 006360 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (648)
Q Consensus 149 WDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~s 215 (648)
||++... ....+ .+|...|.+++|+|+|++|++ ++.|+.|++||+.......
T Consensus 181 wd~~~~~-~~~~~--~~h~~~v~~~~~sp~g~~l~s------------~~~dg~i~iwd~~~~~~~~ 232 (319)
T 3frx_A 181 WNLNQFQ-IEADF--IGHNSNINTLTASPDGTLIAS------------AGKDGEIMLWNLAAKKAMY 232 (319)
T ss_dssp EETTTTE-EEEEE--CCCCSCEEEEEECTTSSEEEE------------EETTCEEEEEETTTTEEEE
T ss_pred EECCcch-hheee--cCCCCcEEEEEEcCCCCEEEE------------EeCCCeEEEEECCCCcEEE
Confidence 9998763 23333 489999999999997666554 4669999999998655443
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.94 E-value=5.3e-25 Score=233.84 Aligned_cols=197 Identities=19% Similarity=0.256 Sum_probs=163.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeC----------------------------------------------
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD---------------------------------------------- 34 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~---------------------------------------------- 34 (648)
+|+|++++|++|+.||.|+|||..+++....+..
T Consensus 71 ~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~ 150 (354)
T 2pbi_B 71 DWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSV 150 (354)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEE
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceee
Confidence 4788899999999999999999776655433321
Q ss_pred -CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcc--CCCEEEEEeCCCeEEEEeCC
Q 006360 35 -PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS--DDKIIASVGLDKKLYTYDPG 111 (648)
Q Consensus 35 -~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafsP--dg~~LaSgs~Dg~I~IWDl~ 111 (648)
.|...|.+++|++++. .|++++.|++|++||+.+++. +..+.+|...|.+++|+| ++++|++|+.|+.|++||++
T Consensus 151 ~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~ 228 (354)
T 2pbi_B 151 AMHTNYLSACSFTNSDM-QILTASGDGTCALWDVESGQL-LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR 228 (354)
T ss_dssp EECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETT
T ss_pred eccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCeE-EEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 1556688899999887 799999999999999998874 678899999999999988 57899999999999999999
Q ss_pred CCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCC
Q 006360 112 SRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKA 190 (648)
Q Consensus 112 tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~ 190 (648)
+++++..+ .|...|.+++|+|++.+|++|+.|+.|+|||++.. ..+..+....+...+.+++|+|+++++++
T Consensus 229 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~l~~------ 301 (354)
T 2pbi_B 229 SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD-REVAIYSKESIIFGASSVDFSLSGRLLFA------ 301 (354)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCTTCCSCEEEEEECTTSSEEEE------
T ss_pred CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC-cEEEEEcCCCcccceeEEEEeCCCCEEEE------
Confidence 99988777 58999999999999999999999999999999986 33344443345567899999997666554
Q ss_pred CeEEEEeeCCCeEEcCCCCCCC
Q 006360 191 ETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 191 ~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
++.|+.|++||+....
T Consensus 302 ------g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 302 ------GYNDYTINVWDVLKGS 317 (354)
T ss_dssp ------EETTSCEEEEETTTCS
T ss_pred ------EECCCcEEEEECCCCc
Confidence 4669999999986544
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=3.3e-25 Score=238.34 Aligned_cols=196 Identities=18% Similarity=0.269 Sum_probs=166.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCC-----------------CCcEEEEEEccCCCeEEEEEeCCCeEE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPN-----------------EQVLRVLDYSRNSRHLLVTAGDDGTLH 63 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~-----------------~~~V~~Vafspdg~~lLaSgs~Dg~V~ 63 (648)
+|+|||++|++|+ ++.++||++.+++.+..+..+. ...|++++|+|+++ +|++|+.|+.|+
T Consensus 71 ~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~s~~~d~~i~ 148 (393)
T 1erj_A 71 KFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK-FLATGAEDRLIR 148 (393)
T ss_dssp EECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS-EEEEEETTSCEE
T ss_pred EECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC-EEEEEcCCCeEE
Confidence 4899999999876 6899999999999888776532 12489999999998 899999999999
Q ss_pred EEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeC-CCCEEEEEEc
Q 006360 64 LWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFID-DDWILTAGTS 142 (648)
Q Consensus 64 IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsP-dG~~Lasgs~ 142 (648)
|||+.+++. +..+.+|...|++++|+|++.+|++++.|++|++||++++++...+.+...+.+++|+| ++.+|++|+.
T Consensus 149 iwd~~~~~~-~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 149 IWDIENRKI-VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp EEETTTTEE-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEET
T ss_pred EEECCCCcE-EEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcC
Confidence 999988764 67789999999999999999999999999999999999999988888889999999999 8999999999
Q ss_pred CCeEEEEECCCCCCceEEEe-----ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCC
Q 006360 143 NGRVVFYDIRGKPQPLTVLR-----ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 143 DG~V~IWDl~s~~~~~~~l~-----~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
||.|+|||+++.. .+..+. ..+|...|.+++|+|+|++| ++++.|+.|++||++...
T Consensus 228 d~~v~iwd~~~~~-~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l------------~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 228 DRAVRVWDSETGF-LVERLDSENESGTGHKDSVYSVVFTRDGQSV------------VSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp TSCEEEEETTTCC-EEEEEC------CCCSSCEEEEEECTTSSEE------------EEEETTSEEEEEEC----
T ss_pred CCcEEEEECCCCc-EEEeecccccCCCCCCCCEEEEEECCCCCEE------------EEEeCCCEEEEEECCCCC
Confidence 9999999999873 333331 13789999999999976555 445679999999997543
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.94 E-value=3.8e-25 Score=233.65 Aligned_cols=194 Identities=16% Similarity=0.217 Sum_probs=155.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc--eeEE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP--KVSW 76 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~--~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~--~v~~ 76 (648)
+|+|+|++|++|+.|+.|+|||+..+. ++..+.+ |...|.+++|+|+++ +|++|+.|++|+|||+..... .+..
T Consensus 68 ~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~ 145 (345)
T 3fm0_A 68 AWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEG-HENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSV 145 (345)
T ss_dssp EECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred EECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccC-CCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEE
Confidence 589999999999999999999987764 4566765 778899999999998 899999999999999976542 2566
Q ss_pred eccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee--eEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCC
Q 006360 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS--SCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (648)
Q Consensus 77 l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v--~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s 153 (648)
+..|...|.+++|+|++.+|++++.|+.|++||++.++.. ..+ +|...|.+++|+|+|++|++++.|+.|+|||...
T Consensus 146 ~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 146 LNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp ECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred ecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecccc
Confidence 7899999999999999999999999999999999887533 333 6899999999999999999999999999999743
Q ss_pred CCCc--------------eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 154 KPQP--------------LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 154 ~~~~--------------~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
.... +..+. ..|...|.+++|++++.+++++ +.|+.|++|+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~------------~~d~~i~vw~~~ 282 (345)
T 3fm0_A 226 PGNEQGVACSGSDPSWKCICTLS-GFHSRTIYDIAWCQLTGALATA------------CGDDAIRVFQED 282 (345)
T ss_dssp TTCTTCCCCC---CEEEEEEEEC-SSCSSCEEEEEECTTTCCEEEE------------ETTSCEEEEEEC
T ss_pred CCCCccceeeccCCccceeEEec-CCCCCcEEEEEEecCCCEEEEE------------eCCCeEEEEEeC
Confidence 2110 11111 1378889999999876665544 345556666544
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=2.2e-25 Score=238.54 Aligned_cols=196 Identities=16% Similarity=0.159 Sum_probs=163.5
Q ss_pred ccCC-CCEEEEEECCCcEEEEECCCCceeEEEe----CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 006360 2 YNCK-DEHLASISLSGDLILHNLASGAKAAELK----DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (648)
Q Consensus 2 FSpd-G~~Lasgs~DG~V~IwDl~sg~~i~~l~----~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~ 76 (648)
|+|+ +.+|++|+.|++|++||+.+++.+..+. ..|...|.+++|++.+.++|++|+.|++|+|||++.....+..
T Consensus 165 ~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~ 244 (380)
T 3iz6_a 165 YVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRT 244 (380)
T ss_dssp CCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEE
T ss_pred EecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEE
Confidence 5665 4579999999999999999999887773 2467788999998844449999999999999999754444778
Q ss_pred eccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeC--------CCCeEEEEEeCCCCEEEEEEcCCeEEE
Q 006360 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY--------EAPFSSLAFIDDDWILTAGTSNGRVVF 148 (648)
Q Consensus 77 l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h--------~~~I~slafsPdG~~Lasgs~DG~V~I 148 (648)
+.+|...|++++|+|++++|++++.|++|++||+++++.+..+.. ...|.+++|+|+|.+|++|+.||.|+|
T Consensus 245 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~v 324 (380)
T 3iz6_a 245 YHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYV 324 (380)
T ss_dssp ECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEE
T ss_pred ECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEE
Confidence 899999999999999999999999999999999999988776632 224899999999999999999999999
Q ss_pred EECCCCCCceEEEee--cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 149 YDIRGKPQPLTVLRA--CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 149 WDl~s~~~~~~~l~~--~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
||+..... ...+.. .+|.+.|.+++|+|+|++|+++ +.|+.|++|++..
T Consensus 325 wd~~~~~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg------------s~D~~i~iW~~~~ 375 (380)
T 3iz6_a 325 WDTLLAEM-VLNLGTLQNSHEGRISCLGLSSDGSALCTG------------SWDKNLKIWAFSG 375 (380)
T ss_dssp EETTTCCE-EEEECCSCSSCCCCCCEEEECSSSSEEEEE------------CTTSCEEEEECCS
T ss_pred EECCCCce-EEEEecccCCCCCceEEEEECCCCCEEEEe------------eCCCCEEEEecCC
Confidence 99987743 333311 3799999999999976665554 6699999999864
No 25
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=2.9e-25 Score=227.56 Aligned_cols=198 Identities=16% Similarity=0.284 Sum_probs=161.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc----eeEEEeCCCCCcEEEEEEcc--CCCeEEEEEeCCCeEEEEECCCCC---
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGA----KAAELKDPNEQVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGRS--- 71 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~----~i~~l~~~~~~~V~~Vafsp--dg~~lLaSgs~Dg~V~IWDl~t~~--- 71 (648)
+|+|++++|++++.||.|+|||+.++. .+..+.+ |...|.+++|++ +++ +|++++.|+.|+|||+....
T Consensus 18 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~d~~-~l~s~~~dg~v~vwd~~~~~~~~ 95 (351)
T 3f3f_A 18 VYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRA-HDSSIVAIDWASPEYGR-IIASASYDKTVKLWEEDPDQEEC 95 (351)
T ss_dssp EECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEEC-CSSCEEEEEECCGGGCS-EEEEEETTSCEEEEEECTTSCTT
T ss_pred EEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceecc-CCCcEEEEEEcCCCCCC-EEEEEcCCCeEEEEecCCCcccc
Confidence 489999999999999999999998763 5556665 778899999999 466 89999999999999997753
Q ss_pred -----ceeEEeccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEeCCCCce-----------------------------
Q 006360 72 -----PKVSWLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRP----------------------------- 115 (648)
Q Consensus 72 -----~~v~~l~~H~~~V~slafsPd--g~~LaSgs~Dg~I~IWDl~tgk~----------------------------- 115 (648)
..+..+..|...|.+++|+|+ +.+|++++.|+.|++||+++++.
T Consensus 96 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 96 SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 236677899999999999998 99999999999999999876542
Q ss_pred -------------------------------eeEe-eCCCCeEEEEEeCCC----CEEEEEEcCCeEEEEECCCCCCc--
Q 006360 116 -------------------------------SSCI-TYEAPFSSLAFIDDD----WILTAGTSNGRVVFYDIRGKPQP-- 157 (648)
Q Consensus 116 -------------------------------v~~~-~h~~~I~slafsPdG----~~Lasgs~DG~V~IWDl~s~~~~-- 157 (648)
+..+ .|...|.+++|+|++ ++|++++.||.|++||++.....
T Consensus 176 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 255 (351)
T 3f3f_A 176 CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLA 255 (351)
T ss_dssp CCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----
T ss_pred ccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccc
Confidence 1111 377899999999998 89999999999999999864210
Q ss_pred -----------------------------------------eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEE
Q 006360 158 -----------------------------------------LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLG 196 (648)
Q Consensus 158 -----------------------------------------~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs 196 (648)
.......+|...|++++|+|++++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~----------- 324 (351)
T 3f3f_A 256 SEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSA----------- 324 (351)
T ss_dssp -----------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEE-----------
T ss_pred cCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEe-----------
Confidence 1222233799999999999976665554
Q ss_pred eeCCCeEEcCCCCCCC
Q 006360 197 GAVGDSILMPDPLPSV 212 (648)
Q Consensus 197 ~s~D~~IkvWDlr~~~ 212 (648)
+.|+.|++||+....
T Consensus 325 -~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 325 -GDDGKVRLWKATYSN 339 (351)
T ss_dssp -ETTSCEEEEEECTTS
T ss_pred -cCCCcEEEEecCcCc
Confidence 669999999997543
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.94 E-value=5.4e-25 Score=231.79 Aligned_cols=189 Identities=16% Similarity=0.184 Sum_probs=158.5
Q ss_pred cC-CCCEEEEEECCCcEEEEECCCC-------ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 006360 3 NC-KDEHLASISLSGDLILHNLASG-------AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (648)
Q Consensus 3 Sp-dG~~Lasgs~DG~V~IwDl~sg-------~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v 74 (648)
++ ++++|++|+.|++|+|||+... .....+.+ |...|.+++|+|++. +|++++.|++|+|||+.++.. +
T Consensus 35 ~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~-h~~~V~~~~~~~~~~-~l~s~s~D~~v~lwd~~~~~~-~ 111 (343)
T 2xzm_R 35 ENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTG-HNHFVSDLALSQENC-FAISSSWDKTLRLWDLRTGTT-Y 111 (343)
T ss_dssp TTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECC-CSSCEEEEEECSSTT-EEEEEETTSEEEEEETTSSCE-E
T ss_pred cCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhcc-CCCceEEEEECCCCC-EEEEEcCCCcEEEEECCCCcE-E
Confidence 45 8999999999999999998653 34455665 778899999999998 899999999999999998874 6
Q ss_pred EEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe---eCCCCeEEEEEeCCC----------CEEEEEE
Q 006360 75 SWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI---TYEAPFSSLAFIDDD----------WILTAGT 141 (648)
Q Consensus 75 ~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~---~h~~~I~slafsPdG----------~~Lasgs 141 (648)
..+.+|...|++++|+|++++|++++.|+.|++||+......... .|...|.+++|+|++ .+|++++
T Consensus 112 ~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~ 191 (343)
T 2xzm_R 112 KRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG 191 (343)
T ss_dssp EEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE
T ss_pred EEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEc
Confidence 778899999999999999999999999999999999854433333 478899999999986 7999999
Q ss_pred cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 142 SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 142 ~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
.||.|++||... .....+. +|...|.+++|+|+|++|++ ++.|+.|++||++.
T Consensus 192 ~d~~i~iwd~~~--~~~~~~~--~h~~~v~~~~~s~~g~~l~s------------gs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 192 WDGRLKVWNTNF--QIRYTFK--AHESNVNHLSISPNGKYIAT------------GGKDKKLLIWDILN 244 (343)
T ss_dssp TTSEEEEEETTT--EEEEEEE--CCSSCEEEEEECTTSSEEEE------------EETTCEEEEEESSC
T ss_pred CCCEEEEEcCCC--ceeEEEc--CccccceEEEECCCCCEEEE------------EcCCCeEEEEECCC
Confidence 999999999543 2333343 89999999999997766555 46699999999853
No 27
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.3e-25 Score=231.08 Aligned_cols=194 Identities=14% Similarity=0.229 Sum_probs=154.0
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCC--ceeEEEe-CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC------Cc
Q 006360 2 YNCKDEHLASISLSGDLILHNLASG--AKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR------SP 72 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg--~~i~~l~-~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~------~~ 72 (648)
|+++ +|++|+.|+.|+|||+..+ ..+..+. ..|...|.+++|+|+++ +|++|+.|++|+|||+... ..
T Consensus 22 ~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~iw~~~~~~~~~~~~~ 98 (330)
T 2hes_X 22 FSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS-LLAAGSFDSTVSIWAKEESADRTFEMD 98 (330)
T ss_dssp EETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS-EEEEEETTSCEEEEEC-------CCCE
T ss_pred cCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC-EEEEEeCCCcEEEEEcccCcCccccce
Confidence 5555 9999999999999999765 3455553 33888999999999998 8999999999999998532 12
Q ss_pred eeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC----ceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEE
Q 006360 73 KVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR----RPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVV 147 (648)
Q Consensus 73 ~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tg----k~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~ 147 (648)
.+..+.+|...|++++|+|++++|++|+.|++|++||++.. +++..+ .|...|.+++|+|++.+|++++.|+.|+
T Consensus 99 ~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~ 178 (330)
T 2hes_X 99 LLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVR 178 (330)
T ss_dssp EEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred eEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 35678899999999999999999999999999999999532 344444 5889999999999999999999999999
Q ss_pred EEECCCCC-CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 148 FYDIRGKP-QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 148 IWDl~s~~-~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
|||+.... .++..+. +|.+.|.+++|+|++ ...++++++.|+.|++||+..
T Consensus 179 iW~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~----------~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 179 IWKDYDDDWECVAVLN--GHEGTVWSSDFDKTE----------GVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEEETTEEEEEEEEC--CCSSCEEEEEECCSS----------SSCEEEEEETTSCEEEEEEEE
T ss_pred EEECCCCCeeEEEEcc--CCCCcEEEEEecCCC----------CeeEEEEEeCCCeEEEEEecC
Confidence 99987642 2334444 899999999999952 234566778899999999864
No 28
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.94 E-value=7.3e-26 Score=239.05 Aligned_cols=181 Identities=12% Similarity=0.134 Sum_probs=145.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc---eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc--eeE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP--KVS 75 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~---~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~--~v~ 75 (648)
+|+|++++|++++.||.|++||+.+++ ....+.. |...|.+++|+|+++ +|++++.|+.|++||+..... ...
T Consensus 62 ~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~ 139 (377)
T 3dwl_C 62 DWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLR-LNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSK 139 (377)
T ss_dssp EECTTTCCEEEEETTSSEEEC------CCCCEEECCC-CSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCE
T ss_pred EEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecc-cCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeee
Confidence 489999999999999999999998876 4555554 778899999999998 799999999999999987652 245
Q ss_pred Eecc-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC------------------CceeeEeeCCCCeEEEEEeCCCCE
Q 006360 76 WLKQ-HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS------------------RRPSSCITYEAPFSSLAFIDDDWI 136 (648)
Q Consensus 76 ~l~~-H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~t------------------gk~v~~~~h~~~I~slafsPdG~~ 136 (648)
.+.. |...|++++|+|++++|++++.|+.|++||+.. ++++..+.|...|.+++|+|++++
T Consensus 140 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 140 HLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNA 219 (377)
T ss_dssp EECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSC
T ss_pred EeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCE
Confidence 6666 999999999999999999999999999999852 344444578899999999999999
Q ss_pred EEEEEcCCeEEEEECCCCCCc---eEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006360 137 LTAGTSNGRVVFYDIRGKPQP---LTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 137 Lasgs~DG~V~IWDl~s~~~~---~~~l~~~~h~~~VtsLafspdg~~Las~ 185 (648)
|++++.||.|+|||+++...+ +..+. .|...|.+++|+|++++|+++
T Consensus 220 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 220 LAYAGHDSSVTIAYPSAPEQPPRALITVK--LSQLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp EEEEETTTEEC-CEECSTTSCEEECCCEE--CSSSCEEEEEEEETTEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCCCcceeeEeec--CCCCceEEEEEcCCCCEEEEE
Confidence 999999999999999987553 23333 789999999999987777665
No 29
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.93 E-value=2.9e-25 Score=237.52 Aligned_cols=196 Identities=14% Similarity=0.152 Sum_probs=165.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|++++++|++++.||.|++||+.+++....+.. |...|.+++|+|+++ +|++++.|+.|++||+.+++. +..+.+|
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~-~~~~~~h 180 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQA-HVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKDGSN-PRTLIGH 180 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTS-SSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCC-CEEEECC
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeeccc-ccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCCCcC-ceEEcCC
Confidence 3789999999999999999999988888776665 778899999999998 899999999999999988775 5678899
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee----CCCCeEE---------------------EEEeCCCC
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT----YEAPFSS---------------------LAFIDDDW 135 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~----h~~~I~s---------------------lafsPdG~ 135 (648)
...|.+++|+|++++|++++.|+.|++||+++++.+..+. +...|.+ ++|+|+++
T Consensus 181 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 260 (420)
T 3vl1_A 181 RATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK 260 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC
Confidence 9999999999999999999999999999999998887763 3444444 45578999
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCC
Q 006360 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 136 ~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
+|++|+.||.|++||+++......... .|...|.+++|+|+++ .++++++.|+.|++||++...
T Consensus 261 ~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~-----------~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 261 YVIAGHVSGVITVHNVFSKEQTIQLPS--KFTCSCNSLTVDGNNA-----------NYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECC--TTSSCEEEEEECSSCT-----------TEEEEEETTSEEEEEETTCTT
T ss_pred EEEEEcCCCeEEEEECCCCceeEEccc--ccCCCceeEEEeCCCC-----------CEEEEEeCCCeEEEEEcCCCc
Confidence 999999999999999998754333322 6889999999999755 144555779999999998653
No 30
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=1e-24 Score=225.34 Aligned_cols=196 Identities=12% Similarity=0.162 Sum_probs=159.3
Q ss_pred CccC--CCCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ce
Q 006360 1 MYNC--KDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PK 73 (648)
Q Consensus 1 AFSp--dG~~Lasgs~DG~V~IwDl~sg~--~i~~l~~~~~~~V~~Vafspd--g~~lLaSgs~Dg~V~IWDl~t~~-~~ 73 (648)
+|++ ++++|++|+.||+|+|||+.+++ .+..+.. |...|.+++|+|+ +. +|++++.|+.|++||++... ..
T Consensus 60 ~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~ 137 (297)
T 2pm7_B 60 DWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTS 137 (297)
T ss_dssp EECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECC-CSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBC
T ss_pred EecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeec-CCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCcee
Confidence 3665 38999999999999999998774 4455554 7788999999997 65 89999999999999997653 22
Q ss_pred eEEeccCCCCeEEEEEccC-------------CCEEEEEeCCCeEEEEeCCCCc----eeeEe-eCCCCeEEEEEeCCC-
Q 006360 74 VSWLKQHSAPTAGISFSSD-------------DKIIASVGLDKKLYTYDPGSRR----PSSCI-TYEAPFSSLAFIDDD- 134 (648)
Q Consensus 74 v~~l~~H~~~V~slafsPd-------------g~~LaSgs~Dg~I~IWDl~tgk----~v~~~-~h~~~I~slafsPdG- 134 (648)
...+.+|...|++++|+|+ +++|++|+.|++|++||+++++ ....+ .|...|.+++|+|++
T Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~ 217 (297)
T 2pm7_B 138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 217 (297)
T ss_dssp CEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCC
Confidence 4567899999999999996 5799999999999999998765 33334 589999999999984
Q ss_pred --CEEEEEEcCCeEEEEECCCCCCce--EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 135 --WILTAGTSNGRVVFYDIRGKPQPL--TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 135 --~~Lasgs~DG~V~IWDl~s~~~~~--~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
.+|++++.|++|+|||++...... ..+....|...|.+++|+|+|++|+++ +.|+.|++|+...
T Consensus 218 ~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~------------~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 218 LRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS------------GGDNKVTLWKENL 285 (297)
T ss_dssp SSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEE------------ETTSCEEEEEECT
T ss_pred CceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEE------------cCCCcEEEEEECC
Confidence 899999999999999998753221 233224688999999999987776555 5699999998753
No 31
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=1.3e-25 Score=237.17 Aligned_cols=199 Identities=12% Similarity=0.165 Sum_probs=158.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCC--ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC--ceeEE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASG--AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS--PKVSW 76 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg--~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~--~~v~~ 76 (648)
+|+|+|++|++++.||.|+|||+.++ +.+..+.+ |...|.+++|+|+++ +|++++.|+.|+|||+.+.. .....
T Consensus 18 ~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~-~l~s~s~d~~v~vwd~~~~~~~~~~~~ 95 (377)
T 3dwl_C 18 AFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSD-HDKIVTCVDWAPKSN-RIVTCSQDRNAYVYEKRPDGTWKQTLV 95 (377)
T ss_dssp EECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCC-CSSCEEEEEECTTTC-CEEEEETTSSEEEC------CCCCEEE
T ss_pred EECCCCCEEEEecCCCEEEEEEccCCceEEEEEEec-CCceEEEEEEeCCCC-EEEEEeCCCeEEEEEcCCCCceeeeeE
Confidence 58999999999999999999999887 66777775 778899999999998 89999999999999998765 22566
Q ss_pred eccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCce---eeEe-e-CCCCeEEEEEeCCCCEEEEEEcCCeEEEEEC
Q 006360 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP---SSCI-T-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDI 151 (648)
Q Consensus 77 l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~---v~~~-~-h~~~I~slafsPdG~~Lasgs~DG~V~IWDl 151 (648)
+..|...|.+++|+|++++|++++.|+.|++||++.++. ...+ . |...|.+++|+|++++|++++.||.|++||+
T Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 96 LLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp CCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred ecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence 788999999999999999999999999999999998863 4444 4 8999999999999999999999999999999
Q ss_pred CCCC--------------CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 152 RGKP--------------QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 152 ~s~~--------------~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
+... .....+..+.|...|.+++|+|++++|+++ +.|+.|++||+.....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~------------~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYA------------GHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEE------------ETTTEEC-CEECSTTS
T ss_pred EecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEE------------eCCCcEEEEECCCCCC
Confidence 6321 112233333899999999999977666554 6699999999986544
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.93 E-value=1.5e-25 Score=239.96 Aligned_cols=197 Identities=15% Similarity=0.193 Sum_probs=169.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC------cee
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS------PKV 74 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~------~~v 74 (648)
+|+|++++|++|+.||+|+|||+.+++.+..+.. |...|.+++|+|+++ +|++|+.|+.|+|||+.... ...
T Consensus 73 ~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~-h~~~v~~~~~s~~g~-~las~~~d~~v~iw~~~~~~~~~~~~~~~ 150 (380)
T 3iz6_a 73 DWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL-HCPWVMECAFAPNGQ-SVACGGLDSACSIFNLSSQADRDGNMPVS 150 (380)
T ss_dssp EECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-CCTTCCCCEECTTSS-EEEECCSSSCCEEEECCCCSSCCCSSTTC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCccceEEec-CCCCEEEEEECCCCC-EEEEeeCCCcEEEEECCCCccccCCccce
Confidence 4899999999999999999999999999998886 667788899999998 89999999999999996432 224
Q ss_pred EEeccCCCCeEEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeEe------eCCCCeEEEEEeC-CCCEEEEEEcCCeE
Q 006360 75 SWLKQHSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCI------TYEAPFSSLAFID-DDWILTAGTSNGRV 146 (648)
Q Consensus 75 ~~l~~H~~~V~slafsPd-g~~LaSgs~Dg~I~IWDl~tgk~v~~~------~h~~~I~slafsP-dG~~Lasgs~DG~V 146 (648)
..+.+|...|.++.|.|+ +.+|++|+.|++|++||+.+++.+..+ .|...|.+++|++ ++++|++|+.||.|
T Consensus 151 ~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v 230 (380)
T 3iz6_a 151 RVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTV 230 (380)
T ss_dssp CBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCE
T ss_pred eeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeE
Confidence 567899999999999995 567999999999999999999887765 4788899999987 88999999999999
Q ss_pred EEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 147 VFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 147 ~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
++||++.....+..+. +|.+.|.+++|+|++++++ +++.|+.|++||++....
T Consensus 231 ~~wd~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~l~------------s~s~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 231 RLWDLRITSRAVRTYH--GHEGDINSVKFFPDGQRFG------------TGSDDGTCRLFDMRTGHQ 283 (380)
T ss_dssp EEEETTTTCCCCEEEC--CCSSCCCEEEECTTSSEEE------------EECSSSCEEEEETTTTEE
T ss_pred EEEECCCCCcceEEEC--CcCCCeEEEEEecCCCeEE------------EEcCCCeEEEEECCCCcE
Confidence 9999986555666665 8999999999999766554 456799999999986544
No 33
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.93 E-value=2.8e-24 Score=221.86 Aligned_cols=196 Identities=17% Similarity=0.249 Sum_probs=165.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|++++|++++.||.|++||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.|+.|++||+.++.. +..+..|
T Consensus 72 ~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~-~~~~~~~ 148 (312)
T 4ery_A 72 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKC-LKTLPAH 148 (312)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCE-EEEECCC
T ss_pred EEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEE-EEEecCC
Confidence 4899999999999999999999999999999986 677899999999998 899999999999999988774 6778899
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCce
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~--~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~ 158 (648)
...|.+++|+|++++|++++.|+.|++||+++++.+..+ .+...+.+++|+|++++|++++.||.|++||+++. ..+
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~ 227 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCL 227 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT-EEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC-cEE
Confidence 999999999999999999999999999999999877665 36678999999999999999999999999999987 334
Q ss_pred EEEeecCCCCCeeE--EEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 159 TVLRACSSSEAVSS--LCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 159 ~~l~~~~h~~~Vts--Lafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
..+. +|...+.+ ..|.+ .++.++++++.|+.|++||+.....
T Consensus 228 ~~~~--~~~~~~~~~~~~~~~-----------~~~~~l~sg~~dg~i~vwd~~~~~~ 271 (312)
T 4ery_A 228 KTYT--GHKNEKYCIFANFSV-----------TGGKWIVSGSEDNLVYIWNLQTKEI 271 (312)
T ss_dssp EEEC--SSCCSSSCCCEEEEC-----------SSSCEEEECCTTSCEEEEETTTCCE
T ss_pred EEEE--ecCCceEEEEEEEEe-----------CCCcEEEEECCCCEEEEEECCCchh
Confidence 4444 45443322 23332 1455667778899999999875443
No 34
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=1.5e-24 Score=247.17 Aligned_cols=198 Identities=11% Similarity=0.163 Sum_probs=162.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCce--eEEEeC-------------------------------------------C
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAK--AAELKD-------------------------------------------P 35 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~--i~~l~~-------------------------------------------~ 35 (648)
+|+|||++||+|+.||+|+|||+.+++. ...+.+ .
T Consensus 66 ~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~g 145 (611)
T 1nr0_A 66 KTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTG 145 (611)
T ss_dssp EECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCC
T ss_pred EECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecC
Confidence 5899999999999999999999864332 222211 2
Q ss_pred CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCce
Q 006360 36 NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP 115 (648)
Q Consensus 36 ~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~ 115 (648)
|...|.+++|+|++..+|++|+.|++|++||....+. ...+.+|...|++++|+|++++|++++.|++|++||+.++++
T Consensus 146 h~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~-~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 146 QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF-KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK 224 (611)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEE-EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeE-eeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcE
Confidence 4556777888888765799999999999999887654 577899999999999999999999999999999999999988
Q ss_pred eeEe--------eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEE--------------------------
Q 006360 116 SSCI--------TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVL-------------------------- 161 (648)
Q Consensus 116 v~~~--------~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l-------------------------- 161 (648)
+..+ .|.+.|.+++|+|+|++|++++.|++|+|||+.+.+. ...+
T Consensus 225 ~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 303 (611)
T 1nr0_A 225 TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV-EKTIPVGTRIEDQQLGIIWTKQALVSISAN 303 (611)
T ss_dssp EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-EEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred eeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCce-eeeecCCCCccceeEEEEEcCCEEEEEeCC
Confidence 7766 5889999999999999999999999999999987532 1111
Q ss_pred ---------------eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCC
Q 006360 162 ---------------RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 162 ---------------~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
...+|...|++++|+|+|++|++ ++.|+.|++||+....
T Consensus 304 ~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s------------~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 304 GFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFS------------ADAEGHINSWDISTGI 357 (611)
T ss_dssp CCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE------------EETTSCEEEEETTTCC
T ss_pred CcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEE------------EeCCCcEEEEECCCCc
Confidence 12378999999999997666555 4669999999987543
No 35
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=1.4e-24 Score=242.49 Aligned_cols=185 Identities=20% Similarity=0.327 Sum_probs=162.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|||++|++++.|+.|++||. +++.+..+.+ |...|.+++|+|+++ +|++++.|+.|++||..... +..+.+|
T Consensus 392 ~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~-~~~~v~~~~~s~d~~-~l~~~~~d~~v~~w~~~~~~--~~~~~~~ 466 (577)
T 2ymu_A 392 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVWGVAFSPDDQ-TIASASDDKTVKLWNRNGQL--LQTLTGH 466 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECT-TCCEEEEEEC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTSCE--EEEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecC-CCCCeEEEEECCCCC-EEEEEcCCCEEEEEECCCCE--EEEEcCC
Confidence 48999999999999999999995 7788888886 677899999999998 89999999999999986543 6778899
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~ 159 (648)
...|++++|+|++++|++++.|+.|++||. +++++..+ .|...|++++|+|||++|++++.||.|+|||... +.+.
T Consensus 467 ~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~--~~~~ 543 (577)
T 2ymu_A 467 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQ 543 (577)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS--CEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC--CEEE
Confidence 999999999999999999999999999996 56666555 6899999999999999999999999999999643 3445
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCC
Q 006360 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (648)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWD 207 (648)
.+. +|.+.|++++|+|||++|+++ +.|++|++||
T Consensus 544 ~~~--~h~~~v~~~~fs~dg~~l~s~------------~~D~~i~~Wd 577 (577)
T 2ymu_A 544 TLT--GHSSSVWGVAFSPDGQTIASA------------SSDKTVKLWN 577 (577)
T ss_dssp EEE--CCSSCEEEEEECTTSSCEEEE------------ETTSCEEEEC
T ss_pred EEc--CCCCCEEEEEEcCCCCEEEEE------------eCCCEEEEeC
Confidence 555 899999999999977666554 6699999997
No 36
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=2.2e-25 Score=242.68 Aligned_cols=201 Identities=12% Similarity=0.113 Sum_probs=161.0
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEEe-CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 006360 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (648)
Q Consensus 1 AFSp-dG~~Lasgs~DG~V~IwDl~sg~~i~~l~-~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~ 78 (648)
+|+| ++++||+|+.||.|+|||+.+++....+. ..|...|++|+|+|.+..+|++|+.||+|+|||+++.... ....
T Consensus 126 ~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~-~~~~ 204 (435)
T 4e54_B 126 AWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR-VFAS 204 (435)
T ss_dssp EECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE-EEEC
T ss_pred EEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee-EEec
Confidence 5898 56799999999999999998776554443 2377889999999854448999999999999999876532 2222
Q ss_pred --cCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCC-EEEEEEcCCeEEEEECCCCC
Q 006360 79 --QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDW-ILTAGTSNGRVVFYDIRGKP 155 (648)
Q Consensus 79 --~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~-~Lasgs~DG~V~IWDl~s~~ 155 (648)
.+...+.+++|+|++.+|++|+.||.|++||++.........|...|.+++|+|++. +|++|+.|+.|+|||++...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 205 SDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp CSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred cCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccc
Confidence 234567899999999999999999999999998655544457999999999999875 78899999999999999865
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCc
Q 006360 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (648)
Q Consensus 156 ~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ 214 (648)
.........+|...|++++|+|+|.+|+ +++.|+.|++||+......
T Consensus 285 ~~~~~~~~~~h~~~v~~~~~spdg~~l~------------s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 285 GKASFLYSLPHRHPVNAACFSPDGARLL------------TTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp SSSCCSBCCBCSSCEEECCBCTTSSEEE------------EEESSSCEEEEESSSSSSE
T ss_pred ccceEEEeeeccccccceeECCCCCeeE------------EEcCCCEEEEEECCCCccc
Confidence 4444444457999999999999766654 4467999999999865543
No 37
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.8e-24 Score=227.00 Aligned_cols=194 Identities=14% Similarity=0.203 Sum_probs=154.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCC-------CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-C-
Q 006360 1 MYNCKDEHLASISLSGDLILHNLAS-------GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR-S- 71 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~s-------g~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~-~- 71 (648)
+|+|++++|++|+.|+.|+|||+.. .+.+..+.+ |...|.+++|+|+++ +|++|+.|++|+|||+... .
T Consensus 65 ~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~ 142 (330)
T 2hes_X 65 AWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-HENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEE 142 (330)
T ss_dssp EECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCC
T ss_pred EECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-CCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCC
Confidence 5899999999999999999999843 345566665 778899999999998 8999999999999999432 1
Q ss_pred -ceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC--ceeeEe-eCCCCeEEEEEeCC--CCEEEEEEcCCe
Q 006360 72 -PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR--RPSSCI-TYEAPFSSLAFIDD--DWILTAGTSNGR 145 (648)
Q Consensus 72 -~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tg--k~v~~~-~h~~~I~slafsPd--G~~Lasgs~DG~ 145 (648)
..+..+.+|...|.+++|+|++.+|++++.|++|++||...+ +++..+ .|...|.+++|+|+ +.+|++|+.|+.
T Consensus 143 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 143 YECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp CEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred eEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe
Confidence 235678899999999999999999999999999999998876 455555 58999999999998 779999999999
Q ss_pred EEEEECCCCCC----ceEEE-eec-CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 146 VVFYDIRGKPQ----PLTVL-RAC-SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 146 V~IWDl~s~~~----~~~~l-~~~-~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
|+|||++.... ..... ... .|...|.+++|++++ ++++++.|+.|++||+.
T Consensus 223 v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-------------~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 223 VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-------------LIASVGADGVLAVYEEV 279 (330)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-------------CEEEEETTSCEEEEEEE
T ss_pred EEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-------------EEEEEeCCCEEEEEEcC
Confidence 99999975321 01111 112 388999999998642 34556779999999975
No 38
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=2e-24 Score=249.13 Aligned_cols=178 Identities=20% Similarity=0.331 Sum_probs=153.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE---e
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW---L 77 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~---l 77 (648)
+|+|+|++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.|++|+|||+..... ... .
T Consensus 437 ~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~-h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~-~~~~~~~ 513 (694)
T 3dm0_A 437 VLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVG-HTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECK-YTISEGG 513 (694)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEE-EEECSST
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCcceeEEeC-CCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcc-eeeccCC
Confidence 4899999999999999999999999999998886 777899999999998 799999999999999876542 222 2
Q ss_pred ccCCCCeEEEEEccCC--CEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCC
Q 006360 78 KQHSAPTAGISFSSDD--KIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (648)
Q Consensus 78 ~~H~~~V~slafsPdg--~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~ 154 (648)
.+|...|.+++|+|++ .+|++++.|+.|++||++++++...+ .|...|.+++|+|+|.+|++|+.||.|+|||+++.
T Consensus 514 ~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 514 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG 593 (694)
T ss_dssp TSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT
T ss_pred CCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 4688999999999976 68999999999999999999887766 58999999999999999999999999999999987
Q ss_pred CCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006360 155 PQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 155 ~~~~~~l~~~~h~~~VtsLafspdg~~Las~ 185 (648)
. .+....+...|.+++|+|++.+++++
T Consensus 594 ~----~~~~~~~~~~v~~~~~sp~~~~l~~~ 620 (694)
T 3dm0_A 594 K----KLYSLEANSVIHALCFSPNRYWLCAA 620 (694)
T ss_dssp E----EEECCBCSSCEEEEEECSSSSEEEEE
T ss_pred c----eEEEecCCCcEEEEEEcCCCcEEEEE
Confidence 3 22333456789999999988776553
No 39
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.93 E-value=3.4e-25 Score=231.16 Aligned_cols=200 Identities=10% Similarity=0.131 Sum_probs=162.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ceeE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKVS 75 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~--~i~~l~~~~~~~V~~Vafspd--g~~lLaSgs~Dg~V~IWDl~t~~-~~v~ 75 (648)
+|+|+|++|++|+.|+.|+|||+.+++ .+..+.+ |...|.+++|+++ ++ +|++|+.|++|+|||+.++. ....
T Consensus 20 ~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~g-H~~~V~~v~~~~~~~~~-~l~s~s~D~~v~iWd~~~~~~~~~~ 97 (316)
T 3bg1_A 20 QMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRG-HEGPVWQVAWAHPMYGN-ILASCSYDRKVIIWREENGTWEKSH 97 (316)
T ss_dssp EECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEEC-CSSCEEEEEECCGGGSS-CEEEEETTSCEEEECCSSSCCCEEE
T ss_pred eEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcC-CCccEEEEEeCCCCCCC-EEEEEECCCEEEEEECCCCcceEEE
Confidence 589999999999999999999998775 4566776 7788999999863 55 89999999999999998764 2356
Q ss_pred EeccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEeCCCCcee---eEe-eCCCCeEEEEEeCC----------------
Q 006360 76 WLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRPS---SCI-TYEAPFSSLAFIDD---------------- 133 (648)
Q Consensus 76 ~l~~H~~~V~slafsPd--g~~LaSgs~Dg~I~IWDl~tgk~v---~~~-~h~~~I~slafsPd---------------- 133 (648)
.+.+|...|++++|+|+ +.+|++++.|+.|++||++.+... ..+ .|...|.+++|+|+
T Consensus 98 ~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 177 (316)
T 3bg1_A 98 EHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPN 177 (316)
T ss_dssp EECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCC
T ss_pred EccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCcc
Confidence 67899999999999997 789999999999999999876422 222 57889999999997
Q ss_pred -CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 134 -DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 134 -G~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
+.+|++|+.|+.|+|||++............+|...|.+++|+|++. .+..++++++.|+.|++||+..
T Consensus 178 ~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~--------~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 178 YIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG--------LPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSS--------CSCCEEEEEETTCEEEEEECSS
T ss_pred ccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCC--------CCCceEEEEcCCCeEEEEEccC
Confidence 47899999999999999975432222333348999999999999641 1235677778899999999865
No 40
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.93 E-value=3e-24 Score=227.80 Aligned_cols=201 Identities=11% Similarity=0.125 Sum_probs=165.6
Q ss_pred CccCCC-CEEEEEECCCcEEEEECCCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 006360 1 MYNCKD-EHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (648)
Q Consensus 1 AFSpdG-~~Lasgs~DG~V~IwDl~sg~~i~~l~~-~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~ 78 (648)
+|+|++ ++|++|+.||.|+|||+.+++....+.. .|...|.+++|+|++..+|++++.|+.|++||+.+.. +..+.
T Consensus 80 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~ 157 (383)
T 3ei3_B 80 EWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV--IQVFA 157 (383)
T ss_dssp EECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE--EEEEE
T ss_pred EECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc--eEEEe
Confidence 489999 8999999999999999998888777763 4788999999999544489999999999999998644 44444
Q ss_pred c---CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCC-EEEEEEcCCeEEEEECCC
Q 006360 79 Q---HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDW-ILTAGTSNGRVVFYDIRG 153 (648)
Q Consensus 79 ~---H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~-~Lasgs~DG~V~IWDl~s 153 (648)
. |...|.+++|+|++++|++++.|+.|++||++ ++.+..+ .|...|.+++|+|++. +|++++.|+.|++||+++
T Consensus 158 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 158 KTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp CCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred ccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 4 44889999999999999999999999999995 5555444 6899999999999998 999999999999999997
Q ss_pred CCCceEEEeecCCCCCeeEEEEcc-CCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCccc
Q 006360 154 KPQPLTVLRACSSSEAVSSLCWQR-AKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (648)
Q Consensus 154 ~~~~~~~l~~~~h~~~VtsLafsp-dg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss 216 (648)
.......+...+|...|.+++|+| ++.+++++ +.|+.|++||++.......
T Consensus 237 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~------------~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 237 IKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTT------------DQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp CCSTTCEEEEEECSSCEEEEEECTTTSCEEEEE------------ESSSEEEEEETTBTTSCSE
T ss_pred CCcccceEEEecCCCceEEEEEcCCCCCEEEEE------------cCCCcEEEEECCCCccccc
Confidence 432222333336999999999999 77666554 5699999999987665443
No 41
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.93 E-value=9.4e-25 Score=232.39 Aligned_cols=194 Identities=16% Similarity=0.251 Sum_probs=155.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEE---EeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAE---LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~---l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l 77 (648)
+|+|++. +++++.||.|+|||+.+++.... ....|...|.+|+|+|+++ +|++|+.|+.|+|||+.+++. +..+
T Consensus 101 ~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~sgs~dg~v~iwd~~~~~~-~~~~ 177 (357)
T 4g56_B 101 AWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGT-QAVSGGKDFSVKVWDLSQKAV-LKSY 177 (357)
T ss_dssp EEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTTEE-EEEE
T ss_pred EEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcE-EEEE
Confidence 5889875 45678899999999988765432 1224788999999999998 899999999999999998874 6788
Q ss_pred ccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEeCCCCceeeEe---eCCCCeEEEEEeCC-CCEEEEEEcCCeEEEEECC
Q 006360 78 KQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCI---TYEAPFSSLAFIDD-DWILTAGTSNGRVVFYDIR 152 (648)
Q Consensus 78 ~~H~~~V~slafsPdg-~~LaSgs~Dg~I~IWDl~tgk~v~~~---~h~~~I~slafsPd-G~~Lasgs~DG~V~IWDl~ 152 (648)
.+|...|++++|++++ .++++++.|+.|++||++++++...+ .+...+.+++|+|+ +.+|++|+.|+.|+|||++
T Consensus 178 ~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~ 257 (357)
T 4g56_B 178 NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK 257 (357)
T ss_dssp CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS
T ss_pred cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECC
Confidence 9999999999999976 58899999999999999998876654 36778999999997 5789999999999999999
Q ss_pred CCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 153 GKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 153 s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
+. +++..+. +|...|++++|+|++. .+|++++.|+.|+|||+...
T Consensus 258 ~~-~~~~~~~--~~~~~v~~l~~sp~~~-----------~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 258 NP-DSAQTSA--VHSQNITGLAYSYHSS-----------PFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp CG-GGCEEEC--CCSSCEEEEEECSSSS-----------CCEEEEETTSCEEEECTTSC
T ss_pred CC-cEeEEEe--ccceeEEEEEEcCCCC-----------CEEEEEeCCCEEEEEECCCC
Confidence 87 4455555 7999999999999742 34455677999999998653
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.93 E-value=9.2e-24 Score=217.21 Aligned_cols=194 Identities=17% Similarity=0.191 Sum_probs=169.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~--~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~ 78 (648)
+|+|++++|++++.||.|++||+.+++ ....+.. |...|.+++|+++++ +|++++.|+.|++||+.+.+. +..+.
T Consensus 104 ~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~~~~-~~~~~ 180 (337)
T 1gxr_A 104 KLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTS-SAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTL-VRQFQ 180 (337)
T ss_dssp EECTTSSEEEEEESSSEEEEEECCCC--EEEEEEEC-SSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE-EEEEC
T ss_pred EEcCCCCEEEEEcCCCcEEEEECCCCCcceeeeccc-CCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCce-eeeee
Confidence 489999999999999999999998877 4555554 677899999999988 899999999999999988764 67788
Q ss_pred cCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCce
Q 006360 79 QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (648)
Q Consensus 79 ~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~ 158 (648)
.|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+...+.+++|+|++.+|++++.||.|++||+++..
T Consensus 181 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~--- 257 (337)
T 1gxr_A 181 GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--- 257 (337)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC---
T ss_pred cccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC---
Confidence 89999999999999999999999999999999999998888899999999999999999999999999999999873
Q ss_pred EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 159 TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 159 ~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
......|...|.+++|+|+++++++ ++.|+.|++||+.....
T Consensus 258 -~~~~~~~~~~v~~~~~~~~~~~l~~------------~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 258 -KYQLHLHESCVLSLKFAYCGKWFVS------------TGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp -EEEECCCSSCEEEEEECTTSSEEEE------------EETTSEEEEEETTTCCE
T ss_pred -eEEEcCCccceeEEEECCCCCEEEE------------ecCCCcEEEEECCCCeE
Confidence 2234479999999999997665544 46699999999875443
No 43
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.1e-24 Score=224.44 Aligned_cols=200 Identities=12% Similarity=0.183 Sum_probs=166.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECC--CCceeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ceeE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLA--SGAKAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKVS 75 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~--sg~~i~~l~~~~~~~V~~Vafspd--g~~lLaSgs~Dg~V~IWDl~t~~-~~v~ 75 (648)
+|+|++++|++|+.||.|+|||+. +++.+..+.+ |...|.+++|+++ ++ +|++++.||.|+|||+.++. ..+.
T Consensus 18 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~ 95 (379)
T 3jrp_A 18 VLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWKEENGRWSQIA 95 (379)
T ss_dssp EECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCS-EEEEEETTSCEEEEEEETTEEEEEE
T ss_pred EEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecC-CCCcEEEEEeCCCCCCC-EEEEeccCCEEEEEEcCCCceeEee
Confidence 589999999999999999999997 4566667765 7788999999876 66 89999999999999998775 2356
Q ss_pred EeccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEeCCCCcee---eEeeCCCCeEEEEEeC-------------CCCEE
Q 006360 76 WLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRPS---SCITYEAPFSSLAFID-------------DDWIL 137 (648)
Q Consensus 76 ~l~~H~~~V~slafsPd--g~~LaSgs~Dg~I~IWDl~tgk~v---~~~~h~~~I~slafsP-------------dG~~L 137 (648)
.+..|...|.+++|+|+ +.+|++++.|+.|++||++.+... ....|...|.+++|+| ++.+|
T Consensus 96 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l 175 (379)
T 3jrp_A 96 VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 175 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEE
T ss_pred eecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEE
Confidence 77889999999999998 999999999999999999987432 3336889999999999 69999
Q ss_pred EEEEcCCeEEEEECCCCCCceEE-EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 138 TAGTSNGRVVFYDIRGKPQPLTV-LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 138 asgs~DG~V~IWDl~s~~~~~~~-l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
++++.||.|++||++........ ....+|...|.+++|+|++ ..+.++++++.|+.|++||++..
T Consensus 176 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~---------~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 176 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV---------LLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC---------SSSEEEEEEETTSCEEEEEESST
T ss_pred EEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCC---------CCCCeEEEEeCCCEEEEEeCCCC
Confidence 99999999999999876543222 2334799999999999961 01445566677999999998764
No 44
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.92 E-value=6.8e-24 Score=241.74 Aligned_cols=198 Identities=13% Similarity=0.149 Sum_probs=162.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc-eeEE---
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP-KVSW--- 76 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~-~v~~--- 76 (648)
+|+|||++|++++ ++.|+|||+.+++....+.+ |...|++++|+|+++ +|++|+.|++|+|||+.+... ....
T Consensus 25 ~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~-h~~~v~~~~~spdg~-~lasg~~d~~v~lWd~~~~~~~~~~~~~~ 101 (611)
T 1nr0_A 25 GNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTE-HSHQTTVAKTSPSGY-YCASGDVHGNVRIWDTTQTTHILKTTIPV 101 (611)
T ss_dssp EECTTSSEEEEEE-TTEEEEEETTCSSCCEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEESSSTTCCEEEEEEC
T ss_pred eeCCCCCEEEeCC-CCEEEEecCCCcccCeEecC-CCCceEEEEECCCCc-EEEEEeCCCCEEEeECCCCcceeeEeecc
Confidence 4899999999987 56999999988888888886 777899999999998 899999999999999854321 1111
Q ss_pred -----------------------------------------eccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEeCCCCc
Q 006360 77 -----------------------------------------LKQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGSRR 114 (648)
Q Consensus 77 -----------------------------------------l~~H~~~V~slafsPdg~-~LaSgs~Dg~I~IWDl~tgk 114 (648)
+.+|...|++++|+|++. +|++++.|++|++||...++
T Consensus 102 ~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~ 181 (611)
T 1nr0_A 102 FSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK 181 (611)
T ss_dssp SSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE
T ss_pred cCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe
Confidence 345677788888888765 68999999999999999888
Q ss_pred eeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEee-----cCCCCCeeEEEEccCCCeEEEeccC
Q 006360 115 PSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRA-----CSSSEAVSSLCWQRAKPVFIDETTC 188 (648)
Q Consensus 115 ~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~-----~~h~~~VtsLafspdg~~Las~~~~ 188 (648)
+...+ +|...|.+++|+|||++|++++.|+.|+|||+.++. ....+.. .+|.+.|.+++|+|+|++|++
T Consensus 182 ~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~-~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s---- 256 (611)
T 1nr0_A 182 FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT-KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS---- 256 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEE----
T ss_pred EeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc-EeeeeccccccccccCCCEEEEEECCCCCEEEE----
Confidence 77766 589999999999999999999999999999998773 3333321 169999999999997666554
Q ss_pred CCCeEEEEeeCCCeEEcCCCCCCCCc
Q 006360 189 KAETALLGGAVGDSILMPDPLPSVTT 214 (648)
Q Consensus 189 ~~~~~lvs~s~D~~IkvWDlr~~~~~ 214 (648)
++.|++|++||+......
T Consensus 257 --------~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 257 --------ASADKTIKIWNVATLKVE 274 (611)
T ss_dssp --------EETTSEEEEEETTTTEEE
T ss_pred --------EeCCCeEEEEeCCCCcee
Confidence 467999999999865443
No 45
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.92 E-value=6.1e-24 Score=227.85 Aligned_cols=198 Identities=19% Similarity=0.281 Sum_probs=169.5
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCC-------ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc
Q 006360 1 MYNC-KDEHLASISLSGDLILHNLASG-------AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (648)
Q Consensus 1 AFSp-dG~~Lasgs~DG~V~IwDl~sg-------~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~ 72 (648)
+|+| ++++|++|+.||.|+|||+.++ +.+..+.+ |...|.+++|+|+++++|++++.|+.|+|||+.+++.
T Consensus 88 ~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 166 (402)
T 2aq5_A 88 AWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG-HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA 166 (402)
T ss_dssp EECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC-CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE
T ss_pred EeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC-CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc
Confidence 4889 8999999999999999999887 56777776 7788999999999866999999999999999998875
Q ss_pred eeEEe--ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCC-eEEEEEeCCCCEEEEE---EcCC
Q 006360 73 KVSWL--KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAP-FSSLAFIDDDWILTAG---TSNG 144 (648)
Q Consensus 73 ~v~~l--~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~--~h~~~-I~slafsPdG~~Lasg---s~DG 144 (648)
+..+ ..|...|.+++|+|++.+|++++.|+.|++||+++++.+..+ .|.+. +.+++|+|++.+|++| +.|+
T Consensus 167 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~ 245 (402)
T 2aq5_A 167 -VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER 245 (402)
T ss_dssp -EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCE
T ss_pred -cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCc
Confidence 5566 789999999999999999999999999999999999988776 46555 8999999999999999 7899
Q ss_pred eEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCC
Q 006360 145 RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 145 ~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
.|++||+++...+..... ..|...|.+++|+|++++++. +++.|+.|++||+....
T Consensus 246 ~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~-----------~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 246 QVALWDTKHLEEPLSLQE-LDTSSGVLLPFFDPDTNIVYL-----------CGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEEEEETTBCSSCSEEEE-CCCCSSCEEEEEETTTTEEEE-----------EETTCSCEEEEEECSST
T ss_pred eEEEEcCccccCCceEEe-ccCCCceeEEEEcCCCCEEEE-----------EEcCCCeEEEEEecCCC
Confidence 999999998765444443 357788999999998666543 34569999999997655
No 46
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.92 E-value=1.8e-23 Score=214.97 Aligned_cols=189 Identities=11% Similarity=0.084 Sum_probs=165.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|++++|++++.||.|++||+.+++.+..+.. |...|.+++|+|+++ +|++++.|+.|++||+.+.+. +. ...|
T Consensus 148 ~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~-~~-~~~~ 223 (337)
T 1gxr_A 148 AISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQ-LQ-QHDF 223 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-EE-EEEC
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec-ccCceEEEEECCCCC-EEEEEecCCcEEEEECCCCce-Ee-eecC
Confidence 4789999999999999999999999998888876 677899999999998 899999999999999988774 22 3467
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~ 160 (648)
...|.+++|+|++++|++++.|+.|++||+++++......|...|.+++|+|++++|++++.||.|++||+.+... ...
T Consensus 224 ~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~-~~~ 302 (337)
T 1gxr_A 224 TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS-IFQ 302 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-EEE
T ss_pred CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE-EEE
Confidence 8889999999999999999999999999999988877778999999999999999999999999999999998743 222
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
..|...|.+++|+|+++++++ ++.|+.|++||+.
T Consensus 303 ---~~~~~~v~~~~~s~~~~~l~~------------~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 303 ---SKESSSVLSCDISVDDKYIVT------------GSGDKKATVYEVI 336 (337)
T ss_dssp ---EECSSCEEEEEECTTSCEEEE------------EETTSCEEEEEEE
T ss_pred ---ecCCCcEEEEEECCCCCEEEE------------ecCCCeEEEEEEe
Confidence 258899999999997665544 4669999999874
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.4e-23 Score=216.47 Aligned_cols=198 Identities=16% Similarity=0.236 Sum_probs=167.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|++++|++++.||.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++++.|+.|++||+.+++. +..+. |
T Consensus 39 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~-~ 114 (369)
T 3zwl_B 39 KYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDG-HTGTIWSIDVDCFTK-YCVTGSADYSIKLWDVSNGQC-VATWK-S 114 (369)
T ss_dssp EECTTSCEEEEEESSSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSS-EEEEEETTTEEEEEETTTCCE-EEEEE-C
T ss_pred EEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhh-cCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcE-EEEee-c
Confidence 5899999999999999999999999999998886 777899999999988 899999999999999998874 34444 8
Q ss_pred CCCeEEEEEccCCCEEEEEeCC-----CeEEEEeCCCCcee------------eEeeCCC--CeEEEEEeCCCCEEEEEE
Q 006360 81 SAPTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPS------------SCITYEA--PFSSLAFIDDDWILTAGT 141 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~D-----g~I~IWDl~tgk~v------------~~~~h~~--~I~slafsPdG~~Lasgs 141 (648)
...|.+++|+|++.+|++++.+ +.|++||+..+... ....+.. .+.+++|+|++++|++++
T Consensus 115 ~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 115 PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH 194 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE
T ss_pred CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc
Confidence 8899999999999999999999 99999999765421 1123444 899999999999999999
Q ss_pred cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCccc
Q 006360 142 SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (648)
Q Consensus 142 ~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss 216 (648)
.||.|++||+++....+..+. .|...|.+++|+|++++|++ ++.|+.|++||++.......
T Consensus 195 ~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~------------~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 195 KDGKISKYDVSNNYEYVDSID--LHEKSISDMQFSPDLTYFIT------------SSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp TTSEEEEEETTTTTEEEEEEE--CCSSCEEEEEECTTSSEEEE------------EETTSEEEEEETTTCCEEEE
T ss_pred CCCEEEEEECCCCcEeEEEEe--cCCCceeEEEECCCCCEEEE------------ecCCceEEEEECCCCceeee
Confidence 999999999998545555555 78999999999997665544 46699999999986554433
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=8.5e-24 Score=226.17 Aligned_cols=193 Identities=15% Similarity=0.226 Sum_probs=162.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc-
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ- 79 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~- 79 (648)
+|+|++++|++++.||.|++||+.+++.+..+.+ |...|.+++|+|+++ +|++++.|+.|++||+.+++. +..+..
T Consensus 146 ~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~-~~~~~~~ 222 (420)
T 3vl1_A 146 KFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG-HRATVTDIAIIDRGR-NVLSASLDGTIRLWECGTGTT-IHTFNRK 222 (420)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC-CSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTTEE-EEEECBT
T ss_pred EECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC-CCCcEEEEEEcCCCC-EEEEEcCCCcEEEeECCCCce-eEEeecC
Confidence 5899999999999999999999999999998886 778899999999998 899999999999999988764 445543
Q ss_pred --CCCCeEE---------------------EEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEeCCC
Q 006360 80 --HSAPTAG---------------------ISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDD 134 (648)
Q Consensus 80 --H~~~V~s---------------------lafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~--~h~~~I~slafsPdG 134 (648)
|...|.+ ++|+|++++|++++.||.|++||+++++.+..+ .|...|.+++|+|++
T Consensus 223 ~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 302 (420)
T 3vl1_A 223 ENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNN 302 (420)
T ss_dssp TBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSC
T ss_pred CCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCC
Confidence 3344444 455788999999999999999999998877665 377899999999999
Q ss_pred C-EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 135 W-ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 135 ~-~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
. +|++|+.||.|++||+++...++..+.. .|...|.++.|. ++ .++++++.|+.|++||+..
T Consensus 303 ~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-~~~~~v~~~~~~-~~------------~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 303 ANYIYAGYENGMLAQWDLRSPECPVGEFLI-NEGTPINNVYFA-AG------------ALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp TTEEEEEETTSEEEEEETTCTTSCSEEEEE-STTSCEEEEEEE-TT------------EEEEEETTTEEEEEEEECC
T ss_pred CCEEEEEeCCCeEEEEEcCCCcCchhhhhc-cCCCCceEEEeC-CC------------CEEEEecCCccEEEEeccC
Confidence 8 9999999999999999987666666663 367788888664 33 3556667799999999876
No 49
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=1.4e-23 Score=218.46 Aligned_cols=194 Identities=18% Similarity=0.249 Sum_probs=158.9
Q ss_pred CccCC----CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCCceeE
Q 006360 1 MYNCK----DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (648)
Q Consensus 1 AFSpd----G~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafsp-dg~~lLaSgs~Dg~V~IWDl~t~~~~v~ 75 (648)
+|+|+ |++|++|+.||.|++||+.+++.+..+.+ |...|.+++|+| ++. +|++++.||.|++||+.+++. +.
T Consensus 76 ~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~-~~ 152 (366)
T 3k26_A 76 AWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG-HGNAINELKFHPRDPN-LLLSVSKDHALRLWNIQTDTL-VA 152 (366)
T ss_dssp EEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES-CCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTTTEE-EE
T ss_pred EeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC-CCCcEEEEEECCCCCC-EEEEEeCCCeEEEEEeecCeE-EE
Confidence 36777 67999999999999999999999999886 778899999999 666 899999999999999988774 45
Q ss_pred Ee---ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee------------------------------------
Q 006360 76 WL---KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS------------------------------------ 116 (648)
Q Consensus 76 ~l---~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v------------------------------------ 116 (648)
.+ ..|...|.+++|+|++.+|++++.|+.|++||+++++..
T Consensus 153 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T 3k26_A 153 IFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRN 232 (366)
T ss_dssp EECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSS
T ss_pred EecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcc
Confidence 55 689999999999999999999999999999998754211
Q ss_pred ----------------------------------------------eEe-eCCCCeEEEEEeCC--CCEEEEEEcCCeEE
Q 006360 117 ----------------------------------------------SCI-TYEAPFSSLAFIDD--DWILTAGTSNGRVV 147 (648)
Q Consensus 117 ----------------------------------------------~~~-~h~~~I~slafsPd--G~~Lasgs~DG~V~ 147 (648)
..+ .|...|.+++|+|+ +.+|++|+.||.|+
T Consensus 233 ~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~ 312 (366)
T 3k26_A 233 YVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLY 312 (366)
T ss_dssp CCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEE
T ss_pred eEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEE
Confidence 001 24556778889998 99999999999999
Q ss_pred EEECCCCCCc---eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 148 FYDIRGKPQP---LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 148 IWDl~s~~~~---~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
+||+.+.... ...+..+.|...|++++|+|++++|++ ++.|+.|++||+.
T Consensus 313 vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s------------~~~dg~i~iwd~~ 365 (366)
T 3k26_A 313 VWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIA------------VCDDASIWRWDRL 365 (366)
T ss_dssp EEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEE------------EETTSEEEEEEC-
T ss_pred EEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEE------------EeCCCEEEEEEec
Confidence 9999986432 234443344899999999997666544 4669999999984
No 50
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.92 E-value=8.4e-24 Score=224.12 Aligned_cols=201 Identities=16% Similarity=0.170 Sum_probs=168.3
Q ss_pred CCCCE-EEEEECCCcEEEEECCC------CceeE-----EEe------CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEE
Q 006360 4 CKDEH-LASISLSGDLILHNLAS------GAKAA-----ELK------DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLW 65 (648)
Q Consensus 4 pdG~~-Lasgs~DG~V~IwDl~s------g~~i~-----~l~------~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IW 65 (648)
|++++ |++++.||.|++||+.+ ++.+. .+. ..|...|.+++|+|++ +|++++.|+.|++|
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQIS 212 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEE
Confidence 89999 99999999999999988 66665 664 3467788999999998 79999999999999
Q ss_pred ECCCCCceeEEecc---C---CCCeEEEEEccCCCEEEEEeCC---CeEEEEeCCCCceeeEe-e-------------CC
Q 006360 66 DTTGRSPKVSWLKQ---H---SAPTAGISFSSDDKIIASVGLD---KKLYTYDPGSRRPSSCI-T-------------YE 122 (648)
Q Consensus 66 Dl~t~~~~v~~l~~---H---~~~V~slafsPdg~~LaSgs~D---g~I~IWDl~tgk~v~~~-~-------------h~ 122 (648)
|+.+... +..+.. | ...|.+++|+|++.+|++++.| +.|++||+++++.+..+ . |.
T Consensus 213 d~~~~~~-~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (397)
T 1sq9_A 213 ELSTLRP-LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS 291 (397)
T ss_dssp ETTTTEE-EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBS
T ss_pred ECCCCce-eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccC
Confidence 9988764 566777 8 9999999999999999999999 99999999999888776 3 88
Q ss_pred CCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeec----CC---------------CCCeeEEEEccCCCeEE
Q 006360 123 APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRAC----SS---------------SEAVSSLCWQRAKPVFI 183 (648)
Q Consensus 123 ~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~----~h---------------~~~VtsLafspdg~~La 183 (648)
..|.+++|+|++.+|++++.||.|+|||+++. .++..+... .| ...|++++|+|++++++
T Consensus 292 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~ 370 (397)
T 1sq9_A 292 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK-ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSG 370 (397)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBS
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC-ceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccc
Confidence 99999999999999999999999999999987 344444411 45 89999999999987666
Q ss_pred EeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 184 DETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 184 s~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
.+ ..+..++++++.|+.|++||+..
T Consensus 371 ~~--~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 371 MG--ADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TT--CTTSCEEEEEETTTEEEEEEEEC
T ss_pred cc--ccccceEEEecCCCcEEEEEcCC
Confidence 65 33556788888999999999753
No 51
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.92 E-value=3.5e-23 Score=231.02 Aligned_cols=187 Identities=21% Similarity=0.334 Sum_probs=162.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|+|++|++++.||.|++||. +++.+..+.. |...|.+++|+|+++ +|++++.|+.|+|||.... .+..+.+|
T Consensus 351 ~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~-~~~~v~~~~~s~dg~-~l~~~~~d~~v~~~~~~~~--~~~~~~~~ 425 (577)
T 2ymu_A 351 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRNGQ--LLQTLTGH 425 (577)
T ss_dssp EECTTSSEEEEEETTSEEEEEET-TCCEEEEEEC-CSSCEEEEEECTTSS-CEEEEETTSEEEEECTTCC--EEEEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecC-CCCCeEEEEECCCCC-EEEEEeCCCEEEEEeCCCC--EEEEecCC
Confidence 48999999999999999999995 7788888886 677899999999998 7999999999999997543 36778899
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~ 160 (648)
...|++++|+|++++|++++.|+.|++||...........|...|.+++|+||+++|++++.|+.|+|||... +.+..
T Consensus 426 ~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~--~~~~~ 503 (577)
T 2ymu_A 426 SSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQT 503 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS--CEEEE
T ss_pred CCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC--CEEEE
Confidence 9999999999999999999999999999975433334447999999999999999999999999999999654 34455
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCC
Q 006360 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (648)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDl 208 (648)
+. +|...|++|+|+|+|++|+++ +.|+.|++||.
T Consensus 504 ~~--~h~~~v~~l~~s~dg~~l~s~------------~~dg~v~lwd~ 537 (577)
T 2ymu_A 504 LT--GHSSSVRGVAFSPDGQTIASA------------SDDKTVKLWNR 537 (577)
T ss_dssp EE--CCSSCEEEEEECTTSSCEEEE------------ETTSEEEEECT
T ss_pred Ee--CCCCCEEEEEEcCCCCEEEEE------------ECcCEEEEEeC
Confidence 55 899999999999987766555 56999999995
No 52
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.92 E-value=2.3e-23 Score=240.29 Aligned_cols=196 Identities=15% Similarity=0.203 Sum_probs=164.0
Q ss_pred CccCCC-CEEEEEECCCcEEEEECCCC-----ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 006360 1 MYNCKD-EHLASISLSGDLILHNLASG-----AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (648)
Q Consensus 1 AFSpdG-~~Lasgs~DG~V~IwDl~sg-----~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v 74 (648)
+|++++ ++|++|+.||.|+|||+.+. .....+.+ |...|.+++|+++++ +|++|+.|+.|+|||+.++.. +
T Consensus 389 ~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-h~~~v~~v~~s~~g~-~l~sgs~Dg~v~vwd~~~~~~-~ 465 (694)
T 3dm0_A 389 ATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-HSHFVEDVVLSSDGQ-FALSGSWDGELRLWDLAAGVS-T 465 (694)
T ss_dssp ECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-E
T ss_pred EecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecC-CCCcEEEEEECCCCC-EEEEEeCCCcEEEEECCCCcc-e
Confidence 467764 79999999999999998753 23456665 778899999999998 899999999999999988764 6
Q ss_pred EEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe----eCCCCeEEEEEeCCC--CEEEEEEcCCeEEE
Q 006360 75 SWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI----TYEAPFSSLAFIDDD--WILTAGTSNGRVVF 148 (648)
Q Consensus 75 ~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~----~h~~~I~slafsPdG--~~Lasgs~DG~V~I 148 (648)
..+.+|...|.+++|+|++++|++++.|++|++||+......... .|...|.+++|+|++ .+|++++.|+.|+|
T Consensus 466 ~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~v 545 (694)
T 3dm0_A 466 RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKV 545 (694)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred eEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEE
Confidence 778899999999999999999999999999999998765443332 478889999999986 68999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCc
Q 006360 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (648)
Q Consensus 149 WDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ 214 (648)
||+++. +....+. +|.+.|++++|+|++++|+ +++.|+.|++||++.....
T Consensus 546 wd~~~~-~~~~~~~--~h~~~v~~v~~spdg~~l~------------sg~~Dg~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 546 WNLSNC-KLRSTLA--GHTGYVSTVAVSPDGSLCA------------SGGKDGVVLLWDLAEGKKL 596 (694)
T ss_dssp EETTTC-CEEEEEC--CCSSCEEEEEECTTSSEEE------------EEETTSBCEEEETTTTEEE
T ss_pred EECCCC-cEEEEEc--CCCCCEEEEEEeCCCCEEE------------EEeCCCeEEEEECCCCceE
Confidence 999987 3344444 8999999999999766554 4567999999999765443
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.92 E-value=1.8e-23 Score=218.84 Aligned_cols=198 Identities=14% Similarity=0.180 Sum_probs=165.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-eEEe
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK-VSWL 77 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~--~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~-v~~l 77 (648)
+|+|++++|++++.||.|++||+.+++ .+..+.+ |...|.+++|+|+++ +|++++.|+.|++||+.+.... ...+
T Consensus 15 ~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~ 92 (372)
T 1k8k_C 15 AWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSN-RIVTCGTDRNAYVWTLKGRTWKPTLVI 92 (372)
T ss_dssp EECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTT-EEEEEETTSCEEEEEEETTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCC-EEEEEcCCCeEEEEECCCCeeeeeEEe
Confidence 589999999999999999999998887 7778876 778899999999998 8999999999999999776532 3345
Q ss_pred ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCce---eeEe--eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECC
Q 006360 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP---SSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIR 152 (648)
Q Consensus 78 ~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~---v~~~--~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~ 152 (648)
..|...|.+++|+|++++|++++.|+.|++||++.++. ...+ .|...|.+++|+|++.+|++++.||.|++||++
T Consensus 93 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 93 LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred ecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 77999999999999999999999999999999998763 2222 478899999999999999999999999999975
Q ss_pred C-----------------CCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCc
Q 006360 153 G-----------------KPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (648)
Q Consensus 153 s-----------------~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ 214 (648)
. ....+..+. .|...|.+++|+|++++++ +++.|+.|++||++.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~------------~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 173 IKEVEERPAPTPWGSKMPFGELMFESS--SSCGWVHGVCFSANGSRVA------------WVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp CTTTSCCCCCBTTBSCCCTTCEEEECC--CCSSCEEEEEECSSSSEEE------------EEETTTEEEEEEGGGTTEE
T ss_pred cccccccccccccccccchhhheEecC--CCCCeEEEEEECCCCCEEE------------EEeCCCEEEEEECCCCcee
Confidence 2 113333333 7899999999999765554 4467999999999765543
No 54
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.91 E-value=1.5e-23 Score=217.90 Aligned_cols=197 Identities=12% Similarity=0.201 Sum_probs=161.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-eeEEEeCCC---CCcEEEEE----EccCCCeEEEEEeCCCeEEEEECCCCCc
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGA-KAAELKDPN---EQVLRVLD----YSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~-~i~~l~~~~---~~~V~~Va----fspdg~~lLaSgs~Dg~V~IWDl~t~~~ 72 (648)
+|++++++|++++.||.|++||+.+++ .+..+..+. ...+.+++ |+++++ +|++++.|+.|++||+++...
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMAL 202 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTTEE
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccCce
Confidence 478999999999999999999998887 677775432 34788888 678887 899999999999999998873
Q ss_pred eeEEeccCCCCeEEEEEcc---CCCEEEEEeCCCeEEEEeCCCCceeeEe------eCCCCeEEEEEeCCCC-EEEEEEc
Q 006360 73 KVSWLKQHSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGSRRPSSCI------TYEAPFSSLAFIDDDW-ILTAGTS 142 (648)
Q Consensus 73 ~v~~l~~H~~~V~slafsP---dg~~LaSgs~Dg~I~IWDl~tgk~v~~~------~h~~~I~slafsPdG~-~Lasgs~ 142 (648)
.....|...|.+++|+| ++.+|++++.|+.|++||+++++....+ .|...|.+++|+|++. +|++++.
T Consensus 203 --~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 280 (357)
T 3i2n_A 203 --RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGG 280 (357)
T ss_dssp --EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred --eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeC
Confidence 45578899999999999 9999999999999999999887654333 5899999999999998 8999999
Q ss_pred CCeEEEEECCCCCCc----------------eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcC
Q 006360 143 NGRVVFYDIRGKPQP----------------LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMP 206 (648)
Q Consensus 143 DG~V~IWDl~s~~~~----------------~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvW 206 (648)
||.|+|||++..... ........|...|++++|+|++++++ ++++.|+.|++|
T Consensus 281 dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-----------~s~~~d~~i~iw 349 (357)
T 3i2n_A 281 AGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLC-----------VCSSFDQTVRVL 349 (357)
T ss_dssp TSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEE-----------EEEETTSEEEEE
T ss_pred CCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEE-----------EEecCCCcEEEE
Confidence 999999999865322 12233347999999999999876654 244679999999
Q ss_pred CCCCC
Q 006360 207 DPLPS 211 (648)
Q Consensus 207 Dlr~~ 211 (648)
|+...
T Consensus 350 ~~~~~ 354 (357)
T 3i2n_A 350 IVTKL 354 (357)
T ss_dssp EECC-
T ss_pred ECCCc
Confidence 98643
No 55
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.91 E-value=2.9e-24 Score=224.11 Aligned_cols=193 Identities=15% Similarity=0.208 Sum_probs=156.1
Q ss_pred CccC--CCCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCCc--
Q 006360 1 MYNC--KDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRSP-- 72 (648)
Q Consensus 1 AFSp--dG~~Lasgs~DG~V~IwDl~sg~--~i~~l~~~~~~~V~~Vafspd--g~~lLaSgs~Dg~V~IWDl~t~~~-- 72 (648)
+|++ ++++|++|+.|++|+|||+.+++ .+..+.+ |...|.+++|+|+ +. +|++|+.|+.|++||+.....
T Consensus 64 ~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~ 141 (316)
T 3bg1_A 64 AWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAG-HDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWE 141 (316)
T ss_dssp EECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECC-CSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEE
T ss_pred EeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccC-CCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcc
Confidence 3655 48999999999999999998774 4555655 7778999999998 55 899999999999999987532
Q ss_pred eeEEeccCCCCeEEEEEccC-----------------CCEEEEEeCCCeEEEEeCCCC---ceeeEe-eCCCCeEEEEEe
Q 006360 73 KVSWLKQHSAPTAGISFSSD-----------------DKIIASVGLDKKLYTYDPGSR---RPSSCI-TYEAPFSSLAFI 131 (648)
Q Consensus 73 ~v~~l~~H~~~V~slafsPd-----------------g~~LaSgs~Dg~I~IWDl~tg---k~v~~~-~h~~~I~slafs 131 (648)
....+..|...|.+++|+|+ +++|++++.|+.|++||++.. +++..+ .|...|.+++|+
T Consensus 142 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~s 221 (316)
T 3bg1_A 142 VKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWA 221 (316)
T ss_dssp ECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECC
T ss_pred eeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEec
Confidence 13456789999999999997 478999999999999999765 234334 588999999999
Q ss_pred CCC----CEEEEEEcCCeEEEEECCCCC---CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEE
Q 006360 132 DDD----WILTAGTSNGRVVFYDIRGKP---QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSIL 204 (648)
Q Consensus 132 PdG----~~Lasgs~DG~V~IWDl~s~~---~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~Ik 204 (648)
|++ .+|++++.||+|+|||+.... .....+. .|...|.+++|+|++++|+++ +.|+.|+
T Consensus 222 p~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~~las~------------~~D~~v~ 287 (316)
T 3bg1_A 222 PSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITANILAVS------------GGDNKVT 287 (316)
T ss_dssp CCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTCCEEEE------------ESSSCEE
T ss_pred CCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCCEEEEE------------cCCCeEE
Confidence 986 899999999999999998631 1223343 578999999999987766555 5699999
Q ss_pred cCCCC
Q 006360 205 MPDPL 209 (648)
Q Consensus 205 vWDlr 209 (648)
+|+..
T Consensus 288 lw~~~ 292 (316)
T 3bg1_A 288 LWKES 292 (316)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99875
No 56
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.3e-23 Score=216.66 Aligned_cols=196 Identities=13% Similarity=0.187 Sum_probs=162.9
Q ss_pred CccCC--CCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ce
Q 006360 1 MYNCK--DEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PK 73 (648)
Q Consensus 1 AFSpd--G~~Lasgs~DG~V~IwDl~sg~--~i~~l~~~~~~~V~~Vafspd--g~~lLaSgs~Dg~V~IWDl~t~~-~~ 73 (648)
+|+++ +++|++++.||.|++||+.+++ .+..+.. |...|.+++|+|+ +. +|++++.|+.|++||+.... ..
T Consensus 62 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~ 139 (379)
T 3jrp_A 62 DWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS 139 (379)
T ss_dssp EECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCC
T ss_pred EeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecC-CCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCcee
Confidence 36766 8999999999999999998887 5555654 7788999999999 76 89999999999999997763 23
Q ss_pred eEEeccCCCCeEEEEEcc-------------CCCEEEEEeCCCeEEEEeCCCCcee----eEe-eCCCCeEEEEEeCC--
Q 006360 74 VSWLKQHSAPTAGISFSS-------------DDKIIASVGLDKKLYTYDPGSRRPS----SCI-TYEAPFSSLAFIDD-- 133 (648)
Q Consensus 74 v~~l~~H~~~V~slafsP-------------dg~~LaSgs~Dg~I~IWDl~tgk~v----~~~-~h~~~I~slafsPd-- 133 (648)
...+..|...|.+++|+| ++.+|++++.|+.|++||++.+... ..+ .|...|.+++|+|+
T Consensus 140 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 219 (379)
T 3jrp_A 140 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 219 (379)
T ss_dssp EEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCC
Confidence 456778999999999999 6999999999999999999876532 223 48899999999999
Q ss_pred -CCEEEEEEcCCeEEEEECCCCCCce--EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 134 -DWILTAGTSNGRVVFYDIRGKPQPL--TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 134 -G~~Lasgs~DG~V~IWDl~s~~~~~--~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
+.+|++++.||.|+|||++...... ..+....|...|++++|+|++++|+++ +.|+.|++||+..
T Consensus 220 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~------------~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 220 LRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS------------GGDNKVTLWKENL 287 (379)
T ss_dssp SSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEE------------ESSSSEEEEEEEE
T ss_pred CCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEe------------cCCCcEEEEeCCC
Confidence 8999999999999999999864332 333333588999999999987766554 5599999999874
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.91 E-value=8.8e-23 Score=219.24 Aligned_cols=192 Identities=17% Similarity=0.258 Sum_probs=161.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|++++|++|+.||.|++||+.+++.+..+.+ |...|.+++|+ ++ +|++++.|+.|++||+......+..+..|
T Consensus 141 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~--~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 216 (401)
T 4aez_A 141 KWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG-HQARVGCLSWN--RH-VLSSGSRSGAIHHHDVRIANHQIGTLQGH 216 (401)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EECCCCCEEEEECCCCeEEEEECcCCeEEEEecC-CCCceEEEEEC--CC-EEEEEcCCCCEEEEecccCcceeeEEcCC
Confidence 5899999999999999999999999999998885 77889999994 44 89999999999999998655557888999
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCC-CEEEEEE--cCCeEEEEECCCCCC
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDD-WILTAGT--SNGRVVFYDIRGKPQ 156 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG-~~Lasgs--~DG~V~IWDl~s~~~ 156 (648)
...|.+++|+|++.+|++++.|+.|++||+++++.+..+ .|...|.+++|+|++ .++++++ .|+.|++||+++. .
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~-~ 295 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG-A 295 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC-C
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC-C
Confidence 999999999999999999999999999999999887766 588999999999976 5556654 6999999999987 3
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 157 ~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
++..+ .+...|.+++|+|+++++++.+ +..|+.|++||+..
T Consensus 296 ~~~~~---~~~~~v~~~~~s~~~~~l~~~~----------g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 296 RVNTV---DAGSQVTSLIWSPHSKEIMSTH----------GFPDNNLSIWSYSS 336 (401)
T ss_dssp EEEEE---ECSSCEEEEEECSSSSEEEEEE----------CTTTCEEEEEEEET
T ss_pred EEEEE---eCCCcEEEEEECCCCCeEEEEe----------ecCCCcEEEEecCC
Confidence 34444 3678899999999888776641 22466666666543
No 58
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=8.7e-24 Score=237.87 Aligned_cols=192 Identities=11% Similarity=0.208 Sum_probs=157.9
Q ss_pred CccCC------CCEEEEEECCCcEEEEECCCCce-----------eEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEE
Q 006360 1 MYNCK------DEHLASISLSGDLILHNLASGAK-----------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLH 63 (648)
Q Consensus 1 AFSpd------G~~Lasgs~DG~V~IwDl~sg~~-----------i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~ 63 (648)
+|+|+ +.+||+++.||+|+|||+..++. ...+.+ |...|.+++|++++ .|++|+.||+|+
T Consensus 214 ~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~-h~~~v~sv~~s~~~--~lasgs~DgtV~ 290 (524)
T 2j04_B 214 KWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL-ADSLITTFDFLSPT--TVVCGFKNGFVA 290 (524)
T ss_dssp EECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC-TTTCEEEEEESSSS--EEEEEETTSEEE
T ss_pred EECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc-CCCCEEEEEecCCC--eEEEEeCCCEEE
Confidence 36665 67999999999999999976642 234554 67889999999864 799999999999
Q ss_pred EEECCCCCceeEEeccCCCCeEEE--EEccCC-CEEEEEeCCCeEEEEeCCCCceeeEe-eCC--CCeEEEEEeCCCCEE
Q 006360 64 LWDTTGRSPKVSWLKQHSAPTAGI--SFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCI-TYE--APFSSLAFIDDDWIL 137 (648)
Q Consensus 64 IWDl~t~~~~v~~l~~H~~~V~sl--afsPdg-~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~--~~I~slafsPdG~~L 137 (648)
+||+.++......+.+|...|++| +|++++ .+|++|+.|++|+|||++++++...+ .|. ..|.+++|+|++..|
T Consensus 291 lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l 370 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY 370 (524)
T ss_dssp EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE
T ss_pred EEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeE
Confidence 999987654456688999999999 567787 89999999999999999988766554 343 358899999999999
Q ss_pred EEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 138 TAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 138 asgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
++++.|+.|+|||++.... ...+. +|.+.|++|+|+|+|++|+++ +.|++|++||+..
T Consensus 371 ~s~~~d~tv~lwd~~~~~~-~~~l~--gH~~~V~sva~Sp~g~~l~Sg------------s~Dgtv~lwd~~~ 428 (524)
T 2j04_B 371 IYSDGASSLRAVPSRAAFA-VHPLV--SRETTITAIGVSRLHPMVLAG------------SADGSLIITNAAR 428 (524)
T ss_dssp EEECSSSEEEEEETTCTTC-CEEEE--ECSSCEEEEECCSSCCBCEEE------------ETTTEEECCBSCS
T ss_pred EEeCCCCcEEEEECccccc-ceeee--cCCCceEEEEeCCCCCeEEEE------------ECCCEEEEEechH
Confidence 9999999999999998743 34444 699999999999977666554 6699999999743
No 59
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.91 E-value=2.8e-23 Score=223.67 Aligned_cols=193 Identities=14% Similarity=0.221 Sum_probs=156.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-----------eeEEEeCCCC------------CcEEEEEEccCCC-eEEEEE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGA-----------KAAELKDPNE------------QVLRVLDYSRNSR-HLLVTA 56 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~-----------~i~~l~~~~~------------~~V~~Vafspdg~-~lLaSg 56 (648)
+|+|+|++||+|+.||.|+|||+.+++ .+..+.+ |. ..|.+++|+|++. .+|+++
T Consensus 35 ~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~ 113 (447)
T 3dw8_B 35 EFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQS-HEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLS 113 (447)
T ss_dssp EECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEEC-CCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccc-ccccccccccccccCceEEEEEcCCCCcceEEEe
Confidence 589999999999999999999998776 4677776 54 7799999999973 389999
Q ss_pred eCCCeEEEEECCCCCce---------------------------------------eEEeccCCCCeEEEEEccCCCEEE
Q 006360 57 GDDGTLHLWDTTGRSPK---------------------------------------VSWLKQHSAPTAGISFSSDDKIIA 97 (648)
Q Consensus 57 s~Dg~V~IWDl~t~~~~---------------------------------------v~~l~~H~~~V~slafsPdg~~La 97 (648)
+.|+.|+|||+...... .....+|...|++++|+|++++|+
T Consensus 114 s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 193 (447)
T 3dw8_B 114 TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYL 193 (447)
T ss_dssp ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEE
T ss_pred CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEE
Confidence 99999999998653311 122468999999999999999999
Q ss_pred EEeCCCeEEEEeCCC-CceeeEe--------eCCCCeEEEEEeCCC-CEEEEEEcCCeEEEEECCCCCCc---eEEEeec
Q 006360 98 SVGLDKKLYTYDPGS-RRPSSCI--------TYEAPFSSLAFIDDD-WILTAGTSNGRVVFYDIRGKPQP---LTVLRAC 164 (648)
Q Consensus 98 Sgs~Dg~I~IWDl~t-gk~v~~~--------~h~~~I~slafsPdG-~~Lasgs~DG~V~IWDl~s~~~~---~~~l~~~ 164 (648)
++ .|+.|++||++. ++.+..+ .|...|.+++|+|++ ++|++|+.||.|+|||+++.... ...+.
T Consensus 194 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-- 270 (447)
T 3dw8_B 194 SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFE-- 270 (447)
T ss_dssp EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEEC--
T ss_pred Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEec--
Confidence 98 799999999994 4455432 588999999999998 99999999999999999987431 45555
Q ss_pred CCCC------------CeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 165 SSSE------------AVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 165 ~h~~------------~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
.|.. .|.+++|+|+|++|++ ++. +.|++||++.
T Consensus 271 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~------------~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 271 EPEDPSNRSFFSEIISSISDVKFSHSGRYMMT------------RDY-LSVKVWDLNM 315 (447)
T ss_dssp CC-----CCHHHHHTTCEEEEEECTTSSEEEE------------EES-SEEEEEETTC
T ss_pred cCCCccccccccccCceEEEEEECCCCCEEEE------------eeC-CeEEEEeCCC
Confidence 5554 8999999997666554 455 9999999986
No 60
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.5e-22 Score=210.46 Aligned_cols=194 Identities=13% Similarity=0.198 Sum_probs=160.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCC---------------------------------------------
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDP--------------------------------------------- 35 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~--------------------------------------------- 35 (648)
+|+|++++|++++.||.|++||+.+++.+..+...
T Consensus 81 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 81 DVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc
Confidence 47788888888888888888888776655544310
Q ss_pred -----------CC--CcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCC
Q 006360 36 -----------NE--QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD 102 (648)
Q Consensus 36 -----------~~--~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~D 102 (648)
+. ..+.+++|+++++ +|++++.||.|++||+.+....+..+..|...|.+++|+|++.+|++++.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 239 (369)
T 3zwl_B 161 VSEEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRD 239 (369)
T ss_dssp ECSSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred cccceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCC
Confidence 11 1567777777777 788888999999999987444577888899999999999999999999999
Q ss_pred CeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCC--------------eEEEEECCCCCCceEEEeecCCCC
Q 006360 103 KKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNG--------------RVVFYDIRGKPQPLTVLRACSSSE 168 (648)
Q Consensus 103 g~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG--------------~V~IWDl~s~~~~~~~l~~~~h~~ 168 (648)
+.|++||+++++.+..+.+...+.+++|+|++.++++++.++ .|++||+... .++..+. +|..
T Consensus 240 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~~~~--~~~~ 316 (369)
T 3zwl_B 240 TNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE-EEIGRVQ--GHFG 316 (369)
T ss_dssp SEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC-CEEEEEE--CCSS
T ss_pred ceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC-cchhhee--cccC
Confidence 999999999999999888999999999999999999999988 8999999987 3445554 7999
Q ss_pred CeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 169 AVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 169 ~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
.|++++|+|++++|++ ++.|+.|++||+..
T Consensus 317 ~v~~~~~s~~~~~l~s------------~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 317 PLNTVAISPQGTSYAS------------GGEDGFIRLHHFEK 346 (369)
T ss_dssp CEEEEEECTTSSEEEE------------EETTSEEEEEEECH
T ss_pred cEEEEEECCCCCEEEE------------EcCCCeEEEEECcc
Confidence 9999999997665544 46699999999864
No 61
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.91 E-value=1.2e-22 Score=219.74 Aligned_cols=195 Identities=13% Similarity=0.188 Sum_probs=149.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc-
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ- 79 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~- 79 (648)
+|+|+|++|++|+.||.|+|||+.+++++..+.+ |...+.++.|+ +. +|++|+.|+.+++||.......+..+.+
T Consensus 154 ~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~-h~~~v~~~s~~--~~-~l~sgs~d~~i~~~d~~~~~~~~~~~~~h 229 (420)
T 4gga_A 154 AWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS-HSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRVAEHHVATLSGH 229 (420)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeC-CCCceEEEeeC--CC-EEEEEeCCCceeEeeecccceeeEEeccc
Confidence 5899999999999999999999999999999986 66778877775 44 8999999999999998654433333333
Q ss_pred ---------------------------------------------CCCCeEEEEEcc-CCCEEEEE--eCCCeEEEEeCC
Q 006360 80 ---------------------------------------------HSAPTAGISFSS-DDKIIASV--GLDKKLYTYDPG 111 (648)
Q Consensus 80 ---------------------------------------------H~~~V~slafsP-dg~~LaSg--s~Dg~I~IWDl~ 111 (648)
|...|.+++|+| +..+++++ +.|++|++||+.
T Consensus 230 ~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~ 309 (420)
T 4gga_A 230 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 309 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT
T ss_pred ccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC
Confidence 444555666665 33344332 356666666666
Q ss_pred CCceeeEeeCCCCeEEEEEeCCCCEEEEEE--cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCC
Q 006360 112 SRRPSSCITYEAPFSSLAFIDDDWILTAGT--SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCK 189 (648)
Q Consensus 112 tgk~v~~~~h~~~I~slafsPdG~~Lasgs--~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~ 189 (648)
++++...+.+...+.++.|++++..+++++ .|+.|+|||+.+. .++..+. +|.+.|++|+|+|+|++|+++
T Consensus 310 t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~-~~v~~l~--gH~~~V~~l~~spdg~~l~S~---- 382 (420)
T 4gga_A 310 SGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELK--GHTSRVLSLTMSPDGATVASA---- 382 (420)
T ss_dssp TTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEEC--CCSSCEEEEEECTTSSCEEEE----
T ss_pred ccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC-cEEEEEc--CCCCCEEEEEEcCCCCEEEEE----
Confidence 666666666677888999999999988776 6899999999987 4455555 899999999999977666554
Q ss_pred CCeEEEEeeCCCeEEcCCCCCCCCc
Q 006360 190 AETALLGGAVGDSILMPDPLPSVTT 214 (648)
Q Consensus 190 ~~~~lvs~s~D~~IkvWDlr~~~~~ 214 (648)
+.|++|++||+....+.
T Consensus 383 --------s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 383 --------AADETLRLWRCFELDPA 399 (420)
T ss_dssp --------ETTTEEEEECCSCSSCC
T ss_pred --------ecCCeEEEEECCCCCcc
Confidence 66999999999765443
No 62
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.91 E-value=9.3e-24 Score=224.84 Aligned_cols=198 Identities=14% Similarity=0.219 Sum_probs=167.2
Q ss_pred CccCC-CCEEEEEECCCcEEEEECCCCceeEEEeCCC-----CCcEEEEEEccCCCeEEEEEeCCC---eEEEEECCCCC
Q 006360 1 MYNCK-DEHLASISLSGDLILHNLASGAKAAELKDPN-----EQVLRVLDYSRNSRHLLVTAGDDG---TLHLWDTTGRS 71 (648)
Q Consensus 1 AFSpd-G~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~-----~~~V~~Vafspdg~~lLaSgs~Dg---~V~IWDl~t~~ 71 (648)
+|+|+ +.+|++++.||.|++||+.+++.+..+..+. ...|.+++|+|++..+|++++.|+ .|++||++...
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC
Confidence 47888 6899999999999999999999988887643 778999999999866899999998 99999998864
Q ss_pred ceeEEec-cCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCC-CEEEEEEcCCeEE
Q 006360 72 PKVSWLK-QHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDD-WILTAGTSNGRVV 147 (648)
Q Consensus 72 ~~v~~l~-~H~~~V~slafsP-dg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG-~~Lasgs~DG~V~ 147 (648)
..+..+. +|...|.+++|+| ++.+|++++.|+.|++||+++++.+..+ .|...|.+++|+|++ .+|++++.||.|+
T Consensus 252 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 252 TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 4456677 8999999999999 9999999999999999999999988776 588999999999998 8999999999999
Q ss_pred EEECCCCCCceEE--------------Eee------------------cCCCCCeeEEEEccCCCeEEEeccCCCCeEEE
Q 006360 148 FYDIRGKPQPLTV--------------LRA------------------CSSSEAVSSLCWQRAKPVFIDETTCKAETALL 195 (648)
Q Consensus 148 IWDl~s~~~~~~~--------------l~~------------------~~h~~~VtsLafspdg~~Las~~~~~~~~~lv 195 (648)
|||+......... +.. ..|..++.+++|+|+|++|+++
T Consensus 332 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~---------- 401 (416)
T 2pm9_A 332 VQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQIT---------- 401 (416)
T ss_dssp EEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBC----------
T ss_pred EEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEe----------
Confidence 9999875432111 000 0166788899999977776665
Q ss_pred EeeCCCeEEcCCCCC
Q 006360 196 GGAVGDSILMPDPLP 210 (648)
Q Consensus 196 s~s~D~~IkvWDlr~ 210 (648)
+.|+.|++||+..
T Consensus 402 --~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 402 --PDGKGVSITNPKI 414 (416)
T ss_dssp --TTSSCBCCBCCCC
T ss_pred --CCCCeEEEEEecc
Confidence 5699999999864
No 63
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.91 E-value=6.4e-23 Score=214.67 Aligned_cols=193 Identities=8% Similarity=0.029 Sum_probs=162.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEe-CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc---eeEE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---KVSW 76 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~-~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~---~v~~ 76 (648)
+|+|++++|++++.||.|++||+.+++....+. ..|...|.+++|+++++ +|++++.|+.|++||+..... ....
T Consensus 59 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~ 137 (372)
T 1k8k_C 59 DWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHI 137 (372)
T ss_dssp EEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEE
T ss_pred EEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeee
Confidence 488999999999999999999998887655443 34678899999999998 899999999999999987652 2334
Q ss_pred eccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCC------------------CCceeeEe-eCCCCeEEEEEeCCCCEE
Q 006360 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPG------------------SRRPSSCI-TYEAPFSSLAFIDDDWIL 137 (648)
Q Consensus 77 l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~------------------tgk~v~~~-~h~~~I~slafsPdG~~L 137 (648)
...|...|.+++|+|++++|++++.|+.|++||++ .++++..+ .|...|.+++|+|++.+|
T Consensus 138 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 217 (372)
T 1k8k_C 138 KKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRV 217 (372)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEE
T ss_pred ecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEE
Confidence 46789999999999999999999999999999954 56666666 588899999999999999
Q ss_pred EEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 138 TAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 138 asgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
++++.||.|++||+++. .++..+. .|...|.+++|+|+++++++ + .|+.|++||+..
T Consensus 218 ~~~~~d~~i~i~d~~~~-~~~~~~~--~~~~~v~~~~~~~~~~~l~~------------~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 218 AWVSHDSTVCLADADKK-MAVATLA--SETLPLLAVTFITESSLVAA------------G-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEETTTEEEEEEGGGT-TEEEEEE--CSSCCEEEEEEEETTEEEEE------------E-TTSSCEEEEEET
T ss_pred EEEeCCCEEEEEECCCC-ceeEEEc--cCCCCeEEEEEecCCCEEEE------------E-eCCeEEEEEccC
Confidence 99999999999999987 3455555 78889999999996554433 3 588999998876
No 64
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=4.8e-23 Score=214.14 Aligned_cols=179 Identities=19% Similarity=0.295 Sum_probs=149.8
Q ss_pred CccCC---CCEEEEEECCCcEEEEECCC-Ccee-EEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE
Q 006360 1 MYNCK---DEHLASISLSGDLILHNLAS-GAKA-AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (648)
Q Consensus 1 AFSpd---G~~Lasgs~DG~V~IwDl~s-g~~i-~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~ 75 (648)
+|+|+ |++|++|+.||.|+|||+.+ +..+ ..+.+ |...|.+++|+|+++ +|++++.||.|++||+.+... .
T Consensus 46 ~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~--~ 121 (368)
T 3mmy_A 46 SFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGS-KVFTASCDKTAKMWDLSSNQA--I 121 (368)
T ss_dssp EECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE--E
T ss_pred EEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCC-EEEEEcCCCcEEEEEcCCCCc--e
Confidence 48888 69999999999999999987 5555 45554 788899999999998 899999999999999998873 4
Q ss_pred EeccCCCCeEEEEE--ccCCCEEEEEeCCCeEEEEeCCCCceeeEee---------------------------------
Q 006360 76 WLKQHSAPTAGISF--SSDDKIIASVGLDKKLYTYDPGSRRPSSCIT--------------------------------- 120 (648)
Q Consensus 76 ~l~~H~~~V~slaf--sPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~--------------------------------- 120 (648)
.+..|...|.+++| ++++.+|++++.|+.|++||+++++.+..+.
T Consensus 122 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 201 (368)
T 3mmy_A 122 QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQP 201 (368)
T ss_dssp EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSC
T ss_pred eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEecccc
Confidence 46789999999999 8899999999999999999998764321110
Q ss_pred ----------------------------------------------------------CCC------------CeEEEEE
Q 006360 121 ----------------------------------------------------------YEA------------PFSSLAF 130 (648)
Q Consensus 121 ----------------------------------------------------------h~~------------~I~slaf 130 (648)
|.. .|.+++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 281 (368)
T 3mmy_A 202 SEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAF 281 (368)
T ss_dssp EEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEE
T ss_pred chhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEE
Confidence 111 5999999
Q ss_pred eCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEec
Q 006360 131 IDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDET 186 (648)
Q Consensus 131 sPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~ 186 (648)
+|++.+|++++.||.|+|||+.+. .++..+. .|...|.+++|+|+|++|++++
T Consensus 282 sp~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~--~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 282 HPVHGTLATVGSDGRFSFWDKDAR-TKLKTSE--QLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp CTTTCCEEEEETTSCEEEEETTTT-EEEEECC--CCSSCEEEEEECTTSSCEEEEE
T ss_pred ecCCCEEEEEccCCeEEEEECCCC-cEEEEec--CCCCCceEEEECCCCCeEEEEe
Confidence 999999999999999999999987 3344444 7899999999999888877763
No 65
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.91 E-value=1.9e-22 Score=208.46 Aligned_cols=194 Identities=16% Similarity=0.239 Sum_probs=161.3
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCC-eEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSR-HLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~-~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
|++++++|++++.|+.+++||+............|...+.+++|++++. .++++++.|+.|++||+.+... +..+.+|
T Consensus 136 ~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~-~~~~~~h 214 (340)
T 4aow_A 136 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL-KTNHIGH 214 (340)
T ss_dssp ECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE-EEEECCC
T ss_pred EeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce-eeEecCC
Confidence 5788999999999999999998766555544445788899999998753 3678999999999999998874 6778899
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~ 160 (648)
...|++++|+|++++|++++.|+.|++||+++.+.+..+.+...|.+++|+|++.++ +++.|+.|+|||+++.. .+..
T Consensus 215 ~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~-~~~~ 292 (340)
T 4aow_A 215 TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKI-IVDE 292 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTE-EEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCcee-eccCCCEEEEEECCCCe-EEEe
Confidence 999999999999999999999999999999999999988888999999999987655 56679999999998752 2222
Q ss_pred E-------eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 161 L-------RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 161 l-------~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
+ ....|...|++++|+|+|++|++ ++.|+.|++||+..
T Consensus 293 ~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s------------gs~Dg~v~iW~~~t 337 (340)
T 4aow_A 293 LKQEVISTSSKAEPPQCTSLAWSADGQTLFA------------GYTDNLVRVWQVTI 337 (340)
T ss_dssp ECCC-------CCCCCEEEEEECTTSSEEEE------------EETTSCEEEEEEEC
T ss_pred ccccceeeeccCCCCCEEEEEECCCCCEEEE------------EeCCCEEEEEeCCC
Confidence 2 12368899999999997666554 46699999999853
No 66
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.91 E-value=5.6e-23 Score=213.47 Aligned_cols=200 Identities=14% Similarity=0.202 Sum_probs=165.0
Q ss_pred CccCC---CCEEEEEECCCcEEEEECCCCc-eeEEEeCCCCCcEEEEEE------ccCCCeEEEEEeCCCeEEEEECCCC
Q 006360 1 MYNCK---DEHLASISLSGDLILHNLASGA-KAAELKDPNEQVLRVLDY------SRNSRHLLVTAGDDGTLHLWDTTGR 70 (648)
Q Consensus 1 AFSpd---G~~Lasgs~DG~V~IwDl~sg~-~i~~l~~~~~~~V~~Vaf------spdg~~lLaSgs~Dg~V~IWDl~t~ 70 (648)
+|+|+ +++|++++.||.|++||+.+++ .+..+.+ |...|.+++| +++++ +|++++.|+.|++||+...
T Consensus 72 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~ 149 (357)
T 3i2n_A 72 TFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKG-HKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQK 149 (357)
T ss_dssp ECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECC-CSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSC
T ss_pred EEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEe-cccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCC
Confidence 47887 7999999999999999999888 7777775 7788899955 67787 8999999999999999887
Q ss_pred CceeEEeccCCC----CeEEEE----EccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeC---CCCEEEE
Q 006360 71 SPKVSWLKQHSA----PTAGIS----FSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFID---DDWILTA 139 (648)
Q Consensus 71 ~~~v~~l~~H~~----~V~sla----fsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsP---dG~~Las 139 (648)
...+..+..|.. .|.+++ |+|++.+|++++.|+.|++||+++++......|...|.+++|+| ++.+|++
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 229 (357)
T 3i2n_A 150 DDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVA 229 (357)
T ss_dssp SSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEE
T ss_pred CCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEE
Confidence 644566666554 799998 67899999999999999999999999887788999999999999 9999999
Q ss_pred EEcCCeEEEEECCCCCCceE--EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 140 GTSNGRVVFYDIRGKPQPLT--VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 140 gs~DG~V~IWDl~s~~~~~~--~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
++.||.|++||+++...... .....+|...|++++|+|+++ .++++++.|+.|++||++....
T Consensus 230 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----------~~l~~~~~dg~i~iwd~~~~~~ 294 (357)
T 3i2n_A 230 TSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR-----------ELFLTAGGAGGLHLWKYEYPIQ 294 (357)
T ss_dssp EESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE-----------EEEEEEETTSEEEEEEEECCSC
T ss_pred ECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC-----------cEEEEEeCCCcEEEeecCCCcc
Confidence 99999999999987533211 112237999999999999654 1455667799999999875443
No 67
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.91 E-value=1.1e-22 Score=215.64 Aligned_cols=206 Identities=15% Similarity=0.178 Sum_probs=168.8
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEEeCCC--CCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006360 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELKDPN--EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (648)
Q Consensus 1 AFSp-dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~--~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l 77 (648)
+|+| ++++|++++.|+.|++||+.. ..+..+..++ ...|.+++|+|+++ +|++++.|+.|++||++.. .+..+
T Consensus 125 ~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~--~~~~~ 200 (383)
T 3ei3_B 125 KFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLDGH--EIFKE 200 (383)
T ss_dssp EEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETTSC--EEEEE
T ss_pred EeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECCCC--EEEEe
Confidence 4788 678999999999999999974 6666666543 46799999999998 8999999999999999543 36788
Q ss_pred ccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEeCCC----CceeeEeeCCCCeEEEEEeC-CCCEEEEEEcCCeEEEEEC
Q 006360 78 KQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGS----RRPSSCITYEAPFSSLAFID-DDWILTAGTSNGRVVFYDI 151 (648)
Q Consensus 78 ~~H~~~V~slafsPdg~-~LaSgs~Dg~I~IWDl~t----gk~v~~~~h~~~I~slafsP-dG~~Lasgs~DG~V~IWDl 151 (648)
..|...|.+++|+|++. +|++++.|+.|++||+++ +.++..+.|...|.+++|+| ++.+|++++.|+.|+|||+
T Consensus 201 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~ 280 (383)
T 3ei3_B 201 KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSS 280 (383)
T ss_dssp ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEET
T ss_pred ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEEC
Confidence 89999999999999998 999999999999999998 66777778999999999999 9999999999999999999
Q ss_pred CCCCCceEEEe----ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCc
Q 006360 152 RGKPQPLTVLR----ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (648)
Q Consensus 152 ~s~~~~~~~l~----~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ 214 (648)
++......... ...|...+. +.|+|++.+++.+. ..++.+ +++.|+.|++||+......
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~-s~dg~~--s~s~d~~i~iwd~~~~~~~ 343 (383)
T 3ei3_B 281 YDWSKPDQIIIHPHRQFQHLTPIK-ATWHPMYDLIVAGR-YPDDQL--LLNDKRTIDIYDANSGGLV 343 (383)
T ss_dssp TBTTSCSEEEECCBCCCTTSCCCC-CEECSSSSEEEEEC-BCCTTT--CTTCCCCEEEEETTTCCEE
T ss_pred CCCccccccccccccccccccceE-EeccCCCCceEEEe-cCCccc--ccCCCCeEEEEecCCCcee
Confidence 98754433321 113455666 58999888877653 234444 7778999999999765543
No 68
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.91 E-value=5.4e-23 Score=223.65 Aligned_cols=197 Identities=20% Similarity=0.315 Sum_probs=166.2
Q ss_pred CccCC-CCEEEEEECCCcEEEEECCC----------CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Q 006360 1 MYNCK-DEHLASISLSGDLILHNLAS----------GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG 69 (648)
Q Consensus 1 AFSpd-G~~Lasgs~DG~V~IwDl~s----------g~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t 69 (648)
+|+|+ +++|++++.||.|+|||+.+ ...+..+.+ |...|.+++|++++..+|++|+.||.|+|||+..
T Consensus 135 ~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 213 (430)
T 2xyi_A 135 RYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRG-HQKEGYGLSWNPNLNGYLLSASDDHTICLWDINA 213 (430)
T ss_dssp EEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEEC-CSSCCCCEEECTTSTTEEEEECTTSCEEEEETTS
T ss_pred EECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecC-CCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCC
Confidence 47887 67899999999999999976 567777776 6678899999999887899999999999999977
Q ss_pred CCc---e---eEEeccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCC---ceeeEe-eCCCCeEEEEEeCCCC-EE
Q 006360 70 RSP---K---VSWLKQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSR---RPSSCI-TYEAPFSSLAFIDDDW-IL 137 (648)
Q Consensus 70 ~~~---~---v~~l~~H~~~V~slafsP-dg~~LaSgs~Dg~I~IWDl~tg---k~v~~~-~h~~~I~slafsPdG~-~L 137 (648)
... . ...+..|...|.+++|+| ++.+|++++.|+.|++||++++ +.+..+ .|...|.+++|+|++. +|
T Consensus 214 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l 293 (430)
T 2xyi_A 214 TPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFIL 293 (430)
T ss_dssp CCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEE
T ss_pred CCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEE
Confidence 321 1 345678999999999999 7889999999999999999987 455444 6889999999999886 78
Q ss_pred EEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 138 TAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 138 asgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
++|+.||.|+|||++....++..+. .|...|++++|+|++++ ++++++.|+.|++||+...
T Consensus 294 ~tg~~dg~v~vwd~~~~~~~~~~~~--~h~~~v~~i~~sp~~~~-----------~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 294 ATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNET-----------ILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp EEEETTSEEEEEETTCTTSCSEEEE--CCSSCEEEEEECSSCTT-----------EEEEEETTSCCEEEEGGGT
T ss_pred EEEeCCCeEEEEeCCCCCCCeEEee--cCCCCEEEEEECCCCCC-----------EEEEEeCCCcEEEEeCCCC
Confidence 8999999999999998666677776 78999999999997543 4555677999999999753
No 69
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.90 E-value=4.8e-23 Score=214.37 Aligned_cols=197 Identities=14% Similarity=0.137 Sum_probs=159.5
Q ss_pred CccCC----CCEEEEEECCCcEEEEECCCCceeEEEeC----CCCCcEEEEEEccCCC---eEEEEEeCCCeEEEEECCC
Q 006360 1 MYNCK----DEHLASISLSGDLILHNLASGAKAAELKD----PNEQVLRVLDYSRNSR---HLLVTAGDDGTLHLWDTTG 69 (648)
Q Consensus 1 AFSpd----G~~Lasgs~DG~V~IwDl~sg~~i~~l~~----~~~~~V~~Vafspdg~---~lLaSgs~Dg~V~IWDl~t 69 (648)
+|+|+ ...+++++.++.|+|||+.+++.+..+.. .+...|.+++|++++. .+|++|+.||.|+|||+.+
T Consensus 25 ~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 104 (366)
T 3k26_A 25 QFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT 104 (366)
T ss_dssp EECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT
T ss_pred EEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh
Confidence 46763 45667777788999999988887766653 2557899999999832 3899999999999999998
Q ss_pred CCceeEEeccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeEe----eCCCCeEEEEEeCCCCEEEEEEcCC
Q 006360 70 RSPKVSWLKQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI----TYEAPFSSLAFIDDDWILTAGTSNG 144 (648)
Q Consensus 70 ~~~~v~~l~~H~~~V~slafsP-dg~~LaSgs~Dg~I~IWDl~tgk~v~~~----~h~~~I~slafsPdG~~Lasgs~DG 144 (648)
.+. +..+.+|...|.+++|+| ++.+|++++.|+.|++||+++++.+..+ .|...|.+++|+|++.+|++++.||
T Consensus 105 ~~~-~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 183 (366)
T 3k26_A 105 MQC-IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH 183 (366)
T ss_dssp CCE-EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceE-eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCC
Confidence 775 677889999999999999 9999999999999999999999988776 5899999999999999999999999
Q ss_pred eEEEEECCCCCCce-------------------------EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeC
Q 006360 145 RVVFYDIRGKPQPL-------------------------TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAV 199 (648)
Q Consensus 145 ~V~IWDl~s~~~~~-------------------------~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~ 199 (648)
.|++||+++..... .......|...|.+++|+ +. ++++++.
T Consensus 184 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~------------~l~~~~~ 249 (366)
T 3k26_A 184 SLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD------------LILSKSC 249 (366)
T ss_dssp CEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT------------EEEEECS
T ss_pred CEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC------------EEEEEec
Confidence 99999998652110 001112488999999997 33 4455566
Q ss_pred CCeEEcCCCCCCC
Q 006360 200 GDSILMPDPLPSV 212 (648)
Q Consensus 200 D~~IkvWDlr~~~ 212 (648)
|+.|++||++...
T Consensus 250 d~~i~~wd~~~~~ 262 (366)
T 3k26_A 250 ENAIVCWKPGKME 262 (366)
T ss_dssp SSEEEEEEESSTT
T ss_pred CCEEEEEeCCCcc
Confidence 8889999876543
No 70
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.90 E-value=1.7e-22 Score=234.99 Aligned_cols=207 Identities=12% Similarity=0.155 Sum_probs=173.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|+|++|++++.||.|+|||+.+++.+..+.. |...|.+++|+|+++ +|++++.||.|+|||+.+++. +..+..|
T Consensus 20 ~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~~~-~~~~~~~ 96 (814)
T 3mkq_A 20 DFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQV-TETPVRAGKFIARKN-WIIVGSDDFRIRVFNYNTGEK-VVDFEAH 96 (814)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGT-EEEEEETTSEEEEEETTTCCE-EEEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCceEEEEec-CCCcEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcE-EEEEecC
Confidence 5899999999999999999999999999999986 778899999999998 899999999999999998874 6778899
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCC-ceeeEe-eCCCCeEEEEEeC-CCCEEEEEEcCCeEEEEECCCCCCc
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR-RPSSCI-TYEAPFSSLAFID-DDWILTAGTSNGRVVFYDIRGKPQP 157 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tg-k~v~~~-~h~~~I~slafsP-dG~~Lasgs~DG~V~IWDl~s~~~~ 157 (648)
...|.+++|+|++++|++++.||.|++||+.++ .....+ .|...|.+++|+| ++.+|++++.||.|++||+......
T Consensus 97 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~ 176 (814)
T 3mkq_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCS
T ss_pred CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 999999999999999999999999999999987 444444 5889999999999 8899999999999999999876443
Q ss_pred eEEEeecCCCCCeeEEEEcc--CCCeEEEecc------------------------------CCCCeEEEEeeCCCeEEc
Q 006360 158 LTVLRACSSSEAVSSLCWQR--AKPVFIDETT------------------------------CKAETALLGGAVGDSILM 205 (648)
Q Consensus 158 ~~~l~~~~h~~~VtsLafsp--dg~~Las~~~------------------------------~~~~~~lvs~s~D~~Ikv 205 (648)
..... .+...|.+++|+| ++.++++++. ..++.++++++.|+.|++
T Consensus 177 ~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~v 254 (814)
T 3mkq_A 177 FTLTT--GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKI 254 (814)
T ss_dssp EEEEC--CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred eEEec--CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 33322 4558899999998 7777776432 123345666666777777
Q ss_pred CCCCCCC
Q 006360 206 PDPLPSV 212 (648)
Q Consensus 206 WDlr~~~ 212 (648)
||+....
T Consensus 255 wd~~~~~ 261 (814)
T 3mkq_A 255 WNSSTYK 261 (814)
T ss_dssp EETTTCS
T ss_pred EECCCCc
Confidence 7766543
No 71
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.90 E-value=3.6e-23 Score=220.27 Aligned_cols=201 Identities=14% Similarity=0.314 Sum_probs=165.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCC----CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC-----
Q 006360 1 MYNCKDEHLASISLSGDLILHNLAS----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS----- 71 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~s----g~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~----- 71 (648)
+|+|++++|++++.||.|++||+.+ .+.+..+.. |...|.+++|+|++..+|++++.|+.|++||+.+..
T Consensus 74 ~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 152 (416)
T 2pm9_A 74 DWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSN-HSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN 152 (416)
T ss_dssp EECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCC-SSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT
T ss_pred EECCCCCeEEEEccCCeEEEeecccccccccchhhccC-CccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc
Confidence 4899999999999999999999987 346667765 777899999999844489999999999999998765
Q ss_pred -ce--eEEeccCCCCeEEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeEeeC-------CCCeEEEEEeCCC-CEEEE
Q 006360 72 -PK--VSWLKQHSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCITY-------EAPFSSLAFIDDD-WILTA 139 (648)
Q Consensus 72 -~~--v~~l~~H~~~V~slafsPd-g~~LaSgs~Dg~I~IWDl~tgk~v~~~~h-------~~~I~slafsPdG-~~Las 139 (648)
.. ...+..|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+.. ...|.+++|+|++ .+|++
T Consensus 153 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 153 YTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred ccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 22 2234679999999999998 79999999999999999999988877743 6889999999997 68999
Q ss_pred EEcCC---eEEEEECCCCCCceEEEeecCCCCCeeEEEEcc-CCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcc
Q 006360 140 GTSNG---RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR-AKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (648)
Q Consensus 140 gs~DG---~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafsp-dg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~s 215 (648)
++.|+ .|++||+++...+...+. .+|...|.+++|+| +++++++ ++.|+.|++||++......
T Consensus 233 ~~~d~~~~~i~~~d~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~l~s------------~~~dg~v~~wd~~~~~~~~ 299 (416)
T 2pm9_A 233 ATGSDNDPSILIWDLRNANTPLQTLN-QGHQKGILSLDWCHQDEHLLLS------------SGRDNTVLLWNPESAEQLS 299 (416)
T ss_dssp EECCSSSCCCCEEETTSTTSCSBCCC-SCCSSCEEEEEECSSCSSCEEE------------EESSSEEEEECSSSCCEEE
T ss_pred EECCCCCceEEEEeCCCCCCCcEEee-cCccCceeEEEeCCCCCCeEEE------------EeCCCCEEEeeCCCCccce
Confidence 99998 999999998644444332 15889999999999 6555544 4669999999998665443
No 72
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=5.1e-23 Score=216.38 Aligned_cols=193 Identities=9% Similarity=0.019 Sum_probs=156.7
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC---------CCCc
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT---------GRSP 72 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~---------t~~~ 72 (648)
+.+++++|++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.. +...
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 34578899999999999999999999888876 245666778877 8999999999999765 3332
Q ss_pred eeEEeccCCCCeEEEEEcc--CCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEeCCCCEEEEEEcCCeEEE
Q 006360 73 KVSWLKQHSAPTAGISFSS--DDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (648)
Q Consensus 73 ~v~~l~~H~~~V~slafsP--dg~~LaSgs~Dg~I~IWDl~tgk~v~~~--~h~~~I~slafsPdG~~Lasgs~DG~V~I 148 (648)
.......|...|.+++|+| ++++|++++.|+.|++||+++++++... .+...|.+++|+|+|.+|++|+.||.|+|
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 2233347778999999999 9999999999999999999999887655 35667999999999999999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcc
Q 006360 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (648)
Q Consensus 149 WDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~s 215 (648)
||+++.......+.. .|.+.|++++|+|++.+|+++ + |+.|++||++......
T Consensus 197 wd~~~~~~~~~~~~~-~h~~~v~~l~fs~~g~~l~s~------------~-~~~v~iwd~~~~~~~~ 249 (343)
T 3lrv_A 197 YNLSSPDQASSRFPV-DEEAKIKEVKFADNGYWMVVE------------C-DQTVVCFDLRKDVGTL 249 (343)
T ss_dssp EESSCTTSCCEECCC-CTTSCEEEEEECTTSSEEEEE------------E-SSBEEEEETTSSTTCB
T ss_pred EECCCCCCCccEEec-cCCCCEEEEEEeCCCCEEEEE------------e-CCeEEEEEcCCCCcce
Confidence 999988554345542 389999999999976665554 5 4599999998765443
No 73
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.90 E-value=1.3e-21 Score=200.24 Aligned_cols=192 Identities=16% Similarity=0.216 Sum_probs=158.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|++++|++|+.||.|+|||+.+++++..+.+ |...+.++.+ ++. ++++++.++.+++|+.......+..+.+|
T Consensus 74 ~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~-h~~~~~~~~~--~~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (318)
T 4ggc_A 74 AWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS-HSARVGSLSW--NSY-ILSSGSRSGHIHHHDVRVAEHHVATLSGH 149 (318)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEE--ETT-EEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EECCCCCEEEEEECCCcEEEeecCCceeEEEecC-ccceEEEeec--CCC-EEEEEecCCceEeeecCCCceeEEEEcCc
Confidence 4899999999999999999999999999999987 5556655444 455 89999999999999998877777888999
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceee-------------------------------------------
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSS------------------------------------------- 117 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~------------------------------------------- 117 (648)
...+.++.|.+++++|++++.|+.|++||+++++...
T Consensus 150 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~ 229 (318)
T 4ggc_A 150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 229 (318)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT
T ss_pred cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc
Confidence 9999999999999999999999999999997643110
Q ss_pred ------EeeCCCCeEEEEEeCCCCEEEEEE--cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCC
Q 006360 118 ------CITYEAPFSSLAFIDDDWILTAGT--SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCK 189 (648)
Q Consensus 118 ------~~~h~~~I~slafsPdG~~Lasgs--~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~ 189 (648)
...+...+..+.|++++..+++++ .|+.|+|||+++. +++..+. +|.+.|++|+|+|+|++|+++
T Consensus 230 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~-~~~~~l~--gH~~~V~~l~~spdg~~l~S~---- 302 (318)
T 4ggc_A 230 SGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELK--GHTSRVLSLTMSPDGATVASA---- 302 (318)
T ss_dssp TCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEEC--CCSSCEEEEEECTTSSCEEEE----
T ss_pred cccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC-cEEEEEc--CCCCCEEEEEEcCCCCEEEEE----
Confidence 001334567788888888887765 7899999999987 4555555 899999999999977666554
Q ss_pred CCeEEEEeeCCCeEEcCCCCCC
Q 006360 190 AETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 190 ~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
+.|++|++||+...
T Consensus 303 --------s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 303 --------AADETLRLWRCFEL 316 (318)
T ss_dssp --------ETTTEEEEECCSCC
T ss_pred --------ecCCeEEEEECCCC
Confidence 67999999998653
No 74
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.90 E-value=3.8e-22 Score=214.32 Aligned_cols=197 Identities=15% Similarity=0.270 Sum_probs=164.3
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCC
Q 006360 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSA 82 (648)
Q Consensus 3 SpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~ 82 (648)
+.+++.+++++.||.|++||+.+++....+...|...|.+++|+|+++ +|++|+.||.|+|||+.+.+. +..+..|..
T Consensus 100 ~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~ 177 (401)
T 4aez_A 100 DWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGS-FLSVGLGNGLVDIYDVESQTK-LRTMAGHQA 177 (401)
T ss_dssp EECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCE-EEEECCCSS
T ss_pred eecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCC-EEEEECCCCeEEEEECcCCeE-EEEecCCCC
Confidence 344566888999999999999999998888877888999999999998 899999999999999988774 677889999
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCC-CceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 006360 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGS-RRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (648)
Q Consensus 83 ~V~slafsPdg~~LaSgs~Dg~I~IWDl~t-gk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~ 160 (648)
.|.+++| ++++|++++.|+.|++||++. +..+..+ .|...|.+++|+|++.+|++|+.||.|++||+++. .+...
T Consensus 178 ~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~ 254 (401)
T 4aez_A 178 RVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS-IPKFT 254 (401)
T ss_dssp CEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS-SEEEE
T ss_pred ceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC-CccEE
Confidence 9999999 468999999999999999984 4444444 68999999999999999999999999999999986 33344
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcc
Q 006360 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (648)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~s 215 (648)
+. .|...|.+++|+|++..++..+ +++.|+.|++||+.......
T Consensus 255 ~~--~~~~~v~~~~~~p~~~~ll~~~---------~gs~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 255 KT--NHNAAVKAVAWCPWQSNLLATG---------GGTMDKQIHFWNAATGARVN 298 (401)
T ss_dssp EC--CCSSCCCEEEECTTSTTEEEEE---------CCTTTCEEEEEETTTCCEEE
T ss_pred ec--CCcceEEEEEECCCCCCEEEEe---------cCCCCCEEEEEECCCCCEEE
Confidence 43 7899999999999764433220 12369999999998655443
No 75
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.90 E-value=4.1e-22 Score=210.50 Aligned_cols=199 Identities=14% Similarity=0.187 Sum_probs=165.0
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEEe------------CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC
Q 006360 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELK------------DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT 67 (648)
Q Consensus 1 AFSp-dG~~Lasgs~DG~V~IwDl~sg~~i~~l~------------~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl 67 (648)
+|+| ++++|++|+.||.|++||+.+++....+. ..|...|.+++|+|++..+|++++.|+.|++||+
T Consensus 50 ~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 129 (408)
T 4a11_B 50 DIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDT 129 (408)
T ss_dssp EECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEET
T ss_pred EEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeC
Confidence 4899 99999999999999999998877655443 2377889999999955458999999999999999
Q ss_pred CCCCceeEEeccCCCCeEEEEEcc---CCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCC-EEEEEEc
Q 006360 68 TGRSPKVSWLKQHSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDW-ILTAGTS 142 (648)
Q Consensus 68 ~t~~~~v~~l~~H~~~V~slafsP---dg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~-~Lasgs~ 142 (648)
.+... +. ...+...+.+++|++ ++.+|++++.|+.|++||+++++.+..+ .|...|.+++|+|++. +|++++.
T Consensus 130 ~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~ 207 (408)
T 4a11_B 130 NTLQT-AD-VFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASA 207 (408)
T ss_dssp TTTEE-EE-EEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEET
T ss_pred CCCcc-ce-eccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcC
Confidence 98774 33 334778899999998 4459999999999999999999887776 4899999999999988 5889999
Q ss_pred CCeEEEEECCCCCCceEEEee-------------cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 143 NGRVVFYDIRGKPQPLTVLRA-------------CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 143 DG~V~IWDl~s~~~~~~~l~~-------------~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
||.|++||++....++..+.. ..|...|.+++|+|+++++++ ++.|+.|++||+.
T Consensus 208 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~------------~~~dg~i~vwd~~ 275 (408)
T 4a11_B 208 DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLT------------VGTDNRMRLWNSS 275 (408)
T ss_dssp TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEE------------EETTSCEEEEETT
T ss_pred CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEE------------ecCCCeEEEEECC
Confidence 999999999987555554421 368899999999997666554 4669999999998
Q ss_pred CCCC
Q 006360 210 PSVT 213 (648)
Q Consensus 210 ~~~~ 213 (648)
....
T Consensus 276 ~~~~ 279 (408)
T 4a11_B 276 NGEN 279 (408)
T ss_dssp TCCB
T ss_pred CCcc
Confidence 6554
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.90 E-value=6.4e-22 Score=209.77 Aligned_cols=192 Identities=14% Similarity=0.237 Sum_probs=164.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-------
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK------- 73 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~------- 73 (648)
+|+|++++|++++.||.|++|| .+++.+..+.. |...|.+++|+|+++ +|++++.|+.|++||+.++...
T Consensus 115 ~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 191 (425)
T 1r5m_A 115 AWSHDGNSIVTGVENGELRLWN-KTGALLNVLNF-HRAPIVSVKWNKDGT-HIISMDVENVTILWNVISGTVMQHFELKE 191 (425)
T ss_dssp EECTTSSEEEEEETTSCEEEEE-TTSCEEEEECC-CCSCEEEEEECTTSS-EEEEEETTCCEEEEETTTTEEEEEECCC-
T ss_pred EEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccC-CCccEEEEEECCCCC-EEEEEecCCeEEEEECCCCcEEEEeeccc
Confidence 4899999999999999999999 57888888875 778899999999998 8999999999999999654321
Q ss_pred ------------------------------------------------eEEeccCCCCeEEEEEccCCCEEEEEeCCCeE
Q 006360 74 ------------------------------------------------VSWLKQHSAPTAGISFSSDDKIIASVGLDKKL 105 (648)
Q Consensus 74 ------------------------------------------------v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I 105 (648)
+..+..|...|.+++|+|++++|++++.|+.|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 271 (425)
T 1r5m_A 192 TGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTL 271 (425)
T ss_dssp --------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred cCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 12345688899999999999999999999999
Q ss_pred EEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEE
Q 006360 106 YTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFID 184 (648)
Q Consensus 106 ~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las 184 (648)
++||+++++.+..+ .|...|.+++|+|++ +|++++.||.|++||+++. ..+..+. .|...|.+++|+|+++++++
T Consensus 272 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~-~~~~~~~--~~~~~i~~~~~s~~~~~l~~ 347 (425)
T 1r5m_A 272 RIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN-TLLALSI--VDGVPIFAGRISQDGQKYAV 347 (425)
T ss_dssp EEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT-EEEEEEE--CTTCCEEEEEECTTSSEEEE
T ss_pred EEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC-cEeEecc--cCCccEEEEEEcCCCCEEEE
Confidence 99999998887777 488999999999999 9999999999999999887 3444444 78899999999997666554
Q ss_pred eccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 185 ETTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 185 ~~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
++.|+.|++||+...
T Consensus 348 ------------~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 348 ------------AFMDGQVNVYDLKKL 362 (425)
T ss_dssp ------------EETTSCEEEEECHHH
T ss_pred ------------EECCCeEEEEECCCC
Confidence 466999999999643
No 77
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.90 E-value=3.3e-22 Score=217.51 Aligned_cols=198 Identities=16% Similarity=0.232 Sum_probs=160.9
Q ss_pred CccCCCC-EEEEEECCCcEEEEECCCCce-------eEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC-
Q 006360 1 MYNCKDE-HLASISLSGDLILHNLASGAK-------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS- 71 (648)
Q Consensus 1 AFSpdG~-~Lasgs~DG~V~IwDl~sg~~-------i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~- 71 (648)
+|+|++. +|++|+.||.|++||+..+.. ...+. .|...|.+++|+|++..+|++++.|+.|++||++...
T Consensus 188 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 188 SWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFT-GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT 266 (430)
T ss_dssp EECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEEC-CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred EeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeec-CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence 4889988 999999999999999987432 33444 4778899999999666699999999999999998762
Q ss_pred -ceeEEeccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEeCCC-CceeeEe-eCCCCeEEEEEeCCC-CEEEEEEcCCeE
Q 006360 72 -PKVSWLKQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGS-RRPSSCI-TYEAPFSSLAFIDDD-WILTAGTSNGRV 146 (648)
Q Consensus 72 -~~v~~l~~H~~~V~slafsPdg~-~LaSgs~Dg~I~IWDl~t-gk~v~~~-~h~~~I~slafsPdG-~~Lasgs~DG~V 146 (648)
..+..+..|...|++++|+|++. +|++|+.||.|++||++. .+++..+ .|...|.+++|+|++ .+|++++.||.|
T Consensus 267 ~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i 346 (430)
T 2xyi_A 267 SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 346 (430)
T ss_dssp SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCC
T ss_pred CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcE
Confidence 23566779999999999999776 789999999999999998 4555555 589999999999998 479999999999
Q ss_pred EEEECCCCCC-----------ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 147 VFYDIRGKPQ-----------PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 147 ~IWDl~s~~~-----------~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
+|||+..... +.......+|...|++++|+|++++ ++++++.|+.|++|++..
T Consensus 347 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~-----------~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 347 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW-----------IICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTT-----------EEEEEETTSEEEEEEECH
T ss_pred EEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCC-----------EEEEEECCCCEEEeEccc
Confidence 9999987321 1233333478999999999997652 445557799999999863
No 78
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.90 E-value=3.2e-22 Score=212.14 Aligned_cols=192 Identities=19% Similarity=0.261 Sum_probs=157.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeC----------------------------------------------
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD---------------------------------------------- 34 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~---------------------------------------------- 34 (648)
+|+|++++|++++.||.|++||+.+++.+..+..
T Consensus 156 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~ 235 (425)
T 1r5m_A 156 KWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQIT 235 (425)
T ss_dssp EECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETT
T ss_pred EECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcC
Confidence 3677777777777778888887766654433221
Q ss_pred ---------CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeE
Q 006360 35 ---------PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKL 105 (648)
Q Consensus 35 ---------~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I 105 (648)
.|...|.+++|+++++ +|++++.|+.|++||+..... +..+..|...|.+++|+|++ +|++++.|+.|
T Consensus 236 ~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i 312 (425)
T 1r5m_A 236 EKTPTGKLIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGNGNS-QNCFYGHSQSIVSASWVGDD-KVISCSMDGSV 312 (425)
T ss_dssp CSSCSEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSSBSC-SEEECCCSSCEEEEEEETTT-EEEEEETTSEE
T ss_pred CCceeeeeccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCcc-ceEecCCCccEEEEEECCCC-EEEEEeCCCcE
Confidence 2566789999999998 899999999999999988765 56778899999999999998 99999999999
Q ss_pred EEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCC-------------------ceEEEeecC
Q 006360 106 YTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ-------------------PLTVLRACS 165 (648)
Q Consensus 106 ~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~-------------------~~~~l~~~~ 165 (648)
++||+++++.+..+ .|...|.+++|+|++++|++++.||.|+|||+++... ++..+. .
T Consensus 313 ~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 390 (425)
T 1r5m_A 313 RLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQ--S 390 (425)
T ss_dssp EEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEEC--C
T ss_pred EEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhc--C
Confidence 99999999888776 4788999999999999999999999999999986530 334444 6
Q ss_pred CCC--CeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 166 SSE--AVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 166 h~~--~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
|.. .|++++|+|++++|++ ++.|+.|++||+.
T Consensus 391 ~~~~~~v~~~~~s~~~~~l~~------------~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 391 SQDNDYIFDLSWNCAGNKISV------------AYSLQEGSVVAIP 424 (425)
T ss_dssp TTCCCCEEEEEECTTSSEEEE------------EESSSCCEEEECC
T ss_pred cccCCceEEEEccCCCceEEE------------EecCceEEEEeec
Confidence 755 9999999997665544 4669999999974
No 79
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.8e-22 Score=210.79 Aligned_cols=191 Identities=14% Similarity=0.103 Sum_probs=148.8
Q ss_pred ccCCCCEEEEEECCCcEEEEECC---------CCceeEEEeCCCCCcEEEEEEcc--CCCeEEEEEeCCCeEEEEECCCC
Q 006360 2 YNCKDEHLASISLSGDLILHNLA---------SGAKAAELKDPNEQVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGR 70 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~---------sg~~i~~l~~~~~~~V~~Vafsp--dg~~lLaSgs~Dg~V~IWDl~t~ 70 (648)
|+|+ +++++.|+.|++|+.. +++.+..+...|...|.+++|+| +++ +|++++.|+.|++||+.++
T Consensus 84 ~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~ 159 (343)
T 3lrv_A 84 EHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDD 159 (343)
T ss_dssp CCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSS
T ss_pred eCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCC
Confidence 5666 8999999999999654 55556666655677899999999 887 8999999999999999988
Q ss_pred CceeEEe-ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee-eEe-e-CCCCeEEEEEeCCCCEEEEEEcCCeE
Q 006360 71 SPKVSWL-KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS-SCI-T-YEAPFSSLAFIDDDWILTAGTSNGRV 146 (648)
Q Consensus 71 ~~~v~~l-~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v-~~~-~-h~~~I~slafsPdG~~Lasgs~DG~V 146 (648)
.. +... ..|...|.+++|+|++.+|++|+.|+.|++||+++++.+ ..+ . |...|.+++|+|+|.+|++++ |+.|
T Consensus 160 ~~-~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v 237 (343)
T 3lrv_A 160 SQ-YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTV 237 (343)
T ss_dssp CE-EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBE
T ss_pred cE-EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeE
Confidence 75 3333 456668999999999999999999999999999999876 444 4 899999999999999999999 5599
Q ss_pred EEEECCCCCCceEEEee-cCCCCCe--eEEEEccCCCeEEEeccCCCCeEEEEeeC-CCeEEcCCCCCC
Q 006360 147 VFYDIRGKPQPLTVLRA-CSSSEAV--SSLCWQRAKPVFIDETTCKAETALLGGAV-GDSILMPDPLPS 211 (648)
Q Consensus 147 ~IWDl~s~~~~~~~l~~-~~h~~~V--tsLafspdg~~Las~~~~~~~~~lvs~s~-D~~IkvWDlr~~ 211 (648)
+|||+++.... ..+.. ..|...+ .+++|+|+|++|+++ +. |+.|++|++...
T Consensus 238 ~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~------------s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 238 VCFDLRKDVGT-LAYPTYTIPEFKTGTVTYDIDDSGKNMIAY------------SNESNSLTIYKFDKK 293 (343)
T ss_dssp EEEETTSSTTC-BSSCCCBC-----CCEEEEECTTSSEEEEE------------ETTTTEEEEEEECTT
T ss_pred EEEEcCCCCcc-eeecccccccccccceEEEECCCCCEEEEe------------cCCCCcEEEEEEccc
Confidence 99999987432 22221 1233334 469999977776554 44 888999987543
No 80
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.90 E-value=6.4e-22 Score=208.96 Aligned_cols=200 Identities=15% Similarity=0.124 Sum_probs=161.4
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCC--eEEEEEeCCCeEEEEECCCCCceeEEe
Q 006360 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSR--HLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (648)
Q Consensus 1 AFSp-dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~--~lLaSgs~Dg~V~IWDl~t~~~~v~~l 77 (648)
+|+| ++++|++++.||.|++||+.+++.+..+. +...+.+++|++.+. .++++++.|+.|++||+.++.. +..+
T Consensus 106 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-~~~~ 182 (408)
T 4a11_B 106 QWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC-SHIL 182 (408)
T ss_dssp EECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC-CEEE
T ss_pred EEccCCCcEEEEEeCCCeEEEeeCCCCccceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce-eeee
Confidence 4788 67899999999999999999999888877 566788899988532 2899999999999999988775 5778
Q ss_pred ccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEeCCCCc-eeeE----------------eeCCCCeEEEEEeCCCCEEEE
Q 006360 78 KQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGSRR-PSSC----------------ITYEAPFSSLAFIDDDWILTA 139 (648)
Q Consensus 78 ~~H~~~V~slafsPdg~-~LaSgs~Dg~I~IWDl~tgk-~v~~----------------~~h~~~I~slafsPdG~~Las 139 (648)
..|...|.+++|+|++. +|++++.|+.|++||++.+. ++.. ..|...|.+++|+|++++|++
T Consensus 183 ~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 262 (408)
T 4a11_B 183 QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLT 262 (408)
T ss_dssp CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEE
T ss_pred cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEE
Confidence 89999999999999888 68999999999999998765 2222 247788999999999999999
Q ss_pred EEcCCeEEEEECCCCCCc--------------------------------------------eEEEeecCCCCCeeEEEE
Q 006360 140 GTSNGRVVFYDIRGKPQP--------------------------------------------LTVLRACSSSEAVSSLCW 175 (648)
Q Consensus 140 gs~DG~V~IWDl~s~~~~--------------------------------------------~~~l~~~~h~~~VtsLaf 175 (648)
++.||.|++||+++.... .......+|...|++++|
T Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 342 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVF 342 (408)
T ss_dssp EETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred ecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEE
Confidence 999999999999864321 011122368999999999
Q ss_pred ccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcc
Q 006360 176 QRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (648)
Q Consensus 176 spdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~s 215 (648)
+|++++|++ ++.|+.|++||+.......
T Consensus 343 s~~~~~l~s------------~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 343 QSNFQELYS------------GSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp ETTTTEEEE------------EETTSCEEEEEECC-----
T ss_pred cCCCCEEEE------------ECCCCeEEEEeCCCCCccC
Confidence 997665544 4669999999998766543
No 81
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.90 E-value=8.1e-23 Score=220.67 Aligned_cols=192 Identities=10% Similarity=0.145 Sum_probs=159.9
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCC-CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-c
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDP-NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-Q 79 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~-~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~-~ 79 (648)
+++++++|++++.||.|++||+.+++.+..+..+ |...|.+++|+|+++ +|++|+.||.|+|||++.+.. +..+. .
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~~~ 255 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFNVL-IRSWSFG 255 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEE-EEEEBCT
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCccE-EEEEecC
Confidence 4678999999999999999999999999999875 677899999999988 899999999999999998765 44444 7
Q ss_pred CCCCeEEEEEcc----CCCEEEEEeCCCeEEEEeCCCCceeeEee---------------------------CCCCeEEE
Q 006360 80 HSAPTAGISFSS----DDKIIASVGLDKKLYTYDPGSRRPSSCIT---------------------------YEAPFSSL 128 (648)
Q Consensus 80 H~~~V~slafsP----dg~~LaSgs~Dg~I~IWDl~tgk~v~~~~---------------------------h~~~I~sl 128 (648)
|...|.+++|+| ++.+|++++.|+.|++||+++++++..+. |...|.++
T Consensus 256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l 335 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI 335 (437)
T ss_dssp TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE
T ss_pred CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE
Confidence 888999997765 67799999999999999999988776553 45568899
Q ss_pred EEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeec-----------------------------------CCCCCeeEE
Q 006360 129 AFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRAC-----------------------------------SSSEAVSSL 173 (648)
Q Consensus 129 afsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~-----------------------------------~h~~~VtsL 173 (648)
+|+ ++.+|++|+.||.|++||+.+... ...+..+ .|...|+++
T Consensus 336 ~~~-~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i 413 (437)
T 3gre_A 336 SVS-NDKILLTDEATSSIVMFSLNELSS-SKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSI 413 (437)
T ss_dssp EEE-TTEEEEEEGGGTEEEEEETTCGGG-CEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEE
T ss_pred EEC-CceEEEecCCCCeEEEEECCCccc-ceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeE
Confidence 999 789999999999999999998743 3434321 288889999
Q ss_pred EEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCC
Q 006360 174 CWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (648)
Q Consensus 174 afspdg~~Las~~~~~~~~~lvs~s~D~~IkvWD 207 (648)
+|.++ .+..++++++.||.|++|+
T Consensus 414 ~~~~~----------~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 414 STCEV----------DETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEES----------SSSEEEEEEETTSCEEEEC
T ss_pred eeecc----------CCceEEEEEcCCceEEEeC
Confidence 99873 2366778888999999995
No 82
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.90 E-value=3.8e-23 Score=225.04 Aligned_cols=208 Identities=15% Similarity=0.179 Sum_probs=164.2
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEEeCCC--CCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006360 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELKDPN--EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (648)
Q Consensus 1 AFSp-dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~--~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l 77 (648)
+|+| ++++|++++.||+|+|||++.+. ...+..++ ...+.+++|++++. +|++|+.||.|++||+++.. +..+
T Consensus 171 ~f~p~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~~~--~~~~ 246 (435)
T 4e54_B 171 KFNPLNTNQFYASSMEGTTRLQDFKGNI-LRVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDGKE--LWNL 246 (435)
T ss_dssp EECSSCTTEEEEECSSSCEEEEETTSCE-EEEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSSCB--CCCS
T ss_pred EEeCCCCCEEEEEeCCCEEEEeeccCCc-eeEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCcce--eEEE
Confidence 4887 68899999999999999996544 34444333 34567899999998 89999999999999998754 5678
Q ss_pred ccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEeCCCCceeeE----eeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECC
Q 006360 78 KQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGSRRPSSC----ITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIR 152 (648)
Q Consensus 78 ~~H~~~V~slafsPdg~-~LaSgs~Dg~I~IWDl~tgk~v~~----~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~ 152 (648)
.+|...|++++|+|++. +|++++.|+.|++||+++.+.... ..|...|.+++|+|+|.+|++++.||.|+|||++
T Consensus 247 ~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 247 RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred ecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECC
Confidence 89999999999999765 788999999999999988764332 3688999999999999999999999999999999
Q ss_pred CCCCceEEEeecCC----CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 153 GKPQPLTVLRACSS----SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 153 s~~~~~~~l~~~~h----~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
+...+.. +..+.+ ...+..+.|++++.+++++.......+++++..++.|++||......
T Consensus 327 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~ 390 (435)
T 4e54_B 327 QWDCPLG-LIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM 390 (435)
T ss_dssp SSSSEEE-ECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE
T ss_pred CCccceE-EecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE
Confidence 8754333 321111 12345678999999988876555666666666678999999865443
No 83
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.90 E-value=1.4e-22 Score=214.63 Aligned_cols=198 Identities=16% Similarity=0.174 Sum_probs=163.9
Q ss_pred CccCC----C---CEEEEEECCCcEEEEECCCCce-----eEEEeCCC----CCcEEEEEEc----cCCCeE-EEEEeCC
Q 006360 1 MYNCK----D---EHLASISLSGDLILHNLASGAK-----AAELKDPN----EQVLRVLDYS----RNSRHL-LVTAGDD 59 (648)
Q Consensus 1 AFSpd----G---~~Lasgs~DG~V~IwDl~sg~~-----i~~l~~~~----~~~V~~Vafs----pdg~~l-LaSgs~D 59 (648)
+|+++ + ++|++++.||.|++||+.+++. +..+..+. ...|.+++|+ ++++ + |++++.|
T Consensus 69 ~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~l~~~~~d 147 (397)
T 1sq9_A 69 DVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS-HRLVATDVK 147 (397)
T ss_dssp EEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----C-EEEEEEETT
T ss_pred EEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCc-eEEEEEeCC
Confidence 36777 8 9999999999999999988886 77777643 5789999999 9998 6 9999999
Q ss_pred CeEEEEECCC------CCceeE-----Ee-------ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee-
Q 006360 60 GTLHLWDTTG------RSPKVS-----WL-------KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT- 120 (648)
Q Consensus 60 g~V~IWDl~t------~~~~v~-----~l-------~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~- 120 (648)
+.|++||+.. ... +. .+ ..|...|.+++|+|++ +|++++.|+.|++||+++++.+..+.
T Consensus 148 g~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~ 225 (397)
T 1sq9_A 148 GTTYIWKFHPFADESNSLT-LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFES 225 (397)
T ss_dssp SCEEEEEEESSSSHHHHTT-TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEeCCccccccccce-eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEec
Confidence 9999999987 443 22 44 4588999999999999 99999999999999999998887775
Q ss_pred ---C---CCCeEEEEEeCCCCEEEEEEcC---CeEEEEECCCCCCceEEEeecC-------------CCCCeeEEEEccC
Q 006360 121 ---Y---EAPFSSLAFIDDDWILTAGTSN---GRVVFYDIRGKPQPLTVLRACS-------------SSEAVSSLCWQRA 178 (648)
Q Consensus 121 ---h---~~~I~slafsPdG~~Lasgs~D---G~V~IWDl~s~~~~~~~l~~~~-------------h~~~VtsLafspd 178 (648)
| ...|.+++|+|++.+|++++.| |.|++||+++. +++..+. . |...|.+++|+|+
T Consensus 226 ~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~ 302 (397)
T 1sq9_A 226 QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG-ERIGSLS--VPTHSSQASLGEFAHSSWVMSLSFNDS 302 (397)
T ss_dssp CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC-CEEEEEC--BC--------CCBSBSSCEEEEEECSS
T ss_pred cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC-cccceec--cCcccccccccccccCCcEEEEEECCC
Confidence 5 8999999999999999999999 99999999987 4444444 4 8999999999997
Q ss_pred CCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCccc
Q 006360 179 KPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (648)
Q Consensus 179 g~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss 216 (648)
+++|++ ++.|+.|++||++.......
T Consensus 303 ~~~l~~------------~~~dg~i~iwd~~~~~~~~~ 328 (397)
T 1sq9_A 303 GETLCS------------AGWDGKLRFWDVKTKERITT 328 (397)
T ss_dssp SSEEEE------------EETTSEEEEEETTTTEEEEE
T ss_pred CCEEEE------------EeCCCeEEEEEcCCCceeEE
Confidence 665544 46699999999986654433
No 84
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.89 E-value=1.3e-21 Score=202.06 Aligned_cols=197 Identities=15% Similarity=0.172 Sum_probs=163.4
Q ss_pred CccCC-CCEEEEEECCCcEEEEECCCCc-----eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 006360 1 MYNCK-DEHLASISLSGDLILHNLASGA-----KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (648)
Q Consensus 1 AFSpd-G~~Lasgs~DG~V~IwDl~sg~-----~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v 74 (648)
+|+|+ +++|++|+.||+|+|||+.+.+ +...+.+ |...|.+++|+|+++ +|++++.|+.|++|+...... .
T Consensus 45 ~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-h~~~V~~~~~s~dg~-~l~s~~~d~~i~~~~~~~~~~-~ 121 (340)
T 4aow_A 45 ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG-HSHFVSDVVISSDGQ-FALSGSWDGTLRLWDLTTGTT-T 121 (340)
T ss_dssp EECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-E
T ss_pred EEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeC-CCCCEEEEEECCCCC-EEEEEcccccceEEeecccce-e
Confidence 58997 5899999999999999987654 3455665 778899999999998 899999999999999988764 5
Q ss_pred EEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEeCC--CCEEEEEEcCCeEEEEE
Q 006360 75 SWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDD--DWILTAGTSNGRVVFYD 150 (648)
Q Consensus 75 ~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~--~h~~~I~slafsPd--G~~Lasgs~DG~V~IWD 150 (648)
.....+...+..+.+++++.+|++++.|+.+++||+......... .|...+.+++|+++ ..++++++.|+.|++||
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d 201 (340)
T 4aow_A 122 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201 (340)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEE
Confidence 566778888999999999999999999999999999876544332 57889999999986 46788999999999999
Q ss_pred CCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcc
Q 006360 151 IRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (648)
Q Consensus 151 l~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~s 215 (648)
+++. .....+. +|.+.|++++|+|++++|+ +++.|+.|++||++......
T Consensus 202 ~~~~-~~~~~~~--~h~~~v~~~~~s~~~~~l~------------s~s~Dg~i~iwd~~~~~~~~ 251 (340)
T 4aow_A 202 LANC-KLKTNHI--GHTGYLNTVTVSPDGSLCA------------SGGKDGQAMLWDLNEGKHLY 251 (340)
T ss_dssp TTTT-EEEEEEC--CCSSCEEEEEECTTSSEEE------------EEETTCEEEEEETTTTEEEE
T ss_pred CCCC-ceeeEec--CCCCcEEEEEECCCCCEEE------------EEeCCCeEEEEEeccCceee
Confidence 9987 3334444 7999999999999766554 44679999999998665443
No 85
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.89 E-value=1.9e-22 Score=217.18 Aligned_cols=196 Identities=11% Similarity=0.166 Sum_probs=155.1
Q ss_pred CccCCC--CEEEEEECCCcEEEEECCCCcee---------------------------------------EEEeCCCCCc
Q 006360 1 MYNCKD--EHLASISLSGDLILHNLASGAKA---------------------------------------AELKDPNEQV 39 (648)
Q Consensus 1 AFSpdG--~~Lasgs~DG~V~IwDl~sg~~i---------------------------------------~~l~~~~~~~ 39 (648)
+|+|++ .+|++++.||.|++||+.++... ..+...|...
T Consensus 100 ~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 100 RWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp EECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred EEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 488988 79999999999999998764331 1333457888
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE-------EeccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEeCC
Q 006360 40 LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS-------WLKQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPG 111 (648)
Q Consensus 40 V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~-------~l~~H~~~V~slafsPdg-~~LaSgs~Dg~I~IWDl~ 111 (648)
|.+++|+|+++ +|++| .|+.|+|||+......+. .+.+|...|++++|+|++ .+|++++.|+.|++||++
T Consensus 180 v~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 180 INSISINSDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp CCEEEECTTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred eEEEEEcCCCC-EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 99999999998 78888 899999999984432233 256899999999999998 999999999999999999
Q ss_pred CCce----eeEee-CCC------------CeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCC-----
Q 006360 112 SRRP----SSCIT-YEA------------PFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEA----- 169 (648)
Q Consensus 112 tgk~----v~~~~-h~~------------~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~----- 169 (648)
+++. +..+. |.. .|.+++|+|+|.+|++++. +.|+|||++....++..+. .|...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~--~~~~~~~~l~ 334 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ--VHEYLRSKLC 334 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE--SCGGGTTTHH
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee--cccccccccc
Confidence 9886 55553 443 8999999999999999999 9999999997445666666 44321
Q ss_pred ----------eeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 170 ----------VSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 170 ----------VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
+..++|+|++++|++ ++.|+.|++||+.....
T Consensus 335 ~~~~~~~i~~~~~~~~s~~~~~l~s------------~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 335 SLYENDCIFDKFECCWNGSDSVVMT------------GSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp HHHHTSGGGCCCCEEECTTSSEEEE------------ECSTTEEEEEETTTCCE
T ss_pred ccccccccccceEEEECCCCCEEEE------------eccCCEEEEEEcCCCcc
Confidence 334999997666544 46699999999976443
No 86
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=5.1e-22 Score=216.78 Aligned_cols=199 Identities=16% Similarity=0.157 Sum_probs=161.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc---eeEEEeCC------------------------------------------
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGA---KAAELKDP------------------------------------------ 35 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~---~i~~l~~~------------------------------------------ 35 (648)
+|++||++|+++ .++.|++||+.+|+ .+..+..+
T Consensus 11 ~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (450)
T 2vdu_B 11 LTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRTAA 89 (450)
T ss_dssp EECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------------
T ss_pred EecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccccccCc
Confidence 489999966655 57899999999998 66655532
Q ss_pred -----------CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC--CCCceeEEec--cCCCCeEEEEEccCCCEEEEEe
Q 006360 36 -----------NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT--GRSPKVSWLK--QHSAPTAGISFSSDDKIIASVG 100 (648)
Q Consensus 36 -----------~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~--t~~~~v~~l~--~H~~~V~slafsPdg~~LaSgs 100 (648)
+...|.+++|+|+++.++++++.|+.|+|||+. ++.. +..+. .|...|++++|+|++++|++++
T Consensus 90 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 168 (450)
T 2vdu_B 90 KVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV-LKLRKRFCFSKRPNAISIAEDDTTVIIAD 168 (450)
T ss_dssp ----------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC-EEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred cccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce-eeeeecccCCCCceEEEEcCCCCEEEEEe
Confidence 222699999999999556899999999999998 6654 45554 6778999999999999999999
Q ss_pred CCCeEEEEeCCCCceee----E-eeCCCCeEEEEEeCC---CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeE
Q 006360 101 LDKKLYTYDPGSRRPSS----C-ITYEAPFSSLAFIDD---DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSS 172 (648)
Q Consensus 101 ~Dg~I~IWDl~tgk~v~----~-~~h~~~I~slafsPd---G~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~Vts 172 (648)
.|+.|++||+.+++... . ..|...|.+++|+|+ +.+|++++.|+.|+|||+++.......+ .+|...|.+
T Consensus 169 ~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~--~~h~~~v~~ 246 (450)
T 2vdu_B 169 KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL--FGHKHFVSS 246 (450)
T ss_dssp TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC--CCCSSCEEE
T ss_pred CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee--cCCCCceEE
Confidence 99999999998877543 3 368999999999999 9999999999999999999874322223 379999999
Q ss_pred EEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCccc
Q 006360 173 LCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (648)
Q Consensus 173 Lafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss 216 (648)
++|+ ++++|+++ +.|+.|++||+........
T Consensus 247 ~~~s-d~~~l~s~------------~~d~~v~vwd~~~~~~~~~ 277 (450)
T 2vdu_B 247 ICCG-KDYLLLSA------------GGDDKIFAWDWKTGKNLST 277 (450)
T ss_dssp EEEC-STTEEEEE------------ESSSEEEEEETTTCCEEEE
T ss_pred EEEC-CCCEEEEE------------eCCCeEEEEECCCCcEeee
Confidence 9999 87777655 5699999999987654433
No 87
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.89 E-value=2e-22 Score=216.01 Aligned_cols=194 Identities=15% Similarity=0.210 Sum_probs=164.9
Q ss_pred CccCCC-CEEEEEECCCcEEEEECCCCceeEEEe-CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe-
Q 006360 1 MYNCKD-EHLASISLSGDLILHNLASGAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL- 77 (648)
Q Consensus 1 AFSpdG-~~Lasgs~DG~V~IwDl~sg~~i~~l~-~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l- 77 (648)
+|+|++ ++|++++.||.|+|||+.+++.+..+. ..|...|.+++|+|+++ +|++++.|+.|+|||++++.. +..+
T Consensus 138 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~-~~~~~ 215 (402)
T 2aq5_A 138 AWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGA-LICTSCRDKRVRVIEPRKGTV-VAEKD 215 (402)
T ss_dssp EECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSS-CEEEEETTSEEEEEETTTTEE-EEEEE
T ss_pred EECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCC-EEEEEecCCcEEEEeCCCCce-eeeec
Confidence 489998 699999999999999999999998883 34788899999999998 799999999999999998875 4555
Q ss_pred ccCCCC-eEEEEEccCCCEEEEE---eCCCeEEEEeCCCCce-e--eEeeCCCCeEEEEEeCCCCEEEE-EEcCCeEEEE
Q 006360 78 KQHSAP-TAGISFSSDDKIIASV---GLDKKLYTYDPGSRRP-S--SCITYEAPFSSLAFIDDDWILTA-GTSNGRVVFY 149 (648)
Q Consensus 78 ~~H~~~-V~slafsPdg~~LaSg---s~Dg~I~IWDl~tgk~-v--~~~~h~~~I~slafsPdG~~Las-gs~DG~V~IW 149 (648)
..|... +.+++|+|++.+|+++ +.|+.|++||+++++. + ..+.+...+.+++|+|++.+|++ |+.||.|++|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~ 295 (402)
T 2aq5_A 216 RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYF 295 (402)
T ss_dssp CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEE
T ss_pred cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEE
Confidence 788765 8999999999999999 7999999999998764 3 33357888999999999999975 5579999999
Q ss_pred ECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 150 Dl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
|+.+....+..+..+.|...|.+++|+|++.+++++ ++.+++|++..
T Consensus 296 d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~--------------~~~~~~~~l~~ 342 (402)
T 2aq5_A 296 EITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNK--------------CEIARFYKLHE 342 (402)
T ss_dssp EECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGG--------------TEEEEEEEEET
T ss_pred EecCCCcceEeecccccCCcccceEEecccccceec--------------ceeEEEEEcCC
Confidence 999886546677766788999999999988877654 66888888764
No 88
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.89 E-value=8.6e-22 Score=240.49 Aligned_cols=151 Identities=18% Similarity=0.318 Sum_probs=140.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|+|++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++++.|+.|+|||+.+++. +..+.+|
T Consensus 622 ~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~-h~~~v~~~~~s~~~~-~l~s~~~d~~v~vwd~~~~~~-~~~~~~~ 698 (1249)
T 3sfz_A 622 CFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA-HEDEVLCCAFSSDDS-YIATCSADKKVKIWDSATGKL-VHTYDEH 698 (1249)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCE-EEEEECC
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCCEEEEecc-CCCCEEEEEEecCCC-EEEEEeCCCeEEEEECCCCce-EEEEcCC
Confidence 5899999999999999999999999999999986 778899999999998 899999999999999998875 6788899
Q ss_pred CCCeEEEEEcc--CCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCC
Q 006360 81 SAPTAGISFSS--DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (648)
Q Consensus 81 ~~~V~slafsP--dg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~ 154 (648)
...|.+++|+| ++.++++++.|+.|++||+.+++++..+ .|...|.+++|+|++.+|++++.||.|++||+++.
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence 99999999999 6678999999999999999999988766 68999999999999999999999999999999765
No 89
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.89 E-value=3.1e-22 Score=207.32 Aligned_cols=192 Identities=11% Similarity=0.073 Sum_probs=162.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc---eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC-CCCCceeEE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT-TGRSPKVSW 76 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~---~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl-~t~~~~v~~ 76 (648)
+|+|++++|++++.||.|+|||+.+++ ....+. .|...|.+++|+++++.+|++++.||.|++||+ .+.. ...
T Consensus 18 ~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--~~~ 94 (342)
T 1yfq_A 18 KIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS--FQA 94 (342)
T ss_dssp EEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS--EEE
T ss_pred EEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc--eEe
Confidence 489999999999999999999998877 233344 377889999999997536889999999999999 8776 467
Q ss_pred ecc--CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC---------CceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCe
Q 006360 77 LKQ--HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS---------RRPSSCITYEAPFSSLAFIDDDWILTAGTSNGR 145 (648)
Q Consensus 77 l~~--H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~t---------gk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~ 145 (648)
+.. |...|.+++|+| +.+|++++.|+.|++||+++ ++++..+.+...|.+++|++++ |++++.|+.
T Consensus 95 ~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~ 171 (342)
T 1yfq_A 95 LTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQ 171 (342)
T ss_dssp CBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTE
T ss_pred ccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCe
Confidence 788 999999999999 99999999999999999988 7777777799999999999987 999999999
Q ss_pred EEEEECCC-CCCceEEEeecCCCCCeeEEEEcc-CCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 146 VVFYDIRG-KPQPLTVLRACSSSEAVSSLCWQR-AKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 146 V~IWDl~s-~~~~~~~l~~~~h~~~VtsLafsp-dg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
|++||++. ....... ....|...|.+++|+| ++++++++ +.|+.|++||+...
T Consensus 172 i~i~d~~~~~~~~~~~-~~~~~~~~i~~i~~~~~~~~~l~~~------------~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 172 VQWFRLPLCEDDNGTI-EESGLKYQIRDVALLPKEQEGYACS------------SIDGRVAVEFFDDQ 226 (342)
T ss_dssp EEEEESSCCTTCCCEE-EECSCSSCEEEEEECSGGGCEEEEE------------ETTSEEEEEECCTT
T ss_pred EEEEECCcccccccee-eecCCCCceeEEEECCCCCCEEEEE------------ecCCcEEEEEEcCC
Confidence 99999998 5433332 2336888999999999 87665554 56999999998765
No 90
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=4e-22 Score=233.17 Aligned_cols=201 Identities=11% Similarity=0.174 Sum_probs=166.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECC--CCceeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ceeE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLA--SGAKAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKVS 75 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~--sg~~i~~l~~~~~~~V~~Vafspd--g~~lLaSgs~Dg~V~IWDl~t~~-~~v~ 75 (648)
+|+|+|++|++|+.||.|+|||+. +++.+..+.+ |...|.+++|+++ ++ +|++|+.||.|++||+.++. ..+.
T Consensus 16 ~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~~-~l~s~s~Dg~I~vwd~~~~~~~~~~ 93 (753)
T 3jro_A 16 VLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWKEENGRWSQIA 93 (753)
T ss_dssp CCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECC-CSSCEEEEEECCTTSCS-EEEEEETTSCEEEEEEETTEEEEEE
T ss_pred EECCCCCeEEEEECCCcEEEEecCCCCCccceeccC-CcCceEEEEecCCCCCC-EEEEEeCCCeEEEEECCCCcccccc
Confidence 689999999999999999999997 4456667775 7788999999987 66 89999999999999998764 2356
Q ss_pred EeccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEeCCCCce---eeEeeCCCCeEEEEEeC-------------CCCEE
Q 006360 76 WLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRP---SSCITYEAPFSSLAFID-------------DDWIL 137 (648)
Q Consensus 76 ~l~~H~~~V~slafsPd--g~~LaSgs~Dg~I~IWDl~tgk~---v~~~~h~~~I~slafsP-------------dG~~L 137 (648)
.+..|...|++++|+|+ +.+|++++.||.|++||++.+.. .....|...|.+++|+| ++.+|
T Consensus 94 ~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l 173 (753)
T 3jro_A 94 VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (753)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCE
T ss_pred cccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEE
Confidence 77889999999999998 99999999999999999998732 23346889999999999 58999
Q ss_pred EEEEcCCeEEEEECCCCCCceEE-EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCC
Q 006360 138 TAGTSNGRVVFYDIRGKPQPLTV-LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 138 asgs~DG~V~IWDl~s~~~~~~~-l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
++|+.||.|++||+++....... ....+|...|++++|+|++ ..+.++++++.|+.|++||++...
T Consensus 174 ~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~---------~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV---------LLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC---------SSSEEEEEEESSSCEEEEEESSSS
T ss_pred EEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCC---------CCCCEEEEEecCCEEEEecCCCCC
Confidence 99999999999999876543222 2234799999999999961 014455666779999999997643
No 91
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=3.3e-22 Score=238.76 Aligned_cols=192 Identities=10% Similarity=0.072 Sum_probs=158.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|++++||+|+.||.|+|||....+....+. |...|.+++|+| ++ +|++++.|++|+|||+.+++. +..+. |
T Consensus 24 afspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~--~~~~V~~l~fsp-g~-~L~S~s~D~~v~lWd~~~~~~-~~~~~-~ 97 (902)
T 2oaj_A 24 AFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE--DRSAIKEMRFVK-GI-YLVVINAKDTVYVLSLYSQKV-LTTVF-V 97 (902)
T ss_dssp EEETTTTEEEEEETTSEEEEECSTTCEEEEECS--SCCCEEEEEEET-TT-EEEEEETTCEEEEEETTTCSE-EEEEE-C
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC--CCCCEEEEEEcC-CC-EEEEEECcCeEEEEECCCCcE-EEEEc-C
Confidence 689999999999999999999987776655543 677899999999 77 899999999999999998874 44443 7
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceee------------EeeCCCCeEEEEEeCC-CCEEEEEEcCCeEE
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSS------------CITYEAPFSSLAFIDD-DWILTAGTSNGRVV 147 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~------------~~~h~~~I~slafsPd-G~~Lasgs~DG~V~ 147 (648)
...|++++|+|++++|++|+.||.|++||++++++.. ...|.+.|.+++|+|+ +.+|++|+.||.|
T Consensus 98 ~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v- 176 (902)
T 2oaj_A 98 PGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL- 176 (902)
T ss_dssp SSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-
T ss_pred CCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-
Confidence 7889999999999999999999999999999887531 1247889999999996 5789999999999
Q ss_pred EEECCCCCCceEEEeec----------------CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 148 FYDIRGKPQPLTVLRAC----------------SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 148 IWDl~s~~~~~~~l~~~----------------~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
|||+++. .++..+..+ .|...|++++|+|+|++|++ ++.|+.|++||++..
T Consensus 177 lWd~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~las------------gs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 177 TYSLVEN-EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIIT------------IHEDNSLVFWDANSG 243 (902)
T ss_dssp EEETTTT-EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEE------------EETTCCEEEEETTTC
T ss_pred EEECCCC-ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEE------------EECCCeEEEEECCCC
Confidence 9999987 344444421 23578999999997666554 466999999999764
Q ss_pred C
Q 006360 212 V 212 (648)
Q Consensus 212 ~ 212 (648)
.
T Consensus 244 ~ 244 (902)
T 2oaj_A 244 H 244 (902)
T ss_dssp C
T ss_pred c
Confidence 4
No 92
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.89 E-value=7.1e-22 Score=213.26 Aligned_cols=201 Identities=13% Similarity=0.167 Sum_probs=161.0
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCC---Cc---eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC---CC
Q 006360 1 MYNC-KDEHLASISLSGDLILHNLAS---GA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT---GR 70 (648)
Q Consensus 1 AFSp-dG~~Lasgs~DG~V~IwDl~s---g~---~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~---t~ 70 (648)
+|+| ++++|++|+.||.|+|||+.+ +. ....+. |...|.+++|+++++ +|++++.|+.|+|||+. .+
T Consensus 70 ~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~-~l~s~s~dg~i~vwd~~~~~~~ 146 (437)
T 3gre_A 70 AVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD--CSSTVTQITMIPNFD-AFAVSSKDGQIIVLKVNHYQQE 146 (437)
T ss_dssp EEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE--CSSCEEEEEECTTSS-EEEEEETTSEEEEEEEEEEEET
T ss_pred EECCCCCCEEEEecCCceEEEeECcccccCcccceeeecc--CCCCEEEEEEeCCCC-EEEEEeCCCEEEEEEeccccCC
Confidence 4889 999999999999999999876 43 233333 788999999999888 89999999999999994 33
Q ss_pred CceeEEec----------c--CCCCeEEEE--EccCCCEEEEEeCCCeEEEEeCCCCceeeEee---CCCCeEEEEEeCC
Q 006360 71 SPKVSWLK----------Q--HSAPTAGIS--FSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT---YEAPFSSLAFIDD 133 (648)
Q Consensus 71 ~~~v~~l~----------~--H~~~V~sla--fsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~---h~~~I~slafsPd 133 (648)
.. ...+. . +...+.++. +++++.+|++++.|+.|++||+++++++..+. |...|.+++|+|+
T Consensus 147 ~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~ 225 (437)
T 3gre_A 147 SE-VKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEE 225 (437)
T ss_dssp TE-EEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTT
T ss_pred ce-eeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCC
Confidence 32 22111 2 556677777 55789999999999999999999999887774 7899999999999
Q ss_pred CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 134 DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 134 G~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
+.+|++|+.||.|+|||++.. .++..+. ..|...|.+++|+|. ...++.++++++.|+.|++||++....
T Consensus 226 ~~~l~s~~~dg~i~iwd~~~~-~~~~~~~-~~~~~~v~~~~~~~~--------~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 226 CCVLILGTTRGIIDIWDIRFN-VLIRSWS-FGDHAPITHVEVCQF--------YGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp SCEEEEEETTSCEEEEETTTT-EEEEEEB-CTTCEEEEEEEECTT--------TCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred CCEEEEEcCCCeEEEEEcCCc-cEEEEEe-cCCCCceEEEEeccc--------cCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 999999999999999999986 3334333 267789999988873 233566778888899999999986554
Q ss_pred cc
Q 006360 214 TS 215 (648)
Q Consensus 214 ~s 215 (648)
..
T Consensus 296 ~~ 297 (437)
T 3gre_A 296 QY 297 (437)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 93
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.89 E-value=1.2e-21 Score=213.14 Aligned_cols=192 Identities=13% Similarity=0.186 Sum_probs=161.2
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~ 81 (648)
+..++++|++|+.||.|++||+.+++.+..+.+ |...|.+++|++++ +|++|+.||+|++||+.++.. +..+.+|.
T Consensus 128 ~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~-h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~-~~~~~~h~ 203 (464)
T 3v7d_B 128 LQFEDNYVITGADDKMIRVYDSINKKFLLQLSG-HDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCC-THVFEGHN 203 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTEE-EEEECCCS
T ss_pred EEECCCEEEEEcCCCcEEEEECCCCcEEEEEeC-CCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcE-EEEECCCC
Confidence 345788999999999999999999999999986 77889999999887 799999999999999998874 67888999
Q ss_pred CCeEEEEEcc--CCCEEEEEeCCCeEEEEeCCCCcee-----------------------e-EeeCCCCeEEEEEeCCCC
Q 006360 82 APTAGISFSS--DDKIIASVGLDKKLYTYDPGSRRPS-----------------------S-CITYEAPFSSLAFIDDDW 135 (648)
Q Consensus 82 ~~V~slafsP--dg~~LaSgs~Dg~I~IWDl~tgk~v-----------------------~-~~~h~~~I~slafsPdG~ 135 (648)
..|.+++|++ ++.+|++++.|+.|++||+.++... . ...|...|.++ +++++
T Consensus 204 ~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~ 281 (464)
T 3v7d_B 204 STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGN 281 (464)
T ss_dssp SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETT
T ss_pred CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCC
Confidence 9999999984 7899999999999999999877532 1 22466777766 56789
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCc
Q 006360 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (648)
Q Consensus 136 ~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ 214 (648)
+|++++.||.|++||+++. .++..+. +|...|.+++|+|++++++ +++.|+.|++||++.....
T Consensus 282 ~l~~~~~d~~i~vwd~~~~-~~~~~~~--~~~~~v~~~~~~~~~~~l~------------sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 282 IVVSGSYDNTLIVWDVAQM-KCLYILS--GHTDRIYSTIYDHERKRCI------------SASMDTTIRIWDLENGELM 345 (464)
T ss_dssp EEEEEETTSCEEEEETTTT-EEEEEEC--CCSSCEEEEEEETTTTEEE------------EEETTSCEEEEETTTTEEE
T ss_pred EEEEEeCCCeEEEEECCCC-cEEEEec--CCCCCEEEEEEcCCCCEEE------------EEeCCCcEEEEECCCCcEE
Confidence 9999999999999999986 3344444 7999999999999766554 4466999999999765443
No 94
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.89 E-value=2.5e-21 Score=210.64 Aligned_cols=190 Identities=19% Similarity=0.235 Sum_probs=162.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEcc--CCCeEEEEEeCCCeEEEEECCCCCce-----
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGRSPK----- 73 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafsp--dg~~lLaSgs~Dg~V~IWDl~t~~~~----- 73 (648)
+|++++ +|++|+.||.|++||+.+++.+..+.+ |...|.+++|++ ++. +|++++.|+.|++||+......
T Consensus 169 ~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~ 245 (464)
T 3v7d_B 169 KYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEG-HNSTVRCLDIVEYKNIK-YIVTGSRDNTLHVWKLPKESSVPDHGE 245 (464)
T ss_dssp EECSTT-EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEEESSSCE-EEEEEETTSCEEEEECCCCCCC-----
T ss_pred EEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECC-CCCccEEEEEecCCCCC-EEEEEcCCCcEEEeeCCCCcccccccc
Confidence 367777 999999999999999999999988886 778899999985 444 8999999999999999765422
Q ss_pred -----------------eEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCC
Q 006360 74 -----------------VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDW 135 (648)
Q Consensus 74 -----------------v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~ 135 (648)
+..+.+|...|.++ ++++.+|++++.|+.|++||+++++++..+ .|...|.+++|+|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 323 (464)
T 3v7d_B 246 EHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERK 323 (464)
T ss_dssp -CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTT
T ss_pred cCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCC
Confidence 45677898888887 567999999999999999999999988777 5899999999999999
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCC
Q 006360 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 136 ~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
+|++|+.||.|++||++++ .++..+. +|...|.+++|++ .++++++.|+.|++||+....
T Consensus 324 ~l~sg~~dg~i~vwd~~~~-~~~~~~~--~h~~~v~~~~~~~--------------~~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 324 RCISASMDTTIRIWDLENG-ELMYTLQ--GHTALVGLLRLSD--------------KFLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp EEEEEETTSCEEEEETTTT-EEEEEEC--CCSSCEEEEEECS--------------SEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEeCCCcEEEEECCCC-cEEEEEe--CCCCcEEEEEEcC--------------CEEEEEeCCCcEEEEECCCCc
Confidence 9999999999999999987 3444444 7999999999963 256677789999999998644
No 95
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=6.8e-22 Score=215.80 Aligned_cols=194 Identities=12% Similarity=0.085 Sum_probs=161.9
Q ss_pred CccCCCCEE-EEEECCCcEEEEECC--CCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc---e
Q 006360 1 MYNCKDEHL-ASISLSGDLILHNLA--SGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---K 73 (648)
Q Consensus 1 AFSpdG~~L-asgs~DG~V~IwDl~--sg~~i~~l~~-~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~---~ 73 (648)
+|+|++++| ++++.||.|+|||+. +++.+..+.. .+...|.+++|+|+++ +|++++.|+.|++||+..... .
T Consensus 109 ~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 109 RLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT-TVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS-EEEEEETTSEEEEEETTSCCCSSCC
T ss_pred EEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC-EEEEEeCCCcEEEEecCCccccccc
Confidence 489999996 889999999999998 8888887763 2567899999999998 899999999999999976653 1
Q ss_pred eEEeccCCCCeEEEEEccC---CCEEEEEeCCCeEEEEeCCCCceeeE-e-eCCCCeEEEEEeCCCCEEEEEEcCCeEEE
Q 006360 74 VSWLKQHSAPTAGISFSSD---DKIIASVGLDKKLYTYDPGSRRPSSC-I-TYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (648)
Q Consensus 74 v~~l~~H~~~V~slafsPd---g~~LaSgs~Dg~I~IWDl~tgk~v~~-~-~h~~~I~slafsPdG~~Lasgs~DG~V~I 148 (648)
...+.+|...|++++|+|+ +++|++++.|+.|++||+++++++.. + .|...|.+++|+ ++.+|++++.|+.|+|
T Consensus 188 ~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~v 266 (450)
T 2vdu_B 188 QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFA 266 (450)
T ss_dssp CCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEE
T ss_pred ceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEE
Confidence 2356789999999999999 99999999999999999999987765 3 689999999999 9999999999999999
Q ss_pred EECCCCCCceEEEeec-----------------------CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEc
Q 006360 149 YDIRGKPQPLTVLRAC-----------------------SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILM 205 (648)
Q Consensus 149 WDl~s~~~~~~~l~~~-----------------------~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~Ikv 205 (648)
||++++. ++..+... .+...|.+++|+|++++++++ +..|+.|++
T Consensus 267 wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-----------~~~d~~i~i 334 (450)
T 2vdu_B 267 WDWKTGK-NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFF-----------VEATKCIII 334 (450)
T ss_dssp EETTTCC-EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEE-----------ETTCSEEEE
T ss_pred EECCCCc-EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEE-----------ECCCCeEEE
Confidence 9999874 34444321 234578999999976665544 225899999
Q ss_pred CCC
Q 006360 206 PDP 208 (648)
Q Consensus 206 WDl 208 (648)
||+
T Consensus 335 w~~ 337 (450)
T 2vdu_B 335 LEM 337 (450)
T ss_dssp EEE
T ss_pred EEe
Confidence 998
No 96
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.88 E-value=1.3e-21 Score=207.48 Aligned_cols=174 Identities=10% Similarity=0.108 Sum_probs=129.1
Q ss_pred CCcEEEEEC-CCCceeEEEeCCCCCcEEEEEEcc---CCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC---CCeEEE
Q 006360 15 SGDLILHNL-ASGAKAAELKDPNEQVLRVLDYSR---NSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS---APTAGI 87 (648)
Q Consensus 15 DG~V~IwDl-~sg~~i~~l~~~~~~~V~~Vafsp---dg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~---~~V~sl 87 (648)
|+.|++|++ .+|+.+..+.. |...++.++|++ ++. +|++++.|++|+|||+.+++. ++.+.+|. ..+.++
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~-~~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk~-l~tL~g~~~~v~~v~~v 232 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFL-MPPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQL-LKKMHIDDSYQASVCHK 232 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEE-CCCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTCCE-EEEEECCC---CCCEEE
T ss_pred CCcEEEEEECCCCceeeeecc-CCCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCCcE-EEEEcCCCcceeeeEEE
Confidence 777888887 44666666665 555566677777 455 899999999999999999885 56676543 467888
Q ss_pred EEccCCCEE------------EEEeCCCeEEEEeCCCCceeeEe------eCCCCeEEEEEeCCCCEEEEEEcCCeEEEE
Q 006360 88 SFSSDDKII------------ASVGLDKKLYTYDPGSRRPSSCI------TYEAPFSSLAFIDDDWILTAGTSNGRVVFY 149 (648)
Q Consensus 88 afsPdg~~L------------aSgs~Dg~I~IWDl~tgk~v~~~------~h~~~I~slafsPdG~~Lasgs~DG~V~IW 149 (648)
+|+|++.++ ++|+.|++|++||..+++.+..+ +|...+.+..++ +.++++++.|++|+||
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIW 310 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIW 310 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEE
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEE
Confidence 999999887 56788999999999999887654 344444444443 7899999999999999
Q ss_pred ECCCCCCceEEEeecCCCCCee-EEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCC
Q 006360 150 DIRGKPQPLTVLRACSSSEAVS-SLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (648)
Q Consensus 150 Dl~s~~~~~~~l~~~~h~~~Vt-sLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDl 208 (648)
|+.++ +.+..+. +|...+. +++|+|||++|+++ +.|++|+|||+
T Consensus 311 Dl~tG-k~l~tL~--gH~~~vvs~vafSPDG~~LaSG------------S~D~TIklWd~ 355 (356)
T 2w18_A 311 DLLLG-QCTALLP--PVSDQHWSFVKWSGTDSHLLAG------------QKDGNIFVYHY 355 (356)
T ss_dssp ETTTC-SEEEEEC--CC--CCCCEEEECSSSSEEEEE------------CTTSCEEEEEE
T ss_pred ECCCC-cEEEEec--CCCCCeEEEEEECCCCCEEEEE------------ECCCcEEEecC
Confidence 99988 4455555 6776655 68999977666554 67999999985
No 97
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.88 E-value=1.6e-21 Score=201.93 Aligned_cols=194 Identities=10% Similarity=0.047 Sum_probs=157.1
Q ss_pred CccCCCC-EEEEEECCCcEEEEEC-CCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC--------
Q 006360 1 MYNCKDE-HLASISLSGDLILHNL-ASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG-------- 69 (648)
Q Consensus 1 AFSpdG~-~Lasgs~DG~V~IwDl-~sg~~i~~l~~-~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t-------- 69 (648)
+|+|+++ +|++++.||.|++||+ .+++. ..+.. .|...|.+++|++ ++ +|++++.|+.|++||+.+
T Consensus 63 ~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~ 139 (342)
T 1yfq_A 63 NFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAV 139 (342)
T ss_dssp EEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEE
T ss_pred EECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccc
Confidence 4889999 9999999999999999 77765 44543 1677899999999 66 899999999999999976
Q ss_pred -CCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC-Ccee---eEeeCCCCeEEEEEeC-CCCEEEEEEcC
Q 006360 70 -RSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-RRPS---SCITYEAPFSSLAFID-DDWILTAGTSN 143 (648)
Q Consensus 70 -~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~t-gk~v---~~~~h~~~I~slafsP-dG~~Lasgs~D 143 (648)
... +..+. |...|.+++|++++ |++++.|+.|++||+++ +... ....+...|.+++|+| ++.+|++++.|
T Consensus 140 ~~~~-~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d 215 (342)
T 1yfq_A 140 KNLN-SNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSID 215 (342)
T ss_dssp EESC-SSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETT
T ss_pred cCCe-eeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecC
Confidence 443 23333 88999999999877 99999999999999998 5532 2335788999999999 99999999999
Q ss_pred CeEEEEECCCC-----CCceEEEeec-------CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 144 GRVVFYDIRGK-----PQPLTVLRAC-------SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 144 G~V~IWDl~s~-----~~~~~~l~~~-------~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
|.|+|||++.. ......+..+ .|...|.+++|+|++++|+++ +.|+.|++||+...
T Consensus 216 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~------------~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 216 GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA------------GSDGIISCWNLQTR 283 (342)
T ss_dssp SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE------------ETTSCEEEEETTTT
T ss_pred CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEe------------cCCceEEEEcCccH
Confidence 99999999876 3555666632 124499999999977666554 56999999998755
Q ss_pred CC
Q 006360 212 VT 213 (648)
Q Consensus 212 ~~ 213 (648)
..
T Consensus 284 ~~ 285 (342)
T 1yfq_A 284 KK 285 (342)
T ss_dssp EE
T ss_pred hH
Confidence 43
No 98
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=9.5e-22 Score=221.28 Aligned_cols=197 Identities=10% Similarity=0.064 Sum_probs=143.4
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCcee----EEEeCCCCCcEEEEEEccCC-----CeEEEEEeCCCeEEEEECCCCCce
Q 006360 3 NCKDEHLASISLSGDLILHNLASGAKA----AELKDPNEQVLRVLDYSRNS-----RHLLVTAGDDGTLHLWDTTGRSPK 73 (648)
Q Consensus 3 SpdG~~Lasgs~DG~V~IwDl~sg~~i----~~l~~~~~~~V~~Vafspdg-----~~lLaSgs~Dg~V~IWDl~t~~~~ 73 (648)
+|+++.|++++.|++|+|||+.+++.. ..+. +|...|..|+|+|++ ..+|++++.||+|+|||+......
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~-~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~ 248 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV-HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATD 248 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEE-ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEE-ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccc
Confidence 455566677788999999999877643 2233 366789999999972 238999999999999999765321
Q ss_pred ----------eEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCc-eeeEe-eCCCCeEEE--EEeCCC-CEEE
Q 006360 74 ----------VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRR-PSSCI-TYEAPFSSL--AFIDDD-WILT 138 (648)
Q Consensus 74 ----------v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk-~v~~~-~h~~~I~sl--afsPdG-~~La 138 (648)
...+.+|...|++++|+++ .+|++|+.||+|++||++++. +...+ .|...|.+| +|+++| .+|+
T Consensus 249 ~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~la 327 (524)
T 2j04_B 249 VHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVS 327 (524)
T ss_dssp SSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEE
T ss_pred cccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEE
Confidence 2367889999999999985 489999999999999999764 33433 699999999 578888 8999
Q ss_pred EEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCc
Q 006360 139 AGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (648)
Q Consensus 139 sgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ 214 (648)
+++.|++|+|||+++... ...+..+.....|.+++|+|+++.+++ ++.|+.|++||++.....
T Consensus 328 S~S~D~tvklWD~~~~~~-~~~~~~~~~~~~v~~v~fsp~~~~l~s------------~~~d~tv~lwd~~~~~~~ 390 (524)
T 2j04_B 328 TVAVDGYFYIFNPKDIAT-TKTTVSRFRGSNLVPVVYCPQIYSYIY------------SDGASSLRAVPSRAAFAV 390 (524)
T ss_dssp EEETTSEEEEECGGGHHH-HCEEEEECSCCSCCCEEEETTTTEEEE------------ECSSSEEEEEETTCTTCC
T ss_pred EeccCCeEEEEECCCCCc-ccccccccccCcccceEeCCCcCeEEE------------eCCCCcEEEEECcccccc
Confidence 999999999999997633 334442222245889999997655544 456899999999875543
No 99
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.87 E-value=8.8e-21 Score=205.13 Aligned_cols=200 Identities=15% Similarity=0.198 Sum_probs=162.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~-~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~ 79 (648)
+|+++ ++|++| .|++|+|||+.+++++..+.. .|...|++|+|+|+++ +|++|+.||.|+|||+.+++. +..+.+
T Consensus 112 ~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~-~lasgs~Dg~v~iWd~~~~~~-~~~~~~ 187 (420)
T 4gga_A 112 DWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQQKR-LRNMTS 187 (420)
T ss_dssp EECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE-EEEECC
T ss_pred EECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCC-EEEEEECCCeEEEEEcCCCcE-EEEEeC
Confidence 36654 577766 489999999999998887764 3567899999999998 899999999999999998875 678899
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCce-eeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCc
Q 006360 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP-SSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (648)
Q Consensus 80 H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~-v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~ 157 (648)
|...|.+++|+ +.+|++|+.|+.+++||...... +..+ .|...+.++.|+|++.++++++.|+.|+|||.......
T Consensus 188 h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~ 265 (420)
T 4gga_A 188 HSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 265 (420)
T ss_dssp CSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSC
T ss_pred CCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccccc
Confidence 99999998875 78999999999999999987543 3333 68999999999999999999999999999999875432
Q ss_pred e-EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcc
Q 006360 158 L-TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (648)
Q Consensus 158 ~-~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~s 215 (648)
. .......|...|.+++|+|++..++.. .+++.|+.|++||+.......
T Consensus 266 ~~~~~~~~~~~~~V~~~~~~p~~~~~la~---------~~gs~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 266 WVPLQTFTQHQGAVKAVAWCPWQSNVLAT---------GGGTSDRHIRIWNVCSGACLS 315 (420)
T ss_dssp SCCSEEECCCSSCEEEEEECTTCTTEEEE---------EECTTTCEEEEEETTTTEEEE
T ss_pred ceeeeeecccCCceeeeeeCCCcccEEEE---------EeecCCCEEEEEeCCccccce
Confidence 1 112233789999999999975544322 345679999999998655443
No 100
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=7.9e-22 Score=212.33 Aligned_cols=207 Identities=12% Similarity=0.110 Sum_probs=148.0
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEE--E--eCCCCCcEEEEEEcc--------CCCeEEEEEeCCCeEEEEECCC
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAE--L--KDPNEQVLRVLDYSR--------NSRHLLVTAGDDGTLHLWDTTG 69 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~--l--~~~~~~~V~~Vafsp--------dg~~lLaSgs~Dg~V~IWDl~t 69 (648)
+.+++.+|++++.|++|+|||+..+..... + ...|...|++|+|+| +++ +|++|+.|++|+|||+.+
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEETTSEEEEEEEET
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCC-EEEEEECCCeEEEEECCC
Confidence 455677899999999999999988765432 1 124788999999997 565 999999999999999987
Q ss_pred CCceeEEeccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEeCCCCceeeE--------------------------eeCC
Q 006360 70 RSPKVSWLKQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPGSRRPSSC--------------------------ITYE 122 (648)
Q Consensus 70 ~~~~v~~l~~H~~~V~slafsPdg-~~LaSgs~Dg~I~IWDl~tgk~v~~--------------------------~~h~ 122 (648)
..+ +..+..|...|.+++|+|++ .+|++++.|++|++||+++++.... ..|.
T Consensus 176 ~~~-~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 176 EGP-ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp TEE-EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred Cce-eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 764 55677888999999999976 5899999999999999988754321 1356
Q ss_pred CCeEEEEEe-CCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEE--------eccCCCCeE
Q 006360 123 APFSSLAFI-DDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFID--------ETTCKAETA 193 (648)
Q Consensus 123 ~~I~slafs-PdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las--------~~~~~~~~~ 193 (648)
..+.++.|. +||..|++++.|+.|++||+..... ...+. .|...+..+.+.++++.+.. .....++.+
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~-~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND-YNEIS--DSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYF 331 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTTSEEEEEEC----------------------CCSCSEEEECSSCCSSCCEECSSCTTEE
T ss_pred ccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC-CceEe--eecCccccEEEccccccccccCcceeEEEccCCCCEE
Confidence 678899987 7999999999999999999987632 22333 56667777777766443221 112346677
Q ss_pred EEEeeCCCeEEcCCCCCCCC
Q 006360 194 LLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 194 lvs~s~D~~IkvWDlr~~~~ 213 (648)
+++++.|+.|++||+.....
T Consensus 332 ~~sgs~Dg~V~lwd~~~~~~ 351 (393)
T 4gq1_A 332 ATAHSQHGLIQLINTYEKDS 351 (393)
T ss_dssp EEEETTTTEEEEEETTCTTC
T ss_pred EEEECCCCEEEEEECCCCcE
Confidence 88888999999999875544
No 101
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.87 E-value=4.8e-21 Score=214.17 Aligned_cols=195 Identities=14% Similarity=0.157 Sum_probs=163.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCC----ceeEEEeCCCCCc-EEEEEEcc--CCCeEEEEEeCCCeEEEEECCCC---
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASG----AKAAELKDPNEQV-LRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGR--- 70 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg----~~i~~l~~~~~~~-V~~Vafsp--dg~~lLaSgs~Dg~V~IWDl~t~--- 70 (648)
+|+|+|++|++++ ++.|+|||+.++ +.+..+.+ |... |.+++|+| +++ +|++++.||.|+|||+.++
T Consensus 25 ~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~-h~~~~v~~~~~sp~~~~~-~l~s~~~dg~v~vw~~~~~~~~ 101 (615)
T 1pgu_A 25 SYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTG-HGSSVVTTVKFSPIKGSQ-YLCSGDESGKVIVWGWTFDKES 101 (615)
T ss_dssp EEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECT-TTTSCEEEEEECSSTTCC-EEEEEETTSEEEEEEEEEEGGG
T ss_pred EECCCCCEEEEec-CCeEEEEECCCCCCccccceEEec-CCCceEEEEEECcCCCCC-EEEEecCCCEEEEEeCCCCccc
Confidence 5899999999998 789999999988 88888887 6667 99999999 988 8999999999999999643
Q ss_pred ----CceeEEeccCCCCeEEEEEccCCCEEEEEeCC----CeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCC-EEEEE
Q 006360 71 ----SPKVSWLKQHSAPTAGISFSSDDKIIASVGLD----KKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDW-ILTAG 140 (648)
Q Consensus 71 ----~~~v~~l~~H~~~V~slafsPdg~~LaSgs~D----g~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~-~Lasg 140 (648)
...+..+..|...|.+++|+|++++|++++.| +.|++|| .++.+..+ .|...|.+++|+|++. +|+++
T Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 179 (615)
T 1pgu_A 102 NSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTV 179 (615)
T ss_dssp TEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEE
T ss_pred ccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEE
Confidence 22356778899999999999999999999988 6899998 44555444 6899999999999997 89999
Q ss_pred EcCCeEEEEECCCCCCceEEEeecCCCC---CeeEEEEccC-CCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcc
Q 006360 141 TSNGRVVFYDIRGKPQPLTVLRACSSSE---AVSSLCWQRA-KPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (648)
Q Consensus 141 s~DG~V~IWDl~s~~~~~~~l~~~~h~~---~VtsLafspd-g~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~s 215 (648)
+.|+.|++||+... +....+. .|.. .|.+++|+|+ ++++++ ++.|+.|++||+.......
T Consensus 180 ~~d~~v~vwd~~~~-~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~------------~~~dg~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 180 GDDGSVVFYQGPPF-KFSASDR--THHKQGSFVRDVEFSPDSGEFVIT------------VGSDRKISCFDGKSGEFLK 243 (615)
T ss_dssp ETTTEEEEEETTTB-EEEEEEC--SSSCTTCCEEEEEECSTTCCEEEE------------EETTCCEEEEETTTCCEEE
T ss_pred eCCCcEEEEeCCCc-ceeeeec--ccCCCCceEEEEEECCCCCCEEEE------------EeCCCeEEEEECCCCCEeE
Confidence 99999999999876 3344444 6888 9999999997 655544 4669999999987655433
No 102
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.87 E-value=1.5e-20 Score=203.97 Aligned_cols=181 Identities=19% Similarity=0.313 Sum_probs=153.4
Q ss_pred CCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce--eEEeccCC
Q 006360 4 CKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK--VSWLKQHS 81 (648)
Q Consensus 4 pdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~--v~~l~~H~ 81 (648)
.++++|++|+.||.|++||+.+++.+..+.+ |...|.+++|++ . +|++|+.|+.|++||+.+.... ...+.+|.
T Consensus 181 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 256 (435)
T 1p22_A 181 YDERVIITGSSDSTVRVWDVNTGEMLNTLIH-HCEAVLHLRFNN--G-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 256 (435)
T ss_dssp CCSSEEEEEETTSCEEEEESSSCCEEEEECC-CCSCEEEEECCT--T-EEEEEETTSCEEEEECSSSSCCEEEEEECCCS
T ss_pred ECCCEEEEEcCCCeEEEEECCCCcEEEEEcC-CCCcEEEEEEcC--C-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCC
Confidence 4788999999999999999999999988886 677889999974 3 8999999999999999876642 26678999
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 006360 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (648)
Q Consensus 82 ~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~ 160 (648)
..|.+++| ++++|++++.|+.|++||+++++++..+ .|...|.++.|+ +.+|++|+.||.|++||+++. .++..
T Consensus 257 ~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~-~~~~~ 331 (435)
T 1p22_A 257 AAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG-ACLRV 331 (435)
T ss_dssp SCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC-CEEEE
T ss_pred CcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC-CEEEE
Confidence 99999999 6899999999999999999999988777 488999999994 679999999999999999987 44445
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
+. +|...|.+++| ++. ++++++.|+.|++||+.
T Consensus 332 ~~--~h~~~v~~~~~--~~~------------~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 332 LE--GHEELVRCIRF--DNK------------RIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp EC--CCSSCEEEEEC--CSS------------EEEEEETTSCEEEEEHH
T ss_pred Ee--CCcCcEEEEEe--cCC------------EEEEEeCCCcEEEEECC
Confidence 54 79999999998 333 44555668888888864
No 103
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.5e-21 Score=226.44 Aligned_cols=197 Identities=13% Similarity=0.180 Sum_probs=163.2
Q ss_pred CccCC--CCEEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ce
Q 006360 1 MYNCK--DEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PK 73 (648)
Q Consensus 1 AFSpd--G~~Lasgs~DG~V~IwDl~sg~--~i~~l~~~~~~~V~~Vafspd--g~~lLaSgs~Dg~V~IWDl~t~~-~~ 73 (648)
+|+++ +++|++|+.||.|++||+.+++ .+..+.. |...|.+++|+|+ ++ +|++|+.||.|++||+.... ..
T Consensus 60 ~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~ 137 (753)
T 3jro_A 60 DWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS 137 (753)
T ss_dssp EECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCC
T ss_pred EecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccC-CCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcc
Confidence 37777 9999999999999999998886 5555654 7788999999999 76 89999999999999997763 23
Q ss_pred eEEeccCCCCeEEEEEcc-------------CCCEEEEEeCCCeEEEEeCCCCc----eeeEe-eCCCCeEEEEEeCC--
Q 006360 74 VSWLKQHSAPTAGISFSS-------------DDKIIASVGLDKKLYTYDPGSRR----PSSCI-TYEAPFSSLAFIDD-- 133 (648)
Q Consensus 74 v~~l~~H~~~V~slafsP-------------dg~~LaSgs~Dg~I~IWDl~tgk----~v~~~-~h~~~I~slafsPd-- 133 (648)
...+..|...|.+++|+| ++.+|++|+.||.|++||++++. +...+ .|...|.+++|+|+
T Consensus 138 ~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~ 217 (753)
T 3jro_A 138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 217 (753)
T ss_dssp CEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred eeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCC
Confidence 456788999999999999 58999999999999999998874 33333 58999999999999
Q ss_pred -CCEEEEEEcCCeEEEEECCCCCCce--EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 134 -DWILTAGTSNGRVVFYDIRGKPQPL--TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 134 -G~~Lasgs~DG~V~IWDl~s~~~~~--~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
+.+|++++.||.|+|||++...... .......|...|++++|+|+|++++++ +.|+.|++||+..
T Consensus 218 ~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~------------s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 218 LRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS------------GGDNKVTLWKENL 285 (753)
T ss_dssp SSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE------------CSSSCEECCBCCS
T ss_pred CCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE------------cCCCEEEEEecCC
Confidence 8999999999999999998753211 222333688999999999977766554 5699999999985
Q ss_pred C
Q 006360 211 S 211 (648)
Q Consensus 211 ~ 211 (648)
.
T Consensus 286 ~ 286 (753)
T 3jro_A 286 E 286 (753)
T ss_dssp S
T ss_pred C
Confidence 3
No 104
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.87 E-value=9.3e-21 Score=231.36 Aligned_cols=181 Identities=19% Similarity=0.270 Sum_probs=157.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCC-CeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNS-RHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg-~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~ 79 (648)
+|+|+|++|++++.||.|+|||+.+++.+..+.+ |...|.+++|++++ ..++++|+.|+.|++||+.++.. +..+.+
T Consensus 664 ~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~-~~~~~~ 741 (1249)
T 3sfz_A 664 AFSSDDSYIATCSADKKVKIWDSATGKLVHTYDE-HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC-RNTMFG 741 (1249)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE-EEEECC
T ss_pred EEecCCCEEEEEeCCCeEEEEECCCCceEEEEcC-CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch-hheecC
Confidence 5899999999999999999999999999999986 77889999999953 33789999999999999998875 677889
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe----------------------------------------
Q 006360 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI---------------------------------------- 119 (648)
Q Consensus 80 H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~---------------------------------------- 119 (648)
|...|++++|+|++++|++++.||.|++||+++++....+
T Consensus 742 h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v 821 (1249)
T 3sfz_A 742 HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKV 821 (1249)
T ss_dssp CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEE
T ss_pred CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcE
Confidence 9999999999999999999999999999998766432221
Q ss_pred ----------------eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEE
Q 006360 120 ----------------TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFI 183 (648)
Q Consensus 120 ----------------~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~La 183 (648)
.|...|.+++|+|++.++++++.||.|++||+.+. .....+. +|...|++++|+|+|++++
T Consensus 822 ~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~--~h~~~v~~v~~spdg~~l~ 898 (1249)
T 3sfz_A 822 LLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR-LKVADCR--GHLSWVHGVMFSPDGSSFL 898 (1249)
T ss_dssp EEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT-EEEEEEC--CCSSCEEEEEECTTSSEEE
T ss_pred EEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceeeecC--CCccceEEEEECCCCCEEE
Confidence 35678899999999999999999999999999987 3334444 8999999999999988887
Q ss_pred Eec
Q 006360 184 DET 186 (648)
Q Consensus 184 s~~ 186 (648)
+++
T Consensus 899 s~s 901 (1249)
T 3sfz_A 899 TAS 901 (1249)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 105
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.9e-20 Score=190.70 Aligned_cols=184 Identities=12% Similarity=0.106 Sum_probs=154.9
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCCceeEEecc-CCC
Q 006360 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ-HSA 82 (648)
Q Consensus 5 dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafsp-dg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~-H~~ 82 (648)
++++|++++.||.|++|| .++.+..+.. |...+.+++|.+ +++ +|++++.|+.|++||.. . ....+.. |..
T Consensus 113 ~~~~l~~~~~d~~i~~~d--~~~~~~~~~~-~~~~v~~~~~~~~~~~-~l~~~~~d~~i~i~d~~--~-~~~~~~~~~~~ 185 (313)
T 3odt_A 113 QDGVVISGSWDKTAKVWK--EGSLVYNLQA-HNASVWDAKVVSFSEN-KFLTASADKTIKLWQND--K-VIKTFSGIHND 185 (313)
T ss_dssp ETTEEEEEETTSEEEEEE--TTEEEEEEEC-CSSCEEEEEEEETTTT-EEEEEETTSCEEEEETT--E-EEEEECSSCSS
T ss_pred cCCEEEEEeCCCCEEEEc--CCcEEEeccc-CCCceeEEEEccCCCC-EEEEEECCCCEEEEecC--c-eEEEEeccCcc
Confidence 678999999999999999 6777777776 677888899998 565 89999999999999933 2 2445555 999
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEE
Q 006360 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVL 161 (648)
Q Consensus 83 ~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l 161 (648)
.|.+++|+|++. |++++.|+.|++||+++++.+..+. |...|.+++|+|++ .|++++.||.|++||+++. .+...+
T Consensus 186 ~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~-~~~~~~ 262 (313)
T 3odt_A 186 VVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENG-SLKQVI 262 (313)
T ss_dssp CEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTC-CEEEEE
T ss_pred cEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCC-ceeEEE
Confidence 999999999888 9999999999999999999887774 89999999999999 5889999999999999987 444555
Q ss_pred eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 162 RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 162 ~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
. .|...|.+++|+|++++ ++++.|+.|++||+.....
T Consensus 263 ~--~~~~~i~~~~~~~~~~~-------------~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 263 T--LPAISIWSVDCMSNGDI-------------IVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp E--CSSSCEEEEEECTTSCE-------------EEEETTSCEEEEESCGGGC
T ss_pred e--ccCceEEEEEEccCCCE-------------EEEeCCCcEEEEeCCCCce
Confidence 5 68889999999997553 3345699999999975443
No 106
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.3e-20 Score=191.90 Aligned_cols=189 Identities=13% Similarity=0.136 Sum_probs=155.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCC---ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASG---AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg---~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l 77 (648)
+|+|++++|++++.||.|++|++... +.+..+.. |...|.+++| +++ +|++++.|+.|++|| ... .+..+
T Consensus 66 ~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--~~~-~l~~~~~d~~i~~~d--~~~-~~~~~ 138 (313)
T 3odt_A 66 CYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIG-HQGNVCSLSF--QDG-VVISGSWDKTAKVWK--EGS-LVYNL 138 (313)
T ss_dssp EEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECC-CSSCEEEEEE--ETT-EEEEEETTSEEEEEE--TTE-EEEEE
T ss_pred EECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhh-cccCEEEEEe--cCC-EEEEEeCCCCEEEEc--CCc-EEEec
Confidence 48999999999999999999998654 45566665 7788899999 455 899999999999999 333 36678
Q ss_pred ccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCC
Q 006360 78 KQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (648)
Q Consensus 78 ~~H~~~V~slafsP-dg~~LaSgs~Dg~I~IWDl~tgk~v~~~--~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~ 154 (648)
..|...|.+++|.| ++.+|++++.|+.|++||. ++....+ .+...|.+++|+|++. +++++.||.|++||+++.
T Consensus 139 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~ 215 (313)
T 3odt_A 139 QAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG 215 (313)
T ss_dssp ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC
T ss_pred ccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch
Confidence 89999999999999 9999999999999999993 3444444 3889999999999988 999999999999999987
Q ss_pred CCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcc
Q 006360 155 PQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (648)
Q Consensus 155 ~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~s 215 (648)
.++..+. .|...|++++|+|++. +++++.|+.|++||+.......
T Consensus 216 -~~~~~~~--~~~~~i~~~~~~~~~~-------------l~~~~~dg~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 216 -DVLRTYE--GHESFVYCIKLLPNGD-------------IVSCGEDRTVRIWSKENGSLKQ 260 (313)
T ss_dssp -CEEEEEE--CCSSCEEEEEECTTSC-------------EEEEETTSEEEEECTTTCCEEE
T ss_pred -hhhhhhh--cCCceEEEEEEecCCC-------------EEEEecCCEEEEEECCCCceeE
Confidence 4445554 7999999999999652 4455679999999998765433
No 107
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.87 E-value=6.9e-21 Score=212.87 Aligned_cols=188 Identities=13% Similarity=0.196 Sum_probs=156.8
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeC-CCeEEEEECCCCCceeEEeccC
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-DGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~-Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
|+|++.+++++ .++.+.+|++.+++.+..+. +...+.+++|+ ++ +|++++. |+.|++||+.+.......+..|
T Consensus 414 ~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~-~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~ 487 (615)
T 1pgu_A 414 ANNDGFTAVLT-NDDDLLILQSFTGDIIKSVR--LNSPGSAVSLS--QN-YVAVGLEEGNTIQVFKLSDLEVSFDLKTPL 487 (615)
T ss_dssp ECSSSEEEEEE-TTSEEEEEETTTCCEEEEEE--CSSCEEEEEEC--SS-EEEEEETTTSCEEEEETTEEEEEEECSSCC
T ss_pred EcCCCCEEEEe-CCCceEEEeccCCceeeecc--cCCCceEEEEc--CC-EEEEeecCCCeEEEEECCCccccccccCCc
Confidence 55666555554 56667777766777777776 66788999999 55 8999999 9999999998875322567889
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee--CCCCeEEEEEeC----------CCCEEEEEEcCCeEEE
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT--YEAPFSSLAFID----------DDWILTAGTSNGRVVF 148 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~--h~~~I~slafsP----------dG~~Lasgs~DG~V~I 148 (648)
...|.+++|+|++++|++++.|+.|++||+.+++.+..+. |...|.+++|+| ++.+|++++.||.|+|
T Consensus 488 ~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~i 567 (615)
T 1pgu_A 488 RAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI 567 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEE
T ss_pred cCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEE
Confidence 9999999999999999999999999999999999887764 899999999999 9999999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 149 WDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
||+.+...++..+. +|...|++++|+|+++ +++++.|+.|++||+..
T Consensus 568 w~~~~~~~~~~~~~--~h~~~v~~l~~s~~~~-------------l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 568 YSVKRPMKIIKALN--AHKDGVNNLLWETPST-------------LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EESSCTTCCEEETT--SSTTCEEEEEEEETTE-------------EEEEETTSCEEEEEEC-
T ss_pred EECCCCceechhhh--cCccceEEEEEcCCCC-------------eEEecCCceEEEEeeec
Confidence 99998755555554 8999999999999654 45557799999999853
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.87 E-value=6.2e-21 Score=213.97 Aligned_cols=173 Identities=13% Similarity=0.194 Sum_probs=142.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCC----CcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc----
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNE----QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---- 72 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~----~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~---- 72 (648)
+|||||++||+++.||.|+|||... ++..+. ++. ..|.+++|+|+|+ +|++|+.||+|+|||+.++..
T Consensus 92 awSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~-~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 92 KPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIES-SIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp EECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSS-CEEEEETTSEEEEEECCCCTTTCCC
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCC-EEEEEcCCCEEEEEECCCCcccccc
Confidence 5999999999999999999999543 666665 442 3699999999999 899999999999999988752
Q ss_pred --eeEEe----ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee---eEe--eCCCCeEEEEEeCCCCEEEEEE
Q 006360 73 --KVSWL----KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS---SCI--TYEAPFSSLAFIDDDWILTAGT 141 (648)
Q Consensus 73 --~v~~l----~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v---~~~--~h~~~I~slafsPdG~~Lasgs 141 (648)
.+..+ .+|...|.+++|+||+ +++++.|+.|++||+..++.. ..+ .|...|.+++|+ |++|++++
T Consensus 168 ~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~ 243 (588)
T 2j04_A 168 FYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC 243 (588)
T ss_dssp CEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC
T ss_pred ceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe
Confidence 34555 6788899999999999 888999999999999887743 344 477899999999 68898887
Q ss_pred cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEE--ccCCCeEEEe
Q 006360 142 SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCW--QRAKPVFIDE 185 (648)
Q Consensus 142 ~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLaf--spdg~~Las~ 185 (648)
++.|++||+.+... ..+. .+|...|.+++| +|++..++++
T Consensus 244 -~~tIkLWd~~~~~~--~~~~-~gh~~~V~~va~~~s~d~~~La~a 285 (588)
T 2j04_A 244 -PGYVHKIDLKNYSI--SSLK-TGSLENFHIIPLNHEKESTILLMS 285 (588)
T ss_dssp -SSEEEEEETTTTEE--EEEE-CSCCSCCCEEEETTCSSCEEEEEC
T ss_pred -CCeEEEEECCCCeE--EEEE-cCCCceEEEEEeeeCCCCCEEEEE
Confidence 69999999998631 1222 379999999999 8876666555
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.87 E-value=2.5e-20 Score=202.33 Aligned_cols=188 Identities=14% Similarity=0.260 Sum_probs=159.9
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~ 81 (648)
+..++++|++|+.||.|++||+.+++.+..+.+ |...|.+++| +++ +|++|+.||.|++||+.+++. +..+..|.
T Consensus 139 ~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~--~~~-~l~sg~~dg~i~vwd~~~~~~-~~~~~~h~ 213 (435)
T 1p22_A 139 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQY--DER-VIITGSSDSTVRVWDVNTGEM-LNTLIHHC 213 (435)
T ss_dssp EECCSSEEEEEESSSCEEEEESSSCCEEEEECC-CSSCEEEEEC--CSS-EEEEEETTSCEEEEESSSCCE-EEEECCCC
T ss_pred EEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcC-CCCcEEEEEE--CCC-EEEEEcCCCeEEEEECCCCcE-EEEEcCCC
Confidence 456899999999999999999999999998886 7778898988 555 899999999999999998875 67888999
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee---eE-eeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCc
Q 006360 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS---SC-ITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (648)
Q Consensus 82 ~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v---~~-~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~ 157 (648)
..|.+++|+ +.+|++++.|+.|++||+.+++.. .. ..|...|.+++| ++++|++|+.||.|++||+++. ..
T Consensus 214 ~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~-~~ 288 (435)
T 1p22_A 214 EAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC-EF 288 (435)
T ss_dssp SCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC-CE
T ss_pred CcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC-cE
Confidence 999999997 569999999999999999987754 22 368899999999 6889999999999999999987 44
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcc
Q 006360 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (648)
Q Consensus 158 ~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~s 215 (648)
+..+. +|...|.++.|+. .++++++.|+.|++||++......
T Consensus 289 ~~~~~--~~~~~v~~~~~~~--------------~~l~~g~~dg~i~iwd~~~~~~~~ 330 (435)
T 1p22_A 289 VRTLN--GHKRGIACLQYRD--------------RLVVSGSSDNTIRLWDIECGACLR 330 (435)
T ss_dssp EEEEE--CCSSCEEEEEEET--------------TEEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEc--CCCCcEEEEEeCC--------------CEEEEEeCCCeEEEEECCCCCEEE
Confidence 45555 7899999999842 356666789999999998655433
No 110
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.86 E-value=1.5e-20 Score=218.49 Aligned_cols=182 Identities=16% Similarity=0.256 Sum_probs=162.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|++++|++++.||.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++++.||.|++||+.++......+.+|
T Consensus 62 ~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 139 (814)
T 3mkq_A 62 KFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGH 139 (814)
T ss_dssp EEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSS-EEEEEETTSEEEEEEGGGTSEEEEEEECC
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-CCCCEEEEEEeCCCC-EEEEEcCCCEEEEEECCCCceEEEEEcCC
Confidence 4899999999999999999999999999999886 778899999999998 79999999999999998875557788899
Q ss_pred CCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeEee--CCCCeEEEEEeC--CCCEEEEEEcCCeEEEEECCCCC
Q 006360 81 SAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCIT--YEAPFSSLAFID--DDWILTAGTSNGRVVFYDIRGKP 155 (648)
Q Consensus 81 ~~~V~slafsP-dg~~LaSgs~Dg~I~IWDl~tgk~v~~~~--h~~~I~slafsP--dG~~Lasgs~DG~V~IWDl~s~~ 155 (648)
...|.+++|+| ++.+|++++.|+.|++||+.+++....+. +...+.+++|+| ++.+|++++.||.|++||+++.
T Consensus 140 ~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~- 218 (814)
T 3mkq_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK- 218 (814)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT-
T ss_pred CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC-
Confidence 99999999999 89999999999999999999887665553 448899999999 9999999999999999999887
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEecc
Q 006360 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETT 187 (648)
Q Consensus 156 ~~~~~l~~~~h~~~VtsLafspdg~~Las~~~ 187 (648)
..+..+. +|...|.+++|+|+++++++++.
T Consensus 219 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 248 (814)
T 3mkq_A 219 SCVATLE--GHMSNVSFAVFHPTLPIIISGSE 248 (814)
T ss_dssp EEEEEEE--CCSSCEEEEEECSSSSEEEEEET
T ss_pred cEEEEEc--CCCCCEEEEEEcCCCCEEEEEeC
Confidence 3444444 78999999999999999998743
No 111
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.86 E-value=2.8e-21 Score=208.05 Aligned_cols=177 Identities=12% Similarity=0.133 Sum_probs=131.1
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee----------
Q 006360 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV---------- 74 (648)
Q Consensus 5 dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v---------- 74 (648)
|+++||+|+.|++|+|||+.++..+..+.. |...|.+++|+|++.++|++++.|++|++||+.++....
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~ 233 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYP-LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKN 233 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEE-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSC
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecC-CCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCccc
Confidence 789999999999999999988888777776 456778899999987789999999999999997664321
Q ss_pred --------------EEeccCCCCeEEEEEc-cCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCC----------------
Q 006360 75 --------------SWLKQHSAPTAGISFS-SDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYE---------------- 122 (648)
Q Consensus 75 --------------~~l~~H~~~V~slafs-Pdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~---------------- 122 (648)
....+|...|.++.|. +++++|++++.|+.+++||+..++....+ .+.
T Consensus 234 ~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 313 (393)
T 4gq1_A 234 PWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGIS 313 (393)
T ss_dssp CCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEEC
T ss_pred ceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccc
Confidence 1224677889999997 59999999999999999999876544332 121
Q ss_pred --CCeEEEEEeC--CCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006360 123 --APFSSLAFID--DDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 123 --~~I~slafsP--dG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~ 185 (648)
..+..+.|++ ++.++++|+.||.|+|||+..+... ..+. .|..+|.+|+|+|||++||++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~-~~~~--~~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 314 LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSN-SIPI--QLGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCC-EEEE--ECSSCEEEEEECTTSSEEEEE
T ss_pred ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEE-EEec--CCCCcEEEEEEcCCCCEEEEE
Confidence 1222334444 3456778889999999999987543 3333 578899999999998888776
No 112
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.86 E-value=6.6e-20 Score=187.45 Aligned_cols=199 Identities=15% Similarity=0.190 Sum_probs=160.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~-~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~ 79 (648)
+||+++ +|++| .|++|+|||+.+++++..+.. .|...|.+|+|+|+++ +|++|+.|++|+|||+.+++. +..+.+
T Consensus 32 ~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~-~l~sgs~Dg~v~iw~~~~~~~-~~~~~~ 107 (318)
T 4ggc_A 32 DWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQQKR-LRNMTS 107 (318)
T ss_dssp EECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-EEEEEC
T ss_pred EECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCC-EEEEEECCCcEEEeecCCcee-EEEecC
Confidence 478765 67665 599999999999999888764 3677899999999998 899999999999999998875 677889
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee-e-EeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCc
Q 006360 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS-S-CITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (648)
Q Consensus 80 H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v-~-~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~ 157 (648)
|...+.++.+ ++.++++++.++.+++|+....... . ...|...+.++.|.+++++|++++.||.|+|||+++.+..
T Consensus 108 h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 185 (318)
T 4ggc_A 108 HSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 185 (318)
T ss_dssp CSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred ccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence 9988877655 5789999999999999999876533 3 3368999999999999999999999999999999875432
Q ss_pred e-EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCc
Q 006360 158 L-TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (648)
Q Consensus 158 ~-~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ 214 (648)
. .......|.+.|.+++|.+++..++. +.+++.++.|++||.......
T Consensus 186 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~---------~~~~~~~~~i~lwd~~~~~~~ 234 (318)
T 4ggc_A 186 WVPLQTFTQHQGAVKAVAWCPWQSNVLA---------TGGGTSDRHIRIWNVCSGACL 234 (318)
T ss_dssp SCCSEEECCCCSCEEEEEECTTSTTEEE---------EEECTTTCEEEEEETTTCCEE
T ss_pred ccceeeecccCCceEEEEecCCCCcEEE---------EEecCCCCEEEEEeccccccc
Confidence 1 12233368889999999997554432 245667899999998765543
No 113
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=1.4e-20 Score=199.85 Aligned_cols=192 Identities=11% Similarity=0.116 Sum_probs=147.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+|||++|++|+.+| ++|||+.+++....... ..+..++|.++++.++++++.|++|+|||..+++. +..+ .|
T Consensus 26 ~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~-~~~~-~~ 99 (355)
T 3vu4_A 26 EFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM---RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD-VSRI-KV 99 (355)
T ss_dssp EECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC---SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEE-EEEE-EC
T ss_pred EECCCCCEEEEEcCCE-EEEEecCCcceeeeeec---CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcE-EEEE-EC
Confidence 5899999999988775 78999987776655442 13666888888885667788899999999988874 3444 36
Q ss_pred CCCeEEEEEccCC-----------------------------------CEEEE--EeCCCeEEEEeCCCCc---------
Q 006360 81 SAPTAGISFSSDD-----------------------------------KIIAS--VGLDKKLYTYDPGSRR--------- 114 (648)
Q Consensus 81 ~~~V~slafsPdg-----------------------------------~~LaS--gs~Dg~I~IWDl~tgk--------- 114 (648)
...|.+++|+++. .++++ ++.||.|++||+.+++
T Consensus 100 ~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~ 179 (355)
T 3vu4_A 100 DAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGV 179 (355)
T ss_dssp SSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-----------
T ss_pred CCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccc
Confidence 6688888887643 23444 5788899999998765
Q ss_pred --------eeeEeeCCCCeEEEEEeCCCCEEEEEEcCCe-EEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006360 115 --------PSSCITYEAPFSSLAFIDDDWILTAGTSNGR-VVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 115 --------~v~~~~h~~~I~slafsPdG~~Lasgs~DG~-V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~ 185 (648)
......|...|.+++|+|+|.+|++|+.||+ |+|||++++. .+..+....|...|.+++|+|++++|+++
T Consensus 180 ~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~-~~~~~~~g~h~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 180 QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV-LVREFRRGLDRADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp -------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC-EEEEEECTTCCSCEEEEEECTTSCEEEEE
T ss_pred cccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc-EEEEEEcCCCCCcEEEEEECCCCCEEEEE
Confidence 2333469999999999999999999999998 9999999874 34444322389999999999976665554
Q ss_pred ccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 186 TTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 186 ~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
+.|+.|++||+...
T Consensus 259 ------------s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 259 ------------SDKWTLHVFEIFND 272 (355)
T ss_dssp ------------ETTCEEEEEESSCC
T ss_pred ------------ECCCEEEEEEccCC
Confidence 66999999999754
No 114
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.86 E-value=2.4e-20 Score=202.53 Aligned_cols=188 Identities=16% Similarity=0.185 Sum_probs=161.2
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~ 81 (648)
+.++|++|++|+.||.|++||+.+++.+..+.+ |...|.+++|+ ++ +|++|+.||.|++||+.+++. +..+.+|.
T Consensus 125 ~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~--~~-~l~s~~~dg~i~vwd~~~~~~-~~~~~~h~ 199 (445)
T 2ovr_B 125 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG-HTGGVWSSQMR--DN-IIISGSTDRTLKVWNAETGEC-IHTLYGHT 199 (445)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTCCEEEECCC-CSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTTEE-EEEECCCS
T ss_pred EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcC-CCCCEEEEEec--CC-EEEEEeCCCeEEEEECCcCcE-EEEECCCC
Confidence 567899999999999999999999999999886 77788999997 33 899999999999999988874 67888999
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 006360 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (648)
Q Consensus 82 ~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~ 160 (648)
..|.+++|+ +.+|++++.|+.|++||+.+++.+..+ .|...|.++.| ++.+|++|+.||.|++||+++. .++..
T Consensus 200 ~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~-~~~~~ 274 (445)
T 2ovr_B 200 STVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE-TCLHT 274 (445)
T ss_dssp SCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT-EEEEE
T ss_pred CcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC-cEeEE
Confidence 999999995 678999999999999999999888776 58899999999 7889999999999999999887 33444
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcc
Q 006360 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (648)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~s 215 (648)
+. +|...|.+++| ++. ++++++.|+.|++||++......
T Consensus 275 ~~--~~~~~v~~~~~--~~~------------~l~~~~~d~~i~i~d~~~~~~~~ 313 (445)
T 2ovr_B 275 LQ--GHTNRVYSLQF--DGI------------HVVSGSLDTSIRVWDVETGNCIH 313 (445)
T ss_dssp EC--CCSSCEEEEEE--CSS------------EEEEEETTSCEEEEETTTCCEEE
T ss_pred ec--CCCCceEEEEE--CCC------------EEEEEeCCCeEEEEECCCCCEEE
Confidence 44 78999999998 333 45556779999999998655443
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.86 E-value=5.2e-21 Score=214.55 Aligned_cols=187 Identities=11% Similarity=0.054 Sum_probs=145.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-----------------------------eeEEEeCCCCCcEEEEEEccCCCe
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGA-----------------------------KAAELKDPNEQVLRVLDYSRNSRH 51 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~-----------------------------~i~~l~~~~~~~V~~Vafspdg~~ 51 (648)
+|+|||+++|+++.|++|+ |...++ ....+...+...|.+++|+|+|.
T Consensus 22 ~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~- 98 (588)
T 2j04_A 22 TWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDD- 98 (588)
T ss_dssp EECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSS-
T ss_pred EECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCC-
Confidence 5899999999999999995 433322 11122213467899999999998
Q ss_pred EEEEEeCCCeEEEEECCCCCceeEEeccCCC-----CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCce-------eeEe
Q 006360 52 LLVTAGDDGTLHLWDTTGRSPKVSWLKQHSA-----PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP-------SSCI 119 (648)
Q Consensus 52 lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~-----~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~-------v~~~ 119 (648)
+|++++.||.|+|||..+ .+..+. |.. .|.+++|+|||++|++|+.||+|+|||+.+++. +..+
T Consensus 99 ~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti 174 (588)
T 2j04_A 99 WMAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSI 174 (588)
T ss_dssp CEEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEE
T ss_pred EEEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeee
Confidence 899999999999999655 355566 665 499999999999999999999999999998863 3443
Q ss_pred -----eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCC--ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCe
Q 006360 120 -----TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ--PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAET 192 (648)
Q Consensus 120 -----~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~--~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~ 192 (648)
+|..+|.+++|+||| +++++.|+.|++||+.+... ....+. .+|...|.+++|+ |.+++++
T Consensus 175 ~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~-~~h~~~V~svaFs--g~~LASa------- 242 (588)
T 2j04_A 175 RLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ-NASRRKITDLKIV--DYKVVLT------- 242 (588)
T ss_dssp ECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE-CCCSSCCCCEEEE--TTEEEEE-------
T ss_pred ecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec-ccccCcEEEEEEE--CCEEEEE-------
Confidence 366799999999999 88899999999999988753 123342 2688999999998 4454443
Q ss_pred EEEEeeCCCeEEcCCCCCCC
Q 006360 193 ALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 193 ~lvs~s~D~~IkvWDlr~~~ 212 (648)
+ ++.|++||+....
T Consensus 243 -----~-~~tIkLWd~~~~~ 256 (588)
T 2j04_A 243 -----C-PGYVHKIDLKNYS 256 (588)
T ss_dssp -----C-SSEEEEEETTTTE
T ss_pred -----e-CCeEEEEECCCCe
Confidence 3 6899999987543
No 116
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=4.5e-20 Score=195.84 Aligned_cols=195 Identities=11% Similarity=0.105 Sum_probs=145.5
Q ss_pred ccCCCCEE-EEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCC------------------------------
Q 006360 2 YNCKDEHL-ASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSR------------------------------ 50 (648)
Q Consensus 2 FSpdG~~L-asgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~------------------------------ 50 (648)
|.++++.+ ++++.|+.|+|||+.+++.+..+. +...|.+++|+++.-
T Consensus 66 ~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~--~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~ 143 (355)
T 3vu4_A 66 MLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK--VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVC 143 (355)
T ss_dssp ECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE--CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEE
T ss_pred EcCCCCEEEEEECCccEEEEEECCCCcEEEEEE--CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceE
Confidence 45667766 567788999999999999988887 445777788876420
Q ss_pred ----eEEEE--EeCCCeEEEEECCCCC---------------ceeEEeccCCCCeEEEEEccCCCEEEEEeCCCe-EEEE
Q 006360 51 ----HLLVT--AGDDGTLHLWDTTGRS---------------PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKK-LYTY 108 (648)
Q Consensus 51 ----~lLaS--gs~Dg~V~IWDl~t~~---------------~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~-I~IW 108 (648)
.+++. |+.||.|++||+.+.. +.+..+.+|...|++++|+|++++|++|+.|++ |++|
T Consensus 144 ~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 144 EFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVF 223 (355)
T ss_dssp EEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEE
T ss_pred EEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 12333 5678889999987643 015678899999999999999999999999998 9999
Q ss_pred eCCCCceeeEee---CCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCc-eEEEe------------------e-cC
Q 006360 109 DPGSRRPSSCIT---YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP-LTVLR------------------A-CS 165 (648)
Q Consensus 109 Dl~tgk~v~~~~---h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~-~~~l~------------------~-~~ 165 (648)
|+++++++..+. |...|.+++|+|+|++|++++.|+.|+|||++..... ...+. . ..
T Consensus 224 d~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (355)
T 3vu4_A 224 KTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVD 303 (355)
T ss_dssp ETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCC
T ss_pred ECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccC
Confidence 999999988885 8999999999999999999999999999999764211 11110 0 01
Q ss_pred CCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 166 SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 166 h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
+......++|++++++ ++.++.|+.+++|++..
T Consensus 304 ~~~~~~~~a~~~d~~~------------l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 304 KHVRGCKIAWISESSL------------VVVWPHTRMIETFKVVF 336 (355)
T ss_dssp TTCCCCEEEESSSSEE------------EEEETTTTEEEEEEEEE
T ss_pred CCCCceEEEEeCCCCE------------EEEEeCCCeEEEEEEEc
Confidence 1222355677775444 44455688888887754
No 117
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.2e-20 Score=225.40 Aligned_cols=208 Identities=15% Similarity=0.155 Sum_probs=157.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCcee----EEEe------CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKA----AELK------DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR 70 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i----~~l~------~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~ 70 (648)
+|+|++++|++|+.|++|++||+.++... ..+. ..|...|.+|+|+|+++ +||+|+.||+|+|||+.+.
T Consensus 442 ~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~-~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 442 LPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETL-ELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp CCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTT-EEEEEETTSCEEEEEEEEC
T ss_pred cccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCC-eEEEEecCcEEEEEEecCc
Confidence 58899999999999999999999877431 1111 14677899999999999 8999999999999999655
Q ss_pred C--------------------------------------------ceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEE
Q 006360 71 S--------------------------------------------PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLY 106 (648)
Q Consensus 71 ~--------------------------------------------~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~ 106 (648)
+ ..+..+.+|.+.|++|+|+||| +|++|+.|++|+
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~ 599 (902)
T 2oaj_A 521 QFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLM 599 (902)
T ss_dssp CC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEE
T ss_pred cccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEE
Confidence 2 1246678899999999999999 999999999999
Q ss_pred EEeCCCCceeeE-----e--eCCCCeEEEEEe-----CCC---CEEEEEEcCCeEEEEEC---CCCCCceEEEeec---C
Q 006360 107 TYDPGSRRPSSC-----I--TYEAPFSSLAFI-----DDD---WILTAGTSNGRVVFYDI---RGKPQPLTVLRAC---S 165 (648)
Q Consensus 107 IWDl~tgk~v~~-----~--~h~~~I~slafs-----PdG---~~Lasgs~DG~V~IWDl---~s~~~~~~~l~~~---~ 165 (648)
+||++++..+.. + +|...|++++|+ ||| .+|++|+.|++|++||+ .++. ....+..+ .
T Consensus 600 lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~-~~~~~~~~~~~~ 678 (902)
T 2oaj_A 600 LIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGK-FDVQLMDITNVT 678 (902)
T ss_dssp EEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGC-EEEEEEEEEECC
T ss_pred EEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCc-EEEEecCceecC
Confidence 999988766531 2 578889999999 885 89999999999999999 5543 33333322 3
Q ss_pred CCCCeeEEE-EccCCCeEEEe----------ccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 166 SSEAVSSLC-WQRAKPVFIDE----------TTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 166 h~~~VtsLa-fspdg~~Las~----------~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
|.++|.+++ |+.+....+.. +...++.++++ + +..|++|++....+
T Consensus 679 ~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~-~-~~~ir~~~~~~~k~ 735 (902)
T 2oaj_A 679 SKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLIT-G-FDDIRLITLGKSKS 735 (902)
T ss_dssp SSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEE-C-SSEEEEECTTCCCE
T ss_pred CCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEE-e-ccceEEEeCccccc
Confidence 467888887 76332221111 11123334443 3 88999999976444
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.84 E-value=1.6e-19 Score=191.23 Aligned_cols=196 Identities=14% Similarity=0.112 Sum_probs=158.2
Q ss_pred CccCCCCEE-EEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006360 1 MYNCKDEHL-ASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (648)
Q Consensus 1 AFSpdG~~L-asgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~ 79 (648)
+|+|+|++| ++++.|+.|++||+.+++.+..+..+ ..+.+++|+|+++.+++++..|+.|++||+.+++. +..+.
T Consensus 38 ~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~--~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~-~~~~~- 113 (391)
T 1l0q_A 38 VISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG--SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV-AGTVK- 113 (391)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEE-
T ss_pred EECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC--CCccceEECCCCCEEEEEECCCCEEEEEECCCCeE-EEEEe-
Confidence 489999977 56668999999999999998888753 37899999999996667777889999999998874 34444
Q ss_pred CCCCeEEEEEccCCCEE-EEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEE-EEEEcCCeEEEEECCCCCCc
Q 006360 80 HSAPTAGISFSSDDKII-ASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWIL-TAGTSNGRVVFYDIRGKPQP 157 (648)
Q Consensus 80 H~~~V~slafsPdg~~L-aSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~L-asgs~DG~V~IWDl~s~~~~ 157 (648)
+...+.+++|+|++++| ++++.|+.|++||+.+++.+..+.....+.+++|+|++++| +++..|+.|++||+++. ..
T Consensus 114 ~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~-~~ 192 (391)
T 1l0q_A 114 TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN-SV 192 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-EE
T ss_pred CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-eE
Confidence 44568999999999977 68888999999999999988888777888999999999888 56678899999999987 33
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 158 ~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
...+ .+...+.+++|+|+++++++++. ...++.|++||+.....
T Consensus 193 ~~~~---~~~~~~~~~~~~~~g~~l~~~~~---------~~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 193 IDTV---KVEAAPSGIAVNPEGTKAYVTNV---------DKYFNTVSMIDTGTNKI 236 (391)
T ss_dssp EEEE---ECSSEEEEEEECTTSSEEEEEEE---------CSSCCEEEEEETTTTEE
T ss_pred EEEE---ecCCCccceEECCCCCEEEEEec---------CcCCCcEEEEECCCCeE
Confidence 3333 35678999999998777655421 01588999999875543
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.84 E-value=6.5e-20 Score=190.42 Aligned_cols=135 Identities=14% Similarity=0.254 Sum_probs=117.2
Q ss_pred EEECCCCceeEEEeCCCCCcEEEEEEccCC--CeEEEEEeCCCeEEEEECCC-CCceeEEeccCCCCeEEEEEccCCCEE
Q 006360 20 LHNLASGAKAAELKDPNEQVLRVLDYSRNS--RHLLVTAGDDGTLHLWDTTG-RSPKVSWLKQHSAPTAGISFSSDDKII 96 (648)
Q Consensus 20 IwDl~sg~~i~~l~~~~~~~V~~Vafspdg--~~lLaSgs~Dg~V~IWDl~t-~~~~v~~l~~H~~~V~slafsPdg~~L 96 (648)
.|+....+.+..+.+ |...|.+++|+|++ ..+|++|+.||.|+|||+.+ +......+.+|...|++++|+|++++|
T Consensus 23 ~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 101 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSS-PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKV 101 (368)
T ss_dssp CCSSCTTCCEECSSC-CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred cCCCCCcceeEeccC-CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEE
Confidence 344445555555554 78899999999995 34899999999999999987 444347788999999999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEE--eCCCCEEEEEEcCCeEEEEECCCCC
Q 006360 97 ASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAF--IDDDWILTAGTSNGRVVFYDIRGKP 155 (648)
Q Consensus 97 aSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slaf--sPdG~~Lasgs~DG~V~IWDl~s~~ 155 (648)
++++.|+.|++||+.+++.+....|...|.+++| ++++.+|++++.||.|++||+++..
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred EEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 9999999999999999998888899999999999 8899999999999999999998753
No 120
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.84 E-value=9e-20 Score=186.61 Aligned_cols=121 Identities=16% Similarity=0.256 Sum_probs=105.7
Q ss_pred CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC---ceeEEeccCCCCeEEEEEcc--CCCEEEEEeCCCeEEEE
Q 006360 34 DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---PKVSWLKQHSAPTAGISFSS--DDKIIASVGLDKKLYTY 108 (648)
Q Consensus 34 ~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~---~~v~~l~~H~~~V~slafsP--dg~~LaSgs~Dg~I~IW 108 (648)
..|...|++++|+|+++ +|++++.||.|+|||+.+.. .....+.+|...|.+++|+| ++.+|++++.|+.|++|
T Consensus 8 ~gH~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGR-HVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp CCCSSCEEEEEECSSSS-EEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred cccccceeEEEEcCCCC-EEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 34788999999999998 89999999999999998654 23556788999999999999 69999999999999999
Q ss_pred eCCCC---------ceeeEe-eCCCCeEEEEEeCC--CCEEEEEEcCCeEEEEECCCCC
Q 006360 109 DPGSR---------RPSSCI-TYEAPFSSLAFIDD--DWILTAGTSNGRVVFYDIRGKP 155 (648)
Q Consensus 109 Dl~tg---------k~v~~~-~h~~~I~slafsPd--G~~Lasgs~DG~V~IWDl~s~~ 155 (648)
|++.+ +.+..+ .|...|.+++|+|+ +.+|++++.||.|++||+++..
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 99886 334444 58899999999999 9999999999999999998653
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.84 E-value=7.3e-20 Score=196.68 Aligned_cols=205 Identities=11% Similarity=0.069 Sum_probs=167.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+++++++++++.|+.|++||+.+++.+..+.. +...+.+++|+++++.++++++.|+.|++||+.+++. +..+..
T Consensus 176 ~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~- 252 (433)
T 3bws_A 176 SIPEHNELWVSQMQANAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE-IRKTDK- 252 (433)
T ss_dssp EEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE-EEECCC-
T ss_pred EEcCCCEEEEEECCCCEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE-EEEecC-
Confidence 4678999999999999999999999999888875 6778899999999996666777899999999988764 444444
Q ss_pred CCCeEEEEEccCCCEEEEEe--------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEE-EEEEcCCeEEEEEC
Q 006360 81 SAPTAGISFSSDDKIIASVG--------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWIL-TAGTSNGRVVFYDI 151 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs--------~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~L-asgs~DG~V~IWDl 151 (648)
...+.+++|+|++++|++++ .|+.|++||+.+++.+..+.+...+.+++|+|+++.+ ++++.|+.|++||+
T Consensus 253 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 253 IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEET
T ss_pred CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEEC
Confidence 44599999999999999988 5889999999999988888777899999999999755 56688999999999
Q ss_pred CCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCC---CeEEEEeeCCCeEEcCCCCCCC
Q 006360 152 RGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKA---ETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 152 ~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~---~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
.+. +....+ .+...+.+++|+|+|++++++....+ ..+++++..|+.|++||+....
T Consensus 333 ~~~-~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 333 KEK-KVQKSI---PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp TTT-EEEEEE---ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred CCC-cEEEEe---cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 976 333333 36788999999999998877644322 3455667778999999986543
No 122
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.84 E-value=5.5e-20 Score=196.28 Aligned_cols=152 Identities=9% Similarity=0.070 Sum_probs=129.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEE-EeCCCCCcEEEEEEccCCCeEEEEEeCCC----eEEEEECCCCCce--
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDG----TLHLWDTTGRSPK-- 73 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~-l~~~~~~~V~~Vafspdg~~lLaSgs~Dg----~V~IWDl~t~~~~-- 73 (648)
+|+|||++|++++.+ .+++|+..+++.+.. ....|...|.+++|+|+++ ++++++.|+ .+++||+......
T Consensus 183 ~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~ 260 (365)
T 4h5i_A 183 HFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVL 260 (365)
T ss_dssp EECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEE
T ss_pred EEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccccceecce
Confidence 589999999999755 577777777776654 3345778899999999998 788887776 6888998665422
Q ss_pred -eEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEE
Q 006360 74 -VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYD 150 (648)
Q Consensus 74 -v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~--~h~~~I~slafsPdG~~Lasgs~DG~V~IWD 150 (648)
...+.+|...|++++|+||+++|++|+.|+.|+|||+++++++..+ .|...|++++|+|||++|++|+.|++|+|||
T Consensus 261 ~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 261 RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 3456789999999999999999999999999999999999988765 5999999999999999999999999999999
Q ss_pred CCCC
Q 006360 151 IRGK 154 (648)
Q Consensus 151 l~s~ 154 (648)
+...
T Consensus 341 ip~~ 344 (365)
T 4h5i_A 341 LPLN 344 (365)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 9754
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.84 E-value=4.6e-19 Score=187.76 Aligned_cols=197 Identities=13% Similarity=0.092 Sum_probs=158.9
Q ss_pred CccCCCCEEEEEE-CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006360 1 MYNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (648)
Q Consensus 1 AFSpdG~~Lasgs-~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~ 79 (648)
+|+|++++|++++ .++.|++||+.+++.+..+.. ...+.+++|+++++.++++++.|+.|++||+.+++. +..+..
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~ 156 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV-INTVSV 156 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEEC
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE-EEEEec
Confidence 4899999886554 679999999999998888774 346788999999996668888999999999988764 444444
Q ss_pred CCCCeEEEEEccCCCEE-EEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEE---cCCeEEEEECCCCC
Q 006360 80 HSAPTAGISFSSDDKII-ASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT---SNGRVVFYDIRGKP 155 (648)
Q Consensus 80 H~~~V~slafsPdg~~L-aSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs---~DG~V~IWDl~s~~ 155 (648)
| ..+.+++|+|++++| ++++.|+.|++||+++++.+..+.+...+.+++|+|+|++|++++ .++.|++||+.+.
T Consensus 157 ~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~- 234 (391)
T 1l0q_A 157 G-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN- 234 (391)
T ss_dssp C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT-
T ss_pred C-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC-
Confidence 4 457999999999887 677889999999999999888888888999999999999999888 6899999999987
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCccc
Q 006360 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (648)
Q Consensus 156 ~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss 216 (648)
+.+..+. . ...+.+++|+|+++++ +++++.|+.|++||+........
T Consensus 235 ~~~~~~~--~-~~~~~~~~~s~dg~~l-----------~~s~~~d~~v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 235 KITARIP--V-GPDPAGIAVTPDGKKV-----------YVALSFXNTVSVIDTATNTITAT 281 (391)
T ss_dssp EEEEEEE--C-CSSEEEEEECTTSSEE-----------EEEETTTTEEEEEETTTTEEEEE
T ss_pred eEEEEEe--c-CCCccEEEEccCCCEE-----------EEEcCCCCEEEEEECCCCcEEEE
Confidence 3344444 2 3458899999976654 34446689999999986544433
No 124
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.83 E-value=3.6e-19 Score=193.30 Aligned_cols=186 Identities=18% Similarity=0.273 Sum_probs=154.4
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCe
Q 006360 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPT 84 (648)
Q Consensus 5 dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V 84 (648)
++++|++|+.||.|++||+.+++.+..+.+ |...|.+++| +++ +|++++.|+.|++||+.+... +..+.+|...|
T Consensus 208 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~-~~~~v~~~~~--~~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~v 282 (445)
T 2ovr_B 208 HEKRVVSGSRDATLRVWDIETGQCLHVLMG-HVAAVRCVQY--DGR-RVVSGAYDFMVKVWDPETETC-LHTLQGHTNRV 282 (445)
T ss_dssp ETTEEEEEETTSEEEEEESSSCCEEEEEEC-CSSCEEEEEE--CSS-CEEEEETTSCEEEEEGGGTEE-EEEECCCSSCE
T ss_pred cCCEEEEEeCCCEEEEEECCCCcEEEEEcC-CcccEEEEEE--CCC-EEEEEcCCCEEEEEECCCCcE-eEEecCCCCce
Confidence 467899999999999999998988888876 6778888888 455 789999999999999988764 67788999999
Q ss_pred EEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEee
Q 006360 85 AGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRA 163 (648)
Q Consensus 85 ~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~ 163 (648)
.+++| ++.+|++++.|+.|++||+++++++..+ .|...+.++.++ +++|++|+.||.|++||+++.. .+..+..
T Consensus 283 ~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~ 357 (445)
T 2ovr_B 283 YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQ-CLQTLQG 357 (445)
T ss_dssp EEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCC-EEEEECS
T ss_pred EEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCc-EEEEEcc
Confidence 99999 7899999999999999999999988776 578888888874 6699999999999999998873 4444442
Q ss_pred c-CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCc
Q 006360 164 C-SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (648)
Q Consensus 164 ~-~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ 214 (648)
. .|...|++++|++ .++++++.|+.|++||+......
T Consensus 358 ~~~~~~~v~~~~~~~--------------~~l~s~~~dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 358 PNKHQSAVTCLQFNK--------------NFVITSSDDGTVKLWDLKTGEFI 395 (445)
T ss_dssp TTSCSSCEEEEEECS--------------SEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCCCCEEEEEECC--------------CEEEEEeCCCeEEEEECCCCcee
Confidence 2 3889999999953 25666678999999999765543
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.82 E-value=2.5e-19 Score=192.44 Aligned_cols=195 Identities=8% Similarity=0.048 Sum_probs=159.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeC----CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD----PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~----~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~ 76 (648)
+|+|++.++++++.++.|++||+.+++.+..+.. .|...|.+++|++++. ++++++.|+.|++||+.+.+. +..
T Consensus 129 ~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~~~~-~~~ 206 (433)
T 3bws_A 129 RFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNE-LWVSQMQANAVHVFDLKTLAY-KAT 206 (433)
T ss_dssp EESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTTCCE-EEE
T ss_pred EEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCE-EEEEECCCCEEEEEECCCceE-EEE
Confidence 4788777788888889999999999988764321 3667899999999887 899999999999999988774 566
Q ss_pred eccCCCCeEEEEEccCCCEEEE-EeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEE--------cCCeEE
Q 006360 77 LKQHSAPTAGISFSSDDKIIAS-VGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT--------SNGRVV 147 (648)
Q Consensus 77 l~~H~~~V~slafsPdg~~LaS-gs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs--------~DG~V~ 147 (648)
+..|...+.+++|+|+++++++ ++.|+.|++||+++++.+..+.....+.+++|+|+|++|++++ .||.|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~ 286 (433)
T 3bws_A 207 VDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLG 286 (433)
T ss_dssp EECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEE
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEE
Confidence 7788999999999999988854 4579999999999999888887777899999999999999888 488999
Q ss_pred EEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCC
Q 006360 148 FYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 148 IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
+||+++.+ ....+ .|...+.+++|+|+++++ ++++..|+.|++||+....
T Consensus 287 ~~d~~~~~-~~~~~---~~~~~~~~~~~~~~g~~l-----------~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 287 IYSMDKEK-LIDTI---GPPGNKRHIVSGNTENKI-----------YVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp EEETTTTE-EEEEE---EEEECEEEEEECSSTTEE-----------EEEETTTTEEEEEETTTTE
T ss_pred EEECCCCc-EEeec---cCCCCcceEEECCCCCEE-----------EEEecCCCEEEEEECCCCc
Confidence 99999772 23332 455688999999976543 4445668999999987543
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.81 E-value=5e-19 Score=187.63 Aligned_cols=147 Identities=13% Similarity=0.128 Sum_probs=116.6
Q ss_pred ccC---CCCEEEEEECCCcEEEEECCCCceeEEEeCCCC--CcEEEEEEccCCCeE-----------EEEEeCCCeEEEE
Q 006360 2 YNC---KDEHLASISLSGDLILHNLASGAKAAELKDPNE--QVLRVLDYSRNSRHL-----------LVTAGDDGTLHLW 65 (648)
Q Consensus 2 FSp---dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~--~~V~~Vafspdg~~l-----------LaSgs~Dg~V~IW 65 (648)
|++ ++++|++++.|++|+|||+++|+++.++.+++. ..+.+++|+|++..+ +++|+.|++|++|
T Consensus 186 fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 186 FAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp EEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred eeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 555 668899999999999999999999999986543 367778999999733 3678899999999
Q ss_pred ECCCCCceeEEe-----ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCe-EEEEEeCCCCEEE
Q 006360 66 DTTGRSPKVSWL-----KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPF-SSLAFIDDDWILT 138 (648)
Q Consensus 66 Dl~t~~~~v~~l-----~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~-h~~~I-~slafsPdG~~La 138 (648)
|..+++. +..+ .+|...+.+.+++ +.++++++.|++|+|||+.+++++..+. |...+ .+++|+|||++|+
T Consensus 266 d~~tgk~-l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La 342 (356)
T 2w18_A 266 NPKTTLS-VGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL 342 (356)
T ss_dssp ETTTTEE-EEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE
T ss_pred ECCCCEE-EEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE
Confidence 9988864 2322 4676666555554 8899999999999999999999998884 66554 4689999999999
Q ss_pred EEEcCCeEEEEEC
Q 006360 139 AGTSNGRVVFYDI 151 (648)
Q Consensus 139 sgs~DG~V~IWDl 151 (648)
+|+.|++|+|||+
T Consensus 343 SGS~D~TIklWd~ 355 (356)
T 2w18_A 343 AGQKDGNIFVYHY 355 (356)
T ss_dssp EECTTSCEEEEEE
T ss_pred EEECCCcEEEecC
Confidence 9999999999996
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.80 E-value=5.3e-18 Score=184.35 Aligned_cols=191 Identities=13% Similarity=0.141 Sum_probs=150.0
Q ss_pred CccCCCCEEEEEECCC---cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCe--EEEEECCCCCceeE
Q 006360 1 MYNCKDEHLASISLSG---DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT--LHLWDTTGRSPKVS 75 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG---~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~--V~IWDl~t~~~~v~ 75 (648)
+|+|||++|++++.++ .|++||+.+++... +.. +...+.+++|+|+++.++++++.|+. |++||+.++. ..
T Consensus 185 ~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~~-~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--~~ 260 (415)
T 2hqs_A 185 AWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VAS-FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--IR 260 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EEC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--EE
T ss_pred EEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-eec-CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--EE
Confidence 5899999999999875 99999999888754 444 55678899999999965557776655 9999998876 46
Q ss_pred EeccCCCCeEEEEEccCCCEEEEEeCC-C--eEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcC---CeEEEE
Q 006360 76 WLKQHSAPTAGISFSSDDKIIASVGLD-K--KLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSN---GRVVFY 149 (648)
Q Consensus 76 ~l~~H~~~V~slafsPdg~~LaSgs~D-g--~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~D---G~V~IW 149 (648)
.+..|...+.+++|+||+++|++++.+ + .|++||+.+++......+...+.+++|+|||++|++++.+ +.|++|
T Consensus 261 ~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 261 QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEE
T ss_pred eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEE
Confidence 778888999999999999999988864 4 7888899988765555567789999999999999988864 589999
Q ss_pred ECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 150 Dl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
|+.+... ..+. .+. .+.+++|+|+|++|++++...+ ...|++||+.
T Consensus 341 d~~~~~~--~~l~--~~~-~~~~~~~spdg~~l~~~s~~~~---------~~~l~~~d~~ 386 (415)
T 2hqs_A 341 DLATGGV--QVLS--STF-LDETPSLAPNGTMVIYSSSQGM---------GSVLNLVSTD 386 (415)
T ss_dssp ETTTCCE--EECC--CSS-SCEEEEECTTSSEEEEEEEETT---------EEEEEEEETT
T ss_pred ECCCCCE--EEec--CCC-CcCCeEEcCCCCEEEEEEcCCC---------ccEEEEEECC
Confidence 9998742 3333 343 8999999999887766522110 1168888874
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=1.3e-18 Score=190.79 Aligned_cols=202 Identities=14% Similarity=0.093 Sum_probs=146.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCC----------ceeEEE----eCCCCCcEEEEEEccCCCeEEE----EEeCCCeE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASG----------AKAAEL----KDPNEQVLRVLDYSRNSRHLLV----TAGDDGTL 62 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg----------~~i~~l----~~~~~~~V~~Vafspdg~~lLa----Sgs~Dg~V 62 (648)
|+++++.+|++++.++ |+||+.... ..+... ...+...|.+++|+++++ +|+ +++.|+.|
T Consensus 43 avs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~lav~~~sgs~d~~v 120 (434)
T 2oit_A 43 AVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL-TLSACMMSSEYGSII 120 (434)
T ss_dssp EEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC-EEEEEEEETTTEEEE
T ss_pred EEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC-EEEEEEeccCCCceE
Confidence 4678889999998887 889875311 011111 112456799999999998 566 78889999
Q ss_pred EEEECCCC-----Cc-----eeEEeccCCCCeEEEEEccC-CCEEEEEeCCCeEEEEeCCCCceee-EeeCCCCeEEEEE
Q 006360 63 HLWDTTGR-----SP-----KVSWLKQHSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSS-CITYEAPFSSLAF 130 (648)
Q Consensus 63 ~IWDl~t~-----~~-----~v~~l~~H~~~V~slafsPd-g~~LaSgs~Dg~I~IWDl~tgk~v~-~~~h~~~I~slaf 130 (648)
+|||+.+. .. .+..+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+. ...|...|.+++|
T Consensus 121 ~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~w 200 (434)
T 2oit_A 121 AFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCW 200 (434)
T ss_dssp EEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEE
T ss_pred EEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEE
Confidence 99998543 11 14556779999999999996 8999999999999999999886553 3357889999999
Q ss_pred eCCCCEEEEEEcCCeEEEEECCCCCCceEEEeec-----CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEc
Q 006360 131 IDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRAC-----SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILM 205 (648)
Q Consensus 131 sPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~-----~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~Ikv 205 (648)
+|+|++|++|+.||.|++||++. .....+..+ .|...|.+++|++++.++++.....+. + .....+++
T Consensus 201 spdg~~lasgs~dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~-~----~~~~~v~i 273 (434)
T 2oit_A 201 SPKGKQLAVGKQNGTVVQYLPTL--QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGT-L----ETSPDVVM 273 (434)
T ss_dssp CTTSSCEEEEETTSCEEEECTTC--CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCC-S----SSCCEEEE
T ss_pred cCCCCEEEEEcCCCcEEEEccCC--cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCc-c----CCCCceEE
Confidence 99999999999999999999983 223333322 123489999999977766553111000 0 01134889
Q ss_pred CCCCCC
Q 006360 206 PDPLPS 211 (648)
Q Consensus 206 WDlr~~ 211 (648)
||++..
T Consensus 274 ~~l~~~ 279 (434)
T 2oit_A 274 ALLPKK 279 (434)
T ss_dssp EECCCT
T ss_pred EEeccC
Confidence 998754
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=3e-17 Score=164.36 Aligned_cols=203 Identities=12% Similarity=0.010 Sum_probs=144.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCC-CceeEEEeCCCCCcEEEEEEccCCCeEEEEEe--CCCeEE--EEECCCCCceeE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLAS-GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG--DDGTLH--LWDTTGRSPKVS 75 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~s-g~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs--~Dg~V~--IWDl~t~~~~v~ 75 (648)
+|+|||++|++++ ++.|++||+.+ ++....+..++...+.+++|+|+++ +|++++ .++.+. +||..+.. ..
T Consensus 48 ~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~l~~~~~~~~~--~~ 123 (297)
T 2ojh_A 48 NWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA-LYAISDKVEFGKSAIYLLPSTGGT--PR 123 (297)
T ss_dssp EECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS-EEEEEECTTTSSCEEEEEETTCCC--CE
T ss_pred EECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCC-EEEEEEeCCCCcceEEEEECCCCc--eE
Confidence 4899999999886 78999999988 7776656554457788899999998 666666 334444 45555554 34
Q ss_pred EeccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEeC--CCCceeeEeeCCCCeEEEEEeCCCCEEEEEE-cCCeEEEEEC
Q 006360 76 WLKQHSAPTAGISFSSDDKIIA-SVGLDKKLYTYDP--GSRRPSSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDI 151 (648)
Q Consensus 76 ~l~~H~~~V~slafsPdg~~La-Sgs~Dg~I~IWDl--~tgk~v~~~~h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl 151 (648)
.+..+. .+.+++|+|++++|+ ++..|+.++||++ .+++......+...+.+++|+|+|++|++++ .++.+.||++
T Consensus 124 ~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~ 202 (297)
T 2ojh_A 124 LMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRV 202 (297)
T ss_dssp ECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEE
Confidence 444444 489999999999877 7888998888885 4555555556788999999999999888776 5889999988
Q ss_pred CCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 152 RGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 152 ~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
.........+. .|...+.+++|+|+|++|++.+....... .....+..|++||+...
T Consensus 203 ~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~~-~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 203 RVDGSSVERIT--DSAYGDWFPHPSPSGDKVVFVSYDADVFD-HPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp ETTSSCEEECC--CCSEEEEEEEECTTSSEEEEEEEETTCCS-CCSSEEEEEEEEETTSC
T ss_pred CCCCCCcEEEe--cCCcccCCeEECCCCCEEEEEEcCCCCCc-ccccCceEEEEEecCCC
Confidence 74333344444 57778999999999888776632111000 00001356888887643
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.75 E-value=1e-16 Score=174.16 Aligned_cols=188 Identities=13% Similarity=0.095 Sum_probs=146.5
Q ss_pred CCEEEEEECC------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC---eEEEEECCCCCceeEE
Q 006360 6 DEHLASISLS------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG---TLHLWDTTGRSPKVSW 76 (648)
Q Consensus 6 G~~Lasgs~D------G~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg---~V~IWDl~t~~~~v~~ 76 (648)
+..|+.++.+ +.|++||+. +.....+.. |...+.+++|+|+++ .|+.++.++ .|++||+.+++. ..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~-~~~~v~~~~~Spdg~-~la~~s~~~~~~~i~~~d~~tg~~--~~ 217 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHR-SPQPLMSPAWSPDGS-KLAYVTFESGRSALVIQTLANGAV--RQ 217 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEE-ESSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTTCCE--EE
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeC-CCCcceeeEEcCCCC-EEEEEEecCCCcEEEEEECCCCcE--EE
Confidence 6677776654 799999986 555666665 567889999999998 677777765 999999998874 45
Q ss_pred eccCCCCeEEEEEccCCCEEE-EEeCCC--eEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEc-CC--eEEEEE
Q 006360 77 LKQHSAPTAGISFSSDDKIIA-SVGLDK--KLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTS-NG--RVVFYD 150 (648)
Q Consensus 77 l~~H~~~V~slafsPdg~~La-Sgs~Dg--~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~-DG--~V~IWD 150 (648)
+..|...+.+++|+||+++|+ +++.|+ .|++||+.+++......+...+.+++|+|||++|++++. ++ .|++||
T Consensus 218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 677888999999999999887 666665 499999999888666678889999999999999998886 44 688889
Q ss_pred CCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 151 IRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 151 l~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
+.+.. ...+. .+...+.+++|+|+|++|++.+.. ..+..|++||+...
T Consensus 298 ~~~~~--~~~l~--~~~~~~~~~~~spdG~~l~~~~~~---------~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 298 INGGA--PQRIT--WEGSQNQDADVSSDGKFMVMVSSN---------GGQQHIAKQDLATG 345 (415)
T ss_dssp TTSSC--CEECC--CSSSEEEEEEECTTSSEEEEEEEC---------SSCEEEEEEETTTC
T ss_pred CCCCC--EEEEe--cCCCcccCeEECCCCCEEEEEECc---------CCceEEEEEECCCC
Confidence 88763 23333 466789999999999888776321 11457888888643
No 131
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.73 E-value=6.8e-17 Score=177.15 Aligned_cols=203 Identities=12% Similarity=0.142 Sum_probs=146.3
Q ss_pred CccCCCCEEE----EEECCCcEEEEECCCC--------cee---EEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEE
Q 006360 1 MYNCKDEHLA----SISLSGDLILHNLASG--------AKA---AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLW 65 (648)
Q Consensus 1 AFSpdG~~La----sgs~DG~V~IwDl~sg--------~~i---~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IW 65 (648)
+|+|+|++|+ +++.|+.|+|||+.++ +.+ ..+. .|...|.+++|+|+..++|++++.||+|+||
T Consensus 99 ~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 99 ALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLK-DAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp EECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCC-SGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred EEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccC-CCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 5899999999 7888999999998654 222 2233 3678899999999855599999999999999
Q ss_pred ECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee-C-------CCCeEEEEEeCCCCEE
Q 006360 66 DTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-Y-------EAPFSSLAFIDDDWIL 137 (648)
Q Consensus 66 Dl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~-h-------~~~I~slafsPdG~~L 137 (648)
|++++.. +....+|...|++++|+|++++|++|+.||.|++||++ ++....+. + ...|.+++|++++.++
T Consensus 178 D~~~~~~-~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 178 QVTETVK-VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EESSSEE-EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred EcCCCcc-eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEE
Confidence 9988753 44556788999999999999999999999999999998 55444432 1 2378999999988777
Q ss_pred EE-EEcCC------eEEEEECCCCCC--ceEEEeec-------CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCC
Q 006360 138 TA-GTSNG------RVVFYDIRGKPQ--PLTVLRAC-------SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD 201 (648)
Q Consensus 138 as-gs~DG------~V~IWDl~s~~~--~~~~l~~~-------~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~ 201 (648)
++ ...|| .+++||++..+. +....+.. +...+...+.+-++.+++++++......-++....|+
T Consensus 256 ~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~~~ 335 (434)
T 2oit_A 256 IVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQ 335 (434)
T ss_dssp EEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECTTS
T ss_pred EEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecCCC
Confidence 54 33443 399999986531 22222211 2223333445557777777776666767777666554
Q ss_pred -eEEcC
Q 006360 202 -SILMP 206 (648)
Q Consensus 202 -~IkvW 206 (648)
.+.+|
T Consensus 336 ~~~~~~ 341 (434)
T 2oit_A 336 INWESW 341 (434)
T ss_dssp SCEEEE
T ss_pred CccEEE
Confidence 34444
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.71 E-value=1.6e-15 Score=156.71 Aligned_cols=200 Identities=13% Similarity=0.081 Sum_probs=148.4
Q ss_pred CccCCCCE-EEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006360 1 MYNCKDEH-LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (648)
Q Consensus 1 AFSpdG~~-Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~ 79 (648)
+|..++++ +++...++.|++||+.+++.+..+.. +...+ .++|+|+++.+++++..++.|++||+.++......+..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITL-GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEEC-CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEc-cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 36677665 56777889999999999999888775 34455 89999999965666666899999999888753455666
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCC---eEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEE-EcCCe-EEEEECCCC
Q 006360 80 HSAPTAGISFSSDDKIIASVGLDK---KLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAG-TSNGR-VVFYDIRGK 154 (648)
Q Consensus 80 H~~~V~slafsPdg~~LaSgs~Dg---~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasg-s~DG~-V~IWDl~s~ 154 (648)
+...+.+++|+|++++|+++..++ .|++||+.+++.+..+.....+.+++|+|||++|+++ ..++. |.+|++...
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 666666699999999999555553 8999999999988888777788999999999866555 55588 999999865
Q ss_pred CCceEE-EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 155 PQPLTV-LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 155 ~~~~~~-l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
...... .........+.+++|+|+|++++. ++..++.|.+||+.....
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v-----------~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFV-----------ANLIGNSIGILETQNPEN 210 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEE-----------EETTTTEEEEEECSSTTS
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEE-----------EeCCCCeEEEEECCCCcc
Confidence 332211 111234566899999998765433 334578999999875443
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.71 E-value=8e-16 Score=159.67 Aligned_cols=198 Identities=10% Similarity=0.071 Sum_probs=153.8
Q ss_pred CccCCCCEEEEEEC-------CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce
Q 006360 1 MYNCKDEHLASISL-------SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK 73 (648)
Q Consensus 1 AFSpdG~~Lasgs~-------DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~ 73 (648)
+|+|+|++|++++. ++.|.+||..+++.+..+.. ...+..++|+++++.++++...++.|.+||..+++.
T Consensus 47 ~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~- 123 (353)
T 3vgz_A 47 AYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEV- 123 (353)
T ss_dssp EEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCE-
T ss_pred EECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCee-
Confidence 47899998888774 56899999999998888774 233567899999997777777789999999988874
Q ss_pred eEEeccCCC---------CeEEEEEccCCCEEEEEe--CCCeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEE
Q 006360 74 VSWLKQHSA---------PTAGISFSSDDKIIASVG--LDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT 141 (648)
Q Consensus 74 v~~l~~H~~---------~V~slafsPdg~~LaSgs--~Dg~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs 141 (648)
+..+..+.. .+.+++|+|+++++++++ .++.|++||+.+++.+..+. +...+.+++|+|+|++|++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 203 (353)
T 3vgz_A 124 KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTN 203 (353)
T ss_dssp EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEEC
T ss_pred EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEc
Confidence 344444332 278999999999887776 47899999999999888876 666689999999999999999
Q ss_pred cCCeEEEEECCCCCCceEEEee--cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 142 SNGRVVFYDIRGKPQPLTVLRA--CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 142 ~DG~V~IWDl~s~~~~~~~l~~--~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
.++.|.+||+.+.+ ....+.. .++...+.+++|+|+|++++.. ...++.|.+||+.....
T Consensus 204 ~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-----------~~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 204 ADGELITIDTADNK-ILSRKKLLDDGKEHFFINISLDTARQRAFIT-----------DSKAAEVLVVDTRNGNI 265 (353)
T ss_dssp TTSEEEEEETTTTE-EEEEEECCCSSSCCCEEEEEEETTTTEEEEE-----------ESSSSEEEEEETTTCCE
T ss_pred CCCeEEEEECCCCe-EEEEEEcCCCCCCcccceEEECCCCCEEEEE-----------eCCCCEEEEEECCCCcE
Confidence 99999999999873 3333332 1245678899999987765443 34468899998865444
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.70 E-value=1.4e-16 Score=183.89 Aligned_cols=198 Identities=11% Similarity=0.081 Sum_probs=150.7
Q ss_pred CccCCCCEEEEEEC-CC-----cEEEEECCCCceeEEEeCCCC-----------------------CcEEEEEEccCCCe
Q 006360 1 MYNCKDEHLASISL-SG-----DLILHNLASGAKAAELKDPNE-----------------------QVLRVLDYSRNSRH 51 (648)
Q Consensus 1 AFSpdG~~Lasgs~-DG-----~V~IwDl~sg~~i~~l~~~~~-----------------------~~V~~Vafspdg~~ 51 (648)
+|+|||++|++++. |+ .|++||+.+++....+..+.. ..+..++|+|||+
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~- 121 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ- 121 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS-
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC-
Confidence 58999999999988 88 899999998887766653211 2367899999999
Q ss_pred EEEEEeCCCeEEEEECCCC---CceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCC----
Q 006360 52 LLVTAGDDGTLHLWDTTGR---SPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAP---- 124 (648)
Q Consensus 52 lLaSgs~Dg~V~IWDl~t~---~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~---- 124 (648)
+|++++. +.|++||+.++ . +..+..|...+.+++|+|||++|++++. +.|++||+.+++..........
T Consensus 122 ~l~~~~~-~~i~~~d~~~~~~~~--~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~ 197 (741)
T 2ecf_A 122 RLLFPLG-GELYLYDLKQEGKAA--VRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGN 197 (741)
T ss_dssp EEEEEET-TEEEEEESSSCSTTS--CCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEE
T ss_pred EEEEEeC-CcEEEEECCCCCcce--EEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCccceec
Confidence 5666665 99999999887 4 3457778888999999999999999884 5899999999877655432221
Q ss_pred -------------eEEEEEeCCCCEEEEEEcCC---------------------------------eEEEEECCC-CCCc
Q 006360 125 -------------FSSLAFIDDDWILTAGTSNG---------------------------------RVVFYDIRG-KPQP 157 (648)
Q Consensus 125 -------------I~slafsPdG~~Lasgs~DG---------------------------------~V~IWDl~s-~~~~ 157 (648)
+..++|+|||++|++++.|+ .|++||+.+ ++ .
T Consensus 198 g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~-~ 276 (741)
T 2ecf_A 198 GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ-T 276 (741)
T ss_dssp SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC-C
T ss_pred cccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc-e
Confidence 47899999999999988765 789999987 63 3
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCC
Q 006360 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 158 ~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
..+.....|...+.+++| |||++|++..... ...+..|++||+....
T Consensus 277 ~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~-------~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 277 QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSR-------DQKKLDLVEVTLASNQ 323 (741)
T ss_dssp EEECCCSCSSEEEEEEEE-EETTEEEEEEEET-------TSSEEEEEEEETTTCC
T ss_pred EEecCCCCcceEEEEEEe-CCCCEEEEEEecc-------cCCeEEEEEEECCCCc
Confidence 332221247788999999 9999887752211 1235678888876543
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=3.5e-16 Score=156.51 Aligned_cols=183 Identities=11% Similarity=0.027 Sum_probs=136.0
Q ss_pred CccCCCCEEEEEEC--CC--cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 006360 1 MYNCKDEHLASISL--SG--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (648)
Q Consensus 1 AFSpdG~~Lasgs~--DG--~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~ 76 (648)
+|+|||++|++++. ++ .|.+|+..+++ ...+.. ...+..++|+|+++.+++++..|+.++||+++........
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK--NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCS--SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeec--CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 48999999999983 33 45555554444 444443 2347889999999966668889999999996433223567
Q ss_pred eccCCCCeEEEEEccCCCEEEEEe-CCCeEEEEeCC-CCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcC----------
Q 006360 77 LKQHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPG-SRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSN---------- 143 (648)
Q Consensus 77 l~~H~~~V~slafsPdg~~LaSgs-~Dg~I~IWDl~-tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~D---------- 143 (648)
+..|...+.+++|+|++++|+.++ .++.+++|++. .+..+..+ .+...+.+++|+|+|++|++++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 247 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDL 247 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSE
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccC
Confidence 778888999999999999888766 58888999875 33333333 566788999999999999988875
Q ss_pred -CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEecc
Q 006360 144 -GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETT 187 (648)
Q Consensus 144 -G~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~ 187 (648)
+.|++||+.+.+ ...+.....|...+.+++|+|++++|++++.
T Consensus 248 ~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 248 DVRVQLMDMDGGN-VETLFDLFGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EEEEEEEETTSCS-CEEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred ceEEEEEecCCCC-ceeeeccCCCCcccccceECCCCCEEEEEEe
Confidence 569999998763 3333333467889999999999988877643
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.69 E-value=3.8e-15 Score=154.55 Aligned_cols=196 Identities=14% Similarity=0.124 Sum_probs=148.9
Q ss_pred CccCCCCEEEEE-ECCCcEEEEECCCCceeEEEeCCCCC--------cEEEEEEccCCCeEEEEE-eCCCeEEEEECCCC
Q 006360 1 MYNCKDEHLASI-SLSGDLILHNLASGAKAAELKDPNEQ--------VLRVLDYSRNSRHLLVTA-GDDGTLHLWDTTGR 70 (648)
Q Consensus 1 AFSpdG~~Lasg-s~DG~V~IwDl~sg~~i~~l~~~~~~--------~V~~Vafspdg~~lLaSg-s~Dg~V~IWDl~t~ 70 (648)
+|+++|++++++ ..++.|.+||..+++.+..+..+... .+.+++|+|+++.+++++ +.++.|++||..+.
T Consensus 95 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~ 174 (353)
T 3vgz_A 95 TINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI 174 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT
T ss_pred EECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC
Confidence 478999966554 55789999999999988888764322 268899999998555554 35889999999887
Q ss_pred CceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee-----CCCCeEEEEEeCCCCEEEEEEcC-C
Q 006360 71 SPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-----YEAPFSSLAFIDDDWILTAGTSN-G 144 (648)
Q Consensus 71 ~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~-----h~~~I~slafsPdG~~Lasgs~D-G 144 (648)
+. +..+..+...+.+++|+|++++|++++.++.|.+||+.+++.+..+. +...+.+++|+|+|++|++++.+ +
T Consensus 175 ~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 253 (353)
T 3vgz_A 175 KL-KTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA 253 (353)
T ss_dssp EE-EEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSS
T ss_pred ce-EEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCC
Confidence 74 45555466668999999999999999999999999999998877664 35567889999999988777654 8
Q ss_pred eEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCC
Q 006360 145 RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (648)
Q Consensus 145 ~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~ 213 (648)
.|++||+.+.+ ....+.. . . ..+++|+|+|+++ +++...++.|.+||+.....
T Consensus 254 ~v~~~d~~~~~-~~~~~~~--~-~-~~~~~~s~dg~~l-----------~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 254 EVLVVDTRNGN-ILAKVAA--P-E-SLAVLFNPARNEA-----------YVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp EEEEEETTTCC-EEEEEEC--S-S-CCCEEEETTTTEE-----------EEEETTTTEEEEEETTTTEE
T ss_pred EEEEEECCCCc-EEEEEEc--C-C-CceEEECCCCCEE-----------EEEECCCCeEEEEECCCCeE
Confidence 99999998873 3444442 1 1 2568999976654 33344578899999865443
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.69 E-value=1.3e-15 Score=156.84 Aligned_cols=196 Identities=10% Similarity=0.043 Sum_probs=138.2
Q ss_pred CccCCCCEEEEEECC-CcEEEEECC--CCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC--ce
Q 006360 1 MYNCKDEHLASISLS-GDLILHNLA--SGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS--PK 73 (648)
Q Consensus 1 AFSpdG~~Lasgs~D-G~V~IwDl~--sg~--~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~--~~ 73 (648)
+|+|+|++|++++.+ +.|.+|++. +++ .+..+.. + ..+..++|+|+++.+++++..++.|++||+..+. ..
T Consensus 44 ~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~ 121 (343)
T 1ri6_A 44 VVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL-P-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGV 121 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-S-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEE
T ss_pred EECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc-C-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccc
Confidence 489999999888886 899999987 554 3344543 2 2667899999999555555568999999994221 11
Q ss_pred eEEeccCCCCeEEEEEccCCCEEEEEe-CCCeEEEEeCCC-CceeeE----e--eCCCCeEEEEEeCCCCEEEEEE-cCC
Q 006360 74 VSWLKQHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPGS-RRPSSC----I--TYEAPFSSLAFIDDDWILTAGT-SNG 144 (648)
Q Consensus 74 v~~l~~H~~~V~slafsPdg~~LaSgs-~Dg~I~IWDl~t-gk~v~~----~--~h~~~I~slafsPdG~~Lasgs-~DG 144 (648)
+..+. ....+.+++|+|++++|++++ .++.|++||+.+ ++.... + .....+.+++|+|+|++|++++ .++
T Consensus 122 ~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 122 VDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp EEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred ccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence 23333 334589999999999888877 899999999987 654321 1 2445788999999999776665 789
Q ss_pred eEEEEECCCCCCc---eEEEeec----CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 145 RVVFYDIRGKPQP---LTVLRAC----SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 145 ~V~IWDl~s~~~~---~~~l~~~----~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
.|++||+...... ...+... .....+.+++|+|+|++++. ++..++.|++||+..
T Consensus 201 ~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v-----------~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 201 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYA-----------CDRTASLITVFSVSE 262 (343)
T ss_dssp EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEE-----------EETTTTEEEEEEECT
T ss_pred EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEE-----------EecCCCEEEEEEEcC
Confidence 9999999642211 2222211 11345778999998766543 334588999999863
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.69 E-value=1.4e-15 Score=171.64 Aligned_cols=197 Identities=12% Similarity=0.173 Sum_probs=155.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC--CCCCceeEEec
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT--TGRSPKVSWLK 78 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl--~t~~~~v~~l~ 78 (648)
+|+|++.+++++..|+.|.+||..+++++..+..++. ++.++|+|+++ +|++++.|+.|++||+ .+.+. +..+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~-~l~v~~~d~~V~v~D~~~~t~~~-~~~i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGR-YLLVIGRDARIDMIDLWAKEPTK-VAEIK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSC-EEEEEETTSEEEEEETTSSSCEE-EEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCC-EEEEECCCCeEEEEECcCCCCcE-EEEEe
Confidence 4788898899999999999999999999999985343 88999999999 7888899999999999 66653 44554
Q ss_pred cCCCCeEEEEEcc----CCCEEEEEeC-CCeEEEEeCCCCceeeEeeC------------CCCeEEEEEeCCCCE-EEEE
Q 006360 79 QHSAPTAGISFSS----DDKIIASVGL-DKKLYTYDPGSRRPSSCITY------------EAPFSSLAFIDDDWI-LTAG 140 (648)
Q Consensus 79 ~H~~~V~slafsP----dg~~LaSgs~-Dg~I~IWDl~tgk~v~~~~h------------~~~I~slafsPdG~~-Lasg 140 (648)
+...+..++|+| |++++++++. +++|.+||..+++++..+.. ...+..+.++|++.. +++.
T Consensus 220 -~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 220 -IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp -CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred -cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 455689999999 9999999885 89999999999998877642 237889999997655 5566
Q ss_pred EcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcc
Q 006360 141 TSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (648)
Q Consensus 141 s~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~s 215 (648)
..++.|.+||+...+.+ .+ ....+...+.+++|+|+|++++++ +..+++|.+||+.......
T Consensus 299 ~~~g~i~vvd~~~~~~l-~~-~~i~~~~~~~~~~~spdg~~l~va-----------~~~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNL-TV-TSIGAAPFLHDGGWDSSHRYFMTA-----------ANNSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp TTTTEEEEEECTTSSSC-EE-EEEECCSSCCCEEECTTSCEEEEE-----------EGGGTEEEEEETTTTEEEE
T ss_pred CCCCeEEEEEecCCCcc-ee-EEeccCcCccCceECCCCCEEEEE-----------ecCCCeEEEEECCCCeEEE
Confidence 67899999999876433 21 112356778899999987765433 3457889999987655433
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.68 E-value=2.6e-15 Score=155.15 Aligned_cols=197 Identities=6% Similarity=0.009 Sum_probs=143.1
Q ss_pred CccCCCCEEEEEECCC---cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCe-EEEEECCCCCcee--
Q 006360 1 MYNCKDEHLASISLSG---DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT-LHLWDTTGRSPKV-- 74 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG---~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~-V~IWDl~t~~~~v-- 74 (648)
+|+|||++|+++..++ .|++||+.+++.+..+.. .....+++|+|+++.++++...++. |.+|++.......
T Consensus 90 ~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~ 167 (331)
T 3u4y_A 90 DITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDT 167 (331)
T ss_dssp EECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEE
T ss_pred EECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeec
Confidence 4899999998555553 899999999998887764 3446889999999877777777788 9999997544221
Q ss_pred -EEeccCCCCeEEEEEccCCCEEEE-EeCCCeEEEEeCCCCce---eeEeeCCCCeEEEEEeCCCCEEEEEE-cCCeEEE
Q 006360 75 -SWLKQHSAPTAGISFSSDDKIIAS-VGLDKKLYTYDPGSRRP---SSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVF 148 (648)
Q Consensus 75 -~~l~~H~~~V~slafsPdg~~LaS-gs~Dg~I~IWDl~tgk~---v~~~~h~~~I~slafsPdG~~Lasgs-~DG~V~I 148 (648)
.....+...+.+++|+|++++++. +..++.|++||+.+++. +..+.....+..++|+|||++|+++. .++.|.+
T Consensus 168 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~ 247 (331)
T 3u4y_A 168 GQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFN 247 (331)
T ss_dssp EEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEE
T ss_pred CCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEE
Confidence 112234456899999999996655 45688999999999988 77777778889999999999877665 4778999
Q ss_pred EECCCCCCc-eEEEeec--CCCCC---eeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 149 YDIRGKPQP-LTVLRAC--SSSEA---VSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 149 WDl~s~~~~-~~~l~~~--~h~~~---VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
||+.+++.. +..+... .+... +..++|+|+|++|+. ++..++.|.+||+..
T Consensus 248 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v-----------~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 248 FNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFI-----------SANISRELKVFTISG 304 (331)
T ss_dssp EETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEE-----------EETTTTEEEEEETTS
T ss_pred EECCCCceeeecccccccccCCCCcccccceEECCCCCEEEE-----------ecCCCCcEEEEEecC
Confidence 999876320 1111111 11222 245899998766533 344577999999864
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.68 E-value=2.7e-15 Score=154.02 Aligned_cols=193 Identities=10% Similarity=0.049 Sum_probs=140.1
Q ss_pred CccCCCCEEE-EEECCCcEEEEECCCCceeEEEeCCC----CCcEEEEEEccCCCeEEEEEe------------CCCeEE
Q 006360 1 MYNCKDEHLA-SISLSGDLILHNLASGAKAAELKDPN----EQVLRVLDYSRNSRHLLVTAG------------DDGTLH 63 (648)
Q Consensus 1 AFSpdG~~La-sgs~DG~V~IwDl~sg~~i~~l~~~~----~~~V~~Vafspdg~~lLaSgs------------~Dg~V~ 63 (648)
+|+|+|++++ ++..++.|.+||+.+++.+..+...+ ...+..++|+|+++ .|+++. .++.|+
T Consensus 40 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~i~ 118 (337)
T 1pby_B 40 MVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVA 118 (337)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEE
T ss_pred EEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCC-EEEEEecccccccccccccCceEE
Confidence 4899998765 45567899999999999887776432 11456789999998 455554 579999
Q ss_pred EEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeC----------------------
Q 006360 64 LWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---------------------- 121 (648)
Q Consensus 64 IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h---------------------- 121 (648)
+||+.+.+. +..+.. ...+.+++|+|++++|+++ ++.|++||+.+++.+..+..
T Consensus 119 v~d~~~~~~-~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 194 (337)
T 1pby_B 119 LYDAETLSR-RKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHES 194 (337)
T ss_dssp EEETTTTEE-EEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTT
T ss_pred EEECCCCcE-EEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccC
Confidence 999987763 333333 4568889999999988887 67899999988766543321
Q ss_pred ---------------------------------------------CCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCC
Q 006360 122 ---------------------------------------------EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (648)
Q Consensus 122 ---------------------------------------------~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~ 156 (648)
...+.+++|+|||++|+++ ++.|++||+.+. +
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~-~ 271 (337)
T 1pby_B 195 SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN-A 271 (337)
T ss_dssp TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT-E
T ss_pred CCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC-c
Confidence 1134468999999999888 689999999876 3
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCccc
Q 006360 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (648)
Q Consensus 157 ~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss 216 (648)
....+. ....+.+++|+|+|++++++ +.++.|++||+........
T Consensus 272 ~~~~~~---~~~~~~~~~~s~dg~~l~~~------------~~~~~i~v~d~~~~~~~~~ 316 (337)
T 1pby_B 272 SIKRVP---LPHSYYSVNVSTDGSTVWLG------------GALGDLAAYDAETLEKKGQ 316 (337)
T ss_dssp EEEEEE---CSSCCCEEEECTTSCEEEEE------------SBSSEEEEEETTTCCEEEE
T ss_pred Ccceec---CCCceeeEEECCCCCEEEEE------------cCCCcEEEEECcCCcEEEE
Confidence 333333 34567899999987665443 3478999999876554443
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.66 E-value=5.5e-15 Score=151.78 Aligned_cols=145 Identities=13% Similarity=0.089 Sum_probs=118.7
Q ss_pred CEEEEEECCCcEEEEECCCCceeEEEeCCCCC-cEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-cC----
Q 006360 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQ-VLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-QH---- 80 (648)
Q Consensus 7 ~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~-~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~-~H---- 80 (648)
++|++++.++.|++||+.+++.+..+...+.. .+..++|+|+++.+++++..++.|++||+.+++. +..+. .+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET-LGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE-EEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe-EeeEEcCCcccc
Confidence 47899999999999999999988888743322 3677999999986777777889999999988774 33332 22
Q ss_pred CCCeEEEEEccCCCEEEEEe------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEE
Q 006360 81 SAPTAGISFSSDDKIIASVG------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs------------~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~I 148 (648)
...+.+++|+|++++|+++. .++.|++||+.+++.+..+.....+.+++|+|||++|+++ ++.|++
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEE
Confidence 22678899999999998886 5799999999999888777767778899999999988887 688999
Q ss_pred EECCCC
Q 006360 149 YDIRGK 154 (648)
Q Consensus 149 WDl~s~ 154 (648)
||+.+.
T Consensus 159 ~d~~~~ 164 (337)
T 1pby_B 159 MDPEAG 164 (337)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 999876
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.66 E-value=3.1e-16 Score=180.32 Aligned_cols=198 Identities=10% Similarity=0.064 Sum_probs=146.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCC--cEEEEEEccCCCeEEEEEeCC---------CeEEEEECCC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQ--VLRVLDYSRNSRHLLVTAGDD---------GTLHLWDTTG 69 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~--~V~~Vafspdg~~lLaSgs~D---------g~V~IWDl~t 69 (648)
+|+|||+++++ +.||.|++||+.+++....+..+... .|..++|+|||+ +|++++.+ +.|++||+.+
T Consensus 23 ~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~-~l~~~~~~~~~~~~~~~~~i~~~d~~~ 100 (723)
T 1xfd_A 23 KWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDRE-YALFSYNVEPIYQHSYTGYYVLSKIPH 100 (723)
T ss_dssp CBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSS-EEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred EEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCC-EEEEEecCccceeecceeeEEEEECCC
Confidence 59999997766 78999999999999887777643221 378899999999 67766654 7899999988
Q ss_pred CCceeEEec---cCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCC------------------eEE
Q 006360 70 RSPKVSWLK---QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAP------------------FSS 127 (648)
Q Consensus 70 ~~~~v~~l~---~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~-h~~~------------------I~s 127 (648)
+.. ..+. .|...+..++|+|||++|+.++. +.|++||+.+++...... +... +.+
T Consensus 101 ~~~--~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~ 177 (723)
T 1xfd_A 101 GDP--QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA 177 (723)
T ss_dssp CCC--EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred Cce--EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcce
Confidence 764 2333 34455899999999999999886 789999999988766553 2222 378
Q ss_pred EEEeCCCCEEEEEEcCC----------------------------------eEEEEECCCCCCceEEEeec----CCCCC
Q 006360 128 LAFIDDDWILTAGTSNG----------------------------------RVVFYDIRGKPQPLTVLRAC----SSSEA 169 (648)
Q Consensus 128 lafsPdG~~Lasgs~DG----------------------------------~V~IWDl~s~~~~~~~l~~~----~h~~~ 169 (648)
++|+|||++|++++.|+ .|++||+.+... ...+... .+...
T Consensus 178 ~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~-~~~l~~~~~~~~~~~~ 256 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH-DLEMMPPDDPRMREYY 256 (723)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC-CEECCCCCCGGGSSEE
T ss_pred EEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce-eEEeeCCccCCCccce
Confidence 99999999999887653 799999988742 2333311 13567
Q ss_pred eeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCC
Q 006360 170 VSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 170 VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
+.+++|+|||++++..... +..+..|++||+....
T Consensus 257 ~~~~~~SpDg~~l~~~~~~--------~~~~~~i~~~d~~~g~ 291 (723)
T 1xfd_A 257 ITMVKWATSTKVAVTWLNR--------AQNVSILTLCDATTGV 291 (723)
T ss_dssp EEEEEESSSSEEEEEEEET--------TSCEEEEEEEETTTCC
T ss_pred eEEEEEeCCCeEEEEEEcC--------CCCeEEEEEEeCCCCc
Confidence 8999999999877654221 1124567888876433
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.65 E-value=3.9e-15 Score=153.92 Aligned_cols=151 Identities=11% Similarity=0.050 Sum_probs=118.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-c
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-Q 79 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~-~ 79 (648)
++++++.++++++.++.|++||+.+++.+..+..+....+..++|+|+++.+++++..++.|++||+.+++. +..+. .
T Consensus 6 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~-~~~~~~~ 84 (349)
T 1jmx_B 6 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN-TFHANLS 84 (349)
T ss_dssp CCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEESC
T ss_pred cccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE-EEEEEcc
Confidence 578888899999999999999999999888887543224567899999986667777889999999988764 33333 2
Q ss_pred C-----CCCeEEEEEccCCCEEEEEeCC------------CeEEEEeCCCCce---eeEeeCCCCeEEEEEeCCCCEEEE
Q 006360 80 H-----SAPTAGISFSSDDKIIASVGLD------------KKLYTYDPGSRRP---SSCITYEAPFSSLAFIDDDWILTA 139 (648)
Q Consensus 80 H-----~~~V~slafsPdg~~LaSgs~D------------g~I~IWDl~tgk~---v~~~~h~~~I~slafsPdG~~Las 139 (648)
+ ...+.+++|+|++++|++++.+ +.|.+||+.+++. +..+.+...+.+++|+|||+ +++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~ 163 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYV 163 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEE
Confidence 2 2337889999999999999866 8999999988543 34445666789999999999 555
Q ss_pred EEcCCeEEEEECCCCC
Q 006360 140 GTSNGRVVFYDIRGKP 155 (648)
Q Consensus 140 gs~DG~V~IWDl~s~~ 155 (648)
++ +.|++||+.+.+
T Consensus 164 ~~--~~i~~~d~~~~~ 177 (349)
T 1jmx_B 164 AG--PDIYKMDVKTGK 177 (349)
T ss_dssp ES--SSEEEECTTTCC
T ss_pred cc--CcEEEEeCCCCc
Confidence 53 349999998763
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.65 E-value=3.9e-15 Score=153.29 Aligned_cols=189 Identities=8% Similarity=0.008 Sum_probs=133.5
Q ss_pred CEEE-EEECCCcEEEEECC-CCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCC-CeEEEEECC--CCCce-eEEec
Q 006360 7 EHLA-SISLSGDLILHNLA-SGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD-GTLHLWDTT--GRSPK-VSWLK 78 (648)
Q Consensus 7 ~~La-sgs~DG~V~IwDl~-sg~--~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~D-g~V~IWDl~--t~~~~-v~~l~ 78 (648)
++++ +++.|+.|++||+. +++ .+..+. +...+.+++|+|+++ +|++++.+ +.|++|++. ++... +..+.
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~spdg~-~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 81 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVD--VPGQVQPMVVSPDKR-YLYVGVRPEFRVLAYRIAPDDGALTFAAESA 81 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSCCCCEEECTTSS-EEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEe--cCCCCceEEECCCCC-EEEEeecCCCeEEEEEecCCCCceeeccccc
Confidence 3444 44779999999985 342 333333 455677899999998 55555555 999999997 44422 23333
Q ss_pred cCCCCeEEEEEccCCCEEEEEeC-CCeEEEEeCC---CCceeeEeeCCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECCC
Q 006360 79 QHSAPTAGISFSSDDKIIASVGL-DKKLYTYDPG---SRRPSSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRG 153 (648)
Q Consensus 79 ~H~~~V~slafsPdg~~LaSgs~-Dg~I~IWDl~---tgk~v~~~~h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~s 153 (648)
.+. .+.+++|+|++++|++++. ++.|++||+. ..+.+..+.....+.+++|+|+|++|++++ .++.|++||+..
T Consensus 82 ~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 82 LPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp CSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 333 7899999999998876665 8899999994 334555555666799999999999888887 899999999987
Q ss_pred CCCceEEE--e-ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 154 KPQPLTVL--R-ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 154 ~~~~~~~l--~-~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
........ . .......+.+++|+|++++++. ++..++.|.+||+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~-----------~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYC-----------VNELNSSVDVWELKD 209 (343)
T ss_dssp TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEE-----------EETTTTEEEEEESSC
T ss_pred CCceeeecccccccCCCCCcceEEECCCCCEEEE-----------EeCCCCEEEEEEecC
Confidence 32322211 1 1123457889999998765533 334588999999864
No 145
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.65 E-value=1.5e-14 Score=163.08 Aligned_cols=193 Identities=13% Similarity=0.104 Sum_probs=146.0
Q ss_pred CccCCCCEEEEEECCCcEEEEEC--CCCceeEEEeCCCCCcEEEEEEcc----CCCeEEEEEe-CCCeEEEEECCCCCce
Q 006360 1 MYNCKDEHLASISLSGDLILHNL--ASGAKAAELKDPNEQVLRVLDYSR----NSRHLLVTAG-DDGTLHLWDTTGRSPK 73 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl--~sg~~i~~l~~~~~~~V~~Vafsp----dg~~lLaSgs-~Dg~V~IWDl~t~~~~ 73 (648)
+|+|||++|++++.|+.|++||+ .+++++..+. +...++.++|+| +++ ++++++ .+++|.|||..+.++
T Consensus 185 ~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~--~g~~p~~va~sp~~~~dg~-~l~v~~~~~~~v~v~D~~t~~~- 260 (543)
T 1nir_A 185 RMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK--IGIEARSVESSKFKGYEDR-YTIAGAYWPPQFAIMDGETLEP- 260 (543)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE--CCSEEEEEEECCSTTCTTT-EEEEEEEESSEEEEEETTTCCE-
T ss_pred EECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe--cCCCcceEEeCCCcCCCCC-EEEEEEccCCeEEEEecccccc-
Confidence 48999999999999999999999 8888888887 345678899999 999 455554 689999999988775
Q ss_pred eEEecc----------CC-CCeEEEEEccCCC-EEEEEeCCCeEEEEeCCCCceee--EeeCCCCeEEEEEeCCCCEEEE
Q 006360 74 VSWLKQ----------HS-APTAGISFSSDDK-IIASVGLDKKLYTYDPGSRRPSS--CITYEAPFSSLAFIDDDWILTA 139 (648)
Q Consensus 74 v~~l~~----------H~-~~V~slafsPdg~-~LaSgs~Dg~I~IWDl~tgk~v~--~~~h~~~I~slafsPdG~~Las 139 (648)
+..+.. |. ..+.++.++|++. ++++...++.|.+||+.+.+.+. .+.+...+.+++|+|+|++|++
T Consensus 261 ~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~v 340 (543)
T 1nir_A 261 KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMT 340 (543)
T ss_dssp EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEE
T ss_pred ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEE
Confidence 344433 22 3789999999654 56777889999999998876544 5567778899999999998776
Q ss_pred EE-cCCeEEEEECCCCCCceEEEeec--CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEee-CCCeEEcCCCCC
Q 006360 140 GT-SNGRVVFYDIRGKPQPLTVLRAC--SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGA-VGDSILMPDPLP 210 (648)
Q Consensus 140 gs-~DG~V~IWDl~s~~~~~~~l~~~--~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s-~D~~IkvWDlr~ 210 (648)
++ .+++|.+||+.++ ++...+... .|.+....+ ++|+ ++.+++++. .|++|.+||+.+
T Consensus 341 a~~~~~~v~v~D~~tg-~l~~~i~~g~~ph~g~g~~~-~~p~-----------~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 341 AANNSNKVAVIDSKDR-RLSALVDVGKTPHPGRGANF-VHPK-----------YGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEGGGTEEEEEETTTT-EEEEEEECSSSBCCTTCEEE-EETT-----------TEEEEEEEBSSSSEEEEEECCT
T ss_pred EecCCCeEEEEECCCC-eEEEeeccCCCCCCCCCccc-CCCC-----------CccEEEeccCCCceEEEEEeCC
Confidence 65 5889999999987 444444421 254433333 3554 234455554 589999999987
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.64 E-value=4.2e-15 Score=153.72 Aligned_cols=193 Identities=9% Similarity=0.080 Sum_probs=137.3
Q ss_pred CccCCCCEEE-EEECCCcEEEEECCCCceeEEEeCCC-----CCcEEEEEEccCCCeEEEEEeC------------CCeE
Q 006360 1 MYNCKDEHLA-SISLSGDLILHNLASGAKAAELKDPN-----EQVLRVLDYSRNSRHLLVTAGD------------DGTL 62 (648)
Q Consensus 1 AFSpdG~~La-sgs~DG~V~IwDl~sg~~i~~l~~~~-----~~~V~~Vafspdg~~lLaSgs~------------Dg~V 62 (648)
+|+|||++++ +...++.|++||+.+++.+..+...+ ...+..++|+|+++ +|++++. ++.|
T Consensus 49 ~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~~~i 127 (349)
T 1jmx_B 49 MMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYVVKPPRL 127 (349)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSS-EEEEEEEEEEECSSCEEECCCEE
T ss_pred EECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCC-EEEEEcccccccccccccCCCeE
Confidence 4789998665 44568899999999998887776433 22356789999998 5665554 4899
Q ss_pred EEEECCCCCc--eeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCC------------------
Q 006360 63 HLWDTTGRSP--KVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYE------------------ 122 (648)
Q Consensus 63 ~IWDl~t~~~--~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~------------------ 122 (648)
++||+.+++. .+..+. +...+.+++|+|+++ +++++.+ |++||+.+++.+..+...
T Consensus 128 ~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (349)
T 1jmx_B 128 EVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGPD--IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPH 203 (349)
T ss_dssp EEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESSS--EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCC
T ss_pred EEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccCc--EEEEeCCCCceeccccccccCCccccCccceeeecC
Confidence 9999976431 122232 344689999999999 5555444 999999988876554321
Q ss_pred ---------------------------------------------------CCeEEEEEeC-CCCEEEEEEcCCeEEEEE
Q 006360 123 ---------------------------------------------------APFSSLAFID-DDWILTAGTSNGRVVFYD 150 (648)
Q Consensus 123 ---------------------------------------------------~~I~slafsP-dG~~Lasgs~DG~V~IWD 150 (648)
..+.+++|+| ||++|+++ ++.|++||
T Consensus 204 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d 281 (349)
T 1jmx_B 204 QSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYD 281 (349)
T ss_dssp CCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEE
T ss_pred CCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEE
Confidence 1345677889 99999988 88999999
Q ss_pred CCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCccc
Q 006360 151 IRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (648)
Q Consensus 151 l~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss 216 (648)
+.+. +....+. ....+.+++|+++|++|+++ +.++.|++||+........
T Consensus 282 ~~~~-~~~~~~~---~~~~~~~~~~s~dg~~l~~~------------~~~~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 282 LKQR-KLIKAAN---LDHTYYCVAFDKKGDKLYLG------------GTFNDLAVFNPDTLEKVKN 331 (349)
T ss_dssp TTTT-EEEEEEE---CSSCCCEEEECSSSSCEEEE------------SBSSEEEEEETTTTEEEEE
T ss_pred CccC-eEEEEEc---CCCCccceEECCCCCEEEEe------------cCCCeEEEEeccccceeee
Confidence 9886 3333333 34457899999987665443 3478999999876554433
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.64 E-value=2.2e-14 Score=149.81 Aligned_cols=197 Identities=9% Similarity=0.101 Sum_probs=134.6
Q ss_pred CccCCCCEEEEEE-CCCcEEEEECCC-Cc--eeEEEeCC--------CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC
Q 006360 1 MYNCKDEHLASIS-LSGDLILHNLAS-GA--KAAELKDP--------NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT 68 (648)
Q Consensus 1 AFSpdG~~Lasgs-~DG~V~IwDl~s-g~--~i~~l~~~--------~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~ 68 (648)
+|+|||++|++++ .++.|.+|++.. +. .+..+... ....+.+++|+|+++ ++++...++.|++||+.
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEEC
Confidence 5899999988887 678999999953 32 23333321 122478899999999 88888889999999998
Q ss_pred -CCCce-eEEecc-CCCCeEEEEEccCCCEEEE-EeCCCeEEEEeCCC--Ccee--eEee-CC------CCeEEEEEeCC
Q 006360 69 -GRSPK-VSWLKQ-HSAPTAGISFSSDDKIIAS-VGLDKKLYTYDPGS--RRPS--SCIT-YE------APFSSLAFIDD 133 (648)
Q Consensus 69 -t~~~~-v~~l~~-H~~~V~slafsPdg~~LaS-gs~Dg~I~IWDl~t--gk~v--~~~~-h~------~~I~slafsPd 133 (648)
++... +..+.. ....+..++|+||+++|++ ...++.|++||+.. ++.. ..+. .. ..+..++|+||
T Consensus 171 ~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spd 250 (347)
T 3hfq_A 171 DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHD 250 (347)
T ss_dssp TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTT
T ss_pred CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCC
Confidence 44321 111222 2346888999999996665 56688999999874 5432 2221 11 45889999999
Q ss_pred CCEEE-EEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 134 DWILT-AGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 134 G~~La-sgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
|++|+ +...++.|.+||+........+.....+...+.+++|+|+|++|+++ +..++.|.+|++.
T Consensus 251 G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~-----------~~~~~~v~v~~~d 316 (347)
T 3hfq_A 251 GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVV-----------NQNTDNATLYARD 316 (347)
T ss_dssp SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEE-----------ETTTTEEEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEE-----------EcCCCcEEEEEEe
Confidence 99875 45568999999997432222222222456678999999987766554 2335788888553
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.60 E-value=1.3e-13 Score=144.84 Aligned_cols=194 Identities=8% Similarity=0.093 Sum_probs=131.5
Q ss_pred CCCEEEEEE-CCCcEEEEECCCCceeEE----Ee--C-------CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Q 006360 5 KDEHLASIS-LSGDLILHNLASGAKAAE----LK--D-------PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR 70 (648)
Q Consensus 5 dG~~Lasgs-~DG~V~IwDl~sg~~i~~----l~--~-------~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~ 70 (648)
++++|++++ .++.|.+|++.....+.. +. + .+...+++++|+|+++.+++++..++.|++|++...
T Consensus 108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~ 187 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPN 187 (361)
T ss_dssp CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence 778777776 578999999975433221 11 1 012335789999999966666666899999998654
Q ss_pred Cc------e------eEEeccCCCCeEEEEEccCCCEEEEEe-CCCeEEEEeCCCCceee--Eee----CCCCeEEEEEe
Q 006360 71 SP------K------VSWLKQHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPGSRRPSS--CIT----YEAPFSSLAFI 131 (648)
Q Consensus 71 ~~------~------v~~l~~H~~~V~slafsPdg~~LaSgs-~Dg~I~IWDl~tgk~v~--~~~----h~~~I~slafs 131 (648)
.. . ......+...+.+++|+||++++++++ .++.|.+||+.+++... .+. +...+..++|+
T Consensus 188 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~s 267 (361)
T 3scy_A 188 ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLS 267 (361)
T ss_dssp CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEEC
T ss_pred CCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEEC
Confidence 31 1 122334456688999999999887777 68999999998775422 221 33457899999
Q ss_pred CCCCEEEEEEcC--CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 132 DDDWILTAGTSN--GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 132 PdG~~Lasgs~D--G~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
|||++|+++..+ +.|.+|++......+..+........+.+++|+|+|++|+++ +..++.|.+|++.
T Consensus 268 pdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~-----------~~~~~~v~v~~~d 336 (361)
T 3scy_A 268 PDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVA-----------CRDTNVIQIFERD 336 (361)
T ss_dssp TTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEE-----------ETTTTEEEEEEEC
T ss_pred CCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEE-----------ECCCCCEEEEEEE
Confidence 999999777765 889999997321222222222225678899999988776554 2246778886443
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.59 E-value=5.7e-14 Score=146.64 Aligned_cols=195 Identities=9% Similarity=0.086 Sum_probs=131.1
Q ss_pred CccCCCCEEEEEEC---CCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEe-CCCeEEEEECCC-CCce
Q 006360 1 MYNCKDEHLASISL---SGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAG-DDGTLHLWDTTG-RSPK 73 (648)
Q Consensus 1 AFSpdG~~Lasgs~---DG~V~IwDl~sg~--~i~~l~~~~~~~V~~Vafspdg~~lLaSgs-~Dg~V~IWDl~t-~~~~ 73 (648)
+|+|||+ |++++. ++.|++||+.+++ .+..+.. +...+..++|+|+++. |++++ .++.|.+||+.. +...
T Consensus 46 a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~-~~~~p~~~a~spdg~~-l~~~~~~~~~v~v~~~~~~g~~~ 122 (347)
T 3hfq_A 46 ALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA-PGTPPAYVAVDEARQL-VYSANYHKGTAEVMKIAADGALT 122 (347)
T ss_dssp EECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEE-ESCCCSEEEEETTTTE-EEEEETTTTEEEEEEECTTSCEE
T ss_pred EEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeec-CCCCCEEEEECCCCCE-EEEEeCCCCEEEEEEeCCCCCee
Confidence 5899999 555544 6899999997665 3333332 3445667999999994 55555 789999999953 2211
Q ss_pred -eEEecc---------CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCC-CCceeeEe----eCCCCeEEEEEeCCCCEEE
Q 006360 74 -VSWLKQ---------HSAPTAGISFSSDDKIIASVGLDKKLYTYDPG-SRRPSSCI----TYEAPFSSLAFIDDDWILT 138 (648)
Q Consensus 74 -v~~l~~---------H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~-tgk~v~~~----~h~~~I~slafsPdG~~La 138 (648)
+..+.. +...+.+++|+|+++++++...++.|++||+. +++..... .....+..++|+|||++|+
T Consensus 123 ~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 202 (347)
T 3hfq_A 123 LTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAF 202 (347)
T ss_dssp EEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred ecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEE
Confidence 222211 12348899999999977777778899999998 55543221 2344678899999999766
Q ss_pred EE-EcCCeEEEEECCCCCCceE---EEeecCC----CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 139 AG-TSNGRVVFYDIRGKPQPLT---VLRACSS----SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 139 sg-s~DG~V~IWDl~s~~~~~~---~l~~~~h----~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
+. ..++.|++|++......+. .+..... ...+..++|+|+|++|+. ++..++.|.+||+.
T Consensus 203 v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v-----------~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 203 LAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYV-----------SNRGYNTLAVFAVT 270 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEE-----------EEETTTEEEEEEEC
T ss_pred EEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEE-----------EeCCCCEEEEEEEC
Confidence 64 5688999999885222222 2221111 145889999998876533 33457889999886
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.59 E-value=2.3e-14 Score=173.10 Aligned_cols=174 Identities=10% Similarity=0.157 Sum_probs=143.9
Q ss_pred Ccc-CCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCC-cEEEEEEccCCCeEEEEEeCCCeEE-EEECCCCCceeEEe
Q 006360 1 MYN-CKDEHLASISLSGDLILHNLASGAKAAELKDPNEQ-VLRVLDYSRNSRHLLVTAGDDGTLH-LWDTTGRSPKVSWL 77 (648)
Q Consensus 1 AFS-pdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~-~V~~Vafspdg~~lLaSgs~Dg~V~-IWDl~t~~~~v~~l 77 (648)
+|+ |||++|++++ ++.|++|++..++.. .+.. +.. .+..++|+ +++ .|+.++.++.++ +||+.++. ...+
T Consensus 302 ~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~-~~~~~~~~~~~s-dg~-~l~~~s~~~~l~~~~d~~~~~--~~~l 374 (1045)
T 1k32_A 302 DFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPE-PLRIRYVRRGGD-TKV-AFIHGTREGDFLGIYDYRTGK--AEKF 374 (1045)
T ss_dssp EEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSC-CSCEEEEEECSS-SEE-EEEEEETTEEEEEEEETTTCC--EEEC
T ss_pred eecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccC-CCcceEEeeeEc-CCC-eEEEEECCCceEEEEECCCCC--ceEe
Confidence 478 9999998887 789999999776644 3544 444 78899999 887 677777788898 99998776 3445
Q ss_pred ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCC----------eE
Q 006360 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNG----------RV 146 (648)
Q Consensus 78 ~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG----------~V 146 (648)
..|...+.+++|+||+++|++++.++.|++||+.+++..... .|...+.+++|+|||++|++++.++ .|
T Consensus 375 ~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i 454 (1045)
T 1k32_A 375 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI 454 (1045)
T ss_dssp CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeE
Confidence 588889999999999999999999999999999999888777 6888899999999999999887654 89
Q ss_pred EEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006360 147 VFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 147 ~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~ 185 (648)
++||+.++. .. ....|...+.+++|+|||++|+..
T Consensus 455 ~l~d~~~g~--~~--~l~~~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 455 HVYDMEGRK--IF--AATTENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp EEEETTTTE--EE--ECSCSSSBEEEEEECTTSCEEEEE
T ss_pred EEEECCCCc--EE--EeeCCCcccCCceEcCCCCEEEEE
Confidence 999998862 23 333678889999999998887665
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.58 E-value=2.4e-14 Score=164.57 Aligned_cols=179 Identities=9% Similarity=0.040 Sum_probs=129.7
Q ss_pred CccCCCCEEEEEECC---------CcEEEEECCCCceeEEEeC--CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Q 006360 1 MYNCKDEHLASISLS---------GDLILHNLASGAKAAELKD--PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG 69 (648)
Q Consensus 1 AFSpdG~~Lasgs~D---------G~V~IwDl~sg~~i~~l~~--~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t 69 (648)
+|||||++|++++.+ +.|++||+.+++. ..+.. .+...+..++|+|||+ .|+.++. +.|++||+.+
T Consensus 67 ~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~-~la~~~~-~~i~~~~~~~ 143 (723)
T 1xfd_A 67 EISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQ-QLIFIFE-NNIYYCAHVG 143 (723)
T ss_dssp EECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTT-CEEEEET-TEEEEESSSS
T ss_pred EECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCC-EEEEEEC-CeEEEEECCC
Confidence 489999999999764 7888999988876 33432 1233467789999998 5666665 7999999988
Q ss_pred CCceeEEeccCCCCe------------------EEEEEccCCCEEEEEeCCC----------------------------
Q 006360 70 RSPKVSWLKQHSAPT------------------AGISFSSDDKIIASVGLDK---------------------------- 103 (648)
Q Consensus 70 ~~~~v~~l~~H~~~V------------------~slafsPdg~~LaSgs~Dg---------------------------- 103 (648)
+.. ......+...+ .+++|+|||++|++++.|+
T Consensus 144 g~~-~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 222 (723)
T 1xfd_A 144 KQA-IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAG 222 (723)
T ss_dssp SCC-EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTT
T ss_pred Cce-EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCC
Confidence 764 33334433333 7899999999999987653
Q ss_pred ------eEEEEeCCCCceeeEee-C------CCCeEEEEEeCCCCEEEEEEc----CCeEEEEECCCCCCceEEEeecCC
Q 006360 104 ------KLYTYDPGSRRPSSCIT-Y------EAPFSSLAFIDDDWILTAGTS----NGRVVFYDIRGKPQPLTVLRACSS 166 (648)
Q Consensus 104 ------~I~IWDl~tgk~v~~~~-h------~~~I~slafsPdG~~Lasgs~----DG~V~IWDl~s~~~~~~~l~~~~h 166 (648)
.|++||+.+++....+. + ...+..++|+|||++|++... +..|++||+.++. ....+.. .+
T Consensus 223 ~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~-~~ 300 (723)
T 1xfd_A 223 SENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV-CTKKHED-ES 300 (723)
T ss_dssp SCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC-EEEEEEE-EC
T ss_pred CCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc-ceEEEEe-cc
Confidence 79999999887644443 2 567899999999998877654 3579999998874 3333321 23
Q ss_pred CCCe----eEEEEccCCCeEEEe
Q 006360 167 SEAV----SSLCWQRAKPVFIDE 185 (648)
Q Consensus 167 ~~~V----tsLafspdg~~Las~ 185 (648)
...+ ..++|+|||++|+..
T Consensus 301 ~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 301 EAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp SSCCCCCCCCCEECTTSCSEEEE
T ss_pred CCEEeccCCCceEcCCCCeEEEE
Confidence 3443 378999998877653
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.57 E-value=2e-14 Score=165.12 Aligned_cols=181 Identities=13% Similarity=0.139 Sum_probs=132.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCC-----CceeEEEeCCCCCc-------------EEEEEEccCCCeEEEEEe-----
Q 006360 1 MYNCKDEHLASISLSGDLILHNLAS-----GAKAAELKDPNEQV-------------LRVLDYSRNSRHLLVTAG----- 57 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~s-----g~~i~~l~~~~~~~-------------V~~Vafspdg~~lLaSgs----- 57 (648)
+|+|||++|+++ .|+.|++||+.+ ++.......+.... +.+++|+|||+ +|++++
T Consensus 127 ~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~-~la~~~~d~~~ 204 (706)
T 2z3z_A 127 DFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS-CLAFYRMDQSM 204 (706)
T ss_dssp EECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS-EEEEEEEECTT
T ss_pred cCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC-EEEEEEECCCC
Confidence 489999999985 679999999987 76654443322221 47799999999 566655
Q ss_pred ----------------------------CCCeEEEEECCCCCceeEEe-ccCCCCeEEEEEccCCCEEEEEeCCC-----
Q 006360 58 ----------------------------DDGTLHLWDTTGRSPKVSWL-KQHSAPTAGISFSSDDKIIASVGLDK----- 103 (648)
Q Consensus 58 ----------------------------~Dg~V~IWDl~t~~~~v~~l-~~H~~~V~slafsPdg~~LaSgs~Dg----- 103 (648)
.+..|++||+.++....... ..|...+.+++|+||+++|++++.|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 284 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNEC 284 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEE
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCee
Confidence 44679999998876321111 25667799999999999999988776
Q ss_pred eEEEEeCCCC-ceeeEe--eCCC---CeEEEEEeC--CCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeE-EE
Q 006360 104 KLYTYDPGSR-RPSSCI--TYEA---PFSSLAFID--DDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSS-LC 174 (648)
Q Consensus 104 ~I~IWDl~tg-k~v~~~--~h~~---~I~slafsP--dG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~Vts-La 174 (648)
.|++||+.++ ...... .+.. .+.+++|+| ||++|+++..||.++||++.........+. .|...+.+ ++
T Consensus 285 ~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~--~~~~~v~~~~~ 362 (706)
T 2z3z_A 285 KVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT--KGEWEVTNFAG 362 (706)
T ss_dssp EEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC--CSSSCEEEEEE
T ss_pred EEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC--CCCeEEEeeeE
Confidence 9999999998 433333 2222 246789999 999999999999999998763323344444 56677876 79
Q ss_pred EccCCCeEEEe
Q 006360 175 WQRAKPVFIDE 185 (648)
Q Consensus 175 fspdg~~Las~ 185 (648)
|+|+|+.|+..
T Consensus 363 ~spdg~~l~~~ 373 (706)
T 2z3z_A 363 FDPKGTRLYFE 373 (706)
T ss_dssp ECTTSSEEEEE
T ss_pred EcCCCCEEEEE
Confidence 99988776554
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.56 E-value=3.1e-14 Score=163.57 Aligned_cols=177 Identities=12% Similarity=0.112 Sum_probs=128.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC-----CCceeE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG-----RSPKVS 75 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t-----~~~~v~ 75 (648)
+|+|| ++++.+ .++.|++||+.+++...... +...+.+++|+|||+ .|+.+ .|+.|++||+.+ ++. ..
T Consensus 88 ~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~--~~~~~~~~~~SpdG~-~la~~-~~~~i~v~~~~~~~~~~g~~-~~ 160 (706)
T 2z3z_A 88 LDAGR-GLVVLF-TQGGLVGFDMLARKVTYLFD--TNEETASLDFSPVGD-RVAYV-RNHNLYIARGGKLGEGMSRA-IA 160 (706)
T ss_dssp EETTT-TEEEEE-ETTEEEEEETTTTEEEEEEC--CTTCCTTCEECTTSS-EEEEE-ETTEEEEEECBCTTSCCCCC-EE
T ss_pred EECCC-CeEEEE-ECCEEEEEECCCCceEEccC--CcccccCCcCCCCCC-EEEEE-ECCeEEEEecCcccccCCCc-EE
Confidence 48999 666655 45999999998876654433 345567789999998 56654 679999999987 653 23
Q ss_pred EeccCCCC--------------eEEEEEccCCCEEEEEe---------------------------------CCCeEEEE
Q 006360 76 WLKQHSAP--------------TAGISFSSDDKIIASVG---------------------------------LDKKLYTY 108 (648)
Q Consensus 76 ~l~~H~~~--------------V~slafsPdg~~LaSgs---------------------------------~Dg~I~IW 108 (648)
....+... +.+++|+|||++|++++ .+..|++|
T Consensus 161 ~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~ 240 (706)
T 2z3z_A 161 VTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIY 240 (706)
T ss_dssp SCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEE
T ss_pred eccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEE
Confidence 23333332 48999999999999987 44689999
Q ss_pred eCCCCceeeEe---eCCCCeEEEEEeCCCCEEEEEEcCC-----eEEEEECCCCCCceEEEeecCCC---CCeeEEEEcc
Q 006360 109 DPGSRRPSSCI---TYEAPFSSLAFIDDDWILTAGTSNG-----RVVFYDIRGKPQPLTVLRACSSS---EAVSSLCWQR 177 (648)
Q Consensus 109 Dl~tgk~v~~~---~h~~~I~slafsPdG~~Lasgs~DG-----~V~IWDl~s~~~~~~~l~~~~h~---~~VtsLafsp 177 (648)
|+.+++..... .+...+.+++|+|||++|++++.++ .|++||+.++.....+.. ..+. ..+.+++|+|
T Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~sp 319 (706)
T 2z3z_A 241 HLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV-ETDKHYVEPLHPLTFLP 319 (706)
T ss_dssp ETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE-EECSSCCCCCSCCEECT
T ss_pred ECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE-ccCCCeECccCCceeec
Confidence 99998865544 3566799999999999999988776 899999988733222222 1222 2357789999
Q ss_pred --CCCeEEEe
Q 006360 178 --AKPVFIDE 185 (648)
Q Consensus 178 --dg~~Las~ 185 (648)
+|++++++
T Consensus 320 ~~dg~~l~~~ 329 (706)
T 2z3z_A 320 GSNNQFIWQS 329 (706)
T ss_dssp TCSSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 87766554
No 154
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.56 E-value=2.5e-14 Score=165.12 Aligned_cols=178 Identities=16% Similarity=0.123 Sum_probs=130.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCc---------------EEEEEEccCCCeEEEEEeCCC-----
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQV---------------LRVLDYSRNSRHLLVTAGDDG----- 60 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~---------------V~~Vafspdg~~lLaSgs~Dg----- 60 (648)
+|+|||++|++++ ++.|++||+.+++.......+.... +..++|+|||+ .|+.++.|+
T Consensus 158 ~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~ 235 (741)
T 2ecf_A 158 KLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPV 235 (741)
T ss_dssp EECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCE
T ss_pred cCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCce
Confidence 4899999999887 4689999998876654433322211 36689999999 455555544
Q ss_pred ----------------------------eEEEEECCC-CCceeEEec--cCCCCeEEEEEccCCCEEEEEeC-----CCe
Q 006360 61 ----------------------------TLHLWDTTG-RSPKVSWLK--QHSAPTAGISFSSDDKIIASVGL-----DKK 104 (648)
Q Consensus 61 ----------------------------~V~IWDl~t-~~~~v~~l~--~H~~~V~slafsPdg~~LaSgs~-----Dg~ 104 (648)
.|++||+.+ ++.. .... .|...+.+++| ||+++|++++. +..
T Consensus 236 ~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~ 313 (741)
T 2ecf_A 236 QKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQ-WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLD 313 (741)
T ss_dssp EEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCE-EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEE
T ss_pred EecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceE-EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEE
Confidence 789999988 7642 2222 47788999999 99999987764 568
Q ss_pred EEEEeCCCCceeeEeeC-C-C---CeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEE-EEccC
Q 006360 105 LYTYDPGSRRPSSCITY-E-A---PFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSL-CWQRA 178 (648)
Q Consensus 105 I~IWDl~tgk~v~~~~h-~-~---~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsL-afspd 178 (648)
|++||+.++++...+.. . . .+..++|+|||++++++..||.++||.+..... ...+. .|...|.++ .|+|+
T Consensus 314 i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~--~~~~~v~~~~~~s~d 390 (741)
T 2ecf_A 314 LVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT--HGNWSVDELLAVDEK 390 (741)
T ss_dssp EEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC--CSSSCEEEEEEEETT
T ss_pred EEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee--ecceEEEeEeEEeCC
Confidence 99999999987766642 2 2 456899999999999999999888887763323 44444 567778887 59998
Q ss_pred CCeEEEe
Q 006360 179 KPVFIDE 185 (648)
Q Consensus 179 g~~Las~ 185 (648)
|+.|+..
T Consensus 391 g~~l~~~ 397 (741)
T 2ecf_A 391 AGLAYFR 397 (741)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 8766544
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.56 E-value=2.4e-14 Score=172.93 Aligned_cols=198 Identities=11% Similarity=0.069 Sum_probs=151.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCC----------CCCcEEEEEEc-cCCCeEEEEEeCCCeEEEEECCC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDP----------NEQVLRVLDYS-RNSRHLLVTAGDDGTLHLWDTTG 69 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~----------~~~~V~~Vafs-pdg~~lLaSgs~Dg~V~IWDl~t 69 (648)
+|+|||++|+++ .++.|++||+.. ..+..+..+ +...+..++|+ |+++ .|+.++ ++.|++|++.+
T Consensus 251 ~~SpDG~~la~~-~~~~i~~~d~~~-~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~-~la~~~-~~~i~~~~~~~ 326 (1045)
T 1k32_A 251 HLNTDGRRILFS-KGGSIYIFNPDT-EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGD-LIAFVS-RGQAFIQDVSG 326 (1045)
T ss_dssp EEEESSSCEEEE-ETTEEEEECTTT-CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGG-CEEEEE-TTEEEEECTTS
T ss_pred eEcCCCCEEEEE-eCCEEEEecCCc-eEeeeeccCcccccccccccccccceeeecCCCCC-EEEEEE-cCEEEEEcCCC
Confidence 489999999887 589999999844 444455431 12357789999 9998 455555 78999999987
Q ss_pred CCceeEEeccCCC-CeEEEEEccCCCEEEEEeCCCeEE-EEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEE
Q 006360 70 RSPKVSWLKQHSA-PTAGISFSSDDKIIASVGLDKKLY-TYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVV 147 (648)
Q Consensus 70 ~~~~v~~l~~H~~-~V~slafsPdg~~LaSgs~Dg~I~-IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~ 147 (648)
+. ...+..|.. .+.+++|+ |++.|++++.+..|+ +||+..++......+...+.+++|+|||++|++++.++.|+
T Consensus 327 ~~--~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~ 403 (1045)
T 1k32_A 327 TY--VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIM 403 (1045)
T ss_dssp SB--EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEE
T ss_pred Cc--eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEE
Confidence 76 345677777 89999999 999999999988999 99999887665556778899999999999999999999999
Q ss_pred EEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 148 FYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 148 IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
+||+.++. ...++. .|.+.+.+++|+|||++|++.+...+... .+..++.|++||+..
T Consensus 404 ~~d~~tg~-~~~~~~--~~~~~v~~~~~SpDG~~la~~~~~~~~~~--~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 404 TVDLETGK-PTVIER--SREAMITDFTISDNSRFIAYGFPLKHGET--DGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEETTTCC-EEEEEE--CSSSCCCCEEECTTSCEEEEEEEECSSTT--CSCCEEEEEEEETTT
T ss_pred EEECCCCc-eEEecc--CCCCCccceEECCCCCeEEEEecCccccc--cCCCCCeEEEEECCC
Confidence 99998873 334443 68889999999999998877632110000 011235788888764
No 156
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.54 E-value=3.6e-14 Score=165.15 Aligned_cols=198 Identities=11% Similarity=0.079 Sum_probs=141.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCc----EEEEEEccCCCeEEEEEeCC---------CeEEEEEC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQV----LRVLDYSRNSRHLLVTAGDD---------GTLHLWDT 67 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~----V~~Vafspdg~~lLaSgs~D---------g~V~IWDl 67 (648)
+|+|||++|+++ ||.|++||+.++++...+.++.... ...+.|+|||+ .|+.++.+ +.+++||+
T Consensus 23 ~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~-~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 23 RWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQ-FILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp EECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEET
T ss_pred EECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCC-EEEEEECCeeeEEEccceEEEEEEC
Confidence 489999988886 8999999999999877777644222 23478999999 56666655 56779999
Q ss_pred CCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee--CCCCe-----------------EEE
Q 006360 68 TGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT--YEAPF-----------------SSL 128 (648)
Q Consensus 68 ~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~--h~~~I-----------------~sl 128 (648)
.+++ ...+..|...+..++|+|||+.|+.+. |+.|++||+.+++..++.. +...+ ..+
T Consensus 100 ~~~~--~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~ 176 (740)
T 4a5s_A 100 NKRQ--LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSAL 176 (740)
T ss_dssp TTTE--ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred CCCc--EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcce
Confidence 9887 345777888899999999999999885 6899999999887655432 22222 358
Q ss_pred EEeCCCCEEEEEEcCC------------------------------------eEEEEECCC---CCC-ceEEEeec----
Q 006360 129 AFIDDDWILTAGTSNG------------------------------------RVVFYDIRG---KPQ-PLTVLRAC---- 164 (648)
Q Consensus 129 afsPdG~~Lasgs~DG------------------------------------~V~IWDl~s---~~~-~~~~l~~~---- 164 (648)
.|+|||++|+....|. .|+|||+.+ +.. ....+...
T Consensus 177 ~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~ 256 (740)
T 4a5s_A 177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASML 256 (740)
T ss_dssp EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHH
T ss_pred EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCC
Confidence 9999999999875321 488899987 521 12223211
Q ss_pred CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCC
Q 006360 165 SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 165 ~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
+|...+..++|+|||++++..... ...+..|++||+....
T Consensus 257 ~~~~~~~~~~wspdg~~~~~~~~r--------~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 257 IGDHYLCDVTWATQERISLQWLRR--------IQNYSVMDICDYDESS 296 (740)
T ss_dssp TSCEEEEEEEEEETTEEEEEEEES--------STTEEEEEEEEEETTT
T ss_pred CCCeEEEEEEEeCCCeEEEEEeCC--------CCCEEEEEEEECCCCc
Confidence 377789999999998866553111 1123467777775543
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.54 E-value=4.2e-13 Score=142.33 Aligned_cols=198 Identities=7% Similarity=0.019 Sum_probs=133.4
Q ss_pred CccCCCCE--EEEEE-------------CCCcEEEEECC-CCceeEEEeC---CCCCcEEEEEEccCCCeEEEEEe-CCC
Q 006360 1 MYNCKDEH--LASIS-------------LSGDLILHNLA-SGAKAAELKD---PNEQVLRVLDYSRNSRHLLVTAG-DDG 60 (648)
Q Consensus 1 AFSpdG~~--Lasgs-------------~DG~V~IwDl~-sg~~i~~l~~---~~~~~V~~Vafspdg~~lLaSgs-~Dg 60 (648)
+|+|||++ +++++ .+|.+.+|++. +++....+.. .+...+++++|+|+|+. |+++. .++
T Consensus 89 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~-l~~~~~~~~ 167 (365)
T 1jof_A 89 DADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETY-LYSADLTAN 167 (365)
T ss_dssp CTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSE-EEEEETTTT
T ss_pred EECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCE-EEEEcCCCC
Confidence 58999994 44543 68999999997 4665444331 24567889999999984 55544 468
Q ss_pred eEEEEECC-CCCce-eEEec--cCCCCeEEEEEccCCCEEEEEeC-CCeEEEEeCC--CCceee---Eee---C-----C
Q 006360 61 TLHLWDTT-GRSPK-VSWLK--QHSAPTAGISFSSDDKIIASVGL-DKKLYTYDPG--SRRPSS---CIT---Y-----E 122 (648)
Q Consensus 61 ~V~IWDl~-t~~~~-v~~l~--~H~~~V~slafsPdg~~LaSgs~-Dg~I~IWDl~--tgk~v~---~~~---h-----~ 122 (648)
.|++||+. +++.. +..+. .|...+..++|+||+++|++++. ++.|.+|++. +++... .+. . .
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 247 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRD 247 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBC
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcc
Confidence 99999998 55532 22222 24567999999999999888775 6899999765 565421 121 1 1
Q ss_pred C------CeEEEE-EeCCCCEEEEEEcCC------eEEEEECCCCCCceEEEe-ecCCCCCeeEEEEcc---CCCeEEEe
Q 006360 123 A------PFSSLA-FIDDDWILTAGTSNG------RVVFYDIRGKPQPLTVLR-ACSSSEAVSSLCWQR---AKPVFIDE 185 (648)
Q Consensus 123 ~------~I~sla-fsPdG~~Lasgs~DG------~V~IWDl~s~~~~~~~l~-~~~h~~~VtsLafsp---dg~~Las~ 185 (648)
. .+..++ |+|||++|+++..+. .|.+|++........... ...+...+..++|+| +|++|+++
T Consensus 248 ~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~ 327 (365)
T 1jof_A 248 PETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT 327 (365)
T ss_dssp TTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEE
T ss_pred cccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEE
Confidence 1 478999 999999988776432 899999973223222211 113445567889999 77776554
Q ss_pred ccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 186 TTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 186 ~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
+..++.|.+|++..
T Consensus 328 -----------~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 328 -----------DDQEGWLEIYRWKD 341 (365)
T ss_dssp -----------CSSSCEEEEEEEET
T ss_pred -----------EcCCCeEEEEEEch
Confidence 22357888887754
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.54 E-value=8.1e-14 Score=156.85 Aligned_cols=188 Identities=10% Similarity=0.040 Sum_probs=133.5
Q ss_pred CccCCCCEEEEEEC-CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeC---CCeEEEEECCC--CCcee
Q 006360 1 MYNCKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD---DGTLHLWDTTG--RSPKV 74 (648)
Q Consensus 1 AFSpdG~~Lasgs~-DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~---Dg~V~IWDl~t--~~~~v 74 (648)
+|+|||++||+++. ||.+.||++..+ ....+..++...+..++|+|| + ++++++. +....||.+.. .....
T Consensus 28 ~~~~DG~~la~~s~~~g~~~lw~~~~g-~~~~lt~~~~~~~~~~~~spd-~-~l~~~~~~~g~~~~~l~~~~~~~~g~~~ 104 (582)
T 3o4h_A 28 QGVVDGDKLLVVGFSEGSVNAYLYDGG-ETVKLNREPINSVLDPHYGVG-R-VILVRDVSKGAEQHALFKVNTSRPGEEQ 104 (582)
T ss_dssp EEEETTTEEEEEEEETTEEEEEEEETT-EEEECCSSCCSEECEECTTCS-E-EEEEEECSTTSCCEEEEEEETTSTTCCE
T ss_pred ecCCCCCeEEEEEccCCceeEEEEcCC-CcEeeecccccccccccCCCC-e-EEEEeccCCCCcceEEEEEeccCCCccc
Confidence 48999999998877 999999998544 445565545467888999998 4 7887765 45556655432 22112
Q ss_pred EEeccCCCCeEEEEEccCCCE-EEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcC----CeEEEE
Q 006360 75 SWLKQHSAPTAGISFSSDDKI-IASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSN----GRVVFY 149 (648)
Q Consensus 75 ~~l~~H~~~V~slafsPdg~~-LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~D----G~V~IW 149 (648)
.+..+. .+...+|+|+++. +++...++.+.+||+.+++......+.. .+++|+|||++|++++.+ +.|++|
T Consensus 105 -~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~ 180 (582)
T 3o4h_A 105 -RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTS 180 (582)
T ss_dssp -ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred -cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEE
Confidence 333332 3456788887753 3334444455699999998777665544 889999999999988877 789999
Q ss_pred ECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCC--eEEcCCCCCC
Q 006360 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD--SILMPDPLPS 211 (648)
Q Consensus 150 Dl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~--~IkvWDlr~~ 211 (648)
|+.++.. ..+. .|.+.+..++|+|||++|++. ..++ .|++||+...
T Consensus 181 d~~~g~~--~~l~--~~~~~~~~~~~SpDG~~l~~~------------~~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 181 NLSSGGL--RVFD--SGEGSFSSASISPGMKVTAGL------------ETAREARLVTVDPRDG 228 (582)
T ss_dssp ETTTCCC--EEEC--CSSCEEEEEEECTTSCEEEEE------------ECSSCEEEEEECTTTC
T ss_pred cCCCCCc--eEee--cCCCccccceECCCCCEEEEc------------cCCCeeEEEEEcCCCC
Confidence 9987742 3444 678889999999998887743 3355 7888888643
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.53 E-value=9.6e-13 Score=138.28 Aligned_cols=196 Identities=9% Similarity=0.067 Sum_probs=131.1
Q ss_pred CccCCCCEEEEEECC----CcEEEEECCC--Cce--eEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc
Q 006360 1 MYNCKDEHLASISLS----GDLILHNLAS--GAK--AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (648)
Q Consensus 1 AFSpdG~~Lasgs~D----G~V~IwDl~s--g~~--i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~ 72 (648)
+|+|||++|++++.+ +.|.+|++.. ++. +..+.. +......+++ +++.++++...++.|.+|++.....
T Consensus 56 ~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~-~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~ 132 (361)
T 3scy_A 56 IPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKT-MGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGA 132 (361)
T ss_dssp EECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEEC-SSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSC
T ss_pred EECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEecc-CCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCc
Confidence 589999999998875 7999998765 432 233332 3344556777 7775555555789999999964331
Q ss_pred e--e-E--Eec--------cCCCCeEEEEEccCCCEEEEEe-CCCeEEEEeCCCCc-------e-------eeEeeCCCC
Q 006360 73 K--V-S--WLK--------QHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPGSRR-------P-------SSCITYEAP 124 (648)
Q Consensus 73 ~--v-~--~l~--------~H~~~V~slafsPdg~~LaSgs-~Dg~I~IWDl~tgk-------~-------v~~~~h~~~ 124 (648)
. + . ... .+...+.+++|+|++++|++++ .++.|++|++.... . .........
T Consensus 133 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 212 (361)
T 3scy_A 133 LLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSG 212 (361)
T ss_dssp BCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCC
T ss_pred CcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCC
Confidence 1 1 1 111 1223468899999999766555 47899999887543 1 122345667
Q ss_pred eEEEEEeCCCCEEEEEE-cCCeEEEEECCCCCC-ceEEEee-cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeC-C
Q 006360 125 FSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQ-PLTVLRA-CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAV-G 200 (648)
Q Consensus 125 I~slafsPdG~~Lasgs-~DG~V~IWDl~s~~~-~~~~l~~-~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~-D 200 (648)
+..++|+|||++|++++ .++.|.+||+.++.. .+..+.. ..+...+.+++|+|||++|++. ... +
T Consensus 213 ~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~-----------~~~~~ 281 (361)
T 3scy_A 213 PRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYAS-----------NRLKA 281 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEE-----------ECSSS
T ss_pred CeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEE-----------CCCCC
Confidence 88999999999888877 589999999985421 1111221 2344557899999988776443 233 5
Q ss_pred CeEEcCCCCC
Q 006360 201 DSILMPDPLP 210 (648)
Q Consensus 201 ~~IkvWDlr~ 210 (648)
+.|.+|++..
T Consensus 282 ~~i~v~~~~~ 291 (361)
T 3scy_A 282 DGVAIFKVDE 291 (361)
T ss_dssp CEEEEEEECT
T ss_pred CEEEEEEEcC
Confidence 7889998763
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.53 E-value=5.5e-14 Score=158.21 Aligned_cols=184 Identities=16% Similarity=0.127 Sum_probs=134.3
Q ss_pred CccCCCCEEEEEEC---CCcEEEEECCC---CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 006360 1 MYNCKDEHLASISL---SGDLILHNLAS---GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (648)
Q Consensus 1 AFSpdG~~Lasgs~---DG~V~IwDl~s---g~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v 74 (648)
+|+|| +.+++++. +....||.+.. +... .+.... .+...+|+|+++.++++.+.++.+.|||+.+++.
T Consensus 71 ~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~--~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~-- 144 (582)
T 3o4h_A 71 HYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK--PMRILSGVDTGEAVVFTGATEDRVALYALDGGGL-- 144 (582)
T ss_dssp CTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC--SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE--
T ss_pred cCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCC--CceeeeeCCCCCeEEEEecCCCCceEEEccCCcE--
Confidence 58998 77777765 44455654432 3322 443222 3345789999876666666656666999988763
Q ss_pred EEeccCCCCeEEEEEccCCCEEEEEeCC----CeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCC--eEEE
Q 006360 75 SWLKQHSAPTAGISFSSDDKIIASVGLD----KKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNG--RVVF 148 (648)
Q Consensus 75 ~~l~~H~~~V~slafsPdg~~LaSgs~D----g~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG--~V~I 148 (648)
..+..+.. .+++|+|||++|++++.| +.|++||+.+++......+...+..++|+|||++|+++..++ .|++
T Consensus 145 ~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~ 222 (582)
T 3o4h_A 145 RELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVT 222 (582)
T ss_dssp EEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEE
T ss_pred EEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEE
Confidence 33333433 889999999999988877 789999999998877767888899999999999999888888 8999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEE--------EccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCC
Q 006360 149 YDIRGKPQPLTVLRACSSSEAVSSLC--------WQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (648)
Q Consensus 149 WDl~s~~~~~~~l~~~~h~~~VtsLa--------fspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDl 208 (648)
||+.++.. . .+. .|...+..++ |+|||. +++++..|+.+++|++
T Consensus 223 ~d~~~~~~-~-~~~--~~~~~~~~~~~~~~~~~~~spdg~------------~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 223 VDPRDGSV-E-DLE--LPSKDFSSYRPTAITWLGYLPDGR------------LAVVARREGRSAVFID 274 (582)
T ss_dssp ECTTTCCE-E-ECC--CSCSHHHHHCCSEEEEEEECTTSC------------EEEEEEETTEEEEEET
T ss_pred EcCCCCcE-E-Ecc--CCCcChhhhhhccccceeEcCCCc------------EEEEEEcCCcEEEEEE
Confidence 99988742 2 333 6667777777 999753 3444566899999988
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.53 E-value=7.3e-13 Score=139.78 Aligned_cols=197 Identities=12% Similarity=0.052 Sum_probs=140.2
Q ss_pred CccCCCCEEEEEEC-CC--cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006360 1 MYNCKDEHLASISL-SG--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (648)
Q Consensus 1 AFSpdG~~Lasgs~-DG--~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l 77 (648)
+|+|||++|+.++. +| .|++||+.+++....... +...+..++|+|+++ .|+.+..++.|++||+.+++. ....
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~-~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~g~~-~~~~ 118 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG-RGDNTFGGFLSPDDD-ALFYVKDGRNLMRVDLATLEE-NVVY 118 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS-SCBCSSSCEECTTSS-EEEEEETTTEEEEEETTTCCE-EEEE
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC-CCCCccceEEcCCCC-EEEEEeCCCeEEEEECCCCcc-eeee
Confidence 58999999998887 66 488899987776654443 444443568999998 677778889999999998874 3334
Q ss_pred ccCCCCeEEEE--EccCCCEEEEEe----------------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEeC-
Q 006360 78 KQHSAPTAGIS--FSSDDKIIASVG----------------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFID- 132 (648)
Q Consensus 78 ~~H~~~V~sla--fsPdg~~LaSgs----------------------~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsP- 132 (648)
..+...+.... +++++.+++... .+..|++||+.+++......+...+..++|+|
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~ 198 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPY 198 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETT
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCC
Confidence 44555454444 488999887532 34689999999998877777788899999999
Q ss_pred CCCEEEEEEcC------CeEEEEECCCCCCceEEEeecCCC--CCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEE
Q 006360 133 DDWILTAGTSN------GRVVFYDIRGKPQPLTVLRACSSS--EAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSIL 204 (648)
Q Consensus 133 dG~~Lasgs~D------G~V~IWDl~s~~~~~~~l~~~~h~--~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~Ik 204 (648)
||+.|+....+ ..|++||+.+.. ...+. .+. ..+..++|+|||+.|+..+...+ ..+..|+
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~--~~~~~~~~~~~~~spdg~~l~~~~~~~~-------~~~~~l~ 267 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKVK--THAEGESCTHEFWVPDGSALVYVSYLKG-------SPDRFIY 267 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSCC--CEESC--CCCTTEEEEEEEECTTSSCEEEEEEETT-------CCCEEEE
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEee--eCCCCcccccceECCCCCEEEEEecCCC-------CCcceEE
Confidence 99999887763 378888887652 23333 233 35788999999987766422110 0122488
Q ss_pred cCCCCCC
Q 006360 205 MPDPLPS 211 (648)
Q Consensus 205 vWDlr~~ 211 (648)
+||+...
T Consensus 268 ~~d~~~g 274 (388)
T 3pe7_A 268 SADPETL 274 (388)
T ss_dssp EECTTTC
T ss_pred EEecCCC
Confidence 8988643
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.52 E-value=6.3e-13 Score=140.95 Aligned_cols=200 Identities=13% Similarity=0.081 Sum_probs=134.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECC-CCceeEEEeC-CCCCcEEEEEEccCCCe-EEEEEe-------------CCCeEEE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLA-SGAKAAELKD-PNEQVLRVLDYSRNSRH-LLVTAG-------------DDGTLHL 64 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~-sg~~i~~l~~-~~~~~V~~Vafspdg~~-lLaSgs-------------~Dg~V~I 64 (648)
+|+|||++|++++.+ .|.+|++. +++....... .... ..+++|+|+++. +++++. .++.+.+
T Consensus 46 a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 46 TFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGH-PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSS-GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCC-CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence 589999999988887 99999987 7766543321 1122 345889999985 344442 6899999
Q ss_pred EECCC-CCceeEEec----cCCCCeEEEEEccCCCEEEEEeC-CCeEEEEeCC-CCceee--Eee---CCCCeEEEEEeC
Q 006360 65 WDTTG-RSPKVSWLK----QHSAPTAGISFSSDDKIIASVGL-DKKLYTYDPG-SRRPSS--CIT---YEAPFSSLAFID 132 (648)
Q Consensus 65 WDl~t-~~~~v~~l~----~H~~~V~slafsPdg~~LaSgs~-Dg~I~IWDl~-tgk~v~--~~~---h~~~I~slafsP 132 (648)
|++.. +.. ...+. .+...+.+++|+|||++|+++.. ++.|++||+. +++... .+. +...+..++|+|
T Consensus 124 ~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp 202 (365)
T 1jof_A 124 FSVSETGKL-EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP 202 (365)
T ss_dssp EEECTTCCE-EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT
T ss_pred EccCCCCcC-cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC
Confidence 99974 432 22222 35567999999999998887764 6799999998 776532 232 356789999999
Q ss_pred CCCEEEEEEc-CCeEEEEECCC--CCCc--eEEEeec-----CCCC------CeeEEE-EccCCCeEEEeccCCCCeEEE
Q 006360 133 DDWILTAGTS-NGRVVFYDIRG--KPQP--LTVLRAC-----SSSE------AVSSLC-WQRAKPVFIDETTCKAETALL 195 (648)
Q Consensus 133 dG~~Lasgs~-DG~V~IWDl~s--~~~~--~~~l~~~-----~h~~------~VtsLa-fspdg~~Las~~~~~~~~~lv 195 (648)
||++|++++. ++.|.+|++.. +... ...+... +|.. .+.+++ |+|||++|++.....+.
T Consensus 203 dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~---- 278 (365)
T 1jof_A 203 TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKF---- 278 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST----
T ss_pred CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCC----
Confidence 9999988875 68999998763 3211 1122221 1122 588999 99998877554110000
Q ss_pred EeeCCCeEEcCCCC
Q 006360 196 GGAVGDSILMPDPL 209 (648)
Q Consensus 196 s~s~D~~IkvWDlr 209 (648)
...+.|.+|++.
T Consensus 279 --~~~~~i~v~~~~ 290 (365)
T 1jof_A 279 --ELQGYIAGFKLR 290 (365)
T ss_dssp --TSCCEEEEEEEC
T ss_pred --CCCCeEEEEEEC
Confidence 001389999886
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.50 E-value=2.7e-14 Score=164.56 Aligned_cols=177 Identities=12% Similarity=0.095 Sum_probs=124.9
Q ss_pred CccCCCCEEEEEEC---------CCcEEEEECCCCcee--EEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Q 006360 1 MYNCKDEHLASISL---------SGDLILHNLASGAKA--AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG 69 (648)
Q Consensus 1 AFSpdG~~Lasgs~---------DG~V~IwDl~sg~~i--~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t 69 (648)
+|||||++|++++. ++.|++||+.+++.+ ..+. ..+..++|+|||+ .|+.+. |+.|++||+.+
T Consensus 66 ~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~----~~~~~~~~SPDG~-~la~~~-~~~i~~~~~~~ 139 (719)
T 1z68_A 66 GLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP----RPIQYLCWSPVGS-KLAYVY-QNNIYLKQRPG 139 (719)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC----SSBCCEEECSSTT-CEEEEE-TTEEEEESSTT
T ss_pred EECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC----cccccceECCCCC-EEEEEE-CCeEEEEeCCC
Confidence 48999999998876 689999999888763 2222 3467799999999 455554 78999999987
Q ss_pred CCceeEEeccCCCCe-----------------EEEEEccCCCEEEEEeCCC-----------------------------
Q 006360 70 RSPKVSWLKQHSAPT-----------------AGISFSSDDKIIASVGLDK----------------------------- 103 (648)
Q Consensus 70 ~~~~v~~l~~H~~~V-----------------~slafsPdg~~LaSgs~Dg----------------------------- 103 (648)
+........++...| .+++|+|||++|++++.|.
T Consensus 140 g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~ 219 (719)
T 1z68_A 140 DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGA 219 (719)
T ss_dssp SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTS
T ss_pred CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCC
Confidence 764221223333322 4899999999999988652
Q ss_pred -----eEEEEeCCCCcee---eEe------eCCCCeEEEEEeCCCCEEEEEEcC----CeEEEEE----CCCCCCceEEE
Q 006360 104 -----KLYTYDPGSRRPS---SCI------TYEAPFSSLAFIDDDWILTAGTSN----GRVVFYD----IRGKPQPLTVL 161 (648)
Q Consensus 104 -----~I~IWDl~tgk~v---~~~------~h~~~I~slafsPdG~~Lasgs~D----G~V~IWD----l~s~~~~~~~l 161 (648)
.|++||+.+++.. ... .+...+..++|+||++++++.... ..|++|| +.++.. ..++
T Consensus 220 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~-~~~~ 298 (719)
T 1z68_A 220 KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC-PKTQ 298 (719)
T ss_dssp CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC-CGGG
T ss_pred CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce-EEEE
Confidence 7899999988753 221 366778999999998777765432 2488899 765422 1222
Q ss_pred e--ecCCCCCee-----EEEEccCCCeEEE
Q 006360 162 R--ACSSSEAVS-----SLCWQRAKPVFID 184 (648)
Q Consensus 162 ~--~~~h~~~Vt-----sLafspdg~~Las 184 (648)
. ...|...+. .+.|+|||+.++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 299 EHIEESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp EEEEECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred ecccccCCceEccccCCccEECCCCCeEEE
Confidence 0 025666666 8899999886544
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.50 E-value=4.9e-14 Score=162.42 Aligned_cols=178 Identities=16% Similarity=0.157 Sum_probs=129.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCC---cEEEEEEccCCCeEEEEEeC---------CCeEEEEECC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQ---VLRVLDYSRNSRHLLVTAGD---------DGTLHLWDTT 68 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~---~V~~Vafspdg~~lLaSgs~---------Dg~V~IWDl~ 68 (648)
+|+|||++++ .+.|+.|++||+.+++....+.. +.. .+.+++|+|||+ +|+.++. ++.|++||+.
T Consensus 22 ~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~SpDg~-~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 22 NWISGQEYLH-QSADNNIVLYNIETGQSYTILSN-RTMKSVNASNYGLSPDRQ-FVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp EESSSSEEEE-ECTTSCEEEEESSSCCEEEEECH-HHHHTTTCSEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred EECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEcc-ccccccceeeEEECCCCC-eEEEEecCceeEEeecceEEEEEECC
Confidence 4899996555 55799999999998887766553 222 377899999999 5666554 6899999998
Q ss_pred CCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee--CCCCe-----------------EEEE
Q 006360 69 GRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT--YEAPF-----------------SSLA 129 (648)
Q Consensus 69 t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~--h~~~I-----------------~sla 129 (648)
+++.. ........+.+++|+|||++|+++. |+.|++||+.+++...+.. +...| .+++
T Consensus 99 ~g~~~--~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 99 NGEFV--RGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TTEEC--CSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred CCccc--cceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 87631 0011235688999999999999886 7899999999887765432 22222 4899
Q ss_pred EeCCCCEEEEEEcCC----------------------------------eEEEEECCCCCCc-eEEEe----ecCCCCCe
Q 006360 130 FIDDDWILTAGTSNG----------------------------------RVVFYDIRGKPQP-LTVLR----ACSSSEAV 170 (648)
Q Consensus 130 fsPdG~~Lasgs~DG----------------------------------~V~IWDl~s~~~~-~~~l~----~~~h~~~V 170 (648)
|+|||++|++++.|. .|++||+.++... ...+. ..+|...+
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF 255 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE
Confidence 999999999988652 7889999876321 01111 12577889
Q ss_pred eEEEEccCCCeEEE
Q 006360 171 SSLCWQRAKPVFID 184 (648)
Q Consensus 171 tsLafspdg~~Las 184 (648)
.+++|+||++++++
T Consensus 256 ~~~~~SpD~~~~~~ 269 (719)
T 1z68_A 256 SWLTWVTDERVCLQ 269 (719)
T ss_dssp EEEEESSSSEEEEE
T ss_pred EEeEEeCCCeEEEE
Confidence 99999998766554
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.50 E-value=2.2e-12 Score=135.10 Aligned_cols=202 Identities=11% Similarity=0.095 Sum_probs=151.5
Q ss_pred CccCCCCEEEEEECC------------------------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEE
Q 006360 1 MYNCKDEHLASISLS------------------------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTA 56 (648)
Q Consensus 1 AFSpdG~~Lasgs~D------------------------G~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSg 56 (648)
||+++|+++++...+ +.|++||..+++.+..+...+......|+++++++ ++++.
T Consensus 30 a~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d 108 (329)
T 3fvz_A 30 ALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-YWVTD 108 (329)
T ss_dssp EECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-EEEEE
T ss_pred EECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-EEEEE
Confidence 578999988887766 47999999889887766544455678899999998 88888
Q ss_pred eCCCeEEEEECCCCCceeEEe---------ccCCCCeEEEEEcc-CCCEEEEEe-CCCeEEEEeCCCCceeeEeeC----
Q 006360 57 GDDGTLHLWDTTGRSPKVSWL---------KQHSAPTAGISFSS-DDKIIASVG-LDKKLYTYDPGSRRPSSCITY---- 121 (648)
Q Consensus 57 s~Dg~V~IWDl~t~~~~v~~l---------~~H~~~V~slafsP-dg~~LaSgs-~Dg~I~IWDl~tgk~v~~~~h---- 121 (648)
..++.|++||..+....+..+ ..+-....+|+|+| ++.++++.+ .++.|++|| .+++.+..+..
T Consensus 109 ~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~ 187 (329)
T 3fvz_A 109 VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSG 187 (329)
T ss_dssp TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCS
T ss_pred CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCC
Confidence 889999999987663223444 34455789999999 888888886 689999999 56776666631
Q ss_pred -------CCCeEEEEEeCC-CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeE
Q 006360 122 -------EAPFSSLAFIDD-DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETA 193 (648)
Q Consensus 122 -------~~~I~slafsPd-G~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~ 193 (648)
......++++|+ +.++++...++.|++||..++ +.+..+....+...+.+++|+| +..++.. +.+
T Consensus 188 ~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~-----g~~ 260 (329)
T 3fvz_A 188 SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK-EFVREIKHASFGRNVFAISYIP-GFLFAVN-----GKP 260 (329)
T ss_dssp SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC-CEEEEECCTTTTTCEEEEEEET-TEEEEEE-----CCC
T ss_pred CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC-cEEEEEeccccCCCcceeeecC-CEEEEeC-----CCE
Confidence 123789999998 777777778899999999855 4455555456778899999999 4444433 235
Q ss_pred EEEeeCCCeEEcCCCCCC
Q 006360 194 LLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 194 lvs~s~D~~IkvWDlr~~ 211 (648)
+++...+..|++||+...
T Consensus 261 ~v~~~~~~~v~~~~~~~g 278 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSG 278 (329)
T ss_dssp CTTCSCCCCEEEEETTTC
T ss_pred EeccCCCcEEEEEEcCCC
Confidence 555566778999987543
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.49 E-value=6.3e-12 Score=127.60 Aligned_cols=189 Identities=11% Similarity=0.100 Sum_probs=137.7
Q ss_pred CCCCEEEEEEC-CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec--cC
Q 006360 4 CKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK--QH 80 (648)
Q Consensus 4 pdG~~Lasgs~-DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~--~H 80 (648)
++++++++... ++.|++|| .+++.+..+...+...+..+++.++++ ++++...++.|++||..+.. +..+. .+
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~--~~~~~~~~~ 162 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGNV--LHKFGCSKH 162 (286)
T ss_dssp TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSCE--EEEEECTTT
T ss_pred CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCCE--EEEeCCCCc
Confidence 55655555533 78999999 578887777654556788999999997 77777788999999976543 33332 45
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeC---CCCeEEEEEeCCCCEEEEEEcCC-eEEEEECCCCCC
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---EAPFSSLAFIDDDWILTAGTSNG-RVVFYDIRGKPQ 156 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h---~~~I~slafsPdG~~Lasgs~DG-~V~IWDl~s~~~ 156 (648)
...+.+++++++++++++...++.|++||.. ++.+..+.. ...+..++++++|+++++...++ .|.+||....
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~-- 239 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ-- 239 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC--
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC--
Confidence 5678999999999988888889999999974 455555532 25789999999999888887776 9999996543
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCC
Q 006360 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (648)
Q Consensus 157 ~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~ 212 (648)
.+..+........+.+++|+++| .++++ +.|+.|++|++....
T Consensus 240 ~~~~~~~~~~~~~~~~i~~~~~g------------~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 240 LISALESKVKHAQCFDVALMDDG------------SVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEEEEEESSCCSCEEEEEEETTT------------EEEEE-ETTTEEEEEECSCCC
T ss_pred EEEEEcccCCCCcceeEEECCCC------------cEEEE-CCCCeEEEEEccccc
Confidence 34444433334457889998854 34444 358999999876543
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.42 E-value=1.9e-12 Score=150.53 Aligned_cols=178 Identities=7% Similarity=-0.022 Sum_probs=125.0
Q ss_pred ccCCCCEEEEEECC---------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc
Q 006360 2 YNCKDEHLASISLS---------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (648)
Q Consensus 2 FSpdG~~Lasgs~D---------G~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~ 72 (648)
|||||++|+.++.+ +.+++||+.+++... +.. +...+..++|+|||+. |+.+ .|+.|++||+.++..
T Consensus 69 ~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~-~~~~~~~~~~SPdG~~-la~~-~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EER-IPNNTQWVTWSPVGHK-LAYV-WNNDIYVKIEPNLPS 144 (740)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSC-CCTTEEEEEECSSTTC-EEEE-ETTEEEEESSTTSCC
T ss_pred ECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-ccc-CCCcceeeEECCCCCE-EEEE-ECCeEEEEECCCCce
Confidence 69999999988876 567899998887653 443 4556888999999994 5554 468999999987764
Q ss_pred eeEEeccCCCCe-----------------EEEEEccCCCEEEEEeCCC--------------------------------
Q 006360 73 KVSWLKQHSAPT-----------------AGISFSSDDKIIASVGLDK-------------------------------- 103 (648)
Q Consensus 73 ~v~~l~~H~~~V-----------------~slafsPdg~~LaSgs~Dg-------------------------------- 103 (648)
......++...+ ..+.|+|||++|+.++.|.
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~ 224 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV 224 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc
Confidence 322223333333 3489999999999875332
Q ss_pred ----eEEEEeCCC---C---ceeeEee------CCCCeEEEEEeCCCCEEEEEEc----CCeEEEEECCCCC----C-ce
Q 006360 104 ----KLYTYDPGS---R---RPSSCIT------YEAPFSSLAFIDDDWILTAGTS----NGRVVFYDIRGKP----Q-PL 158 (648)
Q Consensus 104 ----~I~IWDl~t---g---k~v~~~~------h~~~I~slafsPdG~~Lasgs~----DG~V~IWDl~s~~----~-~~ 158 (648)
.|++||+.+ + +...... +...+..++|+|||++++.... +..|++||+.++. + ..
T Consensus 225 ~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~ 304 (740)
T 4a5s_A 225 NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVA 304 (740)
T ss_dssp CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGG
T ss_pred CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEE
Confidence 588999998 7 4433332 6667899999999997776543 2369999998874 1 11
Q ss_pred EEEeecCCCCCee-----EEEEccCCCeEE
Q 006360 159 TVLRACSSSEAVS-----SLCWQRAKPVFI 183 (648)
Q Consensus 159 ~~l~~~~h~~~Vt-----sLafspdg~~La 183 (648)
..+....|...|. .+.|+|||+.++
T Consensus 305 ~~l~~~~~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 305 RQHIEMSTTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp GCEEEECSSSCSSSSSCCCCEECTTSSEEE
T ss_pred EEeeeccCCceEccCcCCCceEcCCCCEEE
Confidence 2221124555554 789999998766
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.39 E-value=1.5e-11 Score=129.71 Aligned_cols=202 Identities=9% Similarity=-0.040 Sum_probs=132.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEE--EccCCCeEEEEE----------------------
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLD--YSRNSRHLLVTA---------------------- 56 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Va--fspdg~~lLaSg---------------------- 56 (648)
+|+|||++|+.++.++.|++||+.+++....+.. +...+.... ++++++ +++..
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 87 FLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV-PAEWVGYGTWVANSDCT-KLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSS-EEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec-hhhcccccceeECCCCC-eeccccccCcccccccccchhhhhhcc
Confidence 4899999999999999999999998887665554 334443333 488988 45432
Q ss_pred eCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcc-CCCEEEEEeCC------CeEEEEeCCCCceeeEeeCC--CCeEE
Q 006360 57 GDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS-DDKIIASVGLD------KKLYTYDPGSRRPSSCITYE--APFSS 127 (648)
Q Consensus 57 s~Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafsP-dg~~LaSgs~D------g~I~IWDl~tgk~v~~~~h~--~~I~s 127 (648)
..+..|++||+.+++ ...+..+...+..++|+| |++.|+.+..+ ..|++||+..++......+. ..+..
T Consensus 165 ~~~~~l~~~d~~~g~--~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGE--STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTH 242 (388)
T ss_dssp CCCEEEEEEETTTCC--EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEE
T ss_pred CCcceEEEEECCCCc--eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCccccc
Confidence 234789999998886 445566777899999999 99999887764 37889998776655544444 25778
Q ss_pred EEEeCCCCEEEEEEc-CC----eEEEEECCCCCCceEEEeecCCCC---CeeEEEEccCCCeEEEeccCCCCeEEEEeeC
Q 006360 128 LAFIDDDWILTAGTS-NG----RVVFYDIRGKPQPLTVLRACSSSE---AVSSLCWQRAKPVFIDETTCKAETALLGGAV 199 (648)
Q Consensus 128 lafsPdG~~Lasgs~-DG----~V~IWDl~s~~~~~~~l~~~~h~~---~VtsLafspdg~~Las~~~~~~~~~lvs~s~ 199 (648)
++|+|||+.|+..+. ++ .|++||+.+++. ..+....++.. ....++|+|||++|+....... ......
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---~~~~~~ 318 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDS---GYKIEN 318 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-EEEEEECCEEEEEECTTSSEEEEEECCC---------------CC
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCCce-EEEEcCCCceeeeecCCCCeEccCCCcceeEeeecc---ccccCC
Confidence 899999997765443 22 399999998742 12212111000 0112368898888775421000 011234
Q ss_pred CCeEEcCCCCC
Q 006360 200 GDSILMPDPLP 210 (648)
Q Consensus 200 D~~IkvWDlr~ 210 (648)
+..|++||+..
T Consensus 319 ~~~i~~~d~~~ 329 (388)
T 3pe7_A 319 DPFLYVFNMKN 329 (388)
T ss_dssp CCEEEEEETTT
T ss_pred CCEEEEEeccC
Confidence 67888898764
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.38 E-value=7.1e-11 Score=119.75 Aligned_cols=189 Identities=8% Similarity=0.097 Sum_probs=135.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeC-----CCCCcEEEEEEc-cCCCeEEEEEeC-CCeEEEEECCCCCce
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD-----PNEQVLRVLDYS-RNSRHLLVTAGD-DGTLHLWDTTGRSPK 73 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~-----~~~~~V~~Vafs-pdg~~lLaSgs~-Dg~V~IWDl~t~~~~ 73 (648)
+++++|+++++...++.|++||.. ++.+..+.. .+...+..+++. +++. ++++... ++.|++||..+ ..
T Consensus 36 ~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~~~~~i~~~d~~g-~~- 111 (286)
T 1q7f_A 36 AVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERSPTHQIQIYNQYG-QF- 111 (286)
T ss_dssp EECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECGGGCEEEEECTTS-CE-
T ss_pred EECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCCCCCEEEEECCCC-cE-
Confidence 467889988887888999999975 776666642 123457889994 5654 5555533 89999999543 32
Q ss_pred eEEe-ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee---CCCCeEEEEEeCCCCEEEEEEcCCeEEEE
Q 006360 74 VSWL-KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT---YEAPFSSLAFIDDDWILTAGTSNGRVVFY 149 (648)
Q Consensus 74 v~~l-~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~---h~~~I~slafsPdG~~Lasgs~DG~V~IW 149 (648)
+..+ ..+...+.+++++++++++++...++.|++||.. ++.+..+. +...+.+++++++|+++++...++.|++|
T Consensus 112 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 190 (286)
T 1q7f_A 112 VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVF 190 (286)
T ss_dssp EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEE
T ss_pred EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEE
Confidence 3333 3345678999999999988888888999999964 55555553 34568999999999987777788999999
Q ss_pred ECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCC-eEEcCCC
Q 006360 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD-SILMPDP 208 (648)
Q Consensus 150 Dl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~-~IkvWDl 208 (648)
|.... .+..+...++...+.+|+++++|+++++ ...++ .|.+||.
T Consensus 191 ~~~g~--~~~~~~~~g~~~~p~~i~~d~~G~l~v~------------~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 191 NYEGQ--YLRQIGGEGITNYPIGVGINSNGEILIA------------DNHNNFNLTIFTQ 236 (286)
T ss_dssp ETTCC--EEEEESCTTTSCSEEEEEECTTCCEEEE------------ECSSSCEEEEECT
T ss_pred cCCCC--EEEEEccCCccCCCcEEEECCCCCEEEE------------eCCCCEEEEEECC
Confidence 98543 2333432233467899999987654444 34454 8888885
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.38 E-value=9.5e-11 Score=121.36 Aligned_cols=194 Identities=12% Similarity=0.119 Sum_probs=134.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCC----CeEEEEECCCCCceeEE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD----GTLHLWDTTGRSPKVSW 76 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~D----g~V~IWDl~t~~~~v~~ 76 (648)
+|+++|++++++..++.|++||..+++....... +...+.+++|+++++ ++++...+ +.|++||..+.... ..
T Consensus 51 ~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~~-~~ 127 (333)
T 2dg1_A 51 NFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS-HKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNLQ-DI 127 (333)
T ss_dssp EECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC-SSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSCE-EE
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeC-CCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEEE-EE
Confidence 4788999877888889999999987776554432 456789999999997 66666665 68999999887642 12
Q ss_pred ec--cCCCCeEEEEEccCCCEEEEEeC------CCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEE-EcCCeEE
Q 006360 77 LK--QHSAPTAGISFSSDDKIIASVGL------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAG-TSNGRVV 147 (648)
Q Consensus 77 l~--~H~~~V~slafsPdg~~LaSgs~------Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasg-s~DG~V~ 147 (648)
+. .+...+++++++|+++++++... .+.|+.||..+++..........+..++|+|||++|+++ ..++.|+
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~ 207 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLH 207 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEE
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEE
Confidence 22 34567999999999988877654 357888887766655444444568899999999866554 4578999
Q ss_pred EEECCCCCCceEEE-----eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 148 FYDIRGKPQPLTVL-----RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 148 IWDl~s~~~~~~~l-----~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
+||+......+..+ ........+..++++++|++ +++...++.|.+||+.
T Consensus 208 ~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l------------~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 208 RIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNL------------YVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCE------------EEEEETTTEEEEECTT
T ss_pred EEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCE------------EEEEcCCCEEEEECCC
Confidence 99996432222211 11111146778888886544 3444456788888873
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.36 E-value=4.9e-11 Score=121.92 Aligned_cols=187 Identities=11% Similarity=0.065 Sum_probs=133.4
Q ss_pred CccCCCC-EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006360 1 MYNCKDE-HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (648)
Q Consensus 1 AFSpdG~-~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~ 79 (648)
+|+++|+ +++++..++.|++||..++ ...+.. +...+.+++|+++++ ++++...++.|.+||..++... .....
T Consensus 34 ~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~-~~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g~~~-~~~~~ 108 (296)
T 3e5z_A 34 VYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH-PSHHQNGHCLNKQGH-LIACSHGLRRLERQREPGGEWE-SIADS 108 (296)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES-SCSSEEEEEECTTCC-EEEEETTTTEEEEECSTTCCEE-EEECE
T ss_pred eEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC-CCCCcceeeECCCCc-EEEEecCCCeEEEEcCCCCcEE-EEeec
Confidence 5889998 6777888899999998766 555554 556788999999998 6666666789999999776632 22211
Q ss_pred ----CCCCeEEEEEccCCCEEEEE----e-------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEE
Q 006360 80 ----HSAPTAGISFSSDDKIIASV----G-------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (648)
Q Consensus 80 ----H~~~V~slafsPdg~~LaSg----s-------------~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~La 138 (648)
....+++++++|+|+++++. . ..+.|+.+|.. ++......+......++|+|||++|+
T Consensus 109 ~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv 187 (296)
T 3e5z_A 109 FEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLV 187 (296)
T ss_dssp ETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEE
T ss_pred cCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEE
Confidence 12356789999999988873 2 13467777766 55555555667789999999999997
Q ss_pred EEEcCCeEEEEECCCCCCc---eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 139 AGTSNGRVVFYDIRGKPQP---LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 139 sgs~DG~V~IWDl~s~~~~---~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
+...++.|++||+...... ...+ ..+...+.+++++++|++.++ . ++.|.+||..
T Consensus 188 ~~~~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G~l~v~------------~--~~~v~~~~~~ 245 (296)
T 3e5z_A 188 SDTGDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGGLIWAS------------A--GDGVHVLTPD 245 (296)
T ss_dssp EETTTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTSCEEEE------------E--TTEEEEECTT
T ss_pred EeCCCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCCCEEEE------------c--CCeEEEECCC
Confidence 7777899999999732222 2233 235566778899886554333 3 6778888874
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.35 E-value=6e-12 Score=132.44 Aligned_cols=198 Identities=11% Similarity=0.015 Sum_probs=132.2
Q ss_pred CccCCCCEEEEEECC---CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006360 1 MYNCKDEHLASISLS---GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (648)
Q Consensus 1 AFSpdG~~Lasgs~D---G~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l 77 (648)
+|+|||++|+....+ ..|++||+.+++... +..........+.|+|+++ .|+.++.++.|++||+.+++. ....
T Consensus 42 ~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~~~~-~~~~ 118 (396)
T 3c5m_A 42 CFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-LTEGKGDNTFGGFISTDER-AFFYVKNELNLMKVDLETLEE-QVIY 118 (396)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-CCCSSCBCTTTCEECTTSS-EEEEEETTTEEEEEETTTCCE-EEEE
T ss_pred cCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-eecCCCCccccceECCCCC-EEEEEEcCCcEEEEECCCCCc-EEEE
Confidence 589999998877543 368899987776543 3332333333368999998 677778888999999988764 2233
Q ss_pred ccCCCCeEE-------------------EEEccCCCEEEEE-----eCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeC-
Q 006360 78 KQHSAPTAG-------------------ISFSSDDKIIASV-----GLDKKLYTYDPGSRRPSSCITYEAPFSSLAFID- 132 (648)
Q Consensus 78 ~~H~~~V~s-------------------lafsPdg~~LaSg-----s~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsP- 132 (648)
..+...... ++|+|+++.++.+ ..+..|++||+.+++......+...+..+.|+|
T Consensus 119 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~ 198 (396)
T 3c5m_A 119 TVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPF 198 (396)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETT
T ss_pred ecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCC
Confidence 333332222 3567777766554 356689999999988777777788899999999
Q ss_pred CCCEEEEEEcC------CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcC
Q 006360 133 DDWILTAGTSN------GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMP 206 (648)
Q Consensus 133 dG~~Lasgs~D------G~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvW 206 (648)
++..|+..+.+ ..|++||+.+.. ...+........+..++|+|+|++|+......+ ..++.|++|
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~-------~~~~~l~~~ 269 (396)
T 3c5m_A 199 DDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKG-------QTDRVIYKA 269 (396)
T ss_dssp EEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEECTTSSCEEEEEEETT-------TCCEEEEEE
T ss_pred CCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccccceEECCCCCEEEEEecCCC-------CccceEEEE
Confidence 78877776653 368899987652 122221111235788999999988766522111 112448888
Q ss_pred CCCC
Q 006360 207 DPLP 210 (648)
Q Consensus 207 Dlr~ 210 (648)
|+..
T Consensus 270 d~~~ 273 (396)
T 3c5m_A 270 NPET 273 (396)
T ss_dssp CTTT
T ss_pred ECCC
Confidence 8754
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.33 E-value=1.4e-11 Score=140.32 Aligned_cols=179 Identities=9% Similarity=-0.011 Sum_probs=125.4
Q ss_pred ccCCCCEEEEE--ECCCcEEEEECCCCceeEEEeCCCCCcEE---------EEEEc--cCCCe-EEEEEeCCCeEEEEEC
Q 006360 2 YNCKDEHLASI--SLSGDLILHNLASGAKAAELKDPNEQVLR---------VLDYS--RNSRH-LLVTAGDDGTLHLWDT 67 (648)
Q Consensus 2 FSpdG~~Lasg--s~DG~V~IwDl~sg~~i~~l~~~~~~~V~---------~Vafs--pdg~~-lLaSgs~Dg~V~IWDl 67 (648)
|++++-+++.. +.++...||....+.....+..+. ..+. .+.|+ ||++. ++++...+..|++|++
T Consensus 31 ~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~ 109 (662)
T 3azo_A 31 AVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAP-WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEP 109 (662)
T ss_dssp EETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTT-CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECT
T ss_pred EcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCC-ccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcC
Confidence 55554455555 447889999865555556666533 3333 35565 99996 4544444677888887
Q ss_pred C--C-CCceeEEecc-----CCCCeEEEEEccCCCEEEEEeCC----------CeEEEEeCCC------CceeeEe-eCC
Q 006360 68 T--G-RSPKVSWLKQ-----HSAPTAGISFSSDDKIIASVGLD----------KKLYTYDPGS------RRPSSCI-TYE 122 (648)
Q Consensus 68 ~--t-~~~~v~~l~~-----H~~~V~slafsPdg~~LaSgs~D----------g~I~IWDl~t------gk~v~~~-~h~ 122 (648)
. + +. ...+.. |...+.+++|+|||+.|++++.| ..|++||+.+ ++...+. .+.
T Consensus 110 ~~~g~~~--~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~ 187 (662)
T 3azo_A 110 DAPGGAV--PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH 187 (662)
T ss_dssp TSTTCCC--CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCS
T ss_pred CCCCCCC--CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCC
Confidence 6 3 44 344555 66778999999999999999887 5899999998 6666555 556
Q ss_pred CCeEEEEEeCCCCEEEEEEcCC--------eEEEEECCC-CC--CceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006360 123 APFSSLAFIDDDWILTAGTSNG--------RVVFYDIRG-KP--QPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 123 ~~I~slafsPdG~~Lasgs~DG--------~V~IWDl~s-~~--~~~~~l~~~~h~~~VtsLafspdg~~Las~ 185 (648)
..+..++|+|||++|+..+.++ .|++||+.. +. ....+.. .|...+..++|+|||+++++.
T Consensus 188 ~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~--~~~~~~~~~~~spdg~l~~~~ 259 (662)
T 3azo_A 188 RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG--GPEEAIAQAEWAPDGSLIVAT 259 (662)
T ss_dssp SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE--ETTBCEEEEEECTTSCEEEEE
T ss_pred CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC--CCCceEcceEECCCCeEEEEE
Confidence 6788899999999999887553 799999984 41 2222222 456889999999987744433
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.33 E-value=6e-11 Score=124.03 Aligned_cols=192 Identities=7% Similarity=0.088 Sum_probs=136.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-eeEEEe--------CCCCCcEEEEEEcc-CCCeEEEEEe-CCCeEEEEECCC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGA-KAAELK--------DPNEQVLRVLDYSR-NSRHLLVTAG-DDGTLHLWDTTG 69 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~-~i~~l~--------~~~~~~V~~Vafsp-dg~~lLaSgs-~Dg~V~IWDl~t 69 (648)
+|+++|+++++...++.|++||..... .+..+. ..+......|+|++ ++. ++++.+ .++.|++||..+
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~~~g 175 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFSPSG 175 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEECTTS
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEcCCC
Confidence 478899988888888999999974332 555553 12334578899999 565 777775 689999999554
Q ss_pred CCceeEEecc----------CCCCeEEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeEee---CCCCeEEEEEeCCCC
Q 006360 70 RSPKVSWLKQ----------HSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCIT---YEAPFSSLAFIDDDW 135 (648)
Q Consensus 70 ~~~~v~~l~~----------H~~~V~slafsPd-g~~LaSgs~Dg~I~IWDl~tgk~v~~~~---h~~~I~slafsPdG~ 135 (648)
.. +..+.. +-....+|+++|+ +.++++...++.|++||..+++.+..+. +...+..++|+| +.
T Consensus 176 ~~--~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~ 252 (329)
T 3fvz_A 176 KF--VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GF 252 (329)
T ss_dssp CE--EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TE
T ss_pred CE--EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CE
Confidence 32 333322 2234899999998 7777888888999999999888887773 556788999999 33
Q ss_pred EEEE-------EEcCCeEEEEECCCCCCceEEEe-ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCC
Q 006360 136 ILTA-------GTSNGRVVFYDIRGKPQPLTVLR-ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (648)
Q Consensus 136 ~Las-------gs~DG~V~IWDl~s~~~~~~~l~-~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWD 207 (648)
.++. ...+..|++||+.++. .+..+. ...+...+.+|+|+++| .++++...++.|++|+
T Consensus 253 ~~~~~g~~~v~~~~~~~v~~~~~~~g~-~~~~~~~~~~~~~~p~~ia~~~dG------------~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 253 LFAVNGKPYFGDQEPVQGFVMNFSSGE-IIDVFKPVRKHFDMPHDIVASEDG------------TVYIGDAHTNTVWKFT 319 (329)
T ss_dssp EEEEECCCCTTCSCCCCEEEEETTTCC-EEEEECCSSSCCSSEEEEEECTTS------------EEEEEESSSCCEEEEE
T ss_pred EEEeCCCEEeccCCCcEEEEEEcCCCe-EEEEEcCCCCccCCeeEEEECCCC------------CEEEEECCCCEEEEEe
Confidence 3333 2334589999998873 333332 12566779999999965 4455556688888888
Q ss_pred CC
Q 006360 208 PL 209 (648)
Q Consensus 208 lr 209 (648)
+.
T Consensus 320 ~~ 321 (329)
T 3fvz_A 320 LT 321 (329)
T ss_dssp EE
T ss_pred CC
Confidence 75
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.32 E-value=1.9e-11 Score=139.20 Aligned_cols=165 Identities=16% Similarity=0.090 Sum_probs=118.6
Q ss_pred CccCCCCEEEEEECC----------CcEEEEECCC------CceeEEEe-CCCCCcEEEEEEccCCCeEEEEEeCC----
Q 006360 1 MYNCKDEHLASISLS----------GDLILHNLAS------GAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGDD---- 59 (648)
Q Consensus 1 AFSpdG~~Lasgs~D----------G~V~IwDl~s------g~~i~~l~-~~~~~~V~~Vafspdg~~lLaSgs~D---- 59 (648)
+|+|||++|++++.+ ..|++||+.+ ++. ..+. . +...+..++|+|||+ .|+.++.+
T Consensus 136 ~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~-~~~~~~~~~~SpDG~-~la~~~~~~~~~ 212 (662)
T 3azo_A 136 VLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDD-AHRFVTGPRLSPDGR-QAVWLAWDHPRM 212 (662)
T ss_dssp EEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCS-CSSEECCCEECTTSS-EEEEEEECTTCC
T ss_pred EECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEec-CCCcccCceECCCCC-EEEEEECCCCCC
Confidence 589999999988876 5899999977 443 4444 3 345677789999999 45554433
Q ss_pred ----CeEEEEECC-CCC--ceeEEeccCCCCeEEEEEccCCCEEEEEeCCC--eEEEEeCCCCceeeEeeCCCC------
Q 006360 60 ----GTLHLWDTT-GRS--PKVSWLKQHSAPTAGISFSSDDKIIASVGLDK--KLYTYDPGSRRPSSCITYEAP------ 124 (648)
Q Consensus 60 ----g~V~IWDl~-t~~--~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg--~I~IWDl~tgk~v~~~~h~~~------ 124 (648)
..|++||+. ++. ........|...+..++|+|||++++++..++ .|++||+.+++...+..+...
T Consensus 213 ~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 213 PWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLW 292 (662)
T ss_dssp TTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCC
T ss_pred CCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccc
Confidence 479999998 451 22334445678899999999999888888888 788888877776555433221
Q ss_pred ---eEEEEEeCCCCEEEEEEcCCeEEEE--ECCCCCCceEEEeecCCCCCeeEE
Q 006360 125 ---FSSLAFIDDDWILTAGTSNGRVVFY--DIRGKPQPLTVLRACSSSEAVSSL 173 (648)
Q Consensus 125 ---I~slafsPdG~~Lasgs~DG~V~IW--Dl~s~~~~~~~l~~~~h~~~VtsL 173 (648)
+..++|++++.+++++.. +.++|| |+.++ ....+. .|...+..+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~--~~~~l~--~~~~~~~~~ 341 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESG--ELVDAA--GPWTEWAAT 341 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT--EEEECC--SSCCEEEEE
T ss_pred cccCceEeEeCCCEEEEEEEc-CccEEEEEECCCC--cEEEec--CCCCeEEEE
Confidence 467899999999999998 999999 54444 234443 556667666
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.31 E-value=7.3e-12 Score=131.80 Aligned_cols=198 Identities=7% Similarity=-0.029 Sum_probs=131.3
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEE-------------------EEEccCCCeEEEEE----eC
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRV-------------------LDYSRNSRHLLVTA----GD 58 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~-------------------Vafspdg~~lLaSg----s~ 58 (648)
|+|||++|+.++.++.|++||+.+++....+.. +...... ++|+|+++.+++.. ..
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 88 ISTDERAFFYVKNELNLMKVDLETLEEQVIYTV-DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred ECCCCCEEEEEEcCCcEEEEECCCCCcEEEEec-ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 799999999999999999999988876555543 2222222 34677776333222 45
Q ss_pred CCeEEEEECCCCCceeEEeccCCCCeEEEEEcc-CCCEEEEEeCC------CeEEEEeCCCCceeeEeeC--CCCeEEEE
Q 006360 59 DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS-DDKIIASVGLD------KKLYTYDPGSRRPSSCITY--EAPFSSLA 129 (648)
Q Consensus 59 Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafsP-dg~~LaSgs~D------g~I~IWDl~tgk~v~~~~h--~~~I~sla 129 (648)
+..|++||+.+++. ..+..+...+..+.|+| ++..|+.++.+ ..|++||+..++......+ ...+..++
T Consensus 167 ~~~l~~~d~~~g~~--~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 167 TCRLIKVDIETGEL--EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEF 244 (396)
T ss_dssp CEEEEEEETTTCCE--EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEE
T ss_pred cceEEEEECCCCcE--EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceE
Confidence 67899999988763 33446777899999999 88877776654 3689999877665444432 22577899
Q ss_pred EeCCCCEEEEEEcC-----CeEEEEECCCCCCceEEEeecCCCCCeeEEEEcc-CCCeEEEeccCCCCeEE------EEe
Q 006360 130 FIDDDWILTAGTSN-----GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR-AKPVFIDETTCKAETAL------LGG 197 (648)
Q Consensus 130 fsPdG~~Lasgs~D-----G~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafsp-dg~~Las~~~~~~~~~l------vs~ 197 (648)
|+|||++|+..+.+ +.|++||+.++. ...+... . .+. +.|+| +|++++..+.. ..+. +..
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~---~-~~~-~~~s~~dg~~l~~~~~~--~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLE-NEEVMVM---P-PCS-HLMSNFDGSLMVGDGCD--APVDVADADSYNI 316 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCC-EEEEEEC---C-SEE-EEEECSSSSEEEEEECC--C----------CC
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCC-eEEeeeC---C-CCC-CCccCCCCceEEEecCC--cceeecccccccc
Confidence 99999988777554 459999998763 2222221 1 133 89999 99887765221 1000 011
Q ss_pred eCCCeEEcCCCCC
Q 006360 198 AVGDSILMPDPLP 210 (648)
Q Consensus 198 s~D~~IkvWDlr~ 210 (648)
..+..|++||+..
T Consensus 317 ~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 317 ENDPFLYVLNTKA 329 (396)
T ss_dssp CCCCEEEEEETTT
T ss_pred CCCCcEEEEeccc
Confidence 2357888998754
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.28 E-value=1.4e-10 Score=134.17 Aligned_cols=173 Identities=9% Similarity=0.077 Sum_probs=118.7
Q ss_pred CccCCCCEEEEEECCC-----cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCe--------------
Q 006360 1 MYNCKDEHLASISLSG-----DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT-------------- 61 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG-----~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~-------------- 61 (648)
+|||||++||.+..++ .|++||+.+++.+..... + ..+..++|+||++. |+.+..++.
T Consensus 131 ~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~-~~~~~~~wspDg~~-l~~~~~~~~~~~~~~~~~~~~~~ 207 (710)
T 2xdw_A 131 AFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-R-VKFSCMAWTHDGKG-MFYNAYPQQDGKSDGTETSTNLH 207 (710)
T ss_dssp EECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-E-ECSCCEEECTTSSE-EEEEECCCCSSCCSSSCCCCCCC
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-C-cccceEEEEeCCCE-EEEEEECCccccccccccccCCC
Confidence 4899999998776543 899999998887653322 1 12456899999994 555555544
Q ss_pred --EEEEECCCCCce-eEEe--ccCCCCeEEEEEccCCCEEEEEeC-----CCeEEEEeCCC------C--ceeeEeeCCC
Q 006360 62 --LHLWDTTGRSPK-VSWL--KQHSAPTAGISFSSDDKIIASVGL-----DKKLYTYDPGS------R--RPSSCITYEA 123 (648)
Q Consensus 62 --V~IWDl~t~~~~-v~~l--~~H~~~V~slafsPdg~~LaSgs~-----Dg~I~IWDl~t------g--k~v~~~~h~~ 123 (648)
|++|++.++... ...+ ..|...+..+.|+||+++|+.++. +..|++||+.+ + ....+..+..
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~ 287 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE 287 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS
T ss_pred CEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC
Confidence 999999876532 1222 235566889999999999988765 56899999986 5 3334444555
Q ss_pred CeEEEEEeCCCCEEEEEEcC----CeEEEEECCCCCC-ceEEEeecCCC--CCeeEEEEccCC
Q 006360 124 PFSSLAFIDDDWILTAGTSN----GRVVFYDIRGKPQ-PLTVLRACSSS--EAVSSLCWQRAK 179 (648)
Q Consensus 124 ~I~slafsPdG~~Lasgs~D----G~V~IWDl~s~~~-~~~~l~~~~h~--~~VtsLafspdg 179 (648)
.+.. .|+++|..|+..+.+ +.|++||+.+... ....+. .|. ..+..++|.+++
T Consensus 288 ~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~ 347 (710)
T 2xdw_A 288 GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV--PEHEKDVLEWVACVRSN 347 (710)
T ss_dssp SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--CCCSSCEEEEEEEETTT
T ss_pred cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc--CCCCCCeEEEEEEEcCC
Confidence 5544 588999988877653 3699999987632 223343 333 367788887643
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.28 E-value=7.9e-11 Score=122.31 Aligned_cols=177 Identities=15% Similarity=0.217 Sum_probs=117.1
Q ss_pred CccCCCCEEEEEECC---C--cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeC-----------------
Q 006360 1 MYNCKDEHLASISLS---G--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD----------------- 58 (648)
Q Consensus 1 AFSpdG~~Lasgs~D---G--~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~----------------- 58 (648)
+|+|||++|+.++.+ + .|++||+.+++....... . . +..++|+|+++.+++++..
T Consensus 65 ~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 65 RISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-K-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp EECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-S-E-EEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred EECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-C-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 489999999887654 2 488889877766554443 2 3 8889999999855554432
Q ss_pred ---------CCeEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCC---------eEEEEeCCCCceeeEee
Q 006360 59 ---------DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDK---------KLYTYDPGSRRPSSCIT 120 (648)
Q Consensus 59 ---------Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg---------~I~IWDl~tgk~v~~~~ 120 (648)
...|++||+.+++. +..+.. . .+..++|+||+ +++++..+. .|+++| +++......
T Consensus 142 ~g~~~~~~~~~~l~~~d~~~~~~-~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~ 215 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTESEEV-IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFE 215 (347)
T ss_dssp --------CEEEEEEEETTTTEE-EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEE
T ss_pred cCcccccCccceEEEEECCCCeE-EeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEecc
Confidence 25799999988764 133333 3 78899999999 777776542 456666 665554444
Q ss_pred CCCCeEEEEEeCCCCEEEEEEcC--------CeEEEEECCCCCCceEEEeecCCCCCeeE-EEEccCCCeEEEeccCCCC
Q 006360 121 YEAPFSSLAFIDDDWILTAGTSN--------GRVVFYDIRGKPQPLTVLRACSSSEAVSS-LCWQRAKPVFIDETTCKAE 191 (648)
Q Consensus 121 h~~~I~slafsPdG~~Lasgs~D--------G~V~IWDl~s~~~~~~~l~~~~h~~~Vts-Lafspdg~~Las~~~~~~~ 191 (648)
+ ..+..+ +|||++|+.++.+ ..|++|| ++ .. ..+. ..|...+.. +.|+ ++ ++
T Consensus 216 ~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-~~-~~l~-~~~~~~~~~~~~~s-dg-~~--------- 276 (347)
T 2gop_A 216 K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK-EV-MGIL-DEVDRGVGQAKIKD-GK-VY--------- 276 (347)
T ss_dssp E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS-CE-EESS-TTCCSEEEEEEEET-TE-EE---------
T ss_pred C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC-ce-Eecc-ccCCcccCCccEEc-Cc-EE---------
Confidence 4 455444 9999998887754 3688888 33 22 2221 245667776 8887 65 33
Q ss_pred eEEEEeeCCCeEEcCCCC
Q 006360 192 TALLGGAVGDSILMPDPL 209 (648)
Q Consensus 192 ~~lvs~s~D~~IkvWDlr 209 (648)
+.+..++.+++| +.
T Consensus 277 ---~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 277 ---FTLFEEGSVNLY-IW 290 (347)
T ss_dssp ---EEEEETTEEEEE-EE
T ss_pred ---EEEecCCcEEEE-Ec
Confidence 334557778888 65
No 179
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.28 E-value=9e-11 Score=126.79 Aligned_cols=170 Identities=8% Similarity=0.002 Sum_probs=128.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-----------eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGA-----------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG 69 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~-----------~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t 69 (648)
|++++..++++|+.+ .+.+|++.+.. ....+. ... |+.|+| ++. +|+++ .++.|++||+..
T Consensus 44 ais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~--lp~-V~~l~f--d~~-~L~v~-~~~~l~v~dv~s 115 (388)
T 1xip_A 44 DISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKE--IPD-VIFVCF--HGD-QVLVS-TRNALYSLDLEE 115 (388)
T ss_dssp EEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEE--CTT-EEEEEE--ETT-EEEEE-ESSEEEEEESSS
T ss_pred EEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEee--CCC-eeEEEE--CCC-EEEEE-cCCcEEEEEchh
Confidence 457788899999887 46679865332 112232 344 899999 776 67777 889999999977
Q ss_pred CCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEE
Q 006360 70 RSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFY 149 (648)
Q Consensus 70 ~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IW 149 (648)
... ......|...|.++.+.+. .++++..||.|.+||+.++.... +...|.|++|+|+| ++.|..||.|++|
T Consensus 116 l~~-~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~ 187 (388)
T 1xip_A 116 LSE-FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQSF 187 (388)
T ss_dssp TTC-EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSCEEEE
T ss_pred hhc-cCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCcEEEE
Confidence 663 4456677788988887754 38889999999999999887654 34689999999999 7889999999999
Q ss_pred ECCCCCCc-eEEEee-------cCCCCCeeEEEEccCCCeEEEec
Q 006360 150 DIRGKPQP-LTVLRA-------CSSSEAVSSLCWQRAKPVFIDET 186 (648)
Q Consensus 150 Dl~s~~~~-~~~l~~-------~~h~~~VtsLafspdg~~Las~~ 186 (648)
+....... .+.+.. .+|...|.+|+|.+++.++++..
T Consensus 188 ~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 188 AWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred cCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 98876311 233311 13778999999999999988753
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.26 E-value=2.7e-10 Score=121.24 Aligned_cols=175 Identities=10% Similarity=0.097 Sum_probs=124.3
Q ss_pred CccCCCCEEEEEE----------CCCcEEEEECCCCceeEEEeCCC-----CCcEEEEEEccCCCeEEEEEeC-CCeEEE
Q 006360 1 MYNCKDEHLASIS----------LSGDLILHNLASGAKAAELKDPN-----EQVLRVLDYSRNSRHLLVTAGD-DGTLHL 64 (648)
Q Consensus 1 AFSpdG~~Lasgs----------~DG~V~IwDl~sg~~i~~l~~~~-----~~~V~~Vafspdg~~lLaSgs~-Dg~V~I 64 (648)
+|+|||++|+++. .++.|.+||..+++.+.++.... ......++|+|++++++++... ++.|.+
T Consensus 56 ~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v 135 (361)
T 2oiz_A 56 QVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGI 135 (361)
T ss_dssp EECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEE
T ss_pred EECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEE
Confidence 5899999998886 35679999999999888876421 2234568999999944444333 688999
Q ss_pred EECCCCCceeEE-ecc-------------------------------CCCC-----------------------------
Q 006360 65 WDTTGRSPKVSW-LKQ-------------------------------HSAP----------------------------- 83 (648)
Q Consensus 65 WDl~t~~~~v~~-l~~-------------------------------H~~~----------------------------- 83 (648)
||+.+.+. +.. +.. ....
T Consensus 136 ~d~~~~~~-~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 214 (361)
T 2oiz_A 136 VDVAKGDY-VEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKA 214 (361)
T ss_dssp EETTTTEE-EEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEE
T ss_pred EECCCCcE-EEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEE
Confidence 99865432 111 000 0000
Q ss_pred --------e------------------------------E---EEEEccCCCEEEEEeC-----------CCeEEEEeCC
Q 006360 84 --------T------------------------------A---GISFSSDDKIIASVGL-----------DKKLYTYDPG 111 (648)
Q Consensus 84 --------V------------------------------~---slafsPdg~~LaSgs~-----------Dg~I~IWDl~ 111 (648)
| . .++|+|+++.++++.. .+.|.+||+.
T Consensus 215 ~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~ 294 (361)
T 2oiz_A 215 HFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTK 294 (361)
T ss_dssp EEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETT
T ss_pred EEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECC
Confidence 0 0 1577888777776643 3489999999
Q ss_pred CCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEee-cCCCCCeeEEEEccCCC
Q 006360 112 SRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRA-CSSSEAVSSLCWQRAKP 180 (648)
Q Consensus 112 tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~-~~h~~~VtsLafspdg~ 180 (648)
+++.+..+.... +.+++|+|||++|++++. +.|.+||..+.. ++++.. ..+......++|+|+|+
T Consensus 295 t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~--l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 295 TKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPE--PKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSS--CEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCc--ceeeEEeccCCCCcEEEEecCCCC
Confidence 999998887555 999999999999998887 999999998862 122222 25677889999999875
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.25 E-value=5.7e-10 Score=111.50 Aligned_cols=191 Identities=7% Similarity=0.016 Sum_probs=134.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|+++|+++++.. ++.|++||.... ....+.......+..+++.++++ ++++...++.|.+||..+... ......+
T Consensus 73 ~~~~~g~l~v~~~-~~~i~~~d~~~~-~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~-~~~~~~~ 148 (270)
T 1rwi_B 73 AVDGAGTVYVTDF-NNRVVTLAAGSN-NQTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQ-TVLPFTG 148 (270)
T ss_dssp EECTTCCEEEEET-TTEEEEECTTCS-CCEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSC-EECCCCS
T ss_pred EECCCCCEEEEcC-CCEEEEEeCCCc-eEeeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCcee-Eeecccc
Confidence 3678888665554 889999997544 33434332335678899999987 777777788999998755442 2222233
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~ 159 (648)
...+.+++++++++++++...++.|.+||.......... .....+.+++++++|.++++...++.|.+||..+... .
T Consensus 149 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~--~ 226 (270)
T 1rwi_B 149 LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS--T 226 (270)
T ss_dssp CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC--E
T ss_pred CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc--e
Confidence 346789999999998777777889999998876654332 2336789999999997777777788999999976532 1
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
. ....+...+.+++++++|+ ++++...++.|+++++..
T Consensus 227 ~-~~~~~~~~p~~i~~~~~g~------------l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 227 V-LPFTGLNTPLAVAVDSDRT------------VYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp E-CCCCSCSCEEEEEECTTCC------------EEEEEGGGTEEEEECCCG
T ss_pred e-eccCCCCCceeEEECCCCC------------EEEEECCCCEEEEEcCCC
Confidence 1 1113345788999988654 445556688999988754
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.24 E-value=3.3e-10 Score=116.44 Aligned_cols=171 Identities=8% Similarity=-0.033 Sum_probs=128.8
Q ss_pred CCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC-CC
Q 006360 4 CKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH-SA 82 (648)
Q Consensus 4 pdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H-~~ 82 (648)
..+++|++++.++.|++||.++|+.+.++..+....++++.+.|+|+ +|+ +.++.|+.||. +++. +..+..+ ..
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~-~W~~~~~~~~ 77 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRE-LWNIAAPAGC 77 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCE-EEEEECCTTC
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCE-EEEEcCCCCc
Confidence 34688999999999999999999999999864434678899999998 666 45788999999 5553 4445443 34
Q ss_pred CeEEEEEccCCCEEEEEeC-CCeEEEEeCCCCceeeEeeC-------CCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCC
Q 006360 83 PTAGISFSSDDKIIASVGL-DKKLYTYDPGSRRPSSCITY-------EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (648)
Q Consensus 83 ~V~slafsPdg~~LaSgs~-Dg~I~IWDl~tgk~v~~~~h-------~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~ 154 (648)
.+.++.+.++|++|++.+. ++.|..+|. +++.+..+.. ......+.+.++|++|++...++.|.+||.. +
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C
Confidence 6889999999999999887 788888886 6776655531 1234566788999999999999999999998 5
Q ss_pred CCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006360 155 PQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 155 ~~~~~~l~~~~h~~~VtsLafspdg~~Las~ 185 (648)
+ .+..+. ....+.++.+.++|++++++
T Consensus 156 ~-~~w~~~---~~~~~~~~~~~~~g~~~v~~ 182 (276)
T 3no2_A 156 Q-LLNSVK---LSGTPFSSAFLDNGDCLVAC 182 (276)
T ss_dssp C-EEEEEE---CSSCCCEEEECTTSCEEEEC
T ss_pred C-EEEEEE---CCCCccceeEcCCCCEEEEe
Confidence 3 333343 22456677777776666554
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.23 E-value=4.7e-10 Score=119.44 Aligned_cols=110 Identities=8% Similarity=0.047 Sum_probs=80.8
Q ss_pred CCCCEEEEEE------CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEe----------CCCeEEEEEC
Q 006360 4 CKDEHLASIS------LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG----------DDGTLHLWDT 67 (648)
Q Consensus 4 pdG~~Lasgs------~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs----------~Dg~V~IWDl 67 (648)
++++++++.. .|+.|++||..+++.+..+..+ ... .++|+|+++ +++++. .++.|.+||.
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g-~~p--~i~~spdg~-~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTA-FNG--HVQVSNDGK-KIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECC-EEE--EEEECTTSS-EEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCC-CCC--ceEECCCCC-EEEEEEecccccccCCCCCEEEEEEC
Confidence 3566776654 3679999999999998888753 223 789999999 455544 3678999999
Q ss_pred CCCCceeEEecc------CCCCeEEEEEccCCCEEEEEeC--CCeEEEEeCCCCceeeE
Q 006360 68 TGRSPKVSWLKQ------HSAPTAGISFSSDDKIIASVGL--DKKLYTYDPGSRRPSSC 118 (648)
Q Consensus 68 ~t~~~~v~~l~~------H~~~V~slafsPdg~~LaSgs~--Dg~I~IWDl~tgk~v~~ 118 (648)
.+.+. +..+.. +......++|+||+++|+++.. ++.|.+||+.+++.+..
T Consensus 89 ~t~~~-~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 89 DKLTF-EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp TTCCE-EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred cCCcE-EEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 87764 333332 2345778999999999998874 57899999887665443
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.22 E-value=1e-09 Score=112.77 Aligned_cols=200 Identities=13% Similarity=0.047 Sum_probs=145.9
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeC-CCeEEEEECCCCCceeEEec--
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-DGTLHLWDTTGRSPKVSWLK-- 78 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~-Dg~V~IWDl~t~~~~v~~l~-- 78 (648)
+.|+|++|+ +.++.|+.||. +++.+.++..+....+.++.+.++++ ++++.+. ++.|..+|.++.. +..+.
T Consensus 44 ~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~~Gk~--l~~~~~~ 117 (276)
T 3no2_A 44 ATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGN-ALVAWCGHPSTILEVNMKGEV--LSKTEFE 117 (276)
T ss_dssp ECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSC-EEEEEESTTEEEEEECTTSCE--EEEEEEC
T ss_pred ECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCC-EEEEecCCCCEEEEEeCCCCE--EEEEecc
Confidence 578999888 35778999998 89999999875445788899999998 6766666 7788888874432 22222
Q ss_pred ----cCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCC
Q 006360 79 ----QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (648)
Q Consensus 79 ----~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~ 154 (648)
.+......+++.+++++|++...++.|.+||.. |+.+..+.....+.++.+.++|++++++..++.|..||..++
T Consensus 118 ~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 118 TGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp CSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTC
T ss_pred CCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCC
Confidence 122345567788999999999999999999998 998888876667778888999999999998889999999977
Q ss_pred CCceEEEeecC----CCCCeeEEEEccCCCeEEEeccCC-------CCeEEEEeeCCCeEEcCCCCC
Q 006360 155 PQPLTVLRACS----SSEAVSSLCWQRAKPVFIDETTCK-------AETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 155 ~~~~~~l~~~~----h~~~VtsLafspdg~~Las~~~~~-------~~~~lvs~s~D~~IkvWDlr~ 210 (648)
+. +..+.... ....+.+++..++|.++++..... +...++--..++.+ +|....
T Consensus 197 ~~-~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~-~W~~~~ 261 (276)
T 3no2_A 197 RI-VRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKV-VWQLND 261 (276)
T ss_dssp CE-EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBE-EEEECC
T ss_pred cE-EEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCE-EEEecC
Confidence 43 33333111 123378899999999988874221 12234444556766 665443
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.21 E-value=2.9e-10 Score=131.27 Aligned_cols=191 Identities=12% Similarity=-0.001 Sum_probs=127.0
Q ss_pred CccCCCCEEEEE-----ECCCcEEEEECCCCcee-EEEeCCCCCcEEEEEEccCCCeEEEEEeCCCe-------------
Q 006360 1 MYNCKDEHLASI-----SLSGDLILHNLASGAKA-AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT------------- 61 (648)
Q Consensus 1 AFSpdG~~Lasg-----s~DG~V~IwDl~sg~~i-~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~------------- 61 (648)
+|||||++||.+ +.+..|++||+.+++.+ ..... .. ....++|+||++ .|+.++.|..
T Consensus 127 ~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~-~~-~~~~~~wspDg~-~l~~~~~d~~~~~~~~~~~~~~~ 203 (695)
T 2bkl_A 127 AVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE-GG-KYATPKWTPDSK-GFYYEWLPTDPSIKVDERPGYTT 203 (695)
T ss_dssp EECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS-CC-TTCCCEECTTSS-EEEEEECCCCTTSCGGGGGGGCE
T ss_pred EECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC-cc-cccceEEecCCC-EEEEEEecCCCCCccccCCCCCE
Confidence 489999999843 33468999999988865 21111 11 114689999998 5666666655
Q ss_pred EEEEECCCCCc---eeEEeccCCCCeEEEEEccCCCEEEEEeCCC----eEEEEeCCCCceeeEeeCCCCeEEEEEeCCC
Q 006360 62 LHLWDTTGRSP---KVSWLKQHSAPTAGISFSSDDKIIASVGLDK----KLYTYDPGSRRPSSCITYEAPFSSLAFIDDD 134 (648)
Q Consensus 62 V~IWDl~t~~~---~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg----~I~IWDl~tgk~v~~~~h~~~I~slafsPdG 134 (648)
|++|++.++.. .+.....|...+..+.|+|||++|+.++.++ .|++||..+++...+..+...+....| ++|
T Consensus 204 v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g 282 (695)
T 2bkl_A 204 IRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKD 282 (695)
T ss_dssp EEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETT
T ss_pred EEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCC
Confidence 99999987652 2222334556789999999999998888776 788888777776666666666777777 566
Q ss_pred CEEEEEEc----CCeEEEEECCCCCC-ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 135 WILTAGTS----NGRVVFYDIRGKPQ-PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 135 ~~Lasgs~----DG~V~IWDl~s~~~-~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
. |+..+. ++.|++||+.+... ....+........|..++|+ + +.++++...|+..++|.+.
T Consensus 283 ~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~------------~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 283 R-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-G------------GHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp E-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-T------------TEEEEEEEETTEEEEEEEE
T ss_pred c-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-C------------CEEEEEEEECCEEEEEEEe
Confidence 6 554443 57899999987532 12333322224557777776 2 3345555667777777543
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.20 E-value=2.6e-10 Score=118.02 Aligned_cols=188 Identities=12% Similarity=0.108 Sum_probs=133.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+|++++..++....++.++.| .++....+.. +...+.+++|+++++ +++++..++.|++||..+++. ......+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~-~~~~~~~ 85 (333)
T 2dg1_A 12 FYSGKSNSAVPIISESELQTI---TAEPWLEISK-KGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEI-KRPFVSH 85 (333)
T ss_dssp CSCGGGGCSSCCCCGGGSCEE---ECEEEEEEES-SCCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCE-EEEEECS
T ss_pred eecCCccceeEEeecccCccc---ccceeEEEec-cCccccCcEECCCCC-EEEEECCCCEEEEEeCCCCcE-EEEeeCC
Confidence 477777777666778889999 3455566665 344568899999998 777888899999999988763 2233356
Q ss_pred CCCeEEEEEccCCCEEEEEeCC----CeEEEEeCCCCceeeEee---CCCCeEEEEEeCCCCEEEEEEc------CCeEE
Q 006360 81 SAPTAGISFSSDDKIIASVGLD----KKLYTYDPGSRRPSSCIT---YEAPFSSLAFIDDDWILTAGTS------NGRVV 147 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~D----g~I~IWDl~tgk~v~~~~---h~~~I~slafsPdG~~Lasgs~------DG~V~ 147 (648)
...+.+++|+++++++++...+ +.|.+||..+++....+. ....+.+++++|+|+++++... .+.|+
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEE
Confidence 6789999999999988877766 689999998877653332 4457899999999987776553 35677
Q ss_pred EEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 148 FYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 148 IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
.||..+.. . ..+. .+...+.+++|+++|++++. +...++.|.+||+.
T Consensus 166 ~~~~~~~~-~-~~~~--~~~~~~~~i~~~~dg~~l~v-----------~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 166 YVSPDFRT-V-TPII--QNISVANGIALSTDEKVLWV-----------TETTANRLHRIALE 212 (333)
T ss_dssp EECTTSCC-E-EEEE--EEESSEEEEEECTTSSEEEE-----------EEGGGTEEEEEEEC
T ss_pred EEeCCCCE-E-EEee--cCCCcccceEECCCCCEEEE-----------EeCCCCeEEEEEec
Confidence 77765542 2 2222 12345788999998765433 23346678888764
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.19 E-value=6.8e-10 Score=116.31 Aligned_cols=191 Identities=8% Similarity=0.007 Sum_probs=131.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCC----CcEEEEEEccCCCeEEEEEe-CCCeEEEEECCCCCceeE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNE----QVLRVLDYSRNSRHLLVTAG-DDGTLHLWDTTGRSPKVS 75 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~----~~V~~Vafspdg~~lLaSgs-~Dg~V~IWDl~t~~~~v~ 75 (648)
+|+++++.+++...++.|.+||..+++....+..... .....+++ +++.++++.. .++.|.+||..+.+. +.
T Consensus 90 ~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~-~~ 166 (328)
T 3dsm_A 90 HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKV-VD 166 (328)
T ss_dssp EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEE-EE
T ss_pred EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeE-EE
Confidence 3567884444443789999999999988877764221 13445677 3443555544 489999999988764 33
Q ss_pred EeccCCCCeEEEEEccCCCEEEEEeCC----------CeEEEEeCCCCceeeEeeC--CCCeEEEEEeCCCCEEEEEEcC
Q 006360 76 WLKQHSAPTAGISFSSDDKIIASVGLD----------KKLYTYDPGSRRPSSCITY--EAPFSSLAFIDDDWILTAGTSN 143 (648)
Q Consensus 76 ~l~~H~~~V~slafsPdg~~LaSgs~D----------g~I~IWDl~tgk~v~~~~h--~~~I~slafsPdG~~Lasgs~D 143 (648)
.+.. .....++++++++++++++..+ +.|.+||..+++....+.. ......++|+||++.|++...
T Consensus 167 ~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 167 ELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp EEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-
T ss_pred EEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-
Confidence 3333 3346789999999877777655 7899999999987766653 347899999999999988765
Q ss_pred CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEe----eCCCeEEcCCCC
Q 006360 144 GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGG----AVGDSILMPDPL 209 (648)
Q Consensus 144 G~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~----s~D~~IkvWDlr 209 (648)
.|.+||..+.+.....+. ..+.....+++++|++ +.++++. ..++.|.+||+.
T Consensus 245 -~v~~~d~~t~~~~~~~~~-~~~~~~p~gi~vdp~~-----------g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 -DIWRMPVEADRVPVRPFL-EFRDTKYYGLTVNPNN-----------GEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp -SEEEEETTCSSCCSSCSB-CCCSSCEEEEEECTTT-----------CCEEEEECTTSSSEEEEEEECTT
T ss_pred -EEEEEECCCCceeeeeee-cCCCCceEEEEEcCCC-----------CeEEEEcccccccCCEEEEECCC
Confidence 899999987642111111 0124668889999853 3334444 446788888876
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.16 E-value=2.5e-09 Score=123.57 Aligned_cols=198 Identities=10% Similarity=0.053 Sum_probs=134.9
Q ss_pred CccCCCCEEEEEECCCc----------------EEEEECCCCcee--EEEeCC-CCCcEEEEEEccCCCeEEEEEeC---
Q 006360 1 MYNCKDEHLASISLSGD----------------LILHNLASGAKA--AELKDP-NEQVLRVLDYSRNSRHLLVTAGD--- 58 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~----------------V~IwDl~sg~~i--~~l~~~-~~~~V~~Vafspdg~~lLaSgs~--- 58 (648)
+|+|||+.|+.+..++. |++|++.+++.. ..+... +...+..+.|+||++.++++...
T Consensus 177 ~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 256 (710)
T 2xdw_A 177 AWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD 256 (710)
T ss_dssp EECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS
T ss_pred EEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC
Confidence 58999999999888766 999999877632 222322 34456778999999955555432
Q ss_pred -CCeEEEEECCC------CCceeEEeccCCCCeEEEEEccCCCEEEEEeCCC----eEEEEeCCCCce---eeEeeCCC-
Q 006360 59 -DGTLHLWDTTG------RSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDK----KLYTYDPGSRRP---SSCITYEA- 123 (648)
Q Consensus 59 -Dg~V~IWDl~t------~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg----~I~IWDl~tgk~---v~~~~h~~- 123 (648)
+..|++||+.+ +......+..+...+.. .|++++..|+..+.++ .|++||+.++.. ..++.+..
T Consensus 257 ~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 335 (710)
T 2xdw_A 257 PVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK 335 (710)
T ss_dssp SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS
T ss_pred CccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCC
Confidence 57899999976 43224556667666665 4888888887776543 699999988742 34444443
Q ss_pred -CeEEEEEeCCCCEEEEEEcCCe--EEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCC
Q 006360 124 -PFSSLAFIDDDWILTAGTSNGR--VVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVG 200 (648)
Q Consensus 124 -~I~slafsPdG~~Lasgs~DG~--V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D 200 (648)
.+..++|++++.++++...|+. |++||+.++. ....+. .+.+.|..+.+++++..++... -+....
T Consensus 336 ~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~-~~~~l~--~~~~~v~~~~~s~d~~~l~~~~--------ss~~~P 404 (710)
T 2xdw_A 336 DVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA-LLKIFP--LEVGSVVGYSGQKKDTEIFYQF--------TSFLSP 404 (710)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC-EEEEEC--CCSSEEEEEECCTTCSEEEEEE--------ECSSCC
T ss_pred CeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC-EEEecC--CCCceEEEEecCCCCCEEEEEE--------eCCCCC
Confidence 5788999987888888888885 6667775552 334444 4567788899998776554331 111235
Q ss_pred CeEEcCCCCC
Q 006360 201 DSILMPDPLP 210 (648)
Q Consensus 201 ~~IkvWDlr~ 210 (648)
..|++||+..
T Consensus 405 ~~i~~~d~~t 414 (710)
T 2xdw_A 405 GIIYHCDLTK 414 (710)
T ss_dssp CEEEEEETTS
T ss_pred CEEEEEECCC
Confidence 6788888753
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.16 E-value=2e-09 Score=107.54 Aligned_cols=190 Identities=12% Similarity=0.055 Sum_probs=128.2
Q ss_pred CccCCCCEEE-EEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-
Q 006360 1 MYNCKDEHLA-SISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK- 78 (648)
Q Consensus 1 AFSpdG~~La-sgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~- 78 (648)
+++++|++++ +...++.|.+||..++.. ..+.......+.++++.++++ ++++.. ++.|++||..+... ..+.
T Consensus 30 ~~~~~g~l~v~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~~~--~~~~~ 104 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGMYGRVVKLATGSTGT-TVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSNNQ--TVLPF 104 (270)
T ss_dssp EECTTCCEEEEECSSSCEEEEECC------EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEEECTTCSCC--EECCC
T ss_pred EECCCCCEEEEccCCCCcEEEecCCCccc-ceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCceE--eeeec
Confidence 3678888666 446778999999754432 222222334567799999987 566555 88999999877653 2232
Q ss_pred cCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCc
Q 006360 79 QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (648)
Q Consensus 79 ~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~ 157 (648)
.....+.++++.++++++++...++.|.+||..+....... .....+.+++++++|+++++...++.|++||..+...
T Consensus 105 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~- 183 (270)
T 1rwi_B 105 DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ- 183 (270)
T ss_dssp CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE-
T ss_pred CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce-
Confidence 33357899999999998888778889999987665443222 2334678999999999777777788999999887532
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 158 ~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
......+...+.+|+++++|. ++++...++.|.+||...
T Consensus 184 --~~~~~~~~~~p~~i~~d~~g~------------l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 184 --VVLPFTDITAPWGIAVDEAGT------------VYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp --EECCCSSCCSEEEEEECTTCC------------EEEEETTTSCEEEECTTC
T ss_pred --EeecccCCCCceEEEECCCCC------------EEEEECCCCcEEEEcCCC
Confidence 111123336788999988653 334444577888888643
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.16 E-value=1.9e-09 Score=112.92 Aligned_cols=183 Identities=8% Similarity=0.001 Sum_probs=130.6
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC----
Q 006360 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS---- 81 (648)
Q Consensus 6 G~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~---- 81 (648)
++.+++...++.|.+||..+++.+..+.. ......++++++++ ++++...++.|.+||..+.+. ...+....
T Consensus 54 ~~lyv~~~~~~~v~viD~~t~~~~~~i~~--~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~-~~~i~~g~~~~~ 129 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDINTFKEVGRITG--FTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEI-TGYIECPDMDME 129 (328)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEEC--CSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEE-EEEEECTTCCTT
T ss_pred CEEEEEEcCCCEEEEEECcccEEEEEcCC--CCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeE-EEEEEcCCcccc
Confidence 33445555678999999999999888863 45677899988884 666655899999999988763 33333222
Q ss_pred -CCeEEEEEccCCCEEEEEe--CCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcC----------CeEEE
Q 006360 82 -APTAGISFSSDDKIIASVG--LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSN----------GRVVF 148 (648)
Q Consensus 82 -~~V~slafsPdg~~LaSgs--~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~D----------G~V~I 148 (648)
.....+++ ++..|+.+. .++.|.+||+.+++.+..+........++++++|++++++..+ +.|.+
T Consensus 130 ~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 130 SGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp TCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred CCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEE
Confidence 14567777 344555554 4889999999999988877766667889999999877766554 78999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 149 WDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
||..+. +....+.. ........++|+|+++++... +..|.+||+..
T Consensus 208 id~~t~-~v~~~~~~-~~g~~p~~la~~~d~~~lyv~--------------~~~v~~~d~~t 253 (328)
T 3dsm_A 208 IDAETF-TVEKQFKF-KLGDWPSEVQLNGTRDTLYWI--------------NNDIWRMPVEA 253 (328)
T ss_dssp EETTTT-EEEEEEEC-CTTCCCEEEEECTTSCEEEEE--------------SSSEEEEETTC
T ss_pred EECCCC-eEEEEEec-CCCCCceeEEEecCCCEEEEE--------------ccEEEEEECCC
Confidence 999876 33333332 223468999999987776654 22677777753
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.13 E-value=6.6e-09 Score=117.72 Aligned_cols=188 Identities=14% Similarity=0.130 Sum_probs=136.5
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC--CCCceeEEeccCCCC
Q 006360 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT--GRSPKVSWLKQHSAP 83 (648)
Q Consensus 6 G~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~--t~~~~v~~l~~H~~~ 83 (648)
+.++++...++.|.+||..+++.+..+.. ...++.+.|+||++ ++++++.|+.|.+||+. +.+. +..+.... .
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~--g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~~t~~~-v~~i~~G~-~ 241 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDT--GYAVHISRLSASGR-YLFVIGRDGKVNMIDLWMKEPTT-VAEIKIGS-E 241 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSC-EEEEEETTSEEEEEETTSSSCCE-EEEEECCS-E
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeC--CCCccceEECCCCC-EEEEEcCCCeEEEEECCCCCCcE-eEEEecCC-C
Confidence 34566677789999999999999988874 34567899999999 67777899999999995 5553 44444433 4
Q ss_pred eEEEEEc----cCCCEEEEEeCC-CeEEEEeCCCCceeeEeeC------------CCCeEEEEEeCCCCEEE-EEEcCCe
Q 006360 84 TAGISFS----SDDKIIASVGLD-KKLYTYDPGSRRPSSCITY------------EAPFSSLAFIDDDWILT-AGTSNGR 145 (648)
Q Consensus 84 V~slafs----Pdg~~LaSgs~D-g~I~IWDl~tgk~v~~~~h------------~~~I~slafsPdG~~La-sgs~DG~ 145 (648)
...++|+ |||++++++... +.|.++|..+.+.+..+.. ...+..+.+++++..++ ....+|.
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 6889999 699988877664 8999999999988877642 12577888888765544 4456799
Q ss_pred EEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 146 VVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 146 V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
|.++|......+ .+ ..........++.|+|+|+++++. +..++.|.++|+...
T Consensus 322 v~~vd~~~~~~~-~v-~~i~~~~~~~d~~~~pdgr~~~va-----------~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 322 ILLVDYTDLNNL-KT-TEISAERFLHDGGLDGSHRYFITA-----------ANARNKLVVIDTKEG 374 (567)
T ss_dssp EEEEETTCSSEE-EE-EEEECCSSEEEEEECTTSCEEEEE-----------EGGGTEEEEEETTTT
T ss_pred EEEEecCCCccc-ee-eeeeccccccCceECCCCCEEEEE-----------eCCCCeEEEEECCCC
Confidence 999999875322 22 212345567789999988876554 223566666766543
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.12 E-value=2.7e-09 Score=108.88 Aligned_cols=174 Identities=11% Similarity=0.047 Sum_probs=120.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeC---CCCCcEEEEEEccCCCeEEEEE----e-------------CCC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD---PNEQVLRVLDYSRNSRHLLVTA----G-------------DDG 60 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~---~~~~~V~~Vafspdg~~lLaSg----s-------------~Dg 60 (648)
+|+++|+++++...++.|.+||..+++....... .....+..+++.++|+ ++++. . ..+
T Consensus 75 ~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 75 CLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp EECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred eECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCc
Confidence 4788999887776678999999988875443321 1123456789999998 66663 2 134
Q ss_pred eEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCC-CCce---eeEe-eCCCCeEEEEEeCCCC
Q 006360 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPG-SRRP---SSCI-TYEAPFSSLAFIDDDW 135 (648)
Q Consensus 61 ~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~-tgk~---v~~~-~h~~~I~slafsPdG~ 135 (648)
.|+.||.. +. +..+..+...++.++|+|+++++++...++.|++||+. +++. ...+ .+...+.+++++++|+
T Consensus 154 ~l~~~~~~-g~--~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~ 230 (296)
T 3e5z_A 154 WVFRLAPD-GT--LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL 230 (296)
T ss_dssp EEEEECTT-SC--EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC
T ss_pred EEEEECCC-CC--EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC
Confidence 56666655 33 34455666778999999999998777888999999987 5554 2222 2345577899999998
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEE-ccCCCeEEEe
Q 006360 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCW-QRAKPVFIDE 185 (648)
Q Consensus 136 ~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLaf-spdg~~Las~ 185 (648)
++++. ++.|.+||... +.+..+. .+.. +.+++| .++++.|+.+
T Consensus 231 l~v~~--~~~v~~~~~~g--~~~~~~~--~~~~-~~~~~f~~~d~~~L~v~ 274 (296)
T 3e5z_A 231 IWASA--GDGVHVLTPDG--DELGRVL--TPQT-TSNLCFGGPEGRTLYMT 274 (296)
T ss_dssp EEEEE--TTEEEEECTTS--CEEEEEE--CSSC-CCEEEEESTTSCEEEEE
T ss_pred EEEEc--CCeEEEECCCC--CEEEEEE--CCCC-ceeEEEECCCCCEEEEE
Confidence 66665 78899999873 3344444 3455 899999 4766655443
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.11 E-value=2.3e-08 Score=100.61 Aligned_cols=187 Identities=9% Similarity=-0.014 Sum_probs=130.8
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~-~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
++++|+++++...++.|..||.. ++. ..+.. .....+..+++.+++. ++++...++.|.+||. ++.........+
T Consensus 64 ~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~~ 139 (299)
T 2z2n_A 64 ISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIREYELPNK 139 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred ECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEEEecCCCC
Confidence 56788877776667889999975 443 33332 1345678899999887 6776667889999998 444222223334
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeE-e-eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCce
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC-I-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~-~-~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~ 158 (648)
...+.++++.++++++++...++.|..||. +++.... . .....+.+++++++|.++++...++.|.+||. +.. +
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~--~ 215 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE--I 215 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC--E
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc--E
Confidence 567899999999988887777889999999 6665543 2 23456889999999987776666889999999 442 2
Q ss_pred EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCC
Q 006360 159 TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (648)
Q Consensus 159 ~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDl 208 (648)
..+....+...+.+++++++|++.++ ...++.|.+||+
T Consensus 216 ~~~~~~~~~~~~~~i~~~~~g~l~v~------------~~~~~~i~~~d~ 253 (299)
T 2z2n_A 216 TEFKIPTPNARPHAITAGAGIDLWFT------------EWGANKIGRLTS 253 (299)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEE------------ETTTTEEEEEET
T ss_pred EEEECCCCCCCceeEEECCCCCEEEe------------ccCCceEEEECC
Confidence 33333345577899999986654333 333566777765
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.11 E-value=2.7e-08 Score=100.11 Aligned_cols=188 Identities=10% Similarity=0.027 Sum_probs=130.2
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~ 81 (648)
++++|+++++...++.|.+||.. ++............+..+++.+++. ++++...++.|..||... ......+....
T Consensus 22 ~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~ 98 (299)
T 2z2n_A 22 VSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-VWFTENAANKIGRITKKG-IIKEYTLPNPD 98 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTS-CEEEEECSSTT
T ss_pred ECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-EEEeCCCCCeEEEECCCC-cEEEEeCCCcC
Confidence 57888877766557899999987 5543322122346788899999987 666666688999999873 32122222345
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006360 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (648)
Q Consensus 82 ~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~--~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~ 159 (648)
..+.++++.+++.++++...++.|.+||. +++..... .....+.+++++++|.++++...++.|.+||. +.. +.
T Consensus 99 ~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~--~~ 174 (299)
T 2z2n_A 99 SAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGD--IT 174 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC--EE
T ss_pred CCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCc--EE
Confidence 67899999999988888878889999998 55544332 23467899999999988777767789999998 432 22
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCC
Q 006360 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (648)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDl 208 (648)
.+....+...+.+++++++|++. ++...++.|.+||.
T Consensus 175 ~~~~~~~~~~~~~i~~~~~g~l~------------v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 175 EFKIPTPASGPVGITKGNDDALW------------FVEIIGNKIGRITT 211 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSSEE------------EEETTTTEEEEECT
T ss_pred EeeCCCCCCcceeEEECCCCCEE------------EEccCCceEEEECC
Confidence 23222345668889998865543 33334667777776
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.09 E-value=3.9e-09 Score=109.48 Aligned_cols=158 Identities=12% Similarity=0.132 Sum_probs=109.3
Q ss_pred CccCCCCEEEEEECC---------------------------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEE
Q 006360 1 MYNCKDEHLASISLS---------------------------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLL 53 (648)
Q Consensus 1 AFSpdG~~Lasgs~D---------------------------G~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lL 53 (648)
+|+|||+.|+.++.+ ..|++||+.+++.+..+.. . .+..++|+|++ ++
T Consensus 110 ~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg--~~ 184 (347)
T 2gop_A 110 EWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK--IV 184 (347)
T ss_dssp EECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE--EE
T ss_pred eECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe--EE
Confidence 489999999887642 5799999988876455554 2 56678999998 66
Q ss_pred EEEeCCC-------eEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCC--------CeEEEEeCCCCceeeE
Q 006360 54 VTAGDDG-------TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD--------KKLYTYDPGSRRPSSC 118 (648)
Q Consensus 54 aSgs~Dg-------~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~D--------g~I~IWDl~tgk~v~~ 118 (648)
+++..+. ...||.+.+++ ...+..+ ..+..+ +|||++|+.++.+ ..|++|| +++....
T Consensus 185 ~~~~~~~~~~~~~~~~~l~~~d~~~--~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 185 VNVPHREIIPQYFKFWDIYIWEDGK--EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp EEEECCCSSCCSSCCEEEEEEETTE--EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred EEEecccccccccccccEEEeCCCc--eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 6665542 33444443433 3344444 455544 8999998887754 3788898 5555444
Q ss_pred ee-CCCCeEE-EEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEcc
Q 006360 119 IT-YEAPFSS-LAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR 177 (648)
Q Consensus 119 ~~-h~~~I~s-lafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafsp 177 (648)
.. +...+.. +.|+ |+ ++++++.++.++|| +.++ .. ..+. .+...|.+++|++
T Consensus 258 ~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g-~~-~~~~--~~~~~v~~~~~s~ 311 (347)
T 2gop_A 258 LDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG-EI-KPIA--KGRHWIMGFDVDE 311 (347)
T ss_dssp STTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS-SE-EEEE--CSSSEEEEEEESS
T ss_pred cccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC-ce-EEEe--cCCCeEEeeeeeC
Confidence 43 4567775 8999 88 88899999999999 8743 33 2222 4577899999988
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.09 E-value=2.6e-09 Score=124.31 Aligned_cols=188 Identities=13% Similarity=0.002 Sum_probs=122.0
Q ss_pred CccCCCCEEEEEECC-----CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC--------------e
Q 006360 1 MYNCKDEHLASISLS-----GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--------------T 61 (648)
Q Consensus 1 AFSpdG~~Lasgs~D-----G~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg--------------~ 61 (648)
+|||||++||.+..+ ..|++||+.+++.+.... +...+..++|+|| +.++++ ..|+ .
T Consensus 169 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~--~~~~~~~~~wspD-~~l~~~-~~~~~~~~~~~~~~~~~~~ 244 (741)
T 1yr2_A 169 AASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL--KWVKFSGLAWLGN-DALLYS-RFAEPKEGQAFQALNYNQT 244 (741)
T ss_dssp EECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE--EEEESCCCEESTT-SEEEEE-ECCCC--------CCCCCE
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC--CCceeccEEEECC-CEEEEE-EecCcccccccccCCCCCE
Confidence 489999999877554 359999999988765322 1111245789999 754444 4443 3
Q ss_pred EEEEECCCCCce-eEEe--ccCCCCeEEEEEccCCCEEEEEeCCC-----eEEEEeCCCC--c-eeeEeeCCCCeEEEEE
Q 006360 62 LHLWDTTGRSPK-VSWL--KQHSAPTAGISFSSDDKIIASVGLDK-----KLYTYDPGSR--R-PSSCITYEAPFSSLAF 130 (648)
Q Consensus 62 V~IWDl~t~~~~-v~~l--~~H~~~V~slafsPdg~~LaSgs~Dg-----~I~IWDl~tg--k-~v~~~~h~~~I~slaf 130 (648)
|++|++.+.... ...+ ..+...+..+.|+|||++|+..+.++ .|++||+.++ + ...+..+...+....
T Consensus 245 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~- 323 (741)
T 1yr2_A 245 VWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV- 323 (741)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-
T ss_pred EEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-
Confidence 999999766521 1222 23334688999999999988877654 8999999887 5 444444554555553
Q ss_pred eCCCCEEEEEEc----CCeEEEEECCCCC-CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEc
Q 006360 131 IDDDWILTAGTS----NGRVVFYDIRGKP-QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILM 205 (648)
Q Consensus 131 sPdG~~Lasgs~----DG~V~IWDl~s~~-~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~Ikv 205 (648)
.|+|..|+..+. ++.|++||+.+.. ....++. .+...+.+++|. ++.++++...|+..++
T Consensus 324 ~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~~l~~~~~~-------------~~~lv~~~~~dg~~~l 388 (741)
T 1yr2_A 324 DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP--ESKDNLESVGIA-------------GNRLFASYIHDAKSQV 388 (741)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC--CCSSEEEEEEEE-------------BTEEEEEEEETTEEEE
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec--CCCCeEEEEEEE-------------CCEEEEEEEECCEEEE
Confidence 488998888876 3459999998742 2223332 344556666665 2234455555776666
Q ss_pred CCC
Q 006360 206 PDP 208 (648)
Q Consensus 206 WDl 208 (648)
|.+
T Consensus 389 ~~~ 391 (741)
T 1yr2_A 389 LAF 391 (741)
T ss_dssp EEE
T ss_pred EEE
Confidence 644
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.04 E-value=1.4e-08 Score=103.45 Aligned_cols=191 Identities=13% Similarity=0.151 Sum_probs=127.0
Q ss_pred CccCCCCEEEE-------EECCCcEEEEECCCCceeEEEe---CCCCCcEEEEEEccC-CCeEEEEEeCCCeEEEEECCC
Q 006360 1 MYNCKDEHLAS-------ISLSGDLILHNLASGAKAAELK---DPNEQVLRVLDYSRN-SRHLLVTAGDDGTLHLWDTTG 69 (648)
Q Consensus 1 AFSpdG~~Las-------gs~DG~V~IwDl~sg~~i~~l~---~~~~~~V~~Vafspd-g~~lLaSgs~Dg~V~IWDl~t 69 (648)
+|+++|+++++ +..++.|++||..+++...... ..+...+..+++.++ ++ ++++ ..++.|.+||..
T Consensus 24 ~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~-~~~~~l~~~d~~- 100 (314)
T 1pjx_A 24 VFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVA-DMRLGLLVVQTD- 100 (314)
T ss_dssp EECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEE-ETTTEEEEEETT-
T ss_pred eECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEE-ECCCCEEEEeCC-
Confidence 47788987777 5678899999987777543221 012345788999998 65 4444 445579999998
Q ss_pred CCceeEEe-cc-----CCCCeEEEEEccCCCEEEEEeCC---------------CeEEEEeCCCCceeeEeeCCCCeEEE
Q 006360 70 RSPKVSWL-KQ-----HSAPTAGISFSSDDKIIASVGLD---------------KKLYTYDPGSRRPSSCITYEAPFSSL 128 (648)
Q Consensus 70 ~~~~v~~l-~~-----H~~~V~slafsPdg~~LaSgs~D---------------g~I~IWDl~tgk~v~~~~h~~~I~sl 128 (648)
++ +..+ .. +...++++++.++++++++...+ +.|..||.. ++......+......+
T Consensus 101 g~--~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i 177 (314)
T 1pjx_A 101 GT--FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGI 177 (314)
T ss_dssp SC--EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEE
T ss_pred CC--EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceE
Confidence 54 2333 21 12458899999999988877665 578888876 6655544555567899
Q ss_pred EEe----CCCCEEEEE-EcCCeEEEEECCCCCCc--eEEEee-cCCC-CCeeEEEEccCCCeEEEeccCCCCeEEEEeeC
Q 006360 129 AFI----DDDWILTAG-TSNGRVVFYDIRGKPQP--LTVLRA-CSSS-EAVSSLCWQRAKPVFIDETTCKAETALLGGAV 199 (648)
Q Consensus 129 afs----PdG~~Lasg-s~DG~V~IWDl~s~~~~--~~~l~~-~~h~-~~VtsLafspdg~~Las~~~~~~~~~lvs~s~ 199 (648)
+|+ ++|+.|+++ ..++.|++||+...... ...+.. ..+. ..+..++++++|++ +++...
T Consensus 178 ~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l------------~v~~~~ 245 (314)
T 1pjx_A 178 AVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNL------------LVANWG 245 (314)
T ss_dssp EEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCE------------EEEEET
T ss_pred EEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCE------------EEEEcC
Confidence 999 999766655 46789999998621111 112221 1333 56788888886544 344445
Q ss_pred CCeEEcCCCC
Q 006360 200 GDSILMPDPL 209 (648)
Q Consensus 200 D~~IkvWDlr 209 (648)
++.|.+||+.
T Consensus 246 ~~~i~~~d~~ 255 (314)
T 1pjx_A 246 SSHIEVFGPD 255 (314)
T ss_dssp TTEEEEECTT
T ss_pred CCEEEEEcCC
Confidence 7788899875
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.04 E-value=3.6e-09 Score=122.10 Aligned_cols=197 Identities=11% Similarity=0.052 Sum_probs=127.6
Q ss_pred CccCCCCEEEEEECCCc-------------EEEEECCCCce--eEEEeC-CCCCcEEEEEEccCCCeEEEEEeCC-C--e
Q 006360 1 MYNCKDEHLASISLSGD-------------LILHNLASGAK--AAELKD-PNEQVLRVLDYSRNSRHLLVTAGDD-G--T 61 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~-------------V~IwDl~sg~~--i~~l~~-~~~~~V~~Vafspdg~~lLaSgs~D-g--~ 61 (648)
+|+|||+.|+.++.|.. |++|++.++.. ...+.. .+...+..+.|+|||+.++++...+ + .
T Consensus 174 ~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 253 (695)
T 2bkl_A 174 KWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEND 253 (695)
T ss_dssp EECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEE
T ss_pred EEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceE
Confidence 58999999999988776 99999987762 222222 1334677899999999555554443 2 6
Q ss_pred EEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEe---CCCeEEEEeCCCCce---eeEeeC--CCCeEEEEEeCC
Q 006360 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVG---LDKKLYTYDPGSRRP---SSCITY--EAPFSSLAFIDD 133 (648)
Q Consensus 62 V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs---~Dg~I~IWDl~tgk~---v~~~~h--~~~I~slafsPd 133 (648)
|++||..++. ...+..+...+....| +++.+++... .++.|++||+.++.. ..++.+ ...+..++|+ +
T Consensus 254 l~~~~~~~~~--~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~ 329 (695)
T 2bkl_A 254 VYWKRPGEKD--FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-G 329 (695)
T ss_dssp EEEECTTCSS--CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-T
T ss_pred EEEEcCCCCc--eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-C
Confidence 7777665544 4455566666777777 5666444443 257999999988753 444443 4457888888 6
Q ss_pred CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 134 DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 134 G~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
+.++++...|+..+||.+.........+.. .+.+.|..+++++++..++... -+....+.|++||+..
T Consensus 330 ~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~~~~v~~~~~s~d~~~l~~~~--------ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 330 GHLSLEYLKDATSEVRVATLKGKPVRTVQL-PGVGAASNLMGLEDLDDAYYVF--------TSFTTPRQIYKTSVST 397 (695)
T ss_dssp TEEEEEEEETTEEEEEEEETTCCEEEECCC-SSSSEECCCBSCTTCSEEEEEE--------EETTEEEEEEEEETTT
T ss_pred CEEEEEEEECCEEEEEEEeCCCCeeEEecC-CCCeEEEEeecCCCCCEEEEEE--------cCCCCCCEEEEEECCC
Confidence 778888889998887765522222333331 2256677888888776655431 1222356788888754
No 199
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.01 E-value=7.5e-08 Score=109.07 Aligned_cols=194 Identities=14% Similarity=0.077 Sum_probs=136.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECC--CCceeEEEeCCCCCcEEEEEEc----cCCCeEEEEEeCCCeEEEEECCCCCcee
Q 006360 1 MYNCKDEHLASISLSGDLILHNLA--SGAKAAELKDPNEQVLRVLDYS----RNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~--sg~~i~~l~~~~~~~V~~Vafs----pdg~~lLaSgs~Dg~V~IWDl~t~~~~v 74 (648)
+|+|||+++++++.|+.|.+||+. +++.+.++.. +.....++|+ |+|++++++...++.|.|||..+.+. +
T Consensus 203 ~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~-~ 279 (567)
T 1qks_A 203 RLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP-K 279 (567)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE-E
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE-E
Confidence 489999999999999999999995 8888888874 3345679999 69997777777889999999988774 3
Q ss_pred EEecc----------CCC-CeEEEEEccCCC-EEEEEeCCCeEEEEeCCCCcee--eEeeCCCCeEEEEEeCCCCEEEEE
Q 006360 75 SWLKQ----------HSA-PTAGISFSSDDK-IIASVGLDKKLYTYDPGSRRPS--SCITYEAPFSSLAFIDDDWILTAG 140 (648)
Q Consensus 75 ~~l~~----------H~~-~V~slafsPdg~-~LaSgs~Dg~I~IWDl~tgk~v--~~~~h~~~I~slafsPdG~~Lasg 140 (648)
..+.. |.. .+..+.+++++. +++....+|.|.++|..+.+.. ..+.......++.|+|+|++++++
T Consensus 280 ~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va 359 (567)
T 1qks_A 280 KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITA 359 (567)
T ss_dssp EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEE
T ss_pred EEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEE
Confidence 33221 222 678888888655 4555667799999999876533 334456677889999999998876
Q ss_pred E-cCCeEEEEECCCCCCceEEEee-c--CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEee-CCCeEEcCCCCC
Q 006360 141 T-SNGRVVFYDIRGKPQPLTVLRA-C--SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGA-VGDSILMPDPLP 210 (648)
Q Consensus 141 s-~DG~V~IWDl~s~~~~~~~l~~-~--~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s-~D~~IkvWDlr~ 210 (648)
. .++.|.+||+.+. +....+.. . .|.+....+ ++|++ +.+++++. .++.|.++|..+
T Consensus 360 ~~~sn~V~ViD~~t~-kl~~~i~vgg~~Phpg~g~~~-~~p~~-----------g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 360 ANARNKLVVIDTKEG-KLVAIEDTGGQTPHPGRGANF-VHPTF-----------GPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EGGGTEEEEEETTTT-EEEEEEECSSSSBCCTTCEEE-EETTT-----------EEEEEEEBSSSSEEEEEECCT
T ss_pred eCCCCeEEEEECCCC-cEEEEEeccCcCCCCccceee-ECCCC-----------CcEEEeCCCCCCeEEEecCCC
Confidence 6 5788999999987 34444432 1 232222222 46642 22333333 367888888776
No 200
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.00 E-value=1.3e-07 Score=95.06 Aligned_cols=187 Identities=7% Similarity=-0.030 Sum_probs=128.5
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~-~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
+.++|+++++...++.|.+||.. ++.. .+.. .....+..+++.+++. ++++...++.|..||.. +......+...
T Consensus 69 ~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~ 144 (300)
T 2qc5_A 69 VSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIYEYDLPNK 144 (300)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECSST
T ss_pred ECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEEEccCCCC
Confidence 46778877766567889999986 6553 3332 1345678899999887 66666668899999987 44222223334
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe--eCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCce
Q 006360 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~--~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~ 158 (648)
...+.++++.++++++++...++.|..||. +++..... .....+.+++++++|+++++...++.|.+||.... .
T Consensus 145 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~---~ 220 (300)
T 2qc5_A 145 GSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGE---I 220 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCC---E
T ss_pred CCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCc---E
Confidence 567899999999997777766889999998 56544322 23456889999999987776666778999998322 2
Q ss_pred EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCC
Q 006360 159 TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (648)
Q Consensus 159 ~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDl 208 (648)
..+....+...+.+++++++|++. ++...++.|..||.
T Consensus 221 ~~~~~~~~~~~~~~i~~d~~g~l~------------v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 221 SEYDIPTPNARPHAITAGKNSEIW------------FTEWGANQIGRITN 258 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEE------------EEETTTTEEEEECT
T ss_pred EEEECCCCCCCceEEEECCCCCEE------------EeccCCCeEEEECC
Confidence 222222345678899998865543 33334567777776
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.00 E-value=1.5e-07 Score=94.66 Aligned_cols=188 Identities=8% Similarity=-0.043 Sum_probs=129.1
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~ 81 (648)
+.++|+.+++...++.|.+||.. ++............+..+++.+++. ++++...++.|.+||.. +......+....
T Consensus 27 ~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~ 103 (300)
T 2qc5_A 27 SSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD-IWFTENGANKIGKLSKK-GGFTEYPLPQPD 103 (300)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEECSSTT
T ss_pred ECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCC-EEEEecCCCeEEEECCC-CCeEEecCCCCC
Confidence 56788877766678899999986 5544321122335678899999887 66666667899999988 442222223344
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeE-ee-CCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006360 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC-IT-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (648)
Q Consensus 82 ~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~-~~-h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~ 159 (648)
..+.++++.++++++++...++.|..||.. ++.... +. ....+.+++++++|+++++...++.|.+||.. .. ..
T Consensus 104 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~--~~ 179 (300)
T 2qc5_A 104 SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNT-GK--LE 179 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CC--EE
T ss_pred CCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCC-Cc--EE
Confidence 678999999999988887778899999987 655432 22 34678999999999966666667889999983 32 22
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCC
Q 006360 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (648)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDl 208 (648)
.+....+...+.+++++++|.+.++ ....+.|.+||.
T Consensus 180 ~~~~~~~~~~~~~i~~d~~g~l~v~------------~~~~~~i~~~~~ 216 (300)
T 2qc5_A 180 EYPLPTNAAAPVGITSGNDGALWFV------------EIMGNKIGRITT 216 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEE------------ETTTTEEEEECT
T ss_pred EeeCCCCCCCcceEEECCCCCEEEE------------ccCCCEEEEEcC
Confidence 2332244567889999886554433 333556777765
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.97 E-value=4.2e-08 Score=99.95 Aligned_cols=188 Identities=15% Similarity=0.177 Sum_probs=123.2
Q ss_pred ccCC-CCEEEEEECCCcEEEEECCCCceeEE-EeC---CCCCcEEEEEEccCCCeEEEEEeCC---------------Ce
Q 006360 2 YNCK-DEHLASISLSGDLILHNLASGAKAAE-LKD---PNEQVLRVLDYSRNSRHLLVTAGDD---------------GT 61 (648)
Q Consensus 2 FSpd-G~~Lasgs~DG~V~IwDl~sg~~i~~-l~~---~~~~~V~~Vafspdg~~lLaSgs~D---------------g~ 61 (648)
|+++ |++++ ++.++.|.+||.. ++.... ... .....+.++++.++++ ++++...+ +.
T Consensus 78 ~~~~~g~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~ 154 (314)
T 1pjx_A 78 CDRDANQLFV-ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGS 154 (314)
T ss_dssp ECSSSSEEEE-EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEE
T ss_pred EecCCCcEEE-EECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCe
Confidence 5677 55444 4445579999987 665432 221 1123477899999997 56655544 56
Q ss_pred EEEEECCCCCceeEEeccCCCCeEEEEEc----cCCCEEEEE-eCCCeEEEEeCC-CCcee-----eEee-CC-CCeEEE
Q 006360 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFS----SDDKIIASV-GLDKKLYTYDPG-SRRPS-----SCIT-YE-APFSSL 128 (648)
Q Consensus 62 V~IWDl~t~~~~v~~l~~H~~~V~slafs----Pdg~~LaSg-s~Dg~I~IWDl~-tgk~v-----~~~~-h~-~~I~sl 128 (648)
|+.||.. +. ...+..+......++|+ ++++.|+.+ ..++.|++||+. +++.. ..+. +. ..+..+
T Consensus 155 l~~~~~~-g~--~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i 231 (314)
T 1pjx_A 155 IYCFTTD-GQ--MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM 231 (314)
T ss_dssp EEEECTT-SC--EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE
T ss_pred EEEECCC-CC--EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCce
Confidence 7777765 33 23333344557899999 998765554 567899999986 44421 1121 22 567889
Q ss_pred EEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCC
Q 006360 129 AFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (648)
Q Consensus 129 afsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDl 208 (648)
+++++|+++++...++.|.+||..++. ....+. .+...+.+++|+++|++| +++...++.|..|++
T Consensus 232 ~~d~~G~l~v~~~~~~~i~~~d~~~g~-~~~~~~--~~~~~~~~i~~~~dg~~l-----------~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 232 DFDEDNNLLVANWGSSHIEVFGPDGGQ-PKMRIR--CPFEKPSNLHFKPQTKTI-----------FVTEHENNAVWKFEW 297 (314)
T ss_dssp EEBTTCCEEEEEETTTEEEEECTTCBS-CSEEEE--CSSSCEEEEEECTTSSEE-----------EEEETTTTEEEEEEC
T ss_pred EECCCCCEEEEEcCCCEEEEEcCCCCc-EeEEEe--CCCCCceeEEECCCCCEE-----------EEEeCCCCeEEEEeC
Confidence 999999988888788999999998542 334444 345789999999876643 333344567777776
Q ss_pred C
Q 006360 209 L 209 (648)
Q Consensus 209 r 209 (648)
.
T Consensus 298 ~ 298 (314)
T 1pjx_A 298 Q 298 (314)
T ss_dssp S
T ss_pred C
Confidence 5
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.90 E-value=8.7e-08 Score=103.90 Aligned_cols=188 Identities=7% Similarity=0.018 Sum_probs=124.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC--eEEEEECCCCCceeEEe-
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSWL- 77 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg--~V~IWDl~t~~~~v~~l- 77 (648)
+|+++|+++++...++.|++||..++........ ..... ++|+++++ .|+.+..++ .|++||..+... ...+
T Consensus 137 a~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~--~~~~~-ia~~~~g~-~l~~~d~~~~~~I~~~d~~~~~~-~~~~g 211 (409)
T 3hrp_A 137 AAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG--FKGGK-PAVTKDKQ-RVYSIGWEGTHTVYVYMKASGWA-PTRIG 211 (409)
T ss_dssp EECSTTEEEEEETTTTEEEEEETTTTEEEEEEET--CCBCB-CEECTTSS-EEEEEBSSTTCEEEEEEGGGTTC-EEEEE
T ss_pred EEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc--CCCCc-eeEecCCC-cEEEEecCCCceEEEEEcCCCce-eEEee
Confidence 4778888777766778999999977766554443 22334 89999998 566666655 899999876553 2222
Q ss_pred ---ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeE----e-eCCCCe--EEEEEeCC-CCEEEEEEcCCeE
Q 006360 78 ---KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC----I-TYEAPF--SSLAFIDD-DWILTAGTSNGRV 146 (648)
Q Consensus 78 ---~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~----~-~h~~~I--~slafsPd-G~~Lasgs~DG~V 146 (648)
..+...+++++++|++..|+.+..++.|+.||..++..... . ...... ..++|+|+ +.++++-..++.|
T Consensus 212 ~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I 291 (409)
T 3hrp_A 212 QLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSV 291 (409)
T ss_dssp ECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEE
T ss_pred eccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEE
Confidence 22456788999999555566677889999999987764333 1 112222 39999995 5555555667899
Q ss_pred EEEECCCCCCceEEEeecC-------------CCCCeeEEEEccCCCeEEEeccCCCCeEEEEee-CCCeEEcCCC
Q 006360 147 VFYDIRGKPQPLTVLRACS-------------SSEAVSSLCWQRAKPVFIDETTCKAETALLGGA-VGDSILMPDP 208 (648)
Q Consensus 147 ~IWDl~s~~~~~~~l~~~~-------------h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s-~D~~IkvWDl 208 (648)
+.||.... ...+.... .-.....++|+++|+++ ++.. .++.|+.||+
T Consensus 292 ~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ly------------vad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 292 YKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFY------------IVDGFKGYCLRKLDI 352 (409)
T ss_dssp EEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEE------------EEETTTTCEEEEEET
T ss_pred EEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEE------------EEeCCCCCEEEEEEC
Confidence 99998754 23332111 02347789999866544 3344 5677888875
No 204
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.90 E-value=2.7e-07 Score=96.31 Aligned_cols=186 Identities=12% Similarity=0.029 Sum_probs=119.3
Q ss_pred CccCCCCE-EEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006360 1 MYNCKDEH-LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (648)
Q Consensus 1 AFSpdG~~-Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~ 79 (648)
+|++++.. +++...++.|++||..+++. ..+. ....+.+++|.++++ ++++ .. ..|++||..++.. ..+..
T Consensus 55 ~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~--~~~~v~~i~~~~dg~-l~v~-~~-~gl~~~d~~~g~~--~~~~~ 126 (326)
T 2ghs_A 55 TFDPASGTAWWFNILERELHELHLASGRK-TVHA--LPFMGSALAKISDSK-QLIA-SD-DGLFLRDTATGVL--TLHAE 126 (326)
T ss_dssp EEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEE--CSSCEEEEEEEETTE-EEEE-ET-TEEEEEETTTCCE--EEEEC
T ss_pred eEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEE--CCCcceEEEEeCCCe-EEEE-EC-CCEEEEECCCCcE--EEEee
Confidence 47887654 45555678999999876654 3343 235688899999987 4554 34 4499999987763 22222
Q ss_pred C-----CCCeEEEEEccCCCEEEEEeC------CCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEE-cCCeEE
Q 006360 80 H-----SAPTAGISFSSDDKIIASVGL------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT-SNGRVV 147 (648)
Q Consensus 80 H-----~~~V~slafsPdg~~LaSgs~------Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs-~DG~V~ 147 (648)
. ...+++++++|+|+++++... .+.|+.+| +++.............++|+|||+.|+.+. .++.|.
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 1 235889999999997765542 25677777 565544444445678999999998776554 568899
Q ss_pred EEECC--CC-CC-ceEEEeec-CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCC
Q 006360 148 FYDIR--GK-PQ-PLTVLRAC-SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (648)
Q Consensus 148 IWDl~--s~-~~-~~~~l~~~-~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDl 208 (648)
+||+. ++ .. ....+... .....+.+++++++|.+. ++...++.|.+||+
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lw------------va~~~~~~v~~~d~ 258 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW------------NARWGEGAVDRYDT 258 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE------------EEEETTTEEEEECT
T ss_pred EEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEE------------EEEeCCCEEEEECC
Confidence 99986 33 11 11222211 234556778887765443 33334567777776
No 205
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.89 E-value=4.8e-08 Score=100.60 Aligned_cols=173 Identities=12% Similarity=0.060 Sum_probs=115.8
Q ss_pred CccCCCC-EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006360 1 MYNCKDE-HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (648)
Q Consensus 1 AFSpdG~-~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~ 79 (648)
+|+++|+ ++++...++.|+.|+. +++. ..+.. ....+..++|.++++ ++++...++.|.+||.. +. +..+..
T Consensus 51 ~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~-~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~-g~--~~~~~~ 123 (305)
T 3dr2_A 51 AWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLD-ATAFTNGNAVDAQQR-LVHCEHGRRAITRSDAD-GQ--AHLLVG 123 (305)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEE-SCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SC--EEEEEC
T ss_pred eEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeC-CCCccceeeECCCCC-EEEEECCCCEEEEECCC-CC--EEEEEe
Confidence 4789998 4556667789999997 5553 33432 445678899999998 66655556889999986 33 222211
Q ss_pred C-----CCCeEEEEEccCCCEEEE----EeC-------------CCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEE
Q 006360 80 H-----SAPTAGISFSSDDKIIAS----VGL-------------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWIL 137 (648)
Q Consensus 80 H-----~~~V~slafsPdg~~LaS----gs~-------------Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~L 137 (648)
+ ...++++++.++|+++++ +.. .+.|+.||..+++..... .......++|+||++.|
T Consensus 124 ~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~l 202 (305)
T 3dr2_A 124 RYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTL 202 (305)
T ss_dssp EETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEE
T ss_pred ccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEE
Confidence 1 234778999999998886 332 357888998777765544 44567889999999988
Q ss_pred EEEEcC------CeEEEEECCCCCC-ceEEEeecCCCCCeeEEEEccCCCeE
Q 006360 138 TAGTSN------GRVVFYDIRGKPQ-PLTVLRACSSSEAVSSLCWQRAKPVF 182 (648)
Q Consensus 138 asgs~D------G~V~IWDl~s~~~-~~~~l~~~~h~~~VtsLafspdg~~L 182 (648)
+++... +.|++||+..... ....+.. ...+....++++++|++.
T Consensus 203 yv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~-~~~~~pdgi~~d~~G~lw 253 (305)
T 3dr2_A 203 YVSQTPEQGHGSVEITAFAWRDGALHDRRHFAS-VPDGLPDGFCVDRGGWLW 253 (305)
T ss_dssp EEEECCC---CCCEEEEEEEETTEEEEEEEEEC-CSSSCCCSEEECTTSCEE
T ss_pred EEEecCCcCCCCCEEEEEEecCCCccCCeEEEE-CCCCCCCeEEECCCCCEE
Confidence 887765 6899999875420 0111211 123445567787766643
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.89 E-value=2.2e-07 Score=95.32 Aligned_cols=191 Identities=9% Similarity=0.042 Sum_probs=120.7
Q ss_pred CccCCCCE-EEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE-ec
Q 006360 1 MYNCKDEH-LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW-LK 78 (648)
Q Consensus 1 AFSpdG~~-Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~-l~ 78 (648)
+|++++.. +++...++.|+.||..+++. ..+. ....+.+++|+++++ ++++ . ++.|.+||..++...... ..
T Consensus 19 ~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~--~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d~~~g~~~~~~~~~ 92 (297)
T 3g4e_A 19 VWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT--MDAPVSSVALRQSGG-YVAT-I-GTKFCALNWKEQSAVVLATVD 92 (297)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE--CSSCEEEEEEBTTSS-EEEE-E-TTEEEEEETTTTEEEEEEECC
T ss_pred eEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe--CCCceEEEEECCCCC-EEEE-E-CCeEEEEECCCCcEEEEEecC
Confidence 37786554 45555678999999977665 3343 345788999999998 5544 3 578999999876532111 11
Q ss_pred c--CCCCeEEEEEccCCCEEEEEeC-----------CCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEE-EcCC
Q 006360 79 Q--HSAPTAGISFSSDDKIIASVGL-----------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAG-TSNG 144 (648)
Q Consensus 79 ~--H~~~V~slafsPdg~~LaSgs~-----------Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasg-s~DG 144 (648)
. ....+++++++|+|+++++... .+.|+.+|.. ++.............++|+||++.|+.. +.++
T Consensus 93 ~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~ 171 (297)
T 3g4e_A 93 NDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSY 171 (297)
T ss_dssp TTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGT
T ss_pred CCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCCC
Confidence 1 1234789999999997765432 2345555543 4444444445567899999999877554 5578
Q ss_pred eEEEEECC--CCCCc-eEEEeec-CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 145 RVVFYDIR--GKPQP-LTVLRAC-SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 145 ~V~IWDl~--s~~~~-~~~l~~~-~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
.|.+||+. ++... .+.+... .+.+....++++++|++ +++...++.|.+||+..
T Consensus 172 ~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~l------------wva~~~~~~v~~~d~~t 229 (297)
T 3g4e_A 172 SVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKL------------WVACYNGGRVIRLDPVT 229 (297)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCE------------EEEEETTTEEEEECTTT
T ss_pred cEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCE------------EEEEcCCCEEEEEcCCC
Confidence 89999984 33110 1222211 23356778888886544 34444466788888753
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.87 E-value=2.8e-07 Score=94.58 Aligned_cols=177 Identities=12% Similarity=0.083 Sum_probs=115.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCC---CCCcEEEEEEccCCCeEEEEEeC---------CCeEEEEECC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDP---NEQVLRVLDYSRNSRHLLVTAGD---------DGTLHLWDTT 68 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~---~~~~V~~Vafspdg~~lLaSgs~---------Dg~V~IWDl~ 68 (648)
+|+++|+++++ . ++.|.+||..+++........ ....++++++.++|+ ++++... .....||.+.
T Consensus 60 ~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d 136 (297)
T 3g4e_A 60 ALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLF 136 (297)
T ss_dssp EEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEEC
T ss_pred EECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEE
Confidence 46789995554 3 567999999877654332211 234578899999998 5554322 1234455553
Q ss_pred CCCceeEEeccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEeC--CCCcee--eEe----eCCCCeEEEEEeCCCCEEEE
Q 006360 69 GRSPKVSWLKQHSAPTAGISFSSDDKIIA-SVGLDKKLYTYDP--GSRRPS--SCI----TYEAPFSSLAFIDDDWILTA 139 (648)
Q Consensus 69 t~~~~v~~l~~H~~~V~slafsPdg~~La-Sgs~Dg~I~IWDl--~tgk~v--~~~----~h~~~I~slafsPdG~~Las 139 (648)
.... +..+..+....+.++|+|+++.|+ +.+.++.|++||+ .++... ..+ .....+..++++++|++.++
T Consensus 137 ~~g~-~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva 215 (297)
T 3g4e_A 137 PDHH-VKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVA 215 (297)
T ss_dssp TTSC-EEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEE
T ss_pred CCCC-EEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEE
Confidence 3221 223334445578999999998665 4556789999987 455432 122 13356789999999988888
Q ss_pred EEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEc-cCCCeEEE
Q 006360 140 GTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQ-RAKPVFID 184 (648)
Q Consensus 140 gs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafs-pdg~~Las 184 (648)
...++.|.+||..++ +.+..+. .+...+++++|. |+++.|..
T Consensus 216 ~~~~~~v~~~d~~tG-~~~~~i~--~p~~~~t~~~f~g~d~~~L~v 258 (297)
T 3g4e_A 216 CYNGGRVIRLDPVTG-KRLQTVK--LPVDKTTSCCFGGKNYSEMYV 258 (297)
T ss_dssp EETTTEEEEECTTTC-CEEEEEE--CSSSBEEEEEEESGGGCEEEE
T ss_pred EcCCCEEEEEcCCCc-eEEEEEE--CCCCCceEEEEeCCCCCEEEE
Confidence 777889999999866 3344444 345679999998 77655433
No 208
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.86 E-value=7e-07 Score=95.63 Aligned_cols=194 Identities=12% Similarity=0.002 Sum_probs=117.3
Q ss_pred CccCCCCEEEEEE----------CCCcEEEEECCCCceeEEEeCC-C-----CCcEEEEEEccCCCeEEEEEeC-CCeEE
Q 006360 1 MYNCKDEHLASIS----------LSGDLILHNLASGAKAAELKDP-N-----EQVLRVLDYSRNSRHLLVTAGD-DGTLH 63 (648)
Q Consensus 1 AFSpdG~~Lasgs----------~DG~V~IwDl~sg~~i~~l~~~-~-----~~~V~~Vafspdg~~lLaSgs~-Dg~V~ 63 (648)
+|+|||++|+++. .++.|.+||..+.+.+..+... . ...-..+.|+||+++++++... ++.|.
T Consensus 72 ~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~ 151 (373)
T 2mad_H 72 VAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVG 151 (373)
T ss_pred EECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEE
Confidence 5899999998875 3678999999988888877532 0 1223468999999954444333 58899
Q ss_pred EEECCCCCceeEE-eccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEeCCCCcee-------------------------
Q 006360 64 LWDTTGRSPKVSW-LKQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPGSRRPS------------------------- 116 (648)
Q Consensus 64 IWDl~t~~~~v~~-l~~H~~~V~slafsPdg-~~LaSgs~Dg~I~IWDl~tgk~v------------------------- 116 (648)
++| .+++. +.. +. ... |+.+.|++ +.+++.+.||.+.+||. +++.+
T Consensus 152 viD-~t~~~-~~~~i~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 152 LVV-QGGSS-DDQLLS-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred EEE-CCCCE-EeEEcC-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecC
Confidence 999 88764 333 22 111 12233322 23333344444444444 33221
Q ss_pred -------------------------eEee-----------CCCCeEEEEEeCCCCEEEEEEc----------CCeEEEEE
Q 006360 117 -------------------------SCIT-----------YEAPFSSLAFIDDDWILTAGTS----------NGRVVFYD 150 (648)
Q Consensus 117 -------------------------~~~~-----------h~~~I~slafsPdG~~Lasgs~----------DG~V~IWD 150 (648)
..+. .......+++++|++.+++... ++.|.++|
T Consensus 225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 1110 0111233778888888887653 35799999
Q ss_pred CCCCCCceEEEeecCCCCCeeEEEEccCCC-eEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCccc
Q 006360 151 IRGKPQPLTVLRACSSSEAVSSLCWQRAKP-VFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (648)
Q Consensus 151 l~s~~~~~~~l~~~~h~~~VtsLafspdg~-~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss 216 (648)
+.+. +.+..+. ......+++|+|||+ +++++ ...++.|.+||+........
T Consensus 305 ~~t~-~vv~~i~---~g~~p~~i~~s~Dg~~~l~v~-----------~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 305 GLVG-QTSSQIS---LGHDVDAISVAQDGGPDLYAL-----------SAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCC-EEEEEEE---CCCCcCeEEECCCCCeEEEEE-----------cCCCCeEEEEECCCCCEEee
Confidence 9887 3334443 344689999999877 34333 22378888998876555433
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.83 E-value=7.3e-08 Score=111.35 Aligned_cols=176 Identities=13% Similarity=0.059 Sum_probs=112.5
Q ss_pred CccCCCCEEEEEEC-----CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCC-------------CeE
Q 006360 1 MYNCKDEHLASISL-----SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD-------------GTL 62 (648)
Q Consensus 1 AFSpdG~~Lasgs~-----DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~D-------------g~V 62 (648)
+|||||++||.+.. +..|++||+.+++.+..... ......++|+ |++.++++ ..+ ..|
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~--~~k~~~~~Ws-Dg~~l~y~-~~~~~~~~~~~~~~~~~~v 210 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK--DVKFSGISWL-GNEGFFYS-SYDKPDGSELSARTDQHKV 210 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE--EEESCCCEEE-TTTEEEEE-ESSCCC-------CCCCEE
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccC--CceeccEEEe-CCCEEEEE-EecCcccccccccCCCcEE
Confidence 48999999885432 24799999999986553211 1112457899 99854444 444 349
Q ss_pred EEEECCCCCce---eEEecc-CCCCeEEEEEccCCCEEEEEeC----CCeEEEEeCCCC--ceeeEeeCCCCeEEEEEeC
Q 006360 63 HLWDTTGRSPK---VSWLKQ-HSAPTAGISFSSDDKIIASVGL----DKKLYTYDPGSR--RPSSCITYEAPFSSLAFID 132 (648)
Q Consensus 63 ~IWDl~t~~~~---v~~l~~-H~~~V~slafsPdg~~LaSgs~----Dg~I~IWDl~tg--k~v~~~~h~~~I~slafsP 132 (648)
++|++.+.... +..... |...+..+.|+||+++|+.... +..|++||+.++ +...+..+....... |++
T Consensus 211 ~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~ 289 (693)
T 3iuj_A 211 YFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDN 289 (693)
T ss_dssp EEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEE
T ss_pred EEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Eec
Confidence 99999765421 222233 4556788999999998865443 248999999876 344444455555554 667
Q ss_pred CCCEEEEEEc----CCeEEEEECCCCCC-ceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006360 133 DDWILTAGTS----NGRVVFYDIRGKPQ-PLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 133 dG~~Lasgs~----DG~V~IWDl~s~~~-~~~~l~~~~h~~~VtsLafspdg~~Las~ 185 (648)
+|..|+..+. .+.|.+||+.+... ..+.+. .|...+. .|++++++|+..
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~--~~s~~g~~lv~~ 343 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI--PERQQVL--TVHSGSGYLFAE 343 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--CCCSSCE--EEEEETTEEEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe--cCCCCEE--EEEEECCEEEEE
Confidence 7776665553 36799999987632 123343 3444454 788877666554
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.82 E-value=3.2e-07 Score=99.41 Aligned_cols=191 Identities=10% Similarity=0.066 Sum_probs=123.8
Q ss_pred CccCCCCEEEEEECCC--cEEEEECCCCceeEEE---eCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE
Q 006360 1 MYNCKDEHLASISLSG--DLILHNLASGAKAAEL---KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG--~V~IwDl~sg~~i~~l---~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~ 75 (648)
+|++++++|+++..++ .|++|+...+.....+ .......+++++++|++..+++ +..++.|+.||..+....+.
T Consensus 177 a~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 177 AVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEE
T ss_pred eEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEE
Confidence 4789999998888766 7999998665544333 1113455677899995553444 67789999999987763221
Q ss_pred E---eccCCCCe-E-EEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeEeeC---------------CCCeEEEEEeCCC
Q 006360 76 W---LKQHSAPT-A-GISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCITY---------------EAPFSSLAFIDDD 134 (648)
Q Consensus 76 ~---l~~H~~~V-~-slafsP-dg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h---------------~~~I~slafsPdG 134 (648)
. ..++.... . .++|+| ++.++++-..++.|+.||.... .....++ ......++|+++|
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG 334 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG 334 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC
Confidence 0 22222222 3 999999 4666666677889999997643 3333332 2457899999999
Q ss_pred CEEEEEE-cCCeEEEEECCCCCCceEEEeec-C------------CCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCC
Q 006360 135 WILTAGT-SNGRVVFYDIRGKPQPLTVLRAC-S------------SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVG 200 (648)
Q Consensus 135 ~~Lasgs-~DG~V~IWDl~s~~~~~~~l~~~-~------------h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D 200 (648)
+++++-. .++.|++||+.++. +..+... . .-.....|+++++|. ++++....
T Consensus 335 ~lyvad~~~~~~I~~~~~~~G~--v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~------------lyVad~~n 400 (409)
T 3hrp_A 335 NFYIVDGFKGYCLRKLDILDGY--VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG------------YWIAEAWG 400 (409)
T ss_dssp CEEEEETTTTCEEEEEETTTTE--EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE------------EEEEESTT
T ss_pred CEEEEeCCCCCEEEEEECCCCE--EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC------------EEEEECCC
Confidence 9777777 78999999976552 2333211 0 024578888888544 44444445
Q ss_pred CeEEcCC
Q 006360 201 DSILMPD 207 (648)
Q Consensus 201 ~~IkvWD 207 (648)
+.|+.++
T Consensus 401 ~~Ir~i~ 407 (409)
T 3hrp_A 401 KAIRKYA 407 (409)
T ss_dssp CEEEEEE
T ss_pred CeEEEEE
Confidence 6666543
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.82 E-value=1.7e-07 Score=108.83 Aligned_cols=198 Identities=13% Similarity=0.101 Sum_probs=126.3
Q ss_pred CccCCCCEEEEEECCCc--------------EEEEECCCCce--eEEEeCC-CCCcEEEEEEccCCCeEEEEEeC----C
Q 006360 1 MYNCKDEHLASISLSGD--------------LILHNLASGAK--AAELKDP-NEQVLRVLDYSRNSRHLLVTAGD----D 59 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~--------------V~IwDl~sg~~--i~~l~~~-~~~~V~~Vafspdg~~lLaSgs~----D 59 (648)
+|+|| +.|+.+..++. |++|++.++.. ...+... +...+..+.|+|||+.++++... +
T Consensus 215 ~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 293 (741)
T 1yr2_A 215 AWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPV 293 (741)
T ss_dssp EESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSC
T ss_pred EEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCc
Confidence 48999 99988877654 89999877652 2223321 22347789999999955554432 3
Q ss_pred CeEEEEECCCCCce-eEEeccCCCCeEEEEEccCCCEEEEEeCC----CeEEEEeCCCC--ceeeEee-CCCCeEEEEEe
Q 006360 60 GTLHLWDTTGRSPK-VSWLKQHSAPTAGISFSSDDKIIASVGLD----KKLYTYDPGSR--RPSSCIT-YEAPFSSLAFI 131 (648)
Q Consensus 60 g~V~IWDl~t~~~~-v~~l~~H~~~V~slafsPdg~~LaSgs~D----g~I~IWDl~tg--k~v~~~~-h~~~I~slafs 131 (648)
..|++||+.++... ...+..+...+.... .|++..|+..+++ +.|++||+.++ +...++. +...+..+.|.
T Consensus 294 ~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~ 372 (741)
T 1yr2_A 294 NTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA 372 (741)
T ss_dssp CEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE
T ss_pred ceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE
Confidence 48999999776212 344555555555554 4889888888764 45999999874 3444444 33446677887
Q ss_pred CCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 132 DDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 132 PdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
++.++++...|+..+||.+.........+.. .+.+.|..+.++++++.++... -+....+.|++||+..
T Consensus 373 -~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~~~~v~~~~~s~d~~~l~~~~--------ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 373 -GNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-PGIGSASGLSGRPGDRHAYLSF--------SSFTQPATVLALDPAT 441 (741)
T ss_dssp -BTEEEEEEEETTEEEEEEEETTSCEEEECBC-SSSCEEEEEECCBTCSCEEEEE--------EETTEEEEEEEEETTT
T ss_pred -CCEEEEEEEECCEEEEEEEeCCCCceeeccC-CCCeEEEEeecCCCCCEEEEEE--------cCCCCCCEEEEEECCC
Confidence 5667788888988777655422222333331 2356788899999876655431 1122356788888753
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.81 E-value=3e-08 Score=107.09 Aligned_cols=124 Identities=12% Similarity=0.061 Sum_probs=97.8
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCe
Q 006360 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPT 84 (648)
Q Consensus 5 dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V 84 (648)
|+++|+++ .++.|++||+.+......... +...+.++.+.+. + ++++..||.|.+||+..+.. .. +...|
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~-~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~-~~----~~~~V 165 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELSEFRTVTS-FEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKST-KQ----LAQNV 165 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTTCEEEEEE-CSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCE-EE----EEESE
T ss_pred CCCEEEEE-cCCcEEEEEchhhhccCccce-eecceeeEEecCC--C-EEEEECCCCEEEEEccCCcc-cc----ccCCc
Confidence 78899988 889999999987665554544 4455777777654 2 78889999999999987763 22 44579
Q ss_pred EEEEEccCCCEEEEEeCCCeEEEEeCCCCce--eeEe----------eCCCCeEEEEEeCCCCEEEEE
Q 006360 85 AGISFSSDDKIIASVGLDKKLYTYDPGSRRP--SSCI----------TYEAPFSSLAFIDDDWILTAG 140 (648)
Q Consensus 85 ~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~--v~~~----------~h~~~I~slafsPdG~~Lasg 140 (648)
.|++|+|+| ++.|..||.|++|+...+++ ...+ .|...|.++.|.+++.++++-
T Consensus 166 s~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 166 TSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred eEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 999999999 67899999999999988775 4455 257789999999998888763
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.79 E-value=2.4e-07 Score=97.35 Aligned_cols=182 Identities=8% Similarity=0.050 Sum_probs=120.8
Q ss_pred CccCCCCEEEEEEC-----CCcEEEEECCCCceeEEEeCC-----CCCcEEEEEEccCCCeEEEEEe---CCCeEEEEEC
Q 006360 1 MYNCKDEHLASISL-----SGDLILHNLASGAKAAELKDP-----NEQVLRVLDYSRNSRHLLVTAG---DDGTLHLWDT 67 (648)
Q Consensus 1 AFSpdG~~Lasgs~-----DG~V~IwDl~sg~~i~~l~~~-----~~~~V~~Vafspdg~~lLaSgs---~Dg~V~IWDl 67 (648)
+|+++|+++++-.. ++.|.+||+.+++.+..+... +...+..+++.+++..++++-. .++.|.+||.
T Consensus 73 ~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~ 152 (343)
T 2qe8_A 73 KSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDL 152 (343)
T ss_dssp EECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEET
T ss_pred EEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEEC
Confidence 36777775554433 578999999889877766532 1234578999987664566655 6789999999
Q ss_pred CCCCceeEEeccCC-----------------------------CCeEEEEEccCCCEEEEEeCCC-eEEEEeCC---CCc
Q 006360 68 TGRSPKVSWLKQHS-----------------------------APTAGISFSSDDKIIASVGLDK-KLYTYDPG---SRR 114 (648)
Q Consensus 68 ~t~~~~v~~l~~H~-----------------------------~~V~slafsPdg~~LaSgs~Dg-~I~IWDl~---tgk 114 (648)
.+++. ...+..|. ..++.|+|+|+++.|+.+..++ .|+.+|.. .+.
T Consensus 153 ~~g~~-~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~ 231 (343)
T 2qe8_A 153 QTGLA-ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQ 231 (343)
T ss_dssp TTCCE-EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTT
T ss_pred CCCCE-EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCC
Confidence 86653 33333221 2368899999999888887766 56555532 111
Q ss_pred --------eeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006360 115 --------PSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 115 --------~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~ 185 (648)
.+...++......++++++|+++++...++.|.+||..++. +..+....+...+.+++|.+++.++++.
T Consensus 232 ~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~--~~~~~~~~~~~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 232 LTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA--YKLLVTDEKLSWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp CCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE--EEEEEECGGGSCEEEEEECTTSCEEEEE
T ss_pred CChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC--EEEEEECCceecCCeeEECCCCcEEEEe
Confidence 11223344567789999999999988889999999984432 2223222234568899998876554443
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.78 E-value=8.5e-07 Score=92.49 Aligned_cols=171 Identities=13% Similarity=0.065 Sum_probs=112.1
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeC---CCCCcEEEEEEccCCCeEEEEEeC------CCeEEEEECCCCCc
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD---PNEQVLRVLDYSRNSRHLLVTAGD------DGTLHLWDTTGRSP 72 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~---~~~~~V~~Vafspdg~~lLaSgs~------Dg~V~IWDl~t~~~ 72 (648)
|+++|+++++. .+ .|++||..+++....... .....+++++++++|+ ++++... .+.|+.+| ++.
T Consensus 97 ~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~- 170 (326)
T 2ghs_A 97 KISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGK- 170 (326)
T ss_dssp EEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTE-
T ss_pred EeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCc-
Confidence 67888776654 44 499999987775433221 1124578899999998 5554332 24566666 333
Q ss_pred eeEEeccCCCCeEEEEEccCCCEEEEE-eCCCeEEEEeCC--CC-cee--eEe---e-CCCCeEEEEEeCCCCEEEEEEc
Q 006360 73 KVSWLKQHSAPTAGISFSSDDKIIASV-GLDKKLYTYDPG--SR-RPS--SCI---T-YEAPFSSLAFIDDDWILTAGTS 142 (648)
Q Consensus 73 ~v~~l~~H~~~V~slafsPdg~~LaSg-s~Dg~I~IWDl~--tg-k~v--~~~---~-h~~~I~slafsPdG~~Lasgs~ 142 (648)
+..+..+....+.++|+|+++.|+.+ ..++.|++||+. ++ +.. ..+ . ....+..++++++|+++++...
T Consensus 171 -~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~ 249 (326)
T 2ghs_A 171 -VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG 249 (326)
T ss_dssp -EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET
T ss_pred -EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC
Confidence 33333344467899999999876555 457899999986 55 321 112 1 2345788999999987777767
Q ss_pred CCeEEEEECCCCCCceEEEeecCCCCCeeEEEEc-cCCCeEE
Q 006360 143 NGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQ-RAKPVFI 183 (648)
Q Consensus 143 DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafs-pdg~~La 183 (648)
++.|.+||.. + ..+..+. .+...+++++|. ++++.|+
T Consensus 250 ~~~v~~~d~~-g-~~~~~i~--~~~~~~~~~af~g~d~~~L~ 287 (326)
T 2ghs_A 250 EGAVDRYDTD-G-NHIARYE--VPGKQTTCPAFIGPDASRLL 287 (326)
T ss_dssp TTEEEEECTT-C-CEEEEEE--CSCSBEEEEEEESTTSCEEE
T ss_pred CCEEEEECCC-C-CEEEEEE--CCCCCcEEEEEecCCCCEEE
Confidence 7889999984 3 3334444 345679999998 7765543
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.74 E-value=2e-09 Score=114.99 Aligned_cols=189 Identities=11% Similarity=0.031 Sum_probs=98.3
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCC-C
Q 006360 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSA-P 83 (648)
Q Consensus 5 dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~-~ 83 (648)
++..|++++.||.|+.||..+|+.+..+.. ..+.+..+..++. ++++++.|+.|+.||..+++... .+..+.. .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w-~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLT-KLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC-----C-CEEECTTTCCEEEC-----CCSE-ECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceee-eeeccCccc
Confidence 578899999999999999999999988875 2233334455665 67777899999999998776432 2222211 1
Q ss_pred eE-EEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEe
Q 006360 84 TA-GISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLR 162 (648)
Q Consensus 84 V~-slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~ 162 (648)
+. ...+. ++..|++++.|+.|+.||..+|+.+..+.... ...++|++..|++++.|+.|+.||.++++.... +.
T Consensus 83 ~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~-~~ 157 (369)
T 2hz6_A 83 VQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWN-AT 157 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCE-EE
T ss_pred cccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCEEEe-Ee
Confidence 10 01111 35567888889999999999999876664333 234567888999999999999999998754322 22
Q ss_pred ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCccc
Q 006360 163 ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (648)
Q Consensus 163 ~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss 216 (648)
... ....++..+. ..++. ++.++.|+.|+.||...-.....
T Consensus 158 ~~~----~~~~~~~~~~--------~~~~~-v~~~~~dg~v~a~d~~tG~~~W~ 198 (369)
T 2hz6_A 158 YFD----YAASLPEDDV--------DYKMS-HFVSNGDGLVVTVDSESGDVLWI 198 (369)
T ss_dssp EEE----ECCBCCCCCT--------TCCCC-EEEEETSCEEEEECTTTCCEEEE
T ss_pred ccc----ccCccccCCc--------cccce-EEEECCCCEEEEEECCCCcEEEE
Confidence 101 1111111110 00123 34456688999999876554433
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.69 E-value=8e-07 Score=95.73 Aligned_cols=146 Identities=6% Similarity=-0.035 Sum_probs=109.7
Q ss_pred ccCCCCEEEEEEC-----CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEe---------CCCeEEEEEC
Q 006360 2 YNCKDEHLASISL-----SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWDT 67 (648)
Q Consensus 2 FSpdG~~Lasgs~-----DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs---------~Dg~V~IWDl 67 (648)
..|+++.+++... ++.|.++|..+++.+..+..... . . ++++||++.++++.. .++.|.+||.
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~-P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL-P-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS-C-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC-C-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 4689998888765 57999999999999998885333 2 4 899999996555542 4678999999
Q ss_pred CCCCceeEEec-cC------CCCeEEEEEccCCCEEEEEeC--CCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEE
Q 006360 68 TGRSPKVSWLK-QH------SAPTAGISFSSDDKIIASVGL--DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (648)
Q Consensus 68 ~t~~~~v~~l~-~H------~~~V~slafsPdg~~LaSgs~--Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~La 138 (648)
.+.+. +..+. +. ......++|+|||++++++.. ++.|.++|+.+++.+..+...+ + ...+......++
T Consensus 117 ~t~~v-~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g-~-~~~~P~g~~~~~ 193 (386)
T 3sjl_D 117 VTLLP-TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD-C-YHIFPTAPDTFF 193 (386)
T ss_dssp TTCCE-EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-E-EEEEEEETTEEE
T ss_pred CCCeE-EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC-c-ceeecCCCceeE
Confidence 98874 33332 11 124677999999999998864 6899999999999988886443 1 223333456777
Q ss_pred EEEcCCeEEEEECCC
Q 006360 139 AGTSNGRVVFYDIRG 153 (648)
Q Consensus 139 sgs~DG~V~IWDl~s 153 (648)
+.+.||.+.++++..
T Consensus 194 ~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEETTSCEEEEECCS
T ss_pred EECCCCCEEEEECCC
Confidence 888899999999976
No 217
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.68 E-value=2.5e-06 Score=87.33 Aligned_cols=192 Identities=13% Similarity=0.125 Sum_probs=127.0
Q ss_pred CccCCCCEEEEEEC--CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 006360 1 MYNCKDEHLASISL--SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (648)
Q Consensus 1 AFSpdG~~Lasgs~--DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~ 78 (648)
+|++|+.++++.+. ++.|+++|+.+++.+..+.-........+++. ++.++++.-.++.|.+||..+.+. +..+.
T Consensus 27 ~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v-~~~i~ 103 (266)
T 2iwa_A 27 VYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN-IKNFT 103 (266)
T ss_dssp EECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE-EEEEE
T ss_pred EEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE-EEEEE
Confidence 36787654454443 57999999999999988764333333345554 554666767789999999988764 34443
Q ss_pred cCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCC------CCeEEEEEeCCCCEEEEEEcCCeEEEEECC
Q 006360 79 QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYE------APFSSLAFIDDDWILTAGTSNGRVVFYDIR 152 (648)
Q Consensus 79 ~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~------~~I~slafsPdG~~Lasgs~DG~V~IWDl~ 152 (648)
-.... ...+++|++.++.+..++.|.++|..+.+.+..+... ..+..+.|. +|...+....++.|.+.|..
T Consensus 104 ~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~ 180 (266)
T 2iwa_A 104 HQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAK 180 (266)
T ss_dssp CCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETT
T ss_pred CCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECC
Confidence 22111 2335557877777778899999999998887776421 246788888 67544444457899999999
Q ss_pred CCCCceEEEeecC-----------CCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 153 GKPQPLTVLRACS-----------SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 153 s~~~~~~~l~~~~-----------h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
++ +.+..+...+ .......|+|+++++. +++++.....|.+.++..
T Consensus 181 tg-~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~-----------lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 181 DG-TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKR-----------IFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TC-CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTE-----------EEEEETTCSEEEEEEEEE
T ss_pred CC-cEEEEEECCCcccccccccccccCceEEEEEcCCCCE-----------EEEECCCCCeEEEEEEec
Confidence 88 4455555321 1135689999997544 445555566666666654
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.66 E-value=1.1e-06 Score=101.46 Aligned_cols=195 Identities=14% Similarity=0.151 Sum_probs=124.5
Q ss_pred CccCCCCEEEEEECCC-------------cEEEEECCCCce--eEEEeCC--CCCcEEEEEEccCCCeEEEEEeCC---C
Q 006360 1 MYNCKDEHLASISLSG-------------DLILHNLASGAK--AAELKDP--NEQVLRVLDYSRNSRHLLVTAGDD---G 60 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG-------------~V~IwDl~sg~~--i~~l~~~--~~~~V~~Vafspdg~~lLaSgs~D---g 60 (648)
+|+ ||+.|+.+..+. .|++|++.++.. ...+... +...+..+.|+||++.++++...+ .
T Consensus 181 ~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 259 (693)
T 3iuj_A 181 SWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGN 259 (693)
T ss_dssp EEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCC
T ss_pred EEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCc
Confidence 488 999999888774 399999877653 2223321 123456789999999766666533 5
Q ss_pred eEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeC-C---CeEEEEeCCCCce---eeEeeCCCCeEEEEEeCC
Q 006360 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGL-D---KKLYTYDPGSRRP---SSCITYEAPFSSLAFIDD 133 (648)
Q Consensus 61 ~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~-D---g~I~IWDl~tgk~---v~~~~h~~~I~slafsPd 133 (648)
.|++||+.++......+..+...+... |++++..|+..++ + +.|..||+.++.. ...+.+...+. .|+++
T Consensus 260 ~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~ 336 (693)
T 3iuj_A 260 RLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSG 336 (693)
T ss_dssp EEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEE
T ss_pred EEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEE
Confidence 899999977643345666676666665 6666665555443 3 5899999988765 34455555554 88999
Q ss_pred CCEEEEEEc-CC--eEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 134 DWILTAGTS-NG--RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 134 G~~Lasgs~-DG--~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
+++|+.... ++ .|++||+.+. ....+.. ...+.+..+.+++++..++.... +...-..|..||+..
T Consensus 337 g~~lv~~~~~~g~~~l~~~d~~g~--~~~~l~~-p~~~~~~~~~~~~d~~~l~~~~s--------s~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 337 SGYLFAEYMVDATARVEQFDYEGK--RVREVAL-PGLGSVSGFNGKHDDPALYFGFE--------NYAQPPTLYRFEPKS 405 (693)
T ss_dssp TTEEEEEEEETTEEEEEEECTTSC--EEEEECC-SSSSEEEECCCCTTCSCEEEEEE--------CSSSCCEEEEECTTT
T ss_pred CCEEEEEEEECCeeEEEEEECCCC--eeEEeec-CCCceEEeeecCCCCCEEEEEec--------CCCCCCEEEEEECCC
Confidence 988877665 44 6899998854 2233332 23455667777776655443311 001236777777643
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.62 E-value=5e-07 Score=92.91 Aligned_cols=173 Identities=10% Similarity=0.126 Sum_probs=111.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEe---CCCCCcEEEEEEccCCCeEEEE----EeC-------------CC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELK---DPNEQVLRVLDYSRNSRHLLVT----AGD-------------DG 60 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~---~~~~~~V~~Vafspdg~~lLaS----gs~-------------Dg 60 (648)
+|+++|+++++...++.|.+|+.. ++...... +.....++.+++.++|+ ++++ |.. .+
T Consensus 92 ~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~ 169 (305)
T 3dr2_A 92 AVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHH 169 (305)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCE
T ss_pred eECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCC
Confidence 367889876655556789999975 55332211 11123356789999998 6665 321 25
Q ss_pred eEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCC------CeEEEEeCCCCcee--eEe--eCCCCeEEEEE
Q 006360 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD------KKLYTYDPGSRRPS--SCI--TYEAPFSSLAF 130 (648)
Q Consensus 61 ~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~D------g~I~IWDl~tgk~v--~~~--~h~~~I~slaf 130 (648)
.|+.||..+++.. .+. +....+.++|+||++.|+.+... +.|++||+..+... ..+ ...+....+++
T Consensus 170 ~v~~~d~~~g~~~--~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~ 246 (305)
T 3dr2_A 170 SVYRLPPDGSPLQ--RMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCV 246 (305)
T ss_dssp EEEEECSSSCCCE--EEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEE
T ss_pred eEEEEcCCCCcEE--EEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEE
Confidence 6788887666532 222 44567899999999988877665 68999998765411 111 12345667899
Q ss_pred eCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006360 131 IDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 131 sPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~ 185 (648)
+++|++. +++.+| |++||.... .+..+.. + ..+.+++|.++++.|..+
T Consensus 247 d~~G~lw-v~~~~g-v~~~~~~g~--~~~~~~~--~-~~~~~~~f~~d~~~L~it 294 (305)
T 3dr2_A 247 DRGGWLW-SSSGTG-VCVFDSDGQ--LLGHIPT--P-GTASNCTFDQAQQRLFIT 294 (305)
T ss_dssp CTTSCEE-ECCSSE-EEEECTTSC--EEEEEEC--S-SCCCEEEECTTSCEEEEE
T ss_pred CCCCCEE-EecCCc-EEEECCCCC--EEEEEEC--C-CceeEEEEeCCCCEEEEE
Confidence 9999944 444554 999998543 3344442 2 258899999876655443
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.62 E-value=8.1e-07 Score=97.00 Aligned_cols=112 Identities=5% Similarity=-0.031 Sum_probs=82.5
Q ss_pred CCCCEEEEEECC-----CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEe---------CCCeEEEEECCC
Q 006360 4 CKDEHLASISLS-----GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWDTTG 69 (648)
Q Consensus 4 pdG~~Lasgs~D-----G~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs---------~Dg~V~IWDl~t 69 (648)
++++++++.... +.|.++|..+++.+..+.... .. .++++||++.++++.. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~-~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF-LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS-SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC-CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 466766665542 699999999999999988533 23 6899999996555542 467899999998
Q ss_pred CCceeEEec-c------CCCCeEEEEEccCCCEEEEEeC--CCeEEEEeCCCCceeeEe
Q 006360 70 RSPKVSWLK-Q------HSAPTAGISFSSDDKIIASVGL--DKKLYTYDPGSRRPSSCI 119 (648)
Q Consensus 70 ~~~~v~~l~-~------H~~~V~slafsPdg~~LaSgs~--Dg~I~IWDl~tgk~v~~~ 119 (648)
.+. +..+. + .......+.|+||+++++++.. ++.|.++|+.+++.+..+
T Consensus 159 ~~v-v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I 216 (426)
T 3c75_H 159 FLP-IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRML 216 (426)
T ss_dssp CCE-EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred CcE-EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEE
Confidence 874 33332 2 1234567899999999999874 578999999988765444
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.59 E-value=2.7e-06 Score=91.00 Aligned_cols=149 Identities=12% Similarity=0.079 Sum_probs=99.1
Q ss_pred CccCCCCEEEEEEC--CCcEEEEECCCCceeEE-EeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC----------
Q 006360 1 MYNCKDEHLASISL--SGDLILHNLASGAKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT---------- 67 (648)
Q Consensus 1 AFSpdG~~Lasgs~--DG~V~IwDl~sg~~i~~-l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl---------- 67 (648)
+|+|||++|+++.. ++.|.++| .+++.+.. +... . |+.+.++++..+++.+.||.+.+||.
T Consensus 131 ~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~--~---~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~ 204 (373)
T 2mad_H 131 ANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP--T---CYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLV 204 (373)
T ss_pred EECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC--c---eEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEec
Confidence 48999999998874 47899999 99998877 5431 1 12233333333344444444444444
Q ss_pred -------------------------------------CCCCce-eEEecc----------CCCCeEEEEEccCCCEEEEE
Q 006360 68 -------------------------------------TGRSPK-VSWLKQ----------HSAPTAGISFSSDDKIIASV 99 (648)
Q Consensus 68 -------------------------------------~t~~~~-v~~l~~----------H~~~V~slafsPdg~~LaSg 99 (648)
.+.... +..+.- .......+.++|+++.++.+
T Consensus 205 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~ 284 (373)
T 2mad_H 205 GAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLL 284 (373)
T ss_pred cccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEE
Confidence 222100 000000 01123337788888888776
Q ss_pred eC----------CCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCC-EEEEEE-cCCeEEEEECCCCC
Q 006360 100 GL----------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDW-ILTAGT-SNGRVVFYDIRGKP 155 (648)
Q Consensus 100 s~----------Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~-~Lasgs-~DG~V~IWDl~s~~ 155 (648)
.. ++.|.++|+.+++.+..+.......+++|+|||+ +++++. .++.|.+||+.+.+
T Consensus 285 ~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 285 TSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred eccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 53 3579999999999998887777899999999999 777777 48999999999874
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.59 E-value=4.7e-07 Score=95.05 Aligned_cols=193 Identities=7% Similarity=0.029 Sum_probs=117.7
Q ss_pred CccCCCCEEEEEE--CCCcEEEEECCCCceeEEEeC------CCCCcEEEEEEccCCCeEEEEEeC-----CCeEEEEEC
Q 006360 1 MYNCKDEHLASIS--LSGDLILHNLASGAKAAELKD------PNEQVLRVLDYSRNSRHLLVTAGD-----DGTLHLWDT 67 (648)
Q Consensus 1 AFSpdG~~Lasgs--~DG~V~IwDl~sg~~i~~l~~------~~~~~V~~Vafspdg~~lLaSgs~-----Dg~V~IWDl 67 (648)
+++++|+.+++.. .++.+.||.+.+++. ..+.. .+...+..|+|.++++ ++++-.. ++.|.+||+
T Consensus 23 a~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~~i~~~d~ 100 (343)
T 2qe8_A 23 TLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVPKLVAWDT 100 (343)
T ss_dssp EECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCCEEEEEET
T ss_pred EECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCCeEEEEEC
Confidence 4678999888763 234345555545543 22221 1345688999999986 5554332 578999999
Q ss_pred CCCCceeEEecc------CCCCeEEEEEccCCCEE-EEEe---CCCeEEEEeCCCCceeeEeeC----------------
Q 006360 68 TGRSPKVSWLKQ------HSAPTAGISFSSDDKII-ASVG---LDKKLYTYDPGSRRPSSCITY---------------- 121 (648)
Q Consensus 68 ~t~~~~v~~l~~------H~~~V~slafsPdg~~L-aSgs---~Dg~I~IWDl~tgk~v~~~~h---------------- 121 (648)
.+++. +..+.. +...+..+++++++..+ ++-. .++.|.+||+.+++....+..
T Consensus 101 ~tg~~-~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~ 179 (343)
T 2qe8_A 101 LNNQL-SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGV 179 (343)
T ss_dssp TTTEE-EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTE
T ss_pred CCCeE-EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCE
Confidence 87763 233321 22456899999865454 4444 578999999988776554421
Q ss_pred --------------CCCeEEEEEeCCCCEEEEEEcCC-eEEEEECCC---CC----CceEEEeecCCCCCeeEEEEccCC
Q 006360 122 --------------EAPFSSLAFIDDDWILTAGTSNG-RVVFYDIRG---KP----QPLTVLRACSSSEAVSSLCWQRAK 179 (648)
Q Consensus 122 --------------~~~I~slafsPdG~~Lasgs~DG-~V~IWDl~s---~~----~~~~~l~~~~h~~~VtsLafspdg 179 (648)
...+..++|+|||++|+++..++ .|+.++... .. .....+...++.+....++++++|
T Consensus 180 ~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G 259 (343)
T 2qe8_A 180 PVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDH 259 (343)
T ss_dssp ECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTC
T ss_pred EEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCC
Confidence 02357899999999998887766 566555421 10 000000111233455678887755
Q ss_pred CeEEEeccCCCCeEEEEeeCCCeEEcCCC
Q 006360 180 PVFIDETTCKAETALLGGAVGDSILMPDP 208 (648)
Q Consensus 180 ~~Las~~~~~~~~~lvs~s~D~~IkvWDl 208 (648)
++ +++...++.|.+||.
T Consensus 260 ~l------------~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 260 NI------------YVGDLAHSAIGVITS 276 (343)
T ss_dssp CE------------EEEEGGGTEEEEEET
T ss_pred CE------------EEEccCCCeEEEEEC
Confidence 44 444455778888887
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.54 E-value=3.8e-06 Score=91.69 Aligned_cols=192 Identities=8% Similarity=0.009 Sum_probs=126.9
Q ss_pred CCCCEEEE-EECCCcEEEEECCCC----ceeEEEe------CCCCCcEEEEEEccCCCeEEEEEeCC------CeEEEEE
Q 006360 4 CKDEHLAS-ISLSGDLILHNLASG----AKAAELK------DPNEQVLRVLDYSRNSRHLLVTAGDD------GTLHLWD 66 (648)
Q Consensus 4 pdG~~Las-gs~DG~V~IwDl~sg----~~i~~l~------~~~~~~V~~Vafspdg~~lLaSgs~D------g~V~IWD 66 (648)
.++++|+. +..++.|+|+|+.+. +.+..+. ......-+.+...|++ +++++..+ +.|.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEE
Confidence 77887755 566789999998755 4555552 0011134557788998 56665554 7899999
Q ss_pred CCCCCceeEEec-c-CC-CCeEEEEEccCCCEEEEEe-------------------CCCeEEEEeCCCCceeeEeeCC--
Q 006360 67 TTGRSPKVSWLK-Q-HS-APTAGISFSSDDKIIASVG-------------------LDKKLYTYDPGSRRPSSCITYE-- 122 (648)
Q Consensus 67 l~t~~~~v~~l~-~-H~-~~V~slafsPdg~~LaSgs-------------------~Dg~I~IWDl~tgk~v~~~~h~-- 122 (648)
..+.+. +..+. + +. ..-+.+.|+|+++.+++.. .+.+|.+||+.+++.+..+...
T Consensus 171 ~~T~~v-~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 171 HYSFEP-LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp TTTCCE-EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred CCCCeE-EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 998885 34443 2 22 2245688999999888874 3679999999998888777653
Q ss_pred -CCeEEEEE--eCCCCEEEEEEc------CCeEEEEECCCCCC-ceEEEeecCC----------------CCCeeEEEEc
Q 006360 123 -APFSSLAF--IDDDWILTAGTS------NGRVVFYDIRGKPQ-PLTVLRACSS----------------SEAVSSLCWQ 176 (648)
Q Consensus 123 -~~I~slaf--sPdG~~Lasgs~------DG~V~IWDl~s~~~-~~~~l~~~~h----------------~~~VtsLafs 176 (648)
.....+.| +|++++++++++ +++|.+|....+.- ..+++..... ......|.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 23445555 999999988875 56787776654210 1111111110 2457789999
Q ss_pred cCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 177 RAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 177 pdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
+||++|.+. +-..+.|.+||+.
T Consensus 330 ~DGrfLYVS-----------nrg~d~VavfdV~ 351 (462)
T 2ece_A 330 LDDKFLYLS-----------LWGIGEVRQYDIS 351 (462)
T ss_dssp TTSCEEEEE-----------ETTTTEEEEEECS
T ss_pred CCCCEEEEE-----------eCCCCEEEEEEec
Confidence 987776444 4457889999885
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.49 E-value=3.2e-06 Score=97.86 Aligned_cols=178 Identities=14% Similarity=0.157 Sum_probs=118.7
Q ss_pred ccCCCCEEEEEECCCc-------------------EEEEECCCCceeEEEeCCCC--------CcEEEEEEccCCC--eE
Q 006360 2 YNCKDEHLASISLSGD-------------------LILHNLASGAKAAELKDPNE--------QVLRVLDYSRNSR--HL 52 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~-------------------V~IwDl~sg~~i~~l~~~~~--------~~V~~Vafspdg~--~l 52 (648)
|++++.+|+.+..++. |+.||..+|+.+..++..+. ..+.......+++ .+
T Consensus 242 ~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~ 321 (689)
T 1yiq_A 242 YDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKV 321 (689)
T ss_dssp EETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEE
T ss_pred EcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEE
Confidence 5677888888877653 99999999999988875321 1111122223442 36
Q ss_pred EEEEeCCCeEEEEECCCCCceeEEeccCCC--------------------------------------CeEEEEEccCCC
Q 006360 53 LVTAGDDGTLHLWDTTGRSPKVSWLKQHSA--------------------------------------PTAGISFSSDDK 94 (648)
Q Consensus 53 LaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~--------------------------------------~V~slafsPdg~ 94 (648)
++.++.+|.++++|..+++.....-..+.. .-..++|+|+..
T Consensus 322 v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~ 401 (689)
T 1yiq_A 322 LMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTG 401 (689)
T ss_dssp EEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCC
Confidence 888899999999999988753211111000 011268889888
Q ss_pred EEEEEeC---------------------------------------------CCeEEEEeCCCCceeeEeeCCCCeEEEE
Q 006360 95 IIASVGL---------------------------------------------DKKLYTYDPGSRRPSSCITYEAPFSSLA 129 (648)
Q Consensus 95 ~LaSgs~---------------------------------------------Dg~I~IWDl~tgk~v~~~~h~~~I~sla 129 (648)
++++... +|.|+.||+.+++.+-.+.+..++....
T Consensus 402 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~ 481 (689)
T 1yiq_A 402 LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGT 481 (689)
T ss_dssp EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCE
T ss_pred EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCcc
Confidence 8777532 3779999999999887776655555556
Q ss_pred EeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCe
Q 006360 130 FIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPV 181 (648)
Q Consensus 130 fsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~ 181 (648)
+...+.+|++|+.||.|+.||.++++.. ..+.. .+.....-+.|..+|+.
T Consensus 482 ~~tagglvf~gt~dg~l~a~D~~tG~~l-w~~~~-~~~~~~~p~ty~~~G~q 531 (689)
T 1yiq_A 482 LSTAGNLVFEGSADGRVIAYAADTGEKL-WEQPA-ASGVMAAPVTYSVDGEQ 531 (689)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEE-EEEEC-SSCCCSCCEEEEETTEE
T ss_pred ceECCCEEEEECCCCcEEEEECCCCccc-eeeeC-CCCcccCceEEEECCEE
Confidence 6778889999999999999999998543 33332 22222334666666653
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.48 E-value=1e-06 Score=94.43 Aligned_cols=173 Identities=13% Similarity=0.049 Sum_probs=113.0
Q ss_pred CccCCCCEEEEEE----------CCCcEEEEECCCCceeEEEeCCC------CCcEEEEEEccCCCeEEEEEeC-CCeEE
Q 006360 1 MYNCKDEHLASIS----------LSGDLILHNLASGAKAAELKDPN------EQVLRVLDYSRNSRHLLVTAGD-DGTLH 63 (648)
Q Consensus 1 AFSpdG~~Lasgs----------~DG~V~IwDl~sg~~i~~l~~~~------~~~V~~Vafspdg~~lLaSgs~-Dg~V~ 63 (648)
+|+|||++++++. .++.|.+||+.+++.+.++..+. ......+.|+||+++++++... +..|.
T Consensus 71 ~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~ 150 (368)
T 1mda_H 71 VAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAG 150 (368)
T ss_dssp EECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEE
T ss_pred EECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEE
Confidence 4899999888876 36789999999999999986420 1123458899999954444323 46677
Q ss_pred E--EECCC------CCc--------------------eeEEecc------------------------------------
Q 006360 64 L--WDTTG------RSP--------------------KVSWLKQ------------------------------------ 79 (648)
Q Consensus 64 I--WDl~t------~~~--------------------~v~~l~~------------------------------------ 79 (648)
+ +|..+ ..+ ....+..
T Consensus 151 V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~ 230 (368)
T 1mda_H 151 LSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA 230 (368)
T ss_dssp EEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS
T ss_pred EEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC
Confidence 7 77632 000 0000000
Q ss_pred ----------CC---------------------CCeEEEEEccCCCEEEEEeC---------CCeEEEEeCCCCceeeEe
Q 006360 80 ----------HS---------------------APTAGISFSSDDKIIASVGL---------DKKLYTYDPGSRRPSSCI 119 (648)
Q Consensus 80 ----------H~---------------------~~V~slafsPdg~~LaSgs~---------Dg~I~IWDl~tgk~v~~~ 119 (648)
.. .....++|+||+++++.+.. ++.+.++|+.+.+.+..+
T Consensus 231 ~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i 310 (368)
T 1mda_H 231 SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPI 310 (368)
T ss_dssp SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECC
T ss_pred CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEE
Confidence 00 00011678999888887543 235669999999988888
Q ss_pred eCCCCeEEEEEeCCCCE-EEEEE-cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEcc
Q 006360 120 TYEAPFSSLAFIDDDWI-LTAGT-SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR 177 (648)
Q Consensus 120 ~h~~~I~slafsPdG~~-Lasgs-~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafsp 177 (648)
.......+++|+|||++ +++.. .++.|.++|+.+. +.+..+. -......+++++
T Consensus 311 ~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~-kvv~~I~---vg~~P~~i~~~~ 366 (368)
T 1mda_H 311 SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD-QDQSSVE---LDKGPESLSVQN 366 (368)
T ss_dssp EEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSC-EEEEECC---CCSCCCEEECCC
T ss_pred ECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCC-cEEEEEE---CCCCCCEEEeec
Confidence 66667899999999985 55555 4899999999987 2333332 334455666543
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.48 E-value=4.3e-06 Score=96.54 Aligned_cols=178 Identities=12% Similarity=0.189 Sum_probs=122.0
Q ss_pred ccCCCCEEEEEECCC-------------------cEEEEECCCCceeEEEeCCCC--------CcEEEEEEccCCC--eE
Q 006360 2 YNCKDEHLASISLSG-------------------DLILHNLASGAKAAELKDPNE--------QVLRVLDYSRNSR--HL 52 (648)
Q Consensus 2 FSpdG~~Lasgs~DG-------------------~V~IwDl~sg~~i~~l~~~~~--------~~V~~Vafspdg~--~l 52 (648)
|++++.+|+.+..++ .|..+|..+|+.+..++..+. .....+....+|+ .+
T Consensus 250 ~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~ 329 (677)
T 1kb0_A 250 FDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKV 329 (677)
T ss_dssp EETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEE
T ss_pred EcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeE
Confidence 567788888776653 499999999999988775321 1112234444663 47
Q ss_pred EEEEeCCCeEEEEECCCCCceeEEeccCC----------CCe------------------------EEEEEccCCCEEEE
Q 006360 53 LVTAGDDGTLHLWDTTGRSPKVSWLKQHS----------APT------------------------AGISFSSDDKIIAS 98 (648)
Q Consensus 53 LaSgs~Dg~V~IWDl~t~~~~v~~l~~H~----------~~V------------------------~slafsPdg~~LaS 98 (648)
++.++.+|.|+++|..+++.....-.... ..+ ..++|+|+..++++
T Consensus 330 l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv 409 (677)
T 1kb0_A 330 ILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYL 409 (677)
T ss_dssp EEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEE
T ss_pred EEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEE
Confidence 88999999999999998875322111100 001 14688998888877
Q ss_pred EeCC-------------------------------------------CeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCC
Q 006360 99 VGLD-------------------------------------------KKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDW 135 (648)
Q Consensus 99 gs~D-------------------------------------------g~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~ 135 (648)
...+ +.|..||+.+++.+-.+.+..++....+..++.
T Consensus 410 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~ 489 (677)
T 1kb0_A 410 PAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGN 489 (677)
T ss_dssp EEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTT
T ss_pred eChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCC
Confidence 6432 789999999999888777666666666777888
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCe
Q 006360 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPV 181 (648)
Q Consensus 136 ~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~ 181 (648)
++++++.||.|++||.++++. +..+.. .+.....-+.|..+|+.
T Consensus 490 ~v~~g~~dg~l~a~D~~tG~~-lw~~~~-~~~~~~~p~~y~~~G~~ 533 (677)
T 1kb0_A 490 VVFQGTADGRLVAYHAATGEK-LWEAPT-GTGVVAAPSTYMVDGRQ 533 (677)
T ss_dssp EEEEECTTSEEEEEETTTCCE-EEEEEC-SSCCCSCCEEEEETTEE
T ss_pred EEEEECCCCcEEEEECCCCce-eeeeeC-CCCcccCCEEEEeCCEE
Confidence 999999999999999999853 333332 23333344556666653
No 227
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.47 E-value=6.1e-06 Score=83.99 Aligned_cols=172 Identities=14% Similarity=0.213 Sum_probs=115.1
Q ss_pred ccCCCCEEEEEECCC--cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006360 2 YNCKDEHLASISLSG--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (648)
Q Consensus 2 FSpdG~~Lasgs~DG--~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~ 79 (648)
|+ ++.++.+.+.+| .|+++|+.+++.+..+.......--.+++ +++.+++..-.++.+.+||..+.+. +..+.-
T Consensus 50 ~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~-~~ti~~ 125 (262)
T 3nol_A 50 YR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQ-VRSFNY 125 (262)
T ss_dssp EE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCE-EEEEEC
T ss_pred EE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcE-EEEEEC
Confidence 45 566666777766 89999999999999887533322223444 3554666666789999999998875 344432
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeC---C---CCeEEEEEeCCCCEEEEEEcCCeEEEEECCC
Q 006360 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---E---APFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (648)
Q Consensus 80 H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h---~---~~I~slafsPdG~~Lasgs~DG~V~IWDl~s 153 (648)
.. .=+.++ +|++.|+....++.|.++|..+.+.+..+.. . ..++.+.|. +|.+.+..-.++.|.+.|..+
T Consensus 126 ~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 126 DG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp SS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTT
T ss_pred CC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCC
Confidence 22 113344 5677777776688999999999988877642 2 334567776 675554444678899999998
Q ss_pred CCCceEEEeecC----------CCCCeeEEEEccCCCeE
Q 006360 154 KPQPLTVLRACS----------SSEAVSSLCWQRAKPVF 182 (648)
Q Consensus 154 ~~~~~~~l~~~~----------h~~~VtsLafspdg~~L 182 (648)
+ +....+...+ .......|+|+|+++.|
T Consensus 202 G-~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~l 239 (262)
T 3nol_A 202 G-KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRL 239 (262)
T ss_dssp C-BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEE
T ss_pred C-cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEE
Confidence 8 4555555421 12356889999975544
No 228
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.47 E-value=6e-06 Score=88.88 Aligned_cols=197 Identities=11% Similarity=0.052 Sum_probs=128.1
Q ss_pred CccCCCCEEEEEEC--CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC-CCceeEEe
Q 006360 1 MYNCKDEHLASISL--SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG-RSPKVSWL 77 (648)
Q Consensus 1 AFSpdG~~Lasgs~--DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t-~~~~v~~l 77 (648)
+|+|||++|+++.. ++.|.++|+.+++.+.++... . + .-+.|.+...+++.+.||.+.+.++.. ++. ....
T Consensus 143 a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~--g-~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v-~~~~ 216 (386)
T 3sjl_D 143 SLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP--D-C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP-EITH 216 (386)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--S-E--EEEEEEETTEEEEEETTSCEEEEECCSSSCC-EEEE
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC--C-c--ceeecCCCceeEEECCCCCEEEEECCCCCeE-EEee
Confidence 47999999888864 689999999999999988742 2 1 122354444677888899999999865 442 2211
Q ss_pred ccC----CCCeE-EEEEc-cCCCEEEEEeCCCeEEEEeCCCCce--eeEee-----------CCCCeEEEEEeCCCCEEE
Q 006360 78 KQH----SAPTA-GISFS-SDDKIIASVGLDKKLYTYDPGSRRP--SSCIT-----------YEAPFSSLAFIDDDWILT 138 (648)
Q Consensus 78 ~~H----~~~V~-slafs-Pdg~~LaSgs~Dg~I~IWDl~tgk~--v~~~~-----------h~~~I~slafsPdG~~La 138 (648)
..+ ...+. ...|. ++|++++ .+.+|.|++.|+.++.. +..+. ....+..++++++++.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~ly 295 (386)
T 3sjl_D 217 TEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIY 295 (386)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEE
T ss_pred cceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEE
Confidence 111 12222 24664 4775544 66689999999976642 22221 123344578899999888
Q ss_pred EEEc----------CCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCC-eEEEeccCCCCeEEEEeeCCCeEEcCC
Q 006360 139 AGTS----------NGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKP-VFIDETTCKAETALLGGAVGDSILMPD 207 (648)
Q Consensus 139 sgs~----------DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~-~Las~~~~~~~~~lvs~s~D~~IkvWD 207 (648)
+... .+.|.++|+.+.+ .+..+.. ...+.+|+|++|++ +|+ ++...++.|.++|
T Consensus 296 V~~~~~~~~~hk~~~~~V~viD~~t~k-v~~~i~v---g~~~~~lavs~D~~~~ly-----------~tn~~~~~VsViD 360 (386)
T 3sjl_D 296 LLVDQRDEWRHKTASRFVVVLDAKTGE-RLAKFEM---GHEIDSINVSQDEKPLLY-----------ALSTGDKTLYIHD 360 (386)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCC-EEEEEEE---EEEECEEEECSSSSCEEE-----------EEETTTTEEEEEE
T ss_pred EEeccccccccCCCCCEEEEEECCCCe-EEEEEEC---CCCcceEEECCCCCeEEE-----------EEcCCCCeEEEEE
Confidence 8653 2469999999984 3444432 24688999999764 332 3334478888888
Q ss_pred CCCCCCcccccc
Q 006360 208 PLPSVTTSSVSL 219 (648)
Q Consensus 208 lr~~~~~ss~ss 219 (648)
........++..
T Consensus 361 ~~t~k~~~~i~~ 372 (386)
T 3sjl_D 361 AESGEELRSVNQ 372 (386)
T ss_dssp TTTCCEEEEECC
T ss_pred CCCCcEEEEecC
Confidence 876665554433
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.44 E-value=8.6e-06 Score=88.96 Aligned_cols=181 Identities=12% Similarity=0.050 Sum_probs=120.5
Q ss_pred ccCCCCEEEEEECC------CcEEEEECCCCceeEEEeCC--CCCcEEEEEEccCCCeEEEEEe----------------
Q 006360 2 YNCKDEHLASISLS------GDLILHNLASGAKAAELKDP--NEQVLRVLDYSRNSRHLLVTAG---------------- 57 (648)
Q Consensus 2 FSpdG~~Lasgs~D------G~V~IwDl~sg~~i~~l~~~--~~~~V~~Vafspdg~~lLaSgs---------------- 57 (648)
..|+| .++++..+ |.|.++|.++++.+..+... ....-..+.|+|+++ .+++..
T Consensus 145 ~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~ 222 (462)
T 2ece_A 145 CGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHL 222 (462)
T ss_dssp ECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTH
T ss_pred ECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhh
Confidence 45888 66666555 78999999999999888732 112234578899998 666653
Q ss_pred ---CCCeEEEEECCCCCceeEEeccC--CCCeEEEEE--ccCCCEEEEEeC------CCeEEEEeCCCCce--eeEe--e
Q 006360 58 ---DDGTLHLWDTTGRSPKVSWLKQH--SAPTAGISF--SSDDKIIASVGL------DKKLYTYDPGSRRP--SSCI--T 120 (648)
Q Consensus 58 ---~Dg~V~IWDl~t~~~~v~~l~~H--~~~V~slaf--sPdg~~LaSgs~------Dg~I~IWDl~tgk~--v~~~--~ 120 (648)
.+..|.+||+.+++. +..+.-. ......+.| +|+++++++++. +++|.+|....++. .+.+ .
T Consensus 223 ~~~~~d~V~v~D~~~~k~-~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~ 301 (462)
T 2ece_A 223 KDRYGNRIHFWDLRKRKR-IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIP 301 (462)
T ss_dssp HHHSCCEEEEEETTTTEE-EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred hhccCCEEEEEECCCCcE-eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCC
Confidence 378999999988653 4444332 123456666 999999888774 55777665544431 1111 0
Q ss_pred C-----------------CCCeEEEEEeCCCCEEEEEEc-CCeEEEEECCCCCC--ceEEEeecCC------------CC
Q 006360 121 Y-----------------EAPFSSLAFIDDDWILTAGTS-NGRVVFYDIRGKPQ--PLTVLRACSS------------SE 168 (648)
Q Consensus 121 h-----------------~~~I~slafsPdG~~Lasgs~-DG~V~IWDl~s~~~--~~~~l~~~~h------------~~ 168 (648)
. ......+.+++||++|+++.. .+.|.+||+..... .+..+...+. .+
T Consensus 302 ~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~g 381 (462)
T 2ece_A 302 AEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTG 381 (462)
T ss_dssp CEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCS
T ss_pred CccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCC
Confidence 0 245788999999999998886 67899999964322 2233322111 01
Q ss_pred CeeEEEEccCCCeEEEe
Q 006360 169 AVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 169 ~VtsLafspdg~~Las~ 185 (648)
.-..+.++|||++|++.
T Consensus 382 gPr~~~lSpDGk~LyVa 398 (462)
T 2ece_A 382 APQMLEISRDGRRVYVT 398 (462)
T ss_dssp CCCCEEECTTSSEEEEE
T ss_pred CCCEEEEcCCCCEEEEE
Confidence 35789999999988776
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.42 E-value=5.7e-06 Score=93.16 Aligned_cols=193 Identities=10% Similarity=-0.050 Sum_probs=133.6
Q ss_pred CCCCEEEEEEC-CCcEEEEECCCCceeEEEeCCCCCcEEEEEE-c-cCCCeEEEEE-----------------eCCCeEE
Q 006360 4 CKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDY-S-RNSRHLLVTA-----------------GDDGTLH 63 (648)
Q Consensus 4 pdG~~Lasgs~-DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vaf-s-pdg~~lLaSg-----------------s~Dg~V~ 63 (648)
+||++|+.... ++.|.+.|+.+.++...+.-......+.+++ . |+++++++++ -.++.|.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 47888877665 4569999999999888665445566788888 5 8998554443 2356799
Q ss_pred EEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCC--------------------------------------eE
Q 006360 64 LWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDK--------------------------------------KL 105 (648)
Q Consensus 64 IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg--------------------------------------~I 105 (648)
++|..+.+...+...+. ....++++|+|+++++.+.+. .|
T Consensus 179 vID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 99998876433322222 346688999999999888553 47
Q ss_pred EEEeCCC--Cce-eeEeeCCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECCCCCCc--------eEEEeecCCCCCeeEE
Q 006360 106 YTYDPGS--RRP-SSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQP--------LTVLRACSSSEAVSSL 173 (648)
Q Consensus 106 ~IWDl~t--gk~-v~~~~h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~s~~~~--------~~~l~~~~h~~~VtsL 173 (648)
.+.|.++ ++. +..+.......++.++|||+++++.+ .+..|.+||+.+.+.. ..+.....-......+
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~ 336 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHT 336 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEE
T ss_pred EEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceE
Confidence 7788877 544 55665556778899999999888766 5788999999854210 0122222334567889
Q ss_pred EEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 174 CWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 174 afspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
+|+++| + .+++.-.|+.|.+||+..
T Consensus 337 aF~~dG-~-----------aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 337 AFDGRG-N-----------AYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EECTTS-E-----------EEEEETTTTEEEEEEHHH
T ss_pred EECCCC-e-----------EEEEEecCCcEEEEEhhH
Confidence 999976 3 334445588888898754
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.40 E-value=0.00017 Score=72.16 Aligned_cols=191 Identities=10% Similarity=0.003 Sum_probs=117.1
Q ss_pred CccCCCCEEEEEE-CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006360 1 MYNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (648)
Q Consensus 1 AFSpdG~~Lasgs-~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~ 79 (648)
+|+++++.|+.+. .++.|.++++...... .+..........+++.+++.+++++-...+.|.++|.++.... .....
T Consensus 42 ~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~-~~~~~ 119 (267)
T 1npe_A 42 AFDCVDKVVYWTDISEPSIGRASLHGGEPT-TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-VLFDT 119 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEESSSCCCE-EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECS
T ss_pred EEecCCCEEEEEECCCCEEEEEecCCCCcE-EEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE-EEEEC
Confidence 3667666665554 4678999998654433 3322222456789999987757777677889999999765432 22222
Q ss_pred CCCCeEEEEEccCCCEEEEEeC---CCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECCCC
Q 006360 80 HSAPTAGISFSSDDKIIASVGL---DKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGK 154 (648)
Q Consensus 80 H~~~V~slafsPdg~~LaSgs~---Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~s~ 154 (648)
.......++++|++..|+.+.. .+.|..+++......... ........+++++++..|+.+. ..+.|.++|+.+.
T Consensus 120 ~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 120 GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 2356789999996666655554 368888887643322222 2234678999999877776655 4678999999764
Q ss_pred CCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 155 PQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 155 ~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
. ....+. .......+++. ++.++++....+.|.++|...
T Consensus 200 ~-~~~~~~---~~~~P~gi~~d-------------~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 200 G-RRKVLE---GLQYPFAVTSY-------------GKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp E-EEEEEE---CCCSEEEEEEE-------------TTEEEEEETTTTEEEEEETTT
T ss_pred c-eEEEec---CCCCceEEEEe-------------CCEEEEEECCCCeEEEEeCCC
Confidence 2 122222 12223445442 234444444556777766643
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.37 E-value=9.8e-05 Score=73.96 Aligned_cols=187 Identities=12% Similarity=0.040 Sum_probs=117.6
Q ss_pred CCEEEEEECCCcEEEEECCCCcee-----EEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 6 DEHLASISLSGDLILHNLASGAKA-----AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 6 G~~Lasgs~DG~V~IwDl~sg~~i-----~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
|.+|+.+.. +.|+.+++...... ..+.. .......++|++++++++++-..++.|.++|..+... ...+...
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~-~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~ 77 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHI-PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTIIRQD 77 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEE-EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEECTT
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecC-CCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEEEECC
Confidence 445666654 57999998644321 11211 1234678999998776777777788999999987653 2233333
Q ss_pred CCCeEEEEEccCCCEEE-EEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEEc---CCeEEEEECCCCC
Q 006360 81 SAPTAGISFSSDDKIIA-SVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTS---NGRVVFYDIRGKP 155 (648)
Q Consensus 81 ~~~V~slafsPdg~~La-Sgs~Dg~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs~---DG~V~IWDl~s~~ 155 (648)
.....++++++++..|+ +-...+.|.++|+.......... .......++++|++..|+.+.. .+.|..+++....
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~ 157 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN 157 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC
Confidence 35689999999655554 44556799999987543333332 2256789999997666666654 3689999987642
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 156 ~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
. ..+.. ........++|++++..| +++....+.|.++|+.
T Consensus 158 ~--~~~~~-~~~~~P~gia~d~~~~~l-----------yv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 158 R--RILAQ-DNLGLPNGLTFDAFSSQL-----------CWVDAGTHRAECLNPA 197 (267)
T ss_dssp C--EEEEC-TTCSCEEEEEEETTTTEE-----------EEEETTTTEEEEEETT
T ss_pred c--EEEEE-CCCCCCcEEEEcCCCCEE-----------EEEECCCCEEEEEecC
Confidence 2 22221 223467889999875544 3333445666666654
No 233
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.34 E-value=1.7e-05 Score=86.50 Aligned_cols=153 Identities=12% Similarity=0.073 Sum_probs=99.2
Q ss_pred CccCCCCEEEEEEC--CCcEEEEECCCCceeEEEeCCCCCcE------EEEEEccCCCeE--------------------
Q 006360 1 MYNCKDEHLASISL--SGDLILHNLASGAKAAELKDPNEQVL------RVLDYSRNSRHL-------------------- 52 (648)
Q Consensus 1 AFSpdG~~Lasgs~--DG~V~IwDl~sg~~i~~l~~~~~~~V------~~Vafspdg~~l-------------------- 52 (648)
+|+|||++|+++.. ++.|.++|+.+++.+..+.......+ ..+.++++++.+
T Consensus 183 ~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~ 262 (426)
T 3c75_H 183 ALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTE 262 (426)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCT
T ss_pred EEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccC
Confidence 47999999998874 57899999999998887764211000 012233333311
Q ss_pred ----------------EEEEeCCCeEEEEECCCCCceeEEecc-------------CCCCeEEEEEccCCCEEEEEeC--
Q 006360 53 ----------------LVTAGDDGTLHLWDTTGRSPKVSWLKQ-------------HSAPTAGISFSSDDKIIASVGL-- 101 (648)
Q Consensus 53 ----------------LaSgs~Dg~V~IWDl~t~~~~v~~l~~-------------H~~~V~slafsPdg~~LaSgs~-- 101 (648)
++.....+.|.+.|..+... ..+.. .......++++|+++++++...
T Consensus 263 ~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~--~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~ 340 (426)
T 3c75_H 263 DELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGA--TFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQR 340 (426)
T ss_dssp TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCE--EECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEEC
T ss_pred CCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCce--EEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccc
Confidence 11112334444444433221 00000 0011223688998887777642
Q ss_pred --------CCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCC-EEEEEE-cCCeEEEEECCCCC
Q 006360 102 --------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDW-ILTAGT-SNGRVVFYDIRGKP 155 (648)
Q Consensus 102 --------Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~-~Lasgs-~DG~V~IWDl~s~~ 155 (648)
++.|.++|+.+.+.+..+........+.|+|||+ ++++.. .++.|.|+|+.+.+
T Consensus 341 ~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 341 DEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp CTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred ccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 3579999999999998887666789999999999 888888 58999999999983
No 234
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.33 E-value=8.8e-06 Score=87.16 Aligned_cols=91 Identities=4% Similarity=-0.035 Sum_probs=68.5
Q ss_pred cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEe---------CCCeEEEEECCCCCceeEEeccC-------
Q 006360 17 DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWDTTGRSPKVSWLKQH------- 80 (648)
Q Consensus 17 ~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs---------~Dg~V~IWDl~t~~~~v~~l~~H------- 80 (648)
+|.++|..+++.+.++..... . .+.|+||++.++++.. .++.|.+||..+.+. +..+.-+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v-v~~I~v~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP-IADIELPDAPRFSV 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE-EEEEEETTSCSCCB
T ss_pred eEEEEECCCCeEEEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE-EEEEECCCcccccc
Confidence 888999999999999886443 3 5899999995555542 478999999999885 4444322
Q ss_pred CCCeEEEEEccCCCEEEEEeC--CCeEEE--EeCC
Q 006360 81 SAPTAGISFSSDDKIIASVGL--DKKLYT--YDPG 111 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~--Dg~I~I--WDl~ 111 (648)
......++|+|||++++++.. +..|.+ +|+.
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchh
Confidence 134678999999999998874 356777 7773
No 235
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.31 E-value=4e-05 Score=78.09 Aligned_cols=168 Identities=11% Similarity=0.046 Sum_probs=114.4
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeE
Q 006360 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTA 85 (648)
Q Consensus 6 G~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~ 85 (648)
+.++++.+.+|.|+++|+++++.+..+ -.....-..+++ +++.+++..-.++.+.+||..+.+. +..+.-- ..-+
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~-~~ti~~~-~eGw 139 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQR-ERTTRYS-GEGW 139 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEE-EEEEECS-SCCC
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcE-EEEEeCC-Ccee
Confidence 455667788889999999999998887 323222233444 4555677777889999999998874 3444322 2224
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeC------CCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceE
Q 006360 86 GISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY------EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (648)
Q Consensus 86 slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h------~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~ 159 (648)
.++ +|++.|+.+..++.|.++|..+.+.+..+.. -..++.+.|. +|.+.+..-.++.|.+.|..++ +.+.
T Consensus 140 GLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG-~V~~ 215 (268)
T 3nok_A 140 GLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATG-TVVG 215 (268)
T ss_dssp CEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTC-BEEE
T ss_pred EEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCC-cEEE
Confidence 455 4678888887899999999999988877642 1245677877 6754444445788999999988 4445
Q ss_pred EEeec-----------CCCCCeeEEEEccCCCeE
Q 006360 160 VLRAC-----------SSSEAVSSLCWQRAKPVF 182 (648)
Q Consensus 160 ~l~~~-----------~h~~~VtsLafspdg~~L 182 (648)
.+... ........|+|+|+++.|
T Consensus 216 ~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rl 249 (268)
T 3nok_A 216 VIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRI 249 (268)
T ss_dssp EEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCE
T ss_pred EEECCCCcccccccccCcCCceEEEEEcCCCCEE
Confidence 55432 122467889999975443
No 236
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.28 E-value=0.00013 Score=75.26 Aligned_cols=179 Identities=9% Similarity=0.071 Sum_probs=113.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCC-------------------CCcEEEEEEcc-CCCeEEEEEeCCC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPN-------------------EQVLRVLDYSR-NSRHLLVTAGDDG 60 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~-------------------~~~V~~Vafsp-dg~~lLaSgs~Dg 60 (648)
+|+++|++++++..++.|..||...++.. .+.... ......+++.+ +++ |+.+...+
T Consensus 25 ~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~--l~v~d~~~ 101 (322)
T 2fp8_A 25 TFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ--LYIVDCYY 101 (322)
T ss_dssp ECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE--EEEEETTT
T ss_pred EEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc--EEEEECCC
Confidence 46788887777888899999998655432 232100 12467789997 554 45555556
Q ss_pred eEEEEECCCCCceeEE--ecc-CCCCeEEEEEcc-CCCEEEEEeC-----------------CCeEEEEeCCCCceeeEe
Q 006360 61 TLHLWDTTGRSPKVSW--LKQ-HSAPTAGISFSS-DDKIIASVGL-----------------DKKLYTYDPGSRRPSSCI 119 (648)
Q Consensus 61 ~V~IWDl~t~~~~v~~--l~~-H~~~V~slafsP-dg~~LaSgs~-----------------Dg~I~IWDl~tgk~v~~~ 119 (648)
.|..+|..++...... ..+ .....+.+++.+ +|+++++-.. ++.|..||..+++.....
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 181 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL 181 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec
Confidence 6888887755321111 111 123578899999 9987776532 367999998877654443
Q ss_pred eCCCCeEEEEEeCCCCEEEEE-EcCCeEEEEECCCCCC-ceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006360 120 TYEAPFSSLAFIDDDWILTAG-TSNGRVVFYDIRGKPQ-PLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 120 ~h~~~I~slafsPdG~~Lasg-s~DG~V~IWDl~s~~~-~~~~l~~~~h~~~VtsLafspdg~~Las~ 185 (648)
........++|+++|++|+++ ..++.|++|++..... ....+.. ..+ ...++++++|++.++.
T Consensus 182 ~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 182 KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEEEEE
T ss_pred cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEEEEe
Confidence 333456789999999877666 4568899999985321 1222221 123 7788888887655554
No 237
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.27 E-value=9.7e-05 Score=74.38 Aligned_cols=169 Identities=11% Similarity=0.119 Sum_probs=111.9
Q ss_pred CCEEEEEECCC--cEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCC
Q 006360 6 DEHLASISLSG--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAP 83 (648)
Q Consensus 6 G~~Lasgs~DG--~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~ 83 (648)
+.++.+.+.+| .|+++|+.+++.+..+.......--.+++. ++.++...-.++.+.+||..+.+. +..+.-.. .
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~-~~ti~~~~-~ 106 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTP-RARFRYPG-E 106 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEE-EEEEECSS-C
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcE-EEEEeCCC-C
Confidence 44555556654 899999999999998875333222334443 454666667889999999998874 34443222 2
Q ss_pred eEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCC------CCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCc
Q 006360 84 TAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYE------APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (648)
Q Consensus 84 V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~------~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~ 157 (648)
=+.++ +++..|+....++.|.++|..+.+.+..+... ..++.+.|. +|...+..-.+..|.+.|..++ +.
T Consensus 107 Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG-~V 182 (243)
T 3mbr_X 107 GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASG-KV 182 (243)
T ss_dssp CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTC-BE
T ss_pred ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCC-CE
Confidence 24555 45776777777889999999999887776421 345667776 5655544445778999999988 44
Q ss_pred eEEEeecC-----------CCCCeeEEEEccCCCeE
Q 006360 158 LTVLRACS-----------SSEAVSSLCWQRAKPVF 182 (648)
Q Consensus 158 ~~~l~~~~-----------h~~~VtsLafspdg~~L 182 (648)
+..+...+ .......|+|+|+++.|
T Consensus 183 ~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~l 218 (243)
T 3mbr_X 183 VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRL 218 (243)
T ss_dssp EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEE
T ss_pred EEEEECCcCccccccccCCcCCceEEEEEcCCCCEE
Confidence 45554321 12356889999965443
No 238
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.24 E-value=1.5e-07 Score=100.45 Aligned_cols=145 Identities=14% Similarity=0.071 Sum_probs=77.5
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEE-EEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 006360 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLR-VLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (648)
Q Consensus 3 SpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~-~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~ 81 (648)
..++..+++++.||.|+.||..+|+.+..+..+....+. ...+. ++. .+++++.|+.|+.||..+++.. ..+..+.
T Consensus 46 ~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~-w~~~~~~ 122 (369)
T 2hz6_A 46 HVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQ-QTLSSAF 122 (369)
T ss_dssp ----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC-------------
T ss_pred EcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCC-EEEEEeCCCEEEEEECCCCcEE-EEecCCC
Confidence 346667777789999999999999887766532111111 01111 233 5778888999999999988742 3333332
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCC---CEEEEEEcCCeEEEEECCCCC
Q 006360 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDD---WILTAGTSNGRVVFYDIRGKP 155 (648)
Q Consensus 82 ~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG---~~Lasgs~DG~V~IWDl~s~~ 155 (648)
.+.++|++..|++++.|+.|+.||.++|+.+..+.... ....++..+. ..+++++.||.|+.||.++++
T Consensus 123 ----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 123 ----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp --------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred ----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 23456788899999999999999999998765443111 1222333332 567788999999999999874
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.20 E-value=5e-06 Score=93.65 Aligned_cols=183 Identities=11% Similarity=0.012 Sum_probs=117.8
Q ss_pred CCCCEEEEEE------------------CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCC------
Q 006360 4 CKDEHLASIS------------------LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD------ 59 (648)
Q Consensus 4 pdG~~Lasgs------------------~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~D------ 59 (648)
|+++++++++ .++.|.++|..+++.+.++.-.. ....++++++++..++++..+
T Consensus 145 p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i 222 (595)
T 1fwx_A 145 PRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTL 222 (595)
T ss_dssp SBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSH
T ss_pred CCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcch
Confidence 8899988874 24579999999999888877311 234478899999555554332
Q ss_pred -------------------------------CeEEEEECCC--CCceeEEeccCCCCeEEEEEccCCCEEEEEe-CCCeE
Q 006360 60 -------------------------------GTLHLWDTTG--RSPKVSWLKQHSAPTAGISFSSDDKIIASVG-LDKKL 105 (648)
Q Consensus 60 -------------------------------g~V~IWDl~t--~~~~v~~l~~H~~~V~slafsPdg~~LaSgs-~Dg~I 105 (648)
+.|.|.|..+ +...+..+.. .....++.++|||+++++++ .+.+|
T Consensus 223 ~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~V 301 (595)
T 1fwx_A 223 PEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTV 301 (595)
T ss_dssp HHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBE
T ss_pred hhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeE
Confidence 1355666655 3221222222 22467899999999877765 56799
Q ss_pred EEEeCCCCc------------eeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCC---------CCceEEEeec
Q 006360 106 YTYDPGSRR------------PSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK---------PQPLTVLRAC 164 (648)
Q Consensus 106 ~IWDl~tgk------------~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~---------~~~~~~l~~~ 164 (648)
.++|+.+.+ .+..+........++|+++|...++.-.|+.|.+||+... .+.+..+..+
T Consensus 302 sVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~ 381 (595)
T 1fwx_A 302 TVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH 381 (595)
T ss_dssp EEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS
T ss_pred EEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc
Confidence 999998653 3344455667889999999943344556999999999761 2334444422
Q ss_pred ---CCCCCeeEEEEccCCCeEEEeccCC
Q 006360 165 ---SSSEAVSSLCWQRAKPVFIDETTCK 189 (648)
Q Consensus 165 ---~h~~~VtsLafspdg~~Las~~~~~ 189 (648)
+|...-.++.+++||++|++.....
T Consensus 382 yqpGh~~~~~g~t~~~DGk~l~~~Nk~s 409 (595)
T 1fwx_A 382 YQPGHLKTVMGETLDATNDWLVCLSKFS 409 (595)
T ss_dssp SCEEEEEETTTTSTTCCSSEEEEEESCC
T ss_pred cccccceeccceEeCCCCCEEEEcCCCC
Confidence 1111112335678999988764433
No 240
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.12 E-value=6.4e-05 Score=86.73 Aligned_cols=197 Identities=9% Similarity=0.099 Sum_probs=123.8
Q ss_pred CCEEEEEEC------CCcEEEEECCCCceeEEEeCCCCC-------------------------------cEEEEEEccC
Q 006360 6 DEHLASISL------SGDLILHNLASGAKAAELKDPNEQ-------------------------------VLRVLDYSRN 48 (648)
Q Consensus 6 G~~Lasgs~------DG~V~IwDl~sg~~i~~l~~~~~~-------------------------------~V~~Vafspd 48 (648)
+..|++++. +|.|+.||..+|+.+..+...... ....+++.++
T Consensus 174 ~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~ 253 (677)
T 1kb0_A 174 KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAE 253 (677)
T ss_dssp TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETT
T ss_pred CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCC
Confidence 345555543 689999999999999887642211 1124678888
Q ss_pred CCeEEEEEeCCC-------------------eEEEEECCCCCceeEEecc-CC-------CCeEEEEEccCC---CEEEE
Q 006360 49 SRHLLVTAGDDG-------------------TLHLWDTTGRSPKVSWLKQ-HS-------APTAGISFSSDD---KIIAS 98 (648)
Q Consensus 49 g~~lLaSgs~Dg-------------------~V~IWDl~t~~~~v~~l~~-H~-------~~V~slafsPdg---~~LaS 98 (648)
+. +++.+..++ .|..+|..+++.+.+.-.. |. .....+....+| ..|+.
T Consensus 254 ~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~ 332 (677)
T 1kb0_A 254 LN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILH 332 (677)
T ss_dssp TT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEE
T ss_pred CC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEE
Confidence 77 666665553 5999999998854332222 21 122233333467 68999
Q ss_pred EeCCCeEEEEeCCCCceeeEeeCC--C---------C-e------------------------EEEEEeCCCCEEEEEEc
Q 006360 99 VGLDKKLYTYDPGSRRPSSCITYE--A---------P-F------------------------SSLAFIDDDWILTAGTS 142 (648)
Q Consensus 99 gs~Dg~I~IWDl~tgk~v~~~~h~--~---------~-I------------------------~slafsPdG~~Lasgs~ 142 (648)
++.+|.|+++|..+|+.+..+... . . + ..++|+|++.++++...
T Consensus 333 ~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~ 412 (677)
T 1kb0_A 333 APKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQ 412 (677)
T ss_dssp CCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEE
T ss_pred ECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeCh
Confidence 999999999999999987554311 0 0 0 14688999888887654
Q ss_pred C-------------------------------------------CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCC
Q 006360 143 N-------------------------------------------GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAK 179 (648)
Q Consensus 143 D-------------------------------------------G~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg 179 (648)
+ |.|+.||+.+++... .+. +..++.+..+..+
T Consensus 413 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W-~~~---~~~~~~~g~~~~~- 487 (677)
T 1kb0_A 413 NVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW-SVE---HVSPWNGGTLTTA- 487 (677)
T ss_dssp ECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE-EEE---ESSSCCCCEEEET-
T ss_pred hcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEe-ecC---CCCCCcCcceEeC-
Confidence 2 678999998874322 222 2222222222222
Q ss_pred CeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcccccc
Q 006360 180 PVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSVSL 219 (648)
Q Consensus 180 ~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss~ss 219 (648)
++ +++.++.|+.+++||...-....+...
T Consensus 488 ----------g~-~v~~g~~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 488 ----------GN-VVFQGTADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp ----------TT-EEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ----------CC-EEEEECCCCcEEEEECCCCceeeeeeC
Confidence 23 344457799999999987776655443
No 241
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.06 E-value=0.00013 Score=84.39 Aligned_cols=102 Identities=12% Similarity=0.106 Sum_probs=69.4
Q ss_pred CCcEEEEECCCCceeEEEeCCCC------------------------------CcEEEEEEccCCCeEEEEEeCCC----
Q 006360 15 SGDLILHNLASGAKAAELKDPNE------------------------------QVLRVLDYSRNSRHLLVTAGDDG---- 60 (648)
Q Consensus 15 DG~V~IwDl~sg~~i~~l~~~~~------------------------------~~V~~Vafspdg~~lLaSgs~Dg---- 60 (648)
+|.|+.||..+|+.+..+..... .....+++.++.. +++.+..++
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWD 260 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCC-EEEEeCCCCCccc
Confidence 68999999999999887763110 1112467888777 677777665
Q ss_pred ---------------eEEEEECCCCCceeEEecc-CC-------CCeEEEEEccCCC---EEEEEeCCCeEEEEeCCCCc
Q 006360 61 ---------------TLHLWDTTGRSPKVSWLKQ-HS-------APTAGISFSSDDK---IIASVGLDKKLYTYDPGSRR 114 (648)
Q Consensus 61 ---------------~V~IWDl~t~~~~v~~l~~-H~-------~~V~slafsPdg~---~LaSgs~Dg~I~IWDl~tgk 114 (648)
.|..||.++++.+-+.-.. |. ..+.......+++ .|+.++.+|.|+++|..+|+
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 3999999998854332222 22 1222222223565 78899999999999999999
Q ss_pred eee
Q 006360 115 PSS 117 (648)
Q Consensus 115 ~v~ 117 (648)
.+.
T Consensus 341 ~l~ 343 (689)
T 1yiq_A 341 LLS 343 (689)
T ss_dssp EEE
T ss_pred Eec
Confidence 874
No 242
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.05 E-value=0.00018 Score=83.95 Aligned_cols=148 Identities=8% Similarity=-0.001 Sum_probs=92.0
Q ss_pred Ccc-CCCCEEEEEEC-CC----cEEEEECCCC-ceeEE-EeCCCCCcEEEEEEccCCCeEEEEEeCC----CeEEEEECC
Q 006360 1 MYN-CKDEHLASISL-SG----DLILHNLASG-AKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDD----GTLHLWDTT 68 (648)
Q Consensus 1 AFS-pdG~~Lasgs~-DG----~V~IwDl~sg-~~i~~-l~~~~~~~V~~Vafspdg~~lLaSgs~D----g~V~IWDl~ 68 (648)
+|| |||++||.+.. +| .|+++|+.++ +.+.. +. .....++|+||++.++++...+ ..|++|++.
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~----~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lg 255 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS----GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMG 255 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE----EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETT
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc----CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECC
Confidence 379 99998886543 33 4999999888 63211 11 1123578999998666665432 368888987
Q ss_pred CCCce-eEEec-cCCCCeEEEEEccCCCEEEEEeCC---CeEEEEeCCCCc--e--eeEee-CCCCeEEEEEeCCCCEEE
Q 006360 69 GRSPK-VSWLK-QHSAPTAGISFSSDDKIIASVGLD---KKLYTYDPGSRR--P--SSCIT-YEAPFSSLAFIDDDWILT 138 (648)
Q Consensus 69 t~~~~-v~~l~-~H~~~V~slafsPdg~~LaSgs~D---g~I~IWDl~tgk--~--v~~~~-h~~~I~slafsPdG~~La 138 (648)
+.... ...+. .+......+.|+||+++|+....+ ..|+++|+.++. . ..+.. .......+.|+. |..|+
T Consensus 256 t~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~ 334 (751)
T 2xe4_A 256 KLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLV 334 (751)
T ss_dssp SCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTEEE
T ss_pred CCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCEEE
Confidence 76422 22222 333456788999999998876633 378999998762 3 22322 334555566554 55555
Q ss_pred EEE-cC----CeEEEEECCC
Q 006360 139 AGT-SN----GRVVFYDIRG 153 (648)
Q Consensus 139 sgs-~D----G~V~IWDl~s 153 (648)
..+ .+ ..|+++|+.+
T Consensus 335 ~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 335 ILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEECTTTCTTCEEEEEETTS
T ss_pred EEeCCCCCCCcEEEEEcCCC
Confidence 444 33 3677788764
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.05 E-value=0.00025 Score=73.16 Aligned_cols=188 Identities=14% Similarity=0.133 Sum_probs=110.9
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeC----CCCCcEEEEEEcc-CCCeEEEEEeC-----------------C
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD----PNEQVLRVLDYSR-NSRHLLVTAGD-----------------D 59 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~----~~~~~V~~Vafsp-dg~~lLaSgs~-----------------D 59 (648)
+.+++..|+++...+.|.++|..++. +..+.. ........+++.+ +++ ++++-.. +
T Consensus 87 ~~~~~g~l~v~d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~ 164 (322)
T 2fp8_A 87 YNLQNNQLYIVDCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKT 164 (322)
T ss_dssp EETTTTEEEEEETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCC
T ss_pred EcCCCCcEEEEECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCC
Confidence 44423345555555568888875443 222221 1123467899999 887 5554322 3
Q ss_pred CeEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEE-eCCCeEEEEeCCCCc--eeeEe-eCCCCeEEEEEeCCCC
Q 006360 60 GTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASV-GLDKKLYTYDPGSRR--PSSCI-TYEAPFSSLAFIDDDW 135 (648)
Q Consensus 60 g~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSg-s~Dg~I~IWDl~tgk--~v~~~-~h~~~I~slafsPdG~ 135 (648)
+.|+.||..++.. ..+.......+.|+|++++++|+.+ ...+.|+.||+.... ....+ ...+ ...++++++|+
T Consensus 165 g~v~~~d~~~~~~--~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~ 241 (322)
T 2fp8_A 165 GRLIKYDPSTKET--TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGH 241 (322)
T ss_dssp EEEEEEETTTTEE--EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSC
T ss_pred ceEEEEeCCCCEE--EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCC
Confidence 6788899876652 2222222346789999999866655 556899999987532 11122 2233 78899999998
Q ss_pred EEEEEEc----------CCeEEEEECCCCCCceEEEeecC-C-CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeE
Q 006360 136 ILTAGTS----------NGRVVFYDIRGKPQPLTVLRACS-S-SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSI 203 (648)
Q Consensus 136 ~Lasgs~----------DG~V~IWDl~s~~~~~~~l~~~~-h-~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~I 203 (648)
++++... .+.|.+||... +.+..+.... . -..++++++. ++.++++....+.|
T Consensus 242 l~va~~~~~~~~~~~~~~~~v~~~d~~G--~~~~~~~~~~g~~~~~~~~~~~~-------------~g~L~v~~~~~~~i 306 (322)
T 2fp8_A 242 FWVSSSEELDGNMHGRVDPKGIKFDEFG--NILEVIPLPPPFAGEHFEQIQEH-------------DGLLYIGTLFHGSV 306 (322)
T ss_dssp EEEEEEEETTSSTTSCEEEEEEEECTTS--CEEEEEECCTTTTTSCCCEEEEE-------------TTEEEEECSSCSEE
T ss_pred EEEEecCcccccccCCCccEEEEECCCC--CEEEEEECCCCCccccceEEEEe-------------CCEEEEeecCCCce
Confidence 7666544 46688888753 3334443211 0 1335555542 45566666667888
Q ss_pred EcCCCC
Q 006360 204 LMPDPL 209 (648)
Q Consensus 204 kvWDlr 209 (648)
.++++.
T Consensus 307 ~~~~~~ 312 (322)
T 2fp8_A 307 GILVYD 312 (322)
T ss_dssp EEEEC-
T ss_pred EEEecc
Confidence 888764
No 244
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.03 E-value=0.0012 Score=67.53 Aligned_cols=175 Identities=9% Similarity=0.031 Sum_probs=102.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeC-C-CeEEEEECCCCCceeEEec
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-D-GTLHLWDTTGRSPKVSWLK 78 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~-D-g~V~IWDl~t~~~~v~~l~ 78 (648)
+|+++|+++++-..++.|+.||.. ++....+. .......+++.++++ ++++... + ..|..+|..+++.....-.
T Consensus 38 a~~~~g~lyv~d~~~~~I~~~d~~-g~~~~~~~--~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~~~~~ 113 (306)
T 2p4o_A 38 ASAPDGTIFVTNHEVGEIVSITPD-GNQQIHAT--VEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-CCEEEEEE--CSSEEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred EECCCCCEEEEeCCCCeEEEECCC-CceEEEEe--CCCCceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEEEEeC
Confidence 477888866666578899999975 44444443 234678899999998 5555433 2 2477777766653211111
Q ss_pred cCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCce-eeEe----------eCCCCeEEEEEeCCCCEEEEEE-cCCeE
Q 006360 79 QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP-SSCI----------TYEAPFSSLAFIDDDWILTAGT-SNGRV 146 (648)
Q Consensus 79 ~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~-v~~~----------~h~~~I~slafsPdG~~Lasgs-~DG~V 146 (648)
........++..+++..+++-..++.|+.+|...++. +... ........+ ++|+.+|+++. ..+.|
T Consensus 114 ~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I 191 (306)
T 2p4o_A 114 PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLL 191 (306)
T ss_dssp TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEE
T ss_pred CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEE
Confidence 2223345666655555555555688999999876531 1110 111234455 78887776655 56789
Q ss_pred EEEECCCCCC--ceEEEeecCCCCCeeEEEEccCCCeEEE
Q 006360 147 VFYDIRGKPQ--PLTVLRACSSSEAVSSLCWQRAKPVFID 184 (648)
Q Consensus 147 ~IWDl~s~~~--~~~~l~~~~h~~~VtsLafspdg~~Las 184 (648)
++||+..... ....+.. ......++++++|++.++
T Consensus 192 ~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 192 LRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLYGA 228 (306)
T ss_dssp EEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEEEE
T ss_pred EEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEEEE
Confidence 9999975211 1122221 134566777776655444
No 245
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.00 E-value=0.00065 Score=71.84 Aligned_cols=193 Identities=12% Similarity=0.161 Sum_probs=123.8
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccC----CCe--EEEEEe-C--CCeEEEEECCCCCceeE
Q 006360 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRN----SRH--LLVTAG-D--DGTLHLWDTTGRSPKVS 75 (648)
Q Consensus 5 dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspd----g~~--lLaSgs-~--Dg~V~IWDl~t~~~~v~ 75 (648)
...+++....++-|.+||+ +|+.+..+.. ..++.|..-+. ++. ++++.. . +++|.+|++......+.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC---CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 3456666777889999999 8999988864 34555555442 221 233333 3 58899998742221244
Q ss_pred Eecc------CC-CCeEEEEE--cc-CCC-EEEEEeCCCeEEEEeCC-------CCceeeEeeCCCCeEEEEEeCCCCEE
Q 006360 76 WLKQ------HS-APTAGISF--SS-DDK-IIASVGLDKKLYTYDPG-------SRRPSSCITYEAPFSSLAFIDDDWIL 137 (648)
Q Consensus 76 ~l~~------H~-~~V~slaf--sP-dg~-~LaSgs~Dg~I~IWDl~-------tgk~v~~~~h~~~I~slafsPdG~~L 137 (648)
.+.. .. ..++.+|+ ++ .+. ++++...+|.+..|++. +.+.++.+.....+..|...+....|
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRL 194 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeE
Confidence 4421 12 56788888 77 444 68888889999999883 23566777788899999999999999
Q ss_pred EEEEcCCeEEEEECCCCC-CceEEEeec--CC-CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 138 TAGTSNGRVVFYDIRGKP-QPLTVLRAC--SS-SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 138 asgs~DG~V~IWDl~s~~-~~~~~l~~~--~h-~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
+++-++.-|..||.+-.. .....+... ++ ...+..|++.+. ....+.+++++-.++.+.+||..
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~--------~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYA--------ADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEEC--------GGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEec--------CCCCEEEEEEcCCCCEEEEEECC
Confidence 999999777777754221 111222222 22 235777877432 01122355555567889999886
No 246
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.00 E-value=0.00043 Score=70.67 Aligned_cols=173 Identities=13% Similarity=0.047 Sum_probs=107.3
Q ss_pred ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeC--CCeEEEEECCCCCceeEEec-cCCCCeEEEEEccCCCEEEEEeCCC
Q 006360 27 AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD--DGTLHLWDTTGRSPKVSWLK-QHSAPTAGISFSSDDKIIASVGLDK 103 (648)
Q Consensus 27 ~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~--Dg~V~IWDl~t~~~~v~~l~-~H~~~V~slafsPdg~~LaSgs~Dg 103 (648)
+.+.++..........+.|++++. ++++.+. ++.|+++|+.+++.. ..+. +.......+++. .+.++++.-.++
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~v~-~~i~l~~~~fgeGi~~~-g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGKVE-NIHKMDDSYFGEGLTLL-NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCCEE-EEEECCTTCCEEEEEEE-TTEEEEEETTCS
T ss_pred eEEEEEECCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCCEE-EEEecCCCcceEEEEEe-CCEEEEEEecCC
Confidence 455666532223468899999864 5665553 689999999998853 3332 222223455665 234445555678
Q ss_pred eEEEEeCCCCceeeEeeCC-CCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCC---CCeeEEEEccCC
Q 006360 104 KLYTYDPGSRRPSSCITYE-APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSS---EAVSSLCWQRAK 179 (648)
Q Consensus 104 ~I~IWDl~tgk~v~~~~h~-~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~---~~VtsLafspdg 179 (648)
.+.++|..+.+.+..+... .. ...+++||+.++++..++.|.++|..+.+ ....+....+. ..+..+.|. +|
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~-v~~~I~Vg~~~~p~~~~nele~~-dg 162 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFK-LIKKHNVKYNGHRVIRLNELEYI-NG 162 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCc-EEEEEEECCCCcccccceeEEEE-CC
Confidence 9999999999988888654 22 34456688888887788999999998874 33333321111 135567766 43
Q ss_pred CeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCccccc
Q 006360 180 PVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSVS 218 (648)
Q Consensus 180 ~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss~s 218 (648)
.+++....++.|.+.|+........+.
T Consensus 163 ------------~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 163 ------------EVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp ------------EEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred ------------EEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 233333446677777776655544443
No 247
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.97 E-value=0.0033 Score=65.02 Aligned_cols=185 Identities=8% Similarity=-0.044 Sum_probs=116.3
Q ss_pred EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC---CceeEEeccCCCCe
Q 006360 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR---SPKVSWLKQHSAPT 84 (648)
Q Consensus 8 ~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~---~~~v~~l~~H~~~V 84 (648)
+|+.+. ...|+..|+...+....+. .......++|.+.++.++++-..++.|+.+|+.+. ......+...-...
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 444443 3579999998766555444 33456789999877767777677899999999761 21122333333456
Q ss_pred EEEEEccC-CCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEEcC--CeEEEEECCCCCCceEE
Q 006360 85 AGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTSN--GRVVFYDIRGKPQPLTV 160 (648)
Q Consensus 85 ~slafsPd-g~~LaSgs~Dg~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs~D--G~V~IWDl~s~~~~~~~ 160 (648)
..+++.+. ++++++-...+.|.++|+........+. .......++++|++..|+..... +.|..+++.... ...
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~--~~~ 157 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IYS 157 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC--EEE
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC--eEE
Confidence 88999874 4455555677899999987654443333 34577899999976666655543 689999987642 222
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
+.. ..-.....|+|++++..| +++....+.|..+|+.
T Consensus 158 ~~~-~~~~~P~gla~d~~~~~l-----------Y~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 158 LVT-ENIQWPNGITLDLLSGRL-----------YWVDSKLHSISSIDVN 194 (316)
T ss_dssp EEC-SSCSCEEEEEEETTTTEE-----------EEEETTTTEEEEEETT
T ss_pred EEE-CCCCCceEEEEeccCCEE-----------EEEECCCCeEEEEecC
Confidence 221 233567889999864443 3444445566666654
No 248
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.96 E-value=0.0014 Score=66.38 Aligned_cols=181 Identities=11% Similarity=0.152 Sum_probs=116.0
Q ss_pred CccCCCCEE-EEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc--eeEEe
Q 006360 1 MYNCKDEHL-ASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP--KVSWL 77 (648)
Q Consensus 1 AFSpdG~~L-asgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~--~v~~l 77 (648)
+|+|+++.| ++...++.|...|.. ++.+..+.-....-...|++.+++. ++++.-.++.+.++++..... .+...
T Consensus 33 a~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~l~~~~v~~~~~i~~~~~~ 110 (255)
T 3qqz_A 33 TWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-FVISDERDYAIYVISLTPNSEVKILKKI 110 (255)
T ss_dssp EEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-EEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-EEEEECCCCcEEEEEcCCCCeeeeeeee
Confidence 477877655 557778899999986 8888887532234567788888876 556656778899998865442 11211
Q ss_pred c------cCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCC---CCceeeEee--------CCCCeEEEEEeCC-CCEEEE
Q 006360 78 K------QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPG---SRRPSSCIT--------YEAPFSSLAFIDD-DWILTA 139 (648)
Q Consensus 78 ~------~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~---tgk~v~~~~--------h~~~I~slafsPd-G~~Las 139 (648)
. .+......|+|+|+++.|+++.......+|.+. ....+..+. ....+..++++|. +.+++.
T Consensus 111 ~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliL 190 (255)
T 3qqz_A 111 KIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVL 190 (255)
T ss_dssp ECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEE
T ss_pred ccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEE
Confidence 1 234456899999988777766665544444443 111222221 2345789999996 556666
Q ss_pred EEcCCeEEEEECCCCCCceEEEeecC-C------CCCeeEEEEccCCCeEEEe
Q 006360 140 GTSNGRVVFYDIRGKPQPLTVLRACS-S------SEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 140 gs~DG~V~IWDl~s~~~~~~~l~~~~-h------~~~VtsLafspdg~~Las~ 185 (648)
...+..|.++|.... ++..+.... . -..--.|+|.++|+..+++
T Consensus 191 S~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 191 SHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp ETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred ECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 667788999998764 344444321 1 1356789999988755554
No 249
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.95 E-value=0.00021 Score=72.71 Aligned_cols=137 Identities=16% Similarity=0.155 Sum_probs=95.0
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeE
Q 006360 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTA 85 (648)
Q Consensus 6 G~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~ 85 (648)
+..|..++.++.|+.||.. ++....+.. ....+.++...+++. |+.++.++.|+.||.. +.. +.........+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~-~~~~~~~~~~~~ 180 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKT-KKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTE-KWRFKTNDAITS 180 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCE-EEEEECSSCCCS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcC-CCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCE-eEEEecCCCcee
Confidence 4456778888999999987 777766654 334455566666765 6667888999999998 543 333444455677
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCC
Q 006360 86 GISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (648)
Q Consensus 86 slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s 153 (648)
++.+..++.+++ ++ +.|..|| .+++...... ....+.++...++|. |.+++.++.|..||...
T Consensus 181 ~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g 244 (330)
T 3hxj_A 181 AASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDG 244 (330)
T ss_dssp CCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTS
T ss_pred eeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCC
Confidence 777877777554 44 7799999 6776654443 345678888888775 55677788899987543
No 250
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.94 E-value=0.00064 Score=71.29 Aligned_cols=144 Identities=11% Similarity=0.053 Sum_probs=96.1
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCC--------CCcEE-EEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE
Q 006360 5 KDEHLASISLSGDLILHNLASGAKAAELKDPN--------EQVLR-VLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (648)
Q Consensus 5 dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~--------~~~V~-~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~ 75 (648)
++..|++++.++.|+.||..+|+.+..+.... ...+. .+.. ++. .++.++.++.|+.+|..+++...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~v~v~~~~g~l~a~d~~tG~~~W- 127 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGG-HVYIGSEKAQVYALNTSDGTVAW- 127 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETT-EEEEEETTSEEEEEETTTCCEEE-
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCC-EEEEEcCCCEEEEEECCCCCEEE-
Confidence 45678888889999999999999887776422 12232 2222 233 57778899999999999887432
Q ss_pred EeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCe------EEEEEeCCCCEEEEEEcCCeEEEE
Q 006360 76 WLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPF------SSLAFIDDDWILTAGTSNGRVVFY 149 (648)
Q Consensus 76 ~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I------~slafsPdG~~Lasgs~DG~V~IW 149 (648)
.............. .+..++.++.++.|..+|..+++.+........+ ...... +..++++..++.|+.+
T Consensus 128 ~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~ 203 (376)
T 3q7m_A 128 QTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAV 203 (376)
T ss_dssp EEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEE
T ss_pred EEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEE
Confidence 22222211111222 2557888899999999999999987666543332 122222 4578888889999999
Q ss_pred ECCCCCC
Q 006360 150 DIRGKPQ 156 (648)
Q Consensus 150 Dl~s~~~ 156 (648)
|..+++.
T Consensus 204 d~~tG~~ 210 (376)
T 3q7m_A 204 LMEQGQM 210 (376)
T ss_dssp ETTTCCE
T ss_pred ECCCCcE
Confidence 9988743
No 251
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.91 E-value=0.0062 Score=62.94 Aligned_cols=174 Identities=11% Similarity=-0.048 Sum_probs=104.0
Q ss_pred CccCCCCEEEEEE-CCCcEEEEECCC---CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 006360 1 MYNCKDEHLASIS-LSGDLILHNLAS---GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (648)
Q Consensus 1 AFSpdG~~Lasgs-~DG~V~IwDl~s---g~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~ 76 (648)
+|+++++.|+.+. .++.|+.+++.. +.....+..........+++.+.+++++++-..++.|.++|..+... ...
T Consensus 36 ~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~ 114 (316)
T 1ijq_A 36 DTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTL 114 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEE
T ss_pred EEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCce-EEE
Confidence 3566666565554 457888888764 12222222112233466888876665777767788999999987653 222
Q ss_pred eccCCCCeEEEEEccCCCEEEEEeC-C-CeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECC
Q 006360 77 LKQHSAPTAGISFSSDDKIIASVGL-D-KKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIR 152 (648)
Q Consensus 77 l~~H~~~V~slafsPdg~~LaSgs~-D-g~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~ 152 (648)
+.........+++.|.+..|+.+.. . +.|..+++......... ........++|++++..|+.+. ..+.|..+|+.
T Consensus 115 ~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 115 FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 3333456899999996665555543 3 68888888643332222 2345678999999877777665 45789999998
Q ss_pred CCCCceEEEeecCCCCCeeEEEEc
Q 006360 153 GKPQPLTVLRACSSSEAVSSLCWQ 176 (648)
Q Consensus 153 s~~~~~~~l~~~~h~~~VtsLafs 176 (648)
... ...+............|++.
T Consensus 195 g~~-~~~~~~~~~~~~~P~giav~ 217 (316)
T 1ijq_A 195 GGN-RKTILEDEKRLAHPFSLAVF 217 (316)
T ss_dssp SCS-CEEEEECTTTTSSEEEEEEE
T ss_pred CCc-eEEEeecCCccCCcEEEEEE
Confidence 642 22222211222345666664
No 252
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.90 E-value=0.00021 Score=82.22 Aligned_cols=153 Identities=15% Similarity=0.213 Sum_probs=104.1
Q ss_pred ccCCCCEEEEEECCC-------------------cEEEEECCCCceeEEEeCCC-C-------CcEEEEEEccCCC--eE
Q 006360 2 YNCKDEHLASISLSG-------------------DLILHNLASGAKAAELKDPN-E-------QVLRVLDYSRNSR--HL 52 (648)
Q Consensus 2 FSpdG~~Lasgs~DG-------------------~V~IwDl~sg~~i~~l~~~~-~-------~~V~~Vafspdg~--~l 52 (648)
|++++.+++.+..++ .|+.+|..+|+.+..++..+ . .......+..+++ .+
T Consensus 237 ~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~ 316 (668)
T 1kv9_A 237 YDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKV 316 (668)
T ss_dssp EETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEE
T ss_pred EcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEE
Confidence 456677888777665 39999999999998887532 1 1222223333553 35
Q ss_pred EEEEeCCCeEEEEECCCCCceeEEeccCC------------CC------------------------eEEEEEccCCCEE
Q 006360 53 LVTAGDDGTLHLWDTTGRSPKVSWLKQHS------------AP------------------------TAGISFSSDDKII 96 (648)
Q Consensus 53 LaSgs~Dg~V~IWDl~t~~~~v~~l~~H~------------~~------------------------V~slafsPdg~~L 96 (648)
++.++.+|.++++|..+++.... ..... .. -..++++|+..++
T Consensus 317 v~~~~~~G~l~~lD~~tG~~l~~-~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~ 395 (668)
T 1kv9_A 317 LMQAPKNGFFYVLDRTNGKLISA-EKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLV 395 (668)
T ss_dssp EEECCTTSEEEEEETTTCCEEEE-EESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEE
T ss_pred EEEECCCCEEEEEECCCCCEecc-ccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEE
Confidence 88889999999999988874311 11000 00 0126778876666
Q ss_pred EEEe------------------------------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEE
Q 006360 97 ASVG------------------------------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAG 140 (648)
Q Consensus 97 aSgs------------------------------------~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasg 140 (648)
+... .+|.|+.||+.+++.+-.+.....+....+...+.+|+++
T Consensus 396 yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g 475 (668)
T 1kv9_A 396 YIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG 475 (668)
T ss_dssp EEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE
T ss_pred EEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE
Confidence 5421 2478999999999988776655555544555678899999
Q ss_pred EcCCeEEEEECCCCC
Q 006360 141 TSNGRVVFYDIRGKP 155 (648)
Q Consensus 141 s~DG~V~IWDl~s~~ 155 (648)
+.||.|++||.++++
T Consensus 476 ~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 476 TAAGQMHAYSADKGE 490 (668)
T ss_dssp CTTSEEEEEETTTCC
T ss_pred CCcccchhhhhhcCh
Confidence 999999999999884
No 253
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.90 E-value=0.00061 Score=69.35 Aligned_cols=171 Identities=12% Similarity=0.108 Sum_probs=108.3
Q ss_pred ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEE
Q 006360 27 AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLY 106 (648)
Q Consensus 27 ~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~ 106 (648)
+.+.++..........+.|+ ++.++++.+.+|.|+++|+.+++..... ....-.-..+++. .+++++..-.++.+.
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~-g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD-GERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC-SSCEEEEESSSCEEE
T ss_pred EEEEEEcCCCccccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe-CCEEEEEEccCCEEE
Confidence 34556653334556788887 3458888899999999999998854333 2211112335554 345555566788999
Q ss_pred EEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCC---CeeEEEEccCCCeEE
Q 006360 107 TYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSE---AVSSLCWQRAKPVFI 183 (648)
Q Consensus 107 IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~---~VtsLafspdg~~La 183 (648)
+||..+.+.+..+.....-..++ +|+..|+....++.|+++|..+.+ ....+....+.. .+..+.|. +|
T Consensus 120 V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~-v~~~I~V~~~g~~v~~lNeLe~~-dG---- 191 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFA-LVGAVQVKLRGQPVELINELECA-NG---- 191 (268)
T ss_dssp EEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEE-TT----
T ss_pred EEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCe-EEEEEEeCCCCcccccccccEEe-CC----
Confidence 99999999998887554444444 568888888889999999999873 334443222222 34556665 33
Q ss_pred EeccCCCCeEEEEeeCCCeEEcCCCCCCCCcccc
Q 006360 184 DETTCKAETALLGGAVGDSILMPDPLPSVTTSSV 217 (648)
Q Consensus 184 s~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss~ 217 (648)
.+++..-.++.|.+.|+..-.....+
T Consensus 192 --------~lyanvw~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 192 --------VIYANIWHSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp --------EEEEEETTCSEEEEECTTTCBEEEEE
T ss_pred --------EEEEEECCCCeEEEEeCCCCcEEEEE
Confidence 33333334566677676655444433
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.89 E-value=0.00046 Score=77.94 Aligned_cols=139 Identities=12% Similarity=0.061 Sum_probs=94.4
Q ss_pred cEEEEECCCCceeEEEeCCC---------CCcEEEEEEccCCC--eEEEEEeCCCeEEEEECCCCCceeEEeccC-C---
Q 006360 17 DLILHNLASGAKAAELKDPN---------EQVLRVLDYSRNSR--HLLVTAGDDGTLHLWDTTGRSPKVSWLKQH-S--- 81 (648)
Q Consensus 17 ~V~IwDl~sg~~i~~l~~~~---------~~~V~~Vafspdg~--~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H-~--- 81 (648)
.|+.+|..+|+.+..++..+ ...+. +....+++ .+++.++.+|.++++|..+++.....-... .
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 59999999999998887422 12221 23334664 367788899999999998887432221111 0
Q ss_pred --------CCe--------------------------EEEEEccCCCEEEEEe---------------------------
Q 006360 82 --------APT--------------------------AGISFSSDDKIIASVG--------------------------- 100 (648)
Q Consensus 82 --------~~V--------------------------~slafsPdg~~LaSgs--------------------------- 100 (648)
.+| ..++|+|+..+|+...
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 111 2357888777776654
Q ss_pred ----------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCC
Q 006360 101 ----------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (648)
Q Consensus 101 ----------~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~ 156 (648)
.++.|..||+.+++.+-.+.....+....+...+..|++++.||.|+.||.++++.
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 34789999999999887766555544444444567888899999999999999854
No 255
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.89 E-value=0.0013 Score=67.31 Aligned_cols=179 Identities=11% Similarity=0.065 Sum_probs=104.1
Q ss_pred CccCCCCEEEEEECC--CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 006360 1 MYNCKDEHLASISLS--GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (648)
Q Consensus 1 AFSpdG~~Lasgs~D--G~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~ 78 (648)
+|.++|+++++.... ..|..+|..+++...............+++.+++. ++++-..++.|+++|..++...+....
T Consensus 78 a~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~v~~~~ 156 (306)
T 2p4o_A 78 AFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEH 156 (306)
T ss_dssp EECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcEeEEEEC
Confidence 467888865554332 24777787777654333322233344555554443 455544688999999875421121111
Q ss_pred ---------cCCCCeEEEEEccCCCEEEEE-eCCCeEEEEeCCC-Cce--eeEeeCCCCeEEEEEeCCCCEEEEEEcCCe
Q 006360 79 ---------QHSAPTAGISFSSDDKIIASV-GLDKKLYTYDPGS-RRP--SSCITYEAPFSSLAFIDDDWILTAGTSNGR 145 (648)
Q Consensus 79 ---------~H~~~V~slafsPdg~~LaSg-s~Dg~I~IWDl~t-gk~--v~~~~h~~~I~slafsPdG~~Lasgs~DG~ 145 (648)
..-...+.| ++++++|+.+ ...+.|+.||+.. ++. ...+........++++++|+++++....+.
T Consensus 157 ~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~ 234 (306)
T 2p4o_A 157 PMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNS 234 (306)
T ss_dssp GGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCC
T ss_pred CccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCe
Confidence 111235566 7777765554 5567999999874 332 122222245677899999988777667788
Q ss_pred EEEEECCCCCCceEEEeecCCCCCeeEEEEc---cCCCeEEE
Q 006360 146 VVFYDIRGKPQPLTVLRACSSSEAVSSLCWQ---RAKPVFID 184 (648)
Q Consensus 146 V~IWDl~s~~~~~~~l~~~~h~~~VtsLafs---pdg~~Las 184 (648)
|.+||.... ...+..........++++|. ++++.|+.
T Consensus 235 V~~~~~~G~--~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyV 274 (306)
T 2p4o_A 235 VVRIAPDRS--TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYV 274 (306)
T ss_dssp EEEECTTCC--EEEEECGGGTCTTEEEEEECCSTTTTTEEEE
T ss_pred EEEECCCCC--EEEEeecccccCCceEEEEecccCCCCEEEE
Confidence 999998632 11121211223568899998 77555443
No 256
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.83 E-value=0.00034 Score=71.16 Aligned_cols=160 Identities=13% Similarity=0.074 Sum_probs=100.4
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCe
Q 006360 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPT 84 (648)
Q Consensus 5 dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V 84 (648)
+|. |..++.++.|+.||.. ++.+..+.. ....+.++.+..++. |+.++ +.|+.|| .++.. ..........+
T Consensus 147 ~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~d~~g~--l~v~t--~~l~~~d-~~g~~-~~~~~~~~~~~ 217 (330)
T 3hxj_A 147 DGT-IYVGSNDNYLYAINPD-GTEKWRFKT-NDAITSAASIGKDGT--IYFGS--DKVYAIN-PDGTE-KWNFYAGYWTV 217 (330)
T ss_dssp TSC-EEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTCC--EEEES--SSEEEEC-TTSCE-EEEECCSSCCC
T ss_pred CCE-EEEEcCCCEEEEECCC-CCEeEEEec-CCCceeeeEEcCCCE--EEEEe--CEEEEEC-CCCcE-EEEEccCCcce
Confidence 455 5567778999999987 887776664 344556667767776 44444 7899999 55443 33344445668
Q ss_pred EEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeC-CCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEee
Q 006360 85 AGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY-EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRA 163 (648)
Q Consensus 85 ~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h-~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~ 163 (648)
.++.+.+++. |+.++.++.|..+|. +++.+..+.. ...+..+.+.+++ .|.+++.+|.|+.||. ++ .....+.
T Consensus 218 ~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g-~~~~~~~- 291 (330)
T 3hxj_A 218 TRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DG-TEKWNFE- 291 (330)
T ss_dssp SCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TS-CEEEEEE-
T ss_pred eceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CC-cEEEEEE-
Confidence 8888887775 555677788888885 4555544432 2334455565555 5777888888999996 33 2222332
Q ss_pred cCCCCCeeEEEEccCCC
Q 006360 164 CSSSEAVSSLCWQRAKP 180 (648)
Q Consensus 164 ~~h~~~VtsLafspdg~ 180 (648)
.....+.++....+|.
T Consensus 292 -~~~~~~~~~~~d~~g~ 307 (330)
T 3hxj_A 292 -TGSWIIATPVIDENGT 307 (330)
T ss_dssp -CSSCCCSCCEECTTCC
T ss_pred -cCCccccceEEcCCCE
Confidence 2334455666555443
No 257
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.82 E-value=0.00068 Score=68.89 Aligned_cols=170 Identities=13% Similarity=0.135 Sum_probs=104.7
Q ss_pred eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC--eEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEE-EeCCCe
Q 006360 28 KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIAS-VGLDKK 104 (648)
Q Consensus 28 ~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg--~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaS-gs~Dg~ 104 (648)
.+.++..........+.|+ ++ .++.+.+.+| .|+++|+.+++.. ..+.-. .........+++..|+. .-.++.
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~-~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTL-QQIELG-KRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEE-EEEECC-TTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEecCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEE-EEEecC-CccceeEEEEeCCEEEEEEeeCCE
Confidence 4556653334556889998 55 4777777776 8999999998853 333322 23333323333444444 445889
Q ss_pred EEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCC---CCeeEEEEccCCCe
Q 006360 105 LYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSS---EAVSSLCWQRAKPV 181 (648)
Q Consensus 105 I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~---~~VtsLafspdg~~ 181 (648)
+.+||..+.+.+..+.....-..+ ++|+..|+....++.|+++|..+.+ ....+...... ..+..+.|. +|
T Consensus 109 v~v~D~~t~~~~~ti~~~~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~-v~~~I~V~~~g~~~~~lNELe~~-~G-- 182 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDGEGWGL--THNDQYLIMSDGTPVLRFLDPESLT-PVRTITVTAHGEELPELNELEWV-DG-- 182 (262)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCE--EECSSCEEECCSSSEEEEECTTTCS-EEEEEECEETTEECCCEEEEEEE-TT--
T ss_pred EEEEECccCcEEEEEECCCCceEE--ecCCCEEEEECCCCeEEEEcCCCCe-EEEEEEeccCCccccccceeEEE-CC--
Confidence 999999999999888755433334 4577888877778889999999873 33443322122 223456664 33
Q ss_pred EEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcccc
Q 006360 182 FIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSV 217 (648)
Q Consensus 182 Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss~ 217 (648)
.+++..-.++.|.+.|+..-.....+
T Consensus 183 ----------~lyan~w~~~~I~vIDp~tG~V~~~I 208 (262)
T 3nol_A 183 ----------EIFANVWQTNKIVRIDPETGKVTGII 208 (262)
T ss_dssp ----------EEEEEETTSSEEEEECTTTCBEEEEE
T ss_pred ----------EEEEEEccCCeEEEEECCCCcEEEEE
Confidence 33333444666777776655444433
No 258
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.82 E-value=0.00097 Score=75.50 Aligned_cols=141 Identities=13% Similarity=0.154 Sum_probs=91.4
Q ss_pred CcEEEEECCCCceeEEEeCCCC---------CcEEEEEEc-cCCC--eEEEEEeCCCeEEEEECCCCCceeEEeccC-C-
Q 006360 16 GDLILHNLASGAKAAELKDPNE---------QVLRVLDYS-RNSR--HLLVTAGDDGTLHLWDTTGRSPKVSWLKQH-S- 81 (648)
Q Consensus 16 G~V~IwDl~sg~~i~~l~~~~~---------~~V~~Vafs-pdg~--~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H-~- 81 (648)
+.|..+|..+|+.+..++..+. ..+. +... .+++ .+++.++.+|.++++|..+++.....-... .
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 5899999999999988864221 1221 2222 4564 368888999999999998887432211111 0
Q ss_pred ----------CC--------------------------------eEEEEEccCCCEEEEEe-------------------
Q 006360 82 ----------AP--------------------------------TAGISFSSDDKIIASVG------------------- 100 (648)
Q Consensus 82 ----------~~--------------------------------V~slafsPdg~~LaSgs------------------- 100 (648)
.+ -..++++|+..++++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 00 01346667555554432
Q ss_pred --------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCc
Q 006360 101 --------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (648)
Q Consensus 101 --------------~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~ 157 (648)
.+|.|..||+.+++.+-......++..-.+...+.++++|+.||.|+.||.++++..
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 257899999999998766654444332222335678888999999999999998543
No 259
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.78 E-value=0.0052 Score=65.56 Aligned_cols=184 Identities=10% Similarity=-0.045 Sum_probs=117.4
Q ss_pred EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEE
Q 006360 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGI 87 (648)
Q Consensus 8 ~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~sl 87 (648)
+|+.+ ....|+.+++........+. .......++|.+.++.++++-...+.|+.|++.+... ...+.........+
T Consensus 89 ~l~~~-~~~~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~~~~~~~p~gl 164 (386)
T 3v65_B 89 VLLFA-NRIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVVSTGLESPGGL 164 (386)
T ss_dssp EEEEE-CBSCEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE-EEEECSSCSCCCCE
T ss_pred eeEee-cCccceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc-EEEEeCCCCCccEE
Confidence 44434 34568888886554443333 2344677999987776777766788999999987653 22333333456788
Q ss_pred EEccC-CCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEEc-C-CeEEEEECCCCCCceEEEee
Q 006360 88 SFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTS-N-GRVVFYDIRGKPQPLTVLRA 163 (648)
Q Consensus 88 afsPd-g~~LaSgs~Dg~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs~-D-G~V~IWDl~s~~~~~~~l~~ 163 (648)
++.+. ++++++-...+.|.++++........+. .......++++|.+..|+.... + +.|+.+++..... ..+..
T Consensus 165 avd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~--~~~~~ 242 (386)
T 3v65_B 165 AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR--RIIAD 242 (386)
T ss_dssp EEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EEEEC
T ss_pred EEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc--EEEEE
Confidence 99884 5555556667789999987554333332 3456789999997666665553 4 6899999886532 22221
Q ss_pred cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 164 CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 164 ~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
..-.....|+|++++. .++++-...+.|..+|+.
T Consensus 243 -~~~~~PnGlavd~~~~-----------~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 243 -THLFWPNGLTIDYAGR-----------RMYWVDAKHHVIERANLD 276 (386)
T ss_dssp -SSCSCEEEEEEEGGGT-----------EEEEEETTTTEEEEECTT
T ss_pred -CCCCCeeeEEEeCCCC-----------EEEEEECCCCEEEEEeCC
Confidence 2234578899987533 344444556677777764
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.68 E-value=0.014 Score=61.19 Aligned_cols=169 Identities=8% Similarity=-0.041 Sum_probs=104.2
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 2 FSpdG~~Lasgs-~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
|++.+..|+... ..+.|+.+++........+.. .......+++.+.+.+++++-...+.|.++++++... ...+...
T Consensus 80 ~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~ 157 (349)
T 3v64_C 80 FHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQS 157 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTT
T ss_pred EeccccEEEEEeccCCceEEEecCCCCceEEEeC-CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCC
Confidence 555555555443 456777777754433222221 2223456888876666777777788999999987653 2233344
Q ss_pred CCCeEEEEEccCCCEE-EEEeCC-CeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECCCCCC
Q 006360 81 SAPTAGISFSSDDKII-ASVGLD-KKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQ 156 (648)
Q Consensus 81 ~~~V~slafsPdg~~L-aSgs~D-g~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~s~~~ 156 (648)
-.....+++.|.+..| ++-... +.|..+|+........+. .......++|++++..|+... ..+.|..+|+.....
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~ 237 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR 237 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce
Confidence 4568999999955544 444444 789999987544333322 345678999998777776665 467899999886422
Q ss_pred ceEEEeecCCCCCeeEEEE
Q 006360 157 PLTVLRACSSSEAVSSLCW 175 (648)
Q Consensus 157 ~~~~l~~~~h~~~VtsLaf 175 (648)
..++. .......+|++
T Consensus 238 -~~~~~--~~~~~P~giav 253 (349)
T 3v64_C 238 -KAVIS--QGLPHPFAITV 253 (349)
T ss_dssp -EEEEC--SSCSSEEEEEE
T ss_pred -EEEEe--CCCCCceEEEE
Confidence 22222 22344566666
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.68 E-value=0.012 Score=61.73 Aligned_cols=184 Identities=10% Similarity=-0.036 Sum_probs=115.1
Q ss_pred EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEE
Q 006360 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGI 87 (648)
Q Consensus 8 ~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~sl 87 (648)
+|+.+ ....|+..++........+. .......++|.+.++.++++-...+.|+.+++.+... ...+.........+
T Consensus 46 ~ll~~-~~~~I~~i~~~g~~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~~~~~~~p~gl 121 (349)
T 3v64_C 46 VLLFA-NRIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVVSTGLESPGGL 121 (349)
T ss_dssp EEEEE-CBSCEEEECTTSCCEEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCEE
T ss_pred eeEee-cccceEEEeCCCCeeEEeec--CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc-eEEEeCCCCCccEE
Confidence 34434 34568888875544433333 2334677999987775777766788999999987653 22333333456789
Q ss_pred EEcc-CCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEE-cC-CeEEEEECCCCCCceEEEee
Q 006360 88 SFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT-SN-GRVVFYDIRGKPQPLTVLRA 163 (648)
Q Consensus 88 afsP-dg~~LaSgs~Dg~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs-~D-G~V~IWDl~s~~~~~~~l~~ 163 (648)
++.+ .++++++-...+.|.++++........+. .......++++|.+..|+... .+ +.|..+++..... ..+..
T Consensus 122 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~--~~~~~ 199 (349)
T 3v64_C 122 AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR--RIIAD 199 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EESCC
T ss_pred EEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc--EEEEE
Confidence 9998 45555666667899999987654333332 345678999999666665554 44 7899999886522 22211
Q ss_pred cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 164 CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 164 ~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
..-.....|+|++++.. ++++-...+.|..+|+.
T Consensus 200 -~~~~~PnGla~d~~~~~-----------lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 200 -THLFWPNGLTIDYAGRR-----------MYWVDAKHHVIERANLD 233 (349)
T ss_dssp -SSCSCEEEEEEETTTTE-----------EEEEETTTTEEEEEETT
T ss_pred -CCCCCcceEEEeCCCCE-----------EEEEECCCCEEEEEeCC
Confidence 22345788999986443 33444445566666553
No 262
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.67 E-value=0.0043 Score=64.60 Aligned_cols=185 Identities=8% Similarity=-0.024 Sum_probs=115.1
Q ss_pred EEEEEECCCcEEEEECCCCc--eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeE
Q 006360 8 HLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTA 85 (648)
Q Consensus 8 ~Lasgs~DG~V~IwDl~sg~--~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~ 85 (648)
+|+.+ ....|+.+++.... ....+. .......++|.+.++.++++-...+.|+.++..+.......+...-....
T Consensus 6 ~ll~~-~~~~I~~i~l~~~~~~~~~~~~--~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~ 82 (318)
T 3sov_A 6 LLLYA-NRRDLRLVDATNGKENATIVVG--GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 82 (318)
T ss_dssp EEEEE-CEEEEEEEETTCTTSCCEEEEE--EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC
T ss_pred EEEEE-ccCeEEEEECCCCceEEEEEec--CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc
Confidence 44444 34679999987653 111222 12345578999876657777677889999999776421222233334577
Q ss_pred EEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEc--CCeEEEEECCCCCCceEEE
Q 006360 86 GISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTS--NGRVVFYDIRGKPQPLTVL 161 (648)
Q Consensus 86 slafsP-dg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~--DG~V~IWDl~s~~~~~~~l 161 (648)
.+++.+ .++++++-...+.|.++|+........+ ........++++|.+..|+.... .+.|..+++..... ..+
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~--~~~ 160 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR--FII 160 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC--EEE
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe--EEE
Confidence 899987 5555566666789999998765433333 34456789999997666666653 57899999876422 222
Q ss_pred eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 162 RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 162 ~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
.. ..-.....|+|++++..| +++-...+.|..+|+.
T Consensus 161 ~~-~~l~~Pnglavd~~~~~l-----------Y~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 161 IN-SEIYWPNGLTLDYEEQKL-----------YWADAKLNFIHKSNLD 196 (318)
T ss_dssp EC-SSCSCEEEEEEETTTTEE-----------EEEETTTTEEEEEETT
T ss_pred EE-CCCCCccEEEEeccCCEE-----------EEEECCCCEEEEEcCC
Confidence 21 223456889999864433 3444445566666553
No 263
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.67 E-value=0.0011 Score=69.39 Aligned_cols=136 Identities=10% Similarity=-0.011 Sum_probs=92.8
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeE
Q 006360 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTA 85 (648)
Q Consensus 6 G~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~ 85 (648)
+..++.++.++.|+.+|..+|+.+..... .....+... +. .++.++.++.|+.||..+++.....-......+.
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~---~~~~~~~~~--~~-~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~ 312 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKREL---GSVNDFIVD--GN-RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLT 312 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECC---CCEEEEEEE--TT-EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCC
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccC---CCCCCceEE--CC-EEEEEcCCCeEEEEECCCCcEEEeecccCCCccc
Confidence 45677788899999999999998877653 223334333 44 5777788999999999888743222111222233
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeC-CCCeEE-EEEeCCCCEEEEEEcCCeEEEEEC
Q 006360 86 GISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY-EAPFSS-LAFIDDDWILTAGTSNGRVVFYDI 151 (648)
Q Consensus 86 slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h-~~~I~s-lafsPdG~~Lasgs~DG~V~IWDl 151 (648)
.... .+..|+.++.+|.|+++|..+++.+..... ...+.. ... .+..|++++.+|.|+.||.
T Consensus 313 ~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~~ 376 (376)
T 3q7m_A 313 SPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSITR 376 (376)
T ss_dssp CCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEEC
T ss_pred CCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEeC
Confidence 3333 357888999999999999999998766643 333322 222 2557888999999999873
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.66 E-value=0.012 Score=62.63 Aligned_cols=188 Identities=9% Similarity=-0.032 Sum_probs=113.0
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 2 FSpdG~~Lasgs-~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
|++.+..|+... ..+.|+.+++........+.. .......+++.+.+.+++++-...+.|.++++.+... ...+...
T Consensus 123 ~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-~~l~~~~ 200 (386)
T 3v65_B 123 FHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQS 200 (386)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCCEEEEECS-SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-EEEECSS
T ss_pred EecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC-CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-EEeecCC
Confidence 555555555443 456788888754443332222 2223345788876666777777778899999877653 2333344
Q ss_pred CCCeEEEEEccCCCEEEEEe-CC-CeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECCCCCC
Q 006360 81 SAPTAGISFSSDDKIIASVG-LD-KKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQ 156 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs-~D-g~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~s~~~ 156 (648)
......|++.|.+..|+... .. +.|..+|+......... ........|+|++++..|+... ..+.|..+|+.....
T Consensus 201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 280 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR 280 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC
T ss_pred CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee
Confidence 46689999999655555444 44 68999998754433333 2344578999998776666655 467899999876422
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCC
Q 006360 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (648)
Q Consensus 157 ~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWD 207 (648)
..++. ........|++. .+.++++....+.|..+|
T Consensus 281 -~~~~~--~~~~~P~giav~-------------~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 281 -KAVIS--QGLPHPFAITVF-------------EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp -EEEEC--SSCSSEEEEEEE-------------TTEEEEEETTTTEEEEEE
T ss_pred -EEEEE--CCCCCceEEEEE-------------CCEEEEeeCCCCeEEEEE
Confidence 22222 223445666663 233444444455565554
No 265
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.65 E-value=0.022 Score=61.06 Aligned_cols=185 Identities=7% Similarity=-0.050 Sum_probs=118.0
Q ss_pred EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC---ceeEEeccCCCCe
Q 006360 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---PKVSWLKQHSAPT 84 (648)
Q Consensus 8 ~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~---~~v~~l~~H~~~V 84 (648)
+|+.+ ....|+..++........+. ....+..|+|.+.++.++++-...+.|+.+++.+.. .....+.......
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEe-ccceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 44444 34689999986655444343 345567899998777566766677899999987621 1123334345568
Q ss_pred EEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEEc--CCeEEEEECCCCCCceEE
Q 006360 85 AGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTS--NGRVVFYDIRGKPQPLTV 160 (648)
Q Consensus 85 ~slafsP-dg~~LaSgs~Dg~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs~--DG~V~IWDl~s~~~~~~~ 160 (648)
..+++.+ .++++++-...+.|.+.|+........+. .......|+++|.+.+|+.... .+.|...++..... ...
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-~~~ 240 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSL 240 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-EEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-EEE
Confidence 8999998 55555666667899999988665544443 4456889999997666666553 36799999886532 222
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
+. ..-.....|+|++++..| +++-.....|..+|+.
T Consensus 241 ~~--~~l~~P~glavd~~~~~l-----------Y~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 241 VT--ENIQWPNGITLDLLSGRL-----------YWVDSKLHSISSIDVN 276 (400)
T ss_dssp EC--SSCSCEEEEEEETTTTEE-----------EEEETTTTEEEEEETT
T ss_pred EE--CCCCceEEEEEEeCCCEE-----------EEEECCCCEEEEEeCC
Confidence 22 233567889999864443 3444445566666653
No 266
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.64 E-value=0.0013 Score=76.60 Aligned_cols=135 Identities=11% Similarity=0.072 Sum_probs=88.1
Q ss_pred cEEEEEEc-cCCCeEEEEEeCCC----eEEEEECCCC-CceeEEeccCCCCeEEEEEccCCCEEEEEeCC-----CeEEE
Q 006360 39 VLRVLDYS-RNSRHLLVTAGDDG----TLHLWDTTGR-SPKVSWLKQHSAPTAGISFSSDDKIIASVGLD-----KKLYT 107 (648)
Q Consensus 39 ~V~~Vafs-pdg~~lLaSgs~Dg----~V~IWDl~t~-~~~v~~l~~H~~~V~slafsPdg~~LaSgs~D-----g~I~I 107 (648)
.+..++|+ |||+.++++...+| .|+++|+.++ +.....+. .....++|+||++.|+....| ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 56778999 99996666655544 4999999887 52111111 113468899999988887765 36899
Q ss_pred EeCCCCce--eeEe--eCCCCeEEEEEeCCCCEEEEEEc---CCeEEEEECCCCCCce--EEEeecCCCCCeeEEEEcc
Q 006360 108 YDPGSRRP--SSCI--TYEAPFSSLAFIDDDWILTAGTS---NGRVVFYDIRGKPQPL--TVLRACSSSEAVSSLCWQR 177 (648)
Q Consensus 108 WDl~tgk~--v~~~--~h~~~I~slafsPdG~~Lasgs~---DG~V~IWDl~s~~~~~--~~l~~~~h~~~VtsLafsp 177 (648)
+++.+++. ..++ ........+.|+|||++|+.... ...|+++|+.+..... ..+. ....+...++.|+.
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVR-PREKGVRYDVQMHG 329 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESS-CCCTTCCEEEEEET
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEee-cCCCCceEEEeeee
Confidence 99987753 2232 23345678899999999887663 3458999998753222 3232 13345566666554
No 267
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.63 E-value=0.0064 Score=61.03 Aligned_cols=170 Identities=17% Similarity=0.191 Sum_probs=105.9
Q ss_pred ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC--eEEEEECCCCCceeEEeccCCCCe--EEEEEccCCCEEEEEeCC
Q 006360 27 AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSWLKQHSAPT--AGISFSSDDKIIASVGLD 102 (648)
Q Consensus 27 ~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg--~V~IWDl~t~~~~v~~l~~H~~~V--~slafsPdg~~LaSgs~D 102 (648)
+.+.++.......+..+.|+. + .++.+.+.+| .|+++|+.+++.. ..+.-. ... ..+++. .+++++..-.+
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~-~~~~l~-~~~fgeGi~~~-~~~ly~ltw~~ 84 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRIL-QRAEVP-PPYFGAGIVAW-RDRLIQLTWRN 84 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEE-EEEECC-TTCCEEEEEEE-TTEEEEEESSS
T ss_pred EEEEEcCCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEE-EEEeCC-CCcceeEEEEe-CCEEEEEEeeC
Confidence 345666533356678899986 3 4777777754 8999999998853 333222 223 334443 34455555678
Q ss_pred CeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCC---CCeeEEEEccCC
Q 006360 103 KKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSS---EAVSSLCWQRAK 179 (648)
Q Consensus 103 g~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~---~~VtsLafspdg 179 (648)
+.+.+||..+.+.+..+.....-..++ +|+..|+.+..++.|+++|..+.+ ....+....+. ..+..+.|. +
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~-~~~~I~V~~~g~~~~~lNeLe~~-~- 159 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQ-QVGSIKVTAGGRPLDNLNELEWV-N- 159 (243)
T ss_dssp SEEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEE-T-
T ss_pred CEEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCe-EEEEEEEccCCcccccceeeEEe-C-
Confidence 899999999999999887655444454 567778888888999999999873 33444422222 234455654 2
Q ss_pred CeEEEeccCCCCeEEEEeeCCCeEEcCCCCCCCCcccc
Q 006360 180 PVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSV 217 (648)
Q Consensus 180 ~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~~~~ss~ 217 (648)
+.+++..-.++.|.+.|+..-.....+
T Consensus 160 -----------G~lyanvw~s~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 160 -----------GELLANVWLTSRIARIDPASGKVVAWI 186 (243)
T ss_dssp -----------TEEEEEETTTTEEEEECTTTCBEEEEE
T ss_pred -----------CEEEEEECCCCeEEEEECCCCCEEEEE
Confidence 333333334566666676655544443
No 268
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.59 E-value=0.042 Score=58.82 Aligned_cols=172 Identities=12% Similarity=-0.037 Sum_probs=105.0
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCc---eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006360 2 YNCKDEHLASIS-LSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (648)
Q Consensus 2 FSpdG~~Lasgs-~DG~V~IwDl~sg~---~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l 77 (648)
|++.+..|+... ..+.|+.+++.... ....+..........+++.+.+++++++-...+.|.+.|+++... ...+
T Consensus 119 ~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~-~~l~ 197 (400)
T 3p5b_L 119 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLF 197 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE-EEEE
T ss_pred eeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce-EEEE
Confidence 555555555444 34667777764311 122232223345667888886666777777788999999987763 2233
Q ss_pred ccCCCCeEEEEEccCCCEEEEEe-C-CCeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECCC
Q 006360 78 KQHSAPTAGISFSSDDKIIASVG-L-DKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRG 153 (648)
Q Consensus 78 ~~H~~~V~slafsPdg~~LaSgs-~-Dg~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~s 153 (648)
...-.....|++.|.+.+|+... . .+.|...++........+. .......|++++++..|+.+. ..+.|..+|+..
T Consensus 198 ~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 198 RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 33445689999999655555544 2 3689999987544433332 346788999999877777665 467899999986
Q ss_pred CCCceEEEeecCCCCCeeEEEE
Q 006360 154 KPQPLTVLRACSSSEAVSSLCW 175 (648)
Q Consensus 154 ~~~~~~~l~~~~h~~~VtsLaf 175 (648)
.. ...++..........+|++
T Consensus 278 ~~-~~~~~~~~~~l~~P~gl~v 298 (400)
T 3p5b_L 278 GN-RKTILEDEKRLAHPFSLAV 298 (400)
T ss_dssp CC-CEEEEECSSTTSSEEEEEE
T ss_pred Cc-cEEEEeCCCCCCCCEEEEE
Confidence 53 2233332122334556665
No 269
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.59 E-value=0.0072 Score=63.36 Aligned_cols=152 Identities=13% Similarity=0.161 Sum_probs=102.3
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEE-EeC----CC-CCcEEEEEE---ccCCCeEEEEEe-------------C
Q 006360 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAE-LKD----PN-EQVLRVLDY---SRNSRHLLVTAG-------------D 58 (648)
Q Consensus 2 FSpdG~~Lasgs-~DG~V~IwDl~sg~~i~~-l~~----~~-~~~V~~Vaf---spdg~~lLaSgs-------------~ 58 (648)
|++.+..|..++ ..+.|..||...+..... +.+ .. ...+..|.| .++++ ++++.. .
T Consensus 20 wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~~~g~~~~g 98 (334)
T 2p9w_A 20 YDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFNFADQSSHG 98 (334)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTTCTTSCCSSS
T ss_pred CcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCc-EEEEEcccccccccccccCC
Confidence 666556666665 689999999865544332 221 01 124578999 57765 565443 2
Q ss_pred CCeEEEEECC---CCCceeE-Eecc-----------CCCCeEEEEEccCCCEEEEEeCC-CeEEEEeCCCCceeeEe-e-
Q 006360 59 DGTLHLWDTT---GRSPKVS-WLKQ-----------HSAPTAGISFSSDDKIIASVGLD-KKLYTYDPGSRRPSSCI-T- 120 (648)
Q Consensus 59 Dg~V~IWDl~---t~~~~v~-~l~~-----------H~~~V~slafsPdg~~LaSgs~D-g~I~IWDl~tgk~v~~~-~- 120 (648)
+..|..||+. +++.... .+.. -...+++++..++|+..++++.. +.|..+|.......... .
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~ 178 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES 178 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC
Confidence 6789999998 5553322 2211 11248899999999999999988 88888887654322221 1
Q ss_pred ----CCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCC
Q 006360 121 ----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (648)
Q Consensus 121 ----h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~ 154 (648)
.....+.|+++|+|+.|++...+|.|..+|++..
T Consensus 179 ~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 179 GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 1223679999999999998877999999999853
No 270
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.54 E-value=0.005 Score=69.92 Aligned_cols=153 Identities=8% Similarity=-0.018 Sum_probs=99.7
Q ss_pred CCCCEEEEEECC----------------CcEEEEECCCCceeEEEeCCCC---------CcEEEEEEc-cCCC--eEEEE
Q 006360 4 CKDEHLASISLS----------------GDLILHNLASGAKAAELKDPNE---------QVLRVLDYS-RNSR--HLLVT 55 (648)
Q Consensus 4 pdG~~Lasgs~D----------------G~V~IwDl~sg~~i~~l~~~~~---------~~V~~Vafs-pdg~--~lLaS 55 (648)
++..+|+.+..+ +.|..+|..+|+.+..++..+. ..+. +... .+++ .+++.
T Consensus 250 ~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~ 328 (599)
T 1w6s_A 250 PGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTH 328 (599)
T ss_dssp TTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEE
T ss_pred CCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEE
Confidence 456677766554 3799999999999988875432 1121 2332 4563 36778
Q ss_pred EeCCCeEEEEECCCCCceeEEeccC------------CCCe--------------------------EEEEEccCCCEEE
Q 006360 56 AGDDGTLHLWDTTGRSPKVSWLKQH------------SAPT--------------------------AGISFSSDDKIIA 97 (648)
Q Consensus 56 gs~Dg~V~IWDl~t~~~~v~~l~~H------------~~~V--------------------------~slafsPdg~~La 97 (648)
++.+|.++++|..+++.....-... ..+| ..++|+|+..+++
T Consensus 329 ~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~y 408 (599)
T 1w6s_A 329 PDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFF 408 (599)
T ss_dssp ECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEE
T ss_pred ECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEE
Confidence 8999999999998887532221110 0011 2356777666555
Q ss_pred EEe---------------------------------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEE
Q 006360 98 SVG---------------------------------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (648)
Q Consensus 98 Sgs---------------------------------------~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~La 138 (648)
+.. .+|.|..||+.+++.+-...+..++..-.+...+.+|+
T Consensus 409 v~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf 488 (599)
T 1w6s_A 409 MGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVF 488 (599)
T ss_dssp EEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEE
T ss_pred EeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEE
Confidence 431 34789999999999876665443333222333577888
Q ss_pred EEEcCCeEEEEECCCCCCc
Q 006360 139 AGTSNGRVVFYDIRGKPQP 157 (648)
Q Consensus 139 sgs~DG~V~IWDl~s~~~~ 157 (648)
.++.||.|+.||.++++..
T Consensus 489 ~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 489 YGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp EECTTSEEEEEETTTCCEE
T ss_pred EECCCCeEEEEECCCCCEE
Confidence 8999999999999998543
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.52 E-value=0.0022 Score=69.65 Aligned_cols=150 Identities=8% Similarity=0.069 Sum_probs=95.6
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCC----eEEEEECCCCCceeE
Q 006360 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG----TLHLWDTTGRSPKVS 75 (648)
Q Consensus 1 AFSp-dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg----~V~IWDl~t~~~~v~ 75 (648)
||+| ++..|+++...+.|+.+|+..+... .+.. .......|+|+++++.++++...++ .+.+++.........
T Consensus 143 avdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~ 220 (430)
T 3tc9_A 143 SFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVIT 220 (430)
T ss_dssp EEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEE
T ss_pred EECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeee
Confidence 3566 3555666655578999998655543 3332 3455678999999985555544322 344455433321112
Q ss_pred EeccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCCceeeEee--CCCCeEEEEEeCCCCEEEEEE-cCCeEEEEEC
Q 006360 76 WLKQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAGT-SNGRVVFYDI 151 (648)
Q Consensus 76 ~l~~H~~~V~slafsP-dg~~LaSgs~Dg~I~IWDl~tgk~v~~~~--h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl 151 (648)
.+.. .....+++++| ++.++++-..++.|+.||...+....... .......++|+|+|++|+... ..+.|+.|+.
T Consensus 221 ~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 221 ELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp EEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred eecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence 2222 23467889999 77777777778899999998766533332 234578999999999665554 5778999887
Q ss_pred CC
Q 006360 152 RG 153 (648)
Q Consensus 152 ~s 153 (648)
..
T Consensus 300 d~ 301 (430)
T 3tc9_A 300 DW 301 (430)
T ss_dssp ET
T ss_pred Cc
Confidence 64
No 272
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.50 E-value=0.03 Score=58.12 Aligned_cols=189 Identities=9% Similarity=-0.040 Sum_probs=109.4
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCcee-EEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006360 2 YNCKDEHLASIS-LSGDLILHNLASGAKA-AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (648)
Q Consensus 2 FSpdG~~Lasgs-~DG~V~IwDl~sg~~i-~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~ 79 (648)
|++.+..|+... ..+.|+.+++..+... ..+.. .-.....+++.+.+.+++++-...+.|.++++++.... ..+..
T Consensus 42 ~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~-~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-~l~~~ 119 (318)
T 3sov_A 42 FVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VLFWQ 119 (318)
T ss_dssp EEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE-CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECS
T ss_pred EEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC-CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE-EEEeC
Confidence 344333343332 3455666666443211 11111 11233457888766657777677789999999876532 23334
Q ss_pred CCCCeEEEEEccCCCEEEEEe--CCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECCCCC
Q 006360 80 HSAPTAGISFSSDDKIIASVG--LDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKP 155 (648)
Q Consensus 80 H~~~V~slafsPdg~~LaSgs--~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~s~~ 155 (648)
.......+++.|.+..|+... ..+.|..+++......... ..-.....++|++++..|+.+. ..+.|..+|+....
T Consensus 120 ~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~ 199 (318)
T 3sov_A 120 ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 199 (318)
T ss_dssp SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc
Confidence 455689999999655555554 3578999888644333332 2334678999999777776665 46789999998642
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCC
Q 006360 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (648)
Q Consensus 156 ~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDl 208 (648)
. +++.. .......++++.. +.++++....+.|..+|.
T Consensus 200 ~--~~~~~-~~~~~P~glav~~-------------~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 200 R--QAVVK-GSLPHPFALTLFE-------------DILYWTDWSTHSILACNK 236 (318)
T ss_dssp C--EEEEC-SCCSCEEEEEEET-------------TEEEEEETTTTEEEEEET
T ss_pred e--EEEec-CCCCCceEEEEeC-------------CEEEEEecCCCeEEEEEC
Confidence 2 22221 2334455666642 234444444556666555
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.48 E-value=0.0059 Score=66.37 Aligned_cols=149 Identities=9% Similarity=0.040 Sum_probs=92.8
Q ss_pred CccCC--CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCC---C-eEEEEECCCCCcee
Q 006360 1 MYNCK--DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD---G-TLHLWDTTGRSPKV 74 (648)
Q Consensus 1 AFSpd--G~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~D---g-~V~IWDl~t~~~~v 74 (648)
+|+++ +..|+.+...+.|+.+|..++.... +.. .......|+|+++++ ++++.... . .+..++........
T Consensus 145 avd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~ 221 (433)
T 4hw6_A 145 MFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTER 221 (433)
T ss_dssp EECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCE
T ss_pred EEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecc
Confidence 35663 4455555554889999987666544 332 345578899999998 66664321 1 23334433222111
Q ss_pred EEeccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCCCCcee-eEee--CCCCeEEEEEeCCCCEEEEEE-cCCeEEEE
Q 006360 75 SWLKQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPS-SCIT--YEAPFSSLAFIDDDWILTAGT-SNGRVVFY 149 (648)
Q Consensus 75 ~~l~~H~~~V~slafsP-dg~~LaSgs~Dg~I~IWDl~tgk~v-~~~~--h~~~I~slafsPdG~~Lasgs-~DG~V~IW 149 (648)
..+. .-.....++++| ++.++++-..++.|+.+|..++... ..+. .......++|+|+|++|++.. ..+.|+.+
T Consensus 222 ~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~ 300 (433)
T 4hw6_A 222 LSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRV 300 (433)
T ss_dssp EEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred cccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEE
Confidence 1111 234467789999 7776666667789999999877762 2222 222345799999999666555 56789998
Q ss_pred ECCC
Q 006360 150 DIRG 153 (648)
Q Consensus 150 Dl~s 153 (648)
|+..
T Consensus 301 ~~d~ 304 (433)
T 4hw6_A 301 DYNR 304 (433)
T ss_dssp EBCT
T ss_pred eCCC
Confidence 8763
No 274
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.47 E-value=0.0016 Score=74.45 Aligned_cols=182 Identities=10% Similarity=0.032 Sum_probs=102.8
Q ss_pred cCCCCEEEEEEC-CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEe-CC-----CeEEEEECCCCCceeE
Q 006360 3 NCKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG-DD-----GTLHLWDTTGRSPKVS 75 (648)
Q Consensus 3 SpdG~~Lasgs~-DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs-~D-----g~V~IWDl~t~~~~v~ 75 (648)
..+|+.++.|+. ++.+.+||..+.+-...-.......-.++++.++++ +++.|+ .+ ..+.+||..+......
T Consensus 251 ~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 251 DGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp CTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred CCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 468888888884 458999998766433211111122223455666787 777777 44 5689999866542110
Q ss_pred ------------------------EeccCC---------------------------------------CCeEEEEEcc-
Q 006360 76 ------------------------WLKQHS---------------------------------------APTAGISFSS- 91 (648)
Q Consensus 76 ------------------------~l~~H~---------------------------------------~~V~slafsP- 91 (648)
.+-+.. ..-.++.|..
T Consensus 330 ~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~ 409 (656)
T 1k3i_A 330 PNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAV 409 (656)
T ss_dssp TTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETT
T ss_pred CCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCC
Confidence 000000 0112333333
Q ss_pred CCCEEEEEeCCC-----------eEEEEeCCCCceeeEe--e-CCCC-eEEEEEeCCCCEEEEEEcC-----------Ce
Q 006360 92 DDKIIASVGLDK-----------KLYTYDPGSRRPSSCI--T-YEAP-FSSLAFIDDDWILTAGTSN-----------GR 145 (648)
Q Consensus 92 dg~~LaSgs~Dg-----------~I~IWDl~tgk~v~~~--~-h~~~-I~slafsPdG~~Lasgs~D-----------G~ 145 (648)
++++++.|+.++ .|.+||..+....... . .... -.+++..|+|+++++|+.+ ..
T Consensus 410 ~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~ 489 (656)
T 1k3i_A 410 KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFT 489 (656)
T ss_dssp TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCC
T ss_pred CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccc
Confidence 677777777543 6788888877654432 1 1222 2345667899999999864 46
Q ss_pred EEEEECCCCCCceEEEeecCC-CCCeeEEEEccCCCeEEEecc
Q 006360 146 VVFYDIRGKPQPLTVLRACSS-SEAVSSLCWQRAKPVFIDETT 187 (648)
Q Consensus 146 V~IWDl~s~~~~~~~l~~~~h-~~~VtsLafspdg~~Las~~~ 187 (648)
+.+||..+.. ...+....+ .....+..+.++|++++.++.
T Consensus 490 v~~ydp~t~~--W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 490 PEIYVPEQDT--FYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CEEEEGGGTE--EEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred eEEEcCCCCc--eeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 8999997652 222221111 122234456688887777653
No 275
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.46 E-value=0.0011 Score=75.68 Aligned_cols=150 Identities=16% Similarity=0.112 Sum_probs=88.4
Q ss_pred ccC-CCCEEEEEECCC-----------cEEEEECCCCce--eEEEeCCCCCcEEEEEEccCCCeEEEEEe-CCCeEEEEE
Q 006360 2 YNC-KDEHLASISLSG-----------DLILHNLASGAK--AAELKDPNEQVLRVLDYSRNSRHLLVTAG-DDGTLHLWD 66 (648)
Q Consensus 2 FSp-dG~~Lasgs~DG-----------~V~IwDl~sg~~--i~~l~~~~~~~V~~Vafspdg~~lLaSgs-~Dg~V~IWD 66 (648)
+.+ +|+.++.|+.++ .+.+||+.+++. +..+...+...+.++++..+++ +++.|+ .+..+.+||
T Consensus 193 v~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~-lyv~GG~~~~~v~~yd 271 (656)
T 1k3i_A 193 IEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGNDAKKTSLYD 271 (656)
T ss_dssp EETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSC-EEEECSSSTTCEEEEE
T ss_pred EEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCC-EEEeCCCCCCceEEec
Confidence 345 778888887543 588999887653 3334332333344567778887 777777 456899999
Q ss_pred CCCCCceeEEec-cCC-CCeEEEEEccCCCEEEEEe-CC-----CeEEEEeCCCCceeeEe-----eCCCCeEEEEEeCC
Q 006360 67 TTGRSPKVSWLK-QHS-APTAGISFSSDDKIIASVG-LD-----KKLYTYDPGSRRPSSCI-----TYEAPFSSLAFIDD 133 (648)
Q Consensus 67 l~t~~~~v~~l~-~H~-~~V~slafsPdg~~LaSgs-~D-----g~I~IWDl~tgk~v~~~-----~h~~~I~slafsPd 133 (648)
..+... ..+. .+. ..-.++++.+++++++.|+ .+ ..+.+||..+++-...- .....-....+..+
T Consensus 272 ~~t~~W--~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 272 SSSDSW--IPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp GGGTEE--EECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred CcCCce--eECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 976642 2221 111 1223456667899999998 44 47999999887644321 00000000112234
Q ss_pred CCEEEEEEcCC---------eEEEEECCCC
Q 006360 134 DWILTAGTSNG---------RVVFYDIRGK 154 (648)
Q Consensus 134 G~~Lasgs~DG---------~V~IWDl~s~ 154 (648)
+..++.|+.+| .|.+||..+.
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~ 379 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGS 379 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTT
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCc
Confidence 55555555443 4678888765
No 276
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.41 E-value=0.0046 Score=69.69 Aligned_cols=113 Identities=13% Similarity=0.102 Sum_probs=70.2
Q ss_pred CCEEEEEEC------CCcEEEEECCCCceeEEEeCCCCC-------------------------------------cEEE
Q 006360 6 DEHLASISL------SGDLILHNLASGAKAAELKDPNEQ-------------------------------------VLRV 42 (648)
Q Consensus 6 G~~Lasgs~------DG~V~IwDl~sg~~i~~l~~~~~~-------------------------------------~V~~ 42 (648)
+..|+++.. +|.|+.+|..+|+.+..+...... ....
T Consensus 160 ~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~ 239 (571)
T 2ad6_A 160 KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGW 239 (571)
T ss_dssp TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSC
T ss_pred CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeee
Confidence 345555654 789999999999998877642111 0012
Q ss_pred EEEccCCCeEEEEEeC------------C----CeEEEEECCCCCceeEEecc-CC--------CCeEEEEEccCCC---
Q 006360 43 LDYSRNSRHLLVTAGD------------D----GTLHLWDTTGRSPKVSWLKQ-HS--------APTAGISFSSDDK--- 94 (648)
Q Consensus 43 Vafspdg~~lLaSgs~------------D----g~V~IWDl~t~~~~v~~l~~-H~--------~~V~slafsPdg~--- 94 (648)
+++.++.. +++.+.. | +.|..+|.++++.+-+.-.. |. .++. +....+|+
T Consensus 240 ~a~d~~~g-~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~ 317 (571)
T 2ad6_A 240 YAYDPKLN-LFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTP 317 (571)
T ss_dssp CEEETTTT-EEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEE
T ss_pred EEEcCCCC-eEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEE
Confidence 45566555 4544442 1 36999999988854332222 21 1121 22224674
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeEee
Q 006360 95 IIASVGLDKKLYTYDPGSRRPSSCIT 120 (648)
Q Consensus 95 ~LaSgs~Dg~I~IWDl~tgk~v~~~~ 120 (648)
.++.++.+|.++++|..+|+.+..+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeec
Confidence 67788999999999999998776543
No 277
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.38 E-value=0.027 Score=56.91 Aligned_cols=142 Identities=15% Similarity=0.197 Sum_probs=93.7
Q ss_pred CcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe-ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCce-
Q 006360 38 QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL-KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP- 115 (648)
Q Consensus 38 ~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l-~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~- 115 (648)
..+..++|+|+++.++++...++.|...|.. ++. +..+ .........|++.+++.++++.-.++.+.++++.....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v-~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDL-IRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCE-EEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCE-EEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 4689999999887677778888999999998 442 3333 22235688999998888777766778899998765432
Q ss_pred --eeEee-------CCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCC--CCCceEEEee-----cCCCCCeeEEEEccCC
Q 006360 116 --SSCIT-------YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG--KPQPLTVLRA-----CSSSEAVSSLCWQRAK 179 (648)
Q Consensus 116 --v~~~~-------h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s--~~~~~~~l~~-----~~h~~~VtsLafspdg 179 (648)
+.... .......++|+|+++.|+++.+.....||.++. ....+.++.. ..+...+.+++++|..
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK 184 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence 22221 234468999999998888877765555555542 1112333321 1233457899999864
Q ss_pred Ce
Q 006360 180 PV 181 (648)
Q Consensus 180 ~~ 181 (648)
..
T Consensus 185 g~ 186 (255)
T 3qqz_A 185 NT 186 (255)
T ss_dssp TE
T ss_pred Ce
Confidence 33
No 278
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.32 E-value=0.011 Score=67.85 Aligned_cols=148 Identities=16% Similarity=0.049 Sum_probs=94.8
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEEeCCCCCc----------EEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE
Q 006360 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQV----------LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (648)
Q Consensus 6 G~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~----------V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~ 75 (648)
+..|++++.++.|+.+|..+|+.+.++....... ...+.+. +. .++.++.|+.|+.+|..+++..-.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GD-KVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BT-EEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--CC-EEEEEcCCCEEEEEECCCCCEeee
Confidence 5567778889999999999999998876422110 0112222 33 577788899999999998885433
Q ss_pred EeccCCCCeEEEEEcc--CCCEEEEEeC------CCeEEEEeCCCCceeeEeeCC--C----------------------
Q 006360 76 WLKQHSAPTAGISFSS--DDKIIASVGL------DKKLYTYDPGSRRPSSCITYE--A---------------------- 123 (648)
Q Consensus 76 ~l~~H~~~V~slafsP--dg~~LaSgs~------Dg~I~IWDl~tgk~v~~~~h~--~---------------------- 123 (648)
...........+...| .+..++.+.. ++.|+.+|..+|+.+-.+... .
T Consensus 143 ~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~ 222 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (668)
T ss_dssp EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred eccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccce
Confidence 2221111011111112 2344555443 589999999999987655311 0
Q ss_pred --------CeEEEEEeCCCCEEEEEEcCCe-------------------EEEEECCCCCC
Q 006360 124 --------PFSSLAFIDDDWILTAGTSNGR-------------------VVFYDIRGKPQ 156 (648)
Q Consensus 124 --------~I~slafsPdG~~Lasgs~DG~-------------------V~IWDl~s~~~ 156 (648)
....+++++++..++++..++. |+.+|.++++.
T Consensus 223 w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~ 282 (668)
T 1kv9_A 223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKL 282 (668)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE
T ss_pred eeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCce
Confidence 1124688888889998887763 99999998853
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.29 E-value=0.067 Score=62.62 Aligned_cols=152 Identities=11% Similarity=-0.040 Sum_probs=94.6
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCc---eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006360 2 YNCKDEHLASIS-LSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (648)
Q Consensus 2 FSpdG~~Lasgs-~DG~V~IwDl~sg~---~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l 77 (648)
|++.+..|+... ..+.|+.+++.... ....+..........|++.+.+++++++-...+.|.+.++.+... ...+
T Consensus 431 ~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~-~~l~ 509 (791)
T 3m0c_C 431 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLF 509 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEE
T ss_pred ecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE-EEEE
Confidence 344344443333 34556666664321 111222212233456888888876777877889999999987663 2233
Q ss_pred ccCCCCeEEEEEccCCCEEEEEe-CC-CeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECCC
Q 006360 78 KQHSAPTAGISFSSDDKIIASVG-LD-KKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRG 153 (648)
Q Consensus 78 ~~H~~~V~slafsPdg~~LaSgs-~D-g~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~s 153 (648)
.........|++.|.+.+|+... .+ +.|...++.......++. .......|++++.+..|+.+. ..+.|..+|+..
T Consensus 510 ~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 510 RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 34445689999999655555554 33 689999987554444443 346788999998777777665 456799999976
Q ss_pred C
Q 006360 154 K 154 (648)
Q Consensus 154 ~ 154 (648)
.
T Consensus 590 ~ 590 (791)
T 3m0c_C 590 G 590 (791)
T ss_dssp C
T ss_pred C
Confidence 5
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.23 E-value=0.061 Score=62.96 Aligned_cols=169 Identities=7% Similarity=-0.056 Sum_probs=106.7
Q ss_pred EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC---ceeEEeccCCCCe
Q 006360 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---PKVSWLKQHSAPT 84 (648)
Q Consensus 8 ~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~---~~v~~l~~H~~~V 84 (648)
+|+.+ ....|+..++........+. ....+..|+|.+....++++-...+.|+.+++.+.. .....+.......
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~~l~~--~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred ccccc-cccceeEeeccCCcceeeec--CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 34433 34568888876554443333 334566799998776577776777889999987531 1123334344567
Q ss_pred EEEEEccCC-CEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEEc-C-CeEEEEECCCCCCceEE
Q 006360 85 AGISFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTS-N-GRVVFYDIRGKPQPLTV 160 (648)
Q Consensus 85 ~slafsPdg-~~LaSgs~Dg~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs~-D-G~V~IWDl~s~~~~~~~ 160 (648)
..|++.+.+ +++++-...+.|.+.|+.......++. .......|+++|.+.+|+.... + +.|.+.++..... .+
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~--~~ 551 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YS 551 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE--EE
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce--EE
Confidence 889999866 455555667899999998655444443 4456889999998666666653 2 6799999886532 22
Q ss_pred EeecCCCCCeeEEEEccCCCeE
Q 006360 161 LRACSSSEAVSSLCWQRAKPVF 182 (648)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~L 182 (648)
+. ...-.....|++++.+..|
T Consensus 552 lv-~~~l~~P~GLavD~~~~~L 572 (791)
T 3m0c_C 552 LV-TENIQWPNGITLDLLSGRL 572 (791)
T ss_dssp EE-CSSCSCEEEEEEETTTTEE
T ss_pred EE-eCCCCCceEEEEecCCCeE
Confidence 22 1233568889998754433
No 281
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.21 E-value=0.011 Score=66.98 Aligned_cols=149 Identities=14% Similarity=0.048 Sum_probs=94.7
Q ss_pred CCEEEEEEC-CCcEEEEEC-CCCceeEEEeCCCCC----------cEEEEEEccCCC---eEEEEEeCCCeEEEEECCCC
Q 006360 6 DEHLASISL-SGDLILHNL-ASGAKAAELKDPNEQ----------VLRVLDYSRNSR---HLLVTAGDDGTLHLWDTTGR 70 (648)
Q Consensus 6 G~~Lasgs~-DG~V~IwDl-~sg~~i~~l~~~~~~----------~V~~Vafspdg~---~lLaSgs~Dg~V~IWDl~t~ 70 (648)
+..|++++. ++.|+-+|. .+|+.+.++...... ....+++.|.+. ..|+.++.|+.|+.+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 456777777 899999999 899999887642211 112345533333 12777888999999999988
Q ss_pred CceeEEecc-CC--CCeEE-EEEccCCCEEEEEe------CCCeEEEEeCCCCceeeEeeCCCCe---------------
Q 006360 71 SPKVSWLKQ-HS--APTAG-ISFSSDDKIIASVG------LDKKLYTYDPGSRRPSSCITYEAPF--------------- 125 (648)
Q Consensus 71 ~~~v~~l~~-H~--~~V~s-lafsPdg~~LaSgs------~Dg~I~IWDl~tgk~v~~~~h~~~I--------------- 125 (648)
+.+...-.. +. ..+.+ ..+. ++ .|++++ .++.|+.+|.++|+.+-.+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 854322111 10 01111 1111 34 455554 3899999999999987655422211
Q ss_pred ------------------------EEEEEeCCCCEEEEEEcCC----------------eEEEEECCCCCC
Q 006360 126 ------------------------SSLAFIDDDWILTAGTSNG----------------RVVFYDIRGKPQ 156 (648)
Q Consensus 126 ------------------------~slafsPdG~~Lasgs~DG----------------~V~IWDl~s~~~ 156 (648)
..+++.++..+|+.+..++ .|..+|.++++.
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~ 290 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEA 290 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCE
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCce
Confidence 1356777788888887663 799999998853
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.19 E-value=0.008 Score=65.19 Aligned_cols=139 Identities=13% Similarity=0.059 Sum_probs=87.5
Q ss_pred EEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCC-C----eEEEEeCCCC
Q 006360 40 LRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD-K----KLYTYDPGSR 113 (648)
Q Consensus 40 V~~Vafsp-dg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~D-g----~I~IWDl~tg 113 (648)
...|+|+| ++. .|+.+...+.|+.+|..+.. +..+.........|+|++++++|+.+... + .+.+++. .+
T Consensus 139 P~~lavdp~~~g-~Lyv~d~~~~I~~id~~~~~--v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 139 AVWLSFDPKNHN-HLYLVGEQHPTRLIDFEKEY--VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCEEEEETTEEE-EEEEEEBTEEEEEEETTTTE--EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCEEEECCCCCC-eEEEEeCCCcEEEEECCCCE--EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 35688997 344 35554555889999998765 33444455668999999999966666542 1 3444443 33
Q ss_pred cee--eEeeCCCCeEEEEEeC-CCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEE
Q 006360 114 RPS--SCITYEAPFSSLAFID-DDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFID 184 (648)
Q Consensus 114 k~v--~~~~h~~~I~slafsP-dG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las 184 (648)
... ..+........++++| +|.++++-..++.|+.||..+... ..+...........|+|+|+|++|..
T Consensus 215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~--~~~~~~~~~~~P~gia~~pdG~~lyv 286 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET--TPLFTIQDSGWEFHIQFHPSGNYAYI 286 (430)
T ss_dssp TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE--EEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE--EEEEEcCCCCcceeEEEcCCCCEEEE
Confidence 322 2333344567888999 677666666788999999986521 12221222345778999998775433
No 283
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.18 E-value=0.013 Score=61.29 Aligned_cols=156 Identities=11% Similarity=0.101 Sum_probs=102.1
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc----CC--CCeEEEEE---ccCCCEEEEEe------------
Q 006360 42 VLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ----HS--APTAGISF---SSDDKIIASVG------------ 100 (648)
Q Consensus 42 ~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~----H~--~~V~slaf---sPdg~~LaSgs------------ 100 (648)
+++|.+....++++.-..+.|..||..++......+.. .. ..+..|.| .|+++++++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 57898866645555558999999999755422222221 11 13589999 68877777544
Q ss_pred -CCCeEEEEeCC---CCceeeEeeC--------------CCCeEEEEEeCCCCEEEEEEcC-CeEEEEECCCCCCceEEE
Q 006360 101 -LDKKLYTYDPG---SRRPSSCITY--------------EAPFSSLAFIDDDWILTAGTSN-GRVVFYDIRGKPQPLTVL 161 (648)
Q Consensus 101 -~Dg~I~IWDl~---tgk~v~~~~h--------------~~~I~slafsPdG~~Lasgs~D-G~V~IWDl~s~~~~~~~l 161 (648)
.+..|..||+. +++.+..... ...+..++..++|+..++++.. +.|..++..........+
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~ 176 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAW 176 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEE
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeee
Confidence 26789999999 7877655531 1247899999999999999988 888888887652111111
Q ss_pred ee--cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 162 RA--CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 162 ~~--~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
.. .......+.|+++|+|..|+.. .+ ++.+..+|+.
T Consensus 177 ~~~~~~~~~G~nGIv~~pdg~~Liv~-----------~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 177 ESGNGGQRPGYSGITFDPHSNKLIAF-----------GG-PRALTAFDVS 214 (334)
T ss_dssp CCCCSSSCCSCSEEEEETTTTEEEEE-----------SS-SSSEEEEECS
T ss_pred cCCCcccccCcceEEEeCCCCEEEEE-----------cC-CCeEEEEcCC
Confidence 11 1112236789999987665444 23 6667777766
No 284
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.17 E-value=0.04 Score=64.06 Aligned_cols=171 Identities=12% Similarity=0.128 Sum_probs=110.9
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeC------CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 006360 5 KDEHLASISLSGDLILHNLASGAKAAELKD------PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (648)
Q Consensus 5 dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~------~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~ 78 (648)
+|. |-.|..++-|.+|+..++.. ..+.. .....|.+++...++. |..|..++-|..||..++.. ..+.
T Consensus 320 ~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~~--~~~~ 393 (795)
T 4a2l_A 320 QGG-MWLGTYFGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQRF--TSYT 393 (795)
T ss_dssp TSC-EEEEESSSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCCE--EEEC
T ss_pred CcC-EEEEECCCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCcE--EEEe
Confidence 344 34466666788888654432 22221 1245688888888776 66788887899999877652 2221
Q ss_pred -c--------CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee-----CCCCeEEEEEeCCCCEEEEEEcCC
Q 006360 79 -Q--------HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-----YEAPFSSLAFIDDDWILTAGTSNG 144 (648)
Q Consensus 79 -~--------H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~-----h~~~I~slafsPdG~~Lasgs~DG 144 (648)
. ....|.+++...++.+|..|+.++-|.+||..+++...... ....|.++...++|.+.+ |+.+|
T Consensus 394 ~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~~G 472 (795)
T 4a2l_A 394 LQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWL-GTLSA 472 (795)
T ss_dssp CC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE-EESSC
T ss_pred cCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE-EecCc
Confidence 1 23579999998888857778887789999998877544321 245789999888887554 45555
Q ss_pred eEEEEECCCCCCceEEEee-----cCCCCCeeEEEEccCCCeEEEe
Q 006360 145 RVVFYDIRGKPQPLTVLRA-----CSSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 145 ~V~IWDl~s~~~~~~~l~~-----~~h~~~VtsLafspdg~~Las~ 185 (648)
|.+||..+.. +..+.. .-....|.++...++|++.+..
T Consensus 473 -l~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 473 -LVRFNPEQRS--FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp -EEEEETTTTE--EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred -eeEEeCCCCe--EEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 8999987652 122211 0123678888888877655443
No 285
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.15 E-value=0.06 Score=62.55 Aligned_cols=172 Identities=11% Similarity=0.087 Sum_probs=111.5
Q ss_pred CCCCEEEEEECCCcEEEEECCCCceeEEEeC------CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 006360 4 CKDEHLASISLSGDLILHNLASGAKAAELKD------PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (648)
Q Consensus 4 pdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~------~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l 77 (648)
++|.+. .|..+ -|.+||..+++....... .....|.++...++|. |..|..++-|.+||...... ..+
T Consensus 272 ~~g~lW-igt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~--~~~ 345 (795)
T 4a2l_A 272 SQNRLW-IGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG--MWLGTYFGGLNYYHPIRNRF--KNI 345 (795)
T ss_dssp TTSCEE-EEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC--EEEEESSSCEEEECGGGGSS--EEE
T ss_pred CCCCEE-EEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC--EEEEECCCCeEEeCCCcccc--eEE
Confidence 345433 35455 488899766654332211 1235688898888886 67778878899998765542 222
Q ss_pred cc-------CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee---------CCCCeEEEEEeCCCCEEEEEE
Q 006360 78 KQ-------HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT---------YEAPFSSLAFIDDDWILTAGT 141 (648)
Q Consensus 78 ~~-------H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~---------h~~~I~slafsPdG~~Lasgs 141 (648)
.. ....|.+++...++.+ ..|+.++-|.+||..+++...... ....|.+++..++|..|.+|+
T Consensus 346 ~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt 424 (795)
T 4a2l_A 346 RNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT 424 (795)
T ss_dssp CCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE
T ss_pred cCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe
Confidence 11 2356999998887764 557777779999988776544321 135688999988888677788
Q ss_pred cCCeEEEEECCCCCCceEEEeec---CCCCCeeEEEEccCCCeEEE
Q 006360 142 SNGRVVFYDIRGKPQPLTVLRAC---SSSEAVSSLCWQRAKPVFID 184 (648)
Q Consensus 142 ~DG~V~IWDl~s~~~~~~~l~~~---~h~~~VtsLafspdg~~Las 184 (648)
.++-|.+||..+.. +..+... .....|.++...++|.+.+.
T Consensus 425 ~~~Gl~~~d~~~~~--~~~~~~~~~~l~~~~v~~i~~d~~g~lwig 468 (795)
T 4a2l_A 425 HAGGLSILHRNSGQ--VENFNQRNSQLVNENVYAILPDGEGNLWLG 468 (795)
T ss_dssp TTTEEEEEETTTCC--EEEECTTTSCCSCSCEEEEEECSSSCEEEE
T ss_pred CcCceeEEeCCCCc--EEEeecCCCCcCCCeeEEEEECCCCCEEEE
Confidence 87779999988753 2222210 12456888888776554433
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.12 E-value=0.022 Score=63.05 Aligned_cols=152 Identities=10% Similarity=0.097 Sum_probs=92.4
Q ss_pred CccC-CCCEEEEE-ECCCcEEEEECCCCceeEEEeCCC--CCcEEEEEE-------ccCCCeEEEEEeCCC------eEE
Q 006360 1 MYNC-KDEHLASI-SLSGDLILHNLASGAKAAELKDPN--EQVLRVLDY-------SRNSRHLLVTAGDDG------TLH 63 (648)
Q Consensus 1 AFSp-dG~~Lasg-s~DG~V~IwDl~sg~~i~~l~~~~--~~~V~~Vaf-------spdg~~lLaSgs~Dg------~V~ 63 (648)
+|+| ++..|+.+ ...+.|++.|++++.....+.... ......|+| ++++++++++-..++ .|.
T Consensus 145 a~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~ 224 (496)
T 3kya_A 145 AFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVY 224 (496)
T ss_dssp EEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEE
T ss_pred EEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEE
Confidence 3566 34444444 334678889986665554333211 234788999 999985555544432 366
Q ss_pred EEECCC-CCce----eEEeccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEeCC-------CCce-----------e-e-
Q 006360 64 LWDTTG-RSPK----VSWLKQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPG-------SRRP-----------S-S- 117 (648)
Q Consensus 64 IWDl~t-~~~~----v~~l~~H~~~V~slafsP-dg~~LaSgs~Dg~I~IWDl~-------tgk~-----------v-~- 117 (648)
+++... +... ...+... .....++++| ++.++++-..++.|+.+|+. ++.. . .
T Consensus 225 ~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l 303 (496)
T 3kya_A 225 IIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQL 303 (496)
T ss_dssp EEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEE
T ss_pred EEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccccccee
Confidence 666443 1110 0122221 2456788999 56666677788899999987 5543 1 1
Q ss_pred -EeeCCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECCC
Q 006360 118 -CITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRG 153 (648)
Q Consensus 118 -~~~h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~s 153 (648)
..........|+|+|+|++|+.+. ....|+.+|...
T Consensus 304 ~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 304 FTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp EECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 122345568999999999666554 567899877654
No 287
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.11 E-value=0.0067 Score=68.60 Aligned_cols=78 Identities=10% Similarity=0.053 Sum_probs=51.4
Q ss_pred CCeEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeE--EEEEeCCCCE
Q 006360 59 DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFS--SLAFIDDDWI 136 (648)
Q Consensus 59 Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~--slafsPdG~~ 136 (648)
+|.|+.||+.+++..-+. .+...+..-.....+.+++.++.|+.|+.||.++|+.+-.+.....+. -+.|..+|+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~--~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEH--KEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTCCEEEEE--EESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cceEEEEECCCCCEEEEe--cCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 578999999888743222 222222221222247788889999999999999999988776544443 2666667764
Q ss_pred EE
Q 006360 137 LT 138 (648)
Q Consensus 137 La 138 (648)
.+
T Consensus 543 Yv 544 (582)
T 1flg_A 543 YL 544 (582)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 288
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.07 E-value=0.16 Score=57.87 Aligned_cols=170 Identities=6% Similarity=-0.008 Sum_probs=109.1
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 2 FSpdG~~Lasgs-~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
|++++..|+.+. .++.|+.+++........+.. .......+++.+.+++++++-...+.|.+.++++.... ..+...
T Consensus 44 ~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~-g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~-~l~~~~ 121 (628)
T 4a0p_A 44 FDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF-GLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ-VLVWKD 121 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE-EEECSS
T ss_pred EECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC-CCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE-EEEeCC
Confidence 566655555443 457788888754333222322 22334568888777767777777889999999876532 223344
Q ss_pred CCCeEEEEEccCCCEEEEEe--CCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECCCCCCc
Q 006360 81 SAPTAGISFSSDDKIIASVG--LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQP 157 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs--~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~s~~~~ 157 (648)
-.....|++.|...+|+... ..+.|...++.................|++++++..|+.+. ..+.|..+|+.....
T Consensus 122 l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~- 200 (628)
T 4a0p_A 122 LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR- 200 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-
Confidence 45689999999555555544 25688888887655544455566788999999877777665 467899999987533
Q ss_pred eEEEeecCCCCCeeEEEEcc
Q 006360 158 LTVLRACSSSEAVSSLCWQR 177 (648)
Q Consensus 158 ~~~l~~~~h~~~VtsLafsp 177 (648)
+++. .......+|++..
T Consensus 201 -~v~~--~~l~~P~glav~~ 217 (628)
T 4a0p_A 201 -EVIA--DDLPHPFGLTQYQ 217 (628)
T ss_dssp -EEEE--ECCSCEEEEEEET
T ss_pred -EEee--ccCCCceEEEEEC
Confidence 3333 2233455777654
No 289
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.06 E-value=0.039 Score=57.14 Aligned_cols=150 Identities=15% Similarity=0.192 Sum_probs=84.3
Q ss_pred CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEE-EECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCe
Q 006360 26 GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHL-WDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKK 104 (648)
Q Consensus 26 g~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~I-WDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~ 104 (648)
|+.-..+.......+..+++.+++. +++.+ .++.++. +|-....- ...-......+..+.+.+++.++ .++.+|.
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~G~~~~S~d~gG~tW-~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~ 226 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPSGE-YVAVS-SRGSFYSTWEPGQTAW-EPHNRTTSRRLHNMGFTPDGRLW-MIVNGGK 226 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTTSC-EEEEE-TTSSEEEEECTTCSSC-EEEECCSSSCEEEEEECTTSCEE-EEETTTE
T ss_pred CCCCEEeecCCCcceEEEEEcCCCc-EEEEE-CCCcEEEEeCCCCCce-eECCCCCCCccceeEECCCCCEE-EEeCCce
Confidence 4444444433445678899999876 55554 4455544 44312221 11123455678999999888755 5566788
Q ss_pred EEEEeCCCCceeeEee-----CCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeec-CCCCCeeEEEEccC
Q 006360 105 LYTYDPGSRRPSSCIT-----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRAC-SSSEAVSSLCWQRA 178 (648)
Q Consensus 105 I~IWDl~tgk~v~~~~-----h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~-~h~~~VtsLafspd 178 (648)
+++++...++....+. ....+.++.+.+++.+++++. +|.| ++..+.+ .....+... .+...+.++.|.++
T Consensus 227 ~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG-~tW~~~~~~~~~~~~~~~v~~~~~ 303 (327)
T 2xbg_A 227 IAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGG-QTWQQDVDVKKVPSNFYKILFFSP 303 (327)
T ss_dssp EEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTT-SSCEECGGGTTSSSCCCEEEEEET
T ss_pred EEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCC-cccEEcCccCCCCCCeEEEEEECC
Confidence 8877533344322222 223588999998877666554 6766 4455544 223333311 23456788888654
Q ss_pred CCeE
Q 006360 179 KPVF 182 (648)
Q Consensus 179 g~~L 182 (648)
+.++
T Consensus 304 ~~~~ 307 (327)
T 2xbg_A 304 DQGF 307 (327)
T ss_dssp TEEE
T ss_pred CceE
Confidence 4333
No 290
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.98 E-value=0.086 Score=55.81 Aligned_cols=167 Identities=11% Similarity=0.091 Sum_probs=96.8
Q ss_pred CCCcEEEEECCC--Ccee-EEEeCC----CCCcEEEEEEcc--CCCeEEEEE-eC--CCeEEEEECCCCCce---eEEec
Q 006360 14 LSGDLILHNLAS--GAKA-AELKDP----NEQVLRVLDYSR--NSRHLLVTA-GD--DGTLHLWDTTGRSPK---VSWLK 78 (648)
Q Consensus 14 ~DG~V~IwDl~s--g~~i-~~l~~~----~~~~V~~Vafsp--dg~~lLaSg-s~--Dg~V~IWDl~t~~~~---v~~l~ 78 (648)
.+|.|.++|..+ ++.. ..+.+. ..-....+.+.+ ++...|+.+ .. +..|.||+++..... +..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 689999999873 2221 123221 123556677765 454334444 33 467888887543222 22222
Q ss_pred cC-CCCeEEEEEccCCCEEEEEe-----------------CCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEE
Q 006360 79 QH-SAPTAGISFSSDDKIIASVG-----------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAG 140 (648)
Q Consensus 79 ~H-~~~V~slafsPdg~~LaSgs-----------------~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasg 140 (648)
+. -...+++.+.++|.++++.. ..|.|+.||.. ++......-...+.++|+||++.|+++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEE
Confidence 22 24578999999998777654 12567777763 433334445567899999999888776
Q ss_pred E-cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEcc-CCCeEE
Q 006360 141 T-SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR-AKPVFI 183 (648)
Q Consensus 141 s-~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafsp-dg~~La 183 (648)
. ..+.|+.||+...... ...+.+...+..-.++++. +|++.+
T Consensus 239 dt~~~~I~~~~~~~~g~l-~~~~~~~~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 239 ELLAHKIHVYEKHANWTL-TPLRVLSFDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp EGGGTEEEEEEECTTSCE-EEEEEEECSSEEEEEEECTTTCCEEE
T ss_pred eCCCCeEEEEEECCCCcE-ecCEEEeCCCCCceEEEeCCCCcEEE
Confidence 5 5688999999743221 1111111234556677776 355444
No 291
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.97 E-value=0.15 Score=57.99 Aligned_cols=171 Identities=10% Similarity=-0.002 Sum_probs=111.6
Q ss_pred CEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEE
Q 006360 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAG 86 (648)
Q Consensus 7 ~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~s 86 (648)
.+|+.+ ....|+..++........+....-.....|+|.+.+..++++-..++.|+.+++.+... ...+.........
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v~~~g~~~P~G 84 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHVVEFGLDYPEG 84 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCE
T ss_pred cEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEEEeCCCCCcce
Confidence 355554 55789999997655433333222345677999998776777777789999999987653 2333333345788
Q ss_pred EEEccC-CCEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEc--CCeEEEEECCCCCCceEEEe
Q 006360 87 ISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTS--NGRVVFYDIRGKPQPLTVLR 162 (648)
Q Consensus 87 lafsPd-g~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~--DG~V~IWDl~s~~~~~~~l~ 162 (648)
+++.+. ++++++-...+.|.+.|+........+ ........|+++|...+|+.... .+.|...++..... ..+.
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~--~~l~ 162 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER--TTLV 162 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EEEE
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce--EEEE
Confidence 999875 445555556779999998765433333 34456789999996666666553 56788888876532 2222
Q ss_pred ecCCCCCeeEEEEccCCCeEE
Q 006360 163 ACSSSEAVSSLCWQRAKPVFI 183 (648)
Q Consensus 163 ~~~h~~~VtsLafspdg~~La 183 (648)
........|++++++..|.
T Consensus 163 --~~~~~P~GlalD~~~~~LY 181 (628)
T 4a0p_A 163 --PNVGRANGLTIDYAKRRLY 181 (628)
T ss_dssp --CSCSSEEEEEEETTTTEEE
T ss_pred --CCCCCcceEEEccccCEEE
Confidence 2345678888888654443
No 292
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=96.93 E-value=0.00093 Score=44.80 Aligned_cols=29 Identities=24% Similarity=0.344 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|+++.+++++|+.|++.|..|+.|||.+|
T Consensus 3 MnQLE~kVEeLl~~n~~Le~eV~rLk~ll 31 (34)
T 2oxj_A 3 MXQLEXKVXELLXKNXHLEXEVXRLKXLV 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 78889999999999999999999999875
No 293
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.91 E-value=0.14 Score=58.16 Aligned_cols=171 Identities=8% Similarity=-0.009 Sum_probs=102.4
Q ss_pred EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEE
Q 006360 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGI 87 (648)
Q Consensus 8 ~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~sl 87 (648)
+|+-+ ....|++.|+........+..........|+|++.++.++++=...+.|+.+++.+.......+...-.....+
T Consensus 11 ~~~~~-~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~Gl 89 (619)
T 3s94_A 11 LLLYA-NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 89 (619)
T ss_dssp CEEEE-CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEE
T ss_pred eEEEe-ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeE
Confidence 34433 45789999986543111222113344667999997775666655678899999876532123333333568999
Q ss_pred EEccCC-CEEEEEeCCCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEEc--CCeEEEEECCCCCCceEEEee
Q 006360 88 SFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTS--NGRVVFYDIRGKPQPLTVLRA 163 (648)
Q Consensus 88 afsPdg-~~LaSgs~Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs~--DG~V~IWDl~s~~~~~~~l~~ 163 (648)
++.+.+ +++++-...+.|.+.|+........+ ........|+++|.+.+|+.... .+.|...++..... ..++.
T Consensus 90 AvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~-~~l~~- 167 (619)
T 3s94_A 90 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIIN- 167 (619)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEEC-
T ss_pred EEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-EEEEe-
Confidence 999854 45555566789999998765443333 34456788999997666666653 46788888876532 22222
Q ss_pred cCCCCCeeEEEEccCCCeE
Q 006360 164 CSSSEAVSSLCWQRAKPVF 182 (648)
Q Consensus 164 ~~h~~~VtsLafspdg~~L 182 (648)
..-.....|++++++..|
T Consensus 168 -~~~~~P~Glald~~~~~L 185 (619)
T 3s94_A 168 -SEIYWPNGLTLDYEEQKL 185 (619)
T ss_dssp -SSCSSEEEEEEETTTTEE
T ss_pred -CCCCCCcEEEEEccCCEE
Confidence 234567889998864443
No 294
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.90 E-value=0.025 Score=61.41 Aligned_cols=150 Identities=8% Similarity=-0.071 Sum_probs=92.4
Q ss_pred ccC-CCCEEEEEECCCcEEEEECCCCceeEEE-eCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC--CCce-eEE
Q 006360 2 YNC-KDEHLASISLSGDLILHNLASGAKAAEL-KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG--RSPK-VSW 76 (648)
Q Consensus 2 FSp-dG~~Lasgs~DG~V~IwDl~sg~~i~~l-~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t--~~~~-v~~ 76 (648)
+++ +|.++++-..++.|+.+|..++.....+ .......-..++|+++++.++++-...+.|+.+|... +... ...
T Consensus 235 vd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~ 314 (433)
T 4hw6_A 235 VHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYI 314 (433)
T ss_dssp ECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEE
T ss_pred EeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEE
Confidence 566 5655555556678999998767663333 2212223346999999986666666778999988753 2110 111
Q ss_pred eccC---------------CCCeEEEEE---------ccCCCEEEEEeCCCeEEEEeCCCCceeeEeeC-----------
Q 006360 77 LKQH---------------SAPTAGISF---------SSDDKIIASVGLDKKLYTYDPGSRRPSSCITY----------- 121 (648)
Q Consensus 77 l~~H---------------~~~V~slaf---------sPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h----------- 121 (648)
+.+. -.....+++ ..++.++++-...+.|+.+|. ++......+.
T Consensus 315 ~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG 393 (433)
T 4hw6_A 315 VCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDG 393 (433)
T ss_dssp EEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCE
T ss_pred EEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCC
Confidence 1111 123677999 667777777777789999985 5554433321
Q ss_pred -------CCCeEEEEEe-CCCCEEEEEEcCCeEEEEECC
Q 006360 122 -------EAPFSSLAFI-DDDWILTAGTSNGRVVFYDIR 152 (648)
Q Consensus 122 -------~~~I~slafs-PdG~~Lasgs~DG~V~IWDl~ 152 (648)
-.....|+++ ++|.++++=..++.|+.+++.
T Consensus 394 ~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 394 ELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp ETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 1235688888 566555555566778887764
No 295
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.81 E-value=0.066 Score=62.03 Aligned_cols=163 Identities=12% Similarity=0.035 Sum_probs=100.1
Q ss_pred EEEEECCCcEEEEECCCCceeEEEe---CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec---cCCC
Q 006360 9 LASISLSGDLILHNLASGAKAAELK---DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK---QHSA 82 (648)
Q Consensus 9 Lasgs~DG~V~IwDl~sg~~i~~l~---~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~---~H~~ 82 (648)
|-.|..++-|.+||..++.... +. ......|.++...+++. |..|..++-|..||..++. ...+. ....
T Consensus 376 lWigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~ 450 (781)
T 3v9f_A 376 LWIGTDGGGINVFENGKRVAIY-NKENRELLSNSVLCSLKDSEGN--LWFGTYLGNISYYNTRLKK--FQIIELEKNELL 450 (781)
T ss_dssp EEEEEBSSCEEEEETTEEEEEC-C-----CCCSBEEEEEECTTSC--EEEEETTEEEEEECSSSCE--EEECCSTTTCCC
T ss_pred EEEEeCCCcEEEEECCCCeEEE-ccCCCCCCCcceEEEEECCCCC--EEEEeccCCEEEEcCCCCc--EEEeccCCCCCC
Confidence 4446655668888875443221 11 12346788888877776 5667777779999987665 33332 1346
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeC------CCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCC
Q 006360 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY------EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (648)
Q Consensus 83 ~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h------~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~ 156 (648)
.|.++...+++.+. .|+. +-|.+||..+++....... ...|.++...++|.+.+ |+.++-|..||..+..
T Consensus 451 ~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~- 526 (781)
T 3v9f_A 451 DVRVFYEDKNKKIW-IGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQL- 526 (781)
T ss_dssp CEEEEEECTTSEEE-EEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCE-
T ss_pred eEEEEEECCCCCEE-EEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCe-
Confidence 79999888777644 4555 5589999887765443321 35789999988887554 5553348889887652
Q ss_pred ceEEEeec--CCCCCeeEEEEccCCCe
Q 006360 157 PLTVLRAC--SSSEAVSSLCWQRAKPV 181 (648)
Q Consensus 157 ~~~~l~~~--~h~~~VtsLafspdg~~ 181 (648)
+..+... -....|.++...++|.+
T Consensus 527 -~~~~~~~~~l~~~~i~~i~~d~~g~l 552 (781)
T 3v9f_A 527 -VRKFNQYEGFCSNTINQIYRSSKGQM 552 (781)
T ss_dssp -EEEECTTTTCSCSCEEEEEECTTSCE
T ss_pred -EEEccCCCCCCCCeeEEEEECCCCCE
Confidence 2222210 11345777777665443
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.78 E-value=0.035 Score=61.37 Aligned_cols=141 Identities=11% Similarity=0.053 Sum_probs=86.8
Q ss_pred EEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCCceeEEeccC----CCCeEEEEE-------ccCCCEEEEEeCCC----
Q 006360 40 LRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH----SAPTAGISF-------SSDDKIIASVGLDK---- 103 (648)
Q Consensus 40 V~~Vafsp-dg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H----~~~V~slaf-------sPdg~~LaSgs~Dg---- 103 (648)
...|+|.| ++.+++++....+.|++.|..++.. ..+..- ......|+| ++++.+|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v--~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRML--SSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEE--EEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEE--EEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 45789998 3554566555557788899888763 333221 234899999 99998666665543
Q ss_pred ---eEEEEeCCC-Ccee-----eEeeCCCCeEEEEEeCC-CCEEEEEEcCCeEEEEECC-------CCCC-----c----
Q 006360 104 ---KLYTYDPGS-RRPS-----SCITYEAPFSSLAFIDD-DWILTAGTSNGRVVFYDIR-------GKPQ-----P---- 157 (648)
Q Consensus 104 ---~I~IWDl~t-gk~v-----~~~~h~~~I~slafsPd-G~~Lasgs~DG~V~IWDl~-------s~~~-----~---- 157 (648)
.|.+++... +... ..+........++++|+ +.++++-..++.|+.||+. ++.. +
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 367776443 2321 22322234567888995 5555556678889999997 4432 0
Q ss_pred -eEEEeecCCCCCeeEEEEccCCCeE
Q 006360 158 -LTVLRACSSSEAVSSLCWQRAKPVF 182 (648)
Q Consensus 158 -~~~l~~~~h~~~VtsLafspdg~~L 182 (648)
...+-........+.|+|+|+|++|
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~l 324 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYA 324 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEE
Confidence 1222222334556899999987754
No 297
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.77 E-value=0.11 Score=60.24 Aligned_cols=171 Identities=10% Similarity=0.088 Sum_probs=105.2
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEe--CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC--
Q 006360 5 KDEHLASISLSGDLILHNLASGAKAAELK--DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH-- 80 (648)
Q Consensus 5 dG~~Lasgs~DG~V~IwDl~sg~~i~~l~--~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H-- 80 (648)
+|+ |..|..++-|.+||..+++.. .+. ......|.++...+++. |..|.. +-|.+||..+.... ......
T Consensus 417 ~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~--lwigt~-~Gl~~~~~~~~~~~-~~~~~~~~ 490 (781)
T 3v9f_A 417 EGN-LWFGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKK--IWIGTH-AGVFVIDLASKKVI-HHYDTSNS 490 (781)
T ss_dssp TSC-EEEEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSE--EEEEET-TEEEEEESSSSSCC-EEECTTTS
T ss_pred CCC-EEEEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCC--EEEEEC-CceEEEeCCCCeEE-ecccCccc
Confidence 444 334666667888887665443 332 12345788888777775 555566 56889998776532 221111
Q ss_pred ---CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee----CCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCC
Q 006360 81 ---SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (648)
Q Consensus 81 ---~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~----h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s 153 (648)
...|.++...+++.+.+ |+.++-|..||..+++...... ....|.++...++|.+. .++.+|.|..||..+
T Consensus 491 ~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-i~T~~Glv~~~d~~~ 568 (781)
T 3v9f_A 491 QLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMW-LATGEGLVCFPSARN 568 (781)
T ss_dssp SCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEE-EEETTEEEEESCTTT
T ss_pred ccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEE-EEECCCceEEECCCC
Confidence 35799999988887655 4543447889987765443321 23568899988888754 455577658999876
Q ss_pred CCCceEEEeec-C-CCCCeeEEEEccCCCeEEEe
Q 006360 154 KPQPLTVLRAC-S-SSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 154 ~~~~~~~l~~~-~-h~~~VtsLafspdg~~Las~ 185 (648)
.. +..+... + ....|.++...++|++.++.
T Consensus 569 ~~--~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 569 FD--YQVFQRKEGLPNTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp CC--CEEECGGGTCSCCCCCEEEECSSSCEEEEC
T ss_pred Cc--EEEccccCCCCCceEEEEEECCCCCEEEEc
Confidence 53 2333211 1 12457788888776655443
No 298
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=96.77 E-value=0.0013 Score=43.94 Aligned_cols=29 Identities=24% Similarity=0.375 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|+++.+++++|+.|+..|+.|..|||.+|
T Consensus 2 M~QLE~kVEeLl~~n~~Le~EV~RLk~Ll 30 (33)
T 3m48_A 2 MAQLEAKVEELLSKNWNLENEVARLKKLV 30 (33)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 67889999999999999999999999886
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.73 E-value=0.0049 Score=71.28 Aligned_cols=151 Identities=10% Similarity=-0.037 Sum_probs=88.7
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCC----CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 006360 2 YNCKDEHLASIS-LSGDLILHNLAS----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (648)
Q Consensus 2 FSpdG~~Lasgs-~DG~V~IwDl~s----g~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~ 76 (648)
|++++..|+.+. ..+.|+.+++.. ......+.. .......|++.+.+++++++-...+.|.++++.+... ...
T Consensus 413 ~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~-~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~-~~l 490 (699)
T 1n7d_A 413 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTL 490 (699)
T ss_dssp EETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS-CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCE-EEE
T ss_pred cccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC-CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCce-EEE
Confidence 555555555553 346788888754 121111111 1112345777765555666656678899999887652 222
Q ss_pred eccCCCCeEEEEEccCCCEEEEEe-CC-CeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECC
Q 006360 77 LKQHSAPTAGISFSSDDKIIASVG-LD-KKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIR 152 (648)
Q Consensus 77 l~~H~~~V~slafsPdg~~LaSgs-~D-g~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~ 152 (648)
+.........|++.|.+.+|+... .. +.|..+++.......++ ........|+|++++..|+.+. ..+.|.++|+.
T Consensus 491 ~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 491 FREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp CCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred EeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 333334568899999555444443 22 67888887643322222 2234567899999766555554 56789999997
Q ss_pred CC
Q 006360 153 GK 154 (648)
Q Consensus 153 s~ 154 (648)
..
T Consensus 571 G~ 572 (699)
T 1n7d_A 571 GG 572 (699)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 300
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.54 E-value=0.083 Score=64.43 Aligned_cols=179 Identities=8% Similarity=0.059 Sum_probs=112.3
Q ss_pred CcEEEEECCCCceeEEEeCCCCCcEEEEE---EccCCCeEEEEEe----------CCCeEEEEECCCCCceeEEeccCCC
Q 006360 16 GDLILHNLASGAKAAELKDPNEQVLRVLD---YSRNSRHLLVTAG----------DDGTLHLWDTTGRSPKVSWLKQHSA 82 (648)
Q Consensus 16 G~V~IwDl~sg~~i~~l~~~~~~~V~~Va---fspdg~~lLaSgs----------~Dg~V~IWDl~t~~~~v~~l~~H~~ 82 (648)
+.|++.|..+.+.+..+.-...+.+.+++ |..+.+.+|+.|. ..|.|++|++...+.........++
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 46899998888888877765666666665 3333344777765 3478999999755433333345568
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeE-eeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEE
Q 006360 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC-ITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVL 161 (648)
Q Consensus 83 ~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~-~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l 161 (648)
.|++++-- +|++++.. ..+|++||+...+.+.. ..+...|..+...-.+++|++|..-..|.++..+.....+..+
T Consensus 887 ~v~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~ 963 (1158)
T 3ei3_A 887 AVYSMVEF-NGKLLASI--NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEI 963 (1158)
T ss_dssp CEEEEEEE-TTEEEEEE--TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEE
T ss_pred cCEEEeee-CCEEEEEc--CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEE
Confidence 89888744 46544433 46899999987654442 1222223333333357899999987778776655443444555
Q ss_pred eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCC
Q 006360 162 RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (648)
Q Consensus 162 ~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~ 210 (648)
....+...++++.|-.++ .++.+..++.+.+....+
T Consensus 964 a~D~~~~~vta~~~ld~~-------------t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 964 ARDFNPNWMSAVEILDDD-------------NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EECCSCBCEEEEEEEETT-------------EEEEEETTSEEEEEEECT
T ss_pred EeecccccEEEEEEEccC-------------cEEEEcCCCcEEEEecCC
Confidence 545566778888876432 344455677777665443
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.53 E-value=0.35 Score=54.86 Aligned_cols=152 Identities=8% Similarity=-0.033 Sum_probs=96.2
Q ss_pred ccCCCCEEEEEEC-CCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 006360 2 YNCKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (648)
Q Consensus 2 FSpdG~~Lasgs~-DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H 80 (648)
|++.+..|+.+.. .+.|..+++........+....-.....+++.+.+++++++-...+.|.+.++++.... ..+...
T Consensus 47 ~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~-~l~~~~ 125 (619)
T 3s94_A 47 FVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VLFWQE 125 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECSS
T ss_pred EEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE-EEEeCC
Confidence 5665666655544 45677777654322222222122456789999877767777777899999999876532 223344
Q ss_pred CCCeEEEEEccCCCEEEEEeC--CCeEEEEeCCCCceeeEe-eCCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECCCC
Q 006360 81 SAPTAGISFSSDDKIIASVGL--DKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGK 154 (648)
Q Consensus 81 ~~~V~slafsPdg~~LaSgs~--Dg~I~IWDl~tgk~v~~~-~h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~s~ 154 (648)
-.....|++.|.+.+|+.... .+.|...++......... ........|++++++..|+.+. ..+.|..+|+...
T Consensus 126 l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 126 LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp CSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC
T ss_pred CCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC
Confidence 456789999996555555443 467777787654433333 2445678999999766666655 4567999998764
No 302
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.49 E-value=0.004 Score=71.97 Aligned_cols=179 Identities=7% Similarity=-0.058 Sum_probs=105.0
Q ss_pred CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC----CCceeEEeccCCCCeEEEEE
Q 006360 14 LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG----RSPKVSWLKQHSAPTAGISF 89 (648)
Q Consensus 14 ~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t----~~~~v~~l~~H~~~V~slaf 89 (648)
..+.|++.++...+....+.. ...+..|+|.+.+..++++-...+.|+.+++.+ ... ...+.........|++
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~--~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~-~~~i~~~~~~P~glav 460 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQAPDGLAV 460 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCC--CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCC-CCBCCSCC--CCCEEC
T ss_pred CccceEEEeCCCCcceeeecc--CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcce-EEEEeCCCCCcceEEE
Confidence 345688888766554433332 234456899987775666655678899999875 221 1222222234567888
Q ss_pred cc-CCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEEc-C-CeEEEEECCCCCCceEEEeecC
Q 006360 90 SS-DDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTS-N-GRVVFYDIRGKPQPLTVLRACS 165 (648)
Q Consensus 90 sP-dg~~LaSgs~Dg~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs~-D-G~V~IWDl~s~~~~~~~l~~~~ 165 (648)
.+ .++++++-...+.|.++|+.......++. .......|+++|++.+|+.... . +.|.++++..... .++.. .
T Consensus 461 D~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~--~~l~~-~ 537 (699)
T 1n7d_A 461 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YSLVT-E 537 (699)
T ss_dssp CCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC--CEESC-S
T ss_pred EeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe--eEEEe-C
Confidence 86 45555555567789999987655444443 2345678899997655555443 2 6788888875422 22211 1
Q ss_pred CCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 166 SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 166 h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
.-.....|+|++++.. ++++-...+.|.++|+.
T Consensus 538 ~l~~PnGlavd~~~~~-----------LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 538 NIQWPNGITLDLLSGR-----------LYWVDSKLHSISSIDVN 570 (699)
T ss_dssp SCSSCCCEEECTTTCC-----------EEEEETTTTEEEEECSS
T ss_pred CCCCccEEEEeccCCE-----------EEEEecCCCeEEEEccC
Confidence 2344667899886433 34444445677777764
No 303
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.32 E-value=0.21 Score=54.07 Aligned_cols=141 Identities=13% Similarity=0.116 Sum_probs=94.0
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEEeCCC---CCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC----------
Q 006360 5 KDEHLASISLSGDLILHNLASGAKAAELKDPN---EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---------- 71 (648)
Q Consensus 5 dG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~---~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~---------- 71 (648)
+|..|+.+ .++.||.-++......+.+...+ ...|..+..+|+|. +||.. .+..|.|-.+..+.
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGD-LLCLF-NDNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSS-EEEEE-CSSEEEEEECCTTCSCCCCHHHHH
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCC-EEEEe-cCCeEEEEEecCccccCccccccc
Confidence 44555444 34678877876555555555432 22466789999998 66665 45789998885221
Q ss_pred -ceeEEecc------CCCCeEEEEEcc---CCCEEEEEeCCCeEEEEeCCCCc--eeeEe-------e---CCCCeEEEE
Q 006360 72 -PKVSWLKQ------HSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGSRR--PSSCI-------T---YEAPFSSLA 129 (648)
Q Consensus 72 -~~v~~l~~------H~~~V~slafsP---dg~~LaSgs~Dg~I~IWDl~tgk--~v~~~-------~---h~~~I~sla 129 (648)
.....+.- ....|..+.|+| .+..|++-..|++|++||+.... +. .+ + ....|.+++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence 11112211 246799999999 56789999999999999998632 22 22 1 235688999
Q ss_pred EeCCCCEEEEEE--cCCeEEEE
Q 006360 130 FIDDDWILTAGT--SNGRVVFY 149 (648)
Q Consensus 130 fsPdG~~Lasgs--~DG~V~IW 149 (648)
|..++-.|++.. .+|.|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 999888788766 77887654
No 304
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=96.30 E-value=0.0045 Score=41.23 Aligned_cols=29 Identities=17% Similarity=0.228 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|+++.+++++|+.|+..|..|..|||.+|
T Consensus 2 MnQLEdKvEeLl~~~~~Le~EV~RLk~lL 30 (33)
T 3c3g_A 2 MKXIEXKLXEIXSKXYHXENXLARIKXLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 78889999999999999999999999875
No 305
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.30 E-value=0.18 Score=51.95 Aligned_cols=176 Identities=13% Similarity=0.073 Sum_probs=101.8
Q ss_pred ccCCCCEEEEEECC--------------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEE---eCCCeEEE
Q 006360 2 YNCKDEHLASISLS--------------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTA---GDDGTLHL 64 (648)
Q Consensus 2 FSpdG~~Lasgs~D--------------G~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSg---s~Dg~V~I 64 (648)
|+++|++|+.+... ..|+..++..++. ..+.. ... ..|+++++.++++- ..+..|+.
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~-~~l~~---~~~--~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS-TVLDP---DPC--IYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC-EEEEC---SCE--EEEEEETTEEEEEEESSSSCEEEEE
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc-eEeec---CCc--cEEEEeCCEEEEEeecCCCCceEEE
Confidence 56788888776543 3577777755443 33332 121 35777888555554 23455666
Q ss_pred EECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeC-CCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEcC
Q 006360 65 WDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGL-DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSN 143 (648)
Q Consensus 65 WDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~-Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~D 143 (648)
.++.+.. ...+..+.. ..|+++++.|+-.+. ...|+..++..+....++. +... ..+.|++.+|+-...+
T Consensus 134 ~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 134 IRIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp EETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGG
T ss_pred EECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcC
Confidence 6776554 234444433 345677888876665 5689999988766544433 2332 3466988888877654
Q ss_pred --CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCC
Q 006360 144 --GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD 201 (648)
Q Consensus 144 --G~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~ 201 (648)
..|..-++.+.. ..++. ...+ ..|+|++.+|..+.... ...|.....||
T Consensus 205 ~~~~I~~~~ldG~~--~~~Lt----~~~~--~~~~~~g~~Iy~~~~~~-~~~i~~~~~DG 255 (302)
T 3s25_A 205 RDNAIVHVNINNPN--PVVLT----EANI--EHYNVYGSLIFYQRGGD-NPALCVVKNDG 255 (302)
T ss_dssp GTTEEEEECSSSCC--CEECS----CSCE--EEEEEETTEEEEEECSS-SCEEEEEETTS
T ss_pred CCcEEEEEECCCCC--eEEEe----CCCc--ceEEECCCEEEEEECCC-CcEEEEEECCC
Confidence 357777777653 23333 1233 34788888776542222 23444444444
No 306
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.25 E-value=0.24 Score=52.24 Aligned_cols=138 Identities=15% Similarity=0.269 Sum_probs=91.2
Q ss_pred CCcEEEEEC--CCCceeEEEeCC-----CC-CcEEEEEE--ccC-CCeEEEEEeCCCeEEEEECC---CCC---ceeEEe
Q 006360 15 SGDLILHNL--ASGAKAAELKDP-----NE-QVLRVLDY--SRN-SRHLLVTAGDDGTLHLWDTT---GRS---PKVSWL 77 (648)
Q Consensus 15 DG~V~IwDl--~sg~~i~~l~~~-----~~-~~V~~Vaf--spd-g~~lLaSgs~Dg~V~IWDl~---t~~---~~v~~l 77 (648)
+++|.+|++ .++ .+..+... .. ..+..+|+ ++. ++.+++....+|.+..|++. .+. ..++.+
T Consensus 98 ~n~l~vf~iDp~~~-~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNG-TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTC-CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCC-ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 478999976 333 34444221 11 44556777 664 44467777888999999983 221 123343
Q ss_pred ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCC-----CCceeeEee---CCCCeEEEEEe--CCCC-EEEEEE-cCCe
Q 006360 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPG-----SRRPSSCIT---YEAPFSSLAFI--DDDW-ILTAGT-SNGR 145 (648)
Q Consensus 78 ~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~-----tgk~v~~~~---h~~~I~slafs--PdG~-~Lasgs-~DG~ 145 (648)
. ....+..|...+....|+.+-+|.-|+.||.+ +++.+..+. ....+..|++- +++. +|++.+ .+..
T Consensus 177 ~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 177 K-MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp E-CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred c-CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 3 34578899999988899999999888888865 344555553 23578888884 5555 666666 5779
Q ss_pred EEEEECCCC
Q 006360 146 VVFYDIRGK 154 (648)
Q Consensus 146 V~IWDl~s~ 154 (648)
+.|||....
T Consensus 256 ~~Vydr~~~ 264 (355)
T 3amr_A 256 YAIYDRQGK 264 (355)
T ss_dssp EEEEESSTT
T ss_pred EEEEECCCC
Confidence 999999743
No 307
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=96.24 E-value=0.005 Score=41.22 Aligned_cols=29 Identities=17% Similarity=0.346 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|+++.+++++|..|+..|..|..|||.+|
T Consensus 3 MnQLEdKVEeLl~~~~~Le~EV~RLk~ll 31 (34)
T 3c3f_A 3 MXQIEXKLEXILSXLYHXENEXARIXKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 78889999999999999999999999875
No 308
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.24 E-value=0.18 Score=52.74 Aligned_cols=181 Identities=13% Similarity=0.161 Sum_probs=94.0
Q ss_pred CccCC---CCEEEEEEC-C-----CcEEEEECCCCc-----ee-EEEe--CCCCCcEEEEEEccCCCeEEEEEeC-----
Q 006360 1 MYNCK---DEHLASISL-S-----GDLILHNLASGA-----KA-AELK--DPNEQVLRVLDYSRNSRHLLVTAGD----- 58 (648)
Q Consensus 1 AFSpd---G~~Lasgs~-D-----G~V~IwDl~sg~-----~i-~~l~--~~~~~~V~~Vafspdg~~lLaSgs~----- 58 (648)
||+|+ +..|+++.. . +.|..|+...+. .+ ..+. .........++|.|+|. ++++.+.
T Consensus 81 a~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~ 159 (352)
T 2ism_A 81 ALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERE 159 (352)
T ss_dssp EECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGG
T ss_pred EECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCc
Confidence 46776 445544432 2 578888876432 11 1233 11111234689999996 5555332
Q ss_pred --------CCeEEEEECCCC-------------CceeEEeccCCCCeEEEEEcc-CCCEEEEEeCCCe--------EEEE
Q 006360 59 --------DGTLHLWDTTGR-------------SPKVSWLKQHSAPTAGISFSS-DDKIIASVGLDKK--------LYTY 108 (648)
Q Consensus 59 --------Dg~V~IWDl~t~-------------~~~v~~l~~H~~~V~slafsP-dg~~LaSgs~Dg~--------I~IW 108 (648)
.+.|.-+|.++. .. .....+|.. ...++|+| ++.++++-..... |.+.
T Consensus 160 ~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~-~i~a~G~rn-p~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i 237 (352)
T 2ism_A 160 LAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARP-EVYSLGHRN-PQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLI 237 (352)
T ss_dssp GGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCT-TEEEECCSE-ECCCEECTTTCCEEEEEECC------CCCEEEEE
T ss_pred cccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCc-cEEEEcCCC-cccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEe
Confidence 256666666541 11 122334433 67899999 6666555433332 3333
Q ss_pred eCCC----------------CceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCce---EEEeecCCCCC
Q 006360 109 DPGS----------------RRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL---TVLRACSSSEA 169 (648)
Q Consensus 109 Dl~t----------------gk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~---~~l~~~~h~~~ 169 (648)
.... ..++..+.+......++| .+|.++++....+.|...++....... ...........
T Consensus 238 ~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~r 316 (352)
T 2ism_A 238 VPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGR 316 (352)
T ss_dssp CTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCC
T ss_pred ccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCC
Confidence 2211 011222222334567777 466666665566778888876543211 01111122367
Q ss_pred eeEEEEccCCCeEEEe
Q 006360 170 VSSLCWQRAKPVFIDE 185 (648)
Q Consensus 170 VtsLafspdg~~Las~ 185 (648)
+..|++.|||.+.++.
T Consensus 317 p~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 317 LREVQVGPDGALYVTT 332 (352)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred eeEEEECCCCcEEEEE
Confidence 8999999988665554
No 309
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.21 E-value=0.12 Score=53.29 Aligned_cols=143 Identities=11% Similarity=0.066 Sum_probs=84.1
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec---
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK--- 78 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~--- 78 (648)
|.+++.+++.+ .+|.|+.-+-..++.-..+.......+..+.+.+++. ++.++.+|.+++++.+.+.. ...+.
T Consensus 170 ~~~~~~~~~~g-~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~--~~~~~~~G~~~~s~~D~G~t-W~~~~~~~ 245 (327)
T 2xbg_A 170 RSPSGEYVAVS-SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR--LWMIVNGGKIAFSDPDNSEN-WGELLSPL 245 (327)
T ss_dssp ECTTSCEEEEE-TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC--EEEEETTTEEEEEETTEEEE-ECCCBCTT
T ss_pred EcCCCcEEEEE-CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC--EEEEeCCceEEEecCCCCCe-eEeccCCc
Confidence 45677766655 4455544331113333333333456678888998886 44556788888875332221 11111
Q ss_pred -cCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee----CCCCeEEEEEeCCCCEEEEEEcCCeEEEEEC
Q 006360 79 -QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDI 151 (648)
Q Consensus 79 -~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~----h~~~I~slafsPdG~~Lasgs~DG~V~IWDl 151 (648)
.+...+.++.+.+++.+++++ .++.| ++....++.-..+. ....+.++.|.+++ .+++++.+|.|.-++-
T Consensus 246 ~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 246 RRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYVT 320 (327)
T ss_dssp SSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEECC
T ss_pred ccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEcC
Confidence 123458899999877766654 46766 45555565444332 24568889997554 4666778898877764
No 310
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=96.17 E-value=0.021 Score=48.00 Aligned_cols=25 Identities=36% Similarity=0.339 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 622 SILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 622 ~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
....++.+|..||++||.|||+||+
T Consensus 62 ~~~~~v~eLe~everL~~ENq~L~~ 86 (104)
T 3s9g_A 62 RLDARVRELELELDRLRAENLQLLT 86 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHH
Confidence 3445778899999999999999986
No 311
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.16 E-value=0.25 Score=51.64 Aligned_cols=139 Identities=14% Similarity=0.114 Sum_probs=78.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCce--eEEEe--CCCCCcEEEEEEccC---CCeEEEEEeCC-----CeEEEEECC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAK--AAELK--DPNEQVLRVLDYSRN---SRHLLVTAGDD-----GTLHLWDTT 68 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~--i~~l~--~~~~~~V~~Vafspd---g~~lLaSgs~D-----g~V~IWDl~ 68 (648)
+|.|||++++ +..+|.|++++ +++. +..+. .........|+|+|+ +..++++-..+ +.|..|+..
T Consensus 37 a~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~ 113 (352)
T 2ism_A 37 AFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL 113 (352)
T ss_dssp EECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC
T ss_pred EEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC
Confidence 4789998555 55679999998 4442 12221 112345678999998 55455554433 678888876
Q ss_pred CCC-----ceeEEec---cCCCCeEEEEEccCCCEEEEEeC-------------CCeEEEEeCCCC------------ce
Q 006360 69 GRS-----PKVSWLK---QHSAPTAGISFSSDDKIIASVGL-------------DKKLYTYDPGSR------------RP 115 (648)
Q Consensus 69 t~~-----~~v~~l~---~H~~~V~slafsPdg~~LaSgs~-------------Dg~I~IWDl~tg------------k~ 115 (648)
... ..+..+. ........++|.|||.++++.+. .+.|.-+|.... ..
T Consensus 114 ~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~ 193 (352)
T 2ism_A 114 GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGAR 193 (352)
T ss_dssp SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSC
T ss_pred CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCC
Confidence 432 1111122 11123468999999977666442 256766776531 01
Q ss_pred eeEee-CCCCeEEEEEeC-CCCEEEEEEc
Q 006360 116 SSCIT-YEAPFSSLAFID-DDWILTAGTS 142 (648)
Q Consensus 116 v~~~~-h~~~I~slafsP-dG~~Lasgs~ 142 (648)
...+. .......++|+| +|.++++-..
T Consensus 194 ~~i~a~G~rnp~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 194 PEVYSLGHRNPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp TTEEEECCSEECCCEECTTTCCEEEEEEC
T ss_pred ccEEEEcCCCcccEEEECCCCCEEEEEcC
Confidence 11111 112356789999 5665555443
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.91 E-value=0.28 Score=51.84 Aligned_cols=161 Identities=14% Similarity=0.175 Sum_probs=95.0
Q ss_pred CCcEEEEECCCC-c---eeEEEeCCCCCcEEEEEEccCCCeEEEEEe-----------------CCCeEEEEECCCCCce
Q 006360 15 SGDLILHNLASG-A---KAAELKDPNEQVLRVLDYSRNSRHLLVTAG-----------------DDGTLHLWDTTGRSPK 73 (648)
Q Consensus 15 DG~V~IwDl~sg-~---~i~~l~~~~~~~V~~Vafspdg~~lLaSgs-----------------~Dg~V~IWDl~t~~~~ 73 (648)
+..|.+|++... . .+..+.+..-...+++.+.++|. ++++.. ..|.|+-||. ++
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-- 212 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-- 212 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC--
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce--
Confidence 356777766442 2 23445544455678999999987 555543 1244555554 33
Q ss_pred eEEeccCCCCeEEEEEccCCCEEEEEe-CCCeEEEEeCCC-Cce--eeEeeCCCCeEEEEEeC-CCCEEEEEEcC-CeEE
Q 006360 74 VSWLKQHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPGS-RRP--SSCITYEAPFSSLAFID-DDWILTAGTSN-GRVV 147 (648)
Q Consensus 74 v~~l~~H~~~V~slafsPdg~~LaSgs-~Dg~I~IWDl~t-gk~--v~~~~h~~~I~slafsP-dG~~Lasgs~D-G~V~ 147 (648)
++.+...-...+.++|+||++.|+.+. ..+.|+.||+.. +.. ...+...+....+++++ +|++.+++..+ +.|.
T Consensus 213 ~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~ 292 (355)
T 3sre_A 213 VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIF 292 (355)
T ss_dssp CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHH
T ss_pred EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEE
Confidence 223333334679999999998777665 567999999863 332 22334456678899999 59988777655 4566
Q ss_pred EEECCCCCCceEEEeec---CCCCCeeEEEEccCCCeE
Q 006360 148 FYDIRGKPQPLTVLRAC---SSSEAVSSLCWQRAKPVF 182 (648)
Q Consensus 148 IWDl~s~~~~~~~l~~~---~h~~~VtsLafspdg~~L 182 (648)
.||.... .+..+++.. +....|.++ |..+|+.+
T Consensus 293 ~~~P~~~-~~s~v~rI~~~~~~~~~v~~v-~~ddG~~l 328 (355)
T 3sre_A 293 FYDAENP-PGSEVLRIQDILSEEPKVTVV-YAENGTVL 328 (355)
T ss_dssp SCCTTSC-CCEEEEEEECTTSSSCEEEEE-EEECSSSC
T ss_pred EECCCCC-CCCEEEEEEccCCCCcEEEEE-EEcCCCEE
Confidence 6666531 222333221 123334444 55577653
No 313
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=95.84 E-value=0.0098 Score=40.00 Aligned_cols=29 Identities=21% Similarity=0.367 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|+++.+++++|..|+..|..|..|||.+|
T Consensus 3 MnQLEdKvEeLl~~~~~L~~EV~RLk~lL 31 (34)
T 2bni_A 3 MKQIEDKLEEILSKGHHICNELARIKKLL 31 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 78889999999999999999999999886
No 314
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=95.81 E-value=0.01 Score=39.93 Aligned_cols=29 Identities=21% Similarity=0.456 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|+++.+++++|..|+..|..|..|||.+|
T Consensus 3 M~QLEdKVEeLl~~n~~Le~EV~RLk~LL 31 (34)
T 1uo4_A 3 MKQIEDKGEEILSKLYHIENELARIKKLL 31 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 67889999999999999999999999886
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.79 E-value=0.39 Score=48.11 Aligned_cols=142 Identities=13% Similarity=0.135 Sum_probs=76.7
Q ss_pred CCCEEEEEECC-----CcEEEEECCCCc---eeE--EEeCCCCCcEEEEEEccCCCeEEEEEeCC-----CeEEEEECCC
Q 006360 5 KDEHLASISLS-----GDLILHNLASGA---KAA--ELKDPNEQVLRVLDYSRNSRHLLVTAGDD-----GTLHLWDTTG 69 (648)
Q Consensus 5 dG~~Lasgs~D-----G~V~IwDl~sg~---~i~--~l~~~~~~~V~~Vafspdg~~lLaSgs~D-----g~V~IWDl~t 69 (648)
++..++.|+.+ ..+.+||+.+.+ -.. .+.. ......++.+ ++. +++.|+.+ ..+.+||..+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~-~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNV-RRGLAGATTL--GDM-IYVSGGFDGSRRHTSMERYDPNI 137 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSS-CCBSCEEEEE--TTE-EEEECCBCSSCBCCEEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCC-CccceeEEEE--CCE-EEEEcccCCCcccceEEEEcCCC
Confidence 45566677654 468999987765 222 1111 1111122222 444 77777644 3688999877
Q ss_pred CCcee-EEeccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEeCCCCceeeEeeCCC---CeEEEEEeCCCCEEEEE
Q 006360 70 RSPKV-SWLKQHSAPTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCITYEA---PFSSLAFIDDDWILTAG 140 (648)
Q Consensus 70 ~~~~v-~~l~~H~~~V~slafsPdg~~LaSgs~D-----g~I~IWDl~tgk~v~~~~h~~---~I~slafsPdG~~Lasg 140 (648)
..-.. ..+........++.+ ++++++.|+.+ ..+.+||+.+.+-...-.... ...++.+ ++.+++.|
T Consensus 138 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G 213 (301)
T 2vpj_A 138 DQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVG 213 (301)
T ss_dssp TEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred CeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEe
Confidence 65221 111111111122222 67777777765 368999998876443322111 1122222 56777777
Q ss_pred EcC-----CeEEEEECCCC
Q 006360 141 TSN-----GRVVFYDIRGK 154 (648)
Q Consensus 141 s~D-----G~V~IWDl~s~ 154 (648)
+.+ ..|.+||+.+.
T Consensus 214 G~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp CBCSSSBCCCEEEEETTTT
T ss_pred CCCCCcccceEEEEeCCCC
Confidence 764 46899999875
No 316
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.70 E-value=1.2 Score=46.52 Aligned_cols=142 Identities=15% Similarity=0.213 Sum_probs=78.9
Q ss_pred EEEEEccCCCeEEEEEeC-------------CCeEEEEECCCC--------CceeEEeccCCCCeEEEEEcc-CCCEEEE
Q 006360 41 RVLDYSRNSRHLLVTAGD-------------DGTLHLWDTTGR--------SPKVSWLKQHSAPTAGISFSS-DDKIIAS 98 (648)
Q Consensus 41 ~~Vafspdg~~lLaSgs~-------------Dg~V~IWDl~t~--------~~~v~~l~~H~~~V~slafsP-dg~~LaS 98 (648)
..++|.|+|. ++++.+. .+.|.-+|.++. .. .....+|.. ...++|+| ++.++++
T Consensus 138 ~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~-~i~a~G~rn-p~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 138 GRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNS-PIWSYGHRN-PQGIDWHRASGVMVAT 214 (354)
T ss_dssp CCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTC-CEEEECCSC-CCEEEECTTTCCEEEE
T ss_pred ceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCC-cEEEEccCC-cceEEEeCCCCCEEEE
Confidence 4589999997 5555332 245666666543 11 123345544 57899999 6665554
Q ss_pred EeCCC---eEEEEeCCC--------C--------ceeeEe-eCCCCeEEEEEe-------CCCCEEEEEEcCCeEEEEEC
Q 006360 99 VGLDK---KLYTYDPGS--------R--------RPSSCI-TYEAPFSSLAFI-------DDDWILTAGTSNGRVVFYDI 151 (648)
Q Consensus 99 gs~Dg---~I~IWDl~t--------g--------k~v~~~-~h~~~I~slafs-------PdG~~Lasgs~DG~V~IWDl 151 (648)
-.... .|.+..... + .++..+ ........++|. .+|.++++.-..+.|..+++
T Consensus 215 d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~ 294 (354)
T 3a9g_A 215 EHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNF 294 (354)
T ss_dssp ECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEE
T ss_pred ecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEE
Confidence 33322 244332211 0 122222 123456778883 46766666666778999888
Q ss_pred CCCCCceEEEeec-CCCCCeeEEEEccCCCeEEEe
Q 006360 152 RGKPQPLTVLRAC-SSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 152 ~s~~~~~~~l~~~-~h~~~VtsLafspdg~~Las~ 185 (648)
............. .....+..|++.|||.+.++.
T Consensus 295 ~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 295 GDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp CGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred CCCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 7532222111111 224678999999988655554
No 317
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.63 E-value=0.68 Score=50.06 Aligned_cols=128 Identities=12% Similarity=0.170 Sum_probs=82.6
Q ss_pred cCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC----CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCc--------
Q 006360 47 RNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH----SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRR-------- 114 (648)
Q Consensus 47 pdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H----~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk-------- 114 (648)
.++.. ++. ..++.||.-++.... ..+.+.-- -..|..+..+|+|.+||..+. ..|.|..+-.+.
T Consensus 30 ~n~t~-i~~-a~~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 30 QNGTR-IVF-IQDNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp TTTTE-EEE-EETTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHH
T ss_pred cCCCE-EEE-EECCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccc
Confidence 44543 333 245888888876333 13333322 235888999999999998865 468888876321
Q ss_pred ----eeeEee-------CCCCeEEEEEeCC---CCEEEEEEcCCeEEEEECCC-CCCceEEEee-------cCCCCCeeE
Q 006360 115 ----PSSCIT-------YEAPFSSLAFIDD---DWILTAGTSNGRVVFYDIRG-KPQPLTVLRA-------CSSSEAVSS 172 (648)
Q Consensus 115 ----~v~~~~-------h~~~I~slafsPd---G~~Lasgs~DG~V~IWDl~s-~~~~~~~l~~-------~~h~~~Vts 172 (648)
..+.+. ...+|..+.|+|- +..|++-..|+.|++||+.. ...|. .+.. ......|.+
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEE
Confidence 011221 2567999999994 67899999999999999985 33333 3321 122356778
Q ss_pred EEEccCC
Q 006360 173 LCWQRAK 179 (648)
Q Consensus 173 Lafspdg 179 (648)
++|..++
T Consensus 185 ~~Fg~~~ 191 (452)
T 3pbp_A 185 LEFSKDG 191 (452)
T ss_dssp EEECTTS
T ss_pred EEEcCCC
Confidence 8887744
No 318
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.43 E-value=0.83 Score=46.89 Aligned_cols=161 Identities=12% Similarity=0.092 Sum_probs=95.9
Q ss_pred ccCCCCEEEEEE--CCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCC-------------CeEEEEE
Q 006360 2 YNCKDEHLASIS--LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD-------------GTLHLWD 66 (648)
Q Consensus 2 FSpdG~~Lasgs--~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~D-------------g~V~IWD 66 (648)
|+.+|.+|+... .++.|+..+. +|.....+.. .. +--++++++.+.++...+ ..|+..+
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~-dg~~~~~l~~---~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~ 94 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNI-DGSNIHKLSN---DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIK 94 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEET-TSCSCEEEEE---EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEE
T ss_pred EEEeCCEEEEEeCCCCceEEEEcC-CCCCCEEccC---Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEe
Confidence 445666666654 2466777775 4444444542 12 235688898767776554 4677778
Q ss_pred CCCCCceeEEeccCCCCeEEEEEccCCCEEEEEe----CCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEEEEEc
Q 006360 67 TTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVG----LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTS 142 (648)
Q Consensus 67 l~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs----~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~Lasgs~ 142 (648)
+.+... ..+... .+..|++++++|+-.. .+..|+..++.......+..+.. ..|+++++.|+-.+.
T Consensus 95 ~dg~~~--~~l~~~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 95 RNGHGS--TVLDPD----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNP 164 (302)
T ss_dssp TTSCCC--EEEECS----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECT
T ss_pred CCCCcc--eEeecC----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeC
Confidence 877652 223222 1236778888888776 34477777877555444444332 456778888886665
Q ss_pred -CCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 006360 143 -NGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 143 -DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~ 185 (648)
...|++.++.+... +.+. . +... ..+.|++.+|+..
T Consensus 165 g~~~Iy~~~l~g~~~--~~l~--~--~~~~-~~~~P~g~~iy~t 201 (302)
T 3s25_A 165 KNGQLYRYDTASQSE--ALFY--D--CNCY-KPVVLDDTNVYYM 201 (302)
T ss_dssp TTCCEEEEETTTTEE--EEEE--C--SCEE-EEEEEETTEEEEE
T ss_pred CCceEEEEECCCCCE--EEEe--C--CCcc-ceeeecCCEEEEE
Confidence 56788888877532 2232 1 2222 3456888777665
No 319
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.22 E-value=0.51 Score=47.45 Aligned_cols=143 Identities=17% Similarity=0.181 Sum_probs=75.5
Q ss_pred CCCEEEEEECC----CcEEEEECCCCceeEEEeCCC-CCcEEEEEEccCCCeEEEEEeCC------CeEEEEECCCCCce
Q 006360 5 KDEHLASISLS----GDLILHNLASGAKAAELKDPN-EQVLRVLDYSRNSRHLLVTAGDD------GTLHLWDTTGRSPK 73 (648)
Q Consensus 5 dG~~Lasgs~D----G~V~IwDl~sg~~i~~l~~~~-~~~V~~Vafspdg~~lLaSgs~D------g~V~IWDl~t~~~~ 73 (648)
++..++.|+.+ ..+.+||+.+.+-...-.... ......+.+ +++ +++.|+.+ ..+.+||..+..-
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~W- 130 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGK-IYTSGGSEVGNSALYLFECYDTRTESW- 130 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTE-EEEECCBBTTBSCCCCEEEEETTTTEE-
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCE-EEEECCCCCCCcEeeeEEEEeCCCCce-
Confidence 45566677654 568899987765332211111 111122222 444 77777765 4589999987652
Q ss_pred eEEeccC--CCCeEEEEEccCCCEEEEEeC---------CCeEEEEeCCCCceeeEeeCCC--CeEEEEEeCCCCEEEEE
Q 006360 74 VSWLKQH--SAPTAGISFSSDDKIIASVGL---------DKKLYTYDPGSRRPSSCITYEA--PFSSLAFIDDDWILTAG 140 (648)
Q Consensus 74 v~~l~~H--~~~V~slafsPdg~~LaSgs~---------Dg~I~IWDl~tgk~v~~~~h~~--~I~slafsPdG~~Lasg 140 (648)
..+... ...-.+++. -++++++.|+. -..+.+||+.+.+-...-.... .-.+++.. ++.+++.|
T Consensus 131 -~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~G 207 (306)
T 3ii7_A 131 -HTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVG 207 (306)
T ss_dssp -EEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEC
T ss_pred -EeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEe
Confidence 222111 111112222 26677777664 3458899998876443322111 11122222 56677777
Q ss_pred EcC-----CeEEEEECCCC
Q 006360 141 TSN-----GRVVFYDIRGK 154 (648)
Q Consensus 141 s~D-----G~V~IWDl~s~ 154 (648)
+.+ ..|.+||+.+.
T Consensus 208 G~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 208 GQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp CEETTEEBCCEEEEETTTT
T ss_pred CCCCCCCCceEEEeeCCCC
Confidence 653 35899999875
No 320
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.09 E-value=4.7 Score=43.72 Aligned_cols=167 Identities=15% Similarity=0.157 Sum_probs=101.7
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC-
Q 006360 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS- 81 (648)
Q Consensus 3 SpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~- 81 (648)
||..+.||.=. ..++.|||+++...+..+.- ...++. -+|-.+. .|+... +..|+-|++.+....++.+..|.
T Consensus 74 nP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~Vvf-WkWis~~--~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~ 147 (494)
T 1bpo_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTF-WKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSS 147 (494)
T ss_dssp CSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCE-EEEEETT--EEEEEC-SSEEEEEESSSSCCCEEEEECCGG
T ss_pred CCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceE-EEecCCC--eEEEEc-CCeeEEecccCCCCchhheecchh
Confidence 67777676554 67899999999988888875 444544 4665444 455443 47899999976555566666553
Q ss_pred ---CCeEEEEEccCCCEEEEEeC-------CCeEEEEeCCCCce------------------------------------
Q 006360 82 ---APTAGISFSSDDKIIASVGL-------DKKLYTYDPGSRRP------------------------------------ 115 (648)
Q Consensus 82 ---~~V~slafsPdg~~LaSgs~-------Dg~I~IWDl~tgk~------------------------------------ 115 (648)
..|..-..+++.++++..+- .|.+.+|..+.+..
T Consensus 148 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 227 (494)
T 1bpo_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (494)
T ss_dssp GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCE
T ss_pred cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 34556666777777664432 23444554432210
Q ss_pred eeEe--eC----------------------CCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCee
Q 006360 116 SSCI--TY----------------------EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVS 171 (648)
Q Consensus 116 v~~~--~h----------------------~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~Vt 171 (648)
++.+ ++ ..-..++..++.-..++.-+.-|.|++||+.++.. +..-+ -..+.|.
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~-i~~nr--Is~~~iF 304 (494)
T 1bpo_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC-IYMNR--ISGETIF 304 (494)
T ss_dssp EEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE-EEEEE--CCSSCEE
T ss_pred EEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEeccccee-eeeec--ccCCceE
Confidence 0000 00 12234566777777888899999999999999843 22222 3445565
Q ss_pred EEEEccC
Q 006360 172 SLCWQRA 178 (648)
Q Consensus 172 sLafspd 178 (648)
.-+-+..
T Consensus 305 ~t~~~~~ 311 (494)
T 1bpo_A 305 VTAPHEA 311 (494)
T ss_dssp EEEEETT
T ss_pred EecccCC
Confidence 5555443
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.06 E-value=0.74 Score=46.17 Aligned_cols=141 Identities=11% Similarity=0.130 Sum_probs=74.4
Q ss_pred CCCEEEEEECC-----CcEEEEECCCCceeEEEeC-CC-CCcEEEEEEccCCCeEEEEEeCCC-----eEEEEECCCCCc
Q 006360 5 KDEHLASISLS-----GDLILHNLASGAKAAELKD-PN-EQVLRVLDYSRNSRHLLVTAGDDG-----TLHLWDTTGRSP 72 (648)
Q Consensus 5 dG~~Lasgs~D-----G~V~IwDl~sg~~i~~l~~-~~-~~~V~~Vafspdg~~lLaSgs~Dg-----~V~IWDl~t~~~ 72 (648)
++..++.|+.+ ..+.+||..+.+-.. +.. .. .....++.+ ++. +++.|+.++ .+.+||+.+..-
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W 136 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS-VANMRDRRSTLGAAVL--NGL-LYAVGGFDGSTGLSSVEAYNIKSNEW 136 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEE--TTE-EEEEEEECSSCEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceee-CCCCCccccceEEEEE--CCE-EEEEcCCCCCccCceEEEEeCCCCeE
Confidence 45566666654 358889987654322 221 11 111122222 444 777777553 578889877652
Q ss_pred eeEEeccCC--CCeEEEEEccCCCEEEEEeCC-------CeEEEEeCCCCceeeEee--CC-CCeEEEEEeCCCCEEEEE
Q 006360 73 KVSWLKQHS--APTAGISFSSDDKIIASVGLD-------KKLYTYDPGSRRPSSCIT--YE-APFSSLAFIDDDWILTAG 140 (648)
Q Consensus 73 ~v~~l~~H~--~~V~slafsPdg~~LaSgs~D-------g~I~IWDl~tgk~v~~~~--h~-~~I~slafsPdG~~Lasg 140 (648)
..+.... ..-.+++. -++++++.|+.+ ..+.+||+.+.+-...-. .. ....++.+ ++.+++.|
T Consensus 137 --~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 211 (302)
T 2xn4_A 137 --FHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVG 211 (302)
T ss_dssp --EEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred --eecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEEC
Confidence 2222111 11112222 256777776643 358899998876443321 11 11122222 56777777
Q ss_pred EcC-----CeEEEEECCCC
Q 006360 141 TSN-----GRVVFYDIRGK 154 (648)
Q Consensus 141 s~D-----G~V~IWDl~s~ 154 (648)
+.+ ..|.+||+.+.
T Consensus 212 G~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 212 GHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp CBSSSSBCCCEEEEETTTT
T ss_pred CCCCCcccceEEEEeCCCC
Confidence 764 36899999875
No 322
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.03 E-value=0.46 Score=46.95 Aligned_cols=134 Identities=11% Similarity=0.122 Sum_probs=79.5
Q ss_pred CCEEEEEECCCcEEEEECCCCc------eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 006360 6 DEHLASISLSGDLILHNLASGA------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (648)
Q Consensus 6 G~~Lasgs~DG~V~IwDl~sg~------~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~ 79 (648)
...|+....| +|+.=....+. ....+-...-..+.+++|+|++. +.+. .+|.++-.+..+.... ..+ +
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~-~W~-~ 77 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDND-NWM-G 77 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTC-CHH-H
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCCcc-ccc-c
Confidence 3456666777 66665555444 22333321123566899999887 4444 6777666665432211 111 1
Q ss_pred CCCC--------eEEEEEccCCCEEEEEeCCCeEEEEeCCCCcee------eEee--CCCCeEEEEEeCCCCEEEEEEcC
Q 006360 80 HSAP--------TAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS------SCIT--YEAPFSSLAFIDDDWILTAGTSN 143 (648)
Q Consensus 80 H~~~--------V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v------~~~~--h~~~I~slafsPdG~~Lasgs~D 143 (648)
.... ..++.|.|++.+.++ .||.|+-++.-+.... ..+. .-..+.+|.|.|+|.+.++. |
T Consensus 78 s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--d 153 (236)
T 1tl2_A 78 RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--G 153 (236)
T ss_dssp HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--T
T ss_pred cccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--C
Confidence 1222 378899999998887 5699988886432211 1121 11457999999999877766 7
Q ss_pred CeEEEE
Q 006360 144 GRVVFY 149 (648)
Q Consensus 144 G~V~IW 149 (648)
+.++-+
T Consensus 154 g~lyr~ 159 (236)
T 1tl2_A 154 QQFYKA 159 (236)
T ss_dssp TEEEEE
T ss_pred CcEEec
Confidence 875443
No 323
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.95 E-value=0.4 Score=50.32 Aligned_cols=143 Identities=15% Similarity=0.220 Sum_probs=82.1
Q ss_pred CcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe---ccCCCCeEEEEEccC---CCEEEEEeC----C----C
Q 006360 38 QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL---KQHSAPTAGISFSSD---DKIIASVGL----D----K 103 (648)
Q Consensus 38 ~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l---~~H~~~V~slafsPd---g~~LaSgs~----D----g 103 (648)
.....++|.|+++ +++ +..++.|+++|.... ..+..+ .........|+|+|+ +..|+.+.. + .
T Consensus 29 ~~P~~ia~~pdG~-l~V-~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLV-TERPGRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTE-EEE-EETTTEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCe-EEE-EeCCCEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 3456799999997 444 466799999974432 222221 122356899999997 555554433 3 5
Q ss_pred eEEEEeCCCC--c---e--e-eEee--CCCCeEEEEEeCCCCEEEEEEc-------------CCeEEEEECCCCC---C-
Q 006360 104 KLYTYDPGSR--R---P--S-SCIT--YEAPFSSLAFIDDDWILTAGTS-------------NGRVVFYDIRGKP---Q- 156 (648)
Q Consensus 104 ~I~IWDl~tg--k---~--v-~~~~--h~~~I~slafsPdG~~Lasgs~-------------DG~V~IWDl~s~~---~- 156 (648)
.|..|+.... . . + ..+. .......++|.|||.++++-+. .|.|.-+|....- .
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 6778887654 1 1 1 1122 1223467999999986665332 2567666665420 0
Q ss_pred --ceEEEeecCCCCCeeEEEEcc-CCCeEEEe
Q 006360 157 --PLTVLRACSSSEAVSSLCWQR-AKPVFIDE 185 (648)
Q Consensus 157 --~~~~l~~~~h~~~VtsLafsp-dg~~Las~ 185 (648)
...++. .+|. ....++|++ +|.+.++.
T Consensus 186 f~~~~i~a-~G~r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 186 FPNSPIWS-YGHR-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp STTCCEEE-ECCS-CCCEEEECTTTCCEEEEE
T ss_pred CCCCcEEE-EccC-CcceEEEeCCCCCEEEEe
Confidence 012222 2443 356799999 66665554
No 324
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=94.85 E-value=0.033 Score=37.13 Aligned_cols=29 Identities=17% Similarity=0.145 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|+++.+++++|..|+..|..|..|||.+|
T Consensus 2 MnQLEdKVEell~~~~~le~EV~Rl~~ll 30 (33)
T 2wq1_A 2 MKQLEDKIEENTSKIYHNTNEIARNTKLV 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 77888899999999999999999999874
No 325
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.73 E-value=0.83 Score=49.68 Aligned_cols=101 Identities=10% Similarity=0.185 Sum_probs=57.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeE--EEeCC-----CCCcEEEEEEccC---CCeEEEEEeC------------
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAA--ELKDP-----NEQVLRVLDYSRN---SRHLLVTAGD------------ 58 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~--~l~~~-----~~~~V~~Vafspd---g~~lLaSgs~------------ 58 (648)
+|.|||+++++-...+.|++++..+++... .+... ....+..|+|+|+ +..++++-+.
T Consensus 33 a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~ 112 (454)
T 1cru_A 33 LWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPN 112 (454)
T ss_dssp EECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCE
T ss_pred EEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcccccc
Confidence 478999877755333479888865554322 22210 1345668999995 5545554432
Q ss_pred CCeEEEEECCCCC-------ceeEEec-cCCCCeEEEEEccCCCEEEEEeC
Q 006360 59 DGTLHLWDTTGRS-------PKVSWLK-QHSAPTAGISFSSDDKIIASVGL 101 (648)
Q Consensus 59 Dg~V~IWDl~t~~-------~~v~~l~-~H~~~V~slafsPdg~~LaSgs~ 101 (648)
...|.-|+..... ..+..+. ........|+|.|||+++++.+.
T Consensus 113 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 113 QTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 2356666653321 1111121 11224689999999998887664
No 326
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.70 E-value=6.8 Score=47.68 Aligned_cols=147 Identities=12% Similarity=0.066 Sum_probs=90.9
Q ss_pred ccCCCCEEEEEECC---------CcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc
Q 006360 2 YNCKDEHLASISLS---------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (648)
Q Consensus 2 FSpdG~~Lasgs~D---------G~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~ 72 (648)
|..+...|+++... ..|++++...+..+.++....+..|...+.+. . +++.+. ++.+.++++..+..
T Consensus 469 f~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~-~vvva~-g~~l~~fel~~~~L 544 (1158)
T 3ei3_A 469 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNS--S-QVVVAV-GRALYYLQIHPQEL 544 (1158)
T ss_dssp CCSSSCEEEEEEETTTEEEEEESSCEEEEESSSCCEEEEECCTTCCCCCEEEECS--S-EEEEEE-TTEEEEEEEETTEE
T ss_pred ccCCCCcEEEEEcCCCeEEEEecCEEEEEECCCCeEEEEEECCCCCEEEEEEeCC--C-EEEEEE-CCEEEEEEeeCCce
Confidence 44455555555421 23666776555566666644444555555543 3 454444 67888888765432
Q ss_pred eeEEeccCCCCeEEEEEccC------CCEEEEEeC-CCeEEEEeCCCCceeeEeeC--CCCeEEEEEeC--CCCEEEEEE
Q 006360 73 KVSWLKQHSAPTAGISFSSD------DKIIASVGL-DKKLYTYDPGSRRPSSCITY--EAPFSSLAFID--DDWILTAGT 141 (648)
Q Consensus 73 ~v~~l~~H~~~V~slafsPd------g~~LaSgs~-Dg~I~IWDl~tgk~v~~~~h--~~~I~slafsP--dG~~Lasgs 141 (648)
....-..-...|.|+++.+. ..+++.|.. |++|+|+++.+.+.+..... .....++.+.. ...+|.+|-
T Consensus 545 ~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl 624 (1158)
T 3ei3_A 545 RQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCAL 624 (1158)
T ss_dssp EEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEE
T ss_pred eeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEe
Confidence 21122233567999999863 478899986 99999999987766654432 23455555442 345788999
Q ss_pred cCCeEEEEECC
Q 006360 142 SNGRVVFYDIR 152 (648)
Q Consensus 142 ~DG~V~IWDl~ 152 (648)
.||.+.-+.+.
T Consensus 625 ~dG~l~~~~~d 635 (1158)
T 3ei3_A 625 GDGALFYFGLN 635 (1158)
T ss_dssp TTSEEEEEEEC
T ss_pred CCCeEEEEEEc
Confidence 99998766654
No 327
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.63 E-value=0.72 Score=48.48 Aligned_cols=139 Identities=14% Similarity=0.125 Sum_probs=77.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeE--EEe---CCCCCcEEEEEEccC---CCeEEEEE--eCCCeEEEEECCCC
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAA--ELK---DPNEQVLRVLDYSRN---SRHLLVTA--GDDGTLHLWDTTGR 70 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~--~l~---~~~~~~V~~Vafspd---g~~lLaSg--s~Dg~V~IWDl~t~ 70 (648)
+|.|||+++++--..|.|++++...++... .+. .........|+|+|+ +..++++- ..++.|.-|.+...
T Consensus 38 a~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~ 117 (347)
T 3das_A 38 APLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEK 117 (347)
T ss_dssp EECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTT
T ss_pred EEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCC
Confidence 478999977766448999999865555321 121 112445678999985 34244432 24556666766541
Q ss_pred ----------CceeEEec-cCCCCeEEEEEccCCCEEEEEeC-------------CCeEEEEeCCCC---------ceee
Q 006360 71 ----------SPKVSWLK-QHSAPTAGISFSSDDKIIASVGL-------------DKKLYTYDPGSR---------RPSS 117 (648)
Q Consensus 71 ----------~~~v~~l~-~H~~~V~slafsPdg~~LaSgs~-------------Dg~I~IWDl~tg---------k~v~ 117 (648)
+..+..+. ........|.|.|||.++++.+. .|.|.-+|.... ..+.
T Consensus 118 ~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~ 197 (347)
T 3das_A 118 KPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVY 197 (347)
T ss_dssp SCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEE
T ss_pred CcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEE
Confidence 11111121 11123467999999988777653 245555555422 1112
Q ss_pred EeeCCCCeEEEEEeCCCCEEEEE
Q 006360 118 CITYEAPFSSLAFIDDDWILTAG 140 (648)
Q Consensus 118 ~~~h~~~I~slafsPdG~~Lasg 140 (648)
..++. ....++|+|+|.++++-
T Consensus 198 a~G~R-Np~Gla~dp~G~L~~~d 219 (347)
T 3das_A 198 SYGHR-NVQGLAWDDKQRLFASE 219 (347)
T ss_dssp EBCCS-BCCEEEECTTCCEEEEE
T ss_pred eeCCC-CcceEEECCCCCEEEEe
Confidence 22232 34578888887655543
No 328
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.62 E-value=5.1 Score=41.86 Aligned_cols=166 Identities=14% Similarity=0.153 Sum_probs=100.4
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC-
Q 006360 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS- 81 (648)
Q Consensus 3 SpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~- 81 (648)
||..+.||.=. ...|.|||+++...++.+.- ....+. -+|-.+. .|+... +..|+-|++.+....++.+..|.
T Consensus 75 nP~~~ViALra-g~~LQiFnletK~klks~~~-~e~Vvf-WkWis~~--~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~ 148 (365)
T 2xzh_A 75 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTF-WKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSS 148 (365)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEE-EEECSSS--EEEEEE-SSEEEEEESSTTCCCEEEEECCGG
T ss_pred CCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEE-EEecCCC--eEEEEc-CCcEEEEcccCCCCCceeeecchh
Confidence 67777777654 67899999999988888875 344443 5676544 455544 37799999976554566665553
Q ss_pred ---CCeEEEEEccCCCEEEEEeC-------CCeEEEEeCCCCce------------------------------------
Q 006360 82 ---APTAGISFSSDDKIIASVGL-------DKKLYTYDPGSRRP------------------------------------ 115 (648)
Q Consensus 82 ---~~V~slafsPdg~~LaSgs~-------Dg~I~IWDl~tgk~------------------------------------ 115 (648)
..|..-..+++.++++..+- .|.+.+|..+.+..
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 228 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 228 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEE
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 34555566667776654432 13445554432210
Q ss_pred eeEe--eC----------------------CCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCee
Q 006360 116 SSCI--TY----------------------EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVS 171 (648)
Q Consensus 116 v~~~--~h----------------------~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~Vt 171 (648)
++.+ ++ .+-..++..++.-..++.-+.-|.|++||+.++.. +..-+ -..+.|.
T Consensus 229 LhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~-i~~nr--IS~d~iF 305 (365)
T 2xzh_A 229 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC-IYMNR--ISGETIF 305 (365)
T ss_dssp EEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE-EEEEE--CCSSCEE
T ss_pred EEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcE-EEEec--cCCCceE
Confidence 0000 01 11233556666667888889999999999999843 22222 3445565
Q ss_pred EEEEcc
Q 006360 172 SLCWQR 177 (648)
Q Consensus 172 sLafsp 177 (648)
.-+-+.
T Consensus 306 ~ta~~~ 311 (365)
T 2xzh_A 306 VTAPHE 311 (365)
T ss_dssp EEEEEG
T ss_pred EecccC
Confidence 555443
No 329
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=94.59 E-value=0.041 Score=37.43 Aligned_cols=29 Identities=14% Similarity=0.218 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|+++.+++++|..|+..|..|..|||.+|
T Consensus 3 MnQLE~KVEeLl~~~~~Le~eV~RLk~ll 31 (36)
T 1kd8_B 3 VKQLKAKVEELKSKLWHLKNKVARLKKKN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 67788888888888888888888888764
No 330
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=94.54 E-value=0.064 Score=37.93 Aligned_cols=35 Identities=26% Similarity=0.533 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 614 TQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 614 ~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
.||+.-..+...+.+||.+-|-.|.+||+-|||.|
T Consensus 6 ~eLE~r~k~le~~naeLEervstLq~EN~mLRqvl 40 (42)
T 2oqq_A 6 SELENRVKDLENKNSELEERLSTLQNENQMLRHIL 40 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 45666667778889999999999999999999975
No 331
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=94.54 E-value=0.44 Score=41.41 Aligned_cols=68 Identities=21% Similarity=0.324 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHH------HHHHHhHHhHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 577 QLFQRTLEETLDSFQK------SIHEDMRNLHIEILR---QFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQL 644 (648)
Q Consensus 577 ~~~~~~~~~~~~~~~~------~~~~~~~~lh~~~~r---~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~l 644 (648)
+||++=|....+.||+ .+.+=|++|-..|-+ |.+.+-.|+.+-+..+..++.+..+|+++||+||+-|
T Consensus 28 ~lLq~qLTqAQe~l~~~eaQAaTCNqTV~tL~~SL~~ekaq~q~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~ 104 (121)
T 3mq7_A 28 HLLQQELTEAQKGFQDVEAQAATANHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVL 104 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhh
Confidence 3555555555454443 234556777665544 4455556666667777778888999999999999865
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.50 E-value=0.86 Score=52.30 Aligned_cols=148 Identities=10% Similarity=0.128 Sum_probs=83.2
Q ss_pred CCCEEEEEECC----CcEEEEECCCCceeEEE-e-----CCCCCcEEEEEEcc-CCCeEEEEEeCC------CeEEEEEC
Q 006360 5 KDEHLASISLS----GDLILHNLASGAKAAEL-K-----DPNEQVLRVLDYSR-NSRHLLVTAGDD------GTLHLWDT 67 (648)
Q Consensus 5 dG~~Lasgs~D----G~V~IwDl~sg~~i~~l-~-----~~~~~~V~~Vafsp-dg~~lLaSgs~D------g~V~IWDl 67 (648)
++..++.||.+ ..+.+||..+++-...- . ......-++++... ++. +++.|+.+ ..+.+||.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~-lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQ-LLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTE-EEEECCBSSTTCBCCCCEEEET
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCE-EEEEcCCCCCCCccccEEEEeC
Confidence 45667777653 46889998776543322 1 11111222333333 454 77777654 35889998
Q ss_pred CCCCceeEEeccC--CCCeEEEEEccCCCEEEEEeCCC--eEEEEeCCCCceeeEee------CCCCeEEEEEeCC-CCE
Q 006360 68 TGRSPKVSWLKQH--SAPTAGISFSSDDKIIASVGLDK--KLYTYDPGSRRPSSCIT------YEAPFSSLAFIDD-DWI 136 (648)
Q Consensus 68 ~t~~~~v~~l~~H--~~~V~slafsPdg~~LaSgs~Dg--~I~IWDl~tgk~v~~~~------h~~~I~slafsPd-G~~ 136 (648)
.+... ..+... ...-.+++...++++++.|+.++ .+.+||+.+.+-...-. ......++.+..+ +.+
T Consensus 476 ~t~~W--~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREW--SMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEE--EECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcE--EECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 77542 222111 11112233324788888888765 69999998876433221 1122234566655 667
Q ss_pred EEEEEc--C-----CeEEEEECCCCC
Q 006360 137 LTAGTS--N-----GRVVFYDIRGKP 155 (648)
Q Consensus 137 Lasgs~--D-----G~V~IWDl~s~~ 155 (648)
++.|+. + ..|.+||+.+..
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCc
Confidence 777765 2 358999998764
No 333
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.49 E-value=0.42 Score=50.02 Aligned_cols=139 Identities=11% Similarity=0.042 Sum_probs=73.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEEe------CCCCCcEEEEEEccC---CCeEEEEEeC-------CCeEEE
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELK------DPNEQVLRVLDYSRN---SRHLLVTAGD-------DGTLHL 64 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~------~~~~~~V~~Vafspd---g~~lLaSgs~-------Dg~V~I 64 (648)
+|.|||++|+++...|.|++++. .++....+. .........|+|+|+ +..++++-.. ...|..
T Consensus 24 ~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r 102 (353)
T 2g8s_A 24 AFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGY 102 (353)
T ss_dssp EECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEE
T ss_pred EEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEE
Confidence 47899983445567899999985 443221111 112234578999996 4535554332 235666
Q ss_pred EECCCCCce---eE-Eecc------CCCCeEEEEEccCCCEEEEEeCC-------------CeEEEEeCCCCc-------
Q 006360 65 WDTTGRSPK---VS-WLKQ------HSAPTAGISFSSDDKIIASVGLD-------------KKLYTYDPGSRR------- 114 (648)
Q Consensus 65 WDl~t~~~~---v~-~l~~------H~~~V~slafsPdg~~LaSgs~D-------------g~I~IWDl~tgk------- 114 (648)
|++...... .. .+.. .......|+|.|||.++++.+.. +.|.-+|....-
T Consensus 103 ~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~ 182 (353)
T 2g8s_A 103 GRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFI 182 (353)
T ss_dssp EEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTT
T ss_pred EEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCc
Confidence 776543110 11 1111 11123679999999766665432 467777765320
Q ss_pred -----eeeEee-CCCCeEEEEEeCCCCEEEEE
Q 006360 115 -----PSSCIT-YEAPFSSLAFIDDDWILTAG 140 (648)
Q Consensus 115 -----~v~~~~-h~~~I~slafsPdG~~Lasg 140 (648)
...++. .......++|+|+...|.++
T Consensus 183 ~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 183 KESGVRAEIWSYGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TSTTSCTTEEEECCSEEEEEEEETTTTEEEEE
T ss_pred CCCCCCccEEEEcCcCccceEEECCCCCEEEE
Confidence 111221 12236788899843334443
No 334
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=94.45 E-value=0.047 Score=36.73 Aligned_cols=29 Identities=14% Similarity=0.261 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|+++..++++|..|+..|-.|..|||.+|
T Consensus 3 MnQledKvEel~~~~~~l~nEv~Rl~~lL 31 (34)
T 2r2v_A 3 LKQVADKLEEVASKLYHNANELARVAKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 67888899999999999999999999875
No 335
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=94.43 E-value=0.058 Score=42.07 Aligned_cols=36 Identities=28% Similarity=0.364 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 613 ETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 613 ~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
..+|..-.+.+..+..+|.+||..|++|+.+|+++|
T Consensus 24 ~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~l 59 (61)
T 1t2k_D 24 VQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLL 59 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 446666677888889999999999999999999874
No 336
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=94.42 E-value=0.078 Score=43.48 Aligned_cols=37 Identities=19% Similarity=0.355 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 612 QETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 612 ~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
.++|+..-.+++..+...|..||++|++|+..||++|
T Consensus 37 r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll 73 (78)
T 1gu4_A 37 RNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLF 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667778888889999999999999999999986
No 337
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=94.40 E-value=0.067 Score=42.08 Aligned_cols=36 Identities=19% Similarity=0.313 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 613 ETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 613 ~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
..+|..-.+++..+..+|..+|+.|++|++.||++|
T Consensus 25 ~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll 60 (63)
T 1ci6_A 25 QEALTGECKELEKKNEALKERADSLAKEIQYLKDLI 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666667788889999999999999999999985
No 338
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=94.18 E-value=0.04 Score=36.98 Aligned_cols=29 Identities=14% Similarity=0.169 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|+++.+++++|..|+..|..|..|||.+|
T Consensus 3 MnQLEdkVEeLl~~~~~Le~eV~RL~~ll 31 (34)
T 2hy6_A 3 VKQLADAVEELASANYHLANAVARLAKAV 31 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 67778888999999999999999998764
No 339
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.12 E-value=0.72 Score=45.58 Aligned_cols=138 Identities=12% Similarity=0.065 Sum_probs=78.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCce------eEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-
Q 006360 1 MYNCKDEHLASISLSGDLILHNLASGAK------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK- 73 (648)
Q Consensus 1 AFSpdG~~Lasgs~DG~V~IwDl~sg~~------i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~- 73 (648)
||+|||.+.++ .+|.++-.+..+... -..+-..--....++.|.+++. +.++ .||.|+-|+-.+....
T Consensus 47 af~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~iyr~~pP~~~~~~ 121 (236)
T 1tl2_A 47 FLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKLYKASPPQSDTDN 121 (236)
T ss_dssp EECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCC
T ss_pred EECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCC-EEEe--CCCEEEEeCCCcCCCCc
Confidence 58999987666 678777777644221 1222110111135688999997 4444 5699988876332211
Q ss_pred -----eEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCc------eeeEee--CCCCeEEEEEeCCCCEEEEE
Q 006360 74 -----VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRR------PSSCIT--YEAPFSSLAFIDDDWILTAG 140 (648)
Q Consensus 74 -----v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk------~v~~~~--h~~~I~slafsPdG~~Lasg 140 (648)
...-...=..+..|.|.|+|.+.+.. |+.++-+..-++. ....+. .-....-+.|.++|.+.++.
T Consensus 122 Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 122 WIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp HHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred eeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe
Confidence 11111122467999999999887766 7776544332221 112222 12234456788998877766
Q ss_pred EcCCeEE
Q 006360 141 TSNGRVV 147 (648)
Q Consensus 141 s~DG~V~ 147 (648)
+|.++
T Consensus 200 --~g~~Y 204 (236)
T 1tl2_A 200 --GGKFY 204 (236)
T ss_dssp --TTEEE
T ss_pred --CCeEE
Confidence 77443
No 340
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.07 E-value=0.57 Score=46.88 Aligned_cols=140 Identities=9% Similarity=0.070 Sum_probs=76.3
Q ss_pred CCCEEEEEECC-----CcEEEEECCCCceeE--EEeCCCCCcEEEEEEccCCCeEEEEEeCC-----CeEEEEECCCCCc
Q 006360 5 KDEHLASISLS-----GDLILHNLASGAKAA--ELKDPNEQVLRVLDYSRNSRHLLVTAGDD-----GTLHLWDTTGRSP 72 (648)
Q Consensus 5 dG~~Lasgs~D-----G~V~IwDl~sg~~i~--~l~~~~~~~V~~Vafspdg~~lLaSgs~D-----g~V~IWDl~t~~~ 72 (648)
+++.++.|+.+ ..+.+||+.+.+-.. .+.. ......++.+ +++ +++.|+.+ ..+.+||+.+..-
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W 187 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQT-AREGAGLVVA--SGV-IYCLGGYDGLNILNSVEKYDPHTGHW 187 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSS-CCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCC-CcccceEEEE--CCE-EEEECCCCCCcccceEEEEeCCCCcE
Confidence 45566666643 358889987654322 2221 1111122222 444 77777654 4588999977652
Q ss_pred eeEEeccCC---CCeEEEEEccCCCEEEEEeCC-----CeEEEEeCCCCceeeEee--CC-CCeEEEEEeCCCCEEEEEE
Q 006360 73 KVSWLKQHS---APTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCIT--YE-APFSSLAFIDDDWILTAGT 141 (648)
Q Consensus 73 ~v~~l~~H~---~~V~slafsPdg~~LaSgs~D-----g~I~IWDl~tgk~v~~~~--h~-~~I~slafsPdG~~Lasgs 141 (648)
..+.... ....++.+ ++++++.|+.+ ..|.+||+.+.+-...-. .. ....++.+ ++.+++.|+
T Consensus 188 --~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG 261 (301)
T 2vpj_A 188 --TNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAG 261 (301)
T ss_dssp --EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred --EeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcC
Confidence 2222111 11122222 67777777764 468999998876443322 11 11222222 667777777
Q ss_pred cC-----CeEEEEECCCC
Q 006360 142 SN-----GRVVFYDIRGK 154 (648)
Q Consensus 142 ~D-----G~V~IWDl~s~ 154 (648)
.+ ..|.+||+.+.
T Consensus 262 ~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 262 YDGNSLLSSIECYDPIID 279 (301)
T ss_dssp BCSSSBEEEEEEEETTTT
T ss_pred cCCCcccccEEEEcCCCC
Confidence 65 35888998765
No 341
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=94.05 E-value=0.043 Score=37.29 Aligned_cols=29 Identities=17% Similarity=0.188 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|+++..++++|..|+..|..|..|||.+|
T Consensus 3 MnQLE~kVEeLl~~~~~Le~EV~RL~~ll 31 (36)
T 1kd8_A 3 VKQLEAEVEEIESEVWHLENEVARLEKEN 31 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 55666777777777777777777777653
No 342
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.02 E-value=0.61 Score=46.80 Aligned_cols=141 Identities=14% Similarity=0.166 Sum_probs=75.4
Q ss_pred CCCEEEEEECCC-----cEEEEECCCCceeEEEeC-CC-CCcEEEEEEccCCCeEEEEEeCC-------CeEEEEECCCC
Q 006360 5 KDEHLASISLSG-----DLILHNLASGAKAAELKD-PN-EQVLRVLDYSRNSRHLLVTAGDD-------GTLHLWDTTGR 70 (648)
Q Consensus 5 dG~~Lasgs~DG-----~V~IwDl~sg~~i~~l~~-~~-~~~V~~Vafspdg~~lLaSgs~D-------g~V~IWDl~t~ 70 (648)
++..++.|+.++ .+.+||+.+.+-.. +.. .. .....++.+ +++ +++.|+.+ ..+.+||+.+.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH-VAPMNTRRSSVGVGVV--GGL-LYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEE-ECCCSSCCBSCEEEEE--TTE-EEEECCEETTTTEECCCEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEee-cCCCCCcccCceEEEE--CCE-EEEEeCCCCCCCccccEEEEEeCCCC
Confidence 456667777553 57888987654322 221 11 111122222 444 66666542 45889999776
Q ss_pred CceeEEeccC---CCCeEEEEEccCCCEEEEEeCCC-----eEEEEeCCCCceeeEeeCC--CCeEEEEEeCCCCEEEEE
Q 006360 71 SPKVSWLKQH---SAPTAGISFSSDDKIIASVGLDK-----KLYTYDPGSRRPSSCITYE--APFSSLAFIDDDWILTAG 140 (648)
Q Consensus 71 ~~~v~~l~~H---~~~V~slafsPdg~~LaSgs~Dg-----~I~IWDl~tgk~v~~~~h~--~~I~slafsPdG~~Lasg 140 (648)
.- ..+... ......+.+ ++++++.|+.++ .+.+||+.+.+-...-... ..-.+++. -++.+++.|
T Consensus 184 ~W--~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~G 258 (302)
T 2xn4_A 184 EW--TYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVG 258 (302)
T ss_dssp EE--EEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEC
T ss_pred cE--EECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEEC
Confidence 52 222111 111122222 677777777653 6899999887644332211 11112222 266777777
Q ss_pred EcCC-----eEEEEECCCC
Q 006360 141 TSNG-----RVVFYDIRGK 154 (648)
Q Consensus 141 s~DG-----~V~IWDl~s~ 154 (648)
+.++ .|.+||+.+.
T Consensus 259 G~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 259 GDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp CBCSSSBCCCEEEEETTTT
T ss_pred CcCCCcccccEEEEcCCCC
Confidence 7653 4899998875
No 343
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=94.02 E-value=0.08 Score=44.32 Aligned_cols=36 Identities=19% Similarity=0.351 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 613 ETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 613 ~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
++|+..-.+++..+.+.|..||++|++|+++||++|
T Consensus 38 ~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll 73 (87)
T 1hjb_A 38 NLETQHKVLELTAENERLQKKVEQLSRELSTLRNLF 73 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346666678888889999999999999999999875
No 344
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.53 E-value=1.6 Score=44.04 Aligned_cols=143 Identities=13% Similarity=0.101 Sum_probs=74.7
Q ss_pred CCCCEEEEEEC----C-------CcEEEEECCCCceeEEEeCCCCCc-EEEEEEccCCCeEEEEEeCC--------CeEE
Q 006360 4 CKDEHLASISL----S-------GDLILHNLASGAKAAELKDPNEQV-LRVLDYSRNSRHLLVTAGDD--------GTLH 63 (648)
Q Consensus 4 pdG~~Lasgs~----D-------G~V~IwDl~sg~~i~~l~~~~~~~-V~~Vafspdg~~lLaSgs~D--------g~V~ 63 (648)
.++..++.|+. + ..+.+||..+.+-. .+....... -.+++.. ++. +++.|+.+ ..+.
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~ 120 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GMPPLPSPRCLFGLGEA-LNS-IYVVGGREIKDGERCLDSVM 120 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-ECCCBSSCEESCEEEEE-TTE-EEEECCEESSTTCCBCCCEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-ECCCCCcchhceeEEEE-CCE-EEEEeCCcCCCCCcccceEE
Confidence 35677777873 1 12788898765432 222111111 1112222 343 67777632 4588
Q ss_pred EEECCCCCceeEEeccCC-CC-eEEEEEccCCCEEEEEeC-C-----CeEEEEeCCCCceeeEeeCCC---CeEEEEEeC
Q 006360 64 LWDTTGRSPKVSWLKQHS-AP-TAGISFSSDDKIIASVGL-D-----KKLYTYDPGSRRPSSCITYEA---PFSSLAFID 132 (648)
Q Consensus 64 IWDl~t~~~~v~~l~~H~-~~-V~slafsPdg~~LaSgs~-D-----g~I~IWDl~tgk~v~~~~h~~---~I~slafsP 132 (648)
+||..+..- ..+..-. .. -.+++. -++++++.|+. + ..+.+||+.+.+-...-.... ...++.+
T Consensus 121 ~~d~~~~~W--~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 195 (315)
T 4asc_A 121 CYDRLSFKW--GESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-- 195 (315)
T ss_dssp EEETTTTEE--EECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--
T ss_pred EECCCCCcE--eECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--
Confidence 999977642 2222111 11 112222 36677777776 2 368999998875433221111 1122222
Q ss_pred CCCEEEEEEcCC-----eEEEEECCCC
Q 006360 133 DDWILTAGTSNG-----RVVFYDIRGK 154 (648)
Q Consensus 133 dG~~Lasgs~DG-----~V~IWDl~s~ 154 (648)
++.+++.|+.++ .|.+||+.+.
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCEEEEEeccCCCCccceEEEEECCCC
Confidence 667777887654 4889999875
No 345
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=93.36 E-value=0.078 Score=41.49 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 613 ETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 613 ~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
..||..-.+.+..+..+|..||..|++|+.+|+++|
T Consensus 24 ~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk~~l 59 (62)
T 1jnm_A 24 IARLEEKVKTLKAQNSELASTANMLREQVAQLKQKV 59 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666667778888999999999999999999875
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.35 E-value=2.4 Score=42.84 Aligned_cols=143 Identities=15% Similarity=0.198 Sum_probs=72.7
Q ss_pred CCCCEEEEEEC----CC-------cEEEEECCCCceeEEEeC-CC-CCcEEEEEEccCCCeEEEEEeCC-------CeEE
Q 006360 4 CKDEHLASISL----SG-------DLILHNLASGAKAAELKD-PN-EQVLRVLDYSRNSRHLLVTAGDD-------GTLH 63 (648)
Q Consensus 4 pdG~~Lasgs~----DG-------~V~IwDl~sg~~i~~l~~-~~-~~~V~~Vafspdg~~lLaSgs~D-------g~V~ 63 (648)
.++..++.|+. ++ .+.+||..+.+-.. +.. .. ......+.+ ++. +++.|+.+ ..+.
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG-LPPLPSARCLFGLGEV--DDK-IYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE-CSCBSSCBCSCEEEEE--TTE-EEEEEEEBTTTCCEEEEEE
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE-CCCCCccccccceEEE--CCE-EEEEcCccCCCCcccceEE
Confidence 35667777773 12 17788876654322 211 01 111122222 444 77777754 3588
Q ss_pred EEECCCCCceeEEeccCCCCe--EEEEEccCCCEEEEEeCC------CeEEEEeCCCCceeeEee--CCCCeEEEEEeCC
Q 006360 64 LWDTTGRSPKVSWLKQHSAPT--AGISFSSDDKIIASVGLD------KKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDD 133 (648)
Q Consensus 64 IWDl~t~~~~v~~l~~H~~~V--~slafsPdg~~LaSgs~D------g~I~IWDl~tgk~v~~~~--h~~~I~slafsPd 133 (648)
+||..+..- ..+....... .+++. .++++++.|+.+ ..+.+||+.+.+-...-. ....-.+++. -+
T Consensus 131 ~yd~~~~~W--~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~ 206 (318)
T 2woz_A 131 CYDPVAAKW--SEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HK 206 (318)
T ss_dssp EEETTTTEE--EEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ET
T ss_pred EEeCCCCCE--eECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-EC
Confidence 889877652 2222111111 11222 367777777642 358999998876443321 1111112222 25
Q ss_pred CCEEEEEEcC-----CeEEEEECCCC
Q 006360 134 DWILTAGTSN-----GRVVFYDIRGK 154 (648)
Q Consensus 134 G~~Lasgs~D-----G~V~IWDl~s~ 154 (648)
+.+++.|+.+ ..|.+||+.+.
T Consensus 207 ~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 207 GKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp TEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CEEEEEcCcCCCCccceEEEEECCCC
Confidence 6777777653 34788998875
No 347
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.33 E-value=2.3 Score=46.13 Aligned_cols=102 Identities=15% Similarity=0.127 Sum_probs=59.4
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-eEEecc------CCCCeEEEEEccC---CCEEEEEeC-------
Q 006360 39 VLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK-VSWLKQ------HSAPTAGISFSSD---DKIIASVGL------- 101 (648)
Q Consensus 39 ~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~-v~~l~~------H~~~V~slafsPd---g~~LaSgs~------- 101 (648)
....++|.|+++ ++++-...+.|++++..++... +..+.. .......|+|+|+ +..|+.+..
T Consensus 28 ~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 28 KPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 446799999998 5665433347888886544321 222221 2345779999995 555554432
Q ss_pred ------CCeEEEEeCCCC--ce---eeE---ee--CCCCeEEEEEeCCCCEEEEEE
Q 006360 102 ------DKKLYTYDPGSR--RP---SSC---IT--YEAPFSSLAFIDDDWILTAGT 141 (648)
Q Consensus 102 ------Dg~I~IWDl~tg--k~---v~~---~~--h~~~I~slafsPdG~~Lasgs 141 (648)
...|.-|+...+ +. ..+ +. .......|+|.|||.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666655322 11 111 21 234578999999998766544
No 348
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.25 E-value=1.2 Score=44.93 Aligned_cols=140 Identities=11% Similarity=0.057 Sum_probs=74.3
Q ss_pred CCCEEEEEEC----C-----CcEEEEECCCCceeEEEeCC--CCCcEEEEEEccCCCeEEEEEeCC-----CeEEEEECC
Q 006360 5 KDEHLASISL----S-----GDLILHNLASGAKAAELKDP--NEQVLRVLDYSRNSRHLLVTAGDD-----GTLHLWDTT 68 (648)
Q Consensus 5 dG~~Lasgs~----D-----G~V~IwDl~sg~~i~~l~~~--~~~~V~~Vafspdg~~lLaSgs~D-----g~V~IWDl~ 68 (648)
++..++.|+. + ..+.+||+.+.+-. .+... .......+.+ +++ +++.|+.+ ..+.+||..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS-PCAPMSVPRNRIGVGVI--DGH-IYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEE-ECCCCSSCCBTCEEEEE--TTE-EEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEe-ECCCCCcCccccEEEEE--CCE-EEEEcCCCCCcccccEEEECCC
Confidence 4555566654 2 46888998765432 22211 1111122222 444 66766643 458899987
Q ss_pred CCCceeEEeccC---CCCeEEEEEccCCCEEEEEeCC-----CeEEEEeCCCCceeeEee--CC-CCeEEEEEeCCCCEE
Q 006360 69 GRSPKVSWLKQH---SAPTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCIT--YE-APFSSLAFIDDDWIL 137 (648)
Q Consensus 69 t~~~~v~~l~~H---~~~V~slafsPdg~~LaSgs~D-----g~I~IWDl~tgk~v~~~~--h~-~~I~slafsPdG~~L 137 (648)
+..- ..+... .....++.+ ++++++.|+.+ ..+.+||+.+.+-...-. .. ....++.+ ++.++
T Consensus 146 ~~~W--~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iy 219 (308)
T 1zgk_A 146 RDEW--HLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIY 219 (308)
T ss_dssp TTEE--EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEE
T ss_pred CCeE--eECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEE
Confidence 7652 222111 111122222 67777777765 368999998775433221 11 11222333 66777
Q ss_pred EEEEcC-----CeEEEEECCCC
Q 006360 138 TAGTSN-----GRVVFYDIRGK 154 (648)
Q Consensus 138 asgs~D-----G~V~IWDl~s~ 154 (648)
+.|+.+ ..|.+||+.+.
T Consensus 220 v~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 220 AAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp EECCBCSSSBCCCEEEEETTTT
T ss_pred EEeCCCCCCccceEEEEeCCCC
Confidence 777664 45999999875
No 349
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.09 E-value=0.13 Score=53.97 Aligned_cols=143 Identities=11% Similarity=0.111 Sum_probs=84.9
Q ss_pred CEEEEEECCCcEEEEECCCCceeEEEeCCC-CCcEEEEEE--ccCCCeEEEEE-eCCCeEEEEECCCCCceeEEecc---
Q 006360 7 EHLASISLSGDLILHNLASGAKAAELKDPN-EQVLRVLDY--SRNSRHLLVTA-GDDGTLHLWDTTGRSPKVSWLKQ--- 79 (648)
Q Consensus 7 ~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~-~~~V~~Vaf--spdg~~lLaSg-s~Dg~V~IWDl~t~~~~v~~l~~--- 79 (648)
.+++.++.||.|+-+|..+|+....++... ...+. ..- .+.+...++.. ..||.|+.+|..++..+...-..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~-~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIE-IQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEE-CCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEE-ecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 478889999999999999999999987531 12222 110 01122234333 58999999998776432211110
Q ss_pred CCCCeEE---EEE-c----cCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCe--------EEEEEe-----CCCCEEE
Q 006360 80 HSAPTAG---ISF-S----SDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPF--------SSLAFI-----DDDWILT 138 (648)
Q Consensus 80 H~~~V~s---laf-s----Pdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I--------~slafs-----PdG~~La 138 (648)
...++.. ..+ . -.+..+++++.++.+...|+++|+.+..+....+. .|.... ..+..|+
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 1111211 000 0 14567889999999999999999998887543221 122211 1245788
Q ss_pred EEEcCCeEEEEE
Q 006360 139 AGTSNGRVVFYD 150 (648)
Q Consensus 139 sgs~DG~V~IWD 150 (648)
.+..+..|.+.+
T Consensus 170 ig~~~y~v~~~~ 181 (339)
T 2be1_A 170 IGKTIFELGIHS 181 (339)
T ss_dssp EEEEEEECEECC
T ss_pred EecceEEEEEEC
Confidence 887777777776
No 350
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.08 E-value=12 Score=42.77 Aligned_cols=160 Identities=13% Similarity=0.081 Sum_probs=90.6
Q ss_pred EEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-----cCCC
Q 006360 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-----QHSA 82 (648)
Q Consensus 8 ~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~-----~H~~ 82 (648)
.|-.|..+| |.+||..+.+... ........|.++.. .++ .|..+..+ -|..||..+.. +..+. ....
T Consensus 75 ~lWigT~~G-l~~yd~~~~~f~~-~~~~~~~~i~~i~~-~~g--~lWigt~~-Gl~~~~~~~~~--~~~~~~~~~~l~~~ 146 (758)
T 3ott_A 75 YLYMGTDNG-ILVYNYRADRYEQ-PETDFPTDVRTMAL-QGD--TLWLGALN-GLYTYQLQSRK--LTSFDTRRNGLPNN 146 (758)
T ss_dssp EEEEEETTE-EEEEETTTTEECC-CSCCCCSCEEEEEE-ETT--EEEEEETT-EEEEEETTTCC--EEEECHHHHCCSCS
T ss_pred cEEEEeCCC-eEEEeCCCCEEEC-cccCCCceEEEEEe-cCC--cEEEEcCC-cceeEeCCCCe--EEEeccCCCCcCCC
Confidence 455555554 7888876654322 11112234666654 344 35556665 68889987665 23221 1234
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEe-e-----CCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCC
Q 006360 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-T-----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (648)
Q Consensus 83 ~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~-~-----h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~ 156 (648)
.|.++....++.+.+ ++.+ -|..+|..+++..... . ....|.++....++..|.+|+.+ -|..||..+..
T Consensus 147 ~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~-Gl~~~~~~~~~- 222 (758)
T 3ott_A 147 TIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG-YLFQYFPSTGQ- 222 (758)
T ss_dssp CEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEE-EEEEEETTTTE-
T ss_pred eEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECC-CCeEEcCCCCe-
Confidence 688888877777655 4544 4788898776543221 1 12248888888777766667654 58889987642
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCe
Q 006360 157 PLTVLRACSSSEAVSSLCWQRAKPV 181 (648)
Q Consensus 157 ~~~~l~~~~h~~~VtsLafspdg~~ 181 (648)
+..+... ....|.++....+|.+
T Consensus 223 -~~~~~~l-~~~~i~~i~~d~~g~l 245 (758)
T 3ott_A 223 -IKQTEAF-HNNSIKSLALDGNGDL 245 (758)
T ss_dssp -EEEEEEE-EEEEEEEEEECTTCCE
T ss_pred -EEeccCC-CCCeEEEEEEcCCCCE
Confidence 1111111 1234667766655444
No 351
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.97 E-value=4.2 Score=40.84 Aligned_cols=139 Identities=13% Similarity=0.113 Sum_probs=72.3
Q ss_pred EEEEEECCCcEEEEECCCCceeE-EEeCCCCCcEEEEEEccCCCeEEEEEeC-----C------CeEEEEECCCCCceeE
Q 006360 8 HLASISLSGDLILHNLASGAKAA-ELKDPNEQVLRVLDYSRNSRHLLVTAGD-----D------GTLHLWDTTGRSPKVS 75 (648)
Q Consensus 8 ~Lasgs~DG~V~IwDl~sg~~i~-~l~~~~~~~V~~Vafspdg~~lLaSgs~-----D------g~V~IWDl~t~~~~v~ 75 (648)
+++.|+ ..+.+||..+++-.. .+.......-.++ ...++. +++.|+. . ..+.+||..+.+- .
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~-~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W--~ 80 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSL-VTKENQ-VFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW--L 80 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEE-ECTTCC-EEEEEEEEECSSCSSSCEEEEEEEEETTTTEE--E
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEE-EEECCE-EEEEcCcccCCCCCccccccceEEecCCCCeE--E
Confidence 344555 579999998776432 2211112222332 334555 7777773 1 1277888877652 2
Q ss_pred EeccCCCCe--EEEEEccCCCEEEEEeCC--------CeEEEEeCCCCceeeEee--CCCCeEEEEEeCCCCEEEEEEc-
Q 006360 76 WLKQHSAPT--AGISFSSDDKIIASVGLD--------KKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAGTS- 142 (648)
Q Consensus 76 ~l~~H~~~V--~slafsPdg~~LaSgs~D--------g~I~IWDl~tgk~v~~~~--h~~~I~slafsPdG~~Lasgs~- 142 (648)
.+..-...- .+++.. ++++++.|+.+ ..+.+||..+.+-...-. ....-.+++. -++++++.|+.
T Consensus 81 ~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 158 (315)
T 4asc_A 81 GMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKG 158 (315)
T ss_dssp ECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBC
T ss_pred ECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCC
Confidence 222111111 122222 56777777742 368999998875333221 1111112222 35667777765
Q ss_pred C-----CeEEEEECCCC
Q 006360 143 N-----GRVVFYDIRGK 154 (648)
Q Consensus 143 D-----G~V~IWDl~s~ 154 (648)
+ ..+.+||+.+.
T Consensus 159 ~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTSCBCCCEEEEETTTT
T ss_pred CCCcccceEEEEeCCCC
Confidence 2 35899999875
No 352
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.93 E-value=3.4 Score=41.28 Aligned_cols=140 Identities=13% Similarity=0.095 Sum_probs=74.3
Q ss_pred EEEEEECC--CcEEEEECCCCceeEEEeCC--CCCcEEEEEEccCCCeEEEEEeCC----CeEEEEECCCCCceeE-Eec
Q 006360 8 HLASISLS--GDLILHNLASGAKAAELKDP--NEQVLRVLDYSRNSRHLLVTAGDD----GTLHLWDTTGRSPKVS-WLK 78 (648)
Q Consensus 8 ~Lasgs~D--G~V~IwDl~sg~~i~~l~~~--~~~~V~~Vafspdg~~lLaSgs~D----g~V~IWDl~t~~~~v~-~l~ 78 (648)
+++.|+.+ ..+.+||..+.+-. .+... ......++.+ ++. +++.|+.+ ..+.+||..+..-... .+.
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWT-DIRCPFEKRRDAACVFW--DNV-VYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEE-ECCCCSCCCBSCEEEEE--TTE-EEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred EEEEeCCCCCceEEEecCCCCCEe-cCCCCCcccceeEEEEE--CCE-EEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 45566543 57999998776532 22211 1111122222 444 77777755 6788999987652211 111
Q ss_pred cCCCCeEEEEEccCCCEEEEEeCC------CeEEEEeCCCCceeeEeeC--CCCeEEEEEeCCCCEEEEEEc--------
Q 006360 79 QHSAPTAGISFSSDDKIIASVGLD------KKLYTYDPGSRRPSSCITY--EAPFSSLAFIDDDWILTAGTS-------- 142 (648)
Q Consensus 79 ~H~~~V~slafsPdg~~LaSgs~D------g~I~IWDl~tgk~v~~~~h--~~~I~slafsPdG~~Lasgs~-------- 142 (648)
........+.+ ++++++.|+.+ ..+.+||+.+.+-...-.. ...-.+++. -++.+++.|+.
T Consensus 90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCE
T ss_pred ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCccc
Confidence 11111122222 67777888765 3689999988764333211 111112222 25666666653
Q ss_pred -CCeEEEEECCCC
Q 006360 143 -NGRVVFYDIRGK 154 (648)
Q Consensus 143 -DG~V~IWDl~s~ 154 (648)
-..+.+||+.+.
T Consensus 167 ~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 167 VLNSCEVYDPATE 179 (306)
T ss_dssp ECCCEEEEETTTT
T ss_pred ccceEEEeCCCCC
Confidence 345889999875
No 353
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.84 E-value=3.4 Score=43.21 Aligned_cols=139 Identities=12% Similarity=0.103 Sum_probs=96.5
Q ss_pred CCeEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEE
Q 006360 59 DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (648)
Q Consensus 59 Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~La 138 (648)
+..|.|-|+.......+.-..- -+.-.+|..+.|+.-. ...|.++|+++.+.+..+.....|..-.|-.+ +.|+
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~A----dsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~-~~L~ 121 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVA 121 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCC----SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSS-SEEE
T ss_pred CCEEEEEECCCCCCcccccccc----ceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCC-CeEE
Confidence 3478888987765433332222 2234588888887765 67899999999998888888889998899765 4566
Q ss_pred EEEcCCeEEEEECCCCCCceEEEeecCC--CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 139 AGTSNGRVVFYDIRGKPQPLTVLRACSS--SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 139 sgs~DG~V~IWDl~s~~~~~~~l~~~~h--~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
..+. ..|+-|++.+...|.+++..+.. ...|..-..+++.+|++..|-......+ .|.+.+|...
T Consensus 122 lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v-----~G~mQLYS~e 188 (365)
T 2xzh_A 122 LVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV-----VGAMQLYSVD 188 (365)
T ss_dssp EEES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEE-----EEEEEEEETT
T ss_pred EEcC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCcc-----ceeEEEEeec
Confidence 5554 46999999987788888885422 3567788889999998776432222211 3566776554
No 354
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.67 E-value=2.1 Score=44.52 Aligned_cols=143 Identities=10% Similarity=0.101 Sum_probs=78.1
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc-eeE----EeccCCCCeEEEEEccC---CCEEEEEe-C-------CC
Q 006360 40 LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP-KVS----WLKQHSAPTAGISFSSD---DKIIASVG-L-------DK 103 (648)
Q Consensus 40 V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~-~v~----~l~~H~~~V~slafsPd---g~~LaSgs-~-------Dg 103 (648)
...|+|.|+++. |+.+...|.|++++..+... .+. ...........|+|+|+ +..|+.+. . ..
T Consensus 20 P~~i~~~pdG~~-l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 20 PWALAFLPDNHG-MLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp EEEEEECSTTCC-EEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred cEEEEEcCCCCE-EEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 467999999974 44556789999998643211 011 11122345789999995 45554443 2 23
Q ss_pred eEEEEeCCCC--ce--ee-Ee---e----CCCCeEEEEEeCCCCEEEEEEc-------------CCeEEEEECCCCC---
Q 006360 104 KLYTYDPGSR--RP--SS-CI---T----YEAPFSSLAFIDDDWILTAGTS-------------NGRVVFYDIRGKP--- 155 (648)
Q Consensus 104 ~I~IWDl~tg--k~--v~-~~---~----h~~~I~slafsPdG~~Lasgs~-------------DG~V~IWDl~s~~--- 155 (648)
.|..|++..+ +. .. ++ . .......++|.|||.+.++-+. .|.|.-+|.....
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~ 178 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD 178 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence 5666766433 11 11 11 1 1122467999999954444322 2467777776431
Q ss_pred C--------ceEEEeecCCCCCeeEEEEcc-CCCeEEEe
Q 006360 156 Q--------PLTVLRACSSSEAVSSLCWQR-AKPVFIDE 185 (648)
Q Consensus 156 ~--------~~~~l~~~~h~~~VtsLafsp-dg~~Las~ 185 (648)
. ...++. .+| .....++|++ +|.+.++.
T Consensus 179 npf~~~~~~~~~i~a-~G~-rnp~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 179 NPFIKESGVRAEIWS-YGI-RNPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp CTTTTSTTSCTTEEE-ECC-SEEEEEEEETTTTEEEEEE
T ss_pred CCCcCCCCCCccEEE-EcC-cCccceEEECCCCCEEEEe
Confidence 0 112222 133 3467899998 55554443
No 355
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.65 E-value=1.5 Score=48.89 Aligned_cols=115 Identities=10% Similarity=0.012 Sum_probs=76.6
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCC-----------CceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEE
Q 006360 40 LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR-----------SPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTY 108 (648)
Q Consensus 40 V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~-----------~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IW 108 (648)
.+.+.++|||+++++++--+.+|.++|++.- +..+..-..-.-.....+|.++|+...+.--|..|.-|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEE
Confidence 3557899999988888888999999998631 11112222233456889999999666777789999999
Q ss_pred eCCCC----------ceeeEeeCCCCeEEEEE------eCCCCEEEEEEc---CCe----------EEEEECCCC
Q 006360 109 DPGSR----------RPSSCITYEAPFSSLAF------IDDDWILTAGTS---NGR----------VVFYDIRGK 154 (648)
Q Consensus 109 Dl~tg----------k~v~~~~h~~~I~slaf------sPdG~~Lasgs~---DG~----------V~IWDl~s~ 154 (648)
++... ..+..+.....+--+.- .+||++|++... |+. -.++|+...
T Consensus 405 ni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsGd 479 (638)
T 3sbq_A 405 NMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISGD 479 (638)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSSS
T ss_pred eccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCCC
Confidence 98642 23444443333333333 468999998764 443 367777654
No 356
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=92.56 E-value=1.1 Score=37.64 Aligned_cols=33 Identities=21% Similarity=0.139 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006360 615 QMSNVMSSILENQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 615 e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
+.-.-+.++..++..|+.||++|++||+.-|+.
T Consensus 62 ~~~~~v~eLe~everL~~ENq~L~~e~~~~~~~ 94 (104)
T 3s9g_A 62 RLDARVRELELELDRLRAENLQLLTENELHRQQ 94 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 334456778888999999999999999998863
No 357
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=92.15 E-value=0.17 Score=38.89 Aligned_cols=36 Identities=8% Similarity=0.292 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 613 ETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 613 ~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
+.|.-..|+++.++++.|.+||+.|++||++|.+-|
T Consensus 22 ~~EVD~FLd~v~~~~~~l~~e~~~L~~~~~~l~~~l 57 (57)
T 2wuj_A 22 EDEVNEFLAQVRKDYEIVLRKKTELEAKVNELDERI 57 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 467888899999999999999999999999987643
No 358
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=91.85 E-value=0.25 Score=38.68 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 614 TQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 614 ~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
.||..-.+.+..+..+|.+||..|++|+++|+.+|
T Consensus 26 ~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l 60 (63)
T 2wt7_A 26 DTLQAETDQLEDEKSALQTEIANLLKEKEKLEFIL 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666677778888999999999999999999874
No 359
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.79 E-value=1.2 Score=44.87 Aligned_cols=141 Identities=12% Similarity=0.045 Sum_probs=74.3
Q ss_pred CCCEEEEEECC-----CcEEEEECCCCceeE--EEeCCCCCcEEEEEEccCCCeEEEEEeCC-----CeEEEEECCCCCc
Q 006360 5 KDEHLASISLS-----GDLILHNLASGAKAA--ELKDPNEQVLRVLDYSRNSRHLLVTAGDD-----GTLHLWDTTGRSP 72 (648)
Q Consensus 5 dG~~Lasgs~D-----G~V~IwDl~sg~~i~--~l~~~~~~~V~~Vafspdg~~lLaSgs~D-----g~V~IWDl~t~~~ 72 (648)
+++.++.|+.+ ..+.+||+.+.+-.. .+.. ......++.+ ++. +++.|+.+ ..+.+||+.+..-
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W 196 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLT-RRIGVGVAVL--NRL-LYAVGGFDGTNRLNSAECYYPERNEW 196 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCc-cccceEEEEE--CCE-EEEEeCCCCCCcCceEEEEeCCCCeE
Confidence 45556666543 358888987654322 1111 1111122222 444 77777654 4588999877652
Q ss_pred eeEEeccC---CCCeEEEEEccCCCEEEEEeCC-----CeEEEEeCCCCceeeEeeCCC--CeEEEEEeCCCCEEEEEEc
Q 006360 73 KVSWLKQH---SAPTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCITYEA--PFSSLAFIDDDWILTAGTS 142 (648)
Q Consensus 73 ~v~~l~~H---~~~V~slafsPdg~~LaSgs~D-----g~I~IWDl~tgk~v~~~~h~~--~I~slafsPdG~~Lasgs~ 142 (648)
..+... .....++.+ ++++++.|+.+ ..+.+||+.+.+-...-.... .-.+++.. ++.+++.|+.
T Consensus 197 --~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~ 271 (308)
T 1zgk_A 197 --RMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH-QGRIYVLGGY 271 (308)
T ss_dssp --EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCB
T ss_pred --eeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE-CCEEEEEcCc
Confidence 222111 111222222 67777777765 469999998876443321111 11122222 5677777765
Q ss_pred C-----CeEEEEECCCC
Q 006360 143 N-----GRVVFYDIRGK 154 (648)
Q Consensus 143 D-----G~V~IWDl~s~ 154 (648)
+ ..|.+||+.+.
T Consensus 272 ~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 272 DGHTFLDSVECYDPDTD 288 (308)
T ss_dssp CSSCBCCEEEEEETTTT
T ss_pred CCCcccceEEEEcCCCC
Confidence 4 35788888765
No 360
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.61 E-value=1.7 Score=43.83 Aligned_cols=143 Identities=11% Similarity=0.115 Sum_probs=73.0
Q ss_pred CCCEEEEEECC-------CcEEEEECCCCceeEEEeCCCCCc-EEEEEEccCCCeEEEEEeC------CCeEEEEECCCC
Q 006360 5 KDEHLASISLS-------GDLILHNLASGAKAAELKDPNEQV-LRVLDYSRNSRHLLVTAGD------DGTLHLWDTTGR 70 (648)
Q Consensus 5 dG~~Lasgs~D-------G~V~IwDl~sg~~i~~l~~~~~~~-V~~Vafspdg~~lLaSgs~------Dg~V~IWDl~t~ 70 (648)
++..++.|+.+ ..+.+||+.+.+-.. +....... -.+++. .++. +++.|+. -..+.+||+.+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSE-VKNLPIKVYGHNVIS-HNGM-IYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEE-ECCCSSCEESCEEEE-ETTE-EEEECCEESSSCBCCCEEEEETTTT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeE-CCCCCCcccccEEEE-ECCE-EEEEcCCCCCCCccceEEEEcCCCC
Confidence 45566677654 258888987654322 21111111 111222 3444 6666653 235899999876
Q ss_pred CceeEEeccC--CCCeEEEEEccCCCEEEEEeCCC-----eEEEEeCCCCceeeEeeCCC--CeEEEEEeCCCCEEEEEE
Q 006360 71 SPKVSWLKQH--SAPTAGISFSSDDKIIASVGLDK-----KLYTYDPGSRRPSSCITYEA--PFSSLAFIDDDWILTAGT 141 (648)
Q Consensus 71 ~~~v~~l~~H--~~~V~slafsPdg~~LaSgs~Dg-----~I~IWDl~tgk~v~~~~h~~--~I~slafsPdG~~Lasgs 141 (648)
.- ..+... ...-.+++.. ++++++.|+.++ .+.+||+.+.+-...-.... .-.+++. -++.+++.|+
T Consensus 186 ~W--~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG 261 (318)
T 2woz_A 186 DW--KDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS-LAGSLYAIGG 261 (318)
T ss_dssp EE--EEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE-ETTEEEEECC
T ss_pred EE--EECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE-ECCEEEEECC
Confidence 52 222211 1111122222 677777776543 57889998876433321111 1112222 2566777776
Q ss_pred cC--------------CeEEEEECCCC
Q 006360 142 SN--------------GRVVFYDIRGK 154 (648)
Q Consensus 142 ~D--------------G~V~IWDl~s~ 154 (648)
.+ ..|.+||+.+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 262 FAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp BCCBC----CCBCCBCCCEEEEETTTT
T ss_pred eeccCCCCceeccceeeeEEEEeCCCC
Confidence 53 34788888765
No 361
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=91.50 E-value=0.21 Score=39.19 Aligned_cols=43 Identities=23% Similarity=0.321 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 603 IEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 603 ~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
-+-.|.++.=+.+- ++++..++++|..||..|+.|+++||++|
T Consensus 18 reAArrsR~RK~~~---~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 18 TEAARRSRARKLQR---MKQLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666544433 34556667889999999999999999875
No 362
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.49 E-value=4.1 Score=42.68 Aligned_cols=109 Identities=17% Similarity=0.197 Sum_probs=66.1
Q ss_pred eccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeE--e-----eCCCCeEEEEEeCC---CCEEEEE-E--cC
Q 006360 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC--I-----TYEAPFSSLAFIDD---DWILTAG-T--SN 143 (648)
Q Consensus 77 l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~--~-----~h~~~I~slafsPd---G~~Lasg-s--~D 143 (648)
+...-...+.|+|.||+.++++--..|.|++++...++.... + ........|+|+|+ +.+|++. + .+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 334445678999999999777766689999998766654222 1 13556889999995 3445443 2 34
Q ss_pred CeEEEEECCCCC-------CceEEEeec--CCCCCeeEEEEccCCCeEEEe
Q 006360 144 GRVVFYDIRGKP-------QPLTVLRAC--SSSEAVSSLCWQRAKPVFIDE 185 (648)
Q Consensus 144 G~V~IWDl~s~~-------~~~~~l~~~--~h~~~VtsLafspdg~~Las~ 185 (648)
+.|.-|.+.... ....++... ........|.|.|||.+.++.
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~ 157 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGT 157 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEEC
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEE
Confidence 567777665421 122222211 112234568888887655554
No 363
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=91.49 E-value=0.21 Score=46.81 Aligned_cols=31 Identities=26% Similarity=0.348 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 616 MSNVMSSILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 616 ~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
|++++.--++..++|..||..|.+||+||.+
T Consensus 152 irELi~~~L~~i~~L~a~N~hLqkENeRL~~ 182 (186)
T 3q4f_C 152 IRELICYCLDTIAENQAKNEHLQKENERLLR 182 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666678889999999999999999976
No 364
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.45 E-value=3.7 Score=41.96 Aligned_cols=94 Identities=13% Similarity=0.017 Sum_probs=44.3
Q ss_pred CeEEEEECCCCCceeEEeccCCCCe-EEEEEccCCCEEEEEeC------CCeEEEEeC--CCCceeeEeeC--CC-CeEE
Q 006360 60 GTLHLWDTTGRSPKVSWLKQHSAPT-AGISFSSDDKIIASVGL------DKKLYTYDP--GSRRPSSCITY--EA-PFSS 127 (648)
Q Consensus 60 g~V~IWDl~t~~~~v~~l~~H~~~V-~slafsPdg~~LaSgs~------Dg~I~IWDl--~tgk~v~~~~h--~~-~I~s 127 (648)
..+.+||..+..-....-....... .+++.. ++++++.|+. ...+.+||+ .+.+-...-.. .. ....
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 5789999977653211111111111 223332 5667777664 235778887 44432222111 11 1111
Q ss_pred EEEeCCCCEEEEEEcC----------------------CeEEEEECCCC
Q 006360 128 LAFIDDDWILTAGTSN----------------------GRVVFYDIRGK 154 (648)
Q Consensus 128 lafsPdG~~Lasgs~D----------------------G~V~IWDl~s~ 154 (648)
.+...++.+++.|+.+ ..+.+||+.+.
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~ 295 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG 295 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC--
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC
Confidence 1222356677777632 24788998865
No 365
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=91.43 E-value=0.24 Score=37.81 Aligned_cols=29 Identities=28% Similarity=0.299 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
++++..+++.|.+||.+|++|+++|++.+
T Consensus 24 ~~~LE~~v~~L~~eN~~L~~~~~~L~~~~ 52 (55)
T 1dh3_A 24 VKSLENRVAVLENQNKTLIEELKALKDLY 52 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45556667889999999999999998763
No 366
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.17 E-value=21 Score=40.58 Aligned_cols=164 Identities=14% Similarity=0.115 Sum_probs=93.3
Q ss_pred EEEEEECCCcEEEEECCCCceeEEEe----CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC---
Q 006360 8 HLASISLSGDLILHNLASGAKAAELK----DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH--- 80 (648)
Q Consensus 8 ~Lasgs~DG~V~IwDl~sg~~i~~l~----~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H--- 80 (648)
.|..+..+ -|..||..+++.. .+. ......|.++....++. |..+..+ -|..||..+...........
T Consensus 114 ~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~ 188 (758)
T 3ott_A 114 TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQ--IYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQ 188 (758)
T ss_dssp EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCC--EEEEETT-EEEEEETTTTEEEEECCCCCTTC
T ss_pred cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCC--EEEEeCC-CHhhCccCCCceEEecCCCcccc
Confidence 34445554 5778887655433 231 11234677777777776 4445554 47788877654211111111
Q ss_pred -CCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee-CCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCCCCCce
Q 006360 81 -SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (648)
Q Consensus 81 -~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~-h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s~~~~~ 158 (648)
...|.++....++..|..|.. +-|..+|..+++...... ....|.++....+|.+. +|+.+| |.+||..+.. +
T Consensus 189 ~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igT~~G-l~~~~~~~~~--~ 263 (758)
T 3ott_A 189 SNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLL-AGTDNG-LYVYHNDTTP--L 263 (758)
T ss_dssp SSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEE-EEETTE-EEEECCTTSC--C
T ss_pred ccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEE-EEeCCc-eeEEecCCCc--E
Confidence 224888888777776666664 458889988765433221 23357888887777654 455554 8888877642 2
Q ss_pred EEEeec------CCCCCeeEEEEccCCCe
Q 006360 159 TVLRAC------SSSEAVSSLCWQRAKPV 181 (648)
Q Consensus 159 ~~l~~~------~h~~~VtsLafspdg~~ 181 (648)
..+... -....|.++..+.+|.+
T Consensus 264 ~~~~~~~~~~~~l~~~~i~~i~~D~~g~l 292 (758)
T 3ott_A 264 QHIIHDSRNIQSLTNNIIWNIFADQEHNI 292 (758)
T ss_dssp EEECCCTTCTTSCSCSCEEEEEECTTCCE
T ss_pred EEEEcCCCCcCcCCcCeEEEEEEcCCCCE
Confidence 222210 11245788877776654
No 367
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=91.13 E-value=2.2 Score=37.81 Aligned_cols=56 Identities=14% Similarity=0.265 Sum_probs=39.9
Q ss_pred HHHHHHhHHhHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006360 592 KSIHEDMRNLHIE---ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 592 ~~~~~~~~~lh~~---~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
..++.++.+|++| .+.|+..+=++|..-+++...-..+...|+..||.|++.||++
T Consensus 25 e~lk~ele~l~~E~q~~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~l~~~ 83 (120)
T 3i00_A 25 SGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDELRRQ 83 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666666665 4566666666777777766666677788899999999988765
No 368
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=90.97 E-value=0.33 Score=33.01 Aligned_cols=21 Identities=33% Similarity=0.461 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 006360 627 QAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 627 ~~~l~~e~~~lr~e~~~lr~~ 647 (648)
+..-.+||.+||+||.+|..|
T Consensus 16 ie~KdeeIa~Lk~eN~eL~El 36 (37)
T 1t6f_A 16 IEQKDNEIARLKKENKELAEV 36 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhHHHHhh
Confidence 344457899999999999865
No 369
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=90.33 E-value=5.8 Score=43.03 Aligned_cols=139 Identities=12% Similarity=0.110 Sum_probs=95.2
Q ss_pred CCeEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEEE
Q 006360 59 DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (648)
Q Consensus 59 Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~La 138 (648)
+..|.|-|+..+....+.-.. .-+.-.+|..+.|+.-. ..++.|+|+++...+..+.....|..-.|-.+ +.|+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~----AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~-~~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPIS----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECC----CSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET-TEEE
T ss_pred CCeEEEEECCCCCcceecccc----cceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC-CeEE
Confidence 347888888766543332221 12344688778777665 67999999999998888887888888888765 4566
Q ss_pred EEEcCCeEEEEECCCCCCceEEEeecCC--CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 139 AGTSNGRVVFYDIRGKPQPLTVLRACSS--SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 139 sgs~DG~V~IWDl~s~~~~~~~l~~~~h--~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
..+. ..|+-|++.+...|.+++..+.. ...|..-..+++.+|++..|-...... ..|.+.+|.+.
T Consensus 121 lVT~-taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~-----v~G~mQLYS~e 187 (494)
T 1bpo_A 121 LVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNR-----VVGAMQLYSVD 187 (494)
T ss_dssp EECS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTE-----EEEEEEEEEST
T ss_pred EEcC-CeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCc-----ccceEEEeecc
Confidence 5554 56999999887788888885422 356788888999999876643222221 14566777554
No 370
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=90.15 E-value=2.6 Score=43.14 Aligned_cols=137 Identities=12% Similarity=0.031 Sum_probs=63.3
Q ss_pred CcEEEEECCCCceeE--EEeCCCCCcEEEEEEccCCCeEEEEEeC------CCeEEEEECCCCCceeEEeccC--C-CCe
Q 006360 16 GDLILHNLASGAKAA--ELKDPNEQVLRVLDYSRNSRHLLVTAGD------DGTLHLWDTTGRSPKVSWLKQH--S-APT 84 (648)
Q Consensus 16 G~V~IwDl~sg~~i~--~l~~~~~~~V~~Vafspdg~~lLaSgs~------Dg~V~IWDl~t~~~~v~~l~~H--~-~~V 84 (648)
..+.+||+.+.+-.. .+....... .+++.. +++ +++.|+. ...+.+||++........+... . ...
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~-~~~~~~-~~~-iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~ 244 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAG-AAVVNK-GDK-TWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVA 244 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBS-CEEEEE-TTE-EEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCB
T ss_pred ccEEEEeCCCCcEEECCCCCCCCccc-ccEEEE-CCE-EEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccc
Confidence 478999987654322 222111111 222222 344 6666653 3457788873222112222211 1 111
Q ss_pred EEEEEccCCCEEEEEeCC----------------------CeEEEEeCCCCceeeEeeCC-CCeEEEEEeCCCCEEEEEE
Q 006360 85 AGISFSSDDKIIASVGLD----------------------KKLYTYDPGSRRPSSCITYE-APFSSLAFIDDDWILTAGT 141 (648)
Q Consensus 85 ~slafsPdg~~LaSgs~D----------------------g~I~IWDl~tgk~v~~~~h~-~~I~slafsPdG~~Lasgs 141 (648)
.+.+...++++++.|+.+ ..+.+||+.+.+-...-... ......+..-++++++.|+
T Consensus 245 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 324 (357)
T 2uvk_A 245 GGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGG 324 (357)
T ss_dssp SCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEE
T ss_pred cceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEee
Confidence 111222367777777642 25789999876543332211 1111112223677888888
Q ss_pred cCC------eEEEEECCCCC
Q 006360 142 SNG------RVVFYDIRGKP 155 (648)
Q Consensus 142 ~DG------~V~IWDl~s~~ 155 (648)
.++ .|.++++++++
T Consensus 325 ~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 325 ETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp ECGGGCEEEEEEEEEC-CCS
T ss_pred eCCCCCEeeeEEEEEEcCcE
Confidence 653 36677888764
No 371
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=90.02 E-value=0.33 Score=46.14 Aligned_cols=29 Identities=28% Similarity=0.345 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 618 NVMSSILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 618 ~~~~~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
++++-..+.+++|.++|++|.+||+||++
T Consensus 145 elid~~ld~~~~L~~~n~~LqkeNeRL~~ 173 (184)
T 3w03_C 145 ELICYCLDTIAENQAKNEHLQKENERLLR 173 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566677788888888888888875
No 372
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=89.33 E-value=1.8 Score=49.72 Aligned_cols=146 Identities=14% Similarity=0.136 Sum_probs=79.0
Q ss_pred CCCEEEEEECC------CcEEEEECCCCceeEEEeC-CCCCcEEEEEEccCCCeEEEEEeCCC--eEEEEECCCCCceeE
Q 006360 5 KDEHLASISLS------GDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVS 75 (648)
Q Consensus 5 dG~~Lasgs~D------G~V~IwDl~sg~~i~~l~~-~~~~~V~~Vafspdg~~lLaSgs~Dg--~V~IWDl~t~~~~v~ 75 (648)
+++.++.||.+ +.+.+||..+.+-.. +.. .....-++++...++. +++.|+.++ .+.+||..+... .
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~-~~~~p~~R~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~W--~ 526 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSM-IKSLSHTRFRHSACSLPDGN-VLILGGVTEGPAMLLYNVTEEIF--K 526 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEE-CCCCSBCCBSCEEEECTTSC-EEEECCBCSSCSEEEEETTTTEE--E
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEE-CCCCCCCcccceEEEEcCCE-EEEECCCCCCCCEEEEECCCCce--E
Confidence 56666777654 358888987643221 111 1111112233323555 777777654 699999987652 2
Q ss_pred Eecc------CCCCeEEEEEccC-CCEEEEEeC--C-----CeEEEEeCCCCc------eeeEeeC--CCC-eEEEEEeC
Q 006360 76 WLKQ------HSAPTAGISFSSD-DKIIASVGL--D-----KKLYTYDPGSRR------PSSCITY--EAP-FSSLAFID 132 (648)
Q Consensus 76 ~l~~------H~~~V~slafsPd-g~~LaSgs~--D-----g~I~IWDl~tgk------~v~~~~h--~~~-I~slafsP 132 (648)
.+.. ......++.+..+ +++++.|+. + ..+.+||+.+.. -...... ... -.+++...
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~ 606 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYIT 606 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEE
T ss_pred EccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeC
Confidence 2221 1111233555554 667777766 2 368999998877 2222111 111 11233333
Q ss_pred CCCEEEEEEcC--------CeEEEEECCCC
Q 006360 133 DDWILTAGTSN--------GRVVFYDIRGK 154 (648)
Q Consensus 133 dG~~Lasgs~D--------G~V~IWDl~s~ 154 (648)
++.+++.|+.+ ..|.+||+.+.
T Consensus 607 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 607 PRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp TTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred CCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 36777777743 45999999875
No 373
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.30 E-value=25 Score=39.24 Aligned_cols=191 Identities=9% Similarity=0.033 Sum_probs=108.5
Q ss_pred CCCCEEEEEEC-CCcEEEEECCCCceeEEEeCCCCCcEEEEEEc--cCCCeEEEEEeC-------CCeE---------EE
Q 006360 4 CKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYS--RNSRHLLVTAGD-------DGTL---------HL 64 (648)
Q Consensus 4 pdG~~Lasgs~-DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafs--pdg~~lLaSgs~-------Dg~V---------~I 64 (648)
.||++|+.-.. +..|...++...++-..+...+...++.++|- |+-. ++++++. ||.. .+
T Consensus 140 yDGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~-yv~~~~e~~~P~pndg~~~~~~~~~~y~~ 218 (638)
T 3sbq_A 140 YDGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTK-YVFANAEFIIPHPNDGKVFDLQDENSYTM 218 (638)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCC-EEEEEECSCEESSCSSSCCCTTSTTEEEE
T ss_pred eeeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCcc-EEEecceeeccCCCCCcccccCChhhceE
Confidence 36788877764 56788999999998887877788889999987 5666 4555443 3221 11
Q ss_pred E---ECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCC---------------e----------------------
Q 006360 65 W---DTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDK---------------K---------------------- 104 (648)
Q Consensus 65 W---Dl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg---------------~---------------------- 104 (648)
| |..+-+...+.+. ....-.+...+++++.++.+.+. .
T Consensus 219 f~~iD~~tm~v~~Qv~v--~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~ 296 (638)
T 3sbq_A 219 YNAIDAETMEMAFQVIV--DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLG 296 (638)
T ss_dssp EEEEETTTCSEEEEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCT
T ss_pred EEEEcCCccEEEEEEEc--CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEEC
Confidence 1 1122211111111 11223345566777777655421 2
Q ss_pred ---EEEEeCCC----C-ceeeEeeCCCCeEEEEEeCCCCEEEEEE-cCCeEEEEECCCCCC--------ce-EEEeecCC
Q 006360 105 ---LYTYDPGS----R-RPSSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQ--------PL-TVLRACSS 166 (648)
Q Consensus 105 ---I~IWDl~t----g-k~v~~~~h~~~I~slafsPdG~~Lasgs-~DG~V~IWDl~s~~~--------~~-~~l~~~~h 166 (648)
|.+.|.+. + ..+..+........+.++|||+++++++ .+.+|.|+|+..... +. .+.....-
T Consensus 297 g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~ 376 (638)
T 3sbq_A 297 DSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL 376 (638)
T ss_dssp TCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC
T ss_pred CCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC
Confidence 34444443 1 1223334444456788999999988766 478899999984110 10 11111122
Q ss_pred CCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 167 SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 167 ~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
.-.....+|+++| ..+.+--.|..|..|++.
T Consensus 377 GlGPlHt~Fd~~G------------~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 377 GLGPLHTTFDGRG------------NAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp CSCEEEEEECSSS------------EEEEEETTTTEEEEEEHH
T ss_pred CCcccEEEECCCC------------ceEeeeeecceEEEEecc
Confidence 3345567887765 233333458888888775
No 374
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=89.21 E-value=0.21 Score=37.80 Aligned_cols=45 Identities=16% Similarity=0.240 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006360 603 IEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 603 ~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
||-|||+.+-..-...=++.+..++++|..+++.|+++|+.|++-
T Consensus 4 lefIk~~LG~~~p~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~ 48 (53)
T 2yy0_A 4 LDFLKHHLGAATPENPEIELLRLELAEMKEKYEAIVEENKKLKAK 48 (53)
T ss_dssp ------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566554211111223344455778888888888888888764
No 375
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=89.20 E-value=5 Score=32.60 Aligned_cols=34 Identities=24% Similarity=0.432 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 615 QMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 615 e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
-+..+|+.+..++++|.++|.-|++.++.|=++|
T Consensus 43 KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~~~l 76 (78)
T 3iv1_A 43 KLEEMVTRLDQEVAEVDKNIELLKKKDEELSSAL 76 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3667788888899999999999999999986653
No 376
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=88.50 E-value=0.58 Score=32.17 Aligned_cols=31 Identities=23% Similarity=0.281 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 615 QMSNVMSSILENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 615 e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr 645 (648)
|-+--++++.+.+..|.++++.|++|-.||=
T Consensus 5 ee~mTLeEtkeQi~~l~~kl~~LkeEKHQLF 35 (38)
T 2l5g_A 5 EERMSLEETKEQILKLEEKLLALQEEKHQLF 35 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344458999999999999999999999983
No 377
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=88.42 E-value=1.1 Score=36.70 Aligned_cols=10 Identities=40% Similarity=0.843 Sum_probs=5.8
Q ss_pred HHHHHHHHHh
Q 006360 637 LRKENHQLRQ 646 (648)
Q Consensus 637 lr~e~~~lr~ 646 (648)
|++||+||++
T Consensus 53 L~~en~qLk~ 62 (81)
T 2jee_A 53 LERENNHLKE 62 (81)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5556666654
No 378
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=88.41 E-value=26 Score=36.35 Aligned_cols=139 Identities=10% Similarity=-0.043 Sum_probs=70.6
Q ss_pred CEEEEEECCCcEEEEECCC-CceeEEE-eCCCCCcEEEEEEccCCCeEEEEEeCCC----eEEEEECCCCCceeEEecc-
Q 006360 7 EHLASISLSGDLILHNLAS-GAKAAEL-KDPNEQVLRVLDYSRNSRHLLVTAGDDG----TLHLWDTTGRSPKVSWLKQ- 79 (648)
Q Consensus 7 ~~Lasgs~DG~V~IwDl~s-g~~i~~l-~~~~~~~V~~Vafspdg~~lLaSgs~Dg----~V~IWDl~t~~~~v~~l~~- 79 (648)
..|.+|...| +.+++... ++....+ .......|.+|++.|.....|+++...+ .|...+ +.+.. ...+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~t-W~~~~~~ 99 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGN-WTEATRP 99 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSC-CEECSBC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCC-ceECCcc
Confidence 3677777777 66665433 2322222 1124567899999982212344454444 444432 22221 111111
Q ss_pred -------------CCCCeEEEEEcc-C-CCEEEEEeCCCeEEEEeCCCCceeeEee--------------------CCCC
Q 006360 80 -------------HSAPTAGISFSS-D-DKIIASVGLDKKLYTYDPGSRRPSSCIT--------------------YEAP 124 (648)
Q Consensus 80 -------------H~~~V~slafsP-d-g~~LaSgs~Dg~I~IWDl~tgk~v~~~~--------------------h~~~ 124 (648)
+...|.+|++.| + ...|+.+...+.|...+-. ++....+. ....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCCCCCc
Confidence 112477899987 3 5666666666666655422 22222221 1234
Q ss_pred eEEEEEeCC-CCEEEEEEcCCeEEEE
Q 006360 125 FSSLAFIDD-DWILTAGTSNGRVVFY 149 (648)
Q Consensus 125 I~slafsPd-G~~Lasgs~DG~V~IW 149 (648)
|.+|.++|. ...|+++..++.|+..
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEE
Confidence 788999873 4556666555545544
No 379
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=87.93 E-value=1.6 Score=35.72 Aligned_cols=21 Identities=33% Similarity=0.461 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 006360 627 QAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 627 ~~~l~~e~~~lr~e~~~lr~~ 647 (648)
+..|.+||..|++||++||.+
T Consensus 55 ie~l~eEi~~lk~en~eL~el 75 (83)
T 1uii_A 55 IEQKDNEIARLKKENKELAEV 75 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 455778888888888888875
No 380
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=87.47 E-value=2.9 Score=39.41 Aligned_cols=66 Identities=14% Similarity=0.221 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhHHHH---HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 579 FQRTLEETLDSFQKSIHEDMRNLHIEI---LRQFHMQ----ETQMSNVMSSILENQAELMKEIKSLRKENHQL 644 (648)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~lh~~~---~r~~~~~----~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~l 644 (648)
||.+|.+.-+..++.+++.+-...-+| ||+|+.. +.+|..+++.+..+.+.|.++++.|+++...+
T Consensus 17 Lq~~i~~l~~~~~~~~~e~l~~~q~~lq~sl~~~~~~l~~g~~~L~~~~~~Le~~~~~L~~~i~~l~~~~~k~ 89 (174)
T 2p22_A 17 LQTVVNELYREDVDYVADKILTRQTVMQESIARFHEIIAIDKNHLRAVEQAIEQTMHSLNAQIDVLTANRAKV 89 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444555555555444444 7888876 56788888999999999999999999855544
No 381
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=87.03 E-value=1 Score=49.28 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006360 615 QMSNVMSSILENQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 615 e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
|+...++....+.++..+|+++||+||++|+.+
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (487)
T 3oja_A 425 EQQSVQNNAIRDWDMYQHKETQLAEENARLKKL 457 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhh
Confidence 333444444455556667778888888888765
No 382
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=86.28 E-value=0.59 Score=39.97 Aligned_cols=22 Identities=23% Similarity=0.371 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 006360 625 ENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 625 ~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
+.+..|++||+.|+.||++||+
T Consensus 12 e~~~~lr~ei~~Le~E~~rLr~ 33 (100)
T 1go4_E 12 EEADTLRLKVEELEGERSRLEE 33 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3466677777777777777765
No 383
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=86.25 E-value=2.5 Score=36.87 Aligned_cols=67 Identities=18% Similarity=0.356 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhH---------HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 579 FQRTLEETLDSFQKSIHEDMRNLH---------IEILRQ-FHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~lh---------~~~~r~-~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr 645 (648)
.+.-|++.+..-++..+..|..|- |..||| |-..+++...-|..+-.....+-+|+.+|.+||+.|+
T Consensus 28 ~r~~Le~~w~~k~E~~k~qV~~L~~~~q~sE~~L~~Lqq~fsq~q~~vq~qL~~Lt~~Re~V~~eL~rLQ~eNd~L~ 104 (112)
T 1x79_B 28 DKQELEDFIKQSSEDSSHQISALVLRAQASEILLEELQQGLSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQ 104 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Confidence 455677777777888888887763 344444 6666777777777777777777778889999999886
No 384
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=86.09 E-value=19 Score=44.70 Aligned_cols=92 Identities=14% Similarity=0.177 Sum_probs=56.7
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC-
Q 006360 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH- 80 (648)
Q Consensus 2 FSpdG~~Lasgs~DG~V~IwDl~sg~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H- 80 (648)
.||..+.||.=. ..++.|||+.+...+..+.- ...+|. -+|-.+. .|+..+ +..|+-|++.+....++.+..|
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~Vvf-WkWis~~--~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTF-WKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceE-EEecCCC--eeEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 367777666553 67899999988877777664 334443 4665443 344433 4779999997644444444444
Q ss_pred ---CCCeEEEEEccCCCEEEEE
Q 006360 81 ---SAPTAGISFSSDDKIIASV 99 (648)
Q Consensus 81 ---~~~V~slafsPdg~~LaSg 99 (648)
...|..-..+++.++++..
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~ 168 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLT 168 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEE
Confidence 3445555556666665543
No 385
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=85.75 E-value=0.94 Score=43.48 Aligned_cols=68 Identities=13% Similarity=0.223 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhh
Q 006360 580 QRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEI-KSLRKENHQLRQL 647 (648)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~-~~lr~e~~~lr~~ 647 (648)
+.-|.+.+..+|+.+..||..|+-.|.-....++.-+..-++++..++.-..+|+ ++|++..++||+.
T Consensus 90 ~~~l~~~~e~lr~~l~kdlEelr~kL~P~~eEL~~~l~~~~Eelr~~L~Py~eelr~kl~~~~eeLr~~ 158 (191)
T 1nfn_A 90 RARLSKELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKR 158 (191)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 3457777888899999999999988877766666656656667777777777777 5677777777764
No 386
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=85.52 E-value=1.6 Score=29.75 Aligned_cols=29 Identities=28% Similarity=0.304 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 614 TQMSNVMSSILENQAELMKEIKSLRKENH 642 (648)
Q Consensus 614 ~e~~~~~~~~~~~~~~l~~e~~~lr~e~~ 642 (648)
++|..-.+++..+..+|..||.+||+.+.
T Consensus 4 nQLE~kVEeLl~~~~~Le~EV~RL~~ll~ 32 (36)
T 1kd8_A 4 KQLEAEVEEIESEVWHLENEVARLEKENA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 34566677788889999999999999875
No 387
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=85.41 E-value=0.81 Score=29.11 Aligned_cols=26 Identities=27% Similarity=0.230 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr 645 (648)
|+++..-++.|..|+|+|+...++|-
T Consensus 1 mdqlnallasleaenkqlkakveell 26 (31)
T 1p9i_A 1 MDQLNALLASLEAENKQLKAKVEELL 26 (31)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455557899999999999988874
No 388
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=84.99 E-value=3.7 Score=36.14 Aligned_cols=61 Identities=16% Similarity=0.314 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHhHHhHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 583 LEETLDSFQKSIHEDMRNLHIEILR---QFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQL 644 (648)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~lh~~~~r---~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~l 644 (648)
|++.|+.++.-+. +|..+|-++|- .-...+.+|..++++|......+...++.|.++|.++
T Consensus 17 I~~~i~~i~~~v~-~l~~~~~~~L~~~~~~~~~~~~l~~l~~~i~~~a~~ik~~Lk~l~~~~~~~ 80 (127)
T 1ez3_A 17 IRGFIDKIAENVE-EVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE 80 (127)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455666666555 88899988874 3345678899999999998999999999999988753
No 389
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=84.88 E-value=7.5 Score=31.66 Aligned_cols=28 Identities=11% Similarity=0.214 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 619 VMSSILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 619 ~~~~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
=+.+...+..+|..|+++||+|.+.||.
T Consensus 46 kL~eae~rn~eL~~e~~~l~~~~eelq~ 73 (81)
T 1wt6_A 46 QLREAEARNRDLEAHVRQLQERMELLQA 73 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3445677788999999999999999873
No 390
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=84.53 E-value=1.2 Score=35.46 Aligned_cols=28 Identities=29% Similarity=0.417 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
.+.+.+.+.+|++-|.+|..||+-||++
T Consensus 17 VevLKe~I~EL~e~~~qLE~EN~~Lk~~ 44 (78)
T 1dip_A 17 VEILKEQIRELVEKNSQLERENTLLKTL 44 (78)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3556777889999999999999999986
No 391
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=82.96 E-value=1.1 Score=36.95 Aligned_cols=24 Identities=21% Similarity=0.322 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 006360 624 LENQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 624 ~~~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
.+.+.+|.+|++.|++||++|++.
T Consensus 53 ~~~~~~l~~e~~~L~~~~~~L~~~ 76 (83)
T 1nkp_B 53 RRKNHTHQQDIDDLKRQNALLEQQ 76 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455666777777777777654
No 392
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=82.88 E-value=4.9 Score=30.59 Aligned_cols=28 Identities=46% Similarity=0.567 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 619 VMSSILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 619 ~~~~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
+=+...+++.-|.+++..|..||-.||+
T Consensus 35 VN~~ls~Elr~mQ~~lq~LQsen~~Lr~ 62 (63)
T 2w6a_A 35 VNSSLSDELRKLQREIHKLQAENLQLRQ 62 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhHhhhHHHHHHHHHHHHHHhhhhhhcc
Confidence 3356677788888999999999999996
No 393
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=82.65 E-value=3.4 Score=33.81 Aligned_cols=19 Identities=42% Similarity=0.520 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 006360 628 AELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 628 ~~l~~e~~~lr~e~~~lr~ 646 (648)
..+.+||.+|++||++||-
T Consensus 48 e~~~eEi~~Lk~en~~L~e 66 (83)
T 1wlq_A 48 EQKDSEIARLRKENKDLAE 66 (83)
T ss_dssp HHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3445556666666666654
No 394
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=82.60 E-value=1.2 Score=36.65 Aligned_cols=22 Identities=18% Similarity=0.466 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 006360 626 NQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 626 ~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
+..+|.+|+++||+||++|++-
T Consensus 55 ~~~~l~~e~~~L~~e~~~L~~~ 76 (80)
T 1nlw_A 55 SDRKAVHQIDQLQREQRHLKRQ 76 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666666653
No 395
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=82.55 E-value=48 Score=34.21 Aligned_cols=107 Identities=10% Similarity=-0.058 Sum_probs=57.1
Q ss_pred cEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCCceeEEecc-------------------CCCCeEEEEEcc-CCCEE
Q 006360 39 VLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ-------------------HSAPTAGISFSS-DDKII 96 (648)
Q Consensus 39 ~V~~Vafspd--g~~lLaSgs~Dg~V~IWDl~t~~~~v~~l~~-------------------H~~~V~slafsP-dg~~L 96 (648)
.|.+|++.|. .. .|+.+...+-|+..+-.+.. ...+.. ....|.+|.+.| +...|
T Consensus 116 ~i~~l~~~~~~~~~-~l~~g~~~ggl~~S~DgG~t--W~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l 192 (394)
T 3b7f_A 116 HVFWLTPGHASEPG-TWYAGTSPQGLFRSTDHGAS--WEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHL 192 (394)
T ss_dssp EEEEEEECCTTSTT-CEEEEEETTEEEEESSTTSB--CEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCE
T ss_pred ceeEEEeCCCCCCC-EEEEEecCCcEEEEcCCCCC--eEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEE
Confidence 5777888863 33 45555556666555332222 112211 123578999988 44555
Q ss_pred EEEeCCCeEEEEeCCCCceeeEeeC--------------CCCeEEEEEeCC-CCEEEEEEcCCeEEEEE
Q 006360 97 ASVGLDKKLYTYDPGSRRPSSCITY--------------EAPFSSLAFIDD-DWILTAGTSNGRVVFYD 150 (648)
Q Consensus 97 aSgs~Dg~I~IWDl~tgk~v~~~~h--------------~~~I~slafsPd-G~~Lasgs~DG~V~IWD 150 (648)
+.+..++.|...+- .++....+.. ...+.++.++|+ ...|+++...+ |+..+
T Consensus 193 ~vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~ 259 (394)
T 3b7f_A 193 YIGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD 259 (394)
T ss_dssp EEEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE
T ss_pred EEEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC
Confidence 55655554544432 2332222210 124889999985 46777776554 55544
No 396
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=82.31 E-value=2.3 Score=28.61 Aligned_cols=27 Identities=19% Similarity=0.266 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 614 TQMSNVMSSILENQAELMKEIKSLRKE 640 (648)
Q Consensus 614 ~e~~~~~~~~~~~~~~l~~e~~~lr~e 640 (648)
+++..=.+++..+..+|.+||.+||.=
T Consensus 4 nQLE~kVEeLl~~n~~Le~eV~rLk~l 30 (34)
T 2oxj_A 4 XQLEXKVXELLXKNXHLEXEVXRLKXL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 345666778888899999999999974
No 397
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=82.16 E-value=5.5 Score=31.81 Aligned_cols=30 Identities=13% Similarity=0.209 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 619 VMSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 619 ~~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
.+.+....++++.+||+.||.|...+|.+|
T Consensus 41 ~I~eLEk~L~ekd~eI~~LqseLDKfrSVl 70 (72)
T 3nmd_A 41 LIDELELELDQKDELIQMLQNELDKYRSVI 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 356666678889999999999999988754
No 398
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=82.04 E-value=2.4 Score=28.47 Aligned_cols=28 Identities=18% Similarity=0.098 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 614 TQMSNVMSSILENQAELMKEIKSLRKEN 641 (648)
Q Consensus 614 ~e~~~~~~~~~~~~~~l~~e~~~lr~e~ 641 (648)
+++..-.+++..+..+|..||.+||+=.
T Consensus 4 nQLEdKVEeLl~~~~~Le~EV~RLk~ll 31 (34)
T 3c3f_A 4 XQIEXKLEXILSXLYHXENEXARIXKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 4566677888888999999999999743
No 399
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=81.81 E-value=3.2 Score=34.59 Aligned_cols=22 Identities=23% Similarity=0.232 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 006360 625 ENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 625 ~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
++.+.|.+|+++|+++.++|++
T Consensus 66 ~~~~~L~~~n~~L~~rl~~L~~ 87 (88)
T 1nkp_A 66 SEEDLLRKRREQLKHKLEQLGG 87 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhc
Confidence 3345677777777777777764
No 400
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=81.60 E-value=3 Score=39.39 Aligned_cols=39 Identities=15% Similarity=0.244 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHH--H-HHHHHHHHHHHHHHHHHHHHHH
Q 006360 607 RQFHMQETQMSNVMSS--I-LENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 607 r~~~~~~~e~~~~~~~--~-~~~~~~l~~e~~~lr~e~~~lr 645 (648)
+|....+.||..++.. + .+++.+|.+|+..||.+...+|
T Consensus 92 ~ql~akr~EL~aL~~a~~~DeakI~aL~~Ei~~Lr~qL~~~R 133 (175)
T 3lay_A 92 QQLISKRYEYNALLTASSPDTAKINAVAKEMESLGQKLDEQR 133 (175)
T ss_dssp HHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566666621 0 2456677777777777766665
No 401
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=81.28 E-value=47 Score=33.21 Aligned_cols=145 Identities=12% Similarity=0.127 Sum_probs=86.7
Q ss_pred CCCEEEEEECCCcEEEEECCCC------ceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC----CC--c
Q 006360 5 KDEHLASISLSGDLILHNLASG------AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG----RS--P 72 (648)
Q Consensus 5 dG~~Lasgs~DG~V~IwDl~sg------~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t----~~--~ 72 (648)
+..+++..+.+|.|+...+..- .....++ .++.+..+....... .++..+.+|.++.++... +. .
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk--egD~l~~~~~~~~~~-~ill~T~~G~~~r~~~~eip~~gR~a~ 155 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT--EGDEVVSIASSVDET-HILLFTKKGRVARFSVREVPPSTPGAR 155 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC--TTCCEEEEEECCSSC-EEEEEETTSEEEEEEGGGSCBCCTTCC
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC--CCCEEEEEEEeCCCC-EEEEEECCCEEEEEEhhhCCCcCCCCC
Confidence 4568888999999999886442 1112232 334444444444444 566778889988887621 11 0
Q ss_pred eeE--EeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC-------CceeeEeeCCCCeEEEEEeCCCCEEEEEEcC
Q 006360 73 KVS--WLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-------RRPSSCITYEAPFSSLAFIDDDWILTAGTSN 143 (648)
Q Consensus 73 ~v~--~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~t-------gk~v~~~~h~~~I~slafsPdG~~Lasgs~D 143 (648)
-+. .+.. .+.|..+....++.+++.++..|.++...+.. ++-+..+...+.+..+....+...++..+.+
T Consensus 156 Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~ 234 (276)
T 3no0_A 156 GVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKN 234 (276)
T ss_dssp CEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETT
T ss_pred CEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCC
Confidence 011 1222 35566665555677899999999998887632 2223333344555555444444567778888
Q ss_pred CeEEE--EECCC
Q 006360 144 GRVVF--YDIRG 153 (648)
Q Consensus 144 G~V~I--WDl~s 153 (648)
|.+.. ++...
T Consensus 235 G~~ir~~~~~~~ 246 (276)
T 3no0_A 235 GKAFYDKINQKD 246 (276)
T ss_dssp SCEEEEEEEGGG
T ss_pred CeEEEeeeCHHH
Confidence 88877 77653
No 402
>2jn6_A Protein CGL2762, transposase; GFT PSI-2, protein structure, structural genomics, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: a.4.1.19
Probab=80.99 E-value=1.2 Score=37.20 Aligned_cols=20 Identities=30% Similarity=0.371 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 006360 628 AELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 628 ~~l~~e~~~lr~e~~~lr~~ 647 (648)
....+|+++|++||.+||..
T Consensus 62 ~~~~~ei~~L~~e~~~L~~e 81 (97)
T 2jn6_A 62 VSEAEQIRQLKKENALQRAR 81 (97)
T ss_dssp HHTHHHHHHHHHCGGGGGGT
T ss_pred CChHHHHHHHHHHHHHHHHH
Confidence 34567777777777777764
No 403
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=80.94 E-value=3.4 Score=30.22 Aligned_cols=33 Identities=15% Similarity=0.183 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 616 MSNVMSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 616 ~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|.++-+.+..++.+|.+-...+.+||+||+++|
T Consensus 9 LKe~n~~L~~kv~~Le~~c~~~eQEieRL~~LL 41 (48)
T 3vmx_A 9 LKQINIQLATKIQHLEFSCSEKEQEIERLNKLL 41 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 444455556667777777777778999998875
No 404
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=80.61 E-value=2.8 Score=28.21 Aligned_cols=27 Identities=19% Similarity=0.271 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 614 TQMSNVMSSILENQAELMKEIKSLRKE 640 (648)
Q Consensus 614 ~e~~~~~~~~~~~~~~l~~e~~~lr~e 640 (648)
+++..=.+++..+..+|..||.+||+=
T Consensus 4 ~QLEdKVEeLl~~n~~Le~EV~RLk~L 30 (34)
T 1uo4_A 4 KQIEDKGEEILSKLYHIENELARIKKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 346667788888899999999999974
No 405
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=80.59 E-value=2.9 Score=27.93 Aligned_cols=28 Identities=4% Similarity=0.089 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 614 TQMSNVMSSILENQAELMKEIKSLRKEN 641 (648)
Q Consensus 614 ~e~~~~~~~~~~~~~~l~~e~~~lr~e~ 641 (648)
+++..=.+++..+..+|..||.+||+=.
T Consensus 3 nQLEdKvEeLl~~~~~Le~EV~RLk~lL 30 (33)
T 3c3g_A 3 KXIEXKLXEIXSKXYHXENXLARIKXLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4566677888888999999999999743
No 406
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=80.59 E-value=1.4 Score=35.31 Aligned_cols=23 Identities=17% Similarity=0.304 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 006360 623 ILENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 623 ~~~~~~~l~~e~~~lr~e~~~lr 645 (648)
+..+...|.++|..|+.||++||
T Consensus 48 l~~en~~Lr~~i~~L~~El~~lr 70 (70)
T 1gd2_E 48 TTLENDQLRQKVRQLEEELRILK 70 (70)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 34445666667777777776664
No 407
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=79.99 E-value=3.1 Score=27.99 Aligned_cols=27 Identities=15% Similarity=0.305 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 614 TQMSNVMSSILENQAELMKEIKSLRKE 640 (648)
Q Consensus 614 ~e~~~~~~~~~~~~~~l~~e~~~lr~e 640 (648)
+++..-.+++..+..+|..||.+||+=
T Consensus 4 nQLEdkVEeLl~~~~~Le~eV~RL~~l 30 (34)
T 2hy6_A 4 KQLADAVEELASANYHLANAVARLAKA 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 457777888888899999999999974
No 408
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=79.79 E-value=2.2 Score=28.61 Aligned_cols=26 Identities=23% Similarity=0.354 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 615 QMSNVMSSILENQAELMKEIKSLRKE 640 (648)
Q Consensus 615 e~~~~~~~~~~~~~~l~~e~~~lr~e 640 (648)
++..=.+++..+..+|..||.+||+=
T Consensus 4 QLE~kVEeLl~~n~~Le~EV~RLk~L 29 (33)
T 3m48_A 4 QLEAKVEELLSKNWNLENEVARLKKL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 45556677777889999999999863
No 409
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=79.78 E-value=4.2 Score=38.79 Aligned_cols=20 Identities=35% Similarity=0.516 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 006360 628 AELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 628 ~~l~~e~~~lr~e~~~lr~~ 647 (648)
..|.+||.+|++||++||.|
T Consensus 125 e~l~eEi~~LkeEn~eLkeL 144 (209)
T 2wvr_A 125 EQKDNEIARLKKENKELAEV 144 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34556666666666666654
No 410
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=79.58 E-value=1.9 Score=42.86 Aligned_cols=24 Identities=29% Similarity=0.450 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 623 ILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 623 ~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
+.+.+.+|++|+.+||+|+++|++
T Consensus 73 L~~~Lk~ar~El~~LkeElerL~s 96 (251)
T 3m9b_A 73 LMETLKEARQQLLALREEVDRLGQ 96 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 566788899999999999999986
No 411
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=79.37 E-value=2.5 Score=33.77 Aligned_cols=23 Identities=26% Similarity=0.250 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 006360 624 LENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 624 ~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
......|..||..||.++++|+.
T Consensus 42 e~~~~~l~~en~~Lr~~i~~L~~ 64 (70)
T 1gd2_E 42 KELHSSTTLENDQLRQKVRQLEE 64 (70)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566666666666666653
No 412
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=79.31 E-value=2.1 Score=34.97 Aligned_cols=27 Identities=26% Similarity=0.201 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006360 621 SSILENQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 621 ~~~~~~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
+++..+..+|.+||.+||.|+++|++-
T Consensus 39 ~e~~~r~~~L~~eN~~L~~~v~~L~~E 65 (78)
T 1gu4_A 39 LETQHKVLELTAENERLQKKVEQLSRE 65 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566788888888888888888763
No 413
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=78.85 E-value=1.7 Score=36.20 Aligned_cols=25 Identities=28% Similarity=0.282 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 622 SILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 622 ~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
++..+..+|.+||.+||.|+++|.+
T Consensus 40 e~~~r~~~Le~EN~~Lr~~v~~L~~ 64 (87)
T 1hjb_A 40 ETQHKVLELTAENERLQKKVEQLSR 64 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344567777777777777777765
No 414
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=78.77 E-value=2.8 Score=39.59 Aligned_cols=66 Identities=6% Similarity=0.034 Sum_probs=31.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 572 SNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQ-----ETQMSNVMSSILENQAELMKEIKSLRKE 640 (648)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~~~r~~~~~-----~~e~~~~~~~~~~~~~~l~~e~~~lr~e 640 (648)
+.-|-+=|+.|.++...+. +.++++|...|.||-. .+. +..++.+.++|.+-+++|++|--.++.|
T Consensus 69 T~EQq~ql~~I~~e~r~~~-~~Lr~ql~akr~EL~a--L~~a~~~DeakI~aL~~Ei~~Lr~qL~~~R~k~~~e 139 (175)
T 3lay_A 69 TTEQQATAQKIYDDYYTQT-SALRQQLISKRYEYNA--LLTASSPDTAKINAVAKEMESLGQKLDEQRVKRDVA 139 (175)
T ss_dssp CHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH--HHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH--HHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666666554443 2355666666655421 111 1344555555544444444444444333
No 415
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=78.70 E-value=60 Score=32.96 Aligned_cols=148 Identities=11% Similarity=0.071 Sum_probs=86.2
Q ss_pred CCCCEEEEEECCCcEEEEECCCCce-------eEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC---C---
Q 006360 4 CKDEHLASISLSGDLILHNLASGAK-------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG---R--- 70 (648)
Q Consensus 4 pdG~~Lasgs~DG~V~IwDl~sg~~-------i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t---~--- 70 (648)
++..++++.+.+|.|+-..+..-+. +..+.-...+.+..+......+ .++..+..|.++-+.... .
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~-~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHD-YLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTC-EEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCC-EEEEEECCCeEEEEEHHHCCCCCcc
Confidence 5667889999999999887643211 1112212334444344333444 466667889887766521 1
Q ss_pred ---Cce--eEEeccCCCCeEEEEEcc---CCCEEEEEeCCCeEEEEeCCC-------CceeeEeeCCCCeEEEEEeCCCC
Q 006360 71 ---SPK--VSWLKQHSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGS-------RRPSSCITYEAPFSSLAFIDDDW 135 (648)
Q Consensus 71 ---~~~--v~~l~~H~~~V~slafsP---dg~~LaSgs~Dg~I~IWDl~t-------gk~v~~~~h~~~I~slafsPdG~ 135 (648)
... ...+.. .+.|..+.... +..+|+.++..|.++...+.. |.....+.....+..+....++.
T Consensus 85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 000 001222 23455443332 467888999999999888742 22222233456677666666567
Q ss_pred EEEEEEcCCeEEEEECCC
Q 006360 136 ILTAGTSNGRVVFYDIRG 153 (648)
Q Consensus 136 ~Lasgs~DG~V~IWDl~s 153 (648)
.|+..+.+|.+..++...
T Consensus 164 ~i~l~T~~G~~~r~~~~e 181 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRD 181 (312)
T ss_dssp EEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHH
Confidence 888999999999988764
No 416
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=77.94 E-value=3.9 Score=27.57 Aligned_cols=28 Identities=18% Similarity=0.337 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 614 TQMSNVMSSILENQAELMKEIKSLRKEN 641 (648)
Q Consensus 614 ~e~~~~~~~~~~~~~~l~~e~~~lr~e~ 641 (648)
+++..=.+++..+..+|..||.+||+=.
T Consensus 4 nQLEdKvEeLl~~~~~L~~EV~RLk~lL 31 (34)
T 2bni_A 4 KQIEDKLEEILSKGHHICNELARIKKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 3566777888888999999999999743
No 417
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=77.91 E-value=1.4 Score=32.32 Aligned_cols=18 Identities=44% Similarity=0.804 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 006360 629 ELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 629 ~l~~e~~~lr~e~~~lr~ 646 (648)
.|...|+.||+||--|||
T Consensus 7 QL~~QVe~Lk~ENshLrr 24 (54)
T 1deb_A 7 QLLKQVEALKMENSNLRQ 24 (54)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHH
Confidence 455555555555555555
No 418
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=76.95 E-value=1.8 Score=37.70 Aligned_cols=28 Identities=25% Similarity=0.324 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
|.+++.++.+|.+|++.||+|+++||..
T Consensus 9 ~~~l~~~~~~l~~~i~~lkeel~~L~~~ 36 (109)
T 2wg5_A 9 MKQLEDKVEELLSKNYHLENEVARLRSP 36 (109)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3455666788999999999999999863
No 419
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=76.75 E-value=11 Score=35.62 Aligned_cols=53 Identities=11% Similarity=0.233 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 582 TLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEI 634 (648)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~ 634 (648)
-|..-.+.+|+.+..||..++-.|.--....+.=+..=|+++..+++=+.+|+
T Consensus 75 ~l~~~~~~Lr~~l~kdlee~r~~l~P~~~e~~~~~~~~~e~lr~~l~Py~~el 127 (185)
T 3r2p_A 75 NLEKETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEMELYRQKVEPLRAEL 127 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 33344556666666666666554444333333333344444444444444444
No 420
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=76.72 E-value=3.6 Score=31.74 Aligned_cols=28 Identities=21% Similarity=0.200 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 619 VMSSILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 619 ~~~~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
-++++.++..+|.+||..|+.|+++||.
T Consensus 23 ~~~~Le~~~~~L~~~n~~L~~~i~~L~~ 50 (61)
T 1t2k_D 23 WVQSLEKKAEDLSSLNGQLQSEVTLLRN 50 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566666777888888888888888875
No 421
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=76.53 E-value=21 Score=28.55 Aligned_cols=52 Identities=10% Similarity=0.136 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 586 TLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQL 644 (648)
Q Consensus 586 ~~~~~~~~~~~~~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~l 644 (648)
+-+++-+.-++|+.. .|+.+-.||......-.+.+.....||..||+..|.|
T Consensus 17 QYE~ia~knr~EaE~-------~y~~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L 68 (77)
T 3trt_A 17 QYESVAAKNLQEAEE-------WYKSKFADLSEAANRNNDALRQAKQESTEYRRQVQSL 68 (77)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHH-------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444555544 4444444555554444444444444444444444444
No 422
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=76.49 E-value=2.3 Score=35.48 Aligned_cols=27 Identities=30% Similarity=0.404 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006360 621 SSILENQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 621 ~~~~~~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
..+......|..|++.|++||++|++-
T Consensus 55 ~~L~~~~~~l~~~~~~L~~~n~~L~~r 81 (88)
T 1nkp_A 55 LSVQAEEQKLISEEDLLRKRREQLKHK 81 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445567777888888888888764
No 423
>3v86_A De novo design helix; computational design of A protein crystal, helical coil, DE designed helix, de novo protein; 2.91A {Synthetic}
Probab=76.48 E-value=4.1 Score=25.14 Aligned_cols=22 Identities=27% Similarity=0.501 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 006360 623 ILENQAELMKEIKSLRKENHQL 644 (648)
Q Consensus 623 ~~~~~~~l~~e~~~lr~e~~~l 644 (648)
+..++.||.-||++|+.|...|
T Consensus 5 lkdevgelkgevralkdevkdl 26 (27)
T 3v86_A 5 LKDEVGELKGEVRALKDEVKDL 26 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhHHHHHHHHHhcc
Confidence 3455677888888888887765
No 424
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=76.45 E-value=5.3 Score=32.63 Aligned_cols=23 Identities=17% Similarity=0.372 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 006360 622 SILENQAELMKEIKSLRKENHQL 644 (648)
Q Consensus 622 ~~~~~~~~l~~e~~~lr~e~~~l 644 (648)
.+..+.+.|.+|++.|+++.+||
T Consensus 58 ~l~~e~~~L~~e~~~L~~~L~~l 80 (80)
T 1nlw_A 58 KAVHQIDQLQREQRHLKRQLEKL 80 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 34455688999999999888876
No 425
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=76.30 E-value=29 Score=41.21 Aligned_cols=38 Identities=21% Similarity=0.256 Sum_probs=33.2
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEee
Q 006360 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT 120 (648)
Q Consensus 83 ~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~ 120 (648)
.|.+++..++..++++.+.|+++|+|++.+++++....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777888888999999999999999999999887764
No 426
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=76.29 E-value=6.2 Score=26.89 Aligned_cols=30 Identities=17% Similarity=0.285 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 614 TQMSNVMSSILENQAELMKEIKSLRKENHQ 643 (648)
Q Consensus 614 ~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~ 643 (648)
+++..=.+++..+..+|..||.+||+-+.+
T Consensus 4 nQLE~KVEeLl~~~~~Le~eV~RLk~ll~~ 33 (36)
T 1kd8_B 4 KQLKAKVEELKSKLWHLKNKVARLKKKNAE 33 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 356666788888899999999999987654
No 427
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=76.18 E-value=4.7 Score=26.93 Aligned_cols=27 Identities=15% Similarity=0.049 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 614 TQMSNVMSSILENQAELMKEIKSLRKE 640 (648)
Q Consensus 614 ~e~~~~~~~~~~~~~~l~~e~~~lr~e 640 (648)
+++..=.++...+..+|..||.+||+=
T Consensus 3 nQLEdKVEell~~~~~le~EV~Rl~~l 29 (33)
T 2wq1_A 3 KQLEDKIEENTSKIYHNTNEIARNTKL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 346666777788889999999999973
No 428
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=76.02 E-value=16 Score=34.84 Aligned_cols=33 Identities=12% Similarity=0.221 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006360 615 QMSNVMSSILENQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 615 e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
.+...-.+....+..|.+|+..||+++++|+..
T Consensus 78 K~~~~~~e~~~~~~~Lq~el~~l~~~~~~l~~~ 110 (189)
T 2v71_A 78 KLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKY 110 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333343444677777788888887777653
No 429
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=75.97 E-value=24 Score=28.82 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhhC
Q 006360 615 QMSNVMSSILENQAELMKEIKSLRKEN----HQLRQLL 648 (648)
Q Consensus 615 e~~~~~~~~~~~~~~l~~e~~~lr~e~----~~lr~~~ 648 (648)
.+..-.+++.++.+.|..||++|++|- +|||.||
T Consensus 38 ~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LL 75 (81)
T 2jee_A 38 SLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALL 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555556666888999999885 4566553
No 430
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=75.79 E-value=5.9 Score=41.31 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=61.8
Q ss_pred EEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEc--cCCCEEEEE--eCCCeEEEEeCCCCceeeEee-----CC
Q 006360 52 LLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFS--SDDKIIASV--GLDKKLYTYDPGSRRPSSCIT-----YE 122 (648)
Q Consensus 52 lLaSgs~Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafs--Pdg~~LaSg--s~Dg~I~IWDl~tgk~v~~~~-----h~ 122 (648)
+++.++.||.|+-+|..+++...+.-.....++....-. +.+..++.+ ..||.|+.+|..+|.....+. ..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 688889999999999988874322211111222221100 112234434 689999999998885443332 22
Q ss_pred CCeEE---EEE-e----CCCCEEEEEEcCCeEEEEECCCCC
Q 006360 123 APFSS---LAF-I----DDDWILTAGTSNGRVVFYDIRGKP 155 (648)
Q Consensus 123 ~~I~s---laf-s----PdG~~Lasgs~DG~V~IWDl~s~~ 155 (648)
.++.. ..+ . ..+..+++|+.+|.++..|+++++
T Consensus 92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp CSEEEECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 22221 000 0 145688899999999999999984
No 431
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=74.72 E-value=4.7 Score=30.20 Aligned_cols=28 Identities=18% Similarity=0.172 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 621 SSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 621 ~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
.++..++++|..-.....+|++||++||
T Consensus 21 ~~L~~kv~~Le~~c~e~eQEieRL~~LL 48 (58)
T 3a2a_A 21 VQLAAKIQHLEFSCSEKEQEIERLNKLL 48 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456667778777778888888888875
No 432
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=74.62 E-value=2.4 Score=32.13 Aligned_cols=22 Identities=18% Similarity=0.208 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 006360 626 NQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 626 ~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
-+.+|..+|+.|.+||.+|+..
T Consensus 23 ~~~~LE~~v~~L~~eN~~L~~~ 44 (55)
T 1dh3_A 23 YVKSLENRVAVLENQNKTLIEE 44 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3567778888888888888753
No 433
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=74.43 E-value=95 Score=35.46 Aligned_cols=175 Identities=10% Similarity=0.054 Sum_probs=89.5
Q ss_pred CccCCCCEEEEE-ECCC----cEEEEECCCCceeEE-EeCCCCC------cEEEEEEccCCCeEEEEE----------eC
Q 006360 1 MYNCKDEHLASI-SLSG----DLILHNLASGAKAAE-LKDPNEQ------VLRVLDYSRNSRHLLVTA----------GD 58 (648)
Q Consensus 1 AFSpdG~~Lasg-s~DG----~V~IwDl~sg~~i~~-l~~~~~~------~V~~Vafspdg~~lLaSg----------s~ 58 (648)
+|+||+++++.+ +..| .|+++|+.+++.+.. +....+. ....++|..+ +.++++. +.
T Consensus 136 ~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~~~~~~~~ 214 (711)
T 4hvt_A 136 NCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKNEITSSLY 214 (711)
T ss_dssp ECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTTCBCTTSS
T ss_pred ecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECC-CEEEEEeCCCCCCcCcCCC
Confidence 378999987664 3333 699999999877631 1100001 1133578744 3355542 12
Q ss_pred CCeEEEEECCCCCce-eEEeccCCCCe-EEEEEccCCC-----EEEEEeCC---CeEEEEeCCC--CceeeEeeCCCCeE
Q 006360 59 DGTLHLWDTTGRSPK-VSWLKQHSAPT-AGISFSSDDK-----IIASVGLD---KKLYTYDPGS--RRPSSCITYEAPFS 126 (648)
Q Consensus 59 Dg~V~IWDl~t~~~~-v~~l~~H~~~V-~slafsPdg~-----~LaSgs~D---g~I~IWDl~t--gk~v~~~~h~~~I~ 126 (648)
...|+.|.+-+.... ...+.+....+ .....+.+++ .+++.+.+ ..+++.|... ++.+.+. ......
T Consensus 215 ~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~ 293 (711)
T 4hvt_A 215 PNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKIN-MPSDAT 293 (711)
T ss_dssp BCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECC-SCTTCE
T ss_pred CCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEee-cCCcce
Confidence 356999988654311 22333333333 3344556655 24444422 3567777654 3333332 122221
Q ss_pred EEEEeCCCCEEEEE----------EcCCeEEEEECCCC------CCceEEEeecCCCCCeeEEEEccC
Q 006360 127 SLAFIDDDWILTAG----------TSNGRVVFYDIRGK------PQPLTVLRACSSSEAVSSLCWQRA 178 (648)
Q Consensus 127 slafsPdG~~Lasg----------s~DG~V~IWDl~s~------~~~~~~l~~~~h~~~VtsLafspd 178 (648)
+....++.+++.. ...+.|.++|+.+. ....+.+-.......+..+.|..+
T Consensus 294 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 360 (711)
T 4hvt_A 294 -LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD 360 (711)
T ss_dssp -EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS
T ss_pred -EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC
Confidence 2334455554422 24677999998763 122333332334456778888764
No 434
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=73.97 E-value=75 Score=31.67 Aligned_cols=142 Identities=15% Similarity=0.074 Sum_probs=82.7
Q ss_pred EEEEEECCCcEEEEEC---CCCceeEEEeCCCCCcEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCC---ceeE--Eec
Q 006360 8 HLASISLSGDLILHNL---ASGAKAAELKDPNEQVLRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRS---PKVS--WLK 78 (648)
Q Consensus 8 ~Lasgs~DG~V~IwDl---~sg~~i~~l~~~~~~~V~~Vafsp-dg~~lLaSgs~Dg~V~IWDl~t~~---~~v~--~l~ 78 (648)
+|+.-+.+|.++--.+ ..+.... + -..++.|..+.... ++. +++..+.+|.|+-..+..-. .-+. .++
T Consensus 37 ~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~~~e~i~~v~~~~~~~~-~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk 113 (276)
T 3no0_A 37 GLFLVSNRGRVYWIAGSQALQGSKVS-L-KSREEKIVGAFIREKFGN-RLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT 113 (276)
T ss_dssp CEEEEETTSEEEEECSHHHHTSEECC-C-SSTTCCEEEEEEGGGSCS-EEEEEETTSEEEEEEGGGTTTCSTTEECSCCC
T ss_pred EEEEEcCCCeEEEEEhhhCccCcccc-c-CCCCCEEEEEECCcCCCC-EEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC
Confidence 4445556676654332 2221111 2 22344454443321 344 78889999999998874321 0011 222
Q ss_pred cCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC---------CceeeEeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEE
Q 006360 79 QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS---------RRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFY 149 (648)
Q Consensus 79 ~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~t---------gk~v~~~~h~~~I~slafsPdG~~Lasgs~DG~V~IW 149 (648)
. .+.+..+........|+..+..|.++.++... |.....+.....|..+....++..|+..+..|.++..
T Consensus 114 e-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~ 192 (276)
T 3no0_A 114 E-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKI 192 (276)
T ss_dssp T-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEE
T ss_pred C-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEe
Confidence 2 34566555555667889999999988887532 1111123345667766666667789999999999988
Q ss_pred ECCC
Q 006360 150 DIRG 153 (648)
Q Consensus 150 Dl~s 153 (648)
.+..
T Consensus 193 ~~~e 196 (276)
T 3no0_A 193 SHEE 196 (276)
T ss_dssp EGGG
T ss_pred EHHH
Confidence 8754
No 435
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=73.85 E-value=4.7 Score=31.20 Aligned_cols=29 Identities=17% Similarity=0.201 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006360 619 VMSSILENQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 619 ~~~~~~~~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
-++++.+++.+|..||..|+.|.++|+.-
T Consensus 23 ~~~~Le~~v~~L~~~n~~L~~~v~~L~~e 51 (62)
T 1jnm_A 23 RIARLEEKVKTLKAQNSELASTANMLREQ 51 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666777888999999999999988863
No 436
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=73.68 E-value=19 Score=35.69 Aligned_cols=76 Identities=12% Similarity=0.082 Sum_probs=50.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH---HHHhHHhHHHHH-----------HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 573 NFTLQLFQRTLEETLDSFQKSI---HEDMRNLHIEIL-----------RQFHMQ-ETQMSNVMSSILENQAELMKEIKSL 637 (648)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lh~~~~-----------r~~~~~-~~e~~~~~~~~~~~~~~l~~e~~~l 637 (648)
..+++-.|+.-+.+.-+|-..| |.-.+--+|+.| +|+|.. ..+|..-|+++...+..+++|.+..
T Consensus 164 ~~~l~~~Rk~f~~~~ldyv~~l~~l~~kk~~e~le~l~~~~~a~~~ff~~g~e~~~~~~~p~~~~l~~~l~~~r~~~~~~ 243 (265)
T 2q12_A 164 TEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSD 243 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555556666666555554433 333333344444 444444 3488888999999999999999999
Q ss_pred HHHHHHHHhhC
Q 006360 638 RKENHQLRQLL 648 (648)
Q Consensus 638 r~e~~~lr~~~ 648 (648)
|++.+++|+.|
T Consensus 244 ~~~~~~~~~~l 254 (265)
T 2q12_A 244 IETMQQTIEDL 254 (265)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 437
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=73.46 E-value=44 Score=30.61 Aligned_cols=69 Identities=13% Similarity=0.278 Sum_probs=48.6
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHHhHH--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 576 LQLFQRTLEE---TLDSFQKSIHEDMRN--LHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQL 644 (648)
Q Consensus 576 ~~~~~~~~~~---~~~~~~~~~~~~~~~--lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~l 644 (648)
.+-|...+++ .|.+|-+.+.+||.. -=++||++|...+.|...-.+..+++-.+-.+.|+++|+|.+..
T Consensus 70 ~e~l~~~veeA~~~L~eYn~rL~~E~~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~h 143 (152)
T 4fla_A 70 AERLSKTVDEACLLLAEYNGRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSH 143 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556665 577888888887754 33899999999888876655555655666667777888777654
No 438
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=73.31 E-value=22 Score=44.11 Aligned_cols=140 Identities=11% Similarity=0.113 Sum_probs=92.1
Q ss_pred CCCeEEEEECCCCCceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCCCceeeEeeCCCCeEEEEEeCCCCEE
Q 006360 58 DDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWIL 137 (648)
Q Consensus 58 ~Dg~V~IWDl~t~~~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~tgk~v~~~~h~~~I~slafsPdG~~L 137 (648)
.+..|.|-|+..+....+.-.. .-+.-.+|..+.|+.-. ..++.|+|+.+...+..+.....|..-.|-.+ +.|
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi~----AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~-~~l 119 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPIS----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTV 119 (1630)
T ss_pred CCceEEEEECCCCCCccccccc----chhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCC-Cee
Confidence 3347888888765532222111 12234577777776654 67899999999888877777778888888755 345
Q ss_pred EEEEcCCeEEEEECCCCCCceEEEeecC--CCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCC
Q 006360 138 TAGTSNGRVVFYDIRGKPQPLTVLRACS--SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (648)
Q Consensus 138 asgs~DG~V~IWDl~s~~~~~~~l~~~~--h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr 209 (648)
+..+. ..|+.|++.+...|.+++..+. ....|..-..+++.+|++..|-..... ...|.+.+|.+.
T Consensus 120 ~lVT~-~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~-----~v~G~mQLyS~e 187 (1630)
T 1xi4_A 120 ALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQN-----RVVGAMQLYSVD 187 (1630)
T ss_pred EEEcC-CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCC-----cccceeeeeecc
Confidence 55543 4699999987667777766431 145677888899999987764433222 235677777654
No 439
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=72.78 E-value=88 Score=31.97 Aligned_cols=147 Identities=10% Similarity=0.108 Sum_probs=84.2
Q ss_pred CCCCEEEEEECCCcEEEEECCC----CceeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC---CCC------
Q 006360 4 CKDEHLASISLSGDLILHNLAS----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT---TGR------ 70 (648)
Q Consensus 4 pdG~~Lasgs~DG~V~IwDl~s----g~~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl---~t~------ 70 (648)
++..++++.+.+|.|+--.+.. +.....++ ..+.+..+......+ .|+..+..|.++-+.. ...
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lk--e~D~l~~~~~~~t~d-~ll~fT~~Gr~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK--DTDRLLAMLEMNTKD-VLLLFTNKGNYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC--TTCCEEEEEEEETTS-EEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccC--CCCEEEEEEEECCCC-EEEEEECCCEEEEEEHHHCcCCCCCCCC
Confidence 5677889999999998876531 11111222 334443333333344 4555577788766554 211
Q ss_pred CceeEEec-cCCCCeEEE-EEcc--CCCEEEEEeCCCeEEEEeCCCC------ceee--EeeCCCCeEEEEEeCCCCEEE
Q 006360 71 SPKVSWLK-QHSAPTAGI-SFSS--DDKIIASVGLDKKLYTYDPGSR------RPSS--CITYEAPFSSLAFIDDDWILT 138 (648)
Q Consensus 71 ~~~v~~l~-~H~~~V~sl-afsP--dg~~LaSgs~Dg~I~IWDl~tg------k~v~--~~~h~~~I~slafsPdG~~La 138 (648)
.+....+. .....|..+ .... ++.+|+.++.+|.++...+..- +-+. .+...+.+..+........|+
T Consensus 80 ~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 80 QHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELF 159 (323)
T ss_dssp EEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEE
T ss_pred cChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEE
Confidence 10001111 122345554 3432 2668999999999999887421 1122 223345666666665667888
Q ss_pred EEEcCCeEEEEECCC
Q 006360 139 AGTSNGRVVFYDIRG 153 (648)
Q Consensus 139 sgs~DG~V~IWDl~s 153 (648)
..+.+|.+..++...
T Consensus 160 l~T~~G~~irf~~~e 174 (323)
T 1wp5_A 160 LVTHNGYALWFDESE 174 (323)
T ss_dssp EEETTSEEEEEEGGG
T ss_pred EEeCCCcEEEEEHHH
Confidence 999999998888753
No 440
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=72.68 E-value=95 Score=33.42 Aligned_cols=103 Identities=11% Similarity=0.110 Sum_probs=56.2
Q ss_pred CccCCCC-EEEEEECCCcEEEEECCCC---ceeEEEeC--------CCCCcEEEEEEccC---CCeEEEEEeC--C----
Q 006360 1 MYNCKDE-HLASISLSGDLILHNLASG---AKAAELKD--------PNEQVLRVLDYSRN---SRHLLVTAGD--D---- 59 (648)
Q Consensus 1 AFSpdG~-~Lasgs~DG~V~IwDl~sg---~~i~~l~~--------~~~~~V~~Vafspd---g~~lLaSgs~--D---- 59 (648)
+|.|||. .|+++...|.|++++.... ..+..+.. ........|+|+|+ ...++++-+. +
T Consensus 20 a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~ 99 (463)
T 2wg3_C 20 LHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERWAI 99 (463)
T ss_dssp ECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSSCS
T ss_pred EECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCccc
Confidence 4789986 4555678899999975322 12222221 01345677999986 2324444332 1
Q ss_pred ------CeEEEEECCCC---------CceeEEec--cCCCCeEEEEEccCCCEEEEEeCCC
Q 006360 60 ------GTLHLWDTTGR---------SPKVSWLK--QHSAPTAGISFSSDDKIIASVGLDK 103 (648)
Q Consensus 60 ------g~V~IWDl~t~---------~~~v~~l~--~H~~~V~slafsPdg~~LaSgs~Dg 103 (648)
..|.-|.+... ...+..+. ........|.|.|||.++++.+..+
T Consensus 100 ~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 100 GPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp SSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 13444665321 11121121 1122457899999998888776543
No 441
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=72.38 E-value=15 Score=39.70 Aligned_cols=31 Identities=16% Similarity=0.234 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHhHHhHHH---------HHHHHHHHHH
Q 006360 584 EETLDSFQKSIHEDMRNLHIE---------ILRQFHMQET 614 (648)
Q Consensus 584 ~~~~~~~~~~~~~~~~~lh~~---------~~r~~~~~~~ 614 (648)
++.|+++++.+.+.|..+..+ |-||+-..|.
T Consensus 372 eeal~~~~~~i~~~l~~~~~~~e~~~~~~~~~~~~~~~~~ 411 (471)
T 3mq9_A 372 DEALKDAQTRITAARDGLRAVMEARNVTHLLQQELTEAQK 411 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhhHHHHHHHHHHHHhh
Confidence 457777777777777777666 6666655444
No 442
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=71.58 E-value=3.2 Score=26.77 Aligned_cols=20 Identities=45% Similarity=0.469 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 006360 627 QAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 627 ~~~l~~e~~~lr~e~~~lr~ 646 (648)
++.|.|||.+-..||-||-|
T Consensus 3 vaqlekevaqaeaenyqleq 22 (33)
T 1fmh_A 3 VAQLEKEVAQAEAENYQLEQ 22 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHH
Confidence 45555555555555555543
No 443
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=71.44 E-value=22 Score=38.46 Aligned_cols=41 Identities=12% Similarity=0.093 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 605 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 605 ~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr 645 (648)
|..+...-++.|...|+.+.++..+|.||+++|++|++++=
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (487)
T 3oja_A 422 MYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEAD 462 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhh
Confidence 55555556666788888899999999999999999988763
No 444
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=71.38 E-value=95 Score=31.78 Aligned_cols=114 Identities=16% Similarity=0.156 Sum_probs=72.1
Q ss_pred CcEEEEEEcc--CCCeEEEEEeCCCeEEEEECCCCC------ceeEEeccCCCCeEEEEEccCCCEEEEEeCCCeEEEEe
Q 006360 38 QVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGRS------PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD 109 (648)
Q Consensus 38 ~~V~~Vafsp--dg~~lLaSgs~Dg~V~IWDl~t~~------~~v~~l~~H~~~V~slafsPdg~~LaSgs~Dg~I~IWD 109 (648)
..+..+.+.. +.. +++.++.+|.|+--.+..-. .....++. .+.+..+........|+..+..|.+..+.
T Consensus 96 ~i~~~~~~~~~~~e~-~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 96 RIAQVIQIRGYTDAP-YLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CEEEEEEESSTTSSS-EEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred EEEEEEEeccCCCCC-EEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 3444444543 344 78889999999988763311 11112333 34455555555667888899999888887
Q ss_pred CC--C----Cc---eee--EeeCCCCeEEEEEeCCCCEEEEEEcCCeEEEEECCC
Q 006360 110 PG--S----RR---PSS--CITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (648)
Q Consensus 110 l~--t----gk---~v~--~~~h~~~I~slafsPdG~~Lasgs~DG~V~IWDl~s 153 (648)
.. . ++ -+. .+.....|.++...+++.+|+..+..|.++.-.+..
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred CcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 66 2 11 111 123456677776666677899999999999887653
No 445
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=71.31 E-value=26 Score=28.16 Aligned_cols=51 Identities=22% Similarity=0.266 Sum_probs=31.3
Q ss_pred HHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 595 HEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 595 ~~~~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
..+|.||..|=- |...-++.+..+-+.+..++++|.-|...|+.|++-+++
T Consensus 8 gkevEnLi~EN~-eLl~TKNaLnvvk~DLI~rvdELt~E~e~l~~El~s~~~ 58 (77)
T 2w83_C 8 GREVENLILENT-QLLETKNALNIVKNDLIAKVDELTCEKDVLQGELEAVKQ 58 (77)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 345555544321 223345566666667777777777777777777776665
No 446
>1t72_A Phosphate transport system protein PHOU homolog; helix bundle, structural genomics, BSGC structure funded by NIH, protein structure initiative; 2.90A {Aquifex aeolicus} SCOP: a.7.12.1 PDB: 1t8b_A
Probab=71.23 E-value=6.2 Score=38.02 Aligned_cols=57 Identities=7% Similarity=0.146 Sum_probs=43.9
Q ss_pred HHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 590 FQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 590 ~~~~~~~~~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
.++..++++..+.-+++||+..-+.-+..+++.+.+.-.++.++|..+-++.++|..
T Consensus 5 ~~~~~~~~l~~~~~~l~~M~~~v~~~l~~a~~al~~~d~~~a~~v~~~d~~iD~l~~ 61 (227)
T 1t72_A 5 GGMKLFKELEETKEQVIKMAKLVQEAIDKATEALNKQNVELAEEVIKGDDTIDLLEV 61 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHhHHHHHHHHH
Confidence 366778888899999999999999888888888876556677777666666666543
No 447
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=71.06 E-value=5.9 Score=30.75 Aligned_cols=27 Identities=19% Similarity=0.245 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
++++..+...|.+||..|++|.++|++
T Consensus 25 ~~~Le~~v~~L~~~n~~L~~ei~~L~~ 51 (63)
T 2wt7_A 25 TDTLQAETDQLEDEKSALQTEIANLLK 51 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566677777777777777777765
No 448
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=69.92 E-value=51 Score=28.74 Aligned_cols=59 Identities=19% Similarity=0.274 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 582 TLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr 645 (648)
-+++.+++||...-.|+ +++-++=-.|..++..+-.+ --...+|..+++.|++|..=||
T Consensus 45 n~~~~~edfk~KyE~E~-~~r~~~E~di~~lrK~lD~~----~l~r~dLE~~iesL~eEl~FLK 103 (119)
T 3ol1_A 45 NLAEDIMRLREKLQEEM-LQREEAENTLQSFRQDVDNA----SLARLDLERKVESLQEEIAFLK 103 (119)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHH-HHHHHHHHHHHHhhhcccHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666665554443 33433333444433333222 1122334444444444444443
No 449
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=69.33 E-value=8.4 Score=25.95 Aligned_cols=27 Identities=11% Similarity=0.165 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 614 TQMSNVMSSILENQAELMKEIKSLRKE 640 (648)
Q Consensus 614 ~e~~~~~~~~~~~~~~l~~e~~~lr~e 640 (648)
+++..=++++..+..+|..||.+||+=
T Consensus 4 nQledKvEel~~~~~~l~nEv~Rl~~l 30 (34)
T 2r2v_A 4 KQVADKLEEVASKLYHNANELARVAKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 456667788888899999999999973
No 450
>1wmi_B RELB, hypothetical protein PHS014; toxin-antitoxin complex, hydrolase-hydrolase inhibitor compl; 2.30A {Pyrococcus horikoshii} SCOP: a.137.13.1
Probab=69.15 E-value=2.9 Score=31.82 Aligned_cols=23 Identities=26% Similarity=0.540 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Q 006360 626 NQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 626 ~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
+....++|+++||.|.|||-.+|
T Consensus 5 kv~~vl~ELeRlkveiQRLE~ml 27 (67)
T 1wmi_B 5 KVGDVLKELERLKVEIQRLEAML 27 (67)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 34458999999999999997764
No 451
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=68.77 E-value=9.6 Score=31.34 Aligned_cols=18 Identities=22% Similarity=0.408 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 006360 577 QLFQRTLEETLDSFQKSI 594 (648)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~ 594 (648)
+||+.--.|+|..+|+.+
T Consensus 32 ~YfrqkekEqL~~LKkkl 49 (84)
T 1gmj_A 32 RYFRARAKEQLAALKKHK 49 (84)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345554455544444443
No 452
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=68.65 E-value=5.5 Score=33.98 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=21.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHH
Q 006360 572 SNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIEILR 607 (648)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~~~~r 607 (648)
++=++.-++.-|++ |..=+..+++++..|-++|=+
T Consensus 10 ~~e~~~~lr~ei~~-Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 10 SREEADTLRLKVEE-LEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 55566666655543 333355677888887777755
No 453
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=68.48 E-value=57 Score=30.30 Aligned_cols=65 Identities=14% Similarity=0.196 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHH------HHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 574 FTLQLFQRTLEE------TLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRK 639 (648)
Q Consensus 574 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~ 639 (648)
.+++-+...++| .|..-+.++-+|+.+|+..+- |=+.-+..++.+..++.+++..|..|++++|.
T Consensus 41 k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~-qEr~~r~q~se~~~elq~ri~~L~~El~~~k~ 111 (168)
T 3o0z_A 41 KSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILE-AERRDRGHDSEMIGDLQARITSLQEEVKHLKH 111 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444 566667788889999887654 22333334444555556667777777777765
No 454
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=68.43 E-value=59 Score=35.08 Aligned_cols=105 Identities=19% Similarity=0.146 Sum_probs=59.7
Q ss_pred CCeEEEEEccCCC-EEEEEeCCCeEEEEeCCCCc---eeeEe----e------CCCCeEEEEEeCC----CCEEEEEEc-
Q 006360 82 APTAGISFSSDDK-IIASVGLDKKLYTYDPGSRR---PSSCI----T------YEAPFSSLAFIDD----DWILTAGTS- 142 (648)
Q Consensus 82 ~~V~slafsPdg~-~LaSgs~Dg~I~IWDl~tgk---~v~~~----~------h~~~I~slafsPd----G~~Lasgs~- 142 (648)
...+.|+|.||+. .|+++...|.|++++..... .+.-+ . ....+..|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3568899999985 45566778999999754321 11111 1 1456789999996 443333332
Q ss_pred -C----------CeEEEEECCCC--C-----CceEEEeec--CCCCCeeEEEEccCCCeEEEec
Q 006360 143 -N----------GRVVFYDIRGK--P-----QPLTVLRAC--SSSEAVSSLCWQRAKPVFIDET 186 (648)
Q Consensus 143 -D----------G~V~IWDl~s~--~-----~~~~~l~~~--~h~~~VtsLafspdg~~Las~~ 186 (648)
+ ..|.-|.+... . ....++... ........|+|.|||.+.++.+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG 157 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence 1 14555666431 0 112222211 2223467899999887655543
No 455
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=68.42 E-value=17 Score=38.85 Aligned_cols=10 Identities=30% Similarity=0.428 Sum_probs=3.6
Q ss_pred HHHHHHHHHH
Q 006360 634 IKSLRKENHQ 643 (648)
Q Consensus 634 ~~~lr~e~~~ 643 (648)
|+.|++...+
T Consensus 121 i~~l~~~i~~ 130 (409)
T 1m1j_C 121 ITQLKQKIAQ 130 (409)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 456
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=68.16 E-value=15 Score=34.39 Aligned_cols=60 Identities=13% Similarity=0.321 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHhHHhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 583 LEETLDSFQKSIHEDMRNLHIEIL---RQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQ 643 (648)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~lh~~~~---r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~ 643 (648)
|++.|..++.-+. +|+.+|-++| +.-...+.+|..++.+|......+...++.|.++|.+
T Consensus 48 I~~~i~~i~~~v~-~l~~~~~~~L~~~~~~~~~k~~le~l~~~i~~~a~~ik~~Lk~l~~~~~~ 110 (180)
T 1s94_A 48 IRAMIDKISDNVD-AVKKKHSDILSAPQTDDQMKEELEELMTDIKRTANKVRGKLKTIELNIEQ 110 (180)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4445566655554 7888887766 3444566788888888888888888888888887754
No 457
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=67.27 E-value=6.9 Score=30.39 Aligned_cols=22 Identities=23% Similarity=0.309 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 006360 625 ENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 625 ~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
.+..+|.+||..|+.+.++|++
T Consensus 30 ~~~~~L~~~N~~L~~~i~~L~~ 51 (63)
T 1ci6_A 30 GECKELEKKNEALKERADSLAK 51 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555555555555555543
No 458
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=67.16 E-value=39 Score=33.94 Aligned_cols=49 Identities=14% Similarity=0.198 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 579 FQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQ 627 (648)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~ 627 (648)
+|.-|.--.++++..++++|..|.-.|---...++.-+..=++++...+
T Consensus 49 lr~~L~Py~~el~~~~~~~~eelr~kL~p~~~el~~~l~~~~eeLr~~L 97 (273)
T 3s84_A 49 LQQRLEPYADQLRTQVNTQAEQLRRQLTPYAQRMERVLRENADSLQASL 97 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 3333334444444455555555554444444444443333344444333
No 459
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=67.05 E-value=23 Score=39.21 Aligned_cols=15 Identities=33% Similarity=0.330 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHHHHH
Q 006360 629 ELMKEIKSLRKENHQ 643 (648)
Q Consensus 629 ~l~~e~~~lr~e~~~ 643 (648)
+|.+|+..+++|.+|
T Consensus 562 ~l~~e~~~~~~~~~~ 576 (597)
T 3oja_B 562 ELRQETSLKRQKVKQ 576 (597)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 460
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=66.77 E-value=31 Score=30.32 Aligned_cols=9 Identities=22% Similarity=0.265 Sum_probs=4.4
Q ss_pred HHHHHHHHh
Q 006360 638 RKENHQLRQ 646 (648)
Q Consensus 638 r~e~~~lr~ 646 (648)
+-||++||.
T Consensus 67 ~~e~e~Lr~ 75 (120)
T 3i00_A 67 ADDCEFLRA 75 (120)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 334555554
No 461
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=66.37 E-value=9.6 Score=30.03 Aligned_cols=29 Identities=21% Similarity=0.402 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|.+++-.+.+-.+||+.||++.+++|.+|
T Consensus 27 I~eLE~~L~~kd~eI~eLr~~LdK~qsVl 55 (67)
T 1zxa_A 27 IKELEKRLSEKEEEIQELKRKLHKCQSVL 55 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33333345566678888888888887654
No 462
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=66.36 E-value=4.2 Score=25.09 Aligned_cols=18 Identities=39% Similarity=0.617 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 006360 628 AELMKEIKSLRKENHQLR 645 (648)
Q Consensus 628 ~~l~~e~~~lr~e~~~lr 645 (648)
.||-+|++.|.+....||
T Consensus 4 delykeledlqerlrklr 21 (27)
T 3twe_A 4 DELYKELEDLQERLRKLR 21 (27)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444445444444444443
No 463
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=66.18 E-value=11 Score=30.81 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 006360 624 LENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 624 ~~~~~~l~~e~~~lr~e~~~lr 645 (648)
..++++|.+|+.+|+.++++|.
T Consensus 60 ~~e~~~L~~~~~~L~~~l~~L~ 81 (83)
T 1nkp_B 60 QQDIDDLKRQNALLEQQVRALG 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 4567888889999988877653
No 464
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=66.11 E-value=18 Score=26.86 Aligned_cols=20 Identities=30% Similarity=0.418 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 006360 625 ENQAELMKEIKSLRKENHQL 644 (648)
Q Consensus 625 ~~~~~l~~e~~~lr~e~~~l 644 (648)
+-+.+-++|+..|++|.++|
T Consensus 30 ~~L~~AR~el~~Lkeele~L 49 (51)
T 3m91_A 30 ETLKEARQQLLALREEVDRL 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 33445555666666666665
No 465
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=65.54 E-value=19 Score=39.82 Aligned_cols=72 Identities=15% Similarity=0.202 Sum_probs=46.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhHHhHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HH
Q 006360 570 QGSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHI-----------EILRQFHMQETQMSNVMSSILENQAELMK----EI 634 (648)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lh~-----------~~~r~~~~~~~e~~~~~~~~~~~~~~l~~----e~ 634 (648)
.+.+..++++||.+++-+.++...+|.++..|+- .+++++..|+.-|..-|+. ++++++..+ |+
T Consensus 44 ~~~~~~~e~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-l~~~~g~~~~r~~~~ 122 (526)
T 2de0_X 44 NGLGKDHEILRRRIENGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDLGHHERSIMTDLYY-LSQTDGAGDWREKEA 122 (526)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTTHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHhHHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhchhHHHHHHH
Confidence 4567789999999999999999999999988876 3556666655554444443 222333322 55
Q ss_pred HHHHHHHH
Q 006360 635 KSLRKENH 642 (648)
Q Consensus 635 ~~lr~e~~ 642 (648)
+.|.+..|
T Consensus 123 ~~lt~~vq 130 (526)
T 2de0_X 123 KDLTELVQ 130 (526)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55544444
No 466
>2j4b_A TAF5, transcription initiation factor TFIID subunit 72/ kDa; WD repeat; 2.5A {Encephalitozoon cuniculi} SCOP: d.379.1.1
Probab=65.50 E-value=4.2 Score=36.77 Aligned_cols=63 Identities=13% Similarity=0.234 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH----hHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 574 FTLQLFQRTLEETLDSFQKSIHED----MRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLR 638 (648)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr 638 (648)
-++..|++-|++.+|-+|.++++= +.-++|||++.+|. .|-+..++.+..+.....++|++|+
T Consensus 10 ~~y~~L~~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g~~--~~A~~F~~~f~~~~~~~~~~i~~L~ 76 (138)
T 2j4b_A 10 TSYVSLKTWIEDSLDLFKNDLLPLLYPLFIHIYFDLIQQNKT--DEAKEFFEKYRGDHYNKSEEIKQFE 76 (138)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHGGGHHHHHHHHHHHHHHTTCH--HHHHHHHHHHGGGC--CHHHHHHHT
T ss_pred HHHHHHHHHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHCCCh--HHHHHHHHHHhHHHhhHHHHHHHHh
Confidence 456899999999999999887664 45689999999988 5677888888877766677788776
No 467
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=65.48 E-value=40 Score=30.75 Aligned_cols=55 Identities=22% Similarity=0.213 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhHHhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 587 LDSFQKSIHEDMRNLHIEILRQF---HMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 587 ~~~~~~~~~~~~~~lh~~~~r~~---~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr 645 (648)
|-.-...+...++.|..+|--.. ..++.|+..+ .-.+..|.+.++.|++||++|=
T Consensus 73 L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aL----qlq~n~lE~kl~kLq~EN~~LV 130 (152)
T 3a7p_A 73 LQKELKSKEQEIRRLKEVIALKNKNTERLNAALISG----TIENNVLQQKLSDLKKEHSQLV 130 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 33345566777888887765444 4455555444 3335677888888888888773
No 468
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=65.25 E-value=10 Score=35.29 Aligned_cols=26 Identities=15% Similarity=0.307 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHhh
Q 006360 622 SILENQAELMKEI-KSLRKENHQLRQL 647 (648)
Q Consensus 622 ~~~~~~~~l~~e~-~~lr~e~~~lr~~ 647 (648)
+|..+++-+.+|+ +++++..++||+-
T Consensus 132 elR~kl~P~~eeL~~~~~~~~eeLr~k 158 (165)
T 1gs9_A 132 ELRVRLASHLRKLRKRLLRDADDLQKR 158 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 4444444555554 4555566666653
No 469
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=64.89 E-value=1.2e+02 Score=30.54 Aligned_cols=200 Identities=8% Similarity=0.034 Sum_probs=101.1
Q ss_pred CCCCEEEEEECCCcEEEEECCCCcee-------EEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC---CCCCc-
Q 006360 4 CKDEHLASISLSGDLILHNLASGAKA-------AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT---TGRSP- 72 (648)
Q Consensus 4 pdG~~Lasgs~DG~V~IwDl~sg~~i-------~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl---~t~~~- 72 (648)
|+..++++.+.+|.|+--.+..-+.. ..+.....+.+..+......+ .|+..+..|.++-+.. .....
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~-~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHD-HILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTC-EEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCC-EEEEEECCCEEEEEEhhHCcCCCCC
Confidence 45678889999999987776432211 111111233333333333333 4555577788766554 21110
Q ss_pred -e-eE---Eec-cCCCCeEEEEEc---cCCCEEEEEeCCCeEEEEeCCC-------CceeeEeeCCCCeEEEEEeCCCCE
Q 006360 73 -K-VS---WLK-QHSAPTAGISFS---SDDKIIASVGLDKKLYTYDPGS-------RRPSSCITYEAPFSSLAFIDDDWI 136 (648)
Q Consensus 73 -~-v~---~l~-~H~~~V~slafs---Pdg~~LaSgs~Dg~I~IWDl~t-------gk~v~~~~h~~~I~slafsPdG~~ 136 (648)
. .. .+. ...+.|..+..- .++.+++.++.+|.++...+.. +.....+...+.+..+....+...
T Consensus 80 a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDE 159 (307)
T ss_dssp SCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCE
T ss_pred CCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCE
Confidence 0 10 111 223446555432 3567899999999999987642 111111223466666666555667
Q ss_pred EEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEeeCCCeEEcCCCCCC
Q 006360 137 LTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (648)
Q Consensus 137 Lasgs~DG~V~IWDl~s~~~~~~~l~~~~h~~~VtsLafspdg~~Las~~~~~~~~~lvs~s~D~~IkvWDlr~~ 211 (648)
|+..+.+|.+..++...-.. .. .....+..+.+..+...+... ...+...++..+..|.++..++..|
T Consensus 160 i~l~T~~G~~irf~~~~v~~----~g--r~a~Gv~~i~L~~~d~Vv~~~-~~~~~~~ll~~T~~G~~Kr~~~~e~ 227 (307)
T 1zi0_A 160 VMLFSAEGKVVRFKESSVRA----MG--CNTTGVRGIRLGEGDKVVSLI-VPRGDGAILTATQNGYGKRTAVAEY 227 (307)
T ss_dssp EEEEETTSEEEEEEGGGSCB----CC--TTCCCEECCCCCTTCCEEEEE-CCCSSCEEEEEETTSEEEEECGGGS
T ss_pred EEEECCCCcEEEEEHHHcCc----cC--CCCCCeEeEEeCCCCEEEEEE-EecCCCEEEEEEcCCceEEEEHHHh
Confidence 88899999988887754210 00 011223333333333332221 1112234555566777777766444
No 470
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=64.83 E-value=30 Score=38.28 Aligned_cols=13 Identities=31% Similarity=0.365 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHH
Q 006360 633 EIKSLRKENHQLR 645 (648)
Q Consensus 633 e~~~lr~e~~~lr 645 (648)
.+++|++||+.+|
T Consensus 559 ~~~~l~~e~~~~~ 571 (597)
T 3oja_B 559 KQAELRQETSLKR 571 (597)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444444
No 471
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=64.80 E-value=53 Score=27.39 Aligned_cols=40 Identities=15% Similarity=0.293 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 006360 609 FHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQLL 648 (648)
Q Consensus 609 ~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~~ 648 (648)
|...-.+++..+++...+.+.|.-|+..|+.+.++||.-|
T Consensus 54 ye~~i~~Lr~~i~~~~~ek~~l~~e~dnl~~~~~~~k~KL 93 (93)
T 3s4r_A 54 YEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKL 93 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 4444556666677777788888999999999999998754
No 472
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=64.60 E-value=13 Score=30.42 Aligned_cols=26 Identities=23% Similarity=0.217 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 620 MSSILENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 620 ~~~~~~~~~~l~~e~~~lr~e~~~lr 645 (648)
++...++++.|.+||+.||+=-+++.
T Consensus 55 ie~l~eEi~~lk~en~eL~elae~~q 80 (83)
T 1uii_A 55 IEQKDNEIARLKKENKELAEVAEHVQ 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455666777777777776555544
No 473
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=64.48 E-value=18 Score=43.69 Aligned_cols=18 Identities=22% Similarity=0.383 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 006360 629 ELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 629 ~l~~e~~~lr~e~~~lr~ 646 (648)
+|.+.|..|++||+.||+
T Consensus 1020 ~L~~kv~~L~~e~~~L~q 1037 (1080)
T 2dfs_A 1020 ETEQLVSELKEQNTLLKT 1037 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444445554444
No 474
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=63.65 E-value=15 Score=30.68 Aligned_cols=37 Identities=19% Similarity=0.356 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 606 LRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 606 ~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
+.|-+.++.|...+..+ ++.|.+|+.++.+|.+.+++
T Consensus 47 ~~q~~~LE~e~~~L~~e----~~~L~~e~~~~~~e~d~~k~ 83 (90)
T 2wt7_B 47 VQQKHHLENEKTQLIQQ----VEQLKQEVSRLARERDAYKV 83 (90)
T ss_dssp HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 34556666666665444 44566666666666665554
No 475
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=63.53 E-value=42 Score=37.64 Aligned_cols=63 Identities=17% Similarity=0.299 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHh
Q 006360 584 EETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELM-----KEIKSLRKENHQLRQ 646 (648)
Q Consensus 584 ~~~~~~~~~~~~~~~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~-----~e~~~lr~e~~~lr~ 646 (648)
+..|..-+++..+.|+-|+-.|-+-=+.+..|+..+++.=+.+|++|+ +|.+.|++|.++|++
T Consensus 514 ~~~~~~~~~~~~e~~~ql~~kme~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ei~~l~~ 581 (592)
T 1f5n_A 514 EQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQT 581 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555566666666777766666666677777777776666666665 468888888888876
No 476
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=62.92 E-value=7 Score=30.83 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006360 615 QMSNVMSSILENQAELMKEIKSLRKENHQLRQL 647 (648)
Q Consensus 615 e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~~ 647 (648)
|+..++..=.+...+|..++..=..|+++||..
T Consensus 15 ~~~~~i~~Kde~I~eLE~~L~~kd~eI~eLr~~ 47 (67)
T 1zxa_A 15 DFAKILMLKEERIKELEKRLSEKEEEIQELKRK 47 (67)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333444455555555555555555544
No 477
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=62.70 E-value=50 Score=28.43 Aligned_cols=28 Identities=18% Similarity=0.394 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 617 SNVMSSILENQAELMKEIKSLRKENHQL 644 (648)
Q Consensus 617 ~~~~~~~~~~~~~l~~e~~~lr~e~~~l 644 (648)
+...+.+.++..+|.++++.|.++|++|
T Consensus 82 RadREkl~~eKe~L~~ql~~Lq~q~~~l 109 (110)
T 2v4h_A 82 RHAREKLVEKKEYLQEQLEQLQREFNKL 109 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhHHHHHhHHHHHHHHHHHHHHHHHhc
Confidence 4566777888888888888888888775
No 478
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=62.46 E-value=74 Score=27.21 Aligned_cols=52 Identities=12% Similarity=0.245 Sum_probs=39.1
Q ss_pred HHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 592 KSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQL 644 (648)
Q Consensus 592 ~~~~~~~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~l 644 (648)
+.++.+|..|| +|..++.++=.|+-.+++.|..|+..-.+.++.=.+|.++-
T Consensus 24 ~~Ie~~I~eL~-~iF~dla~lV~eQge~Id~Ie~nv~~a~~~v~~g~~eL~kA 75 (109)
T 3hd7_B 24 IKLENSIRELH-DMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKA 75 (109)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777777777 66777777778888999999998888777777666655543
No 479
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=62.35 E-value=57 Score=25.86 Aligned_cols=22 Identities=23% Similarity=0.382 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 006360 624 LENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 624 ~~~~~~l~~e~~~lr~e~~~lr 645 (648)
..++.+|+.-|++|+-|.+-||
T Consensus 55 k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 55 KQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhc
Confidence 3345566666666666666665
No 480
>2xus_A Breast cancer metastasis-suppressor 1; protein binding; 1.912A {Homo sapiens}
Probab=62.04 E-value=17 Score=26.75 Aligned_cols=38 Identities=16% Similarity=0.281 Sum_probs=24.9
Q ss_pred HHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 592 KSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRK 639 (648)
Q Consensus 592 ~~~~~~~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~ 639 (648)
.+.-.||-+|. |||..++..| |.++++.|.+|++.|+.
T Consensus 9 ~e~ld~l~~LE----kqF~~LkEql------Y~ERl~ql~~~Leel~~ 46 (49)
T 2xus_A 9 SECVSEMLDLE----KQFSELKEKL------FRERLSQLRLRLEEVGA 46 (49)
T ss_dssp HHHHHHHHHHH----HHHHHHHHHH------HHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHH----HHHHHHHHHH------HHHHHHHHHHHHHHHHc
Confidence 34445555544 8999877765 67777777777776654
No 481
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=61.73 E-value=57 Score=32.72 Aligned_cols=56 Identities=9% Similarity=0.200 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 579 FQRTLEETLDSFQKSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEI 634 (648)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~ 634 (648)
+|.-|.-...+++..++.+|..|+--|.--...++.-+..=++++.+.++-+.+|+
T Consensus 71 lr~kL~p~~~el~~~l~~~~eeLr~~L~p~~eelr~kl~~~veelk~~L~Py~eel 126 (273)
T 3s84_A 71 LRRQLTPYAQRMERVLRENADSLQASLRPHADELKAKIDQNVEELKGRLTPYADEF 126 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHhHHHHH
Confidence 34444444445555555555555555544444555545554555554444444444
No 482
>1a93_A Coiled coil, LZ, MYC proto-oncogene protein; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Homo sapiens} SCOP: h.1.3.1 PDB: 2a93_A
Probab=61.62 E-value=6.8 Score=26.64 Aligned_cols=21 Identities=33% Similarity=0.526 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 006360 626 NQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 626 ~~~~l~~e~~~lr~e~~~lr~ 646 (648)
+-..|..|-+.||+.|+||++
T Consensus 8 dE~kLl~ekE~l~~r~eqL~~ 28 (34)
T 1a93_A 8 EEQKLISEEDLLRKRREQLKH 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334556666666666666655
No 483
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=61.30 E-value=17 Score=23.46 Aligned_cols=22 Identities=41% Similarity=0.452 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 006360 625 ENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 625 ~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
.+.+-|.+|+.+|+=|..-|.|
T Consensus 9 qeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 9 QEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 3456778888888877777765
No 484
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=61.25 E-value=26 Score=42.23 Aligned_cols=41 Identities=15% Similarity=0.082 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 605 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 605 ~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr 645 (648)
+.+....+|.+...+.+++.+++.+|.+|++.||++.++|-
T Consensus 1003 ~~ke~~~lee~~~~~~~~L~~kv~~L~~e~~~L~qq~~~l~ 1043 (1080)
T 2dfs_A 1003 TQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELN 1043 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666777777888888888888888888887775
No 485
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=61.24 E-value=1.6e+02 Score=30.82 Aligned_cols=163 Identities=11% Similarity=0.119 Sum_probs=95.2
Q ss_pred cEEEEECCCC--ceeEEEeCC-----CCCcEEEEEEc---cC---CCeEEEEEe-CCCeEEEEECCCCCceeEEec----
Q 006360 17 DLILHNLASG--AKAAELKDP-----NEQVLRVLDYS---RN---SRHLLVTAG-DDGTLHLWDTTGRSPKVSWLK---- 78 (648)
Q Consensus 17 ~V~IwDl~sg--~~i~~l~~~-----~~~~V~~Vafs---pd---g~~lLaSgs-~Dg~V~IWDl~t~~~~v~~l~---- 78 (648)
+|.+||+.+. +.++.+.-. ....+..+.+. ++ ++.+++... ...-|.|||+.+++. .+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~s-wRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDS-WNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEE-EEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcE-EEEccCCCc
Confidence 6889999999 888877642 23456777776 22 133444444 467799999987653 22221
Q ss_pred ----------cC----CCCeEEEEEccC----CCEEEEEeCCC-eEEEEe---CCC---CceeeEeeCCC---CeEEEEE
Q 006360 79 ----------QH----SAPTAGISFSSD----DKIIASVGLDK-KLYTYD---PGS---RRPSSCITYEA---PFSSLAF 130 (648)
Q Consensus 79 ----------~H----~~~V~slafsPd----g~~LaSgs~Dg-~I~IWD---l~t---gk~v~~~~h~~---~I~slaf 130 (648)
+. ...|..|+++|+ ++.|+.....+ .++-.. ++. ...+..++..+ ....+++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 10 246888999987 67777666555 333332 122 22344444333 3445667
Q ss_pred e-CCCCEEEEEEcCCeEEEEECCC-CC--CceEEEeecCCCCCeeEEEEccCCC
Q 006360 131 I-DDDWILTAGTSNGRVVFYDIRG-KP--QPLTVLRACSSSEAVSSLCWQRAKP 180 (648)
Q Consensus 131 s-PdG~~Lasgs~DG~V~IWDl~s-~~--~~~~~l~~~~h~~~VtsLafspdg~ 180 (648)
+ .+|.++++--....|..|+..+ .- .-..++.....-..+..+.+..+|.
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~ 336 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGG 336 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSC
T ss_pred eCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCe
Confidence 5 5677666667788899999986 21 1223333222334566677665543
No 486
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=60.85 E-value=9.1 Score=31.30 Aligned_cols=20 Identities=30% Similarity=0.315 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 006360 627 QAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 627 ~~~l~~e~~~lr~e~~~lr~ 646 (648)
+.+|.++++.|++||++||+
T Consensus 52 I~~Lq~~~~~L~~e~~~L~~ 71 (82)
T 1am9_A 52 IRFLQHSNQKLKQENLSLRT 71 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555543
No 487
>1bb1_B Designed, thermostable heterotrimeric coiled coil; de novo protein design; 1.80A {Synthetic construct} SCOP: k.7.1.1
Probab=60.46 E-value=17 Score=23.84 Aligned_cols=25 Identities=28% Similarity=0.506 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 621 SSILENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 621 ~~~~~~~~~l~~e~~~lr~e~~~lr 645 (648)
-.|.|+|+-..+|++++++|.--+.
T Consensus 5 aaikeeqaaieeeiqaikeeiaaik 29 (36)
T 1bb1_B 5 AAIKEEQAAIEEEIQAIKEEIAAIK 29 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578889999999999999976554
No 488
>2nps_B Syntaxin 13, vesicle-associated membrane protein 4; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Rattus norvegicus}
Probab=60.16 E-value=57 Score=25.53 Aligned_cols=53 Identities=11% Similarity=0.244 Sum_probs=40.7
Q ss_pred HHHHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 592 KSIHEDMRNLHIEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 592 ~~~~~~~~~lh~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr 645 (648)
+.|..+|..|| +|.+++..+=.|+-.+++.|..|+..-..-++.=.+|..+-+
T Consensus 9 ~~ie~~i~eL~-~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~eL~kA~ 61 (71)
T 2nps_B 9 QQLEADILDVN-QIFKDLAMMIHDQGDLIDSIEANVESSEVHVERASDQLQRAA 61 (71)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666666 677788888888999999999999988888887777765543
No 489
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=59.60 E-value=1.6e+02 Score=30.28 Aligned_cols=143 Identities=13% Similarity=0.116 Sum_probs=76.7
Q ss_pred CCEEEEEECCCcEEEEECCCCc-----------eeEEEeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC----
Q 006360 6 DEHLASISLSGDLILHNLASGA-----------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR---- 70 (648)
Q Consensus 6 G~~Lasgs~DG~V~IwDl~sg~-----------~i~~l~~~~~~~V~~Vafspdg~~lLaSgs~Dg~V~IWDl~t~---- 70 (648)
..+.+.-..||.|+.|-..... ....+.......|..|+... . ..+....||.|+.|=....
T Consensus 116 ~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~--~-hs~alt~~G~v~~wG~n~~GqLG 192 (389)
T 3kci_A 116 GKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG--A-HSACVTAAGDLYTWGKGRYGRLG 192 (389)
T ss_dssp CSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECS--S-EEEEEETTSCEEEEECCGGGTTC
T ss_pred CCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCc--C-eEEEEeCCCeEEEeCCCCCCCcC
Confidence 4455666789999999653211 11122221223455555432 2 3455568899999965221
Q ss_pred ----Cc--eeEEecc-CCCCeEEEEEccCCCEEEEEeCCCeEEEEeCCC-Cc---------ee-eEee--CCCCeEEEEE
Q 006360 71 ----SP--KVSWLKQ-HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-RR---------PS-SCIT--YEAPFSSLAF 130 (648)
Q Consensus 71 ----~~--~v~~l~~-H~~~V~slafsPdg~~LaSgs~Dg~I~IWDl~t-gk---------~v-~~~~--h~~~I~slaf 130 (648)
.. ....+.. ....|..++......+.+....||.|+.|-... ++ .. ..+. ....|..++.
T Consensus 193 ~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~ 272 (389)
T 3kci_A 193 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 272 (389)
T ss_dssp SSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred CCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeC
Confidence 00 0111111 223566666644346677778899999996532 11 01 1111 1224555555
Q ss_pred eCCCCEEEEEEcCCeEEEEECCC
Q 006360 131 IDDDWILTAGTSNGRVVFYDIRG 153 (648)
Q Consensus 131 sPdG~~Lasgs~DG~V~IWDl~s 153 (648)
. ..+.++-..||.|+.|-...
T Consensus 273 G--~~hs~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 273 G--SQFSVALTKSGAVYTWGKGD 293 (389)
T ss_dssp E--TTEEEEEETTSCEEEEECCG
T ss_pred C--CCEEEEEeCCCeEEEEeCCC
Confidence 3 34556667899999997654
No 490
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=59.18 E-value=22 Score=39.92 Aligned_cols=49 Identities=14% Similarity=0.233 Sum_probs=26.5
Q ss_pred HHHHhHHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 006360 594 IHEDMRNLHIEILRQFHMQETQMSNVM-SSILENQAELMKEIKSLRKENH 642 (648)
Q Consensus 594 ~~~~~~~lh~~~~r~~~~~~~e~~~~~-~~~~~~~~~l~~e~~~lr~e~~ 642 (648)
|.+|.+++--|.=|+-.---.|+..+| +.+.++...|.+||+.|++++.
T Consensus 535 me~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ei~~l~~~~~ 584 (592)
T 1f5n_A 535 MENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMR 584 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 333444444333333333333444555 5567777777778888877654
No 491
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=58.96 E-value=90 Score=27.08 Aligned_cols=25 Identities=16% Similarity=0.255 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 622 SILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 622 ~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
++.+++..|..+++-.-.|.+|||+
T Consensus 75 eLqgEI~~Lnq~Lq~a~ae~erlr~ 99 (121)
T 3mq7_A 75 ELEGEITTLNHKLQDASAEVERLRR 99 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333444444444456677775
No 492
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=58.83 E-value=9.3 Score=26.72 Aligned_cols=20 Identities=40% Similarity=0.586 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 006360 627 QAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 627 ~~~l~~e~~~lr~e~~~lr~ 646 (648)
++.|..||..|..||+-|..
T Consensus 5 vaqlenevaslenenetlkk 24 (49)
T 3he5_A 5 VAQLENEVASLENENETLKK 24 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccHHHHH
No 493
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=58.32 E-value=12 Score=29.00 Aligned_cols=27 Identities=19% Similarity=0.305 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 616 MSNVMSSILENQAELMKEIKSLRKENH 642 (648)
Q Consensus 616 ~~~~~~~~~~~~~~l~~e~~~lr~e~~ 642 (648)
|..-.+.+..+.++|..||.+||++..
T Consensus 35 Le~~v~~L~~eN~~L~~ev~~Lr~~l~ 61 (63)
T 2dgc_A 35 LEDKVEELLSKNYHLENEVARLKKLVG 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444445566777777777777654
No 494
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=58.07 E-value=7 Score=32.79 Aligned_cols=17 Identities=29% Similarity=0.245 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHh
Q 006360 630 LMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 630 l~~e~~~lr~e~~~lr~ 646 (648)
-.+||.+||.|+++..+
T Consensus 73 YEeEI~rLr~eLe~r~~ 89 (92)
T 3vp9_A 73 YEEEIKHLKLGLEQRDH 89 (92)
T ss_dssp HHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 46788899988887654
No 495
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=58.02 E-value=26 Score=27.95 Aligned_cols=21 Identities=19% Similarity=0.082 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 006360 626 NQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 626 ~~~~l~~e~~~lr~e~~~lr~ 646 (648)
.+++|.+|+....+|+++||.
T Consensus 41 ~I~eLEk~L~ekd~eI~~Lqs 61 (72)
T 3nmd_A 41 LIDELELELDQKDELIQMLQN 61 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555555554
No 496
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=57.90 E-value=36 Score=30.64 Aligned_cols=50 Identities=12% Similarity=0.197 Sum_probs=0.0
Q ss_pred HhHHhHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 597 DMRNLHIEILRQFHMQETQMSNVM---SSILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 597 ~~~~lh~~~~r~~~~~~~e~~~~~---~~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
+++.-+-+|.++....+.|+..+- -+...+.+++.+|++.|++||+.|..
T Consensus 72 k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~ 124 (138)
T 3hnw_A 72 KAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQK 124 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 497
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=57.80 E-value=6.2 Score=39.14 Aligned_cols=23 Identities=26% Similarity=0.432 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 006360 624 LENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 624 ~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
..+++.|.+++++||+|+++||.
T Consensus 67 ~arNe~L~~~Lk~ar~El~~Lke 89 (251)
T 3m9b_A 67 AARNSKLMETLKEARQQLLALRE 89 (251)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455555555555555543
No 498
>3f5h_A Type I polyketide synthase PIKAIII, type I polyketide synthase pikaiv fusion protein...; docking domain, pikromycin, H2-T2; 1.75A {Streptomyces venezuelae}
Probab=56.70 E-value=37 Score=26.79 Aligned_cols=43 Identities=19% Similarity=0.235 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006360 603 IEILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 645 (648)
Q Consensus 603 ~~~~r~~~~~~~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr 645 (648)
++|+||-.+-++-|..--+.+.+-+.....|++++|++++++.
T Consensus 19 ~~~~~~~~~~~~tM~~~eekLrdyLrrvtadL~~aR~rLrelE 61 (68)
T 3f5h_A 19 EALIRMALGPRNTMTSSNEQLVDALRASLKENEELRKESRRRA 61 (68)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777776666654445555556667777777777777664
No 499
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=56.02 E-value=14 Score=32.35 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006360 614 TQMSNVMSSILENQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 614 ~e~~~~~~~~~~~~~~l~~e~~~lr~e~~~lr~ 646 (648)
.|+...++.-.+++..|.++++.|.+|.+|.|+
T Consensus 85 ~~l~~~~~~e~~~~~~L~~~i~~Le~el~~~R~ 117 (117)
T 3kin_B 85 EEWKKKYEKEKEKNKALKSVIQHLEVELNRWRN 117 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
No 500
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=55.91 E-value=13 Score=25.24 Aligned_cols=21 Identities=24% Similarity=0.430 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 006360 626 NQAELMKEIKSLRKENHQLRQ 646 (648)
Q Consensus 626 ~~~~l~~e~~~lr~e~~~lr~ 646 (648)
+.....++|..||++|..|+.
T Consensus 8 Kn~a~qqDIddlkrQN~~Le~ 28 (34)
T 1a93_B 8 KNDTHQQDIDDLKRQNALLEQ 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHhhHhhHHHHHHHHHHHHH
Done!