BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006364
(648 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/647 (70%), Positives = 546/647 (84%), Gaps = 3/647 (0%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
MNMYCK+G FD+AL +F NLNNPDIVSWNTVLSGF++SDDAL+FALRMN GV FDAVT
Sbjct: 120 MNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSDDALNFALRMNFTGVAFDAVTC 179
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+T L+FC DHEGF+FG QLHS I+K GLD EV+VGNALITMYSR RLVEARRVFDEM N
Sbjct: 180 TTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRN 239
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
KD VSWNA+LSGY Q+G+ G+EAIL +EM+++G++LDHVSFT A SACGH K ELG+Q
Sbjct: 240 KDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQ 299
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAV 240
IH +++K+GY THV V NVL+STYSKCE DA VF + DRNV+SWTTMIS++ EDA
Sbjct: 300 IHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEEDAT 359
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
SLF EMR DGV PNDVTF+GLIHAI++ NLV+EG+MIHG+C+KT+FLSE +V N LITMY
Sbjct: 360 SLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMY 419
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
A+FESM DS KVF+EL+ REIISWN+LISGYAQNGL A+Q F + ES+PN +TFGS
Sbjct: 420 AKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMESRPNEFTFGS 479
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
VL+++ +AE IS++HGQRCHSHI+K+GL+++PIV SALLDMY KRGSI ES VF+ET
Sbjct: 480 VLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPL 539
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
K+E AWTAIISA ARHGDYE+VMN FK+ME +GV+PDSITFL+V+T CGR GM+ G L
Sbjct: 540 KNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQL 599
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
F+SM+KD+ IEPSP+HYS MVDMLGR GRL+EAEE VGQIPGG GLSVLQSLLGACRIHG
Sbjct: 600 FNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHG 659
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
NV+M +R+AD L++MEP GSGSYVLMSNLYAEKG+WE VA +RKGM+ +GVRKE+GFSW
Sbjct: 660 NVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWV 719
Query: 601 DVGDIDG---LHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
DVGD DG LHGFSS D HP+SEEIYRMAE LG EMK+L +R+R
Sbjct: 720 DVGDADGSLYLHGFSSDDKFHPQSEEIYRMAETLGLEMKFLEKERKR 766
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 156/565 (27%), Positives = 264/565 (46%), Gaps = 62/565 (10%)
Query: 40 DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALI 99
D L+ +G + D VT + L C G Q+H+ + G S V V N+L+
Sbjct: 64 DLFKKQLQWGFVGNI-DQVTVAIVLKACCGDSKL--GCQIHAFAISSGFISHVTVPNSLM 120
Query: 100 TMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH 159
MY + G A VF+ + N D VSWN +LSG+ + D A+ + M G+ D
Sbjct: 121 NMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSDD----ALNFALRMNFTGVAFDA 176
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR 219
V+ T+ + C + G Q+H +K G V VGN L++ YS+C +A +VF
Sbjct: 177 VTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDE 236
Query: 220 MHDRNVISWTTMISMNRE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE 273
M +++++SW M+S + +A+ +F EM +G+ + V+F G I A G +
Sbjct: 237 MRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFEL 296
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
GR IH L +K + + VCN LI+ Y++ E ++D++ VF+ + R ++SW +IS +
Sbjct: 297 GRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEE 356
Query: 334 NGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
+ SL GV PN TF +++A+ + + GQ H +K S+
Sbjct: 357 DATSLFNEMRRDGVY----PNDVTFVGLIHAITMKNLV--EEGQMIHGVCVKTSFLSELN 410
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE--MEN 451
V ++L+ MY K S+ +S +VF E + +W ++IS A++G ++ + F ME+
Sbjct: 411 VSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMES 470
Query: 452 KGVRPDSITFLSVLTVCGRNGMI--HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
RP+ TF SVL+ I G+ +LK + +P S ++DM + G
Sbjct: 471 ---RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILK-LGLNTNPIVSSALLDMYAKRGS 526
Query: 510 LEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNL 569
+ E+ + + P +K E A + + +
Sbjct: 527 ICESLGVFSETP-------------------------------LKNEVA----WTAIISA 551
Query: 570 YAEKGDWEMVAILRKGMKSKGVRKE 594
+A GD+E V L K M+ +GV+ +
Sbjct: 552 HARHGDYEAVMNLFKDMEREGVKPD 576
>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/651 (69%), Positives = 533/651 (81%), Gaps = 8/651 (1%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
MNMYCKSGQF KALCIF NL +PDIVSWNTVLSG + S+DA SFA +MN GVVFDAVTY
Sbjct: 106 MNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSGCQTSEDAFSFACKMNSSGVVFDAVTY 165
Query: 61 STALSFCLDH--EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+T LSFC H FL GLQLHS IVKFG D EV+VGNALI+MYSRWG LVEARRVF+EM
Sbjct: 166 TTVLSFCWRHVEAYFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEM 225
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+D VSWNA++SGY+Q+G YG+EAI ++M R G+ LD +SFTSA SACG+EKNLEL
Sbjct: 226 KTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELA 285
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED 238
+QIHG+SIK + HV+V NVL+STY KC+V DA VF+ M++RNV+SWTTMIS++ +
Sbjct: 286 RQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMISIDEAE 345
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
AVS F EMRLDGV PNDVTF+GLIHAI+IG LV +G+M+HG C KT F S+ +VCN +IT
Sbjct: 346 AVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIIT 405
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTF 358
MYA+F+SMQDS KVF EL ++II+WNALISG+ NGL A++AFF + ESKPN Y+F
Sbjct: 406 MYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIESKPNQYSF 465
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
GS+LNA+GAAED+SLK+GQRCHS IIK+GL++DPIV SALLDMY KRGSI ESQ+VF ET
Sbjct: 466 GSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVET 525
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
++S+FAWT IISA ARHGDYESVMN F+EM VRPDSITFLS+LT CGR GM+ G
Sbjct: 526 PQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGC 585
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRI 538
HLF SM+KDY IEPS +HYSC+VDMLGR GRLEEAE L+ IPGGPGLSVLQSLLGACR+
Sbjct: 586 HLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLGACRV 645
Query: 539 HGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
HGNV+MGER+ADALM+MEP SGSYVLMSNLYAE G WEMVA +RK M+ KGV+KEVGFS
Sbjct: 646 HGNVDMGERVADALMEMEPTESGSYVLMSNLYAEIGKWEMVAKVRKRMRVKGVKKEVGFS 705
Query: 599 WADVGDID---GLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAI 646
W DVG ID LHGFSSGD +HP+SE I RMAECLG EMK+L RE I
Sbjct: 706 WVDVGGIDSSLSLHGFSSGDTSHPQSEAICRMAECLGFEMKFL---REEEI 753
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 236/500 (47%), Gaps = 29/500 (5%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T + AL C + L G Q+H + + V N+L+ MY + G+ +A +F
Sbjct: 65 DEFTVANALKACRGYP--LLGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIF 122
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH--EK 173
+ + + D VSWN +LSG D A +M G+ D V++T+ S C E
Sbjct: 123 ENLTHPDIVSWNTVLSGCQTSED----AFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEA 178
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+G Q+H +K G+ V VGN L+S YS+ +A +VF M R+++SW MIS
Sbjct: 179 YFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMIS 238
Query: 234 MNRE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ +A+S+F +M G+ + ++F + A ++ R IHGL IKT
Sbjct: 239 GYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHE 298
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+V N LI+ Y + + ++D+ VF ++ R ++SW +IS +S GV
Sbjct: 299 KHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMISIDEAEAVSFFNEMRLDGV 358
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
PN TF +++A+ E + G+ H K G S V ++++ MY K S
Sbjct: 359 Y----PNDVTFVGLIHAITIGELVV--QGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKS 412
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE--MENKGVRPDSITFLSVL 465
+ +S +VF E + + AW A+IS +G + + F +E+K P+ +F S+L
Sbjct: 413 MQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIESK---PNQYSFGSIL 469
Query: 466 TVCG--RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
G + + G+ ++K + P S ++DM + G + E++++ + P
Sbjct: 470 NAIGAAEDVSLKYGQRCHSQIIK-LGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQ 528
Query: 524 PGLSVLQSLLGACRIHGNVE 543
+ +++ A HG+ E
Sbjct: 529 SQFA-WTTIISAYARHGDYE 547
>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Cucumis sativus]
Length = 781
Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/648 (66%), Positives = 531/648 (81%), Gaps = 5/648 (0%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
MNMYCKSGQ ++A +F NL++PDIVSWNT+LSGFEKS++ALSFALRMNL GV FD+VTY
Sbjct: 115 MNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEKSENALSFALRMNLNGVKFDSVTY 174
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+TALSFCLD E FLFG QLH+L +K G +V+VGNAL+TMYSRW LV+AR+VFDEMP+
Sbjct: 175 TTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPS 234
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D VSW+A+++GY Q+GD G++AIL ++M+R+G++ D+V T A S CGHE+NLELGKQ
Sbjct: 235 RDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQ 294
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAV 240
IH +++K G+ TH SVGNVL+STYSKCE+ DA VF ++DRNVISWTTMIS+ E AV
Sbjct: 295 IHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAV 354
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
SLF +MRLDGV PNDVTFIGL+HAI+I N+V++G M+HGLCIK +F+SE +V N LITMY
Sbjct: 355 SLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMY 414
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
A+FE MQD+ +VF EL REIISWNALISGYAQN L A++AF I E KPN YTFGS
Sbjct: 415 AKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAIMEYKPNEYTFGS 474
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
VLNA+ A EDISLKHGQRCHSH+IKVGL+ DPI+ ALLDMY KRGSI ESQRVFNET +
Sbjct: 475 VLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSK 534
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+S+FAWTA+IS A+HGDYESV+ F+EME + ++PD++ FLSVLT C RN M+ GR
Sbjct: 535 QSQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQF 594
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
F+ M+KD+ IEP +HYSCMVDMLGR GRLEEAEE++ +IPGGPG+S LQSLLGACR HG
Sbjct: 595 FNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLGACRTHG 654
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
NVEM ERIA+ LMK EP SG YVLMSNLYA+KGDWE VA +RK M+ +GV KE+GFSW
Sbjct: 655 NVEMAERIANDLMKKEPLESGPYVLMSNLYAQKGDWEKVAKVRKEMRERGVMKEIGFSWV 714
Query: 601 DVGDIDG----LHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
DVG+ LHGFSSGD +HP+SEEI+RMA+ +G+EMK+L RER
Sbjct: 715 DVGNFGASNLYLHGFSSGDVSHPQSEEIFRMAKYMGAEMKFLKD-RER 761
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 177/628 (28%), Positives = 290/628 (46%), Gaps = 75/628 (11%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSF---ALRMNLIGVVFDA 57
+ +S Q D L F+ P+ S+N VL + D A L F R L G D
Sbjct: 19 FFRSFQHDHNL--FDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNA-DE 75
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T AL C GF G Q+H ++ G S + V N+L+ MY + G+L A VF
Sbjct: 76 FTLVLALKACC---GFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQ 132
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ + D VSWN ILSG+ + + A+ + M G++ D V++T+A S C +
Sbjct: 133 NLHDPDIVSWNTILSGFEKSEN----ALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFL 188
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G Q+H +++K G+ V VGN L++ YS+ E DA KVF M R+ +SW+ MI+
Sbjct: 189 FGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYA 248
Query: 237 ED------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++ A+ +F +M +GV ++V G + ++ G+ IH L +KT +
Sbjct: 249 QEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHT 308
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
SV N LI+ Y++ E ++D++ VF+ ++ R +ISW +IS Y + +SL GV
Sbjct: 309 SVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMRLDGVY-- 366
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
PN TF +L+A+ + + G H IK S+ VG++L+ MY K + +
Sbjct: 367 --PNDVTFIGLLHAITIRNMV--EQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQD 422
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF--KEMENKGVRPDSITFLSVLTV- 467
+ RVF E + +W A+IS A++ + + F ME K P+ TF SVL
Sbjct: 423 ASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAIMEYK---PNEYTFGSVLNAI 479
Query: 468 -CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ------- 519
G + + G+ ++K + P ++DM + G ++E++ + +
Sbjct: 480 SAGEDISLKHGQRCHSHLIK-VGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQF 538
Query: 520 -----IPG----------------------GPGLSVLQSLLGACRIHGNVEMGERIADAL 552
I G P + S+L AC + V+MG + + +
Sbjct: 539 AWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMM 598
Query: 553 MK---MEPAGSGSYVLMSNLYAEKGDWE 577
+K +EP G Y M ++ G E
Sbjct: 599 IKDHMIEPEGE-HYSCMVDMLGRAGRLE 625
>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
Length = 760
Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/649 (68%), Positives = 527/649 (81%), Gaps = 26/649 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
MNMYCK+G FD+AL +F NLNNPDIVSWNTVLSGF++SDDAL+FALRMN GV FDAVT
Sbjct: 120 MNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSDDALNFALRMNFTGVAFDAVTC 179
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+T L+FC DHEGF+FG QLHS I+K GLD EV+VGNALITMYSR RLVEARR
Sbjct: 180 TTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARR------- 232
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
G+ G+EAIL +EM+++G++LDHVSFT A SACGH K ELG+Q
Sbjct: 233 ----------------GNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQ 276
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAV 240
IH +++K+GY THV V NVL+STYSKCE DA VF + DRNV+SWTTMIS++ EDA
Sbjct: 277 IHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEEDAT 336
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
SLF EMR DGV PNDVTF+GLIHAI++ NLV+EG+MIHG+C+KT+FLSE +V N LITMY
Sbjct: 337 SLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMY 396
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
A+FESM DS KVF+EL+ REIISWN+LISGYAQNGL A+Q F + ES+PN +TFGS
Sbjct: 397 AKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMESRPNEFTFGS 456
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
VL+++ +AE IS++HGQRCHSHI+K+GL+++PIV SALLDMY KRGSI ES VF+ET
Sbjct: 457 VLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPL 516
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
K+E AWTAIISA ARHGDYE+VMN FK+ME +GV+PDSITFL+V+T CGR GM+ G L
Sbjct: 517 KNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQL 576
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
F+SM+KD+ IEPSP+HYS MVDMLGR GRL+EAEE VGQIPGG GLSVLQSLLGACRIHG
Sbjct: 577 FNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHG 636
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
NV+M +R+AD L++MEP GSGSYVLMSNLYAEKG+WE VA +RKGM+ +GVRKE+GFSW
Sbjct: 637 NVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWV 696
Query: 601 DVGDIDG---LHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAI 646
DVGD DG LHGFSS D HP+SEEIYRMAE LG EMK+L +R+R I
Sbjct: 697 DVGDADGSLYLHGFSSDDKFHPQSEEIYRMAETLGLEMKFLEKERKRKI 745
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 149/559 (26%), Positives = 251/559 (44%), Gaps = 73/559 (13%)
Query: 40 DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALI 99
D L+ +G + D VT + L C G Q+H+ + G S V V N+L+
Sbjct: 64 DLFKKQLQWGFVGNI-DQVTVAIVLKACCGDSKL--GCQIHAFAISSGFISHVTVPNSLM 120
Query: 100 TMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH 159
MY + G A VF+ + N D VSWN +LSG+ + D A+ + M G+ D
Sbjct: 121 NMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSDD----ALNFALRMNFTGVAFDA 176
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR 219
V+ T+ + C + G Q+H +K G V VGN L++ YS+C +A +
Sbjct: 177 VTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARR---- 232
Query: 220 MHDRNVISWTTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
+ +A+ +F EM +G+ + V+F G I A G + GR IH
Sbjct: 233 -------------GNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHS 279
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
L +K + + VCN LI+ Y++ E ++D++ VF+ + R ++SW +IS ++ SL
Sbjct: 280 LAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEEDATSLF 339
Query: 340 AVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
GV PN TF +++A+ + + GQ H +K S+ V ++L+
Sbjct: 340 NEMRRDGVY----PNDVTFVGLIHAITMKNLV--EEGQMIHGVCVKTSFLSELNVSNSLI 393
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE--MENKGVRPD 457
MY K S+ +S +VF E + +W ++IS A++G ++ + F ME+ RP+
Sbjct: 394 TMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMES---RPN 450
Query: 458 SITFLSVLTVCGRNGMI--HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
TF SVL+ I G+ +LK + +P S ++DM + G + E+
Sbjct: 451 EFTFGSVLSSIASAEAISMRHGQRCHSHILK-LGLNTNPIVSSALLDMYAKRGSICESLG 509
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
+ + P +K E A + + + +A GD
Sbjct: 510 VFSETP-------------------------------LKNEVA----WTAIISAHARHGD 534
Query: 576 WEMVAILRKGMKSKGVRKE 594
+E V L K M+ +GV+ +
Sbjct: 535 YEAVMNLFKDMEREGVKPD 553
>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Glycine max]
Length = 895
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/647 (66%), Positives = 523/647 (80%), Gaps = 3/647 (0%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
M MYCKSG F KAL +F NL++PDIVSWNTVLSGFE+S DAL+FA M+ G+ FD VTY
Sbjct: 119 MKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGFEESVDALNFARSMHYCGIAFDPVTY 178
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
++AL+FC GFLFG QLHSL+VK GL EV++GNAL+TMYSRWG L EARRVFDEMP
Sbjct: 179 TSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPE 238
Query: 121 KDSVSWNAILSGYTQDGD-YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D VSWNA++SGY Q+G YG+EA+L + M+R G+ +DHVS T A SACGH KNLELG+
Sbjct: 239 RDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGR 298
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDA 239
QIHG++ K+GYGTHVSV NVLMSTYSKCEV DA VF + +RNV+SWTTMIS++ EDA
Sbjct: 299 QIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISIDEEDA 358
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
VSLF MR++GV PNDVTFIGLIHA++I NLV EG IHGLCIK+ FLSE +V N ITM
Sbjct: 359 VSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITM 418
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFG 359
YA+FE +Q+S K+F+EL+CRE +SWNALISGYAQNG A+ + +KE KPN YTFG
Sbjct: 419 YAKFECIQESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLSAVKEIKPNQYTFG 478
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
SVLNA+ AAEDISL HG+ CHSH++K+GL +DPIV ALLDMYGKRG I ESQRVFNET
Sbjct: 479 SVLNAIAAAEDISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETL 538
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
E+++FAWTAIISA ARHGD+ESVM+ + EME +G+ PDSITFLSVL C R GM+ G
Sbjct: 539 ERTQFAWTAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAGHR 598
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIH 539
+FDSM+K + IEP+ +HYS MVDMLGRVGRL+EAEEL+ QIPGGPGLSVLQSLLG+CR+H
Sbjct: 599 VFDSMVKKHSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCRLH 658
Query: 540 GNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSW 599
GN+EM E++ L++M+PA SG YVLM+NLYAEKG WE VA +R+GM+ +GV+KEVGFSW
Sbjct: 659 GNMEMAEKVVGRLIEMDPASSGPYVLMANLYAEKGKWEKVAEVRRGMRGRGVKKEVGFSW 718
Query: 600 ADVGDIDG--LHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
DV ++D LHGFSSGD +HP SE I ++AE LG +MK L RER
Sbjct: 719 VDVSNVDSLYLHGFSSGDKSHPESENICKIAEFLGLQMKILKENRER 765
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 157/565 (27%), Positives = 262/565 (46%), Gaps = 61/565 (10%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D VT + +L C G Q+H V G S V V N+L+ MY + G +A VF
Sbjct: 78 DEVTVALSLKACQGESKL--GCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVF 135
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ + + D VSWN +LSG+ + V+A+ M G+ D V++TSA + C +
Sbjct: 136 ENLSHPDIVSWNTVLSGFEES----VDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGF 191
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G Q+H + +K G G V +GN L++ YS+ + +A +VF M +R+++SW MIS
Sbjct: 192 LFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGY 251
Query: 236 RE-------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ +AV LF M G+ + V+ G + A ++ GR IHGL K + +
Sbjct: 252 AQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGT 311
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
SVCN L++ Y++ E +D++ VF+ +S R ++SW +IS ++ +SL GV
Sbjct: 312 HVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISIDEEDAVSLFNAMRVNGVY 371
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
PN TF +++AV ++ G H IK S+ V ++ + MY K I
Sbjct: 372 ----PNDVTFIGLIHAVTIRNLVT--EGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECI 425
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT-- 466
ES ++F E + +W A+IS A++G Y+ + + K ++P+ TF SVL
Sbjct: 426 QESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLSAV-KEIKPNQYTFGSVLNAI 484
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG---- 522
+ ++ G+ +LK + P ++DM G+ G + E++ + +
Sbjct: 485 AAAEDISLNHGKSCHSHLLK-LGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQF 543
Query: 523 ------------------------------GPGLSVLQSLLGACRIHGNVEMGERIADAL 552
P S+L AC G V+ G R+ D++
Sbjct: 544 AWTAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAGHRVFDSM 603
Query: 553 MK---MEPAGSGSYVLMSNLYAEKG 574
+K +EP S Y +M ++ G
Sbjct: 604 VKKHSIEPT-SEHYSIMVDMLGRVG 627
>gi|357514793|ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344437|ref|XP_003636296.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358345563|ref|XP_003636846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502231|gb|AES83434.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502781|gb|AES83984.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521707|gb|AET02161.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 791
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/645 (66%), Positives = 525/645 (81%), Gaps = 8/645 (1%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
M MYCK+G+F+ ALC+F L+ PDIVSWNT+LSGFEKS DAL+FA M+L GVVFD VTY
Sbjct: 126 MKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGFEKSVDALNFACFMHLNGVVFDPVTY 185
Query: 61 STALSFCLDHE-----GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+TALSFC D + GFLFGLQLHSL+VK G EV++GNAL+TMYSRWG L EA RVF
Sbjct: 186 TTALSFCWDRDYWDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVF 245
Query: 116 DEMPNKDSVSWNAILSGYTQDGD-YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
+EM +D VSWNA+LSGY Q+G+ YG+EA+L M+R+G+ LDHVS T A SACG+ KN
Sbjct: 246 NEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKN 305
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
LE GKQIHG++ K+GYGTHV+V NVL+STYSKC+V DA VF+ M RNV+SWTT+IS+
Sbjct: 306 LEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISI 365
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+ E+ VSLF MR+DGV PNDVTFIGL+HAI+I N+VKEG M+HGLC+K+ SE +V N
Sbjct: 366 DEENVVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSN 425
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPN 354
LITMYA+FES+Q+S+K+F+EL+ + ISWNALISGYAQNGL A F IKE KPN
Sbjct: 426 SLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIKEIKPN 485
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
YTFGSVLNA+ AAEDISLKHGQRCHSH+IK+GL++DP V ALLDMYGKRG+I ESQRV
Sbjct: 486 QYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRV 545
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
FNET EK++F+WT +ISA ARHGDYESVM+ +KE+E +G DSITFLSVL C R GM+
Sbjct: 546 FNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMV 605
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
G +FDSM+K + IEP+P+HYS MVDMLGRVGRL+EAEEL+ QIPGGPGLSVLQSLLG
Sbjct: 606 DVGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLG 665
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
+C++HGNVEM ER+ D+L++M+P SG YVLM+NLYAEKG+WE VA +RKGM+ +GV+KE
Sbjct: 666 SCKLHGNVEMAERVVDSLIQMDPGSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVKKE 725
Query: 595 VGFSWADVGDIDG--LHGFSSGDNTHPRSEEIYRMAECLGSEMKY 637
VGFSW DV ++D LHGFSSGD +HP SE I RMAE LG +M +
Sbjct: 726 VGFSWVDVANVDSLHLHGFSSGDKSHPESETIDRMAEFLGLQMIF 770
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 158/545 (28%), Positives = 261/545 (47%), Gaps = 30/545 (5%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F + P+ S N + F + ALS + + + ALSF
Sbjct: 40 LFEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFLQNIDEVTLALSFKACRGE 99
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
F+ G Q+H +V G S V V N+L+ MY + GR A VF+ + D VSWN ILSG
Sbjct: 100 FILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSG 159
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC-----GHEKNLELGKQIHGVSIK 187
+ + V+A+ M G+ D V++T+A S C + G Q+H + +K
Sbjct: 160 FEKS----VDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVVK 215
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-------DAV 240
G+G V +GN L++ YS+ +A +VF M R+++SW M+S + +AV
Sbjct: 216 CGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAV 275
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
LF M +G+ + V+ G I A ++ G+ IHGL K + + +VCN LI+ Y
Sbjct: 276 LLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTY 335
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
++ + ++D++ VF ++S R ++SW LIS +N +SL GV PN TF
Sbjct: 336 SKCKVLRDAKAVFQDMSARNVVSWTTLISIDEENVVSLFNAMRVDGVY----PNDVTFIG 391
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
+L+A+ + K G H +K L S+ V ++L+ MY K SI ES+++F E
Sbjct: 392 LLHAITIRNMV--KEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNY 449
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT--VCGRNGMIHKGR 478
+ +W A+IS A++G + F K ++P+ TF SVL + + G+
Sbjct: 450 QGTISWNALISGYAQNGLCKEAFLTFLS-AIKEIKPNQYTFGSVLNAIAAAEDISLKHGQ 508
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRI 538
++K + P ++DM G+ G + E++ + + P S ++ A
Sbjct: 509 RCHSHLIK-LGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFS-WTGMISAYAR 566
Query: 539 HGNVE 543
HG+ E
Sbjct: 567 HGDYE 571
>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
Length = 686
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/638 (60%), Positives = 494/638 (77%), Gaps = 3/638 (0%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
M MY K+G+FD AL IF NL +PD+VSWNT+LSGF+ + AL+F +RM GVVFDA TY
Sbjct: 43 MGMYRKAGRFDNALYIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTY 102
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
STALSFC+ EGF GLQL S +VK GL+S++ VGN+ ITMYSR G ARRVFDEMP
Sbjct: 103 STALSFCVGSEGFRLGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPF 162
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
KD +SWN++LSG +Q+G +G EA+L +MMR+G+ LDHVSFTS + C HE +L+L +Q
Sbjct: 163 KDMISWNSLLSGLSQEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQ 222
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAV 240
IHG+ IK GY + + VGN+LMS YSKC V VF +M +RNV+SWTTMIS NR+DAV
Sbjct: 223 IHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMISSNRDDAV 282
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
S+F MRLDGV PN+VTF+GL++A+ +KEG IHGLCIKT F+SEPSV N ITMY
Sbjct: 283 SIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMY 342
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
A+FE+++D++K FD+++ REIISWNA+ISG+AQNG S A++ F E+ PN YTFGS
Sbjct: 343 AKFEALEDAKKAFDDITFREIISWNAMISGFAQNGFSHEALKMFLSATAETMPNEYTFGS 402
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
VLNA+ AEDIS+KHGQRCH+H++K+GL+S P+V SALLDMY KRG+I ES++VFNE +
Sbjct: 403 VLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQ 462
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+++F WT+IISA + HGD+ SVMN F EM + V PD +TFLSVLT C R GM+ KG +
Sbjct: 463 RNQFVWTSIISAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHEI 522
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
+ M++DY++EPS +HYSCMVDMLGR GRL+EAEEL+ ++PGGPG S+LQS+LG+CR+HG
Sbjct: 523 LNMMIEDYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHG 582
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
NV+MG ++A+ M+M+P SGSYV M N+YAEK W+ A +RK M+ K V KE GFSW
Sbjct: 583 NVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEQWDKAAEIRKAMRKKNVSKEAGFSWI 642
Query: 601 DVGDIDG---LHGFSSGDNTHPRSEEIYRMAECLGSEM 635
DVGD +G + GFSSGD +HP+S+EIYRM E +G EM
Sbjct: 643 DVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIVGLEM 680
>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
Length = 688
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/638 (59%), Positives = 495/638 (77%), Gaps = 3/638 (0%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
M MY K+G+FD ALCIF NL +PD+VSWNT+LSGF+ + AL+F +RM GVVFDA TY
Sbjct: 43 MGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTY 102
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
STALSFC+ EGFL GLQL S +VK GL+S++ VGN+ ITMYSR G ARRVFDEM
Sbjct: 103 STALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSF 162
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
KD +SWN++LSG +Q+G +G EA++ +MMR+G+ LDHVSFTS + C HE +L+L +Q
Sbjct: 163 KDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQ 222
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAV 240
IHG+ IK GY + + VGN+LMS YSKC V VF +M +RNV+SWTTMIS N++DAV
Sbjct: 223 IHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAV 282
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
S+F MR DGV PN+VTF+GLI+A+ +KEG IHGLCIKT F+SEPSV N IT+Y
Sbjct: 283 SIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLY 342
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
A+FE+++D++K F++++ REIISWNA+ISG+AQNG S A++ F E+ PN YTFGS
Sbjct: 343 AKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGS 402
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
VLNA+ AEDIS+K GQRCH+H++K+GL+S P+V SALLDMY KRG+I ES++VFNE +
Sbjct: 403 VLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ 462
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
K++F WT+IISA + HGD+E+VMN F +M + V PD +TFLSVLT C R GM+ KG +
Sbjct: 463 KNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEI 522
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
F+ M++ Y++EPS +HYSCMVDMLGR GRL+EAEEL+ ++PGGPG S+LQS+LG+CR+HG
Sbjct: 523 FNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHG 582
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
NV+MG ++A+ M+M+P SGSYV M N+YAEK +W+ A +RK M+ K V KE GFSW
Sbjct: 583 NVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWI 642
Query: 601 DVGDIDG---LHGFSSGDNTHPRSEEIYRMAECLGSEM 635
DVGD +G + GFSSGD +HP+S+EIYRM E +G EM
Sbjct: 643 DVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEM 680
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 154/543 (28%), Positives = 261/543 (48%), Gaps = 33/543 (6%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D VT AL C G Q+H G S V V NA++ MY + GR A +F
Sbjct: 2 DEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 59
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ + + D VSWN ILSG+ D A+ ++ M G+ D ++++A S C +
Sbjct: 60 ENLVDPDVVSWNTILSGF----DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGF 115
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-M 234
LG Q+ +K G + + VGN ++ YS+ A +VF M +++ISW +++S +
Sbjct: 116 LLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGL 175
Query: 235 NRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++E +AV +F++M +GV + V+F +I +K R IHGLCIK + S
Sbjct: 176 SQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESL 235
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V N L++ Y++ ++ + VF ++S R ++SW +IS + +S+ F GV
Sbjct: 236 LEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVY- 294
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
PN TF ++NAV E I K G + H IK G S+P VG++ + +Y K ++
Sbjct: 295 ---PNEVTFVGLINAVKCNEQI--KEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALE 349
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC- 468
++++ F + + +W A+IS A++G + F + + P+ TF SVL
Sbjct: 350 DAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIA 408
Query: 469 -GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
+ + +G+ +LK + P S ++DM + G ++E+E++ ++
Sbjct: 409 FAEDISVKQGQRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQF- 466
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V S++ A HG+ E + ++K E +S L A RKGM
Sbjct: 467 VWTSIISAYSSHGDFETVMNLFHKMIK-ENVAPDLVTFLSVL---------TACNRKGMV 516
Query: 588 SKG 590
KG
Sbjct: 517 DKG 519
>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32430, mitochondrial; Flags: Precursor
gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/638 (59%), Positives = 495/638 (77%), Gaps = 3/638 (0%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
M MY K+G+FD ALCIF NL +PD+VSWNT+LSGF+ + AL+F +RM GVVFDA TY
Sbjct: 118 MGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTY 177
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
STALSFC+ EGFL GLQL S +VK GL+S++ VGN+ ITMYSR G ARRVFDEM
Sbjct: 178 STALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSF 237
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
KD +SWN++LSG +Q+G +G EA++ +MMR+G+ LDHVSFTS + C HE +L+L +Q
Sbjct: 238 KDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQ 297
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAV 240
IHG+ IK GY + + VGN+LMS YSKC V VF +M +RNV+SWTTMIS N++DAV
Sbjct: 298 IHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAV 357
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
S+F MR DGV PN+VTF+GLI+A+ +KEG IHGLCIKT F+SEPSV N IT+Y
Sbjct: 358 SIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLY 417
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
A+FE+++D++K F++++ REIISWNA+ISG+AQNG S A++ F E+ PN YTFGS
Sbjct: 418 AKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGS 477
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
VLNA+ AEDIS+K GQRCH+H++K+GL+S P+V SALLDMY KRG+I ES++VFNE +
Sbjct: 478 VLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ 537
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
K++F WT+IISA + HGD+E+VMN F +M + V PD +TFLSVLT C R GM+ KG +
Sbjct: 538 KNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEI 597
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
F+ M++ Y++EPS +HYSCMVDMLGR GRL+EAEEL+ ++PGGPG S+LQS+LG+CR+HG
Sbjct: 598 FNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHG 657
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
NV+MG ++A+ M+M+P SGSYV M N+YAEK +W+ A +RK M+ K V KE GFSW
Sbjct: 658 NVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWI 717
Query: 601 DVGDIDG---LHGFSSGDNTHPRSEEIYRMAECLGSEM 635
DVGD +G + GFSSGD +HP+S+EIYRM E +G EM
Sbjct: 718 DVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEM 755
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 156/553 (28%), Positives = 265/553 (47%), Gaps = 33/553 (5%)
Query: 46 LRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW 105
L++ G D VT AL C G Q+H G S V V NA++ MY +
Sbjct: 67 LQLGYFGRHMDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKA 124
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
GR A +F+ + + D VSWN ILSG+ D A+ ++ M G+ D ++++A
Sbjct: 125 GRFDNALCIFENLVDPDVVSWNTILSGF----DDNQIALNFVVRMKSAGVVFDAFTYSTA 180
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
S C + LG Q+ +K G + + VGN ++ YS+ A +VF M +++
Sbjct: 181 LSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDM 240
Query: 226 ISWTTMIS-MNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
ISW +++S +++E +AV +F++M +GV + V+F +I +K R IHG
Sbjct: 241 ISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHG 300
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
LCIK + S V N L++ Y++ ++ + VF ++S R ++SW +IS + +S+
Sbjct: 301 LCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIF 360
Query: 340 AVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F GV PN TF ++NAV E I K G + H IK G S+P VG++ +
Sbjct: 361 LNMRFDGVY----PNEVTFVGLINAVKCNEQI--KEGLKIHGLCIKTGFVSEPSVGNSFI 414
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
+Y K ++ ++++ F + + +W A+IS A++G + F + + P+
Sbjct: 415 TLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEY 473
Query: 460 TFLSVLTVC--GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
TF SVL + + +G+ +LK + P S ++DM + G ++E+E++
Sbjct: 474 TFGSVLNAIAFAEDISVKQGQRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIDESEKVF 532
Query: 518 GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
++ V S++ A HG+ E + ++K E +S L
Sbjct: 533 NEMSQKNQF-VWTSIISAYSSHGDFETVMNLFHKMIK-ENVAPDLVTFLSVL-------- 582
Query: 578 MVAILRKGMKSKG 590
A RKGM KG
Sbjct: 583 -TACNRKGMVDKG 594
>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
Length = 726
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 321/642 (50%), Positives = 428/642 (66%), Gaps = 6/642 (0%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVF-DAVTYST 62
Y K+G F A+ +F D+ S+NT+LS F +AL FA M G V DAVT +
Sbjct: 77 YAKTGSFPSAVGVFAAARARDVSSYNTILSAFPDPAEALDFASWMLRSGAVRPDAVTCTV 136
Query: 63 ALSFCLDH-EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
ALS EGFL QLH+L + GL ++V+VGNAL+T YSR G L EAR VFD+MP +
Sbjct: 137 ALSLAAGRGEGFLV-RQLHALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVFDDMPAR 195
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQ 180
D VSWNA++ G QDGD E I + M+R G ++ D +S S ACG E LELG+Q
Sbjct: 196 DLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQ 255
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAV 240
+HG ++K+G +VS+GNVL++ Y KC G A ++F M +R+V+SWTT ISM+ EDA+
Sbjct: 256 VHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAISMDGEDAL 315
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
+LF MR DGV PN+VTF+ L+ A+ + +M+H C+K E + N LITMY
Sbjct: 316 TLFNGMRRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMY 375
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
A+ M D+ VFD + REII+WNA+ISGYAQNG A++ F + + PN TF S
Sbjct: 376 AKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSMARCLTPNETTFAS 435
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
VL+AV A E +S+ +GQ HS + +G V AL+DMY KRG++ ES++ F+ET++
Sbjct: 436 VLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQ 495
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+S AWTAIISA ARHG Y +VM+ F +M GV PD + L+VLT C GM+ GR +
Sbjct: 496 RSLIAWTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDI 555
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
FDSM D +E P+HYSC+VDMLGR GRL EAEEL+ ++P GP +S LQSLLGACRIHG
Sbjct: 556 FDSMAADRGVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIHG 615
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
+ E+GERIA L + EP SG+YVL+SN+YA+ GDW+ VA +R+ M+ +GV+KE+GFSW
Sbjct: 616 DAEIGERIARILTEKEPTESGAYVLLSNIYADVGDWDGVAKVRRKMRDRGVKKEIGFSWV 675
Query: 601 DVGDIDG--LHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNS 640
D G + LH FSS D THPR+EEIY +A+ LG EMK+L +
Sbjct: 676 DAGAGEALHLHKFSSDDTTHPRTEEIYAVADVLGWEMKFLKN 717
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 156/320 (48%), Gaps = 14/320 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYST 62
MY K G A +F+ ++ D+VSW T +S +DAL+ M GV + VT+
Sbjct: 278 MYYKCGAPGSARRLFDAMSERDVVSWTTAIS--MDGEDALTLFNGMRRDGVPPNEVTF-V 334
Query: 63 ALSFCLDHEGFLFGLQL-HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
AL L + G Q+ H+ +K + E N+LITMY++ R+ +AR VFD MP +
Sbjct: 335 ALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRR 394
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL--GK 179
+ ++WNA++SGY Q+G L L M + L + +F S SA + + + G+
Sbjct: 395 EIIAWNAVISGYAQNGR--CNDALELFSSMARCLTPNETTFASVLSAVTAVETVSMAYGQ 452
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDA 239
H ++ MG+G V L+ Y+K ++ K F R++I+WT +IS N
Sbjct: 453 MYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHG 512
Query: 240 -----VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR-MIHGLCIKTNFLSEPSVC 293
+SLF +M GV P+ V + ++ A G +V GR + + P
Sbjct: 513 SYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAADRGVELWPEHY 572
Query: 294 NCLITMYARFESMQDSEKVF 313
+C++ M R + ++E++
Sbjct: 573 SCVVDMLGRAGRLAEAEELM 592
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY K+ + D A +F+ + +I++WN V+SG+ ++ +DAL M + +
Sbjct: 372 ITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSMARC-LTPNE 430
Query: 58 VTYSTALSFCLDHE--GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T+++ LS E +G HS + G YV ALI MY++ G L E+R+ F
Sbjct: 431 TTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAF 490
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKN 174
E + ++W AI+S + G YG A+++L +M R G+ D V + +AC +
Sbjct: 491 HETEQRSLIAWTAIISANARHGSYG--AVMSLFGDMARSGVAPDGVVLLAVLTACRYGGM 548
Query: 175 LELGKQI 181
++ G+ I
Sbjct: 549 VDAGRDI 555
>gi|242051244|ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
gi|241926743|gb|EER99887.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
Length = 745
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 320/642 (49%), Positives = 431/642 (67%), Gaps = 5/642 (0%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIG-VVFDAVTYST 62
Y K F A +F + D S+NT+LS DDAL+FA RM G V DAVT++
Sbjct: 94 YAKGNSFPAAARVFAAARSRDTRSYNTILSATPDPDDALAFAARMLRTGDVRPDAVTFTV 153
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
LS QLH+L + G+ ++V+VGNAL+T YSR G + AR+VF+EMP +D
Sbjct: 154 TLSLAAGRGEAHLVRQLHALASRAGIATDVFVGNALVTAYSRGGLMDAARKVFEEMPARD 213
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQI 181
VSWNA++ G QDG+ E I + M+++G +R D +S S ACG E LELG+QI
Sbjct: 214 LVSWNALVCGLAQDGECSAEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQI 273
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS 241
HG ++K+G HVS+ NVL++ Y KC G A ++F M +R+VISWTT++SM+ EDAVS
Sbjct: 274 HGFAVKLGVEGHVSIANVLVAMYYKCGTPGCARRLFEFMGERDVISWTTVMSMDGEDAVS 333
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
LF MR DGV PN+VTF+ ++ ++ +EG+MIH +C+KT+ + + N LITMYA
Sbjct: 334 LFNGMRRDGVAPNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAANSLITMYA 393
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSV 361
+ M D+ +F + EII+WNALISGYAQN + A++AF ++K KPN TF S+
Sbjct: 394 KLRRMDDARMIFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAMMKIMKPNETTFASI 453
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L+AV A E +S+ +GQ H +K+GL + V AL+DMY KRGS+ ES + F ET +
Sbjct: 454 LSAVTAVETVSMAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSLEESWKAFGETVHR 513
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
S AWTAIISA ++HG+Y++V++ F +M GV PD + LSVLT C +G + GR +F
Sbjct: 514 SLIAWTAIISANSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSGFVSLGREIF 573
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
DSM + E P+HY+C+VDMLGR GRLEEAEEL+ Q+P GP +S LQSLLGACRIHGN
Sbjct: 574 DSMAAKHGAELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSVSALQSLLGACRIHGN 633
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
++GER+A L + EP SG+YVL+SN+YAEKGDW VA +R+ M+ +GV+KEVGFSW D
Sbjct: 634 TDVGERVASVLTETEPTESGAYVLLSNIYAEKGDWGAVARVRRQMRERGVKKEVGFSWVD 693
Query: 602 VGDI-DGLH--GFSSGDNTHPRSEEIYRMAECLGSEMKYLNS 640
G D LH FSS D THP+SEEIYR+AE LG EMK+L +
Sbjct: 694 AGGAGDSLHLYKFSSDDTTHPQSEEIYRVAEGLGWEMKFLKN 735
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 139/541 (25%), Positives = 239/541 (44%), Gaps = 68/541 (12%)
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
TA S + G H+L V GL + V N+L Y++ A RVF ++
Sbjct: 54 TAFSAAVARSGPDALPAFHALAVASGLAAFAPVTNSLAARYAKGNSFPAAARVFAAARSR 113
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQ 180
D+ S+N ILS T D D +A+ M+R G +R D V+FT S L +Q
Sbjct: 114 DTRSYNTILSA-TPDPD---DALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQ 169
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDA- 239
+H ++ + G T V VGN L++ YS+ + A KVF M R+++SW ++ +D
Sbjct: 170 LHALASRAGIATDVFVGNALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGE 229
Query: 240 -----VSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ +F M G V P+ ++ +I A ++ GR IHG +K S+
Sbjct: 230 CSAEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIA 289
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N L+ MY + + + ++F+ + R++ISW ++S ++ +SL F G+ ++
Sbjct: 290 NVLVAMYYKCGTPGCARRLFEFMGERDVISWTTVMSMDGEDAVSL-----FNGMRRDGVA 344
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN TF ++L+++ D + GQ H+ +K L ++L+ MY K + +++
Sbjct: 345 PNEVTFVAMLSSMPG--DCPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDAR 402
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL------- 465
+F+ AW A+IS A++ + + F M K ++P+ TF S+L
Sbjct: 403 MIFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAM-MKIMKPNETTFASILSAVTAVE 461
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG--- 522
TV G ++ + L + ++ ++DM + G LEE+ + G+
Sbjct: 462 TVSMAYGQMYHCQALKLGLGASEYVS------GALIDMYAKRGSLEESWKAFGETVHRSL 515
Query: 523 -------------------------------GPGLSVLQSLLGACRIHGNVEMGERIADA 551
P VL S+L ACR G V +G I D+
Sbjct: 516 IAWTAIISANSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSGFVSLGREIFDS 575
Query: 552 L 552
+
Sbjct: 576 M 576
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 175/361 (48%), Gaps = 40/361 (11%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYST 62
MY K G A +F + D++SW TV+S +DA+S M GV + VT+
Sbjct: 295 MYYKCGTPGCARRLFEFMGERDVISWTTVMS--MDGEDAVSLFNGMRRDGVAPNEVTFVA 352
Query: 63 ALSF----CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
LS C EG + +H++ +K L + N+LITMY++ R+ +AR +F M
Sbjct: 353 MLSSMPGDCPAREGQM----IHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFSLM 408
Query: 119 PNKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
P+ + ++WNA++SGY Q+ +EA LA++++M+ + +F S SA + +
Sbjct: 409 PHSEIIAWNALISGYAQNEMCQDALEAFLAMMKIMKP----NETTFASILSAVTAVETVS 464
Query: 177 L--GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
+ G+ H ++K+G G V L+ Y+K ++ K F R++I+WT +IS
Sbjct: 465 MAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSLEESWKAFGETVHRSLIAWTAIISA 524
Query: 235 NRE----DA-VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI-HGLCIKTNFLS 288
N + DA VSLF +M GV P+ V + ++ A V GR I + K
Sbjct: 525 NSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSGFVSLGREIFDSMAAKHGAEL 584
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
P C++ M R ++++E++ ++ +G S++A+Q+ G
Sbjct: 585 WPEHYACVVDMLGRAGRLEEAEELMLQMP----------------SGPSVSALQSLLGAC 628
Query: 349 K 349
+
Sbjct: 629 R 629
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 103/187 (55%), Gaps = 9/187 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY K + D A IF+ + + +I++WN ++SG+ +++ DAL L M I + +
Sbjct: 389 ITMYAKLRRMDDARMIFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAMMKI-MKPNE 447
Query: 58 VTYSTALSFCLDHE--GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T+++ LS E +G H +K GL + YV ALI MY++ G L E+ + F
Sbjct: 448 TTFASILSAVTAVETVSMAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSLEESWKAF 507
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKN 174
E ++ ++W AI+S ++ G+Y +A+++L +M+ G+ D V S +AC +
Sbjct: 508 GETVHRSLIAWTAIISANSKHGNY--DAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSGF 565
Query: 175 LELGKQI 181
+ LG++I
Sbjct: 566 VSLGREI 572
>gi|357116106|ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Brachypodium distachyon]
Length = 739
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 323/648 (49%), Positives = 429/648 (66%), Gaps = 11/648 (1%)
Query: 4 YCKSGQ-FDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIG-VVFDAVTYS 61
Y KS F A +F+ D+ S+NT+LS +AL+FA M G V DAVT +
Sbjct: 82 YAKSASSFPSAAKVFHTARARDVSSYNTILSALPDRGEALAFAAWMLRSGDVRPDAVTLT 141
Query: 62 TALSFCL---DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
ALS + +G QLH+L + GL ++V+VGNAL+T YSR L ARRVFDEM
Sbjct: 142 VALSLAASRGEADGVWIVRQLHALASRSGLVADVFVGNALVTAYSRGALLGAARRVFDEM 201
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG---LRLDHVSFTSAASACGHEKNL 175
P +D VSWNA++ G QDGD E IL + +++ G +R D +S S ACG E +
Sbjct: 202 PARDLVSWNAMICGLAQDGDCPTEVILVFLRLLKDGGAAVRPDRISVCSVIPACGSEGKI 261
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
ELG+Q+H ++K+G VS+GNVL++ Y K G A K+ + M +R+VISWTT ISM+
Sbjct: 262 ELGRQVHSFTVKLGVEGKVSIGNVLVAMYYKSGAAGCARKLLKSMDERDVISWTTAISMD 321
Query: 236 -REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
EDA+ LF MR DGV PN+VTF+ L+ A++ G + G+MIH +C+KT E + N
Sbjct: 322 GEEDAIELFNGMRQDGVPPNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAAAN 381
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPN 354
LITMYA+ M D+ VFD + EII+WNALISGYAQN L A+Q F +++ +PN
Sbjct: 382 SLITMYAKLRRMDDARTVFDRMPRPEIIAWNALISGYAQNELCNEALQVFSCMVRCLRPN 441
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
TF SVL+AV A E +S+ +G+ H +K+GL V AL+DMY KRGS+ ES++
Sbjct: 442 ETTFASVLSAVTAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKA 501
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F+ T +S AWTAIISA A+HG+Y++VMN F +M GV PD + LSVLT C +G +
Sbjct: 502 FDVTVHRSLIAWTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAV 561
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+ GR +FDSM ++H+EP P+HY+C++DMLGR GRLEEAEEL+ Q+P GP +S LQSLLG
Sbjct: 562 NTGREIFDSMPAEHHVEPWPEHYACVIDMLGRAGRLEEAEELMLQMPTGPSVSALQSLLG 621
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
ACRIHGN + ER+A L + EP SG+YVL+SN+YAEKGDW VA +R+ M+ KGVRKE
Sbjct: 622 ACRIHGNTSIAERVAGILTETEPTESGAYVLLSNIYAEKGDWGGVAKVRREMREKGVRKE 681
Query: 595 VGFSWADVGDIDG--LHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNS 640
+GFSW D G + LH FSS D THP +EEIYR+AE LG E K L +
Sbjct: 682 IGFSWVDFGAGESLHLHKFSSDDTTHPCTEEIYRVAEGLGLETKLLKN 729
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 196/403 (48%), Gaps = 26/403 (6%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWG-RLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
LH L + GLD+ +V N+L Y++ A +VF +D S+N ILS G
Sbjct: 59 LHGLAIASGLDAFSFVTNSLAARYAKSASSFPSAAKVFHTARARDVSSYNTILSALPDRG 118
Query: 138 DYGVEAILALIEMMRKG-LRLDHVSFTSA---ASACGHEKNLELGKQIHGVSIKMGYGTH 193
EA+ M+R G +R D V+ T A A++ G + + +Q+H ++ + G
Sbjct: 119 ----EALAFAAWMLRSGDVRPDAVTLTVALSLAASRGEADGVWIVRQLHALASRSGLVAD 174
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED------AVSLFKEMR 247
V VGN L++ YS+ + G A +VF M R+++SW MI +D + +F +
Sbjct: 175 VFVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQDGDCPTEVILVFLRLL 234
Query: 248 LDG---VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
DG V P+ ++ +I A ++ GR +H +K + S+ N L+ MY +
Sbjct: 235 KDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMYYKSG 294
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLN 363
+ + K+ + R++ISW IS + A++ F G+ ++ PN TF ++++
Sbjct: 295 AAGCARKLLKSMDERDVISWTTAISMDGEED----AIELFNGMRQDGVPPNEVTFVALMS 350
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
A+ A ++GQ H+ +K G+ + ++L+ MY K + +++ VF+
Sbjct: 351 ALAAG--CPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPEI 408
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
AW A+IS A++ + F M + +RP+ TF SVL+
Sbjct: 409 IAWNALISGYAQNELCNEALQVFSCMV-RCLRPNETTFASVLS 450
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 175/360 (48%), Gaps = 11/360 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYST 62
MY KSG A + +++ D++SW T +S + +DA+ M GV + VT+
Sbjct: 289 MYYKSGAAGCARKLLKSMDERDVISWTTAIS-MDGEEDAIELFNGMRQDGVPPNEVTFVA 347
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
+S +G +H++ +K G+ E N+LITMY++ R+ +AR VFD MP +
Sbjct: 348 LMSALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPE 407
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL--GKQ 180
++WNA++SGY Q+ + EA L + M + LR + +F S SA + + + G+
Sbjct: 408 IIAWNALISGYAQN-ELCNEA-LQVFSCMVRCLRPNETTFASVLSAVTAVETVSMAYGEM 465
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----N 235
H S+K+G V L+ Y+K ++ K F R++I+WT +IS N
Sbjct: 466 YHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHRSLIAWTAIISAHAKHGN 525
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI-HGLCIKTNFLSEPSVCN 294
+ ++LF +M GV P+ V + ++ A V GR I + + + P
Sbjct: 526 YDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREIFDSMPAEHHVEPWPEHYA 585
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPN 354
C+I M R ++++E++ ++ +S + G + + + + G++ E++P
Sbjct: 586 CVIDMLGRAGRLEEAEELMLQMPTGPSVSALQSLLGACRIHGNTSIAERVAGILTETEPT 645
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 21/193 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSF------ALRMN-- 49
+ MY K + D A +F+ + P+I++WN ++SG+ E ++AL LR N
Sbjct: 384 ITMYAKLRRMDDARTVFDRMPRPEIIAWNALISGYAQNELCNEALQVFSCMVRCLRPNET 443
Query: 50 LIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
V AVT +S +G H +K GL YV ALI MY++ G L
Sbjct: 444 TFASVLSAVTAVETVSMA-------YGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLE 496
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASA 168
E+R+ FD ++ ++W AI+S + + G+Y + ++ L +M+ G+ D V S +A
Sbjct: 497 ESRKAFDVTVHRSLIAWTAIISAHAKHGNY--DTVMNLFDDMVCSGVAPDGVVLLSVLTA 554
Query: 169 CGHEKNLELGKQI 181
C H + G++I
Sbjct: 555 CRHSGAVNTGREI 567
>gi|414888053|tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 754
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 310/623 (49%), Positives = 424/623 (68%), Gaps = 7/623 (1%)
Query: 24 DIVSWNTVLSGFEKSDDALSFALRMNLIG-VVFDAVTYSTALSFCLDH-EGFLFGLQLHS 81
D S+NT+LS DDAL+FA RM G V DA+T++ LS EG L QLH+
Sbjct: 123 DTSSYNTILSATPDPDDALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLV-RQLHA 181
Query: 82 LIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGV 141
L+ + G+ ++V+VGNAL+T Y+R L AR+VF+EMP +D VSWNA++ G QDG+
Sbjct: 182 LVSRAGIAADVFVGNALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQDGECPA 241
Query: 142 EAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
E I + M++ G +R D +S S SACG E LELG+QIHG ++K+G HVS+ NVL
Sbjct: 242 EVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVSIANVL 301
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEMRLDGVCPNDVTFIG 260
++ Y KC G A ++F M +R+V+SWTT++SM+REDAVSLF M DGV PN+VTF+
Sbjct: 302 VAMYYKCGTPGCARRLFEFMGERDVVSWTTVMSMDREDAVSLFNGMMRDGVAPNEVTFVA 361
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
++ A+ +EG+M+H +CIKT +P+ N ITMYA+ M D++ +F + E
Sbjct: 362 ILSAMPGHCPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMIFGLMPHPE 421
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
+I+WNALISGYAQN + A++AF ++K +KP+ TF S+L+AV A E +S+ +GQ H
Sbjct: 422 VIAWNALISGYAQNEMCQDALEAFLSMVKITKPSETTFASILSAVTAVETVSMAYGQMYH 481
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
+K+GL + V AL+D+Y KRGS+ ES + F ET +S AWTAIISA ++HG+Y+
Sbjct: 482 CQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAFGETVHRSLIAWTAIISANSKHGNYD 541
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCM 500
V++ F +M GV PD + LSVLT C +G GR +F+SM + E P+HY+C+
Sbjct: 542 GVVSLFNDMARSGVTPDGVVLLSVLTACRYSGFASLGREIFESMATKHGAELWPEHYACV 601
Query: 501 VDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGS 560
VDMLGR GRLEEAEEL+ Q+P GP +S +QSLLGACRIHGN ++GER+A L++ EP S
Sbjct: 602 VDMLGRAGRLEEAEELMLQMPSGPSVSAMQSLLGACRIHGNTDVGERVAGVLLETEPTES 661
Query: 561 GSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG---DIDGLHGFSSGDNT 617
G+YVL+SN+YAEKGDW VA +R+ M+ GV+KEVGFSW D G D LH FSS D T
Sbjct: 662 GAYVLLSNIYAEKGDWGAVARVRRKMRGMGVKKEVGFSWVDAGGANDSLHLHKFSSDDTT 721
Query: 618 HPRSEEIYRMAECLGSEMKYLNS 640
HP+ EEIYR+AE LG EMK+ +
Sbjct: 722 HPQREEIYRVAEGLGWEMKFFKN 744
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 220/474 (46%), Gaps = 34/474 (7%)
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
TA S + G LH+L V GL + V N+L Y++ A RVF P++
Sbjct: 63 TAFSAAVARSGPDALPALHALAVISGLAAFAPVTNSLAARYAKGNSFAAAARVFAAAPSR 122
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQ 180
D+ S+N ILS T D D +A+ M+R G +R D ++FT S L +Q
Sbjct: 123 DTSSYNTILSA-TPDPD---DALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLVRQ 178
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDA- 239
+H + + G V VGN L++ Y++ A KVF M R+++SW ++ +D
Sbjct: 179 LHALVSRAGIAADVFVGNALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQDGE 238
Query: 240 -----VSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ +F M + GV P+ ++ +I A ++ GR IHG +K S+
Sbjct: 239 CPAEVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVSIA 298
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N L+ MY + + + ++F+ + R+++SW ++S ++ +SL F G++++
Sbjct: 299 NVLVAMYYKCGTPGCARRLFEFMGERDVVSWTTVMSMDREDAVSL-----FNGMMRDGVA 353
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN TF ++L+A+ + GQ H+ IK GL P ++ + MY K + +++
Sbjct: 354 PNEVTFVAILSAMPG--HCPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAK 411
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL------- 465
+F AW A+IS A++ + + F M K +P TF S+L
Sbjct: 412 MIFGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSMV-KITKPSETTFASILSAVTAVE 470
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
TV G ++ + L + ++ ++D+ + G LEE+ + G+
Sbjct: 471 TVSMAYGQMYHCQTLKLGLGASEYVS------GALIDLYAKRGSLEESWKAFGE 518
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 168/357 (47%), Gaps = 32/357 (8%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYST 62
MY K G A +F + D+VSW TV+S +DA+S M GV + VT+
Sbjct: 304 MYYKCGTPGCARRLFEFMGERDVVSWTTVMS--MDREDAVSLFNGMMRDGVAPNEVTFVA 361
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
LS H G +H++ +K GL + N+ ITMY++ R+ +A+ +F MP+ +
Sbjct: 362 ILSAMPGHCPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMIFGLMPHPE 421
Query: 123 SVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL--G 178
++WNA++SGY Q+ +EA L+++++ + +F S SA + + + G
Sbjct: 422 VIAWNALISGYAQNEMCQDALEAFLSMVKITKP----SETTFASILSAVTAVETVSMAYG 477
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-- 236
+ H ++K+G G V L+ Y+K ++ K F R++I+WT +IS N
Sbjct: 478 QMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAFGETVHRSLIAWTAIISANSKH 537
Query: 237 ---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI-HGLCIKTNFLSEPSV 292
+ VSLF +M GV P+ V + ++ A GR I + K P
Sbjct: 538 GNYDGVVSLFNDMARSGVTPDGVVLLSVLTACRYSGFASLGREIFESMATKHGAELWPEH 597
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
C++ M R ++++E++ ++ +G S++A+Q+ G +
Sbjct: 598 YACVVDMLGRAGRLEEAEELMLQM----------------PSGPSVSAMQSLLGACR 638
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 9/187 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY K + D A IF + +P++++WN ++SG+ +++ DAL L M I +
Sbjct: 398 ITMYAKLRRMDDAKMIFGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSMVKITKPSE- 456
Query: 58 VTYSTALSFCLDHE--GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T+++ LS E +G H +K GL + YV ALI +Y++ G L E+ + F
Sbjct: 457 TTFASILSAVTAVETVSMAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAF 516
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKN 174
E ++ ++W AI+S ++ G+Y + +++L +M R G+ D V S +AC +
Sbjct: 517 GETVHRSLIAWTAIISANSKHGNY--DGVVSLFNDMARSGVTPDGVVLLSVLTACRYSGF 574
Query: 175 LELGKQI 181
LG++I
Sbjct: 575 ASLGREI 581
>gi|255566993|ref|XP_002524479.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536267|gb|EEF37919.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 576
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/406 (70%), Positives = 340/406 (83%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
MNMYCKSGQF ALCIF LN+PDIVSWNTVLSGF++S++AL+FAL+MN GVVFDAVTY
Sbjct: 120 MNMYCKSGQFTHALCIFETLNDPDIVSWNTVLSGFQRSEEALNFALKMNSNGVVFDAVTY 179
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+T L+FC E FLFGLQLHS I+K GLD EV+VGNALITMYSRWG L+EA RVF+EM
Sbjct: 180 TTVLAFCSRIEEFLFGLQLHSCILKVGLDCEVFVGNALITMYSRWGCLLEAGRVFEEMQT 239
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
D VSWNAI+SGYTQ G YG+EAI IEM+R+G++LDHVSFTSA SACGHE+NLE+G+Q
Sbjct: 240 TDLVSWNAIISGYTQAGIYGLEAISIFIEMVRRGIKLDHVSFTSAISACGHERNLEVGRQ 299
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAV 240
+HG+SIK GYG HVSVGNVL+STYSKCE+ DA VF+ M +RNV+SWTTMIS++ E+AV
Sbjct: 300 VHGLSIKRGYGKHVSVGNVLISTYSKCEIIEDAKLVFQNMLERNVVSWTTMISIDEENAV 359
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
S F EMR D V PNDVTF+GLIHAI+IG+LV+ G+ +HG CIK+ F EPSV N ITMY
Sbjct: 360 SFFNEMRYDEVDPNDVTFVGLIHAITIGDLVESGKTVHGFCIKSGFSLEPSVQNSFITMY 419
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
A+F S +DS KVF+EL+ REII+WNALISGYAQNGLS A+ FF + ESKPN YTFGS
Sbjct: 420 AKFGSAEDSMKVFEELNYREIITWNALISGYAQNGLSQEAIITFFSALAESKPNQYTFGS 479
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
VL+A+GAAEDISLKHGQ CH+ I+K+G +SDP+V SALLDMY KRG
Sbjct: 480 VLSAIGAAEDISLKHGQMCHAQIMKLGFNSDPVVSSALLDMYAKRG 525
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 137/463 (29%), Positives = 231/463 (49%), Gaps = 26/463 (5%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D VT + AL C + L G Q+H + GL S + V N+L+ MY + G+ A +F
Sbjct: 79 DEVTIALALKSCCGDK--LLGSQIHGFAITSGLYSFITVPNSLMNMYCKSGQFTHALCIF 136
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ + + D VSWN +LSG+ + EA+ ++M G+ D V++T+ + C +
Sbjct: 137 ETLNDPDIVSWNTVLSGFQRSE----EALNFALKMNSNGVVFDAVTYTTVLAFCSRIEEF 192
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G Q+H +K+G V VGN L++ YS+ +A +VF M +++SW +IS
Sbjct: 193 LFGLQLHSCILKVGLDCEVFVGNALITMYSRWGCLLEAGRVFEEMQTTDLVSWNAIISGY 252
Query: 236 RE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ +A+S+F EM G+ + V+F I A ++ GR +HGL IK +
Sbjct: 253 TQAGIYGLEAISIFIEMVRRGIKLDHVSFTSAISACGHERNLEVGRQVHGLSIKRGYGKH 312
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N LI+ Y++ E ++D++ VF + R ++SW +IS +N +S FF ++
Sbjct: 313 VSVGNVLISTYSKCEIIEDAKLVFQNMLERNVVSWTTMISIDEENAVS------FFNEMR 366
Query: 350 --ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
E PN TF +++A+ + + + G+ H IK G +P V ++ + MY K GS
Sbjct: 367 YDEVDPNDVTFVGLIHAITIGDLV--ESGKTVHGFCIKSGFSLEPSVQNSFITMYAKFGS 424
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHG-DYESVMNQFKEMENKGVRPDSITFLSVLT 466
+S +VF E + W A+IS A++G E+++ F + +P+ TF SVL+
Sbjct: 425 AEDSMKVFEELNYREIITWNALISGYAQNGLSQEAIITFFSALAES--KPNQYTFGSVLS 482
Query: 467 VCGRNGMIH-KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG 508
G I K + + + P S ++DM + G
Sbjct: 483 AIGAAEDISLKHGQMCHAQIMKLGFNSDPVVSSALLDMYAKRG 525
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 243/491 (49%), Gaps = 28/491 (5%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
+D V+ A +C +K LG QIHG +I G + ++V N LM+ Y K A +
Sbjct: 78 IDEVTIALALKSCCGDK--LLGSQIHGFAITSGLYSFITVPNSLMNMYCKSGQFTHALCI 135
Query: 217 FRRMHDRNVISWTTMIS--MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
F ++D +++SW T++S E+A++ +M +GV + VT+ ++ S G
Sbjct: 136 FETLNDPDIVSWNTVLSGFQRSEEALNFALKMNSNGVVFDAVTYTTVLAFCSRIEEFLFG 195
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
+H +K E V N LITMY+R+ + ++ +VF+E+ +++SWNA+ISGY Q
Sbjct: 196 LQLHSCILKVGLDCEVFVGNALITMYSRWGCLLEAGRVFEEMQTTDLVSWNAIISGYTQA 255
Query: 335 GL-SLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
G+ L A+ F +++ K + +F S ++A G ++ + G++ H IK G
Sbjct: 256 GIYGLEAISIFIEMVRRGIKLDHVSFTSAISACGHERNLEV--GRQVHGLSIKRGYGKHV 313
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
VG+ L+ Y K I +++ VF E++ +WT +IS D E+ ++ F EM
Sbjct: 314 SVGNVLISTYSKCEIIEDAKLVFQNMLERNVVSWTTMISI-----DEENAVSFFNEMRYD 368
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD-YHIEPSPDHYSCMVDMLGRVGRLE 511
V P+ +TF+ ++ ++ G+ + +K + +EPS + + M + G E
Sbjct: 369 EVDPNDVTFVGLIHAITIGDLVESGKTVHGFCIKSGFSLEPSVQN--SFITMYAKFGSAE 426
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG---ERIADALMKMEPAGSGSYVLMSN 568
++ ++ + L+ + + I G + G E I + + Y S
Sbjct: 427 DSMKVFEE------LNYREIITWNALISGYAQNGLSQEAIITFFSALAESKPNQYTFGSV 480
Query: 569 LYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSS-GDNTHPRSEEIYRM 627
L A G E ++ L+ G ++GF+ V L ++ GD +HP+SEEI R+
Sbjct: 481 LSA-IGAAEDIS-LKHGQMCHAQIMKLGFNSDPVVSSALLDMYAKRGDKSHPQSEEICRI 538
Query: 628 AECLGSEMKYL 638
A+CLGSEMK+L
Sbjct: 539 ADCLGSEMKFL 549
>gi|222637655|gb|EEE67787.1| hypothetical protein OsJ_25518 [Oryza sativa Japonica Group]
Length = 588
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 273/543 (50%), Positives = 366/543 (67%), Gaps = 5/543 (0%)
Query: 56 DAVTYSTALSFCLDH-EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
DAVT + ALS EGFL QLH+L + GL ++V+VGNAL+T YSR G L EAR V
Sbjct: 10 DAVTCTVALSLAAGRGEGFLV-RQLHALAWRSGLAADVFVGNALVTAYSRGGSLGEARSV 68
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEK 173
FD+MP +D VSWNA++ G QDGD E I + M+R G ++ D +S S ACG E
Sbjct: 69 FDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEG 128
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
LELG+Q+HG ++K+G +VS+GNVL++ Y KC G A ++F M +R+V+SWTT IS
Sbjct: 129 KLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAIS 188
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
M+ EDA++LF MR DGV PN+VTF+ L+ A+ + +M+H C+K E +
Sbjct: 189 MDGEDALTLFNGMRRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAAS 248
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N LITMYA+ M D+ VFD + REII+WNA+ISGYAQNG A++ F + + P
Sbjct: 249 NSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSMARCLTP 308
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N TF SVL+AV A E +S+ +GQ HS + +G V AL+DMY KRG++ ES++
Sbjct: 309 NETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRK 368
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
F+ET+++S AWTAIISA ARHG Y +VM+ F +M GV PD + L+VLT C GM
Sbjct: 369 AFHETEQRSLIAWTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGM 428
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ GR +FDSM D +E P+HYSC+VDMLGR GRL EAEEL+ ++P GP +S LQSLL
Sbjct: 429 VDAGRDIFDSMAADRGVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLL 488
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
GACRIHG+ E+GERIA L + EP SG+YVL+SN+YA+ GDW+ VA +R+ M+ K R+
Sbjct: 489 GACRIHGDAEIGERIARILTEKEPTESGAYVLLSNIYADVGDWDGVAKVRRKMRDK--RR 546
Query: 594 EVG 596
+ G
Sbjct: 547 QEG 549
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 210/461 (45%), Gaps = 36/461 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD----ALSFALRMNLIG-VVF 55
+ Y + G +A +F+++ D+VSWN ++ G + D + LRM G V
Sbjct: 53 VTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQP 112
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D ++ + + C G Q+H VK G++ V +GN L+ MY + G ARR+F
Sbjct: 113 DRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLF 172
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D M +D VSW +S DG+ +A+ M R G+ + V+F + SA +
Sbjct: 173 DAMSERDVVSWTTAIS---MDGE---DALTLFNGMRRDGVPPNEVTFVALMSALPADCPA 226
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+ +H +K + N L++ Y+K DA VF M R +I+W +IS
Sbjct: 227 RGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGY 286
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK--EGRMIHGLCIKTNFLS 288
+ DA+ LF M + PN+ TF ++ A++ V G+M H + F
Sbjct: 287 AQNGRCNDALELFSSM-ARCLTPNETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGD 345
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
V LI MYA+ ++++S K F E R +I+W A+IS A++G S AV + FG +
Sbjct: 346 SEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHG-SYGAVMSLFGDM 404
Query: 349 KES--KPNAYTFGSVLNA------VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
S P+ +VL A V A DI S G++ P S ++D
Sbjct: 405 ARSGVAPDGVVLLAVLTACRYGGMVDAGRDIF-------DSMAADRGVELWPEHYSCVVD 457
Query: 401 MYGKRGSIFESQRVFNETQE-KSEFAWTAIISALARHGDYE 440
M G+ G + E++ + S A +++ A HGD E
Sbjct: 458 MLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIHGDAE 498
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 181/382 (47%), Gaps = 30/382 (7%)
Query: 150 MMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
M+R G +R D V+ T A S L +Q+H ++ + G V VGN L++ YS+
Sbjct: 1 MLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVGNALVTAYSRGG 60
Query: 209 VTGDANKVFRRMHDRNVISWTTMISMNREDA------VSLFKEMRLDG-VCPNDVTFIGL 261
G+A VF M R+++SW +I +D + +F M DG V P+ ++ +
Sbjct: 61 SLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSV 120
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
I A ++ GR +HG +K S+ N L+ MY + + + ++FD +S R++
Sbjct: 121 IPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDV 180
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
+SW IS ++ L+L F G+ ++ PN TF ++++A+ A D + Q H
Sbjct: 181 VSWTTAISMDGEDALTL-----FNGMRRDGVPPNEVTFVALMSALPA--DCPARGAQMVH 233
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
+ +K + + ++L+ MY K + +++ VF+ + AW A+IS A++G
Sbjct: 234 AACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCN 293
Query: 441 SVMNQFKEMENKGVRPDSITFLSVL-------TVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
+ F M + + P+ TF SVL TV G ++ R L ++
Sbjct: 294 DALELFSSMA-RCLTPNETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVA-- 350
Query: 494 PDHYSCMVDMLGRVGRLEEAEE 515
++DM + G LEE+ +
Sbjct: 351 ----GALIDMYAKRGNLEESRK 368
>gi|449464614|ref|XP_004150024.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Cucumis sativus]
Length = 647
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 295/646 (45%), Positives = 398/646 (61%), Gaps = 64/646 (9%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDDA---LSF---ALRMNLIGVVFDAVTYSTALSFCLD 69
+F+ P+ S+N VL + D A L F R L G D T AL C
Sbjct: 29 LFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNA-DEFTLVLALKACC- 86
Query: 70 HEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
GF G Q+H ++ G S + V N+L+ MY + G+L A VF + + D VSWN
Sbjct: 87 --GFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNT 144
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
ILSG+ + + A+ + M G++ D V++T+A S C + G Q+H +++K
Sbjct: 145 ILSGFEKSEN----ALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKC 200
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED------AVSL 242
G+ V VGN L++ Y + E DA KVF M R+ +SW+ MI+ ++ A+ +
Sbjct: 201 GFKGDVFVGNALVTMYWRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILV 260
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
F +M +GV ++V G + ++ G+ IH + +KT + SV N LI+ Y++
Sbjct: 261 FVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCVAVKTGHETHTSVGNVLISTYSK 320
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVL 362
E ++D++ VF+ ++ R +IS L
Sbjct: 321 CEIIEDAKAVFELINDRNVIS--------------------------------------L 342
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
NA+ A EDISLKHGQRCHSH+IKVGL+ DPI+ ALLDMY KRGSI ESQRVFNET ++S
Sbjct: 343 NAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKES 402
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
+FAWTA+IS A+HGDYESV+ F+EME + ++PD++ FLSVLT C RN M+ GR F+
Sbjct: 403 QFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFN 462
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
M+KD+ IEP +HYSCMVDMLGR GRLEEAEE++ +IPGGPG+S LQSLLGACR HGNV
Sbjct: 463 MMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLGACRTHGNV 522
Query: 543 EMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADV 602
EM ERIA+ LMK EP SG YVLMSNLYA+KGDWE VA +RK M+ +GV KE+GFSW DV
Sbjct: 523 EMAERIANDLMKKEPLESGPYVLMSNLYAQKGDWEKVAKVRKEMRERGVMKEIGFSWVDV 582
Query: 603 GDIDG----LHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
G+ LHGFSSGD +HP+SEEI+RMA+ +G+EMK+L RER
Sbjct: 583 GNFGASNLYLHGFSSGDVSHPQSEEIFRMAKYMGAEMKFLKD-RER 627
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/493 (43%), Positives = 297/493 (60%), Gaps = 75/493 (15%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
MNMYCKSGQ ++A +F NL++PDIVSWNT+LSGFEKS++ALSFALRMNL GV FD+VTY
Sbjct: 115 MNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEKSENALSFALRMNLNGVKFDSVTY 174
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+TALSFCLD E FLFG QLH+L +K G +V+VGNAL+TMY RW LV+AR+VFDEMP+
Sbjct: 175 TTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYWRWEHLVDARKVFDEMPS 234
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D VSW+A+++GY Q+GD G++AIL ++M+R+G++ D+V T A S CGHE+NLELGKQ
Sbjct: 235 RDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQ 294
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAV 240
IH V++K G+ TH SVGNVL+STYSKCE+ DA VF ++DRNVIS
Sbjct: 295 IHCVAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVIS------------- 341
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLV--KEGRMIHGLCIKTNFLSEPSVCNCLIT 298
++AIS G + K G+ H IK +P + L+
Sbjct: 342 ---------------------LNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLD 380
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYT 357
MYA+ S+Q+S++VF+E S +W ALISGYAQ+G + ++ F + KE KP+A
Sbjct: 381 MYAKRGSIQESQRVFNETSKESQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVI 440
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-DSDPIVGSALLDMYGKRGSIFE------ 410
F SVL A + + G++ + +IK + + + S ++DM G+ G + E
Sbjct: 441 FLSVLTACSRNRMVDM--GRQFFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILA 498
Query: 411 --------------------------SQRVFNETQEKSEF---AWTAIISALARHGDYES 441
++R+ N+ +K + + + A+ GD+E
Sbjct: 499 RIPGGPGVSALQSLLGACRTHGNVEMAERIANDLMKKEPLESGPYVLMSNLYAQKGDWEK 558
Query: 442 VMNQFKEMENKGV 454
V KEM +GV
Sbjct: 559 VAKVRKEMRERGV 571
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/655 (36%), Positives = 389/655 (59%), Gaps = 23/655 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY + G +A +FN + D++SWN +++G+ + +D A+ +M GV
Sbjct: 427 ISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGR 486
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ LS C + + G +H I++ G+ S ++ NAL+ MY R G ++EA+ VF+
Sbjct: 487 VTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEG 546
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILAL-IEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+D +SWN++++G+ Q G Y EA L +EM ++GL D ++F S C + + LE
Sbjct: 547 TRARDIISWNSMIAGHAQHGSY--EAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALE 604
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---S 233
LG+QIH + I+ G V++GN L++ Y +C DA +VF + RNV+SWT MI +
Sbjct: 605 LGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFA 664
Query: 234 MNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
ED A LF +M+ DG P TF ++ A + EG+ + + + + +
Sbjct: 665 DQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTG 724
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI+ Y++ SM D+ KVFD++ R+I+SWN +I+GYAQNGL A+Q + + ++
Sbjct: 725 VGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQG 784
Query: 352 KP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
N ++F S+LNA + +L+ G+R H+ I+K + D VG+AL+ MY K GS+ E
Sbjct: 785 VVLNKFSFVSILNACSSFS--ALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEE 842
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+Q VF+ EK+ W A+I+A A+HG ++ F M+ +G++PD TF S+L+ C
Sbjct: 843 AQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNH 902
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G++ +G +F S+ + + P+ +HY C+V +LGR GR +EAE L+ Q+P P +V +
Sbjct: 903 SGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWE 962
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGACRIHGNV + E A+ +K+ YVL+SN+YA G W+ VA +R+ M+ +G
Sbjct: 963 TLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRG 1022
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
+RKE G SW +V +I +H F + D +HP + EIY E+K L+ + ERA
Sbjct: 1023 IRKEPGRSWIEVDNI--IHEFIAADRSHPETAEIY-------EELKRLSLEMERA 1068
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 276/523 (52%), Gaps = 13/523 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
M+ + G A + D+V +N +++ + ++A +M GVV + T
Sbjct: 328 MFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTT 387
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y + L+ C + G +HS I + G S+V +GN+LI+MY+R G L AR +F+ MP
Sbjct: 388 YLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMP 447
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D +SWNAI++GY + D G EA+ +M +G++ V+F SAC + GK
Sbjct: 448 KRDLISWNAIIAGYARREDRG-EAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGK 506
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR--- 236
IH ++ G ++ + N LM+ Y +C +A VF R++ISW +MI+ +
Sbjct: 507 MIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHG 566
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
E A LF EM+ +G+ P+ +TF ++ ++ GR IH L I++ + ++ N
Sbjct: 567 SYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGN 626
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI MY R S+QD+ +VF L R ++SW A+I G+A G A + F+ + + KP
Sbjct: 627 ALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKP 686
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
TF S+L A ++ L G++ +HI+ G + D VG+AL+ Y K GS+ ++++
Sbjct: 687 VKSTFSSILKACMSSA--CLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARK 744
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF++ + +W +I+ A++G + + +M+ +GV + +F+S+L C
Sbjct: 745 VFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSA 804
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ +G+ + ++K ++ + ++ M + G LEEA+E+
Sbjct: 805 LEEGKRVHAEIVKR-KMQGDVRVGAALISMYAKCGSLEEAQEV 846
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/527 (29%), Positives = 272/527 (51%), Gaps = 17/527 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS-----GFEKSDDALSFALRMNLIGVVF 55
+NMY K A +F + D++SWN+++S GF+K A M G +
Sbjct: 124 INMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKK--AFQLFEEMQTAGFIP 181
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+TY + L+ C +G ++HS I++ G + V N+L+ MY + L AR+VF
Sbjct: 182 SKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVF 241
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ +D VS+N +L Y Q Y E I +M +G+ D V++ + A L
Sbjct: 242 SGIYRRDVVSYNTMLGLYAQKA-YVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSML 300
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
+ GK+IH +++ G + + VG L + + +C A + DR+V+ + +I+
Sbjct: 301 DEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAAL 360
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ E+A + +MR DGV N T++ +++A S + G +IH + S+
Sbjct: 361 AQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDV 420
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ N LI+MYAR + + ++F+ + R++ISWNA+I+GYA+ A++ + + E
Sbjct: 421 QIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSE 480
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP TF +L+A + S G+ H I++ G+ S+ + +AL++MY + GSI
Sbjct: 481 GVKPGRVTFLHLLSACTNSSAYS--DGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIM 538
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E+Q VF T+ + +W ++I+ A+HG YE+ F EM+ +G+ PD ITF SVL C
Sbjct: 539 EAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCK 598
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ GR + ++ + ++ + + +++M R G L++A E+
Sbjct: 599 NPEALELGRQIH-MLIIESGLQLDVNLGNALINMYIRCGSLQDAYEV 644
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 251/469 (53%), Gaps = 18/469 (3%)
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y + C ++H+ +V+ G+ ++++ N LI MY + + +A +VF +
Sbjct: 83 AAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLK 142
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D +SWN+++S Y Q G + +A EM G +++ S +AC LE
Sbjct: 143 MPRRDVISWNSLISCYAQQG-FKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEY 201
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR- 236
GK+IH I+ GY V N L++ Y KCE A +VF ++ R+V+S+ TM+ +
Sbjct: 202 GKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQ 261
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E+ + LF +M +G+ P+ VT+I L+ A + +++ EG+ IH L + S+ V
Sbjct: 262 KAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRV 321
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF-----GV 347
L TM+ R + +++ + + R+++ +NALI+ AQ+G A + ++ GV
Sbjct: 322 GTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGV 381
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ N T+ SVLNA ++ +L G+ HSHI +VG SD +G++L+ MY + G
Sbjct: 382 VM----NRTTYLSVLNACSTSK--ALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGD 435
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ +FN ++ +W AII+ AR D M +K+M+++GV+P +TFL +L+
Sbjct: 436 LPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSA 495
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
C + G+ + + +L+ I+ + + +++M R G + EA+ +
Sbjct: 496 CTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNV 543
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 186/370 (50%), Gaps = 9/370 (2%)
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
+ ++ C +++L K+IH ++ G G + + N+L++ Y KC DA++VF
Sbjct: 81 NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVF 140
Query: 218 RRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
+M R+VISW ++IS ++ A LF+EM+ G P+ +T+I ++ A ++
Sbjct: 141 LKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELE 200
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G+ IH I+ + +P V N L+ MY + E + + +VF + R+++S+N ++ YA
Sbjct: 201 YGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYA 260
Query: 333 QNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
Q + F + E P+ T+ ++L+A L G+R H + GL+SD
Sbjct: 261 QKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPS--MLDEGKRIHKLAVNEGLNSD 318
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
VG+AL M+ + G + +++ ++ + A+I+ALA+HG YE Q+ +M +
Sbjct: 319 IRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRS 378
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
GV + T+LSVL C + + G L S + + + ++ M R G L
Sbjct: 379 DGVVMNRTTYLSVLNACSTSKALGAG-ELIHSHISEVGHSSDVQIGNSLISMYARCGDLP 437
Query: 512 EAEELVGQIP 521
A EL +P
Sbjct: 438 RARELFNTMP 447
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/645 (36%), Positives = 378/645 (58%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY + G KA +F + D++SWN +++G+ + +D A+ +M GV
Sbjct: 372 ISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGR 431
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ LS C + + G +H I++ G+ S ++ NAL+ MY R G L+EA+ VF+
Sbjct: 432 VTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEG 491
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+D +SWN++++G+ Q G Y A EM + L D+++F S S C + + LEL
Sbjct: 492 TQARDVISWNSMIAGHAQHGSYET-AYKLFQEMQNEELEPDNITFASVLSGCKNPEALEL 550
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
GKQIHG + G V++GN L++ Y +C DA VF + R+V+SWT MI +
Sbjct: 551 GKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCAD 610
Query: 235 NRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
ED A+ LF +M+ +G P TF ++ + + EG+ + + + + + V
Sbjct: 611 QGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGV 670
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N LI+ Y++ SM D+ +VFD++ R+I+SWN +I+GYAQNGL AV+ + + ++
Sbjct: 671 GNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDV 730
Query: 353 -PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
PN ++F S+LNA + +L+ G+R H+ I+K L D VG+AL+ MY K GS E+
Sbjct: 731 VPNKFSFVSLLNACSSFS--ALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEA 788
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
Q VF+ EK+ W A+I+A A+HG + F ME +G++PD TF S+L+ C
Sbjct: 789 QEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHA 848
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G +F SM +Y + P+ +HY C+V +LGR R +EAE L+ Q+P P +V ++
Sbjct: 849 GLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWET 908
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGACRIHGN+ + E A+ +K+ Y+L+SN+YA G W+ VA +R+ M+ +G+
Sbjct: 909 LLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGI 968
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
RKE G SW +V +I +H F + D +HP + EIY + L EM+
Sbjct: 969 RKEPGRSWIEVDNI--IHEFIAADRSHPETAEIYAELKRLSVEME 1011
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 154/529 (29%), Positives = 275/529 (51%), Gaps = 13/529 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ M + G D A F + D+V +N +++ + +A RM GV +
Sbjct: 271 VTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNR 330
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY + L+ C + G +HS I + G S+V +GNALI+MY+R G L +AR +F
Sbjct: 331 TTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYT 390
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D +SWNAI++GY + D G EA+ +M +G++ V+F SAC +
Sbjct: 391 MPKRDLISWNAIIAGYARREDRG-EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYAD 449
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR- 236
GK IH ++ G ++ + N LM+ Y +C +A VF R+VISW +MI+ +
Sbjct: 450 GKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQ 509
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E A LF+EM+ + + P+++TF ++ ++ G+ IHG ++ + ++
Sbjct: 510 HGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNL 569
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI MY R S+QD+ VF L R+++SW A+I G A G + A++ F+ + E
Sbjct: 570 GNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGF 629
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P TF S+L ++ L G++ ++I+ G + D VG+AL+ Y K GS+ ++
Sbjct: 630 RPVKSTFSSILKVCTSSA--CLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDA 687
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VF++ + +W II+ A++G ++ + +M+ + V P+ +F+S+L C
Sbjct: 688 REVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSF 747
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ +G+ + ++K ++ + ++ M + G EA+E+ I
Sbjct: 748 SALEEGKRVHAEIVKR-KLQGDVRVGAALISMYAKCGSQGEAQEVFDNI 795
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 156/551 (28%), Positives = 286/551 (51%), Gaps = 18/551 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS-----GFEKSDDALSFALRMNLIGVVF 55
+NMY K A +F + D++SWN+++S GF+K A M G +
Sbjct: 69 INMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKK--AFQLFEEMQNAGFIP 126
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ +TY + L+ C G ++HS I+K G + V N+L++MY + G L AR+VF
Sbjct: 127 NKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVF 186
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ +D VS+N +L Y Q Y E + +M +G+ D V++ + A L
Sbjct: 187 AGISPRDVVSYNTMLGLYAQKA-YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSML 245
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
+ GK+IH ++++ G + + VG L++ +C A + F+ DR+V+ + +I+
Sbjct: 246 DEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAAL 305
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A + MR DGV N T++ +++A S ++ G++IH + S+
Sbjct: 306 AQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDV 365
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ N LI+MYAR + + ++F + R++ISWNA+I+GYA+ A++ + + E
Sbjct: 366 QIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSE 425
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP TF +L+A A + G+ H I++ G+ S+ + +AL++MY + GS+
Sbjct: 426 GVKPGRVTFLHLLSA--CANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLM 483
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E+Q VF TQ + +W ++I+ A+HG YE+ F+EM+N+ + PD+ITF SVL+ C
Sbjct: 484 EAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCK 543
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+ G+ + + + ++ + + +++M R G L++A + + +S
Sbjct: 544 NPEALELGKQIH-GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMS-W 601
Query: 530 QSLLGACRIHG 540
+++G C G
Sbjct: 602 TAMIGGCADQG 612
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 271/512 (52%), Gaps = 17/512 (3%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ TY L C ++H+ +V+ + ++++ N LI MY + +++A +VF
Sbjct: 26 ERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
EMP +D +SWN+++S Y Q G + +A EM G + +++ S +AC L
Sbjct: 86 KEMPRRDVISWNSLISCYAQQG-FKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E GK+IH IK GY V N L+S Y KC A +VF + R+V+S+ TM+ +
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204
Query: 236 REDA-----VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A + LF +M +G+ P+ VT+I L+ A + +++ EG+ IH L ++ S+
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI 264
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V L+TM R + +++ F + R+++ +NALI+ AQ+G ++ A + ++ + +
Sbjct: 265 RVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSD 324
Query: 351 SKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
N T+ S+LNA ++ +L+ G+ HSHI + G SD +G+AL+ MY + G +
Sbjct: 325 GVALNRTTYLSILNACSTSK--ALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP 382
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++ +F ++ +W AII+ AR D M +K+M+++GV+P +TFL +L+ C
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+ G+ + + +L+ I+ + + +++M R G L EA+ + G V+
Sbjct: 443 NSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNV---FEGTQARDVI 498
Query: 530 --QSLLGACRIHGNVEMGERIADALM--KMEP 557
S++ HG+ E ++ + ++EP
Sbjct: 499 SWNSMIAGHAQHGSYETAYKLFQEMQNEELEP 530
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/646 (36%), Positives = 384/646 (59%), Gaps = 18/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K+ + +F+ + ++VSW ++L+G+ ++ + AL +M L G+ +
Sbjct: 134 VDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNP 193
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L G+Q+H++++K GLDS ++VGN+++ MYS+ + +A+ VFD
Sbjct: 194 FTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDS 253
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M N+++VSWN++++G+ +G +EA M +G++L F + C + K +
Sbjct: 254 MENRNAVSWNSMIAGFVTNG-LDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSF 312
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS--- 233
KQ+H IK G +++ LM YSKC DA K+F MH +NV+SWT +IS
Sbjct: 313 AKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYV 372
Query: 234 -MNRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
R D A++LF +MR +GV PN T+ ++ A N IH L +KTN+ + PS
Sbjct: 373 QNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA----NAAVSPSQIHALVVKTNYENSPS 428
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L Y++ ++ K+F+ + ++I++W+A++SGYAQ G AV+ F + KE
Sbjct: 429 VGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEG 488
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+PN +TF SVLNA AA S++ G++ HS IK G + V SAL+ MY KRG+I
Sbjct: 489 VEPNEFTFSSVLNAC-AAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIES 547
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ VF ++ +W ++IS A+HG + + F+EM +K + D ITF+ V++ C
Sbjct: 548 ANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTH 607
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++++G+ FD M+KDYHI P+ +HYSCMVD+ R G LE+A +L+ ++P G ++ +
Sbjct: 608 AGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWR 667
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL ACR+H NV++GE A+ L+ ++P S +YVL+SN+YA G+W+ A +RK M K
Sbjct: 668 TLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKK 727
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V+KE G+SW +V + F +GD +HP+S+ IY E L +K
Sbjct: 728 VKKEAGYSWIEVK--NKTFSFMAGDLSHPQSDRIYLKLEELSIRLK 771
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 150/503 (29%), Positives = 250/503 (49%), Gaps = 27/503 (5%)
Query: 29 NTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLF----GLQLHS 81
N +L F ++D +AL+ L + G D + S L C G LF G Q+H
Sbjct: 61 NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVC----GCLFDRIVGKQVHC 116
Query: 82 LIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGV 141
+K G +V VG +L+ MY + + + RVFDEM K+ VSW ++L+GY Q+G
Sbjct: 117 QCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG-LNE 175
Query: 142 EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLM 201
+A+ +M +G++ + +F + + +E G Q+H + IK G + + VGN ++
Sbjct: 176 QALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMV 235
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEMRLDGVCPNDV 256
+ YSK + DA VF M +RN +SW +MI+ N D A LF MRL+GV
Sbjct: 236 NMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQT 295
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
F +I + + + +H IK + ++ L+ Y++ + D+ K+F +
Sbjct: 296 IFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMM 355
Query: 317 -SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLK 374
+ ++SW A+ISGY QNG + A+ F + +E +PN +T+ ++L A A
Sbjct: 356 HGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP---- 411
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
+ H+ ++K ++ P VG+AL D Y K G E+ ++F EK AW+A++S A
Sbjct: 412 --SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYA 469
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR-NGMIHKGRHLFDSMLKDYHIEPS 493
+ GD E + F ++ +GV P+ TF SVL C + +G+ +K +
Sbjct: 470 QMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKS-GFSNA 528
Query: 494 PDHYSCMVDMLGRVGRLEEAEEL 516
S +V M + G +E A E+
Sbjct: 529 LCVSSALVTMYAKRGNIESANEV 551
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 215/413 (52%), Gaps = 15/413 (3%)
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
++++FDE P + N +L ++++ D EA+ + + R G D S + CG
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRN-DQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ +GKQ+H IK G+ VSVG L+ Y K E D +VF M +NV+SWT+
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 231 MISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+++ R E A+ LF +M+L+G+ PN TF ++ ++ V++G +H + IK+
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
S V N ++ MY++ + D++ VFD + R +SWN++I+G+ NGL L A + F+
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ E K F +V+ +++S ++ H +IK G D D + +AL+ Y K
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSF--AKQLHCQVIKNGSDFDLNIKTALMVAYSK 341
Query: 405 RGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
I ++ ++F ++ +WTAIIS ++G + MN F +M +GVRP+ T+ +
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYST 401
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+LT N + + +++ + E SP + + D ++G EA ++
Sbjct: 402 ILTA---NAAVSPSQ--IHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKI 449
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/648 (36%), Positives = 373/648 (57%), Gaps = 15/648 (2%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNL-IGVVFDAVTYS 61
K+G A +F+ ++ D +SW T++SG+ ++D AL M + G+ D S
Sbjct: 61 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
A C + +G LH VK GL + V+VG+AL+ MY++ G++ E RRVF EMP +
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
+ VSW AI++G + G Y EA++ EM R + D +F A AC L G++I
Sbjct: 181 NVVSWTAIITGLVRAG-YNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREI 239
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----MNRE 237
H ++K G+ V N L + Y+KC +F +M R+V+SWTT+I+ M +E
Sbjct: 240 HAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQE 299
Query: 238 D-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
+ AV F MR V PN+ TF +I + ++ G +H L + + SV N +
Sbjct: 300 ECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSI 359
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNA 355
+TMYA+ + S +F E++ R+I+SW+ +I+GY Q G A + + E KP
Sbjct: 360 MTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTE 419
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+ SVL+A G L+HG++ H++++ +GL+ +V SAL++MY K GSI E+ R+F
Sbjct: 420 FALASVLSACGNMA--ILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIF 477
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ + +WTA+I+ A HG V++ F+++ G+RPDS+TF+ VL+ C G++
Sbjct: 478 DAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVD 537
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
G H F++M K Y I PS +HY CM+D+L R GRL +AE ++ +P V +LL A
Sbjct: 538 LGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRA 597
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
CR+HG+VE G R A+ ++++EP +G+++ ++N+YA KG W A +RK MKSKGV KE
Sbjct: 598 CRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEP 657
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
G+SW V D+ + F +GD +HP+ E+IY M + L S + + +E
Sbjct: 658 GWSWIKVKDL--VFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQE 703
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 226/451 (50%), Gaps = 14/451 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K+G+ + +F+ + ++VSW +++G ++ +AL + M V +D+
Sbjct: 158 LDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDS 217
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ AL C D +G ++H+ +K G D +V N L TMY++ G+L +F++
Sbjct: 218 YTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEK 277
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSW I++ Q G A+ A I M + + +F + S C + +E
Sbjct: 278 MSMRDVVSWTTIITTLVQMGQEEC-AVQAFIRMRESDVSPNEYTFAAVISGCANLARIEW 336
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+Q+H + + +G +SV N +M+ Y+KC ++ +F M R+++SW+T+I+ +
Sbjct: 337 GEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQ 396
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A L MR++G P + ++ A +++ G+ +H + V
Sbjct: 397 GGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMV 456
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LI MY + S++++ ++FD +I+SW A+I+GYA++G S + F + +
Sbjct: 457 LSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGL 516
Query: 352 KPNAYTFGSVLNAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P++ TF VL+A A + L H S ++ + ++D+ + G + +
Sbjct: 517 RPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHY--GCMIDLLCRAGRLSD 574
Query: 411 SQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
++ + + + W+ ++ A HGD E
Sbjct: 575 AEHMIEAMPFHRDDVVWSTLLRACRVHGDVE 605
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/647 (35%), Positives = 373/647 (57%), Gaps = 14/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ +Y G ++A +F+ +N +VSWN ++SG+ +A + M G+ D
Sbjct: 86 LKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDK 145
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + LS C +G ++H +++ GL + VGNALI+MY++ G + +ARRVFD
Sbjct: 146 FTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDA 205
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++D VSW + Y + G Y E++ M+++G+R +++ + SACG LE
Sbjct: 206 MASRDEVSWTTLTGAYAESG-YAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEK 264
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GKQIH ++ + + V V L Y KC DA +VF + +R+VI+W TMI
Sbjct: 265 GKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVD 324
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S E+A +F M + V P+ VT++ ++ A + + G+ IH +K +S+
Sbjct: 325 SGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRF 384
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI MY++ SM+D+ +VFD + R+++SW AL+ GYA G + + F ++++
Sbjct: 385 GNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGV 444
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ N T+ VL A + ++LK G+ H+ ++K G+ +D V +AL+ MY K GS+ ++
Sbjct: 445 EANKITYMCVLKA--CSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDA 502
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
RV + W +I LA++G + +F+ M+++ +RP++ TF++V++ C
Sbjct: 503 IRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVR 562
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
++ +GR F SM KDY I P+ HY+CMVD+L R G L EAE+++ +P P ++ +
Sbjct: 563 NLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGA 622
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACR HGNVE+GE+ A+ +K+EP +G+YV +S +YA G W VA LRK MK +GV
Sbjct: 623 LLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGV 682
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+KE G SW +V +H F +GD +HPR+EEIY E L ++K L
Sbjct: 683 KKEPGRSWIEVA--GEVHSFVAGDQSHPRTEEIYSELEALTKQIKSL 727
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 242/463 (52%), Gaps = 12/463 (2%)
Query: 30 TVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD 89
T G+ D L + ++ G D+ Y L C+ + G Q+H I++FG+
Sbjct: 20 TSTDGWYAPADVLQY---LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMK 76
Query: 90 SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
VY+ N L+ +Y G + EARR+FD+ NK VSWN ++SGY G G EA
Sbjct: 77 PNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRG-LGQEAFNLFTL 135
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M ++GL D +F S SAC L G+++H ++ G + +VGN L+S Y+KC
Sbjct: 136 MQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGS 195
Query: 210 TGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHA 264
DA +VF M R+ +SWTT+ E +++ + M +GV P+ +T++ ++ A
Sbjct: 196 VRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSA 255
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+++G+ IH +++ S+ V L MY + +++D+ +VF+ L R++I+W
Sbjct: 256 CGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAW 315
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
N +I G +G A F ++KE P+ T+ ++L+A A L G+ H+
Sbjct: 316 NTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSA--CARPGGLACGKEIHARA 373
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
+K GL SD G+AL++MY K GS+ ++++VF+ ++ +WTA++ A G
Sbjct: 374 VKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESF 433
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ FK+M +GV + IT++ VL C + G+ + ++K
Sbjct: 434 STFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVK 476
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 212/394 (53%), Gaps = 11/394 (2%)
Query: 134 TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
+ DG Y +L + +KG ++D + +C K+L +GKQ+H ++ G +
Sbjct: 21 STDGWYAPADVLQYLH--QKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPN 78
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNR---EDAVSLFKEMRL 248
V + N L+ Y C +A ++F + +++V+SW MIS +R ++A +LF M+
Sbjct: 79 VYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQ 138
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
+G+ P+ TF+ ++ A S + GR +H ++ + +V N LI+MYA+ S++D
Sbjct: 139 EGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRD 198
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGA 367
+ +VFD ++ R+ +SW L YA++G + +++ + +++E +P+ T+ +VL+A G+
Sbjct: 199 ARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGS 258
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
+L+ G++ H+ I++ SD V +AL MY K G++ +++ VF + AW
Sbjct: 259 LA--ALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWN 316
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
+I L G E F M + V PD +T+L++L+ C R G + G+ + +KD
Sbjct: 317 TMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKD 376
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ + +++M + G +++A ++ ++P
Sbjct: 377 GLVS-DVRFGNALINMYSKAGSMKDARQVFDRMP 409
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/648 (36%), Positives = 373/648 (57%), Gaps = 15/648 (2%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNL-IGVVFDAVTYS 61
K+G A +F+ ++ D +SW T++SG+ ++D AL M + G+ D S
Sbjct: 61 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
A C + +G LH VK GL + V+VG+AL+ MY++ G++ E RRVF EMP +
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
+ VSW AI++G + G Y EA++ EM R + D +F A AC L G++I
Sbjct: 181 NVVSWTAIITGLVRAG-YNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREI 239
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----MNRE 237
H ++K G+ V N L + Y+KC +F +M R+V+SWTT+I+ M +E
Sbjct: 240 HAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQE 299
Query: 238 D-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
+ AV F MR V PN+ TF +I + ++ G +H L + + SV N +
Sbjct: 300 ECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSI 359
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNA 355
+TMYA+ + S +F E++ R+I+SW+ +I+GY+Q G A + + E KP
Sbjct: 360 MTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTE 419
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+ SVL+A G L+HG++ H++++ +GL+ +V SAL++MY K GSI E+ R+F
Sbjct: 420 FALASVLSACGNMA--ILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIF 477
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ + +WTA+I+ A HG V++ F+++ G+RPDS+TF+ VL+ C G++
Sbjct: 478 DAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVD 537
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
G F++M K Y I PS +HY CM+D+L R GRL +AE ++ +P V +LL A
Sbjct: 538 LGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRA 597
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
CR+HG+VE G R A+ ++++EP +G+++ ++N+YA KG W A +RK MKSKGV KE
Sbjct: 598 CRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEP 657
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
G+SW V D+ + F +GD +HP+ E+IY M + L S + + +E
Sbjct: 658 GWSWIKVKDL--VFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQE 703
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 227/451 (50%), Gaps = 14/451 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K+G+ + +F+ + ++VSW +++G ++ +AL + M V +D+
Sbjct: 158 LDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDS 217
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ AL C D +G ++H+ +K G D +V N L TMY++ G+L +F++
Sbjct: 218 YTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEK 277
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSW I++ Q G A+ A I M + + +F + S C + +E
Sbjct: 278 MSMRDVVSWTTIITTLVQMGQEEC-AVQAFIRMRESDVSPNEYTFAAVISGCANLARIEW 336
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+Q+H + + +G +SV N +M+ Y+KC ++ +F M R+++SW+T+I+ +
Sbjct: 337 GEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQ 396
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A L MR++G P + ++ A +++ G+ +H + V
Sbjct: 397 GGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMV 456
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LI MY + S++++ ++FD +I+SW A+I+GYA++G S + F + +
Sbjct: 457 LSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGL 516
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSIFE 410
+P++ TF VL+A A + L G R + + K + ++D+ + G + +
Sbjct: 517 RPDSVTFIGVLSACSHAGLVDL--GFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSD 574
Query: 411 SQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
++ + + + W+ ++ A HGD E
Sbjct: 575 AEHMIEAMPFHRDDVVWSTLLRACRVHGDVE 605
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/649 (34%), Positives = 385/649 (59%), Gaps = 19/649 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NM+ K G A +F+NL D+V+W ++++G + A + RM GV D
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V + + L C E G ++H+ + + G D+E+YVG A+++MY++ G + +A VFD
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL 372
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ VSW A+++G+ Q G EA L +M+ G+ + V+F S AC L+
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRID-EAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKR 431
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+QI I+ GYG+ V L+S Y+KC DA++VF ++ +NV++W MI+
Sbjct: 432 GQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ 491
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++A++ F+ + +G+ PN TF +++ + ++ G+ +H L +K S+ V
Sbjct: 492 HEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHV 551
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L++M+ + ++ +F+++ R+++SWN +I+G+ Q+G + A +F +++ES
Sbjct: 552 SNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFD-YFKMMQESG 610
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+ TF +LNA + E +L G+R H+ I + D D +VG+ L+ MY K GSI +
Sbjct: 611 IKPDKITFTGLLNACASPE--ALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIED 668
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ +VF++ +K+ ++WT++I+ A+HG + + F +M+ +GV+PD ITF+ L+ C
Sbjct: 669 AHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAH 728
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+I +G H F SM K+++IEP +HY CMVD+ GR G L EA E + ++ P V
Sbjct: 729 AGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWG 787
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGAC++H NVE+ E+ A ++++P +G +V++SN+YA G W+ VA +RK M +G
Sbjct: 788 ALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRG 847
Query: 591 VRKEVGFSWADVGDIDG-LHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
V K+ G SW +V DG +H F S D THP++EEI+ E L EM+ L
Sbjct: 848 VVKKPGQSWIEV---DGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQL 893
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 299/530 (56%), Gaps = 13/530 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY K G A IF+++ D+ SWN +L G+ + ++A +M V D
Sbjct: 152 INMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDK 211
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L+ C D G +L++LI+K G D++++VG ALI M+ + G + +A +VFD
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN 271
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P +D V+W ++++G + G + +A M +G++ D V+F S AC H + LE
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFK-QACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK++H ++G+ T + VG ++S Y+KC DA +VF + RNV+SWT MI+
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++A F +M G+ PN VTF+ ++ A S + +K G+ I I+ + S+ V
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV 450
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
L++MYA+ S++D+ +VF+++S + +++WNA+I+ Y Q+ A+ F ++KE
Sbjct: 451 RTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGI 510
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN+ TF S+LN +++ SL+ G+ H I+K GL+SD V +AL+ M+ G + +
Sbjct: 511 KPNSSTFTSILNVCKSSD--SLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ +FN+ ++ +W II+ +HG + + FK M+ G++PD ITF +L C
Sbjct: 569 KNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASP 628
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +GR L +++ + + + ++ M + G +E+A ++ ++P
Sbjct: 629 EALTEGRRL-HALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP 677
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 165/531 (31%), Positives = 295/531 (55%), Gaps = 28/531 (5%)
Query: 7 SGQFDKALCI-FNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYST 62
SG+ K C+ F ++ D N VL+ K+ ++A+ R++ + TYS
Sbjct: 58 SGRCPKGRCVVFADIK--DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSA 115
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
L C+ + G ++++ I K G+ ++++ N LI MY++ G + A+++FD+M KD
Sbjct: 116 LLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKD 175
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
SWN +L GY Q G Y EA +M++ ++ D +F S +AC +N++ G++++
Sbjct: 176 VYSWNLLLGGYVQHGLYE-EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELY 234
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR----E 237
+ +K G+ T + VG L++ + KC GDA KVF + R++++WT+MI+ + R +
Sbjct: 235 NLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFK 294
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
A +LF+ M +GV P+ V F+ L+ A + +++G+ +H + + +E V ++
Sbjct: 295 QACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAIL 354
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNA 355
+MY + SM+D+ +VFD + R ++SW A+I+G+AQ+G + FF + ES +PN
Sbjct: 355 SMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHG-RIDEAFLFFNKMIESGIEPNR 413
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
TF S+L A + +LK GQ+ HII+ G SD V +ALL MY K GS+ ++ RVF
Sbjct: 414 VTFMSILGACSSPS--ALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVF 471
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ +++ AW A+I+A +H Y++ + F+ + +G++P+S TF S+L VC + +
Sbjct: 472 EKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLE 531
Query: 476 KGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
G+ + ++K D H+ + +V M G L A+ L +P
Sbjct: 532 LGKWVHFLIMKAGLESDLHVS------NALVSMFVNCGDLMSAKNLFNDMP 576
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 163/325 (50%), Gaps = 41/325 (12%)
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
+G I+ K+ + + N LI MYA+ + ++++FD++ +++ SWN L+ GY
Sbjct: 128 DGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYV 187
Query: 333 QNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
Q+GL A + ++++S KP+ TF S+LNA A ++ G+ ++ I+K G D+D
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVD--KGRELYNLILKAGWDTD 245
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
VG+AL++M+ K G I ++ +VF+ + WT++I+ LARHG ++ N F+ ME
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE 305
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
+GV+PD + F+S+L C + +G+ + M K+ + + ++ M + G +E
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSME 364
Query: 512 EAEELVGQIPG----------------------------------GPGLSVLQSLLGACR 537
+A E+ + G P S+LGAC
Sbjct: 365 DALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACS 424
Query: 538 IHGNVEMGERIADALMKMEPAGSGS 562
++ G++I D +++ AG GS
Sbjct: 425 SPSALKRGQQIQDHIIE---AGYGS 446
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/649 (34%), Positives = 385/649 (59%), Gaps = 19/649 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NM+ K G A +F+NL D+V+W ++++G + A + RM GV D
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V + + L C E G ++H+ + + G D+E+YVG A+++MY++ G + +A VFD
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL 372
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ VSW A+++G+ Q G EA L +M+ G+ + V+F S AC L+
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRID-EAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKR 431
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+QI I+ GYG+ V L+S Y+KC DA++VF ++ +NV++W MI+
Sbjct: 432 GQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ 491
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++A++ F+ + +G+ PN TF +++ + ++ G+ +H L +K S+ V
Sbjct: 492 HEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHV 551
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L++M+ + ++ +F+++ R+++SWN +I+G+ Q+G + A +F +++ES
Sbjct: 552 SNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFD-YFKMMQESG 610
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+ TF +LNA + E +L G+R H+ I + D D +VG+ L+ MY K GSI +
Sbjct: 611 IKPDKITFTGLLNACASPE--ALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIED 668
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ +VF++ +K+ ++WT++I+ A+HG + + F +M+ +GV+PD ITF+ L+ C
Sbjct: 669 AHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAH 728
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+I +G H F SM K+++IEP +HY CMVD+ GR G L EA E + ++ P V
Sbjct: 729 AGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWG 787
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGAC++H NVE+ E+ A ++++P +G +V++SN+YA G W+ VA +RK M +G
Sbjct: 788 ALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRG 847
Query: 591 VRKEVGFSWADVGDIDG-LHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
V K+ G SW +V DG +H F S D THP++EEI+ E L EM+ L
Sbjct: 848 VVKKPGQSWIEV---DGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQL 893
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 299/530 (56%), Gaps = 13/530 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY K G A IF+++ D+ SWN +L G+ + ++A +M V D
Sbjct: 152 INMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDK 211
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L+ C D G +L++LI+K G D++++VG ALI M+ + G + +A +VFD
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN 271
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P +D V+W ++++G + G + +A M +G++ D V+F S AC H + LE
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFK-QACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK++H ++G+ T + VG ++S Y+KC DA +VF + RNV+SWT MI+
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++A F +M G+ PN VTF+ ++ A S + +K G+ I I+ + S+ V
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV 450
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
L++MYA+ S++D+ +VF+++S + +++WNA+I+ Y Q+ A+ F ++KE
Sbjct: 451 RTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGI 510
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN+ TF S+LN +++ SL+ G+ H I+K GL+SD V +AL+ M+ G + +
Sbjct: 511 KPNSSTFTSILNVCKSSD--SLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ +FN+ ++ +W II+ +HG + + FK M+ G++PD ITF +L C
Sbjct: 569 KNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASP 628
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +GR L +++ + + + ++ M + G +E+A ++ ++P
Sbjct: 629 EALTEGRRL-HALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP 677
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 165/531 (31%), Positives = 295/531 (55%), Gaps = 28/531 (5%)
Query: 7 SGQFDKALCI-FNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYST 62
SG+ K C+ F ++ D N VL+ K+ ++A+ R++ + TYS
Sbjct: 58 SGRCPKGRCVVFADIK--DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSA 115
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
L C+ + G ++++ I K G+ ++++ N LI MY++ G + A+++FD+M KD
Sbjct: 116 LLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKD 175
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
SWN +L GY Q G Y EA +M++ ++ D +F S +AC +N++ G++++
Sbjct: 176 VYSWNLLLGGYVQHGLYE-EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELY 234
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR----E 237
+ +K G+ T + VG L++ + KC GDA KVF + R++++WT+MI+ + R +
Sbjct: 235 NLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFK 294
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
A +LF+ M +GV P+ V F+ L+ A + +++G+ +H + + +E V ++
Sbjct: 295 QACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAIL 354
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNA 355
+MY + SM+D+ +VFD + R ++SW A+I+G+AQ+G + FF + ES +PN
Sbjct: 355 SMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHG-RIDEAFLFFNKMIESGIEPNR 413
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
TF S+L A + +LK GQ+ HII+ G SD V +ALL MY K GS+ ++ RVF
Sbjct: 414 VTFMSILGACSSPS--ALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVF 471
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ +++ AW A+I+A +H Y++ + F+ + +G++P+S TF S+L VC + +
Sbjct: 472 EKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLE 531
Query: 476 KGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
G+ + ++K D H+ + +V M G L A+ L +P
Sbjct: 532 LGKWVHFLIMKAGLESDLHVS------NALVSMFVNCGDLMSAKNLFNDMP 576
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 163/325 (50%), Gaps = 41/325 (12%)
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
+G I+ K+ + + N LI MYA+ + ++++FD++ +++ SWN L+ GY
Sbjct: 128 DGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYV 187
Query: 333 QNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
Q+GL A + ++++S KP+ TF S+LNA A ++ G+ ++ I+K G D+D
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVD--KGRELYNLILKAGWDTD 245
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
VG+AL++M+ K G I ++ +VF+ + WT++I+ LARHG ++ N F+ ME
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE 305
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
+GV+PD + F+S+L C + +G+ + M K+ + + ++ M + G +E
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSME 364
Query: 512 EAEELVGQIPG----------------------------------GPGLSVLQSLLGACR 537
+A E+ + G P S+LGAC
Sbjct: 365 DALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACS 424
Query: 538 IHGNVEMGERIADALMKMEPAGSGS 562
++ G++I D +++ AG GS
Sbjct: 425 SPSALKRGQQIQDHIIE---AGYGS 446
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/622 (36%), Positives = 363/622 (58%), Gaps = 14/622 (2%)
Query: 24 DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
+ V W + G+ K+ + AL +M G+ D + + + + C G ++H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
I+ G +S+V VG AL +MY++ G L AR+VFD MP +D VSWNAI++GY+Q+G
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ-P 202
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EA+ EM G++ + + S C H LE GKQIH +I+ G + V V N L
Sbjct: 203 YEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGL 262
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMNRE--DAVSLFKEMRLDGVCPND 255
++ Y+KC A+K+F RM R+V SW +I S+N + +A++ F M++ G+ PN
Sbjct: 263 VNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNS 322
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
+T + ++ A + +++G+ IHG I++ F S V N L+ MYA+ ++ + K+F+
Sbjct: 323 ITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFER 382
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLK 374
+ + +++WNA+ISGY+Q+G A+ F + + KP+++ SVL A A ++L+
Sbjct: 383 MPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPA--CAHFLALE 440
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G++ H + I+ G +S+ +VG+ L+D+Y K G++ +Q++F E+ +WT +I A
Sbjct: 441 QGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYG 500
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
HG E + F +M+ G + D I F ++LT C G++ +G F M DY + P
Sbjct: 501 IHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKL 560
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
+HY+C+VD+LGR G L+EA ++ + P +V +LLGACRIH N+E+GE+ A L +
Sbjct: 561 EHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFE 620
Query: 555 MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSG 614
++P +G YVL+SN+YAE WE VA LRK MK KGV+K+ G S V + F G
Sbjct: 621 LDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVH--RDVQTFLVG 678
Query: 615 DNTHPRSEEIYRMAECLGSEMK 636
D THP+SE+IY M E L +M+
Sbjct: 679 DRTHPQSEQIYAMLEILYEQMR 700
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 241/452 (53%), Gaps = 18/452 (3%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAV 58
+MY K G + A +F+ + D+VSWN +++G+ ++ +AL+ M + G+ ++
Sbjct: 163 SMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSS 222
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T + + C G Q+H ++ G++S+V V N L+ MY++ G + A ++F+ M
Sbjct: 223 TLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERM 282
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P +D SWNAI+ GY+ + + EA+ M +G++ + ++ S AC H LE G
Sbjct: 283 PIRDVASWNAIIGGYSLNSQHH-EALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQG 341
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----- 233
+QIHG +I+ G+ ++ VGN L++ Y+KC A K+F RM +NV++W +IS
Sbjct: 342 QQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQH 401
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ +A++LF EM+ G+ P+ + ++ A + +++G+ IHG I++ F S V
Sbjct: 402 GHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVG 461
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--S 351
L+ +YA+ ++ ++K+F+ + ++++SW +I Y +G A+ A F ++E +
Sbjct: 462 TGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDAL-ALFSKMQETGT 520
Query: 352 KPNAYTFGSVLNAVGAA--EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
K + F ++L A A D L++ Q S GL + L+D+ G+ G +
Sbjct: 521 KLDHIAFTAILTACSHAGLVDQGLQYFQCMKS---DYGLAPKLEHYACLVDLLGRAGHLD 577
Query: 410 ESQRVF-NETQEKSEFAWTAIISALARHGDYE 440
E+ + N + E W A++ A H + E
Sbjct: 578 EANGIIKNMSLEPDANVWGALLGACRIHCNIE 609
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 189/339 (55%), Gaps = 13/339 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+NMY K G + A +F + D+ SWN ++ G+ + +AL+F RM + G+ ++
Sbjct: 263 VNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNS 322
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T + L C G Q+H ++ G +S VGNAL+ MY++ G + A ++F+
Sbjct: 323 ITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFER 382
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP K+ V+WNAI+SGY+Q G + EA+ IEM +G++ D + S AC H LE
Sbjct: 383 MPKKNVVAWNAIISGYSQHG-HPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQ 441
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GKQIHG +I+ G+ ++V VG L+ Y+KC A K+F RM +++V+SWTTMI
Sbjct: 442 GKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGI 501
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ EDA++LF +M+ G + + F ++ A S LV +G + + C+K+++ P +
Sbjct: 502 HGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQG-LQYFQCMKSDYGLAPKL 560
Query: 293 CN--CLITMYARFESMQDSEKVFDELSCREIIS-WNALI 328
+ CL+ + R + ++ + +S + W AL+
Sbjct: 561 EHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALL 599
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/649 (35%), Positives = 381/649 (58%), Gaps = 19/649 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NM+ K G D AL +FNNL D+++W ++++G + A + M GV D
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDK 306
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V + + L C E G ++H+ + + GLD+E+YVG AL++MY++ G + +A VF+
Sbjct: 307 VAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNL 366
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ VSW A+++G+ Q G EA L +M+ G+ + V+F S AC L+
Sbjct: 367 VKGRNVVSWTAMIAGFAQHGRME-EAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQ 425
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+QIH IK GY T V L+S Y+KC DA VF R+ +NV++W MI+
Sbjct: 426 GRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQ 485
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++AV+ F+ + +G+ P+ TF +++ + ++ G+ + L I+ F S+ +
Sbjct: 486 HEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHI 545
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L++M+ + + +F+++ R+++SWN +I+G+ Q+G + A +F +++ES
Sbjct: 546 RNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFD-YFKMMQESG 604
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+ TF +LNA + E +L G+R H+ I + LD D +VG+ L+ MY K GSI +
Sbjct: 605 VKPDQITFTGLLNACASPE--ALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDD 662
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ VF+ +K+ ++WT++I+ A+HG + + F +M+ +GV+PD ITF+ L+ C
Sbjct: 663 AHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAH 722
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+I +G H F+SM KD++IEP +HY CMVD+ GR G L EA E + ++ P +
Sbjct: 723 AGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWG 781
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGAC++H +VE+ E++A ++++P G YV++SN+YA G W+ V +RK M +G
Sbjct: 782 ALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRG 841
Query: 591 VRKEVGFSWADVGDIDG-LHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
V K+ G SW +V DG +H F S D THP+ EEI+ L EMK L
Sbjct: 842 VVKKPGQSWIEV---DGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKL 887
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 189/643 (29%), Positives = 325/643 (50%), Gaps = 43/643 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G + A IF+ + + D+ SWN +L G+ + ++A +M GV D
Sbjct: 146 ISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDK 205
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L+ C D + G +L SLI+ G D++++VG ALI M+ + G + +A +VF+
Sbjct: 206 YTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNN 265
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P +D ++W ++++G + + L + M +G++ D V+F S AC H + LE
Sbjct: 266 LPRRDLITWTSMITGLARHRQFKQACNLFQV-MEEEGVQPDKVAFVSLLKACNHPEALEQ 324
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK++H ++G T + VG L+S Y+KC DA +VF + RNV+SWT MI+
Sbjct: 325 GKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQ 384
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E+A F +M G+ PN VTF+ ++ A S + +K+GR IH IK ++++ V
Sbjct: 385 HGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRV 444
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
L++MYA+ S+ D+ VF+ +S + +++WNA+I+ Y Q+ AV F ++KE
Sbjct: 445 RTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGI 504
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP++ TF S+LN + + + L G+ S II+ G +SD + +AL+ M+ G + +
Sbjct: 505 KPDSSTFTSILNVCKSPDALEL--GKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSA 562
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+FN+ E+ +W II+ +HG+ + + FK M+ GV+PD ITF +L C
Sbjct: 563 MNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASP 622
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
+ +GR L +++ + ++ + ++ M + G +++A + +P S
Sbjct: 623 EALTEGRRL-HALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSM 681
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
+ G + HG G+ + +M+ G K DW G+
Sbjct: 682 ITGYAQ-HGR---GKEALELFCQMQQEGV------------KPDWITFVGALSACAHAGL 725
Query: 592 RKEVGFSWADVGDIDGLHGFSSGD--NTHPRSEEIYRMAECLG 632
KE GLH F S N PR E M + G
Sbjct: 726 IKE------------GLHHFESMKDFNIEPRMEHYGCMVDLFG 756
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 261/475 (54%), Gaps = 22/475 (4%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
TYS+ L C+ H+ G ++H+ I + ++++ N LI+MY++ G A+++FDEM
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P+KD SWN +L GY Q Y EA +M++ G++ D +F +AC KN++ G
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYE-EAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKG 224
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----- 233
++ + + G+ T + VG L++ + KC DA KVF + R++I+WT+MI+
Sbjct: 225 GELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARH 284
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ A +LF+ M +GV P+ V F+ L+ A + +++G+ +H + +E V
Sbjct: 285 RQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVG 344
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-- 351
L++MY + SM+D+ +VF+ + R ++SW A+I+G+AQ+G + FF + ES
Sbjct: 345 TALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHG-RMEEAFLFFNKMIESGI 403
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+PN TF S+L A +LK G++ H IIK G +D V +ALL MY K GS+ ++
Sbjct: 404 EPNRVTFMSILGACSRPS--ALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDA 461
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VF +++ AW A+I+A +H Y++ + F+ + +G++PDS TF S+L VC
Sbjct: 462 RNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSP 521
Query: 472 GMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ G+ + +++ D HI + +V M G L A L +P
Sbjct: 522 DALELGKWVQSLIIRAGFESDLHIR------NALVSMFVNCGDLMSAMNLFNDMP 570
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 254/500 (50%), Gaps = 22/500 (4%)
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
K++ NA L+ ++ G EA+L L+ + +++ +++S C KNL G++
Sbjct: 67 KNTQRANAFLNRLSKAGQLS-EAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGER 125
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MN 235
IH + + N+L+S Y+KC T A ++F M D++V SW ++
Sbjct: 126 IHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRR 185
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
E+A L ++M DGV P+ TF+ +++A + V +G + L + + ++ V
Sbjct: 186 YEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTA 245
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KP 353
LI M+ + + D+ KVF+ L R++I+W ++I+G A++ A F V++E +P
Sbjct: 246 LINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACN-LFQVMEEEGVQP 304
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ F S+L A E +L+ G+R H+ + +VGLD++ VG+ALL MY K GS+ ++
Sbjct: 305 DKVAFVSLLKACNHPE--ALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALE 362
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VFN + ++ +WTA+I+ A+HG E F +M G+ P+ +TF+S+L C R
Sbjct: 363 VFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSA 422
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ +GR + D ++K +I + ++ M + G L +A + +I + +++
Sbjct: 423 LKQGRQIHDRIIKAGYITDDRVR-TALLSMYAKCGSLMDARNVFERI-SKQNVVAWNAMI 480
Query: 534 GACRIHGNVEMGERIADALMK--MEPAGSGSYVLMSNLYA-----EKGDWEMVAILRKGM 586
A H + AL+K ++P S ++ + N+ E G W I+R G
Sbjct: 481 TAYVQHEKYDNAVATFQALLKEGIKP-DSSTFTSILNVCKSPDALELGKWVQSLIIRAGF 539
Query: 587 KSK-GVRKEVGFSWADVGDI 605
+S +R + + + GD+
Sbjct: 540 ESDLHIRNALVSMFVNCGDL 559
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/648 (34%), Positives = 376/648 (58%), Gaps = 18/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y K F +F+ + ++V+W T++SG+ ++ D+ L+ +RM G ++
Sbjct: 135 VDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNS 194
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ AL + GLQ+H+++VK GLD + V N+LI +Y + G + +AR +FD+
Sbjct: 195 FTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK 254
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
K V+WN+++SGY +G +EA+ M +RL SF S C + K L
Sbjct: 255 TEVKSVVTWNSMISGYAANG-LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRF 313
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMISM-- 234
+Q+H +K G+ ++ LM YSKC DA ++F+ + NV+SWT MIS
Sbjct: 314 TEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFL 373
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+E+AV LF EM+ GV PN+ T+ ++ A+ + + + +H +KTN+ +
Sbjct: 374 QNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSST 429
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+ Y + ++++ KVF + ++I++W+A+++GYAQ G + AA++ F + K
Sbjct: 430 VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN +TF S+LN V AA + S+ G++ H IK LDS V SALL MY K+G+I
Sbjct: 490 IKPNEFTFSSILN-VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF +EK +W ++IS A+HG ++ FKEM+ + V+ D +TF+ V C
Sbjct: 549 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTH 608
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G FD M++D I P+ +H SCMVD+ R G+LE+A +++ +P G ++ +
Sbjct: 609 AGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWR 668
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
++L ACR+H E+G A+ ++ M+P S +YVL+SN+YAE GDW+ A +RK M +
Sbjct: 669 TILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERN 728
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
V+KE G+SW +V + + F +GD +HP ++IY E L + +K L
Sbjct: 729 VKKEPGYSWIEVK--NKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDL 774
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 265/531 (49%), Gaps = 23/531 (4%)
Query: 1 MNMYC----KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGV 53
+ +YC S + A +F+ D S+ ++L GF + + +A L ++ +G+
Sbjct: 30 VRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM 89
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
D +S+ L LFG QLH +KFG +V VG +L+ Y + + R+
Sbjct: 90 EMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRK 149
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VFDEM ++ V+W ++SGY ++ E + + M +G + + +F +A E
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNS-MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG 208
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
G Q+H V +K G + V N L++ Y KC A +F + ++V++W +MIS
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268
Query: 234 ---MNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
N D A+ +F MRL+ V ++ +F +I + ++ +H +K FL
Sbjct: 269 GYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAFFGV 347
+ ++ L+ Y++ +M D+ ++F E+ C ++SW A+ISG+ QN AV F +
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++ +PN +T+ +L A + + H+ ++K + VG+ALLD Y K G
Sbjct: 389 KRKGVRPNEFTYSVILTA------LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLG 442
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ E+ +VF+ +K AW+A+++ A+ G+ E+ + F E+ G++P+ TF S+L
Sbjct: 443 KVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Query: 467 VC-GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
VC N + +G+ +K ++ S S ++ M + G +E AEE+
Sbjct: 503 VCAATNASMGQGKQFHGFAIKS-RLDSSLCVSSALLTMYAKKGNIESAEEV 552
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/645 (35%), Positives = 382/645 (59%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+NMY K G +A +F+ + +VSW ++ G+ S+ A +M GVV +
Sbjct: 286 LNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNR 345
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+TY L+ +G +HS I+ G +S++ VG AL+ MY++ G + R+VF++
Sbjct: 346 ITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEK 405
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ N+D ++WN ++ G + G++ EA +M R+G+ + +++ +AC + L
Sbjct: 406 LVNRDLIAWNTMIGGLAEGGNWE-EASEIYHQMQREGMMPNKITYVILLNACVNPTALHW 464
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G++IH +K G+ +SV N L+S Y++C DA +F +M +++ISWT MI
Sbjct: 465 GREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAK 524
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S +A+++F++M+ G+ PN VT+ +++A S + GR IH I+ ++ V
Sbjct: 525 SGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHV 584
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ MY+ S++D+ +VFD ++ R+I+++NA+I GYA + L A++ F + +E
Sbjct: 585 ANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGL 644
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+ T+ ++LNA A SL+ + HS ++K G SD +G+AL+ Y K GS ++
Sbjct: 645 KPDKVTYINMLNA--CANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDA 702
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
VF++ +++ +W AII A+HG + V+ F+ M+ +G++PD +TF+S+L+ C
Sbjct: 703 LLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHA 762
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +GR F SM +D+ I P+ +HY CMVD+LGR G+L+E E L+ +P + +
Sbjct: 763 GLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGA 822
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGACRIHGNV + ER A++ +K++P + YV +S++YA G W+ A LRK M+ +GV
Sbjct: 823 LLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGV 882
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
KE G SW +VG D LH F + D +HP SE+IY + L MK
Sbjct: 883 TKEPGRSWIEVG--DKLHYFVAEDRSHPESEKIYAELDKLTHAMK 925
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/571 (28%), Positives = 304/571 (53%), Gaps = 25/571 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPD--IVSWNTVLSGFEKS---DDALSFALRMNLIGVVF 55
+NMY + G ++A ++N LN+ + + SWN ++ G+ + ++AL M G+
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T LS C G ++H +K L +V V N ++ MY++ G + EAR VF
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D+M K VSW I+ GY G + A +M ++G+ + +++ + +A L
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEI-AFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL 361
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
+ GK +H + G+ + ++VG L+ Y+KC D +VF ++ +R++I+W TMI
Sbjct: 362 KWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 421
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
N E+A ++ +M+ +G+ PN +T++ L++A + GR IH +K F+ +
Sbjct: 422 AEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDI 481
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
SV N LI+MYAR S++D+ +F+++ ++IISW A+I G A++GL A+ F + +
Sbjct: 482 SVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQA 541
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KPN T+ S+LNA + +L G+R H +I+ GL +D V + L++MY GS+
Sbjct: 542 GLKPNRVTYTSILNACSSPA--ALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVK 599
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++++VF+ ++ A+ A+I A H + + F ++ +G++PD +T++++L C
Sbjct: 600 DARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACA 659
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+G + + + +LKD ++ + + +V + G +A + ++ +S
Sbjct: 660 NSGSLEWAKEIHSLVLKDGYLSDTSLG-NALVSTYAKCGSFSDALLVFDKMMKRNVIS-W 717
Query: 530 QSLLGACRIHGN----VEMGERIADALMKME 556
+++G C HG +++ ER MKME
Sbjct: 718 NAIIGGCAQHGRGQDVLQLFER-----MKME 743
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/554 (27%), Positives = 286/554 (51%), Gaps = 26/554 (4%)
Query: 39 DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNAL 98
D A+ + G ++ Y L C++ + + G ++H I++ + Y NAL
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 99 ITMYSRWGRLVEARRVFDEMPNKDSV--SWNAILSGYTQDGDYGVEAILALIEMMRKGLR 156
I MY + G + EAR+V++++ + + SWNA++ GY Q G Y EA+ L EM + GL
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYG-YIEEALKLLREMQQHGLA 241
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
L + S+C LE G++IH ++K V+V N +++ Y+KC +A +V
Sbjct: 242 LGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREV 301
Query: 217 FRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F +M ++V+SWT +I + E A +F++M+ +GV PN +T+I +++A S +
Sbjct: 302 FDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL 361
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
K G+ +H + S+ +V L+ MYA+ S +D +VF++L R++I+WN +I G
Sbjct: 362 KWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 421
Query: 332 AQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
A+ G A + + + +E PN T+ +LNA +L G+ HS ++K G
Sbjct: 422 AEGGNWEEASEIYHQMQREGMMPNKITYVILLNA--CVNPTALHWGREIHSRVVKDGFMF 479
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D V +AL+ MY + GSI +++ +FN+ K +WTA+I LA+ G + F++M+
Sbjct: 480 DISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQ 539
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLG 505
G++P+ +T+ S+L C + GR + +++ D H+ + +V+M
Sbjct: 540 QAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANT------LVNMYS 593
Query: 506 RVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK--MEPAGSGSY 563
G +++A ++ ++ + +++G H + ++ D L + ++P +Y
Sbjct: 594 MCGSVKDARQVFDRMT-QRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKP-DKVTY 651
Query: 564 VLMSNLYAEKGDWE 577
+ M N A G E
Sbjct: 652 INMLNACANSGSLE 665
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/639 (36%), Positives = 366/639 (57%), Gaps = 15/639 (2%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNL-IGVVFDAVTYS 61
K+G + A +F+ + D +SW T++SG+ + +ALS +M + G+ D S
Sbjct: 13 KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILS 72
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
AL C + FG LH VK + V+VG+AL+ MY + G++ E VF EMP +
Sbjct: 73 LALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLR 132
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
+ VSW AI++G + G Y EA+ +M + + D +F+SA AC L G++I
Sbjct: 133 NVVSWTAIIAGLVRAG-YNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREI 191
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----R 236
H ++K G+ V N L + Y+KC ++F M R+V+SWTT+I N
Sbjct: 192 HCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQE 251
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
E+AV F+ MR V PN+ TF +I + ++ G +H I+ + SV N +
Sbjct: 252 ENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSI 311
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNA 355
+ MY++ + + VF LS R+IISW+ +ISGYAQ G A + +E +PN
Sbjct: 312 MAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNE 371
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+ F SVL+ G L+ G++ H+H++ VGL+ + +V SAL++MY K GSI E+ ++F
Sbjct: 372 FAFASVLSVCGNMA--ILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIF 429
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+E + + +WTA+I+ A HG + ++ FK++ G+RPDS+TF++VL C G++
Sbjct: 430 DEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVD 489
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
G H F+S+ K + I PS DHY CM+D+L R GRL +AE ++ +P V +LL A
Sbjct: 490 LGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRA 549
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
CRIHG+V+ G+R A+ +++++P + +++ ++N+YA KG W+ A +RK MKSKGV KE
Sbjct: 550 CRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEP 609
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSE 634
G+SW D + F SGD +HP E IY + + L S+
Sbjct: 610 GWSWIKFK--DRVSAFVSGDRSHPEGEYIYDVLDLLASQ 646
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 226/451 (50%), Gaps = 14/451 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G+ D+ +F + ++VSW +++G ++ +AL++ M + V D
Sbjct: 110 VDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDT 169
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+S+AL C D +G ++H +K G + +V N L TMY++ G+L R+F+
Sbjct: 170 YTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFES 229
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSW I+ Q G A+ A M + + +F + S C +E
Sbjct: 230 MTQRDVVSWTTIIMSNVQIGQEE-NAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEW 288
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR- 236
G+Q+H I+ G +SV N +M+ YSKC A+ VF+ + R++ISW+TMIS
Sbjct: 289 GEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQ 348
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E+A MR +G PN+ F ++ ++++G+ +H + V
Sbjct: 349 GGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMV 408
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LI MY++ S++++ K+FDE I+SW A+I+GYA++G S A+ F + K
Sbjct: 409 QSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGL 468
Query: 352 KPNAYTFGSVLNAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P++ TF +VL A A + L H S + ++ D ++D+ + G + +
Sbjct: 469 RPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHY--GCMIDLLCRAGRLND 526
Query: 411 SQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
++ + ++ + W+ ++ A HGD +
Sbjct: 527 AESMIQSMPFQRDDVVWSTLLRACRIHGDVD 557
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/645 (35%), Positives = 378/645 (58%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+NMY K G ++A +F+ + +VSW + G+ +S+ A +M GVV +
Sbjct: 168 LNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNR 227
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+TY + L+ +G +HS I+ G +S+ VG AL+ MY++ G + R+VF++
Sbjct: 228 ITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEK 287
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ N+D ++WN ++ G +G Y EA +M R+G+ + +++ +AC + L
Sbjct: 288 LVNRDLIAWNTMIGGLA-EGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHW 346
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GK+IH K G+ + + V N L+S YS+C DA VF +M ++VISWT MI
Sbjct: 347 GKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAK 406
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S +A+++++EM+ GV PN VT+ +++A S ++ GR IH ++ ++ V
Sbjct: 407 SGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHV 466
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ MY+ S++D+ +VFD + R+I+++NA+I GYA + L A++ F + +E
Sbjct: 467 GNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGL 526
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+ T+ ++LNA A SL+ + H+ + K G SD VG+AL+ Y K GS ++
Sbjct: 527 KPDKVTYINMLNA--CANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDA 584
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
VF + +++ +W AII A+HG + + F+ M+ +GV+PD +TF+S+L+ C
Sbjct: 585 SIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHA 644
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +GR F SM +D+ I P+ +HY CMVD+LGR G+L+EAE L+ +P + +
Sbjct: 645 GLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGA 704
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGACRIHGNV + ER A++ +K++ + YV +S++YA G W+ A LRK M+ +GV
Sbjct: 705 LLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGV 764
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
KE G SW VG D LH F + D +HP+SE+IY + L MK
Sbjct: 765 TKEPGRSWIQVG--DKLHYFVAEDRSHPQSEKIYAELDRLTHAMK 807
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 265/491 (53%), Gaps = 14/491 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLN--NPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVF 55
+NMY + G ++A ++ L+ + SWN ++ G+ + + AL +M G+
Sbjct: 65 INMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAP 124
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T + LS C +G ++H ++ GL +V V N ++ MY++ G + EAR VF
Sbjct: 125 DRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVF 184
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D+M K VSW + GY D A +M ++G+ + +++ S +A L
Sbjct: 185 DKMEKKSVVSWTITIGGYA-DCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAAL 243
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
+ GK +H + G+ + +VG L+ Y+KC D +VF ++ +R++I+W TMI
Sbjct: 244 KWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 303
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E+A ++ +M+ +GV PN +T++ L++A + G+ IH K F S+
Sbjct: 304 AEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDI 363
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N LI+MY+R S++D+ VFD++ +++ISW A+I G A++G A+ + + +
Sbjct: 364 GVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQA 423
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+PN T+ S+LNA + +L+ G+R H +++ GL +D VG+ L++MY GS+
Sbjct: 424 GVEPNRVTYTSILNACSSPA--ALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVK 481
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++++VF+ ++ A+ A+I A H + + F ++ +G++PD +T++++L C
Sbjct: 482 DARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACA 541
Query: 470 RNGMIHKGRHL 480
+G + R +
Sbjct: 542 NSGSLEWAREI 552
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/568 (28%), Positives = 290/568 (51%), Gaps = 30/568 (5%)
Query: 37 KSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGN 96
+ D A+ + G ++ Y L C++ + + G Q+H I++ + Y N
Sbjct: 3 EKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVN 62
Query: 97 ALITMYSRWGRLVEARRVFDEMPNKDSV--SWNAILSGYTQDGDYGVEAILALIEMMRKG 154
ALI MY + G + EAR+V+ ++ + SWNA++ GY Q G Y +A+ L +M + G
Sbjct: 63 ALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYG-YIEKALKLLRQMQQHG 121
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
L D + S S+C LE G++IH +++ G V V N +++ Y+KC +A
Sbjct: 122 LAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAR 181
Query: 215 KVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN 269
+VF +M ++V+SWT I E A +F++M +GV PN +T+I +++A S
Sbjct: 182 EVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPA 241
Query: 270 LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALIS 329
+K G+ +H + S+ +V L+ MYA+ S +D +VF++L R++I+WN +I
Sbjct: 242 ALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIG 301
Query: 330 GYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
G A+ G A + + + +E PN T+ +LNA +L G+ HS + K G
Sbjct: 302 GLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNA--CVNSAALHWGKEIHSRVAKAGF 359
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
SD V +AL+ MY + GSI +++ VF++ K +WTA+I LA+ G + ++E
Sbjct: 360 TSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQE 419
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDM 503
M+ GV P+ +T+ S+L C + GR + +++ D H+ + +V+M
Sbjct: 420 MQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNT------LVNM 473
Query: 504 LGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK--MEPAGSG 561
G +++A ++ ++ + +++G H + ++ D L + ++P
Sbjct: 474 YSMCGSVKDARQVFDRMI-QRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKP-DKV 531
Query: 562 SYVLMSNLYAEKG--DW--EMVAILRKG 585
+Y+ M N A G +W E+ ++RKG
Sbjct: 532 TYINMLNACANSGSLEWAREIHTLVRKG 559
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/647 (35%), Positives = 382/647 (59%), Gaps = 20/647 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K+ + +F+ + ++VSW ++L+G+ + +M GV+ +
Sbjct: 135 VDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNR 194
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T ST ++ L +EG + GLQ+H+++VK G + + V N+LI++YSR G L +AR VFD
Sbjct: 195 YTVSTVIA-ALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFD 253
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+M +D V+WN++++GY ++G +E +M G++ H++F S +C + L
Sbjct: 254 KMEIRDWVTWNSMIAGYVRNGQ-DLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELA 312
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMISM- 234
L K + ++K G+ T V LM SKC+ DA +F M + +NV+SWT MIS
Sbjct: 313 LVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGC 372
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ AV+LF +MR +GV PN T+ ++ + V E +H IKTN+
Sbjct: 373 LQNGGNDQAVNLFSQMRREGVKPNHFTYSAIL-TVHYPVFVSE---MHAEVIKTNYERSS 428
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
SV L+ Y + + D+ KVF+ + +++++W+A+++GYAQ G + A + F +IKE
Sbjct: 429 SVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKE 488
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KPN +TF SV+NA A+ + + G++ H++ IK+ L++ V SAL+ MY KRG+I
Sbjct: 489 GIKPNEFTFSSVINAC-ASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNID 547
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ VF +E+ +W ++IS ++HG + + F EM+ + + D++TF+ V+T C
Sbjct: 548 SAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACT 607
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ KG+ F+SM+ D+HI P+ HYSCM+D+ R G LE+A ++ ++P PG +V
Sbjct: 608 HAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVW 667
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LLGA R+H NVE+GE A+ L+ ++P S +YVL+SN+YA G+W+ +RK M +
Sbjct: 668 RTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKR 727
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V+KE G+SW +V + + F +GD THP S +IY L +K
Sbjct: 728 KVKKEPGYSWIEVK--NKTYSFLAGDLTHPLSNQIYSKLSELSIRLK 772
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 260/529 (49%), Gaps = 21/529 (3%)
Query: 36 EKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVG 95
+++ +AL+ + + + D T S + C G Q+H VKFGL V VG
Sbjct: 72 KQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVG 131
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
+L+ MY + + + RRVFDEM ++ VSW ++L+GY+ +G YG L +M +G+
Sbjct: 132 TSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWEL-FCQMQYEGV 190
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
+ + ++ +A +E + +G Q+H + +K G+ + V N L+S YS+ + DA
Sbjct: 191 LPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARD 250
Query: 216 VFRRMHDRNVISWTTMIS---MNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
VF +M R+ ++W +MI+ N +D +F +M+L GV P +TF +I + +
Sbjct: 251 VFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRE 310
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL-SCREIISWNALIS 329
+ +++ +K+ F ++ V L+ ++ + M D+ +F + + ++SW A+IS
Sbjct: 311 LALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMIS 370
Query: 330 GYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIK 385
G QNG + AV F + +E KPN +T+ ++L V +E H+ +IK
Sbjct: 371 GCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSE---------MHAEVIK 421
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
+ VG+ALLD Y K G+ ++ +VF + K AW+A+++ A+ G+ E
Sbjct: 422 TNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKL 481
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLG 505
F ++ +G++P+ TF SV+ C + F + + + S +V M
Sbjct: 482 FHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYA 541
Query: 506 RVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
+ G ++ A E+ + L S++ HG + + D + K
Sbjct: 542 KRGNIDSAHEVFKR-QKERDLVSWNSMISGYSQHGQAKKALEVFDEMQK 589
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 199/366 (54%), Gaps = 12/366 (3%)
Query: 111 ARRVFDEMPNKDSV--SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASA 168
A +FD++P++ + N +L Y++D EA+ + ++ L+ D + + +
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTK-EALNLFVSLLHSSLQPDESTLSCVFNI 102
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C + +LG+Q+H +K G HVSVG L+ Y K E D +VF M +RNV+SW
Sbjct: 103 CAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSW 162
Query: 229 TTMISMNREDAV-----SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
T++++ + + LF +M+ +GV PN T +I A+ +V G +H + +K
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK 222
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
F V N LI++Y+R ++D+ VFD++ R+ ++WN++I+GY +NG L +
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEI 282
Query: 344 FFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
F + + KP TF SV+ + + +++L +C + +K G +D IV +AL+
Sbjct: 283 FNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKA--LKSGFTTDQIVITALMVAL 340
Query: 403 GKRGSIFESQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
K + ++ +F+ +E K+ +WTA+IS ++G + +N F +M +GV+P+ T+
Sbjct: 341 SKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTY 400
Query: 462 LSVLTV 467
++LTV
Sbjct: 401 SAILTV 406
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/649 (34%), Positives = 378/649 (58%), Gaps = 24/649 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K+G +F+ + + D+VSWN++L+G+ +D M + G D
Sbjct: 144 VDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDY 203
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ST ++ + G+Q+H+L+VK G ++E V N+LI+M S+ G L +AR VFD
Sbjct: 204 YTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDN 263
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M NKDSVSWN++++G+ +G +EA M G + H +F S +C K L L
Sbjct: 264 MENKDSVSWNSMIAGHVINGQ-DLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGL 322
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMISM-- 234
+ +H ++K G T+ +V LM +KC+ DA +F MH ++V+SWT MIS
Sbjct: 323 VRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYL 382
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLI---HAISIGNLVKEGRMIHGLCIKTNFLS 288
+ + AV+LF MR +GV PN T+ ++ HA+ I IH IKTN+
Sbjct: 383 QNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISE-------IHAEVIKTNYEK 435
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
SV L+ + + ++ D+ KVF+ + +++I+W+A+++GYAQ G + A + F +
Sbjct: 436 SSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLT 495
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+E KPN +TF S++NA A S++ G++ H++ IK+ L++ V S+L+ +Y KRG+
Sbjct: 496 REGIKPNEFTFCSIINAC-TAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGN 554
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I + +F +E+ +W ++IS A+HG + + F+EM+ + + D+ITF+ V++
Sbjct: 555 IESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISA 614
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ KG++ F+ M+ D+HI P+ +HYSCM+D+ R G L +A +++ +P P +
Sbjct: 615 CAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAAT 674
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V + +L A R+H N+E+G+ A+ ++ +EP S +YVL+SN+YA G+W +RK M
Sbjct: 675 VWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMD 734
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ V+KE G+SW +V + + F +GD +HP S+ IY L + ++
Sbjct: 735 KRRVKKEPGYSWIEVK--NKTYSFLAGDLSHPLSDHIYSKLSELNTRLR 781
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 267/513 (52%), Gaps = 21/513 (4%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ D+ N +L + + D +AL + + G+ D+ T S LS C
Sbjct: 58 LFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFN 117
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G Q+H VK GL + VGN+L+ MY++ G + + RRVFDEM ++D VSWN++L+G
Sbjct: 118 GTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTG 177
Query: 133 YTQDG-DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
Y+ + + V + L+++ +G R D+ + ++ +A ++ + +G QIH + +K+G+
Sbjct: 178 YSWNRFNDQVWELFCLMQV--EGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFE 235
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEM 246
T V N L+S SK + DA VF M +++ +SW +MI+ +N +D A F M
Sbjct: 236 TERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNM 295
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+L G P TF +I + + + R++H +K+ + +V L+ + + +
Sbjct: 296 QLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEI 355
Query: 307 QDSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
D+ +F + + ++SW A+ISGY QNG + AV F + +E KPN +T+ ++L
Sbjct: 356 DDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL-T 414
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
V A IS H+ +IK + VG+ALLD + K G+I ++ +VF + K
Sbjct: 415 VQHAVFIS-----EIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVI 469
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC-GRNGMIHKGRHLFDS 483
AW+A+++ A+ G+ E F ++ +G++P+ TF S++ C + +G+
Sbjct: 470 AWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAY 529
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+K + + S +V + + G +E A E+
Sbjct: 530 AIK-LRLNNALCVSSSLVTLYAKRGNIESAHEI 561
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/648 (34%), Positives = 372/648 (57%), Gaps = 18/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y K F +F+ + ++V+W T++SG+ ++ ++ L+ +RM G ++
Sbjct: 139 VDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNS 198
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ AL + GLQ+H+++VK GLD + V N+LI +Y + G + +AR +FD+
Sbjct: 199 FTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK 258
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
K V+WN+++SGY +G +EA+ M +RL SF S C + K L
Sbjct: 259 TEVKSVVTWNSMISGYAANG-LDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRF 317
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMISM-- 234
+Q+H +K G+ ++ LM YSKC DA ++F+ NV+SWT MIS
Sbjct: 318 TEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFL 377
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+E+AV LF EM+ GV PN+ T+ ++ A+ + + + +H +KTN+ +
Sbjct: 378 QNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSST 433
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+ Y + + ++ KVF + ++I++W+A+++GYAQ G + AA++ F + K
Sbjct: 434 VGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGG 493
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN +TF S+LN V AA S+ G++ H IK LDS V SALL MY K+G I
Sbjct: 494 VKPNEFTFSSILN-VCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIES 552
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF +EK +W ++IS A+HG ++ FKEM+ + V+ DS+TF+ V C
Sbjct: 553 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTH 612
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G FD M++D I P+ +H SCMVD+ R G+LE+A +++ +P G ++ +
Sbjct: 613 AGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWR 672
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
++L ACR+H E+G A+ ++ M P S +YVL+SN+YAE GDW+ A +RK M +
Sbjct: 673 TILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERN 732
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
V+KE G+SW +V + + F +GD +HP ++IY E L + +K L
Sbjct: 733 VKKEPGYSWIEVK--NKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDL 778
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 259/529 (48%), Gaps = 23/529 (4%)
Query: 3 MYC----KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVF 55
+YC S + A +F+ + D S+ ++L GF + + +A L + +G+
Sbjct: 36 IYCFGAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEM 95
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D +S+ L LFG QLH +KFG +V VG +L+ Y + + R VF
Sbjct: 96 DCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVF 155
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
DEM ++ V+W ++SGY ++ E + + M +G + + +F +A E
Sbjct: 156 DEMKERNVVTWTTLISGYARNS-LNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVG 214
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
G Q+H V +K G + V N L++ Y KC A +F + ++V++W +MIS
Sbjct: 215 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 274
Query: 234 -MNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
N D A+ +F MRL+ V ++ +F +I + ++ +H +K F+ +
Sbjct: 275 AANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQ 334
Query: 291 SVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
++ L+ Y++ +M D+ ++F E ++SW A+ISG+ QN AV F + +
Sbjct: 335 NIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKR 394
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ +PN +T+ +L A + + H+ ++K + VG+ALLD Y K G +
Sbjct: 395 KGVRPNEFTYSVILTA------LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKV 448
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E+ +VF+ K AW+A+++ A+ G+ E+ + F E+ GV+P+ TF S+L VC
Sbjct: 449 DEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVC 508
Query: 469 -GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ +G+ +K ++ S S ++ M + G +E AEE+
Sbjct: 509 AATTASMGQGKQFHGFAIKS-RLDSSLCVSSALLTMYAKKGHIESAEEV 556
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/647 (35%), Positives = 365/647 (56%), Gaps = 14/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ +Y G ++A +F+ +N +VSWN ++SG+ + +A + M + D
Sbjct: 70 LKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDK 129
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + LS C +G ++H +++ GL ++ VGNALI+MY++ G + +ARRVFD
Sbjct: 130 FTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDA 189
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++D VSW + Y + G YG E++ M+++ +R +++ + SACG LE
Sbjct: 190 MASRDEVSWTTLTGAYAESG-YGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEK 248
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GKQIH ++ Y + V V L Y KC DA +VF + R+VI+W TMI
Sbjct: 249 GKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVD 308
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S E+A F M +GV P+ T+ ++ A + + G+ IH K +S+
Sbjct: 309 SGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRF 368
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI MY++ SM+D+ +VFD + R+++SW L+ YA + + F ++++
Sbjct: 369 GNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGV 428
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
K N T+ VL A + ++LK G+ H+ ++K GL +D V +AL+ MY K GS+ ++
Sbjct: 429 KANKITYMCVLKA--CSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDA 486
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
RVF + W +I L ++G + +++ M+++G+RP++ TF++VL+ C
Sbjct: 487 IRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVC 546
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
++ +GR F M KDY I P+ HY+CMVD+L R G L EAE+++ IP P ++ +
Sbjct: 547 NLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGA 606
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACRIH NVE+GER A+ +K+EP +G YV +S +YA G W VA LRK MK +GV
Sbjct: 607 LLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGV 666
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+KE G SW ++ +H F + D +HPR++EIY E L +MK L
Sbjct: 667 KKEPGRSWIEIA--GEVHSFVARDQSHPRTQEIYAELETLKKQMKSL 711
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 241/462 (52%), Gaps = 18/462 (3%)
Query: 34 GFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVY 93
G+ D L + R G D+ Y L C+ + G Q+H I++ G+ VY
Sbjct: 8 GWYAPADVLQYLHRK---GPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVY 64
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+ N L+ +Y+ G + EAR++FD+ NK VSWN ++SGY G EA M ++
Sbjct: 65 ITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRG-LAQEAFNLFTLMQQE 123
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
L D +F S SAC L G++IH ++ G +VGN L+S Y+KC DA
Sbjct: 124 RLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDA 183
Query: 214 NKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
+VF M R+ +SWTT+ S E+++ + M + V P+ +T++ ++ A
Sbjct: 184 RRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSL 243
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+++G+ IH +++ + S+ V L MY + + +D+ +VF+ LS R++I+WN +I
Sbjct: 244 AALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMI 303
Query: 329 SGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
G+ +G A F +++E P+ T+ +VL+A A L G+ H+ K G
Sbjct: 304 RGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSA--CARPGGLARGKEIHARAAKDG 361
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM---N 444
L SD G+AL++MY K GS+ ++++VF+ ++ +WT + L R+ D + V+
Sbjct: 362 LVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTL---LGRYADCDQVVESFT 418
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
FK+M +GV+ + IT++ VL C + G+ + ++K
Sbjct: 419 TFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVK 460
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 211/393 (53%), Gaps = 11/393 (2%)
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
+DG Y +L + RKG ++D + +C K+L +GKQ+H ++ G +V
Sbjct: 6 KDGWYAPADVLQYLH--RKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNV 63
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNR---EDAVSLFKEMRLD 249
+ N L+ Y+ C +A ++F + +++V+SW MIS +R ++A +LF M+ +
Sbjct: 64 YITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQE 123
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
+ P+ TF+ ++ A S ++ GR IH ++ ++ +V N LI+MYA+ S++D+
Sbjct: 124 RLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDA 183
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
+VFD ++ R+ +SW L YA++G +++ + +++E +P+ T+ +VL+A G+
Sbjct: 184 RRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSL 243
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+L+ G++ H+HI++ SD V +AL MY K G+ +++ VF + AW
Sbjct: 244 A--ALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNT 301
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+I G E F M +GV PD T+ +VL+ C R G + +G+ + KD
Sbjct: 302 MIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDG 361
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ + +++M + G +++A ++ ++P
Sbjct: 362 LVS-DVRFGNALINMYSKAGSMKDARQVFDRMP 393
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/639 (37%), Positives = 362/639 (56%), Gaps = 24/639 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G+ + A +F+ LN ++V WN +L G+ + +++ + M G D
Sbjct: 369 VSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDD 428
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TYS+ LS C + G QLHS+I+K S ++VGNAL+ MY++ G L +AR+ F+
Sbjct: 429 FTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFEL 488
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ N+D+VSWN I+ GY Q+ D VEA M G+ D VS S SAC + LE
Sbjct: 489 IRNRDNVSWNVIIVGYVQEED-EVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQ 547
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+H +S+K G T + G+ L+ Y+KC A+K+ M +R+V+S +I+
Sbjct: 548 GKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQ 607
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF-LSEPSV 292
+N E AV+LF++M ++G+ ++TF L+ A + GR IH L +K L + +
Sbjct: 608 INLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFL 667
Query: 293 CNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
L+ MY D+ +F E S + + W A+ISG +QN S+ A+Q + KE
Sbjct: 668 GVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLY----KEM 723
Query: 352 K-----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ P+ TF S L A S+K G HS I G DSD + SAL+DMY K G
Sbjct: 724 RSCNVLPDQATFVSALRACAVVS--SIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCG 781
Query: 407 SIFESQRVFNE-TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
+ S +VF E +++K +W ++I A++G E + F EM+ V PD +TFL VL
Sbjct: 782 DVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVL 841
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
T C +G + +GR +FD M+ Y ++P DH +CMVD+LGR G L+EAEE + ++ P
Sbjct: 842 TACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPD 901
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
V ++LGACRIHG+ G++ A+ L+++EP S YVL+SN+YA G+W+ V LR+
Sbjct: 902 AKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRRE 961
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
M+ KGV+K G SW VG + F +GD +H + EI
Sbjct: 962 MREKGVKKLPGCSWIVVGQETNM--FVAGDKSHHSASEI 998
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 291/565 (51%), Gaps = 20/565 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+N Y G+ D A +F+ + N ++V+WN ++SG K +A+ F M G+
Sbjct: 268 INAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTR 327
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + LS FGL +H+ +K GL S VYVG++L++MY++ G++ A++VFD
Sbjct: 328 STLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDT 387
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ V WNA+L GY Q+G Y E + M G D +++S SAC K L+L
Sbjct: 388 LNEQNVVLWNAMLGGYVQNG-YANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDL 446
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--SMN 235
G Q+H V IK + +++ VGN L+ Y+K DA + F + +R+ +SW +I +
Sbjct: 447 GHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQ 506
Query: 236 REDAVS---LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
ED V LF+ M L G+ P++V+ ++ A + +++G+ +H L +KT ++
Sbjct: 507 EEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYS 566
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LI MYA+ ++ + K+ + R ++S NALI+GYAQ L AV F ++ E
Sbjct: 567 GSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLE-QAVNLFRDMLVEGI 625
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD-SDPIVGSALLDMYGKRGSIFE 410
TF S+L+A + ++L G++ HS I+K+GL D +G +LL MY +
Sbjct: 626 NSTEITFASLLDACHEQQKLNL--GRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTD 683
Query: 411 SQRVFNE-TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ +F+E + KS WTA+IS L+++ + +KEM + V PD TF+S L C
Sbjct: 684 ASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACA 743
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
I G + +H D S +VDM + G ++ + ++ ++ +
Sbjct: 744 VVSSIKDGTETHSLI---FHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVI 800
Query: 528 VLQSLLGACRIHGNVEMGERIADAL 552
S++ +G E R+ D +
Sbjct: 801 SWNSMIVGFAKNGYAEDALRVFDEM 825
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 254/530 (47%), Gaps = 48/530 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+++Y K D A F L + DI++WN++LS K L+ GV +
Sbjct: 101 VDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNE 160
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ LS C E G Q+H +VK G +S Y ALI MY++ L +AR +FD
Sbjct: 161 FTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDG 220
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
D VSW +++ GY + G EA+ EM + G D V+F + +A
Sbjct: 221 AVELDKVSWTSMIGGYIKVG-LPEEAVKVFQEMEKVGQEPDQVAFVTVINA--------- 270
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
+V +G + +A+ +F RM +RNV++W MIS + +
Sbjct: 271 ---------------YVDLGRL-----------DNASDLFSRMPNRNVVAWNLMISGHAK 304
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ F+ MR G+ T ++ AI+ + G ++H +K S V
Sbjct: 305 GGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYV 364
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ L++MYA+ M+ ++KVFD L+ + ++ WNA++ GY QNG + ++ FF +
Sbjct: 365 GSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGF 424
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P+ +T+ S+L+A + + L G + HS IIK S+ VG+AL+DMY K G++ ++
Sbjct: 425 YPDDFTYSSILSACACLKYLDL--GHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDA 482
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
++ F + + +W II + D + F+ M G+ PD ++ S+L+ C
Sbjct: 483 RQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASV 542
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +G+ + +K E S ++DM + G ++ A +++ +P
Sbjct: 543 RGLEQGKQVHCLSVKTGQ-ETKLYSGSSLIDMYAKCGAIDSAHKILACMP 591
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 214/444 (48%), Gaps = 47/444 (10%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG- 137
+H+ +K G S+ +GN ++ +Y++ + A R F ++ +KD ++WN+ILS +++ G
Sbjct: 81 IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF 140
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ V L + G+ + +F S+C + ++ G+Q+H +KMG+ +
Sbjct: 141 PHLVVKYFGL--LWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVC 252
L+ Y+KC DA +F + + +SWT+MI E+AV +F+EM G
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQE 258
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ V F+ +I+A Y + ++ +
Sbjct: 259 PDQVAFVTVINA-----------------------------------YVDLGRLDNASDL 283
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
F + R +++WN +ISG+A+ G + A++ F + K K T GSVL+A+ +
Sbjct: 284 FSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLA-- 341
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
+L G H+ +K GL S+ VGS+L+ MY K G + +++VF+ E++ W A++
Sbjct: 342 ALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLG 401
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
++G VM F M++ G PD T+ S+L+ C + G L ++K+
Sbjct: 402 GYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKN-KFA 460
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEE 515
+ + +VDM + G LE+A +
Sbjct: 461 SNLFVGNALVDMYAKSGALEDARQ 484
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 152/343 (44%), Gaps = 42/343 (12%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED 238
K IH S+K+G+ + +GNV++ Y+KC A + F+++ D+++++W +++SM+ +
Sbjct: 79 KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138
Query: 239 -----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
V F + GV PN+ TF ++ + + +VK GR +H +K F S
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
LI MYA+ + D+ +FD + +SW ++I GY + GL AV+ F
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVF--------- 249
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ KVG + D + +++ Y G + +
Sbjct: 250 ---------------------------QEMEKVGQEPDQVAFVTVINAYVDLGRLDNASD 282
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F+ ++ AW +IS A+ G + F+ M G++ T SVL+
Sbjct: 283 LFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAA 342
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ G + LK + + S +V M + G++E A+++
Sbjct: 343 LDFGLLVHAEALKQ-GLHSNVYVGSSLVSMYAKCGKMEAAKKV 384
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/620 (38%), Positives = 350/620 (56%), Gaps = 17/620 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMY K + D A +FN+L +IV WN +L GF + + + + F M G D
Sbjct: 351 VNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDE 410
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ S C FG QLH++++K S ++V NAL+ MY++ G L EAR+ F+
Sbjct: 411 FTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEF 470
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D+VSWNAI+ GY Q+ +Y EA M+ G+ D VS S SAC + K +
Sbjct: 471 MKIHDNVSWNAIIVGYVQE-EYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQ 529
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+Q H + +K+G T G+ L+ Y KC V A VF M RNV+S +I+
Sbjct: 530 GQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTM 589
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS-V 292
+ E+A+ LF+E+++ G+ P +VTF GL+ ++ GR IHG +K FLS V
Sbjct: 590 SHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMV 649
Query: 293 CNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
C L+ MY + DSE +F EL + ++ W ALISGYAQ A+Q F+ ++
Sbjct: 650 CVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQ-FYQHMRSD 708
Query: 352 K--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ TF SVL A SL+ GQ HS I G + D I S+L+DMY K G +
Sbjct: 709 NILPDQATFASVLRACAGMS--SLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVK 766
Query: 410 ESQRVFNETQEK-SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S +VF+E + S +W ++I LA++G E + FK+ME + + PD +TFL VL+ C
Sbjct: 767 GSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSAC 826
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G + +GR +FD M+ +Y ++P DH CMVD+LGR G L EAEE + ++ +
Sbjct: 827 SHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPML 886
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LLGACR HG+ G+R A+ LM+++P S SYVL+S LYAE +W LR+ MK
Sbjct: 887 WSTLLGACRKHGDEVRGKRAANKLMELKPQSSSSYVLLSGLYAESENWSGADSLRREMKL 946
Query: 589 KGVRKEVGFSWADVG-DIDG 607
KGV+K G+SW + G D+ G
Sbjct: 947 KGVKKLPGYSWIEPGRDVQG 966
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 269/534 (50%), Gaps = 20/534 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+N Y G+ A +F + NP++V+WN ++SG K +++A+SF L + G+
Sbjct: 250 INAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATR 309
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + LS +G +H+ +K GLD VYVG+AL+ MY++ ++ A++VF+
Sbjct: 310 SSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNS 369
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ V WNA+L G+ Q+G E + M R G + D +FTS SAC L+
Sbjct: 370 LGERNIVLWNAMLGGFAQNG-LAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDF 428
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G Q+H V IK + +++ V N L+ Y+K +A K F M + +SW +I
Sbjct: 429 GGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQ 488
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++A +F+ M +GV P++V+ ++ A + K+G+ H L +K +
Sbjct: 489 EEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCA 548
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
+ LI MY + + + VF + R ++S NALI+GY + L A+ F + +
Sbjct: 549 GSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHLE-EAIHLFQEIQMVGL 607
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFE 410
KP TF +L+ A ++L G++ H ++K G L S +V +LL MY +
Sbjct: 608 KPTEVTFAGLLDGCDGAFMLNL--GRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFAD 665
Query: 411 SQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
S+ +F+E Q K WTA+IS A+ +E + ++ M + + PD TF SVL C
Sbjct: 666 SETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACA 725
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIP 521
+ G+ + + +H + D +C ++DM + G ++ + ++ ++P
Sbjct: 726 GMSSLQTGQEVHSLI---FHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMP 776
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 143/533 (26%), Positives = 255/533 (47%), Gaps = 54/533 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI-----GVVF 55
+++Y K G D A F+ L D+ +WN+VLS + D L + + + GV
Sbjct: 83 VDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMY--LDHGLFATVVQSFVCMWNHGVRP 140
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T++ LS C + +G Q+H + K G + LI MY++ L +AR VF
Sbjct: 141 NEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVF 200
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D N D+VSW +++GY +DG + +EA+ +M R G D ++ + +A
Sbjct: 201 DGALNLDTVSWTTLIAGYVRDG-FPMEAVKVFDKMQRVGHVPDQIALVTVINA------- 252
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+V++G + DA K+F ++ + NV++W MIS +
Sbjct: 253 -----------------YVALGRL-----------ADARKLFTQIPNPNVVAWNVMISGH 284
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E+A+S F E++ G+ + ++ AI+ +++ G M+H IK
Sbjct: 285 AKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNV 344
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + L+ MYA+ M +++VF+ L R I+ WNA++ G+AQNGL+ V FF +K
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLA-QEVMEFFSYMKR 403
Query: 351 --SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+P+ +TF S+ +A + L G + H+ +IK S+ V +AL+DMY K G++
Sbjct: 404 HGPQPDEFTFTSIFSACASLH--YLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGAL 461
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E+++ F + +W AII + + F+ M + GV PD ++ S+++ C
Sbjct: 462 KEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSAC 521
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+G+ +L ++ S S ++DM + G + A ++ +P
Sbjct: 522 ANVKEFKQGQQC-HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMP 573
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 211/443 (47%), Gaps = 45/443 (10%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+HS +K G+ + +GN ++ +Y + G + A++ F + KD +WN++LS Y G
Sbjct: 63 IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+ + + + M G+R + +F SAC +++ GKQ+H KMG+G
Sbjct: 123 FAT-VVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQG 181
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCP 253
L+ Y+KC DA VF + + +SWTT+I+ D AV +F +M+ G P
Sbjct: 182 GLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVP 241
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+ + + +I+A Y + D+ K+F
Sbjct: 242 DQIALVTVINA-----------------------------------YVALGRLADARKLF 266
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
++ +++WN +ISG+A+ G + A+ F + K K + GSVL+A+ +
Sbjct: 267 TQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS--M 324
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L +G H+ IK GLD + VGSAL++MY K + +++VFN E++ W A++
Sbjct: 325 LNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGG 384
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
A++G + VM F M+ G +PD TF S+ + C + G L M+K+
Sbjct: 385 FAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKN-KFTS 443
Query: 493 SPDHYSCMVDMLGRVGRLEEAEE 515
+ + +VDM + G L+EA +
Sbjct: 444 NLFVANALVDMYAKSGALKEARK 466
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 162/365 (44%), Gaps = 43/365 (11%)
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L K IH S+K+G G +GNV++ Y KC A K F R+ ++V +W +++SM
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116
Query: 235 NRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ V F M GV PN+ TF ++ A S + G+ +H K F
Sbjct: 117 YLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFR 176
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
LI MYA+ +++D+ VFD + +SW LI+GY ++G + AV+ F
Sbjct: 177 SFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVF----- 231
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ +VG D I +++ Y G +
Sbjct: 232 -------------------------------DKMQRVGHVPDQIALVTVINAYVALGRLA 260
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++++F + + AW +IS A+ G E ++ F E++ G++ + SVL+
Sbjct: 261 DARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIA 320
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
M++ G + +K+ ++ + S +V+M + +++ A+++ + G + +
Sbjct: 321 SLSMLNYGSMVHAQAIKE-GLDDNVYVGSALVNMYAKCSKMDAAKQVFNSL-GERNIVLW 378
Query: 530 QSLLG 534
++LG
Sbjct: 379 NAMLG 383
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP A VL A+ A+ I HS +K+G+ ++G+ ++D+Y K G++ +
Sbjct: 49 KPKA-----VLQALSTAKVI--------HSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFA 95
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
Q+ F+ ++K FAW +++S HG + +V+ F M N GVRP+ TF VL+ C
Sbjct: 96 QKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGL 155
Query: 472 GMIHKGRHLFDSMLK 486
I+ G+ + + K
Sbjct: 156 QDINYGKQVHCGVFK 170
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/646 (35%), Positives = 361/646 (55%), Gaps = 15/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIG-VVFD 56
+ + K+ A +F+ L D VSW ++SG+ S D AL +M L + D
Sbjct: 56 LKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
S L C +L+G LH VK GL + V+VG+AL+ MY + G + + +VFD
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
EMP +++V+W A+++G + G Y + M R + D ++ A A L
Sbjct: 176 EMPTRNAVTWTAVITGLVRAG-YSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALN 234
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+ IH ++K G+ + V N L + Y+KC FR+M +V+SWTT+++
Sbjct: 235 HGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYI 294
Query: 234 -MNREDA-VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
M +ED + FK MR V PN+ TF +I + +K G +H + F++ S
Sbjct: 295 QMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS 354
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE- 350
V N ++T+Y++ + KVF + R+II+W+ +I+ Y+Q G A + + E
Sbjct: 355 VANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEG 414
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN + SVL+ G+ L+ G++ H+H++ VGL+ +V SAL+ MY K GSI E
Sbjct: 415 PKPNEFALASVLSVCGSMA--ILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAE 472
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ ++F ++ + +WTA+IS A HG + + F+ ++ G+RPDS+TF+ VLT C
Sbjct: 473 ASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSH 532
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
GM+ G + F+SM KDYHI PS +HY CM+D+L R GRL +AE L+ +P V
Sbjct: 533 AGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWS 592
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL ACRIHG+V+ G+R A ++K++P +G+++ ++N++A KG W+ A +R MKSKG
Sbjct: 593 TLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKG 652
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V KE G W+ V D + F SGD +HP+ E+IY + E L S M+
Sbjct: 653 VVKEPG--WSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGME 696
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 204/429 (47%), Gaps = 11/429 (2%)
Query: 95 GNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEM-MRK 153
N + + + L +AR +FD++P +D VSW I+SGY D EA+ +M ++
Sbjct: 52 ANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSD-SSEALRLFSKMRLQS 110
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
LR+D + CG N G +HG S+K G V VG+ L+ Y K G +
Sbjct: 111 ELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRS 170
Query: 214 NKVFRRMHDRNVISWTTMIS-MNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
KVF M RN ++WT +I+ + R E ++ F M V + + + A +
Sbjct: 171 CKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADS 230
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ GR IH +K F V N L TMY + + F ++ +++SW ++
Sbjct: 231 GALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIV 290
Query: 329 SGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
+ Y Q G +QAF + + PN YTF +V++ A LK G++ H+H++ VG
Sbjct: 291 TAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISC--CANFARLKWGEQLHAHVLCVG 348
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+ V ++++ +Y K G + +VF + + W+ II+A ++ G E
Sbjct: 349 FVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLS 408
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
M ++G +P+ SVL+VCG ++ +G+ L +L +E + S ++ M +
Sbjct: 409 RMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVL-SVGLEQTSMVCSALIIMYAKC 467
Query: 508 GRLEEAEEL 516
G + EA ++
Sbjct: 468 GSIAEASKI 476
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/646 (35%), Positives = 361/646 (55%), Gaps = 15/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIG-VVFD 56
+ + K+ A +F+ L D VSW ++SG+ S D AL +M L + D
Sbjct: 56 LKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
S L C +L+G LH VK GL + V+VG+AL+ MY + G + + +VFD
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
EMP +++V+W A+++G + G Y + M R + D ++ A A L
Sbjct: 176 EMPTRNAVTWTAVITGLVRAG-YSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALN 234
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+ IH ++K G+ + V N L + Y+KC FR+M +V+SWTT+++
Sbjct: 235 HGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYI 294
Query: 234 -MNREDA-VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
M +ED + FK MR V PN+ TF +I + +K G +H + F++ S
Sbjct: 295 QMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS 354
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE- 350
V N ++T+Y++ + KVF + R+II+W+ +I+ Y+Q G A + + E
Sbjct: 355 VANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEG 414
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN + SVL+ G+ L+ G++ H+H++ VGL+ +V SAL+ MY K GSI E
Sbjct: 415 PKPNEFALASVLSVCGSMA--ILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAE 472
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ ++F ++ + +WTA+IS A HG + + F+ ++ G+RPDS+TF+ VLT C
Sbjct: 473 ASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSH 532
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
GM+ G + F+SM KDYHI PS +HY CM+D+L R GRL +AE L+ +P V
Sbjct: 533 AGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWS 592
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL ACRIHG+V+ G+R A ++K++P +G+++ ++N++A KG W+ A +R MKSKG
Sbjct: 593 TLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKG 652
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V KE G W+ V D + F SGD +HP+ E+IY + E L S M+
Sbjct: 653 VVKEPG--WSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGME 696
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 204/429 (47%), Gaps = 11/429 (2%)
Query: 95 GNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEM-MRK 153
N + + + L +AR +FD++P +D VSW I+SGY D EA+ +M ++
Sbjct: 52 ANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSD-SSEALRLFSKMRLQS 110
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
LR+D + CG N G +HG S+K G V VG+ L+ Y K G +
Sbjct: 111 ELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRS 170
Query: 214 NKVFRRMHDRNVISWTTMIS-MNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
KVF M RN ++WT +I+ + R E ++ F M V + + + A +
Sbjct: 171 CKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADS 230
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ GR IH +K F V N L TMY + + F ++ +++SW ++
Sbjct: 231 GALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIV 290
Query: 329 SGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
+ Y Q G +QAF + + PN YTF +V++ A LK G++ H+H++ VG
Sbjct: 291 TAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISC--CANFARLKWGEQLHAHVLCVG 348
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+ V ++++ +Y K G + +VF + + W+ II+A ++ G E
Sbjct: 349 FVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLS 408
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
M ++G +P+ SVL+VCG ++ +G+ L +L +E + S ++ M +
Sbjct: 409 RMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVL-SVGLEQTSMVCSALIIMYAKC 467
Query: 508 GRLEEAEEL 516
G + EA ++
Sbjct: 468 GSIAEASKI 476
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/645 (33%), Positives = 376/645 (58%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++++CK G +A +F + + ++T+L G+ ++ DDA+SF RM GV
Sbjct: 116 VSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVV 175
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ L C D+ G ++H ++ G S V+ ++ MY++ + EA ++FD
Sbjct: 176 YNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDR 235
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D V WN I+SGY Q+G +G A+ ++ M +G R D ++ S A +L +
Sbjct: 236 MPERDLVCWNTIISGYAQNG-FGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRI 294
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+ IHG S++ G+ + V+V L+ YSKC G A +F RM + V+SW +MI +
Sbjct: 295 GRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQ 354
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+ +F++M + V +VT +G +HA + V++GR +H L + S+ SV
Sbjct: 355 NGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSV 414
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
N LI+MY++ + + + ++F+ L + ++SWNA+I GYAQNG A+ F + ++
Sbjct: 415 MNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNI 474
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+++T SV+ A+ AE L + H +I+ LD + V +AL+DMY K G++ +
Sbjct: 475 KPDSFTMVSVIPAL--AELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTA 532
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+++F+ E+ W A+I HG ++ + F++M+ + ++P+ +TFL VL+ C +
Sbjct: 533 RKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHS 592
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G F SM KDY +EP+ DHY MVD+LGR RL EA + + ++P P +SV +
Sbjct: 593 GLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGA 652
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
+LGACRIH NVE+GE+ A+ + ++P G +VL++N+YA W+ VA +R M+ KG+
Sbjct: 653 MLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGI 712
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K G W+ V + +H F SG +HP++++IY E LG+ +K
Sbjct: 713 QKTPG--WSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIK 755
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 121/254 (47%), Gaps = 6/254 (2%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+KE L IK SE L++++ +F S+ ++ +VF + + ++ ++ G
Sbjct: 90 MKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKG 149
Query: 331 YAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
YA+N SL +FF ++ +P Y F +L G D L+ G+ H +I G
Sbjct: 150 YARNS-SLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNAD--LRKGKEIHCQLIVNGF 206
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
S+ + +++MY K + E+ ++F+ E+ W IIS A++G ++ +
Sbjct: 207 ASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLR 266
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG 508
M+ +G RPDSIT +S+L G + GR + ++ E + + +VDM + G
Sbjct: 267 MQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRA-GFESFVNVSTALVDMYSKCG 325
Query: 509 RLEEAEELVGQIPG 522
+ A + ++ G
Sbjct: 326 SVGTARLIFDRMTG 339
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/647 (37%), Positives = 363/647 (56%), Gaps = 16/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMY K + + A +F+ L+ ++V WN +L G+ + + + M G D
Sbjct: 391 INMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDE 450
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY++ LS C E G QLHS I+K + ++V N L+ MY++ G L EAR+ F+
Sbjct: 451 FTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEF 510
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ N+D+VSWNAI+ GY Q+ D EA M+ G+ D VS S S C + + LE
Sbjct: 511 IRNRDNVSWNAIIVGYVQEEDED-EAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQ 569
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+Q+H +K G T + G+ L+ Y KC A VF M R+V+S +I+ +
Sbjct: 570 GEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQ 629
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+A+ LF+EM+ +G+ P+++TF L+ A + + GR IH L K L +
Sbjct: 630 NDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFL 689
Query: 294 NC-LITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKE- 350
L+ MY + D++ +F E + I W A+ISG+ QNG S A+Q + + +
Sbjct: 690 GVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNN 749
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
++P+ TF SVL A SL G+ HS I VGLDSD + GSA++DMY K G +
Sbjct: 750 ARPDQATFASVLRACSILA--SLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKS 807
Query: 411 SQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
S +VF E K++ +W ++I A++G E+ + F EM++ +RPD +TFL VLT C
Sbjct: 808 SVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACS 867
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G + +GR +FD M+ Y I P DH +CM+D+LGR G L+EAEE + ++ P +
Sbjct: 868 HAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIW 927
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+LLGACRIHG+ G R A+ L+++EP S YVL+SN+YA G+W+ V +R+ M+ K
Sbjct: 928 ATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREK 987
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G+RK G SW VG L F +GD HP + EI+ + + L + MK
Sbjct: 988 GLRKLPGCSWIVVGQKTNL--FVAGDKFHPSAGEIHALLKDLIALMK 1032
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 166/558 (29%), Positives = 288/558 (51%), Gaps = 20/558 (3%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTAL 64
G+ D A +F + N ++V+WN ++SG K +A+ F M GV T + L
Sbjct: 297 GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVL 356
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
S E +GL +H+ +K GL+S VYVG++LI MY++ ++ A++VFD + ++ V
Sbjct: 357 SAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLV 416
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
WNA+L GY Q+G Y + + EM G D ++TS SAC + LE+G+Q+H
Sbjct: 417 LWNAMLGGYAQNG-YASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSF 475
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDA 239
IK + ++ V N L+ Y+KC +A + F + +R+ +SW +I + ++A
Sbjct: 476 IIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEA 535
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
++F+ M LDG+ P++V+ ++ + +++G +H +K+ + + LI M
Sbjct: 536 FNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDM 595
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
Y + +++ + VF + R ++S NA+I+GYAQN L + A+ F + E P+ TF
Sbjct: 596 YVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEITF 654
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD-PIVGSALLDMYGKRGSIFESQRVFNE 417
S+L+A ++L G++ H I K GL D +G +LL MY ++ +F+E
Sbjct: 655 ASLLDACTGPYKLNL--GRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSE 712
Query: 418 TQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
Q KS WTAIIS ++G E + ++EM RPD TF SVL C +
Sbjct: 713 FQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGD 772
Query: 477 GRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
GR + S++ +H+ D S +VDM + G ++ + ++ ++ + S++
Sbjct: 773 GR-MIHSLI--FHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIV 829
Query: 535 ACRIHGNVEMGERIADAL 552
+G E +I D +
Sbjct: 830 GFAKNGYAENALKIFDEM 847
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 260/531 (48%), Gaps = 50/531 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K G + A FN L DI++WN+VLS + + + + + GV +
Sbjct: 123 VDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQ 182
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY+ LS C G Q+H ++K G + + +LI MYS+ G LV+AR++FD
Sbjct: 183 FTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDA 242
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ + D+VSW A+++GY Q G EA+ +M + GL D V+F + +AC
Sbjct: 243 VVDPDTVSWTAMIAGYVQVG-LPEEALKVFEDMQKLGLVPDQVAFVTVITAC-------- 293
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
V +G + DA +F +M + NV++W MIS + +
Sbjct: 294 ----------------VGLGRL-----------DDACDLFVQMPNTNVVAWNVMISGHVK 326
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ FK M GV T ++ AI+ + G ++H IK S V
Sbjct: 327 RGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYV 386
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
+ LI MYA+ E M+ ++KVFD L R ++ WNA++ GYAQNG + + V F ++
Sbjct: 387 GSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYA-SKVMKLFSEMRGCG 445
Query: 353 --PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ +T+ S+L+A E L+ G++ HS IIK + + V + L+DMY K G++ E
Sbjct: 446 FWPDEFTYTSILSACACLE--CLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEE 503
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+++ F + + +W AII + D + N F+ M G+ PD ++ S+L+ C
Sbjct: 504 ARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCAN 563
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +G + ++K ++ S ++DM + G +E A + +P
Sbjct: 564 LQALEQGEQVHCFLVKS-GLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMP 613
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 226/443 (51%), Gaps = 45/443 (10%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H+ +KFG S+ +G+A++ +Y++ G + A + F+++ +D ++WN++LS Y++ G
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGS 162
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+ I + G+ + ++ S+C +++LGKQ+H IKMG+ +
Sbjct: 163 LE-QVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEG 221
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVCP 253
L+ YSKC DA K+F + D + +SWT MI+ E+A+ +F++M+ G+ P
Sbjct: 222 SLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVP 281
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+ V F+ +I A V GR+ D+ +F
Sbjct: 282 DQVAFVTVITAC-----VGLGRL------------------------------DDACDLF 306
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
++ +++WN +ISG+ + G + A+ F + K K T GSVL+A+ + E +
Sbjct: 307 VQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLE--A 364
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L +G H+ IK GL+S+ VGS+L++MY K + +++VF+ E++ W A++
Sbjct: 365 LNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGG 424
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
A++G VM F EM G PD T+ S+L+ C + GR L ++K ++ E
Sbjct: 425 YAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIK-HNFEY 483
Query: 493 SPDHYSCMVDMLGRVGRLEEAEE 515
+ + +VDM + G LEEA +
Sbjct: 484 NLFVENTLVDMYAKCGALEEARQ 506
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 122/215 (56%), Gaps = 5/215 (2%)
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
+ + IH +K F S+ + + ++ +YA+ +++ + K F++L R+I++WN+++S Y
Sbjct: 98 RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157
Query: 332 AQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
++ G SL V FG ++ PN +T+ VL++ DI L G++ H +IK+G +
Sbjct: 158 SRQG-SLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDL--GKQVHCGVIKMGFE 214
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
+ +L+DMY K GS+ +++++F+ + +WTA+I+ + G E + F++M
Sbjct: 215 FNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDM 274
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+ G+ PD + F++V+T C G + LF M
Sbjct: 275 QKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQM 309
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 41/293 (13%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
K IH ++K G+G+ +G+ ++ Y+KC A K F ++ R++++W +++SM
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ E + F ++ GV PN T+ ++ + + + G+ +H IK F
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
LI MY++ S+ D+ K+FD + + +SW A+I+GY Q GL A++ F
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVF--------- 271
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
ED+ K+GL D + ++ G + ++
Sbjct: 272 ---------------EDMQ------------KLGLVPDQVAFVTVITACVGLGRLDDACD 304
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+F + + AW +IS + G ++ FK M GV+ T SVL+
Sbjct: 305 LFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLS 357
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/640 (35%), Positives = 362/640 (56%), Gaps = 15/640 (2%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLI---GVVFDAVTYS 61
K GQ K+ +F+ + + D +SW T+++G+ + D+ + L N+ G+ D S
Sbjct: 102 KQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMIS 161
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
AL C FG LH VK GL + V+V +ALI MY + G++ + RVF +M +
Sbjct: 162 VALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKR 221
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
+ VSW AI++G G Y +EA+L EM + D +F A A L GK I
Sbjct: 222 NVVSWTAIIAGLVHAG-YNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAI 280
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NR 236
H +IK G+ V N L + Y+KC ++F +M +V+SWTT+I+
Sbjct: 281 HTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEE 340
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
E AV FK MR V PN TF +I A + + K G IHG ++ + SV N +
Sbjct: 341 EHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSI 400
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNA 355
+T+Y++ ++ + VF ++ ++IISW+ +I+ Y+Q G + A + +E KPN
Sbjct: 401 VTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNE 460
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+ SVL+ G+ L+ G++ H+H++ +G+D + +V SAL+ MY K GS+ E+ ++F
Sbjct: 461 FALSSVLSVCGSMA--LLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIF 518
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
N + + +WTA+I+ A HG + +N F+++ + G++PD +TF+ VLT C GM+
Sbjct: 519 NGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVD 578
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
G + F M +Y I PS +HY C++D+L R GRL EAE ++ +P V +LL +
Sbjct: 579 LGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRS 638
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
CR+HG+V+ G A+ L++++P +G+++ ++N+YA KG W+ A +RK MKSKGV KE
Sbjct: 639 CRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKER 698
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
G+SW +V D L+ F +GD HP+SE I + E L + +
Sbjct: 699 GWSWVNVN--DKLNAFVAGDQAHPQSEHITTVLELLSANI 736
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 219/429 (51%), Gaps = 13/429 (3%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEM-MRKG 154
N+ + + G+L ++R +FD+M ++D +SW +++GY D EA++ M ++ G
Sbjct: 94 NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASD-SYEALILFSNMWVQPG 152
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
L+ D + A ACG N+ G+ +HG S+K G V V + L+ Y K
Sbjct: 153 LQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGC 212
Query: 215 KVFRRMHDRNVISWTTMIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
+VF++M RNV+SWT +I+ N E A+ F EM + V + TF + A +
Sbjct: 213 RVFKKMTKRNVVSWTAIIAGLVHAGYNME-ALLYFSEMWISKVGYDSHTFAIALKASADS 271
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+L+ G+ IH IK F V N L TMY + ++F+++ +++SW LI
Sbjct: 272 SLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLI 331
Query: 329 SGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
+ Y Q G AV+AF + K + PN YTF +V++A A K G++ H H++++G
Sbjct: 332 TTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISA--CANLAIAKWGEQIHGHVLRLG 389
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
L V ++++ +Y K G + + VF+ K +W+ II+ ++ G + +
Sbjct: 390 LVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLS 449
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
M +G +P+ SVL+VCG ++ +G+ + +L I+ +S ++ M +
Sbjct: 450 WMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLC-IGIDHEAMVHSALISMYSKC 508
Query: 508 GRLEEAEEL 516
G +EEA ++
Sbjct: 509 GSVEEASKI 517
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 251/529 (47%), Gaps = 55/529 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G+ ++ +F + ++VSW +++G + +AL + M + V +D+
Sbjct: 199 IDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDS 258
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ AL D G +H+ +K G D +V N L TMY++ G+ R+F++
Sbjct: 259 HTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEK 318
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D VSW +++ Y Q G+ A+ A M + + + +F + SAC + +
Sbjct: 319 MKMPDVVSWTTLITTYVQKGEEE-HAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKW 377
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+QIHG +++G +SV N +++ YSK + A+ VF + +++ISW+T+I++ +
Sbjct: 378 GEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQ 437
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG--LCIKTNFLSEP 290
+A MR +G PN+ ++ L+++G+ +H LCI + E
Sbjct: 438 GGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDH--EA 495
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + LI+MY++ S++++ K+F+ + IISW A+I+GYA++G S A+ F +
Sbjct: 496 MVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSV 555
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+ TF VL A H+ ++ +G +
Sbjct: 556 GLKPDYVTFIGVLTACS-------------HAGMVDLGF--------------------Y 582
Query: 410 ESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ NE Q S+ + II L R G + + M D + + ++L C
Sbjct: 583 YFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMP---CYTDDVVWSTLLRSC 639
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVGRLEEAEEL 516
+G + +GR + +L+ ++P S + + ++ GR +EA +
Sbjct: 640 RVHGDVDRGRWTAEQLLR---LDPNSAGTHIALANIYAAKGRWKEAAHI 685
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/649 (33%), Positives = 375/649 (57%), Gaps = 22/649 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMN---LIGVV 54
++++CK +A +F + + V ++T+L G+ K+ DA+ F RM ++ VV
Sbjct: 83 ISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVV 142
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+D ++ L ++ G ++H +++ G S ++ A++ +Y++ ++ +A ++
Sbjct: 143 YD---FTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKM 199
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F+ MP +D VSWN +++GY Q+G + A+ +++M G + D ++ S A K
Sbjct: 200 FERMPQRDLVSWNTVVAGYAQNG-FARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKA 258
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L +G+ IHG + + G+ V+V ++ TY KC A VF+ M RNV+SW TMI
Sbjct: 259 LRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDG 318
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ E+A + F +M +GV P +V+ +G +HA + ++ GR +H L + +
Sbjct: 319 YAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFD 378
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N LI+MY++ + + + VF L + +++WNA+I GYAQNG A+ F +
Sbjct: 379 VSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQS 438
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
KP+++T SV+ A+ D+S+ + + H I+ +D + V +AL+D + K G+
Sbjct: 439 HDIKPDSFTLVSVITALA---DLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGA 495
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I ++++F+ QE+ W A+I +G ++ F EM+N V+P+ ITFLSV+
Sbjct: 496 IQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAA 555
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C +G++ +G + F+SM ++Y +EP+ DHY MVD+LGR GRL++A + + +P PG++
Sbjct: 556 CSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGIT 615
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
VL ++LGACRIH NVE+GE+ AD L ++P G +VL++N+YA W+ VA +R M+
Sbjct: 616 VLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAME 675
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
KG++K G S ++ + +H F SG HP+S+ IY E LG EMK
Sbjct: 676 KKGIQKTPGCSLVELR--NEVHTFYSGSTNHPQSKRIYAYLETLGDEMK 722
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 240/513 (46%), Gaps = 54/513 (10%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+ LI+K G +E LI+++ ++ + EA RVF+ + +K V ++ +L GY ++
Sbjct: 62 QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNS 121
Query: 138 DYGVEAILALIEMMRKGLRLDHV-SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
+ + E MR + V FT G +L G++IHG+ I G+ +++
Sbjct: 122 T--LRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFA 179
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGV 251
+++ Y+KC DA K+F RM R+++SW T+++ ++ AV + +M+ G
Sbjct: 180 MTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQ 239
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ +T + ++ A++ ++ GR IHG + F +V ++ Y + S++ +
Sbjct: 240 KPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARL 299
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAED 370
VF +S R ++SWN +I GYAQNG S A F ++ E +P + L+A D
Sbjct: 300 VFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGD 359
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
L+ G+ H + + + D V ++L+ MY K + + VF + K+ W A+I
Sbjct: 360 --LERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMI 417
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT------------------------ 466
A++G +N F EM++ ++PDS T +SV+T
Sbjct: 418 LGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMD 477
Query: 467 ----VC-------GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
VC + G I R LFD M + + I ++ M+D G G EA +
Sbjct: 478 KNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVIT-----WNAMIDGYGTNGHGREALD 532
Query: 516 LVGQIPGG---PGLSVLQSLLGACRIHGNVEMG 545
L ++ G P S++ AC G VE G
Sbjct: 533 LFNEMQNGSVKPNEITFLSVIAACSHSGLVEEG 565
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 108/212 (50%), Gaps = 5/212 (2%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+KE I L IK F +E LI+++ +F S+ ++ +VF+ + + + ++ ++ G
Sbjct: 57 LKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKG 116
Query: 331 YAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
YA+N AV+ F+ ++ E P Y F +L G E++ L+ G+ H +I G
Sbjct: 117 YAKNSTLRDAVR-FYERMRCDEVMPVVYDFTYLLQLSG--ENLDLRRGREIHGMVITNGF 173
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
S+ +A++++Y K I ++ ++F ++ +W +++ A++G + +
Sbjct: 174 QSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQ 233
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
M+ G +PDSIT +SVL + GR +
Sbjct: 234 MQEAGQKPDSITLVSVLPAVADLKALRIGRSI 265
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 98/230 (42%), Gaps = 11/230 (4%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SLK + IIK G ++ + + L+ ++ K SI E+ RVF + K + + ++
Sbjct: 56 SLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLK 115
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A++ + ++ M V P F +L + G N + +GR + ++ + +
Sbjct: 116 GYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITN-GFQ 174
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
+ + +V++ + ++E+A ++ ++P +S + G + R
Sbjct: 175 SNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAG----YAQNGFARRAVQV 230
Query: 552 LMKMEPAGS--GSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSW 599
+++M+ AG S L+S L A + LR G G GF +
Sbjct: 231 VLQMQEAGQKPDSITLVSVLPAVAD----LKALRIGRSIHGYAFRAGFEY 276
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/647 (34%), Positives = 368/647 (56%), Gaps = 18/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++++C+ G D+A +F ++ V + T+L GF K D AL F +RM V
Sbjct: 76 VSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVV 135
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ L C D G ++H L+VK G +++ L MY++ ++ EAR+VFD
Sbjct: 136 YNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDR 195
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEKNLE 176
MP +D VSWN I++GY+Q+G L ++ +M + L+ ++ S A + +
Sbjct: 196 MPERDLVSWNTIVAGYSQNG--MARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIR 253
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
+GK+IHG +++ G+ + V++ L+ Y+KC A +F M +RNV+SW +MI
Sbjct: 254 IGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYV 313
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEP 290
N ++A+ +F++M +GV P DV+ +G +HA + +G+L + GR IH L ++
Sbjct: 314 QNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDL-ERGRFIHKLSVELELDRNV 372
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
SV N LI+MY + + + + +F +L R I+SWNA+I G+AQNG + A+ F + +
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQAR 432
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+ +T+ SV+ A+ AE H + H +++ LD + V +AL+DMY K G+I
Sbjct: 433 TVKPDTFTYVSVITAI--AELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIM 490
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ +F+ E+ W A+I HG ++ + F+EM+ +RP+ +TFLSV++ C
Sbjct: 491 IARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACS 550
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+G++ G F M ++Y IEPS DHY MVD+LGR GRL EA + + Q+P P ++V
Sbjct: 551 HSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 610
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LGAC+IH NV E++A+ L ++ P G +VL++N+Y WE V +R M +
Sbjct: 611 GAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 670
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G+RK G S ++ + +H F SG HP S++IY E L ++K
Sbjct: 671 GLRKTPGCSMVEIK--NEVHSFFSGSTAHPSSKKIYAFLEKLICQIK 715
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 231/436 (52%), Gaps = 12/436 (2%)
Query: 82 LIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGV 141
LI K GL E L++++ R+G + EA RVF+ + K +V + +L G+ + D
Sbjct: 59 LIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLD- 117
Query: 142 EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLM 201
+A+ + M + +FT CG E L +GK+IHG+ +K G+ + L
Sbjct: 118 KALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDV 256
+ Y+KC +A KVF RM +R+++SW T+++ ++ A+ + M + + P+ +
Sbjct: 178 NMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFI 237
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T + ++ A+S L++ G+ IHG ++ F S ++ L+ MYA+ S++ + +FD +
Sbjct: 238 TIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGM 297
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI-SLK 374
R ++SWN++I Y QN A+ F ++ E KP T SV+ A+ A D+ L+
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKP---TDVSVMGALHACADLGDLE 354
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G+ H +++ LD + V ++L+ MY K + + +F + Q ++ +W A+I A
Sbjct: 355 RGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFA 414
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
++G +N F +M+ + V+PD+ T++SV+T + H + + ++++ ++ +
Sbjct: 415 QNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNC-LDKNV 473
Query: 495 DHYSCMVDMLGRVGRL 510
+ +VDM + G +
Sbjct: 474 FVTTALVDMYAKCGAI 489
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 117/256 (45%), Gaps = 22/256 (8%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+KE R I L K E L++++ R+ S+ ++ +VF+ + + + + ++ G
Sbjct: 50 LKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKG 109
Query: 331 YAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
+A+ L FF ++ E +P Y F +L G ++ L+ G+ H ++K G
Sbjct: 110 FAKVS-DLDKALKFFVRMRDDEVEPVVYNFTYLLKVCG--DEAELRVGKEIHGLLVKSGF 166
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
D + L +MY K + E+++VF+ E+ +W I++ +++G +
Sbjct: 167 SLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNL 226
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHL--------FDSMLKDYHIEPSPDHYSCM 500
M + ++P IT +SVL +I G+ + FDS++ + + +
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLV---------NIATAL 277
Query: 501 VDMLGRVGRLEEAEEL 516
VDM + G L+ A L
Sbjct: 278 VDMYAKCGSLKTARLL 293
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SLK + I K GL + + + L+ ++ + GS+ E+ RVF +K + ++
Sbjct: 49 SLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLK 108
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A+ D + + F M + V P F +L VCG + G+ + ++K
Sbjct: 109 GFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF-- 166
Query: 492 PSPDHYSC--MVDMLGRVGRLEEAEELVGQIP 521
S D ++ + +M + ++ EA ++ ++P
Sbjct: 167 -SLDLFAMTGLENMYAKCRQVHEARKVFDRMP 197
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/646 (34%), Positives = 372/646 (57%), Gaps = 15/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G +A +F ++ D+VS+NT+L + + + L +M+ G+ D
Sbjct: 170 LSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDK 229
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY L G ++H L V+ GL+S++ VG AL+TM R G + A++ F
Sbjct: 230 VTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKG 289
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++D V +NA+++ Q G + VEA M G+ L+ ++ S +AC K LE
Sbjct: 290 IADRDVVVYNALIAALAQHG-HNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEA 348
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MN 235
GK IH + G+ + V +GN L+S Y++C A ++F M R++ISW +I+
Sbjct: 349 GKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYAR 408
Query: 236 RED---AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
RED A+ L+K+M+ +GV P VTF+ L+ A + + +G+MIH +++ S +
Sbjct: 409 REDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHL 468
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ MY R S+ +++ VF+ R++ISWN++I+G+AQ+G A + F + E
Sbjct: 469 ANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEEL 528
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ TF SVL+ E + L G++ H I + GL D +G+AL++MY + GS+ ++
Sbjct: 529 EPDNITFASVLSGCKNPEALEL--GKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDA 586
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP-DSITFLSVLTVCGR 470
+ VF+ Q + +WTA+I A G+ + F +M+N+G RP D TF S+L+ C
Sbjct: 587 RNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNH 646
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G +F SM +Y + P+ +HY C+V +LGR R +EAE L+ Q+P P +V +
Sbjct: 647 AGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWE 706
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGACRIHGN+ + E A+ +K+ Y+L+SN+YA G W+ VA +R+ M+ +G
Sbjct: 707 TLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRG 766
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+RKE G SW +V +I +H F + D +HP + EIY + L EM+
Sbjct: 767 IRKEPGRSWIEVDNI--IHEFIAADRSHPETAEIYAELKRLSVEME 810
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/551 (28%), Positives = 287/551 (52%), Gaps = 18/551 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS-----GFEKSDDALSFALRMNLIGVVF 55
+NMY K A +F + D++SWN+++S GF+K A M G +
Sbjct: 69 INMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKK--AFQLFEEMQNAGFIP 126
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ +TY + L+ C G ++HS I+K G + V N+L++MY + G L AR+VF
Sbjct: 127 NKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVF 186
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ +D VS+N +L Y Q Y E + +M +G+ D V++ + A L
Sbjct: 187 AGISPRDVVSYNTMLGLYAQKA-YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSML 245
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
+ GK+IH ++++ G + + VG L++ +C A + F+ + DR+V+ + +I+
Sbjct: 246 DEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAAL 305
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A + MR DGV N T++ +++A S ++ G++IH + S+
Sbjct: 306 AQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDV 365
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ N LI+MYAR + + ++F + R++ISWNA+I+GYA+ A++ + + E
Sbjct: 366 QIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSE 425
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP TF +L+A A + G+ H I++ G+ S+ + +AL++MY + GS+
Sbjct: 426 GVKPGRVTFLHLLSAC--ANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLM 483
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E+Q VF TQ + +W ++I+ A+HG YE+ F+EM+N+ + PD+ITF SVL+ C
Sbjct: 484 EAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCK 543
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+ G+ + + + ++ + + +++M R G L++A + + +S
Sbjct: 544 NPEALELGKQIH-GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMS-W 601
Query: 530 QSLLGACRIHG 540
+++G C G
Sbjct: 602 TAMIGGCADQG 612
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 256/467 (54%), Gaps = 10/467 (2%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D TY L C ++H+ +V+ G+ ++++ N LI MY + +++A +VF
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
EMP +D +SWN+++S Y Q G + +A EM G + +++ S +AC L
Sbjct: 86 KEMPRRDVISWNSLISCYAQQG-FKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E GK+IH IK GY V N L+S Y KC A +VF + R+V+S+ TM+ +
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204
Query: 236 REDA-----VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A + LF +M +G+ P+ VT+I L+ A + +++ EG+ IH L ++ S+
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI 264
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V L+TM R + +++ F ++ R+++ +NALI+ AQ+G ++ A + ++ + +
Sbjct: 265 RVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSD 324
Query: 351 SKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
N T+ S+LNA ++ +L+ G+ HSHI + G SD +G+AL+ MY + G +
Sbjct: 325 GVALNRTTYLSILNACSTSK--ALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP 382
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++ +F ++ +W AII+ AR D M +K+M+++GV+P +TFL +L+ C
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ G+ + + +L+ I+ + + +++M R G L EA+ +
Sbjct: 443 NSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNV 488
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 191/372 (51%), Gaps = 13/372 (3%)
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
D ++ + C ++ L K+IH ++ G G + + N+L++ Y KC DA++VF
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 218 RRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
+ M R+VISW ++IS ++ A LF+EM+ G PN +T+I ++ A ++
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G+ IH IK + +P V N L++MY + + + +VF +S R+++S+N ++ YA
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 333 QNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
Q + F + E P+ T+ ++L+A L G+R H ++ GL+SD
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPS--MLDEGKRIHKLTVEEGLNSD 263
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
VG+AL+ M + G + +++ F ++ + A+I+ALA+HG Q+ M +
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRS 323
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGR 509
GV + T+LS+L C + + G+ + + +D H S D + ++ M R G
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH---SSDVQIGNALISMYARCGD 380
Query: 510 LEEAEELVGQIP 521
L +A EL +P
Sbjct: 381 LPKARELFYTMP 392
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 151/298 (50%), Gaps = 14/298 (4%)
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
T++ L+ + L+ E + IH ++ + + N LI MY + S+ D+ +VF E
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAF-----FGVIKESKPNAYTFGSVLNAVGAAED 370
+ R++ISWN+LIS YAQ G A Q F G I PN T+ S+L A + +
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFI----PNKITYISILTACYSPAE 143
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
L++G++ HS IIK G DP V ++LL MYGK G + +++VF + ++ ++
Sbjct: 144 --LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTML 201
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
A+ + + F +M ++G+ PD +T++++L M+ +G+ + +++ +
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE-GL 260
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG-NVEMGER 547
+ +V M R G ++ A++ I + V +L+ A HG NVE E+
Sbjct: 261 NSDIRVGTALVTMCVRCGDVDSAKQAFKGI-ADRDVVVYNALIAALAQHGHNVEAFEQ 317
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/640 (35%), Positives = 358/640 (55%), Gaps = 15/640 (2%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLI---GVVFDAVTYS 61
K GQ KA +F+ + + D +SW T+++G+ + D+ + L N+ G D S
Sbjct: 69 KQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMIS 128
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
AL C FG LH VK GL V+V +ALI MY + G++ + RVF++M +
Sbjct: 129 VALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTR 188
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
+ VSW AI++G G Y +E +L EM R + D +F A A L GK I
Sbjct: 189 NVVSWTAIIAGLVHAG-YNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAI 247
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NR 236
H +IK G+ V N L + Y+KC ++F +M +V+SWTT+IS
Sbjct: 248 HTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEE 307
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
E AV FK MR V PN TF +I + + K G IHG ++ ++ SV N +
Sbjct: 308 EHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSI 367
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNA 355
IT+Y++ ++ + VF ++ ++IISW+ +IS Y+Q G + A + +E KPN
Sbjct: 368 ITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNE 427
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+ SVL+ G+ L+ G++ H+H++ +G+D + +V SA++ MY K GS+ E+ ++F
Sbjct: 428 FALSSVLSVCGSMA--LLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIF 485
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
N + +WTA+I+ A HG + +N F+++ + G++PD + F+ VLT C GM+
Sbjct: 486 NGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVD 545
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
G + F M Y I PS +HY C++D+L R GRL EAE ++ +P V +LL A
Sbjct: 546 LGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRA 605
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
CR+HG+V+ G A+ L++++P +G+++ ++N+YA KG W+ A +RK MKSKGV KE
Sbjct: 606 CRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKER 665
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
G+SW +V D L+ F +GD HP+SE I + + L + +
Sbjct: 666 GWSWVNVN--DQLNAFVAGDQAHPQSEHITTVLKLLSANI 703
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 214/429 (49%), Gaps = 13/429 (3%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEM-MRKG 154
N+ + + G+L +AR +FD+M ++D +SW +++GY D EA++ M + G
Sbjct: 61 NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASD-SYEALILFSNMWVHPG 119
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
+ D + A AC N+ G+ +HG S+K G V V + L+ Y K
Sbjct: 120 PQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGC 179
Query: 215 KVFRRMHDRNVISWTTMIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
+VF +M RNV+SWT +I+ N E + F EM V + TF + A +
Sbjct: 180 RVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLL-YFSEMWRSKVGYDSHTFAIALKASADS 238
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+L+ G+ IH IK F V N L TMY + ++F+++ +++SW LI
Sbjct: 239 SLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLI 298
Query: 329 SGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
S Y Q G AV+AF + K PN YTF +V+++ A + K G++ H H++++G
Sbjct: 299 STYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISS--CANLAAAKWGEQIHGHVLRLG 356
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
L + V ++++ +Y K G + + VF+ K +W+ IIS ++ G + +
Sbjct: 357 LVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLS 416
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
M +G +P+ SVL+VCG ++ +G+ + +L I+ +S ++ M +
Sbjct: 417 WMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLL-CIGIDHEAMVHSAIISMYSKC 475
Query: 508 GRLEEAEEL 516
G ++EA ++
Sbjct: 476 GSVQEASKI 484
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 227/451 (50%), Gaps = 18/451 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G+ ++ +F + ++VSW +++G + + L + M V +D+
Sbjct: 166 IDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDS 225
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ AL D G +H+ +K G D +V N L TMY++ G+ R+F++
Sbjct: 226 HTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEK 285
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D VSW ++S Y Q G+ A+ A M + + + +F + S+C + +
Sbjct: 286 MRMPDVVSWTTLISTYVQMGEEE-HAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKW 344
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+QIHG +++G +SV N +++ YSKC + A+ VF + +++ISW+T+IS+ +
Sbjct: 345 GEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQ 404
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG--LCIKTNFLSEP 290
+A MR +G PN+ ++ L+++G+ +H LCI + E
Sbjct: 405 GGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGID--HEA 462
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + +I+MY++ S+Q++ K+F+ + +IISW A+I+GYA++G S A+ F +
Sbjct: 463 MVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSV 522
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
KP+ F VL A A + L + +++ ++ + L+D+ + G +
Sbjct: 523 GLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHY--GCLIDLLCRAGRL 580
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGD 438
E++ + + W+ ++ A HGD
Sbjct: 581 SEAEHIIRSMPFHTDDVVWSTLLRACRVHGD 611
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/647 (34%), Positives = 372/647 (57%), Gaps = 20/647 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K+ F+ IF+ + ++VSW ++LSG+ ++ D+ + +M + GV +
Sbjct: 146 VDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNG 205
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++T L D G+Q+H++IVK G + +V NALI MY + + +A VFD
Sbjct: 206 FTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDS 265
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +DSV+WN ++ GY G Y +E M G++L F +A C ++ L
Sbjct: 266 MVVRDSVTWNIMIGGYAAIGFY-LEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNF 324
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD--RNVISWTTMI--- 232
KQ+H +K GY + LM TYSKC +A K+F M D NV++WT MI
Sbjct: 325 TKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFS-MADAAHNVVTWTAMIGGF 383
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ N E AV LF +M +GV PN T+ ++ A +L+ + +H IK + P
Sbjct: 384 VQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL-AGKPSSLLSQ---LHAQIIKAYYEKVP 439
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
SV L+ Y + ++ +S +VF + ++I++W+A+++G AQ S A++ F ++KE
Sbjct: 440 SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KPN YTF SV+NA ++ +++HG++ H+ +K G + V SALL MY K+G+I
Sbjct: 500 GVKPNEYTFSSVINACSSSA-ATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIE 558
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++VF +E+ +W ++I+ +HGD + + F+ M+N+G+ D +TF+ VLT C
Sbjct: 559 SAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACT 618
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G F+ M+KDYHI+ +HYSCMVD+ R G ++A +++ +P ++
Sbjct: 619 HAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIW 678
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LL ACR+H N+E+G+ A+ L+ ++P + YVL+SN++A G+WE A +RK M +
Sbjct: 679 RTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDER 738
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V+KE G SW ++ + + F +GD +HP S+ +Y E L ++K
Sbjct: 739 KVKKEAGCSWIEIK--NRIFSFLAGDVSHPFSDLVYAKLEELSIKLK 783
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 252/516 (48%), Gaps = 27/516 (5%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ DI +N +L F +++ +AL ++ G+ D +T S AL C G
Sbjct: 60 LFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC----G 115
Query: 73 FLF----GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
LF G Q+H +K G +V VG +L+ MY + + R +FDEM K+ VSW +
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
+LSGY ++G E I + +M +G+ + +F + A E +E G Q+H + +K
Sbjct: 176 LLSGYARNG-LNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLF 243
G+ V N L+ Y K E+ GDA VF M R+ ++W MI + +F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
MRL GV + F + S + + +H +K + + L+ Y++
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKC 354
Query: 304 ESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSV 361
S+ ++ K+F + +++W A+I G+ QN + AV F + +E +PN +T+ +V
Sbjct: 355 SSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTV 414
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L A + SL + H+ IIK + P V +ALLD Y K G++ ES RVF K
Sbjct: 415 L----AGKPSSLL--SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAK 468
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN-GMIHKGRHL 480
AW+A+++ LA+ D E M F ++ +GV+P+ TF SV+ C + + G+ +
Sbjct: 469 DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQI 528
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ +K + S ++ M + G +E AE++
Sbjct: 529 HATAVKSGK-SNALCVSSALLTMYSKKGNIESAEKV 563
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 215/420 (51%), Gaps = 17/420 (4%)
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A ++FDE P KD +N +L ++++ ++ EA+ ++ GL +D ++ + A CG
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRN-NHDREALHLFKDLHSSGLGVDGLTLSCALKVCG 115
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ +G+Q+H S+K G+ VSVG L+ Y K E D +F M +NV+SWT+
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175
Query: 231 MIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
++S +N E + L +M+++GV PN TF ++ A++ ++++ G +H + +K
Sbjct: 176 LLSGYARNGLNDE-VIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
F VCN LI MY + E + D+E VFD + R+ ++WN +I GYA G L Q F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294
Query: 345 FGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + K + F + L +++ ++ H ++K G + + +AL+ Y
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFT--KQLHCGVVKNGYEFAQDIRTALMVTYS 352
Query: 404 KRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K S+ E+ ++F+ WTA+I ++ + E ++ F +M +GVRP+ T+
Sbjct: 353 KCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYS 412
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+VL G+ + H ++K Y+ E P + ++D + G + E+ + IP
Sbjct: 413 TVLA--GKPSSLLSQLHA--QIIKAYY-EKVPSVATALLDAYVKTGNVVESARVFYSIPA 467
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 152/323 (47%), Gaps = 7/323 (2%)
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
+A+ LFK++ G+ + +T + + GR +H +K+ FL + SV L+
Sbjct: 87 EALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLV 146
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
MY + E +D +FDE+ + ++SW +L+SGYA+NGL+ + + E PN +
Sbjct: 147 DMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGF 206
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
TF +VL A+ A++ ++ G + H+ I+K G + V +AL+ MY K + +++ VF+
Sbjct: 207 TFATVLGAL--ADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFD 264
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
+ W +I A G Y F M GV+ F + L +C + ++
Sbjct: 265 SMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNF 324
Query: 477 GRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGAC 536
+ L ++K+ + E + D + ++ + ++EA +L + +++G
Sbjct: 325 TKQLHCGVVKNGY-EFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGF 383
Query: 537 RIHGNVEMGERIADALMKMEPAG 559
+ N E+ D +M G
Sbjct: 384 VQNNN---NEKAVDLFCQMSREG 403
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/647 (34%), Positives = 372/647 (57%), Gaps = 20/647 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K+ F+ IF+ + ++VSW ++LSG+ ++ D+ + +M + GV +
Sbjct: 146 VDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNG 205
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++T L D G+Q+H++IVK G + +V NALI MY + + +A VFD
Sbjct: 206 FTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDS 265
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +DSV+WN ++ GY G Y +E M G++L F +A C ++ L
Sbjct: 266 MVVRDSVTWNIMIGGYAAIGFY-LEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNF 324
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD--RNVISWTTMI--- 232
KQ+H +K GY + LM TYSKC +A K+F M D NV++WT MI
Sbjct: 325 TKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFS-MADAAHNVVTWTAMIGGF 383
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ N + AV LF +M +GV PN T+ ++ A +L+ + +H IK + P
Sbjct: 384 VQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL-AGKPSSLLSQ---LHAQIIKAYYEKVP 439
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
SV L+ Y + ++ +S +VF + ++I++W+A+++G AQ S A++ F ++KE
Sbjct: 440 SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KPN YTF SV+NA ++ +++HG++ H+ +K G + V SALL MY K+G+I
Sbjct: 500 GVKPNEYTFSSVINACSSSA-ATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIE 558
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++VF +E+ +W ++I+ +HGD + + F+ M+N+G+ D +TF+ VLT C
Sbjct: 559 SAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACT 618
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G F+ M+KDYHI+ +HYSCMVD+ R G ++A +++ +P ++
Sbjct: 619 HAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIW 678
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LL ACR+H N+E+G+ A+ L+ ++P + YVL+SN++A G+WE A +RK M +
Sbjct: 679 RTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDER 738
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V+KE G SW ++ + + F +GD +HP S+ +Y E L ++K
Sbjct: 739 KVKKEAGCSWIEIK--NRIFSFLAGDVSHPFSDLVYAKLEELSIKLK 783
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 252/516 (48%), Gaps = 27/516 (5%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ DI +N +L F +++ +AL ++ G+ D +T S AL C G
Sbjct: 60 LFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC----G 115
Query: 73 FLF----GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
LF G Q+H +K G +V VG +L+ MY + + R +FDEM K+ VSW +
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
+LSGY ++G E I + +M +G+ + +F + A E +E G Q+H + +K
Sbjct: 176 LLSGYARNG-LNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLF 243
G+ V N L+ Y K E+ GDA VF M R+ ++W MI + +F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
MRL GV + F + S + + +H +K + + L+ Y++
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKC 354
Query: 304 ESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSV 361
S+ ++ K+F + +++W A+I G+ QN + AV F + +E +PN +T+ +V
Sbjct: 355 SSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTV 414
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L A + SL + H+ IIK + P V +ALLD Y K G++ ES RVF K
Sbjct: 415 L----AGKPSSLL--SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAK 468
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN-GMIHKGRHL 480
AW+A+++ LA+ D E M F ++ +GV+P+ TF SV+ C + + G+ +
Sbjct: 469 DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQI 528
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ +K + S ++ M + G +E AE++
Sbjct: 529 HATAVKSGK-SNALCVSSALLTMYSKKGNIESAEKV 563
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 215/420 (51%), Gaps = 17/420 (4%)
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A ++FDE P KD +N +L ++++ ++ EA+ ++ GL +D ++ + A CG
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRN-NHDREALHLFKDLHSSGLGVDGLTLSCALKVCG 115
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ +G+Q+H S+K G+ VSVG L+ Y K E D +F M +NV+SWT+
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175
Query: 231 MIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
++S +N E + L +M+++GV PN TF ++ A++ ++++ G +H + +K
Sbjct: 176 LLSGYARNGLNDE-VIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
F VCN LI MY + E + D+E VFD + R+ ++WN +I GYA G L Q F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294
Query: 345 FGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + K + F + L +++ ++ H ++K G + + +AL+ Y
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFT--KQLHCGVVKNGYEFAQDIRTALMVTYS 352
Query: 404 KRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K S+ E+ ++F+ WTA+I ++ + + ++ F +M +GVRP+ T+
Sbjct: 353 KCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYS 412
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+VL G+ + H ++K Y+ E P + ++D + G + E+ + IP
Sbjct: 413 TVLA--GKPSSLLSQLHA--QIIKAYY-EKVPSVATALLDAYVKTGNVVESARVFYSIPA 467
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 144/298 (48%), Gaps = 4/298 (1%)
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
+A+ LFK++ G+ + +T + + GR +H +K+ FL + SV L+
Sbjct: 87 EALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLV 146
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
MY + E +D +FDE+ + ++SW +L+SGYA+NGL+ + + E PN +
Sbjct: 147 DMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGF 206
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
TF +VL A+ A++ ++ G + H+ I+K G + V +AL+ MY K + +++ VF+
Sbjct: 207 TFATVLGAL--ADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFD 264
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
+ W +I A G Y F M GV+ F + L +C + ++
Sbjct: 265 SMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNF 324
Query: 477 GRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+ L ++K+ + E + D + ++ + ++EA +L + +++G
Sbjct: 325 TKQLHCGVVKNGY-EFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIG 381
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/643 (35%), Positives = 367/643 (57%), Gaps = 14/643 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVT 59
+Y K G F A +F+ + + +VSWN + S + SD +A+S M L G+ + +
Sbjct: 54 LYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFS 113
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
S+ ++ C E + G ++H ++K G DS+ + NAL+ MY++ G L +A VFDE+
Sbjct: 114 LSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIA 173
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
D VSWNAI++G +Y A+ L EM + G+ + + +SA AC ELG+
Sbjct: 174 KPDIVSWNAIIAGCVLH-EYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGR 232
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNR 236
Q+H IKM G+ +G L+ YSKC DA VF+ M +R++I+W +IS N
Sbjct: 233 QLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNE 292
Query: 237 ED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
ED A SLF M +G+ N T ++ +I+ R IH L +K+ F + V N
Sbjct: 293 EDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVN 352
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI Y + ++D+ +VF+E +++ + +L++ YAQ+G A++ + + KP
Sbjct: 353 SLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKP 412
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+++ S+LNA + + + G++ H HI+K G SD G++L++MY K GSI ++
Sbjct: 413 DSFVCSSLLNACASLS--AYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASC 470
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
F+ + +W+A+I LA+HG + + FK+M GV P+ IT +SVL C G+
Sbjct: 471 AFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGL 530
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ + +H F+SM + IEP +HY+CM+D+LGR G+LE A ELV ++P V +LL
Sbjct: 531 VAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALL 590
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
GA RIH N+++GE+ A+ L+ +EP SG++VL++N+YA G W+ VA +R+ MK V+K
Sbjct: 591 GAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKK 650
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
E G SW +V D ++ F GD +H RS EIY + L +K
Sbjct: 651 EPGMSWLEVK--DKVYTFIVGDRSHSRSTEIYAKLDELSDLLK 691
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 260/499 (52%), Gaps = 11/499 (2%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
M+L+G+ + + + L C + + G Q+H ++V G DS+ +V N+L+ +Y++ G
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
+AR +FD +P++ VSWNA+ S Y +G EA+ +M+ G+R + S +S +
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHG-EAVSLFHDMVLSGIRPNEFSLSSMIN 119
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
C ++ G++IHG IK+GY + N L+ Y+K + DA+ VF + +++S
Sbjct: 120 VCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVS 179
Query: 228 WTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
W +I+ A+ L +EM G+CPN T + A + L + GR +H I
Sbjct: 180 WNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLI 239
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K + S+ + LI MY++ SM D+ VF + R++I+WNA+ISG++QN A
Sbjct: 240 KMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAAS 299
Query: 343 AFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F + E N T +VL ++ A + + ++ H+ +K G + D V ++L+D
Sbjct: 300 LFPLMHTEGIGFNQTTLSTVLKSIAALQANYM--CRQIHALSLKSGFEFDNYVVNSLIDT 357
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
YGK G + ++ RVF E+ +T++++A A+ G E + + EM+++G++PDS
Sbjct: 358 YGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVC 417
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
S+L C +G+ + +LK + + +V+M + G +E+A +IP
Sbjct: 418 SSLLNACASLSAYEQGKQVHVHILK-FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIP 476
Query: 522 GGPGLSVLQSLLGACRIHG 540
G+ +++G HG
Sbjct: 477 -VRGIVSWSAMIGGLAQHG 494
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 232/450 (51%), Gaps = 12/450 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
++MY K G + A +F+ + PDIVSWN +++G E AL MN G+ +
Sbjct: 153 VDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNM 212
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+AL C G QLHS ++K + S+ ++G LI MYS+ + +AR VF
Sbjct: 213 FTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKL 272
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D ++WNA++SG++Q+ + EA M +G+ + + ++ + + +
Sbjct: 273 MPERDMIAWNAVISGHSQNEE-DEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYM 331
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
+QIH +S+K G+ V N L+ TY KC DA +VF +++ +T++++ +
Sbjct: 332 CRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQ 391
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
D A+ L+ EM+ G+ P+ L++A + + ++G+ +H +K F+S+
Sbjct: 392 DGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFA 451
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ MYA+ S++D+ F + R I+SW+A+I G AQ+G A+Q F ++K
Sbjct: 452 GNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGV 511
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
PN T SVL A A ++ + +S I G++ + ++D+ G+ G + +
Sbjct: 512 PPNHITLVSVLCACNHAGLVA-EAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAA 570
Query: 412 QRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ N+ + + W A++ A H + +
Sbjct: 571 MELVNKMPFQANALVWGALLGAARIHKNID 600
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/651 (35%), Positives = 369/651 (56%), Gaps = 29/651 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----SDDALSFALRMNLIGVVFD 56
+N+YC G A F++++N D+ +WN ++SG+ + S+ F+L M G+ D
Sbjct: 93 VNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPD 152
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ + L C + G ++H L +KFG +VYV +LI +Y R+G +V AR +FD
Sbjct: 153 YRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFD 209
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNL 175
EMP +D SWNA++SGY Q G+ EA+ + GLR +D V+ S SAC +
Sbjct: 210 EMPTRDMGSWNAMISGYCQSGN-AKEAL-----TLSDGLRAMDSVTVVSLLSACTEAGDF 263
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
G IH SIK G + + V N L+ Y++ D KVF RM+ R++ISW ++I
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 234 -MNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN-FLSE 289
+N + A+ LF+EMRL + P+ +T I L +S ++ R + G ++ FL +
Sbjct: 324 ELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLED 383
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
++ N ++ MYA+ + + VF+ L +++ISWN +ISGYAQNG + A++ + +++
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIE-MYNIME 442
Query: 350 ES----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
E N T+ SVL A A +L+ G + H ++K GL D VG++L DMYGK
Sbjct: 443 EEGGEISANQGTWVSVLPACSQAG--ALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKC 500
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++ +F + + W +I+ HG E + FKEM ++GV+PD ITF+++L
Sbjct: 501 GRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 560
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C +G++ +G F+ M DY I PS HY CMVD+ GR G+LE A + +P P
Sbjct: 561 SACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPD 620
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
S+ +LL ACR+HGNV++G+ ++ L ++EP G +VL+SN+YA G WE V +R
Sbjct: 621 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 680
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
KG+RK G+S +V + + F +G+ THP EE+YR L ++K
Sbjct: 681 TSGKGLRKTPGWSSMEVD--NKVEVFYTGNQTHPMYEEMYRELTALHEKLK 729
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 145/484 (29%), Positives = 234/484 (48%), Gaps = 40/484 (8%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH+ +V V + L+ +Y G + AR FD + N+D +WN ++SGY + G
Sbjct: 73 LHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAG- 131
Query: 139 YGVEAILAL-IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
Y E I + M+ GL+ D+ +F S AC +N+ G +IH +++K G+ V V
Sbjct: 132 YSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC---RNVTDGNKIHCLALKFGFMWDVYVA 188
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVC 252
L+ Y + +A +F M R++ SW MI S N ++A++L +R
Sbjct: 189 ASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR----A 244
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
+ VT + L+ A + G IH IK SE V N LI +YA F S++D +KV
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKV 304
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYT---FGSVLNAVGAA 368
FD + R++ISWN++I Y N L A+ F + + +P+ T S+L+ +G
Sbjct: 305 FDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLG-- 362
Query: 369 EDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
++ + ++ G D +G+A++ MY K G + ++ VFN K +W
Sbjct: 363 ---EIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWN 419
Query: 428 AIISALARHGDYESVMNQFKEMENKG--VRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
IIS A++G + + ME +G + + T++SVL C + G + +G L +L
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLL 479
Query: 486 K-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR-IH 539
K D + S + DM G+ GRL++A L QIP SV + L AC H
Sbjct: 480 KNGLYLDVFVGTS------LADMYGKCGRLDDALSLFYQIPRVN--SVPWNTLIACHGFH 531
Query: 540 GNVE 543
G+ E
Sbjct: 532 GHGE 535
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 128/333 (38%), Gaps = 62/333 (18%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS--GFE-KSDDALSFALRMNLIGVVFDAV 58
+MY K G+ D AL +F + + V WNT+++ GF + A+ M GV D +
Sbjct: 495 DMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI 554
Query: 59 TYSTALSFCLDHEGFLFGLQ--LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ T LS C H G + + + +G+ + ++ +Y R G+L A
Sbjct: 555 TFVTLLSAC-SHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIK 613
Query: 117 EMP-NKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
MP D+ W A+LS G D G A L E+ + + HV ++ ++ G +
Sbjct: 614 SMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY-HVLLSNMYASAGKWE 672
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK-------VFRRM------ 220
++ + SI G G + G M +K EV N+ ++R +
Sbjct: 673 GVDEIR-----SITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEK 727
Query: 221 ----------------------------HDRNVISWTTMISMNREDAVSLFKEMRLDGVC 252
H + +I+ + + +FK +R+ G C
Sbjct: 728 LKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDC 787
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIH----GLC 281
+ FI I I +V++ H G+C
Sbjct: 788 HSVTKFISKITEREI--IVRDSNRFHHFKNGVC 818
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/646 (34%), Positives = 370/646 (57%), Gaps = 17/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++++CK G +A +F ++ V ++ +L G+ K+ DAL F LRM V
Sbjct: 86 ISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVV 145
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y+ L C ++ G ++H LI+ G +S ++V A++++Y++ ++ A ++F+
Sbjct: 146 GDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFER 205
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +KD VSW +++GY Q+G + A+ +++M G + D V+ S A K L +
Sbjct: 206 MQHKDLVSWTTLVAGYAQNG-HAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRI 264
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+ IHG + + G+ + V+V N L+ Y KC A VF+ M + V+SW TMI
Sbjct: 265 GRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQ 324
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E+A + F +M +G P VT +G++ A + ++ G +H L K S SV
Sbjct: 325 NGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSV 384
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI+MY++ + + + +F+ L + ++WNA+I GYAQNG A+ F + +
Sbjct: 385 MNSLISMYSKCKRVDIAASIFNNLE-KTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGI 443
Query: 352 KPNAYTFGSVLNAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
K + +T V+ A+ D S+ + + H ++ +D++ V +AL+DMY K G+I
Sbjct: 444 KLDCFTLVGVITALA---DFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKT 500
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++++F+ QE+ W A+I HG + ++ F EM+ V+P+ ITFLSV++ C
Sbjct: 501 ARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSH 560
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G + +G LF SM +DY++EP+ DHYS MVD+LGR G+L++A + ++P PG+SVL
Sbjct: 561 SGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLG 620
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
++LGAC+IH NVE+GE+ A L K++P G +VL++N+YA W+ VA +R M+ KG
Sbjct: 621 AMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKG 680
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ K G SW ++ + +H F SG HP S++IY E LG E+K
Sbjct: 681 LHKTPGCSWVELR--NEIHTFYSGSTNHPESKKIYAFLETLGDEIK 724
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 248/512 (48%), Gaps = 53/512 (10%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+ I+K G +E +I+++ ++G EA RVF+ + K V ++ +L GY ++
Sbjct: 65 QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNS 124
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
G +A+ + MM +RL + CG +L+ G++IHG+ I G+ +++ V
Sbjct: 125 SLG-DALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVM 183
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVC 252
+MS Y+KC +A K+F RM ++++SWTT+++ ++ A+ L +M+ G
Sbjct: 184 TAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQK 243
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ VT + ++ A++ ++ GR IHG ++ F S +V N L+ MY + S + + V
Sbjct: 244 PDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLV 303
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDI 371
F + + ++SWN +I G AQNG S A F ++ E + P T VL A D
Sbjct: 304 FKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGD- 362
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
L+ G H + K+ LDS+ V ++L+ MY K + + +FN EK+ W A+I
Sbjct: 363 -LERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMIL 420
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT--------------------VCGRN 471
A++G + +N F M+++G++ D T + V+T C N
Sbjct: 421 GYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDN 480
Query: 472 ---------------GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
G I R LFD M+++ H+ ++ M+D G G +E +L
Sbjct: 481 NVFVSTALVDMYAKCGAIKTARKLFD-MMQERHVIT----WNAMIDGYGTHGVGKETLDL 535
Query: 517 VGQIPGG---PGLSVLQSLLGACRIHGNVEMG 545
++ G P S++ AC G VE G
Sbjct: 536 FNEMQKGAVKPNDITFLSVISACSHSGFVEEG 567
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
KE I IK F +E +I+++ +F S ++ +VF+ + + + ++ ++ GY
Sbjct: 61 KELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGY 120
Query: 332 AQNGLSLAAVQAFF--GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
A+N SL FF + E + + +L G E++ LK G+ H II G +
Sbjct: 121 AKNS-SLGDALCFFLRMMCDEVRLVVGDYACLLQLCG--ENLDLKKGREIHGLIITNGFE 177
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
S+ V +A++ +Y K I + ++F Q K +WT +++ A++G + + +M
Sbjct: 178 SNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQM 237
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+ G +PDS+T +S+L + GR +
Sbjct: 238 QEAGQKPDSVTLVSILPAVADMKALRIGRSI 268
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/633 (36%), Positives = 369/633 (58%), Gaps = 18/633 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDAL-SFALRMNLIGVVFD 56
+N+ KS + D A +F+ + + ++++W++++S + + S++AL F G +
Sbjct: 91 INVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPN 150
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ + C G QLH +V+ G D +VYVG +LI YS+ G + EAR VFD
Sbjct: 151 EFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFD 210
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNL 175
++ K +V+W I++GYT+ G V L L MR+ + D +S SAC + L
Sbjct: 211 QLSEKTAVTWTTIIAGYTKCGRSAVS--LELFAQMRETNVVPDRYVVSSVLSACSMLEFL 268
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
E GKQIH ++ G VSV NVL+ Y+KC K+F +M +N+ISWTTMIS
Sbjct: 269 EGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGY 328
Query: 234 -MNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
N D A+ LF EM G P+ ++ + +++GR +H IK N S+
Sbjct: 329 MQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDE 388
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
V N LI MYA+ + D++KVFD ++ + +IS+NA+I GY+ A++ F + ++
Sbjct: 389 FVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVR 448
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KPN +TF +++ A A+ SL+HGQ+ H+ ++K+GLD P V +AL+DMY K GSI
Sbjct: 449 LQKPNEFTFAALITA--ASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIE 506
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E++++FN + + W ++IS A+HG+ E + F+EM +G++P+ +TF++VL+ C
Sbjct: 507 EARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS 566
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G + G + F+SM + I+P +HY+C+V +LGR G+L EA+E + ++P P V
Sbjct: 567 HAGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVW 625
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+SLL ACRI GNVE+G+ A+ + +P SGSY+L+SN++A KG W V +R M S
Sbjct: 626 RSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSS 685
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSE 622
V KE G SW +V + ++ F + D TH ++
Sbjct: 686 EVVKEPGRSWIEVN--NKVNVFIARDTTHREAD 716
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 238/446 (53%), Gaps = 13/446 (2%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H I+ GL S+ ++ N LI + S+ R+ AR VFD+MP+K+ ++W++++S Y+Q G
Sbjct: 71 IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQG- 129
Query: 139 YGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
Y EA++ +++ RK G + S AC +E G Q+HG ++ G+ V VG
Sbjct: 130 YSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVG 189
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE---DAVS--LFKEMRLDGVC 252
L+ YSK +A VF ++ ++ ++WTT+I+ + AVS LF +MR V
Sbjct: 190 TSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVV 249
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ ++ A S+ ++ G+ IH ++ + SV N LI Y + ++ K+
Sbjct: 250 PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKL 309
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAED 370
FD++ + IISW +ISGY QN A++ FG + KP+ + SVL + G+ E
Sbjct: 310 FDQMVVKNIISWTTMISGYMQNSFDWEAMK-LFGEMNRLGWKPDGFACTSVLTSCGSRE- 367
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+L+ G++ H++ IK L+SD V + L+DMY K + ++++VF+ E++ ++ A+I
Sbjct: 368 -ALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMI 426
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
+ + F EM + +P+ TF +++T + G+ + ++K +
Sbjct: 427 EGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVK-MGL 485
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ P + +VDM + G +EEA ++
Sbjct: 486 DFCPFVTNALVDMYAKCGSIEEARKM 511
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 188/347 (54%), Gaps = 14/347 (4%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
K IHG I G + + N+L++ SK + +A VF +M +N+I+W++M+SM
Sbjct: 69 KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 128
Query: 235 -NREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E+A+ +F ++ R G PN+ +I A + +V++G +HG +++ F + V
Sbjct: 129 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 188
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
LI Y++ +++++ VFD+LS + ++W +I+GY + G S +++ F ++E+
Sbjct: 189 GTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLE-LFAQMRETN 247
Query: 353 --PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ Y SVL+A E L+ G++ H+++++ G + D V + L+D Y K +
Sbjct: 248 VVPDRYVVSSVLSACSMLE--FLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKA 305
Query: 411 SQRVFNETQEKSEFAWTAIISALARHG-DYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++F++ K+ +WT +IS ++ D+E+ M F EM G +PD SVLT CG
Sbjct: 306 GRKLFDQMVVKNIISWTTMISGYMQNSFDWEA-MKLFGEMNRLGWKPDGFACTSVLTSCG 364
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ +GR + +K ++E + ++DM + L +A+++
Sbjct: 365 SREALEQGRQVHAYTIKA-NLESDEFVKNGLIDMYAKSNLLIDAKKV 410
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 137/280 (48%), Gaps = 11/280 (3%)
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
+++ + P F L+ N + ++IHG I + S+ + N LI + ++ +
Sbjct: 40 LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 99
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLN 363
+ ++ VFD++ + +I+W++++S Y+Q G S A+ F + ++S PN + SV+
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 159
Query: 364 A---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
A +G E G + H +++ G D D VG++L+D Y K G+I E++ VF++ E
Sbjct: 160 ACTQLGVVEK-----GAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSE 214
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
K+ WT II+ + G + F +M V PD SVL+ C + G+ +
Sbjct: 215 KTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQI 274
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+L+ E + ++D + R++ +L Q+
Sbjct: 275 HAYVLRR-GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM 313
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/632 (34%), Positives = 352/632 (55%), Gaps = 16/632 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNN-PDIVSWNTVLSGFEKSDDALSFAL---RMNLIGVVFDAV 58
MY K G + A +F+ + D+ W ++SG+ K+ D L +M+ GV DA
Sbjct: 138 MYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAY 197
Query: 59 TYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S L C+ G + G +H L+ K G S+ VGNAL+ Y++ R +A VFD
Sbjct: 198 TISCVLK-CIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDG 256
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP++D +SWN+++SG T +G Y +AI + M +G LD + S AC L L
Sbjct: 257 MPHRDVISWNSMISGCTSNGLYD-KAIELFVRMWLEGEELDSATLLSVLPACAELHLLFL 315
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNR 236
G+ +HG S+K G+ + S+ NVL+ YS C NK+FR M +NV+SWT MI S R
Sbjct: 316 GRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTR 375
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ LF+EM L+G P+ +HA + L+K G+ +HG I+ +V
Sbjct: 376 AGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAV 435
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ MY + +M++++ +FD + +++ISWN LI GY++N L+ A F ++ + +
Sbjct: 436 TNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLR 495
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PNA T +L A AA SL+ G+ H++ ++ G D V +AL+DMY K G++ ++
Sbjct: 496 PNAVTMTCILPA--AASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLAR 553
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
R+F+ K+ +WT +++ HG + F++M G+ PD+ +F ++L C +G
Sbjct: 554 RLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSG 613
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+ +G FD+M K++ IEP HY+CMVD+L G L+EA E + +P P S+ SL
Sbjct: 614 LRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSL 673
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L CRIH NV++ E +A+ + ++EP +G YVL++N+YAE WE V L+ + +G+R
Sbjct: 674 LRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLR 733
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
+ G SW + +H F + + HP+ I
Sbjct: 734 ENTGCSWIEAK--GKVHVFIADNRNHPQGTRI 763
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 246/479 (51%), Gaps = 23/479 (4%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIV-----KFGLDSEVYVGNALITMYSRWGRLVE 110
D +Y L C + G + H L+ + G+D+ +G L+ MY + G L
Sbjct: 90 DDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDN--VLGQKLVLMYLKCGDLEN 147
Query: 111 ARRVFDEMPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
ARRVFDEMP V W A++SGY + GD E +L +M G+R D + +
Sbjct: 148 ARRVFDEMPQVSDVRVWTALMSGYAKAGDLR-EGVLLFRKMHCCGVRPDAYTISCVLKCI 206
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
++E G+ +HG+ K+G+G+ +VGN LM+ Y+K T DA VF M R+VISW
Sbjct: 207 AGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWN 266
Query: 230 TMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
+MIS + A+ LF M L+G + T + ++ A + +L+ GR++HG +KT
Sbjct: 267 SMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKT 326
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
F+S+ S+ N L+ MY+ + + K+F + + ++SW A+I+ Y + GL F
Sbjct: 327 GFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLF 386
Query: 345 FGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ ++ ++P+ + S L+A E LKHG+ H + I+ G++ V +AL++MY
Sbjct: 387 QEMGLEGTRPDIFAITSALHAFAGNE--LLKHGKSVHGYAIRNGMEKVLAVTNALMEMYV 444
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G++ E++ +F+ K +W +I +R+ + F EM + +RP+++T
Sbjct: 445 KCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTC 503
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
+L + +GR + L+ ++E D + + ++DM + G L A L ++
Sbjct: 504 ILPAAASLSSLERGREMHAYALRRGYLE---DDFVANALIDMYVKCGALLLARRLFDRL 559
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/538 (27%), Positives = 258/538 (47%), Gaps = 55/538 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M Y KS + A+ +F+ + + D++SWN+++SG + D A+ +RM L G D+
Sbjct: 238 MAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDS 297
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C + G +H VK G S+ + N L+ MYS ++F
Sbjct: 298 ATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRN 357
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ VSW A+++ YT+ G Y A L EM +G R D + TSA A + L+
Sbjct: 358 MVQKNVVSWTAMITSYTRAGLYDKVAGL-FQEMGLEGTRPDIFAITSALHAFAGNELLKH 416
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
GK +HG +I+ G ++V N LM Y KC +A +F + +++ISW T+I S
Sbjct: 417 GKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSR 476
Query: 235 NR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N +A SLF EM L + PN VT ++ A + + ++ GR +H ++ +L + V
Sbjct: 477 NNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFV 535
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI MY + ++ + ++FD LS + +ISW +++GY +G A+ A F ++ S
Sbjct: 536 ANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAI-ALFEQMRVSG 594
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+A +F ++L A HS + G F+
Sbjct: 595 IAPDAASFSAILYACS-------------HSGLRDEGW------------------RFFD 623
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ R ++ + + + +T ++ L G+ + ++ +++ + PDS ++S+L C
Sbjct: 624 AMRKEHKIEPRLKH-YTCMVDLLINTGNLKEA---YEFIDSMPIEPDSSIWVSLLRGC-- 677
Query: 471 NGMIHKGRHLFDSMLKD-YHIEP-SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
IH+ L + + + + +EP + +Y + ++ R E +L +I GG GL
Sbjct: 678 --RIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKI-GGRGL 732
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/683 (32%), Positives = 372/683 (54%), Gaps = 54/683 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+N Y K G +F + D+V+W+++++ + ++ A RM + +
Sbjct: 120 INFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNR 179
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ + L C ++ ++H+++ G++++V V ALITMYS+ G + A +F +
Sbjct: 180 ITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQK 239
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++ VSW AI+ Q EA +M++ G+ + V+F S ++C + L
Sbjct: 240 MKERNVVSWTAIIQANAQHRKLN-EAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNR 298
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G++IH + G T V V N L++ Y KC DA + F RM R+VISW+ MI+
Sbjct: 299 GRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQ 358
Query: 234 ---MNRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
++E + L + MR +GV PN VTF+ ++ A S+ +++GR IH K F
Sbjct: 359 SGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFE 418
Query: 288 SEPSVCNCLITMYAR----------FESMQD---------------------SEKVFDEL 316
S+ S+ + MYA+ F M++ +EKVF E+
Sbjct: 419 SDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEM 478
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLK 374
S R ++SWN +I+GYAQ+G +A V +K +P+ T S+L A GA +L+
Sbjct: 479 STRNVVSWNLMIAGYAQSG-DIAKVFELLSSMKVEGFQPDRVTIISILEACGALS--ALE 535
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G+ H+ +K+GL+SD +V ++L+ MY K G + E++ VF++ + AW A+++
Sbjct: 536 RGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYG 595
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
+HG ++ FK M + V P+ ITF +V++ CGR G++ +GR +F M +D+ ++P
Sbjct: 596 QHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGK 655
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
HY CMVD+LGR GRL+EAEE + ++P P +SV +LLGAC+ H NV++ E A +++
Sbjct: 656 QHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILR 715
Query: 555 MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG-LHGFSS 613
+EP+ + YV +SN+YA+ G W+ +RK M KG++K+ G S +IDG +H F +
Sbjct: 716 LEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSI---EIDGRIHTFVA 772
Query: 614 GDNTHPRSEEIYRMAECLGSEMK 636
D HP + I+ E L EMK
Sbjct: 773 EDCAHPEIDSIHAELEMLTKEMK 795
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 262/511 (51%), Gaps = 46/511 (9%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
G++ ++ TY + C F G +H + + GL ++Y+GN+LI YS++G +
Sbjct: 73 GLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASV 132
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+VF M +D V+W+++++ Y + ++ +A M + + ++F S AC +
Sbjct: 133 EQVFRRMTLRDVVTWSSMIAAYAGN-NHPAKAFDTFERMKDANIEPNRITFLSILKACNN 191
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
LE ++IH V G T V+V L++ YSKC A ++F++M +RNV+SWT +
Sbjct: 192 YSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAI 251
Query: 232 ISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I N + +A L+++M G+ PN VTF+ L+++ + + GR IH +
Sbjct: 252 IQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGL 311
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS-LAAVQAFF 345
++ V N LITMY + +QD+ + FD +S R++ISW+A+I+GYAQ+G ++ F
Sbjct: 312 ETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVF 371
Query: 346 GVIKESK-----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
+++ + PN TF S+L A +L+ G++ H+ I KVG +SD + +A+ +
Sbjct: 372 QLLERMRREGVFPNKVTFMSILKACSVHG--ALEQGRQIHAEISKVGFESDRSLQTAIFN 429
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK-------- 452
MY K GSI+E+++VF++ + K+ AW ++++ + GD S F EM +
Sbjct: 430 MYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLM 489
Query: 453 -----------------------GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
G +PD +T +S+L CG + +G+ + +K
Sbjct: 490 IAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVK-LG 548
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+E + ++ M + G + EA + +I
Sbjct: 549 LESDTVVATSLIGMYSKCGEVTEARTVFDKI 579
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 237/464 (51%), Gaps = 18/464 (3%)
Query: 142 EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLM 201
EAI L + ++GL ++ ++ C + E GK +H ++G + +GN L+
Sbjct: 61 EAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLI 120
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDV 256
+ YSK +VFRRM R+V++W++MI+ + A F+ M+ + PN +
Sbjct: 121 NFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRI 180
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
TF+ ++ A + +++++ R IH + + ++ +V LITMY++ + + ++F ++
Sbjct: 181 TFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKM 240
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKH 375
R ++SW A+I AQ+ A + + +++ PNA TF S+LN+ E +L
Sbjct: 241 KERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPE--ALNR 298
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G+R HSHI + GL++D +V +AL+ MY K I +++ F+ ++ +W+A+I+ A+
Sbjct: 299 GRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQ 358
Query: 436 HG--DYES---VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
G D ES V + M +GV P+ +TF+S+L C +G + +GR + + K
Sbjct: 359 SGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK-VGF 417
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIAD 550
E + + +M + G + EAE++ ++ + SLL G++ E++
Sbjct: 418 ESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASLLTMYIKCGDLTSAEKV-- 474
Query: 551 ALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
+M S+ LM YA+ GD V L MK +G + +
Sbjct: 475 -FSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPD 517
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/646 (34%), Positives = 373/646 (57%), Gaps = 18/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M+ + G A +F ++ D+ SWN ++ G+ K+ D+AL+ RM + +
Sbjct: 139 LSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNV 198
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L C G ++H+ +++FG +S+V VGNALITMY + G + AR +FD+
Sbjct: 199 YTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDK 258
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
MP +D +SWNA++SGY ++G G+E L L MMR+ + D ++ T+ ASAC N
Sbjct: 259 MPKRDRISWNAMISGYFENGG-GLEG-LELFSMMRELSVDPDLITMTTVASACELLDNER 316
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
LG+ +HG +K +G +S+ N L+ YS +A VF RM ++V+SWT MI+
Sbjct: 317 LGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLV 376
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
AV +K M L+G+ P+++T + ++ A + + G +H + IKT +S
Sbjct: 377 SHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVI 436
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI MY++ + + ++ +VF +S + ++SW +LI G N S A+ FF +KES
Sbjct: 437 VSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL-LFFRQMKES 495
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN+ T SVL+A A +L G+ H+H ++ G+ D + +A+LDMY + G
Sbjct: 496 MKPNSVTLISVLSA--CARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVP 553
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ FN +Q+K AW +++ A+ G + + F +M + PD ITF+S+L C +
Sbjct: 554 ALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSK 612
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+GM+ +G F+ M Y++ P+ HY+C+VD+LGR G+L++A + + +P P ++
Sbjct: 613 SGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWG 672
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL ACRIH NVE+GE A + + + G Y+L+ NLYA G+W+ V+ +R M+ +G
Sbjct: 673 ALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERG 732
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ + G SW ++ +H F SGDN+H +S+EI + + S+MK
Sbjct: 733 LSADPGCSWVEIK--GKVHAFLSGDNSHSQSKEINGVLDGFCSKMK 776
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 213/401 (53%), Gaps = 10/401 (2%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
V +GNAL++M+ R+G L++A VF +M +D SWN ++ GY + G + EA+ M+
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFD-EALNLYHRML 190
Query: 152 RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
+R + +F S C ++ GK+IH I+ G+ + V VGN L++ Y KC
Sbjct: 191 WAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS 250
Query: 212 DANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
+A +F +M R+ ISW MIS E + + LF MR V P+ +T + A
Sbjct: 251 NARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACE 310
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNA 326
+ + + GR +HG +K+ F + S+ N LI MY+ ++++E VF + ++++SW A
Sbjct: 311 LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTA 370
Query: 327 LISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
+I+ + L AV+ + + E P+ T SVL+A + L G R H IK
Sbjct: 371 MIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDL--GIRLHEIAIK 428
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
GL S IV ++L+DMY K + + VF K+ +WT++I L + +
Sbjct: 429 TGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLF 488
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
F++M+ + ++P+S+T +SVL+ C R G + +G+ + L+
Sbjct: 489 FRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALR 528
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 42/236 (17%)
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+G+ALL M+ + G++ ++ VF + E+ F+W ++ A+ G ++ +N + M
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+RP+ TF SVL C I +G+ + +++ + E D + ++ M + G + A
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIR-FGFESDVDVGNALITMYVKCGDISNA 252
Query: 514 EELVGQIP-----------------GG-----------------PGLSVLQSLLGACRIH 539
L ++P GG P L + ++ AC +
Sbjct: 253 RMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELL 312
Query: 540 GNVEMGERIADALMKMEPAGSGSYVLMSN----LYAEKGDWEMVAILRKGMKSKGV 591
N +G + ++K E G S M+N +Y+ G E + M+SK V
Sbjct: 313 DNERLGRGVHGYVVKSEFGGDIS---MNNSLIQMYSSLGRLEEAETVFSRMESKDV 365
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/646 (34%), Positives = 373/646 (57%), Gaps = 18/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M+ + G A +F ++ D+ SWN ++ G+ K+ D+AL+ RM + +
Sbjct: 139 LSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNV 198
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L C G ++H+ +++FG +S+V VGNALITMY + G + AR +FD+
Sbjct: 199 YTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDK 258
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
MP +D +SWNA++SGY ++G G+E L L MMR+ + D ++ T+ ASAC N
Sbjct: 259 MPKRDRISWNAMISGYFENGG-GLEG-LELFSMMRELSVDPDLITMTTVASACELLDNER 316
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
LG+ +HG +K +G +S+ N L+ YS +A VF RM ++V+SWT MI+
Sbjct: 317 LGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLV 376
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
AV +K M L+G+ P+++T + ++ A + + G +H + IKT +S
Sbjct: 377 SHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVI 436
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI MY++ + + ++ +VF +S + ++SW +LI G N S A+ FF +KES
Sbjct: 437 VSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL-LFFRQMKES 495
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN+ T SVL+A A +L G+ H+H ++ G+ D + +A+LDMY + G
Sbjct: 496 MKPNSVTLISVLSA--CARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVP 553
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ FN +Q+K AW +++ A+ G + + F +M + PD ITF+S+L C +
Sbjct: 554 ALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSK 612
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+GM+ +G F+ M Y++ P+ HY+C+VD+LGR G+L++A + + +P P ++
Sbjct: 613 SGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWG 672
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL ACRIH NVE+GE A + + + G Y+L+ NLYA G+W+ V+ +R M+ +G
Sbjct: 673 ALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERG 732
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ + G SW ++ +H F SGDN+H +S+EI + + S+MK
Sbjct: 733 LSADPGCSWVEIK--GKVHAFLSGDNSHSQSKEINGVLDGFCSKMK 776
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 213/401 (53%), Gaps = 10/401 (2%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
V +GNAL++M+ R+G L++A VF +M +D SWN ++ GY + G + EA+ M+
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFD-EALNLYHRML 190
Query: 152 RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
+R + +F S C ++ GK+IH I+ G+ + V VGN L++ Y KC
Sbjct: 191 WAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS 250
Query: 212 DANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
+A +F +M R+ ISW MIS E + + LF MR V P+ +T + A
Sbjct: 251 NARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACE 310
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNA 326
+ + + GR +HG +K+ F + S+ N LI MY+ ++++E VF + ++++SW A
Sbjct: 311 LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTA 370
Query: 327 LISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
+I+ + L AV+ + + E P+ T SVL+A + L G R H IK
Sbjct: 371 MIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDL--GIRLHEIAIK 428
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
GL S IV ++L+DMY K + + VF K+ +WT++I L + +
Sbjct: 429 TGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLF 488
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
F++M+ + ++P+S+T +SVL+ C R G + +G+ + L+
Sbjct: 489 FRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALR 528
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 42/236 (17%)
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+G+ALL M+ + G++ ++ VF + E+ F+W ++ A+ G ++ +N + M
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+RP+ TF SVL C I +G+ + +++ + E D + ++ M + G + A
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIR-FGFESDVDVGNALITMYVKCGDISNA 252
Query: 514 EELVGQIP-----------------GG-----------------PGLSVLQSLLGACRIH 539
L ++P GG P L + ++ AC +
Sbjct: 253 RMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELL 312
Query: 540 GNVEMGERIADALMKMEPAGSGSYVLMSN----LYAEKGDWEMVAILRKGMKSKGV 591
N +G + ++K E G S M+N +Y+ G E + M+SK V
Sbjct: 313 DNERLGRGVHGYVVKSEFGGDIS---MNNSLIQMYSSLGRLEEAETVFSRMESKDV 365
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/645 (33%), Positives = 364/645 (56%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++++C+ G D+A +F +++ V ++T+L GF K D AL F +RM V
Sbjct: 76 VSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVV 135
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ L C D G ++H L+VK G +++ L MY++ ++ EAR+VFD
Sbjct: 136 YNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR 195
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D VSWN I++GY+Q+G A+ + M + L+ ++ S A + + +
Sbjct: 196 MPERDLVSWNTIVAGYSQNG-MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK+IHG +++ G+ + V++ L+ Y+KC A ++F M +RNV+SW +MI
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++A+ +F++M +GV P DV+ +G +HA + ++ GR IH L ++ SV
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI+MY + + + + +F +L R ++SWNA+I G+AQNG + A+ F + +
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+ +T+ SV+ A+ AE H + H +++ LD + V +AL+DMY K G+I +
Sbjct: 435 KPDTFTYVSVITAI--AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ +F+ E+ W A+I HG ++ + F+EM+ ++P+ +TFLSV++ C +
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ G F M ++Y IE S DHY MVD+LGR GRL EA + + Q+P P ++V +
Sbjct: 553 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
+LGAC+IH NV E+ A+ L ++ P G +VL++N+Y WE V +R M +G+
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
RK G S ++ + +H F SG HP S++IY E L +K
Sbjct: 673 RKTPGCSMVEIK--NEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 238/440 (54%), Gaps = 12/440 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+ L+ K GL E + L++++ R+G + EA RVF+ + +K +V ++ +L G+ +
Sbjct: 55 QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVS 114
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
D +A+ + M + +FT CG E L +GK+IHG+ +K G+ +
Sbjct: 115 DLD-KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVC 252
L + Y+KC +A KVF RM +R+++SW T+++ ++ A+ + K M + +
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ +T + ++ A+S L+ G+ IHG +++ F S ++ L+ MYA+ S++ + ++
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
FD + R ++SWN++I Y QN A+ F ++ E KP T SV+ A+ A D+
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP---TDVSVMGALHACADL 350
Query: 372 -SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
L+ G+ H +++GLD + V ++L+ MY K + + +F + Q ++ +W A+I
Sbjct: 351 GDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMI 410
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
A++G +N F +M ++ V+PD+ T++SV+T + H + + +++ +
Sbjct: 411 LGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC-L 469
Query: 491 EPSPDHYSCMVDMLGRVGRL 510
+ + + +VDM + G +
Sbjct: 470 DKNVFVTTALVDMYAKCGAI 489
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 120/255 (47%), Gaps = 20/255 (7%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+KE R I L K E L++++ R+ S+ ++ +VF+ + + + ++ ++ G
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG 109
Query: 331 YAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
+A+ A+Q F + + +P Y F +L G ++ L+ G+ H ++K G
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCG--DEAELRVGKEIHGLLVKSGFS 167
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
D + L +MY K + E+++VF+ E+ +W I++ +++G + K M
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHL--------FDSMLKDYHIEPSPDHYSCMV 501
+ ++P IT +SVL +I G+ + FDS++ + + +V
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV---------NISTALV 278
Query: 502 DMLGRVGRLEEAEEL 516
DM + G LE A +L
Sbjct: 279 DMYAKCGSLETARQL 293
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 5/152 (3%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SLK ++ + K GL + + L+ ++ + GS+ E+ RVF K + ++
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A+ D + + F M V P F +L VCG + G+ + ++K
Sbjct: 109 GFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF-- 166
Query: 492 PSPDHYSC--MVDMLGRVGRLEEAEELVGQIP 521
S D ++ + +M + ++ EA ++ ++P
Sbjct: 167 -SLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/653 (34%), Positives = 364/653 (55%), Gaps = 32/653 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA----------LSFALRMNL 50
+ MY K G A +F+ D+V+WN +L + S D+ L LR +L
Sbjct: 119 LTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASL 178
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
+T + L CL+ +H +K GL+ +V+V AL+ +YS+ GR+ +
Sbjct: 179 GSTT--RMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRD 236
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC- 169
AR +FD M +D V WN +L GY Q G EA E R GLR D S + C
Sbjct: 237 ARLLFDWMRERDVVLWNMMLKGYVQLG-LEKEAFQLFSEFHRSGLRPDEFSVQLILNGCL 295
Query: 170 -GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
+LELGKQ+HG+++K G + VSV N L++ YSK A +VF M ++ISW
Sbjct: 296 WAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISW 355
Query: 229 TTMISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN-----LVKEGRMIH 278
+MIS E++V+LF ++ +G+ P+ T + A + L+ +G+ IH
Sbjct: 356 NSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIH 415
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
IK F S+ V + ++ MY + M ++ VF+ +S + ++W ++ISG NG
Sbjct: 416 AHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNED 475
Query: 339 AAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
A++ + +++S+ P+ YTF +++ A +L+ G++ H+++IK+ SDP VG+
Sbjct: 476 QALR-IYHRMRQSRVMPDEYTFATLIKASSCV--TALEQGRQLHANVIKLDCVSDPFVGT 532
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
+L+DMY K G+I ++ R+F + ++ W A++ LA+HG+ E +N FK M++ G+ P
Sbjct: 533 SLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEP 592
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
D ++F+ +L+ C G+ + SM DY IEP +HYSC+VD LGR G ++EA+++
Sbjct: 593 DRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKV 652
Query: 517 VGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDW 576
+ +P S+ ++LLGACRI G+VE G+R+A L +EP S +YVL+SN+YA W
Sbjct: 653 IETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRW 712
Query: 577 EMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
+ V RK MK K V+K+ GFSW DV ++ LH F D +HP+++ IY E
Sbjct: 713 DDVTDARKMMKRKNVKKDPGFSWIDVKNM--LHLFVVDDRSHPQADIIYDKVE 763
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 242/488 (49%), Gaps = 21/488 (4%)
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
L G H+ IV G + ++ N L+TMYS+ G L AR+VFD P +D V+WNAIL
Sbjct: 93 LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 152
Query: 133 Y---TQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
Y D + L L ++R L ++ C + L + +HG +IK+
Sbjct: 153 YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKI 212
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLF 243
G V V L++ YSKC DA +F M +R+V+ W M+ ++A LF
Sbjct: 213 GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLF 272
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
E G+ P++ + +++ ++ G+ +HG+ +K+ S+ SV N L+ MY+
Sbjct: 273 SEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYS 332
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
+ + +VF+++ ++ISWN++IS AQ+ L +V F ++ E KP+ +T S
Sbjct: 333 KMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLAS 392
Query: 361 VLNAVGAAED---ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
+ A A + L G++ H+H IK G DSD V S +LDMY K G + + VFN
Sbjct: 393 ITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNY 452
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
+ AWT++IS +G+ + + + M V PD TF +++ + +G
Sbjct: 453 ISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQG 512
Query: 478 RHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
R L +++K ++ D + + +VDM + G +E+A L ++ +++ ++L
Sbjct: 513 RQLHANVIK---LDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM-NVRNIALWNAMLVG 568
Query: 536 CRIHGNVE 543
HGN E
Sbjct: 569 LAQHGNAE 576
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/615 (38%), Positives = 348/615 (56%), Gaps = 16/615 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMY K + D A +FN+L +IV WN +L GF + + + + F M G D
Sbjct: 351 VNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDE 410
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ S C FG QLH++++K S ++V NAL+ MY++ G L EAR+ F+
Sbjct: 411 FTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFEL 470
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D+VSWNAI+ GY Q+ +Y EA M+ G+ D VS S SAC + + L+
Sbjct: 471 MKIHDNVSWNAIIVGYVQE-EYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKR 529
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+Q H + +K+G T G+ L+ Y KC V A VF M RNV+S +I+
Sbjct: 530 GQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM 589
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS-V 292
+ E+A+ LF+E+++ G+ P +VTF GL+ ++ GR IHG +K FLS V
Sbjct: 590 GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMV 649
Query: 293 CNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
C L+ +Y + DSE +F EL + ++ W ALISGYAQ A+Q F+ ++
Sbjct: 650 CVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQ-FYQHMRSD 708
Query: 352 K--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ F SVL A SL++GQ HS I G + D + S+L+DMY K G +
Sbjct: 709 NILPDQAAFASVLRACAGMS--SLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVK 766
Query: 410 ESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S +VF E ++ +W ++I LA++G E + FK+ME + + PD +TFL VL+ C
Sbjct: 767 GSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSAC 826
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G + +GR +FD M+ +Y ++P DH CMVD+LGR G L EAEE + ++ +
Sbjct: 827 SHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPML 886
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LLGACR HG+ G+R AD LM+++P S SYVL+S++YAE +W LR+ MK
Sbjct: 887 WSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKL 946
Query: 589 KGVRKEVGFSWADVG 603
KGV+K G+SW + G
Sbjct: 947 KGVKKLPGYSWIEPG 961
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 265/534 (49%), Gaps = 20/534 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+N Y G+ A +F + NP++V+WN ++SG K +++A+SF L + G+
Sbjct: 250 VNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATR 309
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + LS +G +H+ K GLD VYVG+AL+ MY++ ++ A++VF+
Sbjct: 310 SSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNS 369
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ V WNA+L G+ Q+G E + M R G + D +FTS SAC L
Sbjct: 370 LGERNIVLWNAMLGGFAQNG-LAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNF 428
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G Q+H V IK + +++ V N L+ Y+K +A K F M + +SW +I
Sbjct: 429 GGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQ 488
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++A +F+ M +GV P++V+ ++ A + +K G+ H L +K +
Sbjct: 489 EEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCA 548
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
+ LI MY + + + VF + R ++S NALI+GY L A+ F + +
Sbjct: 549 GSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHLE-EAIHLFQEIQMVGL 607
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFE 410
KP TF +L+ A ++L G++ H ++K G L S +V +LL +Y +
Sbjct: 608 KPTEVTFAGLLDGCDGAFMLNL--GRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVD 665
Query: 411 SQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
S+ +F+E Q K WTA+IS A+ +E + ++ M + + PD F SVL C
Sbjct: 666 SETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACA 725
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIP 521
+ G+ + + +H + D +C ++DM + G ++ + ++ ++P
Sbjct: 726 GMSSLQNGQEIHSLI---FHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMP 776
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 145/540 (26%), Positives = 257/540 (47%), Gaps = 54/540 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIG-----VVF 55
+++Y K G D A F+ L D+ +WN+VLS + D L + + + V
Sbjct: 83 VDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMY--LDHGLFATVVQSFVCMWNHEVRP 140
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T++ LS C + FG Q+H + K G + LI MY++ L +AR VF
Sbjct: 141 NEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVF 200
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D N D+VSW A+++GY +DG + +EA+ M R G D ++ + +A
Sbjct: 201 DGALNLDTVSWTALIAGYVRDG-FPMEAVKVFDRMQRVGHAPDQITLVTVVNA------- 252
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+V++G + DA K+F ++ + NV++W MIS +
Sbjct: 253 -----------------YVALGRL-----------ADARKLFTQIPNPNVVAWNVMISGH 284
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E+A+S F E++ G+ + ++ AI+ +++ G M+H K
Sbjct: 285 AKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNV 344
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + L+ MYA+ M +++VF+ L R I+ WNA++ G+AQNGL+ V FF +K
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLA-QEVMEFFSCMKR 403
Query: 351 --SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+P+ +TF S+ +A + L G + H+ +IK S+ V +AL+DMY K G++
Sbjct: 404 HGPQPDEFTFTSIFSACASLH--YLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGAL 461
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E+++ F + +W AII + + F+ M + GV PD ++ S+++ C
Sbjct: 462 KEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSAC 521
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+ +G+ +L ++ S S ++DM + G + A ++ +P +SV
Sbjct: 522 ANVQELKRGQQC-HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSV 580
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 212/444 (47%), Gaps = 47/444 (10%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+HS +K G+ + +GN ++ +Y + G + A++ F + KD +WN++LS Y G
Sbjct: 63 IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+ + + + M +R + +F SAC +++ G+Q+H K G+G
Sbjct: 123 FAT-VVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQG 181
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCP 253
L+ Y+KC DA VF + + +SWT +I+ D AV +F M+ G P
Sbjct: 182 GLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAP 241
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+ +T + +++A Y + D+ K+F
Sbjct: 242 DQITLVTVVNA-----------------------------------YVALGRLADARKLF 266
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDI 371
++ +++WN +ISG+A+ G + A+ +FF +K++ K + GSVL+A+ +
Sbjct: 267 TQIPNPNVVAWNVMISGHAKRGFAEEAI-SFFLELKKTGLKATRSSLGSVLSAIASLS-- 323
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
L +G H+ K GLD + VGSAL++MY K + +++VFN E++ W A++
Sbjct: 324 MLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A++G + VM F M+ G +PD TF S+ + C ++ G L M+K+
Sbjct: 384 GFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKN-KFA 442
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEE 515
+ + +VDM + G L+EA +
Sbjct: 443 SNLFVANALVDMYAKSGALKEARK 466
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 162/367 (44%), Gaps = 47/367 (12%)
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L K IH S+K+G G +GNV++ Y KC A K F R+ ++V +W +++SM
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116
Query: 235 NREDAVSLFKEMRLDGVC-------PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ LF + VC PN+ TF ++ A S V GR +H KT F
Sbjct: 117 YLDHG--LFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
LI MYA+ ++D+ VFD + +SW ALI+GY ++G + AV+ F
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVF--- 231
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ +VG D I +++ Y G
Sbjct: 232 ---------------------------------DRMQRVGHAPDQITLVTVVNAYVALGR 258
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +++++F + + AW +IS A+ G E ++ F E++ G++ + SVL+
Sbjct: 259 LADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSA 318
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
M++ G + K+ ++ + S +V+M + +++ A+++ + G +
Sbjct: 319 IASLSMLNYGSMVHAQATKE-GLDDNVYVGSALVNMYAKCSKMDAAKQVFNSL-GERNIV 376
Query: 528 VLQSLLG 534
+ ++LG
Sbjct: 377 LWNAMLG 383
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 125/265 (47%), Gaps = 13/265 (4%)
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
++IH +K + + N ++ +Y + ++ ++K F L +++ +WN+++S Y
Sbjct: 60 AKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLD 119
Query: 334 NGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
+GL VQ+F + E +PN +TF VL+A +D++ G++ H + K G
Sbjct: 120 HGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNF--GRQVHCGVFKTGFGFRS 177
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
L+DMY K + +++ VF+ +WTA+I+ R G + F M+
Sbjct: 178 FCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRV 237
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD--HYSCMVDMLGRVGRL 510
G PD IT ++V+ G + R LF + P+P+ ++ M+ + G
Sbjct: 238 GHAPDQITLVTVVNAYVALGRLADARKLFTQI-------PNPNVVAWNVMISGHAKRGFA 290
Query: 511 EEAEELVGQIPGGPGLSVLQSLLGA 535
EEA ++ GL +S LG+
Sbjct: 291 EEAISFFLELK-KTGLKATRSSLGS 314
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/656 (34%), Positives = 372/656 (56%), Gaps = 33/656 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIG-VVFD 56
+N+Y G + F+ + D+ +WN+++S + ++ +A+ ++ L+ D
Sbjct: 115 VNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQAD 174
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ L C + + G ++H + K G +V+V +LI MYSR+G + AR +FD
Sbjct: 175 FYTFPPVLKAC---QTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFD 231
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+MP +D SWNA++SG Q+G+ +A+ L EM +G+ +D V+ S C ++
Sbjct: 232 DMPFRDMGSWNAMISGLIQNGN-AAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDIS 290
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
IH IK G + V N L++ Y+K GDA KVF++M R+V+SW ++I+
Sbjct: 291 TATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYE 350
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ A F +M+L+G+ P+ +T + L + K R +HG ++ +L E
Sbjct: 351 QNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAV 410
Query: 292 VC-NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVI 348
V N ++ MYA+ + + KVF+ + ++++SWN LISGY QNGL+ A++ +
Sbjct: 411 VIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEEC 470
Query: 349 KESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+E K N T+ S+L A VGA L+ G R H H+IK L D VG+ L+D+YGK
Sbjct: 471 REIKLNQGTWVSILAAYAHVGA-----LQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKC 525
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++ +F + +S W AIIS HG E + F+EM+++GV+PD +TF+S+L
Sbjct: 526 GRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLL 585
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C +G++ +G+ F ++++Y I+PS HY CMVD+LGR G LE A + + +P P
Sbjct: 586 SACSHSGLVDEGKWFF-HLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPD 644
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
S+ +LLGACRIHGN+E+G+ +D L +++ G YVL+SN+YA G WE V +R
Sbjct: 645 ASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSL 704
Query: 586 MKSKGVRKEVGFSWADVG---DIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+ +G++K G+S +V DI F +G+ +HP+ +EIY L ++MK L
Sbjct: 705 ARERGLKKTPGWSSIEVNRRVDI-----FYTGNQSHPKCKEIYAELRILTAKMKSL 755
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 251/497 (50%), Gaps = 24/497 (4%)
Query: 74 LFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGY 133
L +LH+L+V G ++ L+ +Y+ G + +R FD++ KD +WN+++S Y
Sbjct: 90 LLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAY 149
Query: 134 TQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
++G + EAI +++ + D +F AC + L G++IH K+G+
Sbjct: 150 VRNGHFR-EAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTLVDGRKIHCWVFKLGFQW 205
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMR 247
V V L+ YS+ G A +F M R++ SW MIS N A+ + EMR
Sbjct: 206 DVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR 265
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
L+G+ + VT ++ + + +IH IK E V N LI MYA+F ++
Sbjct: 266 LEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLG 325
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVG 366
D++KVF ++ R+++SWN++I+ Y QN + A FF + + +P+ T S+ A
Sbjct: 326 DAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSL--ASI 383
Query: 367 AAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
AA+ K+ + H I++ G L ++G+A++DMY K G I + +VFN K +
Sbjct: 384 AAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVS 443
Query: 426 WTAIISALARHGDYESVMNQFKEMEN-KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W +IS ++G + ++ ME + ++ + T++S+L G + +G + +
Sbjct: 444 WNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHL 503
Query: 485 LK-DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR-IHGNV 542
+K + H++ +C++D+ G+ GRL +A L Q+P SV + + +C IHG+
Sbjct: 504 IKTNLHLDVFVG--TCLIDLYGKCGRLVDAMCLFYQVPRES--SVPWNAIISCHGIHGH- 558
Query: 543 EMGERIADALMKMEPAG 559
GE+ +M+ G
Sbjct: 559 --GEKALKLFREMQDEG 573
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 132/339 (38%), Gaps = 73/339 (21%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS--GFE-KSDDALSFALRMNLIGVVFDA 57
+++Y K G+ A+C+F + V WN ++S G + AL M GV D
Sbjct: 519 IDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDH 578
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT+ + LS C H G + G L+ ++G+ + ++ + R G L A
Sbjct: 579 VTFISLLSAC-SHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIK 637
Query: 117 EMP-NKDSVSWNAILSG----------------------------------YTQDGDY-G 140
+MP + D+ W A+L Y G + G
Sbjct: 638 DMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEG 697
Query: 141 VEAILAL--------------IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSI 186
V+ + +L IE+ R R+D + +T S H K E+ ++ ++
Sbjct: 698 VDKVRSLARERGLKKTPGWSSIEVNR---RVD-IFYTGNQS---HPKCKEIYAELRILTA 750
Query: 187 KMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEM 246
KM S+G + ++ +V D + H + +IS + A+ +FK +
Sbjct: 751 KMK-----SLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNL 805
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH----GLC 281
R+ G C N FI I I +V++ + H G+C
Sbjct: 806 RVCGDCHNATKFISRITEREI--VVRDSKRFHHFKNGIC 842
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/647 (32%), Positives = 362/647 (55%), Gaps = 14/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K + D +L IF+ + + V W+ +++G ++D+ L M +G+
Sbjct: 218 LDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQ 277
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y++ C G QLH+ +K S++ VG A + MY++ G L +A+R+F+
Sbjct: 278 SIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNS 337
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P +NAI+ G ++ + G EA+ +++ GL + +S + A SAC K
Sbjct: 338 LPKHSLQCYNAIIVGCVRN-EKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLD 396
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+Q+H +S+K +++ V N ++ Y KCE +A +F M R+ +SW +I+
Sbjct: 397 GRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQ 456
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N E+ ++LF M + P+ T+ ++ A S + G IH IK+ + V
Sbjct: 457 NGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFV 516
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
LI MY + +++++K+ D + + ++SWNA+I+G+ S A F+ ++K S
Sbjct: 517 GGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSV 576
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+ +T+ VL+A + L G++ H IIK+ L SD + S L+DMY K G++ +S
Sbjct: 577 KPDNFTYAIVLDACANLASVGL--GKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDS 634
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
VF + K W A+I A+HG E + F+ M+ + VRP+ TF+S+L C
Sbjct: 635 ALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHM 694
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G I KG H F++ML +Y +EP +HYSCM+D++GR GR+ EA +L+ ++P + ++
Sbjct: 695 GFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRT 754
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL C+IHGN+E+ E+ +A++++EP S + +L+SN+YA+ G W V+ +RK M+ +
Sbjct: 755 LLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKL 814
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+KE G SW +V D +H F G+ THPR EEIY++ L EMK++
Sbjct: 815 KKEPGCSWIEVK--DEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWI 859
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/532 (28%), Positives = 278/532 (52%), Gaps = 22/532 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF------EKSDDALSFALRMNLIGVVFDA 57
Y +G+ + A F + D+VSWN++LSGF KS D R +G FD
Sbjct: 119 YADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVG--FDQ 176
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L C E G+Q+H LIV+ G +V G+AL+ MY++ RL ++ ++F E
Sbjct: 177 TTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSE 236
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P K+ V W+AI++G Q+ ++ + + EM + G+ + + S +C L++
Sbjct: 237 IPVKNWVCWSAIIAGCVQNDEH-ILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKV 295
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--SMN 235
G Q+H ++K +G+ ++VG + Y+KC DA ++F + ++ + +I +
Sbjct: 296 GTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVR 355
Query: 236 RE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E +A+ F+ + G+ N+++ G A + +GR +H L +K+ S V
Sbjct: 356 NEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICV 415
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ES 351
N ++ MY + E++ ++ +FDE+ R+ +SWNA+I+ + QNG + F +++
Sbjct: 416 ANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRM 475
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ +T+GSVL A + + +L G H+ IIK GL D VG AL+DMY K G I E+
Sbjct: 476 EPDQFTYGSVLKACSSQQ--ALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEA 533
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+++ + ++++ +W AII+ E + F EM V+PD+ T+ VL C
Sbjct: 534 KKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANL 593
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
+ G+ + ++K +E D Y S +VDM + G ++++ + + P
Sbjct: 594 ASVGLGKQIHGQIIK---LELHSDVYITSTLVDMYSKCGNMQDSALVFEKAP 642
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 250/503 (49%), Gaps = 48/503 (9%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+S + C D+ G Q H+ ++ G +VY+ N L+ MY R L A +VF++M
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 119 -------------------------------PNKDSVSWNAILSGYTQDGDYGVEAILAL 147
P +D VSWN++LSG+ Q+G+ ++I
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECR-KSIDVF 163
Query: 148 IEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
++M R + + D +F AC ++ LG Q+HG+ ++MG+ V G+ L+ Y+K
Sbjct: 164 LDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAK 223
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEMRLDGVCPNDVTFIGL 261
C+ D+ K+F + +N + W+ +I+ N E + LFKEM+ G+ + + +
Sbjct: 224 CKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASV 283
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
+ + + +K G +H +K +F S+ +V + MYA+ S+ D++++F+ L +
Sbjct: 284 FRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSL 343
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAE-DISLKHGQRC 379
+NA+I G +N A+Q F ++K N + +A + + D+ G++
Sbjct: 344 QCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLD---GRQL 400
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
HS +K L S+ V +++LDMYGK ++ E+ +F+E + + +W A+I+A ++G+
Sbjct: 401 HSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNE 460
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY-- 497
E +N F M + PD T+ SVL C ++ G + + ++K D +
Sbjct: 461 EETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKS---GLGLDSFVG 517
Query: 498 SCMVDMLGRVGRLEEAEELVGQI 520
++DM + G +EEA+++ +I
Sbjct: 518 GALIDMYCKCGMIEEAKKIHDRI 540
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 234/647 (36%), Positives = 355/647 (54%), Gaps = 16/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY K D A +F+ ++ +++ WN +L + ++ + + L M G+ D
Sbjct: 259 INMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDE 318
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY++ LS C E G QLHS I+K S ++V NALI MY++ G L EA + F+
Sbjct: 319 FTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEH 378
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D +SWNAI+ GY Q+ + A M+ G+ D VS S SACG+ K LE
Sbjct: 379 MTYRDHISWNAIIVGYVQE-EVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEA 437
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+Q H +S+K+G T++ G+ L+ YSKC DA+K + M +R+V+S +I+
Sbjct: 438 GQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYAL 497
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
N +++++L EM++ G+ P+++TF LI V G IH +K L
Sbjct: 498 KNTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFL 557
Query: 294 -NCLITMYARFESMQDSEKVFDELSC-REIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
L+ MY + + D+ +F E S + I+ W ALISG+ QN S A+ + + +
Sbjct: 558 GTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNN 617
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ TF +VL A SL G+ HS I G D D + SAL+DMY K G +
Sbjct: 618 ISPDQATFVTVLQACALLS--SLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKS 675
Query: 411 SQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
S +VF E K + +W ++I A++G + + F EM + PD +TFL VLT C
Sbjct: 676 SVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACS 735
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G +++GR +FD M+ Y IEP DHY+CMVD+LGR G L+EAEE + ++ P +
Sbjct: 736 HAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIW 795
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+LLGACRIHG+ + G+R A L+++EP S YVL+SN+YA G+W+ LR+ M K
Sbjct: 796 ANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKK 855
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++K G SW VG L F +GD +H +EI + + L + +K
Sbjct: 856 DIQKIPGCSWIVVGQETNL--FVAGDISHSSYDEISKALKHLTALIK 900
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 152/536 (28%), Positives = 278/536 (51%), Gaps = 24/536 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP--DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVF 55
+N Y G+ D A +F + P ++V+WN ++SG K+ ++AL+F +M+ GV
Sbjct: 156 LNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKS 215
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T ++ LS GL +H+ +K G +S +YV ++LI MY + +AR+VF
Sbjct: 216 SRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVF 275
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D + K+ + WNA+L Y+Q+G + + ++M+ G+ D ++TS S C + L
Sbjct: 276 DAISQKNMIVWNAMLGVYSQNG-FLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYL 334
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E+G+Q+H IK + +++ V N L+ Y+K +A K F M R+ ISW +I
Sbjct: 335 EVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGY 394
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++ A SLF+ M LDG+ P++V+ ++ A +++ G+ H L +K +
Sbjct: 395 VQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNL 454
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA----QNGLSLAAVQAFFG 346
+ LI MY++ ++D+ K + + R ++S NALI+GYA + ++L G
Sbjct: 455 FAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKESINLLHEMQILG 514
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKR 405
+ KP+ TF S+++ + + L G + H I+K G L +G++LL MY
Sbjct: 515 L----KPSEITFASLIDVCKGSAKVIL--GLQIHCAIVKRGLLCGSEFLGTSLLGMYMDS 568
Query: 406 GSIFESQRVFNE-TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
+ ++ +F+E + KS WTA+IS ++ + +N ++EM + + PD TF++V
Sbjct: 569 QRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTV 628
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
L C +H GR + S++ + S +VDM + G ++ + ++ ++
Sbjct: 629 LQACALLSSLHDGREI-HSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEEL 683
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 240/513 (46%), Gaps = 52/513 (10%)
Query: 28 WNTVLSGFE--KSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVK 85
WN + G + S+ L F G D T++ LS C + G +HS ++K
Sbjct: 16 WNWRVQGTKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIK 75
Query: 86 FGLDSEVYVGNALITMYSRWGRLVEARRVFDE--MPNKDSVSWNAILSGYTQDGDYGVEA 143
GL+S + ALI +Y++ L AR +F P+ +VSW A++SGY Q G EA
Sbjct: 76 SGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAG-LPHEA 134
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
L + + MR D V+ + +A ++S+G +
Sbjct: 135 -LHIFDKMRNSAVPDQVALVTVLNA------------------------YISLGKL---- 165
Query: 204 YSKCEVTGDANKVFRRM--HDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDV 256
DA ++F++M RNV++W MIS + E+A++ F +M GV +
Sbjct: 166 -------DDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRS 218
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T ++ AI+ + G ++H IK F S V + LI MY + + D+ +VFD +
Sbjct: 219 TLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAI 278
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKH 375
S + +I WNA++ Y+QNG ++ F +I P+ +T+ S+L+ E L+
Sbjct: 279 SQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFE--YLEV 336
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G++ HS IIK S+ V +AL+DMY K G++ E+ + F + +W AII +
Sbjct: 337 GRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQ 396
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
+ F+ M G+ PD ++ S+L+ CG ++ G+ F + +E +
Sbjct: 397 EEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQ-FHCLSVKLGLETNLF 455
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
S ++DM + G +++A + +P +SV
Sbjct: 456 AGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSV 488
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/637 (35%), Positives = 369/637 (57%), Gaps = 19/637 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY KSG D A +F+ + DI SW ++ G + +A S L+M G + +
Sbjct: 173 VHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNL 232
Query: 58 VTYSTAL-SFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
TY + L + + G L + ++H K G S++ VGNALI MY++ G + +AR VF
Sbjct: 233 TTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVF 292
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D M ++D +SWNA++ G Q+G G EA ++M ++G D ++ S +
Sbjct: 293 DGMCDRDVISWNAMIGGLAQNG-CGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAW 351
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
E K++H ++++G + + VG+ + Y +C DA +F ++ RNV +W MI
Sbjct: 352 EWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGV 411
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
RE A+SLF +MR +G P+ TF+ ++ A ++ + +H I L +
Sbjct: 412 AQQKCGRE-ALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAG-LVD 469
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V N L+ MYA+ + +++VFD++ R + +W +ISG AQ+G A F +++
Sbjct: 470 LRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLR 529
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E P+A T+ S+L+A A +L+ + HSH + GL SD VG+AL+ MY K GS+
Sbjct: 530 EGIVPDATTYVSILSA--CASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSV 587
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+++RVF++ E+ ++WT +I LA+HG ++ F +M+ +G +P+ +F++VL+ C
Sbjct: 588 DDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSAC 647
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +GR F S+ +DY IEP+ +HY+CMVD+LGR G+LEEA+ + +P PG +
Sbjct: 648 SHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAP 707
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LLGAC +GN+EM E A +K++P + +YVL+SN+YA G+WE ++R M+
Sbjct: 708 WGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQR 767
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+G+RKE G SW +V + +H F GD +HP S+EIY
Sbjct: 768 RGIRKEPGRSWIEVD--NQIHSFVVGDTSHPESKEIY 802
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/488 (32%), Positives = 263/488 (53%), Gaps = 21/488 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
+NMY K G D A IF+ + +++SW ++ G + + +A L+M G + ++
Sbjct: 72 VNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNS 131
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY + L+ + ++HS V GL ++ VGNAL+ MY++ G + +AR VFD
Sbjct: 132 YTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDG 191
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA--ASACGHEKNL 175
M +D SW ++ G Q G G EA ++M R G + ++ S ASA L
Sbjct: 192 MVERDIFSWTVMIGGLAQHGR-GQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGAL 250
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E K++H + K G+ + + VGN L+ Y+KC DA VF M DR+VISW MI
Sbjct: 251 EWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGL 310
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHA-ISIG--NLVKEGRMIHGLCIKTNFL 287
+ +A ++F +M+ +G P+ T++ L++ +S G VKE +H ++ +
Sbjct: 311 AQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKE---VHKHAVEVGLV 367
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S+ V + + MY R S+ D++ +FD+L+ R + +WNA+I G AQ A+ F +
Sbjct: 368 SDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQM 427
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+E P+A TF ++L+A E +L+ + HS+ I GL D VG+AL+ MY K G
Sbjct: 428 RREGFFPDATTFVNILSANVGEE--ALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCG 484
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ +++VF++ E++ WT +IS LA+HG + F +M +G+ PD+ T++S+L+
Sbjct: 485 NTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILS 544
Query: 467 VCGRNGMI 474
C G +
Sbjct: 545 ACASTGAL 552
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/443 (31%), Positives = 236/443 (53%), Gaps = 23/443 (5%)
Query: 38 SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNA 97
++DA+ +M G + +TY + L C +G ++H+ I++ G S+V V A
Sbjct: 11 AEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETA 70
Query: 98 LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL 157
L+ MY + G + +A+ +FD+M ++ +SW ++ G G G EA ++M R+G
Sbjct: 71 LVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGR-GQEAFHRFLQMQREGFIP 129
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
+ ++ S +A LE K++H ++ G + VGN L+ Y+K DA VF
Sbjct: 130 NSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVF 189
Query: 218 RRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL-- 270
M +R++ SWT MI ++A SLF +M G PN T++ +++A +I +
Sbjct: 190 DGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGA 249
Query: 271 ---VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
VKE +H K F+S+ V N LI MYA+ S+ D+ VFD + R++ISWNA+
Sbjct: 250 LEWVKE---VHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAM 306
Query: 328 ISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLN---AVGAAEDISLKHGQRCHSHI 383
I G AQNG A F + +E P++ T+ S+LN + GA E + + H H
Sbjct: 307 IGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWV-----KEVHKHA 361
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
++VGL SD VGSA + MY + GSI ++Q +F++ ++ W A+I +A+ +
Sbjct: 362 VEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREAL 421
Query: 444 NQFKEMENKGVRPDSITFLSVLT 466
+ F +M +G PD+ TF+++L+
Sbjct: 422 SLFLQMRREGFFPDATTFVNILS 444
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 182/343 (53%), Gaps = 7/343 (2%)
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
++ GY + G Y +A+ +M R+G + + +++ S AC +L+ GK+IH I+
Sbjct: 1 MIGGYAEYG-YAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQS 59
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLF 243
G+ + V V L++ Y KC DA +F +M +RNVISWT MI ++A F
Sbjct: 60 GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
+M+ +G PN T++ +++A + ++ + +H + + V N L+ MYA+
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVL 362
S+ D+ VFD + R+I SW +I G AQ+G A F + + PN T+ S+L
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
NA +L+ + H H K G SD VG+AL+ MY K GSI +++ VF+ ++
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
+W A+I LA++G F +M+ +G PDS T+LS+L
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLL 342
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 182/363 (50%), Gaps = 30/363 (8%)
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
EDA+ ++ +MR +G PN++T++ ++ A +K G+ IH I++ F S+ V L
Sbjct: 12 EDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETAL 71
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
+ MY + S+ D++ +FD++ R +ISW +I G A G A F + +E PN+
Sbjct: 72 VNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNS 131
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
YT+ S+LNA +A +L+ + HSH + GL D VG+AL+ MY K GSI +++ VF
Sbjct: 132 YTYVSILNANASAG--ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVF 189
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG--RNGM 473
+ E+ F+WT +I LA+HG + + F +ME G P+ T+LS+L G
Sbjct: 190 DGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGA 249
Query: 474 I--------HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ H G+ F S L+ + ++ M + G +++A + +
Sbjct: 250 LEWVKEVHKHAGKAGFISDLRV---------GNALIHMYAKCGSIDDARLVFDGMCDRDV 300
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAG----SGSYVLMSNLYAEKGDWEMVAI 581
+S +++G +G G +KM+ G S +Y+ + N + G WE V
Sbjct: 301 IS-WNAMIGGLAQNG---CGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKE 356
Query: 582 LRK 584
+ K
Sbjct: 357 VHK 359
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 46/251 (18%)
Query: 327 LISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
+I GYA+ G + A++ + + +E +PN T+ S+L A +SLK G++ H+HII+
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKA--CCSPVSLKWGKKIHAHIIQ 58
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
G SD V +AL++MY K GSI ++Q +F++ E++ +WT +I LA +G + ++
Sbjct: 59 SGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHR 118
Query: 446 FKEMENKGVRPDSITFLSVLT-----------------------------------VCGR 470
F +M+ +G P+S T++S+L + +
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG---PGLS 527
+G I R +FD M +E ++ M+ L + GR +EA L Q+ G P L+
Sbjct: 179 SGSIDDARVVFDGM-----VERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLT 233
Query: 528 VLQSLLGACRI 538
S+L A I
Sbjct: 234 TYLSILNASAI 244
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/647 (33%), Positives = 364/647 (56%), Gaps = 14/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K + D ++ F+++ + VSW+ +++G ++DD L M GV
Sbjct: 216 LDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQ 275
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ C G QLH +K ++V +G A + MY + L +A+++F+
Sbjct: 276 STFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNS 335
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+PN + S+NAI+ GY + D G+EA+ + + GL LD VS + A AC K
Sbjct: 336 LPNHNLQSYNAIIVGYAR-SDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE 394
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G Q+HG+S+K +++ V N ++ Y KC +A VF M R+ +SW +I+
Sbjct: 395 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 454
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N E +SLF M G+ P++ T+ ++ A + + G IH IK+ + V
Sbjct: 455 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFV 514
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
LI MY++ M+ +EK+ D L+ + ++SWNA+ISG++ S A + F +++
Sbjct: 515 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 574
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P+ +T+ ++L+ A ++++ G++ H+ IIK L SD + S L+DMY K G++ +
Sbjct: 575 DPDNFTYATILDT--CANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDF 632
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
Q +F + + W A++ A+HG E + F+ M+ + V+P+ TFL+VL CG
Sbjct: 633 QLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHM 692
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ KG H F SML +Y ++P +HYSC+VD++GR G++ +A EL+ +P + ++
Sbjct: 693 GLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRT 752
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL C+IHGNVE+ E+ A +++++EP S +YVL+SN+YA G W V LRK M+ G+
Sbjct: 753 LLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGL 812
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+KE G SW ++ +H F GD HPRS+EIY + L EMK++
Sbjct: 813 KKEPGCSWIEIK--SEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWV 857
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 277/531 (52%), Gaps = 21/531 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTY 60
Y G A +F+ + D+VSWN+++SG+ + D + L+M +G VFD T+
Sbjct: 118 YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTF 177
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ L C E G+Q+H L VK G D +V G+AL+ MY++ +L + + F MP
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPE 237
Query: 121 KDSVSWNAILSGYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K+ VSW+AI++G Q+ D G+E EM + G+ + +F S +C L LG
Sbjct: 238 KNWVSWSAIIAGCVQNDDLRGGLE---LFKEMQKAGVGVSQSTFASVFRSCAGLSALRLG 294
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNRE 237
Q+HG ++K +GT V +G + Y KC DA K+F + + N+ S+ +I R
Sbjct: 295 SQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS 354
Query: 238 D----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
D A+ +F+ ++ G+ ++V+ G A ++ EG +HGL +K+ S V
Sbjct: 355 DKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVA 414
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N ++ MY + ++ ++ VF+E+ R+ +SWNA+I+ + QNG + F +++ +
Sbjct: 415 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGME 474
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ +T+GSVL A + +L G H+ IIK L D VG AL+DMY K G + +++
Sbjct: 475 PDEFTYGSVLKACAGWQ--ALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAE 532
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
++ + E++ +W AIIS + E F +M GV PD+ T+ ++L C
Sbjct: 533 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 592
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
+ G+ + ++K E D Y S +VDM + G +++ + + + P
Sbjct: 593 TVELGKQIHAQIIKK---ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 640
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 247/503 (49%), Gaps = 57/503 (11%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR-------------- 104
T+S C D + G Q H+ ++ V+V N LI MY +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 105 -------W----------GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
W G + A+++FD MP +D VSWN+++SGY +GD+ + I
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHR-KVIDVF 162
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
++M R G D +F +C ++ G QIHG+++KMG+ V G+ L+ Y+KC
Sbjct: 163 LQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC 222
Query: 208 EVTGDANKVFRRMHDRNVISWTTMIS--MNRED---AVSLFKEMRLDGVCPNDVTFIGLI 262
+ + + F M ++N +SW+ +I+ + +D + LFKEM+ GV + TF +
Sbjct: 223 KKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVF 282
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
+ + + ++ G +HG +KT+F ++ + + MY + ++ D++K+F+ L +
Sbjct: 283 RSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ 342
Query: 323 SWNALISGYAQNGLSLAAVQAF-------FGVIKESKPNAYTFGSVLNAVGAAEDISLKH 375
S+NA+I GYA++ + A+ F G+ + S A+ +V+ D+
Sbjct: 343 SYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKG-----DL---E 394
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G + H +K S+ V +A+LDMYGK G++ E+ VF E + +W AII+A +
Sbjct: 395 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 454
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
+G+ E ++ F M G+ PD T+ SVL C ++ G + + ++K D
Sbjct: 455 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKS---RLGLD 511
Query: 496 HYS--CMVDMLGRVGRLEEAEEL 516
+ ++DM + G +E+AE+L
Sbjct: 512 SFVGIALIDMYSKCGMMEKAEKL 534
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/652 (35%), Positives = 370/652 (56%), Gaps = 28/652 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA----LSFALRMNLIGVVFD 56
+N+YC G A F+++ N D+ +WN ++SG+ ++ ++ F+L M G+ D
Sbjct: 93 VNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPD 152
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ + L C + G ++H L +KFG +VYV +LI +YSR+ + AR +FD
Sbjct: 153 YRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFD 209
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNL 175
EMP +D SWNA++SGY Q G+ EA+ + GLR +D V+ S SAC +
Sbjct: 210 EMPVRDMGSWNAMISGYCQSGN-AKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDF 263
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
G IH SIK G + + V N L+ Y++ D KVF RM+ R++ISW ++I
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 234 -MNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN-FLSE 289
+N + A+SLF+EMRL + P+ +T I L +S ++ R + G ++ FL +
Sbjct: 324 ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
++ N ++ MYA+ + + VF+ L ++ISWN +ISGYAQNG + A++ + +++
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE-MYNIME 442
Query: 350 ES---KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
E N T+ SVL A A +L+ G + H ++K GL D V ++L DMYGK G
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAG--ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ ++ +F + + W +I+ HG E + FKEM ++GV+PD ITF+++L+
Sbjct: 501 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G++ +G+ F+ M DY I PS HY CMVDM GR G+LE A + + + P
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
S+ +LL ACR+HGNV++G+ ++ L ++EP G +VL+SN+YA G WE V +R
Sbjct: 621 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIA 680
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
KG+RK G+S +V + + F +G+ THP EE+YR L +++K +
Sbjct: 681 HGKGLRKTPGWSSMEVD--NKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 157/553 (28%), Positives = 254/553 (45%), Gaps = 47/553 (8%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTAL 64
CK G+F + L S +V+ F S +AL + D V T
Sbjct: 15 CKGGRFTRVL-----------QSIGSVIREFSASANALQDCWKNGNESKEIDDV--HTLF 61
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
+C + + LH+ +V V + L+ +Y G + AR FD + N+D
Sbjct: 62 RYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
+WN ++SGY + G+ + M+ GL D+ +F S AC + + G +IH +
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCL 175
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDA 239
++K G+ V V L+ YS+ + G+A +F M R++ SW MI S N ++A
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
++L +R + VT + L+ A + G IH IK SE V N LI +
Sbjct: 236 LTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTF 358
YA F ++D +KVFD + R++ISWN++I Y N L A+ F + + +P+ T
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
S+ + + DI + + ++ G D +G+A++ MY K G + ++ VFN
Sbjct: 352 ISLASILSQLGDI--RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLSVLTVCGRNGMIHK 476
+W IIS A++G + + ME +G + + T++SVL C + G + +
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 477 GRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G L +LK D + S + DM G+ GRLE+A L QIP SV +
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTS------LADMYGKCGRLEDALSLFYQIPRVN--SVPWN 521
Query: 532 LLGACR-IHGNVE 543
L AC HG+ E
Sbjct: 522 TLIACHGFHGHGE 534
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 132/338 (39%), Gaps = 56/338 (16%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS--GFE-KSDDALSFALRMNLIGVVFDAV 58
+MY K G+ + AL +F + + V WNT+++ GF + A+ M GV D +
Sbjct: 494 DMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI 553
Query: 59 TYSTALSFCLDHEGFLFGLQ--LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ T LS C H G + Q + +G+ + ++ MY R G+L A +
Sbjct: 554 TFVTLLSAC-SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 117 EMP-NKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
M D+ W A+LS G D G A L E+ + + HV ++ ++ G +
Sbjct: 613 SMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY-HVLLSNMYASAGKWE 671
Query: 174 NLELGKQI-HGVSIKMGYG-THVSVGNVLMSTYSKCEVTGDANKVFRRM----------- 220
++ + I HG ++ G + + V N + Y+ + +++R +
Sbjct: 672 GVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIG 731
Query: 221 -----------------------HDRNVISWTTMISMNREDAVSLFKEMRLDGVCPNDVT 257
H + +I+ + + +FK +R+ G C +
Sbjct: 732 YVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTK 791
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
FI I I +V++ H + VC+C
Sbjct: 792 FISKITEREI--IVRDSNRFHHF--------KNGVCSC 819
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/631 (34%), Positives = 368/631 (58%), Gaps = 15/631 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y K+G ++A +F+ L+ V+W T+++G+ K S +L +M VV D
Sbjct: 171 IDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDR 230
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS C E G Q+H+ +++ G + +V V N LI Y++ R+ R++FD+
Sbjct: 231 YVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQ 290
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ +SW ++SGY Q+ + EA+ EM R G + D + TS ++CG + LE
Sbjct: 291 MVVKNIISWTTMISGYMQNS-FDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQ 349
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+Q+H +IK + V N L+ Y+K + DA KVF M ++NVIS+ MI
Sbjct: 350 GRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSS 409
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF EMR+ P+ +TF+ L+ + ++ + IHGL IK +
Sbjct: 410 QEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFA 469
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
+ LI +Y++ ++D+ VF+E++ ++I+ WNA+ GY Q+ + A++ + +
Sbjct: 470 GSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQ 529
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN +TF +++ A A+ SL+HGQ+ H+ ++K+GLD P V +AL+DMY K GSI E+
Sbjct: 530 KPNEFTFAALITA--ASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEA 587
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+++FN + + W ++IS A+HG+ E + F+EM +G++P+ +TF++VL+ C
Sbjct: 588 RKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHA 647
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + G + F+SM + I+P +HY+C+V +LGR G+L EA+E + ++P P V +S
Sbjct: 648 GRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRS 706
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACRI GNVE+G+ A+ + +P SGSY+L+SN++A KG W V +R M S V
Sbjct: 707 LLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEV 766
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSE 622
KE G SW +V + ++ F + D TH ++
Sbjct: 767 VKEPGRSWIEVN--NKVNVFIARDTTHREAD 795
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 161/527 (30%), Positives = 276/527 (52%), Gaps = 16/527 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDAL-SFALRMNLIGVVFD 56
+N+ KS + D A +F+ + + ++++W++++S + + S++AL F G +
Sbjct: 69 INVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPN 128
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ + C G QLH +V+ G D +VYVG +LI YS+ G + EAR VFD
Sbjct: 129 EFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFD 188
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNL 175
++ K +V+W I++GYT+ G V L L MR+ + D +S SAC + L
Sbjct: 189 QLSEKTAVTWTTIIAGYTKCGRSAVS--LELFAQMRETNVVPDRYVVSSVLSACSMLEFL 246
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E GKQIH ++ G VSV NVL+ Y+KC K+F +M +N+ISWTTMIS
Sbjct: 247 EGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGY 306
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A+ LF EM G P+ ++ + +++GR +H IK N S+
Sbjct: 307 MQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDE 366
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
V N LI MYA+ + D++KVFD ++ + +IS+NA+I GY+ A++ F + ++
Sbjct: 367 FVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVR 426
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ TF S+L +A +L+ ++ H IIK G+ D GSAL+D+Y K +
Sbjct: 427 LFPPSLLTFVSLLGV--SASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVK 484
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++ VF E EK W A+ +H + E + + ++ +P+ TF +++T
Sbjct: 485 DARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAAS 544
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ G+ + ++K ++ P + +VDM + G +EEA ++
Sbjct: 545 NLASLRHGQQFHNQLVK-MGLDFCPFVTNALVDMYAKCGSIEEARKM 590
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 215/397 (54%), Gaps = 12/397 (3%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H I+ GL S+ ++ N LI + S+ R+ AR VFD+MP+K+ ++W++++S Y+Q G
Sbjct: 49 IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQG- 107
Query: 139 YGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
Y EA++ +++ RK G + S AC +E G Q+HG ++ G+ V VG
Sbjct: 108 YSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVG 167
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE---DAVS--LFKEMRLDGVC 252
L+ YSK +A VF ++ ++ ++WTT+I+ + AVS LF +MR V
Sbjct: 168 TSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVV 227
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ ++ A S+ ++ G+ IH ++ + SV N LI Y + ++ K+
Sbjct: 228 PDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKL 287
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAED 370
FD++ + IISW +ISGY QN A++ FG + KP+ + SVL + G+ E
Sbjct: 288 FDQMVVKNIISWTTMISGYMQNSFDWEAMK-LFGEMNRLGWKPDGFACTSVLTSCGSRE- 345
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+L+ G++ H++ IK L+SD V + L+DMY K + ++++VF+ E++ ++ A+I
Sbjct: 346 -ALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMI 404
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ + F EM + P +TF+S+L V
Sbjct: 405 EGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGV 441
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 188/347 (54%), Gaps = 14/347 (4%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
K IHG I G + + N+L++ SK + +A VF +M +N+I+W++M+SM
Sbjct: 47 KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 106
Query: 235 -NREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E+A+ +F ++ R G PN+ +I A + +V++G +HG +++ F + V
Sbjct: 107 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 166
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
LI Y++ +++++ VFD+LS + ++W +I+GY + G S +++ F ++E+
Sbjct: 167 GTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLE-LFAQMRETN 225
Query: 353 --PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ Y SVL+A E L+ G++ H+++++ G + D V + L+D Y K +
Sbjct: 226 VVPDRYVVSSVLSACSMLE--FLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKA 283
Query: 411 SQRVFNETQEKSEFAWTAIISALARHG-DYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++F++ K+ +WT +IS ++ D+E+ M F EM G +PD SVLT CG
Sbjct: 284 GRKLFDQMVVKNIISWTTMISGYMQNSFDWEA-MKLFGEMNRLGWKPDGFACTSVLTSCG 342
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ +GR + +K ++E + ++DM + L +A+++
Sbjct: 343 SREALEQGRQVHAYTIKA-NLESDEFVKNGLIDMYAKSNLLIDAKKV 388
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 137/280 (48%), Gaps = 11/280 (3%)
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
+++ + P F L+ N + ++IHG I + S+ + N LI + ++ +
Sbjct: 18 LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLN 363
+ ++ VFD++ + +I+W++++S Y+Q G S A+ F + ++S PN + SV+
Sbjct: 78 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 137
Query: 364 A---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
A +G E G + H +++ G D D VG++L+D Y K G+I E++ VF++ E
Sbjct: 138 ACTQLGVVEK-----GAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSE 192
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
K+ WT II+ + G + F +M V PD SVL+ C + G+ +
Sbjct: 193 KTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQI 252
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+L+ E + ++D + R++ +L Q+
Sbjct: 253 HAYVLRR-GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM 291
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 234/615 (38%), Positives = 347/615 (56%), Gaps = 16/615 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMY K + D A +FN+L +IV WN +L GF + + + + F M G D
Sbjct: 351 VNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDE 410
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ S C FG QLH++++K S ++V NAL+ MY++ G L EAR+ F+
Sbjct: 411 FTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFEL 470
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D+VSWNAI+ GY Q+ +Y EA M+ G+ D VS S SAC + + L+
Sbjct: 471 MKIHDNVSWNAIIVGYVQE-EYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKR 529
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+Q H + +K+G T G+ L+ Y KC V A VF M RNV+S +I+
Sbjct: 530 GQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM 589
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS-V 292
+ E+A+ LF+E+++ G+ P +VTF GL+ ++ GR IHG +K FLS V
Sbjct: 590 GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMV 649
Query: 293 CNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
C L+ +Y + DSE +F EL + ++ W ALISGYAQ A+Q F+ ++
Sbjct: 650 CVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQ-FYQHMRSD 708
Query: 352 K--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ F SVL A SL++GQ HS I G + D + S+L+DMY K G +
Sbjct: 709 NILPDQAAFASVLRACAGMS--SLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVK 766
Query: 410 ESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S +VF E ++ +W ++I LA++G E + FK+ME + + PD +TFL VL+ C
Sbjct: 767 GSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSAC 826
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G + +GR +FD M+ +Y + P DH CMVD+LGR G L EAEE + ++ +
Sbjct: 827 SHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPML 886
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LLGACR HG+ G+R AD LM+++P S SYVL+S++YAE +W LR+ MK
Sbjct: 887 WSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKL 946
Query: 589 KGVRKEVGFSWADVG 603
KGV+K G+SW + G
Sbjct: 947 KGVKKLPGYSWIEPG 961
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 265/534 (49%), Gaps = 20/534 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+N Y G+ A +F + NP++V+WN ++SG K +++A+SF L + G+
Sbjct: 250 VNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATR 309
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + LS +G +H+ K GLD VYVG+AL+ MY++ ++ A++VF+
Sbjct: 310 SSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNS 369
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ V WNA+L G+ Q+G E + M R G + D +FTS SAC L
Sbjct: 370 LGERNIVLWNAMLGGFAQNG-LAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNF 428
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G Q+H V IK + +++ V N L+ Y+K +A K F M + +SW +I
Sbjct: 429 GGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQ 488
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++A +F+ M +GV P++V+ ++ A + +K G+ H L +K +
Sbjct: 489 EEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCA 548
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
+ LI MY + + + VF + R ++S NALI+GY L A+ F + +
Sbjct: 549 GSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHLE-EAIHLFQEIQMVGL 607
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFE 410
KP TF +L+ A ++L G++ H ++K G L S +V +LL +Y +
Sbjct: 608 KPTEVTFAGLLDGCDGAFMLNL--GRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVD 665
Query: 411 SQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
S+ +F+E Q K WTA+IS A+ +E + ++ M + + PD F SVL C
Sbjct: 666 SETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACA 725
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIP 521
+ G+ + + +H + D +C ++DM + G ++ + ++ ++P
Sbjct: 726 GMSSLQNGQEIHSLI---FHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMP 776
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/533 (26%), Positives = 254/533 (47%), Gaps = 54/533 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI-----GVVF 55
+++Y K G D A F+ L D+ +WN+VLS + D L + + + V
Sbjct: 83 VDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMY--LDHGLFATVVQSFVCMWNHEVRP 140
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T++ LS C + FG Q+H + K G + LI MY++ L +AR VF
Sbjct: 141 NEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVF 200
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D N D+VSW A+++GY +DG + +EA+ M R G D ++ + +A
Sbjct: 201 DGALNLDTVSWTALIAGYVRDG-FPMEAVKVFDRMQRVGHAPDQITLVTVVNA------- 252
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+V++G + DA K+F ++ + NV++W MIS +
Sbjct: 253 -----------------YVALGRL-----------ADARKLFTQIPNPNVVAWNVMISGH 284
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E+A+S F E++ G+ + ++ AI+ +++ G M+H K
Sbjct: 285 AKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNV 344
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + L+ MYA+ M +++VF+ L R I+ WNA++ G+AQNGL+ V FF +K
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLA-QEVMEFFSCMKR 403
Query: 351 --SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+P+ +TF S+ +A + L G + H+ +IK S+ V +AL+DMY K G++
Sbjct: 404 HGPQPDEFTFTSIFSACASLH--YLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGAL 461
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E+++ F + +W AII + + F+ M + GV PD ++ S+++ C
Sbjct: 462 KEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSAC 521
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +G+ +L ++ S S ++DM + G + A ++ +P
Sbjct: 522 ANVQELKRGQQC-HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMP 573
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 208/443 (46%), Gaps = 45/443 (10%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+HS +K G+ + +GN ++ +Y + G + A++ F + KD +WN++LS Y G
Sbjct: 63 IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+ + + + M +R + +F SAC +++ G+Q+H K G+G
Sbjct: 123 FAT-VVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQG 181
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCP 253
L+ Y+KC DA VF + + +SWT +I+ D AV +F M+ G P
Sbjct: 182 GLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAP 241
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+ +T + +++A Y + D+ K+F
Sbjct: 242 DQITLVTVVNA-----------------------------------YVALGRLADARKLF 266
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
++ +++WN +ISG+A+ G + A+ F + K K + GSVL+A+ +
Sbjct: 267 TQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS--M 324
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L +G H+ K GLD + VGSAL++MY K + +++VFN E++ W A++
Sbjct: 325 LNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGG 384
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
A++G + VM F M+ G +PD TF S+ + C ++ G L M+K+
Sbjct: 385 FAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKN-KFAS 443
Query: 493 SPDHYSCMVDMLGRVGRLEEAEE 515
+ + +VDM + G L+EA +
Sbjct: 444 NLFVANALVDMYAKSGALKEARK 466
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 164/373 (43%), Gaps = 47/373 (12%)
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L K IH S+K+G G +GNV++ Y KC A K F R+ ++V +W +++SM
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116
Query: 235 NREDAVSLFKEMRLDGVC-------PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ LF + VC PN+ TF ++ A S V GR +H KT F
Sbjct: 117 YLDHG--LFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
LI MYA+ ++D+ VFD + +SW ALI+GY ++G + AV+ F
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVF--- 231
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ +VG D I +++ Y G
Sbjct: 232 ---------------------------------DRMQRVGHAPDQITLVTVVNAYVALGR 258
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +++++F + + AW +IS A+ G E ++ F E++ G++ + SVL+
Sbjct: 259 LADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSA 318
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
M++ G + K+ ++ + S +V+M + +++ A+++ + G +
Sbjct: 319 IASLSMLNYGSMVHAQATKE-GLDDNVYVGSALVNMYAKCSKMDAAKQVFNSL-GERNIV 376
Query: 528 VLQSLLGACRIHG 540
+ ++LG +G
Sbjct: 377 LWNAMLGGFAQNG 389
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/645 (35%), Positives = 372/645 (57%), Gaps = 15/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y K G D+A IF+ L V+W +++G+ K S+ +L +M V D
Sbjct: 196 IDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDR 255
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS C E G Q+H +++ G D +V V N +I Y + ++ R++F+
Sbjct: 256 YVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNR 315
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +KD VSW +++G Q+ +G +A+ +EM+RKG + D TS ++CG + L+
Sbjct: 316 LVDKDVVSWTTMIAGCMQNSFHG-DAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQK 374
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR 236
G+Q+H +IK+ V N L+ Y+KC+ +A KVF + NV+S+ MI +R
Sbjct: 375 GRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSR 434
Query: 237 ED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+D A+ LF+EMRL P +TF+ L+ S L++ IH L IK +
Sbjct: 435 QDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFA 494
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
+ LI +Y++ + D+ VF+E+ R+I+ WNA+ SGY+Q + +++ + + +
Sbjct: 495 GSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRL 554
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN +TF +V+ A A+ SL+HGQ+ H+ +IK+GLD DP V ++L+DMY K GSI ES
Sbjct: 555 KPNEFTFAAVIAA--ASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEES 612
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ F+ T ++ W ++IS A+HGD + F+ M +GV+P+ +TF+ +L+ C
Sbjct: 613 HKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHA 672
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ G H F+SM K + IEP DHY+CMV +LGR G++ EA+E V ++P P V +S
Sbjct: 673 GLLDLGFHHFESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRS 731
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACR+ G+VE+G A+ + +PA SGSY+L+SN++A KG W V ++R+ M V
Sbjct: 732 LLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRV 791
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
KE G+SW +V + +H F + D H S I + + L ++K
Sbjct: 792 VKEPGWSWIEVN--NEVHRFIARDTAHRDSTLISLVLDNLILQIK 834
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/526 (28%), Positives = 269/526 (51%), Gaps = 16/526 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVFD 56
++ Y K A +F+ + + ++V+W++++S + + + L F M +
Sbjct: 94 LHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPN 153
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ + C LQLH +VK G +VYVG +LI Y++ G + EAR +FD
Sbjct: 154 EYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFD 213
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNL 175
+ K +V+W AI++GY + G E L L MR+G + D +S SAC + L
Sbjct: 214 GLKVKTTVTWTAIIAGYAKLGR--SEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFL 271
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E GKQIHG ++ G+ VSV N ++ Y KC K+F R+ D++V+SWTTMI+
Sbjct: 272 EGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGC 331
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ DA+ LF EM G P+ ++++ +++GR +H IK N ++
Sbjct: 332 MQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDD 391
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
V N LI MYA+ +S+ ++ KVFD ++ ++S+NA+I GY++ + A+ F + +
Sbjct: 392 FVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLS 451
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
S P TF V ++ L+ + H IIK G+ D GSAL+D+Y K +
Sbjct: 452 LSPPTLLTF--VSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVG 509
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++ VF E ++ W A+ S ++ + E + +K+++ ++P+ TF +V+
Sbjct: 510 DARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAAS 569
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+ G+ + ++K ++ P + +VDM + G +EE+ +
Sbjct: 570 NIASLRHGQQFHNQVIK-MGLDDDPFVTNSLVDMYAKCGSIEESHK 614
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 211/393 (53%), Gaps = 11/393 (2%)
Query: 78 QLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
++H+ IV G +V++ N L+ YS+ +A+++FD MP+++ V+W++++S YTQ
Sbjct: 72 KIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQH 131
Query: 137 GDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
G Y VEA+L MR + + S AC NL Q+HG +K G+ V
Sbjct: 132 G-YSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----MNR-EDAVSLFKEMRLDG 250
VG L+ Y+K +A +F + + ++WT +I+ + R E ++ LF +MR
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGD 250
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V P+ ++ A S+ ++ G+ IHG ++ F + SV N +I Y + ++
Sbjct: 251 VYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGR 310
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAE 369
K+F+ L ++++SW +I+G QN A+ F ++++ KP+A+ SVLN+ G+ +
Sbjct: 311 KLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQ 370
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+L+ G++ H++ IKV +D+D V + L+DMY K S+ +++VF+ + ++ A+
Sbjct: 371 --ALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAM 428
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
I +R ++ F+EM P +TF+
Sbjct: 429 IEGYSRQDKLVEALDLFREMRLSLSPPTLLTFV 461
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 4/197 (2%)
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE- 350
+ N L+ Y++ D++K+FD + R +++W++++S Y Q+G S+ A+ F ++
Sbjct: 89 LVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSC 148
Query: 351 -SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KPN Y SV+ A ++S + H ++K G D VG++L+D Y KRG +
Sbjct: 149 SEKPNEYILASVVRACTQLGNLS--QALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVD 206
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E++ +F+ + K+ WTAII+ A+ G E + F +M V PD SVL+ C
Sbjct: 207 EARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACS 266
Query: 470 RNGMIHKGRHLFDSMLK 486
+ G+ + +L+
Sbjct: 267 MLEFLEGGKQIHGYVLR 283
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/649 (34%), Positives = 372/649 (57%), Gaps = 26/649 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MYC+ DKA +F + D+VSWN+++SG+ + ++AL R +GVV D+
Sbjct: 157 IDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDS 216
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ L C G +H LI K G+ +V V N L++MY ++ L++ RR+FD+
Sbjct: 217 YTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDK 276
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D+VSWN ++ GY+Q G Y E+I +EM+ + + D ++ TS ACGH +LE
Sbjct: 277 MVLRDAVSWNTMICGYSQVGLYE-ESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEF 334
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK +H I GY + N+L++ Y+KC + +VF M ++ +SW +MI++
Sbjct: 335 GKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQ 394
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIH-AISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ ++A+ LFK M+ D V P+ VT++ L+ + +G+L G+ +H K F S
Sbjct: 395 NGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDL-HLGKELHCDLAKMGFNSNIV 452
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN-----GLSLAAVQAFFG 346
V N L+ MYA+ M DS KVF+ + R+II+WN +I+ + GL + + G
Sbjct: 453 VSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEG 512
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
V P+ T S+L + + G+ H I K+GL+SD VG+ L++MY K G
Sbjct: 513 V----TPDMATMLSILPVCSLLA--AKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCG 566
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
S+ S +VF + K WTA+ISA +G+ + + F EME G+ PD + F++++
Sbjct: 567 SLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIF 626
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G++ +G + F M KDY IEP +HY+C+VD+L R L++AE+ + +P P
Sbjct: 627 ACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDS 686
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
S+ +LL ACR+ G+ E+ ER+++ ++++ P +G YVL+SN+YA G W+ V +RK +
Sbjct: 687 SIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSI 746
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
K++G++K+ G SW ++ + ++ F +G + EE+ ++ L M
Sbjct: 747 KARGLKKDPGCSWMEIQ--NKVYVFGTGTKFFEQFEEVNKLLGMLAGLM 793
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 275/544 (50%), Gaps = 17/544 (3%)
Query: 24 DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
++ WN+++ + +ALS I + D T+ + ++ C F +H
Sbjct: 79 NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 138
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
++ G S++Y+GNALI MY R+ L +AR+VF+EMP +D VSWN+++SGY +G Y
Sbjct: 139 DRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG-YW 197
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EA+ G+ D + +S ACG ++E G IHG+ K+G V V N L
Sbjct: 198 NEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGL 257
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPND 255
+S Y K D ++F +M R+ +SW TMI E+++ LF EM ++ P+
Sbjct: 258 LSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDL 316
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
+T ++ A ++ G+ +H I + + + + N LI MYA+ ++ S++VF
Sbjct: 317 LTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSG 376
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKH 375
+ C++ +SWN++I+ Y QNG A++ F + + KP++ T+ +L+ D+ L
Sbjct: 377 MKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHL-- 434
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G+ H + K+G +S+ +V + L+DMY K G + +S +VF + + W II++
Sbjct: 435 GKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVH 494
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
D + M +GV PD T LS+L VC +G+ + + K +E
Sbjct: 495 SEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK-LGLESDVP 553
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM 555
+ +++M + G L + + V ++ + +L+ AC ++G G++ A +M
Sbjct: 554 VGNVLIEMYSKCGSLRNSFQ-VFKLMKTKDVVTWTALISACGMYGE---GKKAVRAFGEM 609
Query: 556 EPAG 559
E AG
Sbjct: 610 EAAG 613
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 216/409 (52%), Gaps = 10/409 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD-EMPNKDSVSWNAILSGYTQD 136
+LHSLI+ GL V LI Y+ + + VF P+ + WN+I+ T +
Sbjct: 34 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G + EA+ E R L+ D +F S +AC + E+ K IH + MG+G+ + +
Sbjct: 94 GLFS-EALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYI 152
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGV 251
GN L+ Y + A KVF M R+V+SW ++IS +A+ ++ R GV
Sbjct: 153 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGV 212
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ T ++ A V+EG +IHGL K + V N L++MY +F + D +
Sbjct: 213 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRR 272
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDI 371
+FD++ R+ +SWN +I GY+Q GL +++ F ++ + KP+ T S+L A G D
Sbjct: 273 IFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGD- 331
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
L+ G+ H ++I G + D + L++MY K G++ SQ VF+ + K +W ++I+
Sbjct: 332 -LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMIN 390
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
++G ++ M FK M+ V+PDS+T++ +L++ + G +H G+ L
Sbjct: 391 VYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHLGKEL 438
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/645 (34%), Positives = 372/645 (57%), Gaps = 15/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y K+G + A +F+ L V+W T+++G+ K S +L +M VV D
Sbjct: 79 IDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDR 138
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS C E G Q+H+ +++ G + +V V N LI Y++ R+ R++FD+
Sbjct: 139 YVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQ 198
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ +SW ++SGY Q+ + EA+ EM R G + D + TS ++CG + LE
Sbjct: 199 MVVKNIISWTTMISGYMQNS-FDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQ 257
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+Q+H +IK ++ V N L+ Y+K + DA KVF M ++NVIS+ MI
Sbjct: 258 GRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSS 317
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF EMR+ P+ +TF+ L+ + ++ + IHGL IK +
Sbjct: 318 QEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFA 377
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
+ LI +Y++ ++D+ VF+E++ ++I+ WNA+ GY Q+ + A++ + +
Sbjct: 378 GSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQ 437
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN +TF +++ A A+ SL+HGQ+ H+ ++K+GLD P V +AL+DMY K GSI E+
Sbjct: 438 KPNEFTFAALITA--ASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEA 495
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+++FN + + W ++IS A+HG+ E + F+EM +G++P+ +TF++VL+ C
Sbjct: 496 RKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHA 555
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + G + F+SM + I+P +HY+C+V +LGR G+L EA+E + ++P P V +S
Sbjct: 556 GXVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRS 614
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACRI GNVE+G+ A+ + +P SGSY+L+SN++A KG W V +R M S V
Sbjct: 615 LLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEV 674
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
KE G SW +V + ++ F + TH ++ I + + L +K
Sbjct: 675 VKEPGRSWIEVN--NKVNVFIARXTTHREADMIGSVLDILIQHIK 717
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 237/448 (52%), Gaps = 12/448 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G QLH +V+ G D +VYVG +LI YS+ G + AR VFD++ K +V+W I++GYT+
Sbjct: 56 GAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTK 115
Query: 136 DGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
G V L L MR+ + D +S SAC + LE GKQIH ++ G V
Sbjct: 116 CGRSXVS--LELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDV 173
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLD 249
SV NVL+ Y+KC K+F +M +N+ISWTTMIS + +A+ LF EM
Sbjct: 174 SVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRL 233
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
G P+ ++ + +++GR +H IK N S V N LI MYA+ + D+
Sbjct: 234 GWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDA 293
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAA 368
+KVFD ++ + +IS+NA+I GY+ A++ F + ++ P+ TF S+L +A
Sbjct: 294 KKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGV--SA 351
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+L+ ++ H IIK G+ D GSAL+D+Y K + +++ VF E EK W A
Sbjct: 352 SLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNA 411
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+ +H + E + + ++ +P+ TF +++T + G+ + ++K
Sbjct: 412 MFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVK-M 470
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
++ P + +VDM + G +EEA ++
Sbjct: 471 GLDFCPFVTNALVDMYAKCGSIEEARKM 498
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 174/341 (51%), Gaps = 11/341 (3%)
Query: 135 QDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
+D Y EA++ +++ RK G + S AC +E G Q+HG ++ G+
Sbjct: 12 EDEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQD 71
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRL 248
V VG L+ YSK A VF ++ ++ ++WTT+I+ + ++ LF +MR
Sbjct: 72 VYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRE 131
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
V P+ ++ A S+ ++ G+ IH ++ + SV N LI Y + ++
Sbjct: 132 TNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKA 191
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVG 366
K+FD++ + IISW +ISGY QN A++ FG + KP+ + SVL + G
Sbjct: 192 GRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMK-LFGEMNRLGWKPDGFACTSVLTSCG 250
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
+ E +L+ G++ H++ IK L+S+ V + L+DMY K + ++++VF+ E++ ++
Sbjct: 251 SLE--ALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISY 308
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
A+I + + F EM + P +TF+S+L V
Sbjct: 309 NAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGV 349
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 152/284 (53%), Gaps = 9/284 (3%)
Query: 237 EDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
E+A+ +F ++ R G PN+ +I A + +V++G +HG +++ F + V
Sbjct: 18 EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 77
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--P 353
LI Y++ ++ + VFD+L + ++W +I+GY + G S +++ F ++E+ P
Sbjct: 78 LIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLE-LFAQMRETNVVP 136
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ Y SVL+A E L+ G++ H+++++ G + D V + L+D Y K + ++
Sbjct: 137 DRYVVSSVLSACSMLE--FLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRK 194
Query: 414 VFNETQEKSEFAWTAIISALARHG-DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F++ K+ +WT +IS ++ D+E+ M F EM G +PD SVLT CG
Sbjct: 195 LFDQMVVKNIISWTTMISGYMQNSFDWEA-MKLFGEMNRLGWKPDGFACTSVLTSCGSLE 253
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ +GR + +K ++E + + ++DM + L +A+++
Sbjct: 254 ALEQGRQVHAYTIKA-NLESNEFVKNGLIDMYAKSNLLXDAKKV 296
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 335 GLSLAAVQAFFGVIKES--KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLD 389
G S A+ F + ++S PN + SV+ A +G E G + H +++ G D
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEK-----GAQLHGFVVRSGFD 69
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
D VG++L+D Y K G I ++ VF++ EK+ WT II+ + G + F +M
Sbjct: 70 QDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQM 129
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
V PD SVL+ C + G+ + +L+ E + ++D + R
Sbjct: 130 RETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR-GTEMDVSVVNVLIDFYTKCNR 188
Query: 510 LEEAEELVGQI 520
++ +L Q+
Sbjct: 189 VKAGRKLFDQM 199
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/636 (33%), Positives = 365/636 (57%), Gaps = 16/636 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K A +F+ + ++VSW +V++G+ ++ +AL F +M GV+ D
Sbjct: 105 LNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQ 164
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + + C G QLH+ ++K + + NALI+MY++ +++A VF
Sbjct: 165 FTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSR 224
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL-DHVSFTSAASACGHEKNLE 176
M +D +SW ++++G++Q G Y +EA+ EM+ +G+ L + F S SAC E
Sbjct: 225 MATRDLISWGSMIAGFSQLG-YELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPE 283
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+Q+HG+SIK G G V G L Y+KC + A VF ++ ++++W +I+
Sbjct: 284 YGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFA 343
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ ++A++ F +MR G+ P+++T L+ A + + + +G +HG K +
Sbjct: 344 YGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVP 403
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAF-FGVIK 349
VCN L+TMYA+ ++D+ F+E+ C +++SWNA+++ ++ + + I
Sbjct: 404 VCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCIS 463
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ +P+ T +VL A +AE +S++ G + H + +K GL+ D V + L+D+Y K GS+
Sbjct: 464 QHRPDYITLTNVLGA--SAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLK 521
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ ++F+ +W+++I A+ G E + FK M V+P+ +TF+ VLT C
Sbjct: 522 TAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACS 581
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G L+ +M K++ I P+ +H SCMVD+L R G L EAE + Q+ P + V
Sbjct: 582 HVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVW 641
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LL AC+ HGNV++G+R A+ ++K++P+ S ++VL+ N+YA KG+WE VA LR MK +
Sbjct: 642 KTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQR 701
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
GVRK G SW +V D +H F D+ HP +IY
Sbjct: 702 GVRKVPGQSWIEVK--DRIHVFFVEDSLHPERNKIY 735
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 144/498 (28%), Positives = 246/498 (49%), Gaps = 23/498 (4%)
Query: 28 WNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG 87
+N + FE F L ++ + A +Y +L +H G ++H ++K
Sbjct: 43 FNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSL----EH-----GKKIHDHMLKSK 93
Query: 88 LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
++ + N ++ MY + L +A++VFD MP ++ VSW ++++GY+Q+G G A+
Sbjct: 94 SHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQ-GGNALEFY 152
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
+M++ G+ D +F S AC ++ LG+Q+H +K +G H+ N L+S Y+K
Sbjct: 153 FQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKS 212
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGV-CPNDVTFIGL 261
+ DA VF RM R++ISW +MI+ + +A+ FKEM GV PN+ F +
Sbjct: 213 NLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSV 272
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
A S + GR +HG+ IK + L MYA+ + + VF ++ ++
Sbjct: 273 FSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDL 332
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRC 379
++WNA+I+G+A G + A+ AFF ++ P+ T S+L A + + L G +
Sbjct: 333 VAWNAIIAGFAYGGDAKEAI-AFFSQMRHQGLIPDEITVRSLLCACTSPSE--LYQGMQV 389
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF-AWTAIISALARHGD 438
H +I K+GLD D V + LL MY K + ++ F E + ++ +W AI++A RH
Sbjct: 390 HGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQ 449
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS 498
E V K M RPD IT +VL I G + LK + +
Sbjct: 450 AEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKT-GLNCDTSVTN 508
Query: 499 CMVDMLGRVGRLEEAEEL 516
++D+ + G L+ A ++
Sbjct: 509 GLIDLYAKCGSLKTAHKI 526
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 208/413 (50%), Gaps = 17/413 (4%)
Query: 142 EAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EAI A + +K G L ++ SAC + ++LE GK+IH +K +++ N +
Sbjct: 45 EAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHI 104
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMNRE--DAVSLFKEMRLDGVCPND 255
++ Y KC+ DA KVF M +RNV+SWT++I S N + +A+ + +M GV P+
Sbjct: 105 LNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQ 164
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
TF +I A S + GR +H +K+ F + N LI+MY + + D+ VF
Sbjct: 165 FTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSR 224
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISL 373
++ R++ISW ++I+G++Q G L A+ F ++ + PN + FGSV +A + +
Sbjct: 225 MATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSL--LQP 282
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
++G++ H IK GL D G +L DMY K G + ++ VF + AW AII+
Sbjct: 283 EYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGF 342
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL---FDSMLKDYHI 490
A GD + + F +M ++G+ PD IT S+L C +++G + + M D +
Sbjct: 343 AYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDV 402
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
+ ++ M + L +A ++ L ++L AC H E
Sbjct: 403 PVC----NTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAE 451
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVL 362
F + E V +L + S N I+ + L A++AF +++ T +
Sbjct: 11 FATNNVKETVLSKLRAEQ--SSNEYITSLCKQKLFNEAIKAF-EFLQKKTGFCLTLSTYA 67
Query: 363 NAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
+ A + SL+HG++ H H++K D + + +L+MYGK S+ ++Q+VF+ E+
Sbjct: 68 YLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPER 127
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+ +WT++I+ +++G + + + +M GV PD TF S++ C G I GR L
Sbjct: 128 NVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLH 187
Query: 482 DSMLK 486
+LK
Sbjct: 188 AHVLK 192
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/649 (34%), Positives = 372/649 (57%), Gaps = 26/649 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MYC+ DKA +F + D+VSWN+++SG+ + ++AL R +GVV D+
Sbjct: 216 IDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDS 275
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ L C G +H LI K G+ +V V N L++MY ++ L++ RR+FD+
Sbjct: 276 YTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDK 335
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D+VSWN ++ GY+Q G Y E+I +EM+ + + D ++ TS ACGH +LE
Sbjct: 336 MVLRDAVSWNTMICGYSQVGLYE-ESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEF 393
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK +H I GY + N+L++ Y+KC + +VF M ++ +SW +MI++
Sbjct: 394 GKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQ 453
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIH-AISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ ++A+ LFK M+ D V P+ VT++ L+ + +G+L G+ +H K F S
Sbjct: 454 NGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXL-GKELHCDLAKMGFNSNIV 511
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN-----GLSLAAVQAFFG 346
V N L+ MYA+ M DS KVF+ + R+II+WN +I+ + GL + + G
Sbjct: 512 VSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEG 571
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
V P+ T S+L + + G+ H I K+GL+SD VG+ L++MY K G
Sbjct: 572 V----TPDMATMLSILPVCSLLA--AKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCG 625
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
S+ S +VF + K WTA+ISA +G+ + + F EME G+ PD + F++++
Sbjct: 626 SLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIF 685
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G++ +G + F M KDY IEP +HY+C+VD+L R L++AE+ + +P P
Sbjct: 686 ACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDS 745
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
S+ +LL ACR+ G+ E+ +R+++ ++++ P +G YVL+SN+YA G W+ V +RK +
Sbjct: 746 SIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSI 805
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
K++G++K+ G SW ++ + ++ F +G + EE+ ++ L M
Sbjct: 806 KARGLKKDPGCSWMEIQ--NKVYVFGTGTKFSEQFEEVNKLLGMLAGLM 852
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 275/544 (50%), Gaps = 17/544 (3%)
Query: 24 DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
++ WN+++ + +ALS I + D T+ + ++ C F +H
Sbjct: 138 NVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 197
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
++ G S++Y+GNALI MY R+ L +AR+VF+EMP +D VSWN+++SGY +G Y
Sbjct: 198 DRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG-YW 256
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EA+ G+ D + +S ACG ++E G IHG+ K+G V V N L
Sbjct: 257 NEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGL 316
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPND 255
+S Y K D ++F +M R+ +SW TMI E+++ LF EM ++ P+
Sbjct: 317 LSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDL 375
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
+T ++ A ++ G+ +H I + + + + N LI MYA+ ++ S++VF
Sbjct: 376 LTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSG 435
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKH 375
+ C++ +SWN++I+ Y QNG A++ F + + KP++ T+ +L+ D+ L
Sbjct: 436 MKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXL-- 493
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G+ H + K+G +S+ +V + L+DMY K G + +S +VF + + W II++
Sbjct: 494 GKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVH 553
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
D + M +GV PD T LS+L VC +G+ + + K +E
Sbjct: 554 SEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFK-LGLESDVP 612
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM 555
+ +++M + G L + + V ++ + +L+ AC ++G G++ A +M
Sbjct: 613 VGNVLIEMYSKCGSLRNSFQ-VFKLMKTKDVVTWTALISACGMYGE---GKKAVRAFGEM 668
Query: 556 EPAG 559
E AG
Sbjct: 669 EAAG 672
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 215/409 (52%), Gaps = 10/409 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD-EMPNKDSVSWNAILSGYTQD 136
+LHSLI+ GL V LI Y+ + + VF P+ + WN+I+ T +
Sbjct: 93 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHN 152
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G + EA+ E R L+ D +F S +AC + E+ K IH + MG+G+ + +
Sbjct: 153 GLFS-EALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYI 211
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGV 251
GN L+ Y + A KVF M R+V+SW ++IS +A+ ++ R GV
Sbjct: 212 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGV 271
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ T ++ A V+EG +IHGL K + V N L++MY +F + D +
Sbjct: 272 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRR 331
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDI 371
+FD++ R+ +SWN +I GY+Q GL +++ F ++ + KP+ T S+L A G D
Sbjct: 332 IFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGD- 390
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
L+ G+ H ++I G + D + L++MY K G++ SQ VF+ + K +W ++I+
Sbjct: 391 -LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMIN 449
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
++G ++ M FK M+ V+PDS+T++ +L++ + G + G+ L
Sbjct: 450 VYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXLGKEL 497
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/654 (34%), Positives = 364/654 (55%), Gaps = 28/654 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVFD 56
+ +Y G + F ++ +I SWN+++S + + D ++L GV D
Sbjct: 90 VTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPD 149
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ L CL G ++H ++K G + +VYV +LI +YSR+G + A +VF
Sbjct: 150 FYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFV 206
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+MP +D SWNA++SG+ Q+G+ EA+ L M + +++D V+ +S C ++
Sbjct: 207 DMPVRDVGSWNAMISGFCQNGNVA-EALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVV 265
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G +H IK G + V V N L++ YSK DA +VF M R+++SW ++I+
Sbjct: 266 GGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYE 325
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS-EP 290
++ A+ FKEM G+ P+ +T + L + + GR +HG ++ +L +
Sbjct: 326 QNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDI 385
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ N L+ MYA+ S+ + VF++L R++ISWN LI+GYAQNGL+ A+ A+ +++E
Sbjct: 386 VIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAY-NMMEE 444
Query: 351 SK---PNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ PN T+ S+L A VGA L+ G + H +IK L D V + L+DMYGK
Sbjct: 445 GRTIVPNQGTWVSILPAYSHVGA-----LQQGMKIHGRLIKNCLFLDVFVATCLIDMYGK 499
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + ++ +F E +++ W AIIS+L HG E + FK+M GV+ D ITF+S+
Sbjct: 500 CGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSL 559
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L+ C +G++ + + FD+M K+Y I+P+ HY CMVD+ GR G LE+A LV +P
Sbjct: 560 LSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQA 619
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
S+ +LL ACRIHGN E+G +D L++++ G YVL+SN+YA G WE +R
Sbjct: 620 DASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRS 679
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+ +G+RK G W+ V + F +G+ +HP+ EIY L ++MK L
Sbjct: 680 LARDRGLRKTPG--WSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSL 731
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 251/501 (50%), Gaps = 40/501 (7%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLH+L++ G +V + L+T+Y+ G L + F + K+ SWN+++S Y + G
Sbjct: 69 QLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRG 128
Query: 138 DY--GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
Y ++ + L+ + G+R D +F AC +L G+++H +KMG+ V
Sbjct: 129 RYRDSMDCVTELLSL--SGVRPDFYTFPPVLKAC---LSLADGEKMHCWVLKMGFEHDVY 183
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDG 250
V L+ YS+ A+KVF M R+V SW MIS N +A+ + M+ +
Sbjct: 184 VAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEE 243
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V + VT ++ + N V G ++H IK S+ V N LI MY++F +QD++
Sbjct: 244 VKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQ 303
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-----SKPNAYTFGSVLNAV 365
+VFD + R+++SWN++I+ Y QN + A+ G KE +P+ T S+ +
Sbjct: 304 RVFDGMEVRDLVSWNSIIAAYEQNDDPVTAL----GFFKEMLFVGMRPDLLTVVSLASIF 359
Query: 366 GAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
G D + G+ H +++ L+ D ++G+AL++MY K GSI ++ VF + +
Sbjct: 360 GQLSDRRI--GRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVI 417
Query: 425 AWTAIISALARHGDYESVMNQFKEMEN-KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
+W +I+ A++G ++ + ME + + P+ T++S+L G + +G +
Sbjct: 418 SWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGR 477
Query: 484 MLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRI 538
++K D + +C++DM G+ GRLE+A L +IP + +++ + I
Sbjct: 478 LIKNCLFLDVFVA------TCLIDMYGKCGRLEDAMSLFYEIPQETSVP-WNAIISSLGI 530
Query: 539 HGNVEMGERIADALMKMEPAG 559
HG+ GE+ M G
Sbjct: 531 HGH---GEKALQLFKDMRADG 548
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 214/430 (49%), Gaps = 29/430 (6%)
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
N+ + KQ+H + + +G V + L++ Y+ ++ F+ + +N+ SW +M+S
Sbjct: 63 NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVS 122
Query: 234 M-----NREDAVSLFKE-MRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNF 286
D++ E + L GV P+ TF ++ A +S+ +G +H +K F
Sbjct: 123 AYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLA----DGEKMHCWVLKMGF 178
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ V LI +Y+RF +++ + KVF ++ R++ SWNA+ISG+ QNG A++
Sbjct: 179 EHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDR 238
Query: 347 V-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ +E K + T S+L + D+ G H ++IK GL+SD V +AL++MY K
Sbjct: 239 MKTEEVKMDTVTVSSMLPICAQSNDVV--GGVLVHLYVIKHGLESDVFVSNALINMYSKF 296
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++QRVF+ + + +W +II+A ++ D + + FKEM G+RPD +T +S+
Sbjct: 297 GRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLA 356
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
++ G+ GR + +++ +E + +V+M ++G ++ A + Q+P
Sbjct: 357 SIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDV 416
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEP-----AGSGSYVLMSNLYAEKGDWEMVA 580
+S + G + + DA ME G++V + Y+ G
Sbjct: 417 ISWNTLITG----YAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVG------ 466
Query: 581 ILRKGMKSKG 590
L++GMK G
Sbjct: 467 ALQQGMKIHG 476
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/645 (32%), Positives = 367/645 (56%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++++ K G ++A +F +++ ++T+L G+ K+ + AL+F RM V
Sbjct: 88 VSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVV 147
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ L C D+ G ++H ++ + V+ ++ MY++ ++ +A ++FD
Sbjct: 148 YNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDR 207
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D VSWN I++G++Q+G + +A+ ++ M +G R D ++ + A L +
Sbjct: 208 MPERDLVSWNTIIAGFSQNG-FAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GK IHG +I+ G+ V++ L YSKC A +F M + V+SW +M+
Sbjct: 267 GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E A+++F++M +G+ P VT + +HA + ++ G+ +H + N S+ SV
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI+MY++ + + + +F+ L+ R +SWNA+I GYAQNG A+ F +
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 446
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+++T SV+ A+ AE +H + H II+ LD + V +AL+DMY K G+I +
Sbjct: 447 KPDSFTMVSVIPAL--AELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+++F+ ++ W A+I HG + ++ F +M+ V P+ IT+LSV++ C +
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS 564
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G F SM +DY +EPS DHY MVD+LGR GR++EA + + +P PG++V +
Sbjct: 565 GLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGA 624
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
+LGAC+IH N+E+GE+ A L ++ P G +VL++N+YA W VA +RK M+ KG+
Sbjct: 625 MLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGL 684
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K G S ++ + +H F SG THP+S+ IY E L E+K
Sbjct: 685 KKTPGCSVVELR--NEVHSFYSGSTTHPQSKRIYAFLEELVYEIK 727
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 249/515 (48%), Gaps = 54/515 (10%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+ L++K GL +E L++++S++G + EA RVF+ + +K ++ +L GY ++
Sbjct: 67 QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS 126
Query: 138 DYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
+E LA + MR ++ +FT CG +L+ GK+IHG I + +V
Sbjct: 127 --SLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFA 184
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMRLDGV 251
+++ Y+KC DA K+F RM +R+++SW T+I S N + A+ L M+ +G
Sbjct: 185 MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQ 244
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ +T + ++ A + L+ G+ IHG I+ F ++ L MY++ S++ +
Sbjct: 245 RPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARL 304
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAED 370
+FD + + ++SWN+++ GY QNG A+ F +++E P T L+A D
Sbjct: 305 IFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGD 364
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
L+ G+ H + ++ L SD V ++L+ MY K + + +FN ++ +W A+I
Sbjct: 365 --LERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMI 422
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG--------------------- 469
A++G +N F EM++ G++PDS T +SV+
Sbjct: 423 LGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLD 482
Query: 470 --------------RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+ G IH R LFD M+ D H+ ++ M+D G G A +
Sbjct: 483 KNIFVTTALVDMYSKCGAIHMARKLFD-MISDRHVIT----WNAMIDGYGTHGLGRAALD 537
Query: 516 LVGQIPGG---PGLSVLQSLLGACRIHGNVEMGER 547
L ++ G P S++ AC G V+ G R
Sbjct: 538 LFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR 572
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 108/212 (50%), Gaps = 5/212 (2%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+KE I L IK +E L+++++++ S+ ++ +VF+ + + ++ ++ G
Sbjct: 62 MKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKG 121
Query: 331 YAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
YA+N SL AF ++ + KP Y F +L G D LK G+ H +I
Sbjct: 122 YAKNS-SLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNAD--LKRGKEIHGQLITNSF 178
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
++ + +++MY K I ++ ++F+ E+ +W II+ +++G + +
Sbjct: 179 AANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLR 238
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
M+++G RPDSIT ++VL G++ G+ +
Sbjct: 239 MQDEGQRPDSITLVTVLPAAADVGLLMVGKSI 270
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/645 (34%), Positives = 363/645 (56%), Gaps = 27/645 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M G D A IF+ ++ D +SWN++ + + ++ +++ M ++
Sbjct: 292 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 351
Query: 58 VTYSTALSFC--LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T ST LS +DH+ + G +H L+VK G DS V V N L+ MY+ GR VEA VF
Sbjct: 352 TTVSTLLSVLGHVDHQKW--GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 409
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+MP KD +SWN++++ + DG ++A+ L M+ G +++V+FTSA +AC
Sbjct: 410 KQMPTKDLISWNSLMASFVNDGR-SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 468
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E G+ +HG+ + G + +GN L+S Y K ++ +V +M R+V++W +I
Sbjct: 469 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 528
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISI-GNLVKEGRMIHGLCIKTNFLSE 289
ED A++ F+ MR++GV N +T + ++ A + G+L++ G+ +H + F S+
Sbjct: 529 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 588
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG-----LSLAAVQAF 344
V N LITMYA+ + S+ +F+ L R II+WNA+++ A +G L L +
Sbjct: 589 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 648
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
FGV + ++F L+A AA+ L+ GQ+ H +K+G + D + +A DMY K
Sbjct: 649 FGV----SLDQFSFSEGLSA--AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 702
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G I E ++ + +S +W +ISAL RHG +E V F EM G++P +TF+S+
Sbjct: 703 CGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 762
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
LT C G++ KG +D + +D+ +EP+ +H C++D+LGR GRL EAE + ++P P
Sbjct: 763 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 822
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
V +SLL +C+IHGN++ G + A+ L K+EP YVL SN++A G WE V +RK
Sbjct: 823 NDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 882
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
M K ++K+ SW + D + F GD THP++ EIY E
Sbjct: 883 QMGFKNIKKKQACSWVKLK--DKVSSFGIGDRTHPQTMEIYAKLE 925
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 169/616 (27%), Positives = 299/616 (48%), Gaps = 62/616 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K G+ A +F+ + + VSWNT++SG + + + F +M +G+ +
Sbjct: 114 INMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSS 173
Query: 58 VTYSTALSFCLDHEGFLF--GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ ++ C G +F G+Q+H + K GL S+VYV A++ +Y +G + +R+VF
Sbjct: 174 FVIASLVTAC-GRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 232
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+EMP+++ VSW +++ GY+ G+ E ++ + K+
Sbjct: 233 EEMPDRNVVSWTSLMVGYSDKGE--PEEVIDIY------------------------KDE 266
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
LG+QI G +K G + ++V N L+S AN +F +M +R+ ISW ++ +
Sbjct: 267 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 326
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ E++ +F MR N T L+ + + K GR IHGL +K F S
Sbjct: 327 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 386
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
VCN L+ MYA ++ VF ++ +++ISWN+L++ + +G SL A+ +I
Sbjct: 387 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 446
Query: 351 SKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
K N TF S L A + + G+ H ++ GL + I+G+AL+ MYGK G +
Sbjct: 447 GKSVNYVTFTSALAACFTPD--FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 504
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
ES+RV + + AW A+I A D + + F+ M +GV + IT +SVL+ C
Sbjct: 505 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 564
Query: 470 RNG-MIHKGRHLFDSML-----KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
G ++ +G+ L ++ D H++ S ++ M + G L +++L +
Sbjct: 565 LPGDLLERGKPLHAYIVSAGFESDEHVKNS------LITMYAKCGDLSSSQDLFNGLD-N 617
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG--SYVLMSNLYAEKGDWEMVAI 581
+ ++L A HG+ GE + + KM G + L A +A+
Sbjct: 618 RNIITWNAMLAANAHHGH---GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAK----LAV 670
Query: 582 LRKGMKSKGVRKEVGF 597
L +G + G+ ++GF
Sbjct: 671 LEEGQQLHGLAVKLGF 686
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/468 (26%), Positives = 219/468 (46%), Gaps = 42/468 (8%)
Query: 67 CLDHEGF------LFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
C D GF G +H+L VK + V N LI MY+++GR+ AR +FD MP
Sbjct: 76 CFDQIGFSQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPV 135
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL-ELGK 179
++ VSWN ++SG + G Y +E + +M G++ S +ACG ++ G
Sbjct: 136 RNEVSWNTMMSGIVRVGLY-LEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGV 194
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SM 234
Q+HG K G + V V ++ Y + + KVF M DRNV+SWT+++
Sbjct: 195 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 254
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
E+ + ++K+ L GR I G +K+ S+ +V N
Sbjct: 255 EPEEVIDIYKDESL-------------------------GRQIIGQVVKSGLESKLAVEN 289
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKP 353
LI+M ++ + +FD++S R+ ISWN++ + YAQNG + + F + + +
Sbjct: 290 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 349
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N+ T ++L+ +G + K G+ H ++K+G DS V + LL MY G E+
Sbjct: 350 NSTTVSTLLSVLGHVDH--QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 407
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF + K +W +++++ G + M + G + +TF S L C
Sbjct: 408 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 467
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
KGR + ++ + + + +V M G++G + E+ ++ Q+P
Sbjct: 468 FEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 514
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 62/117 (52%)
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
S + +G ++ G+ H+ +K + + + L++MY K G + ++ +F+
Sbjct: 75 SCFDQIGFSQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMP 134
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
++E +W ++S + R G Y M F++M + G++P S S++T CGR+G + +
Sbjct: 135 VRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFR 191
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/655 (32%), Positives = 354/655 (54%), Gaps = 14/655 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
MY K G A +F+ +++ ++ WN ++ G+ K +++LS ++M+ +G+ D
Sbjct: 359 MYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEH 418
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
S L GL H IVK G ++ V NALI+ Y++ + +A VF+ M
Sbjct: 419 AISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRM 478
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P +D++SWN+++SG + +G EAI I M +G LD V+ S AC + G
Sbjct: 479 PRQDTISWNSVISGCSSNG-LNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAG 537
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-- 236
+ +HG S+K G S+ N L+ YS C N++FR M +NV+SWT MI+
Sbjct: 538 RVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRA 597
Query: 237 ---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ L +EM LDG+ P+ +HA + +K+G+ +HG I+ V
Sbjct: 598 GLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVA 657
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N L+ MY + +++++ +FD ++ +++ISWN LI GY++N + F ++ + +P
Sbjct: 658 NALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQFRP 717
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
NA T +L A AA SL+ G+ H++ ++ G D +AL+DMY K G++ ++
Sbjct: 718 NAVTMTCILPA--AASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARV 775
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F+ +K+ +WT +I+ HG + + F++M G+ PD+ +F ++L C +G+
Sbjct: 776 LFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGL 835
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+GR F +M K+Y IEP HY+C+VD+L R G L+EA E + +P P S+ SLL
Sbjct: 836 AAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLL 895
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
CRIH NV++ E++AD + K+EP +G YVL++N+YAE WE V L+ + +G+R+
Sbjct: 896 HGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRE 955
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
G+SW +V +H F + + HP I + + M+ ++ AL
Sbjct: 956 NTGYSWIEVR--SKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYAL 1008
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 161/577 (27%), Positives = 284/577 (49%), Gaps = 28/577 (4%)
Query: 4 YCKSGQFDKALCIFNNL--NNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAV 58
Y K G +A +F+ + D+ W +++S + K+ D A+S +M GV DA
Sbjct: 146 YLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAH 205
Query: 59 TYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S L C+ G L G +H L+ K GL V NALI +YSR GR+ +A RVFD
Sbjct: 206 AVSCVLK-CVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDS 264
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D++SWN+++ G +G +G A+ +M +G + V+ S AC +
Sbjct: 265 MHPRDAISWNSMIGGCFSNGWHGT-AVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLI 323
Query: 178 GKQIHGVSIKMG--YGT--------HVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVI 226
GK +HG S+K G +G ++G+ L+ Y KC A +VF M + NV
Sbjct: 324 GKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVH 383
Query: 227 SWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
W ++ E+++SLF +M G+ P++ L+ I+ + ++G + HG
Sbjct: 384 VWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYI 443
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
+K F ++ +VCN LI+ YA+ + D+ VF+ + ++ ISWN++ISG + NGL+ A+
Sbjct: 444 VKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAI 503
Query: 342 QAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
+ F + + + ++ T SVL A A+ G+ H + +K GL + + +ALLD
Sbjct: 504 ELFIRMWTQGQELDSVTLLSVLPA--CAQSRYWFAGRVVHGYSVKTGLIGETSLANALLD 561
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY + ++F +K+ +WTA+I++ R G ++ V +EM G+RPD
Sbjct: 562 MYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFA 621
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
S L + + +G+ + +++ +E + +++M + +EEA + ++
Sbjct: 622 VTSALHAFAGDESLKQGKSVHGYTIRN-GMEKLLPVANALMEMYVKCRNVEEARLIFDRV 680
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
+S + G R + E +D L++ P
Sbjct: 681 TNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQFRP 717
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 157/543 (28%), Positives = 259/543 (47%), Gaps = 65/543 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y KS A+ +FN + D +SWN+V+SG + +A+ +RM G D+
Sbjct: 459 ISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDS 518
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT + L C + G +H VK GL E + NAL+ MYS ++F
Sbjct: 519 VTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRS 578
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ VSW A+++ Y + G + A L L EM+ G+R D + TSA A +++L+
Sbjct: 579 MGQKNVVSWTAMITSYMRAGLFDKVAGL-LQEMVLDGIRPDVFAVTSALHAFAGDESLKQ 637
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
GK +HG +I+ G + V N LM Y KC +A +F R+ +++VISW T+I S
Sbjct: 638 GKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSR 697
Query: 235 NR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++ SLF +M L PN VT ++ A + + ++ GR IH ++ FL +
Sbjct: 698 NNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYA 756
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ MY + ++ + +FD L+ + +ISW +I+GY +G A+ A F ++ S
Sbjct: 757 SNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAI-ALFEQMRGSG 815
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+A +F ++L A CHS G E
Sbjct: 816 IEPDAASFSAILYAC-------------CHS------------------------GLAAE 838
Query: 411 SQRVFNETQEKSEFA-----WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
+R F Q++ + +T I+ L+R GD + + + M + PDS ++S+L
Sbjct: 839 GRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMP---IEPDSSIWVSLL 895
Query: 466 TVCGRNGMIHKGRHLFDSML-KDYHIEP-SPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
C IHK L + + K + +EP + +Y + ++ R E ++L +I GG
Sbjct: 896 HGC----RIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKI-GG 950
Query: 524 PGL 526
GL
Sbjct: 951 RGL 953
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 203/451 (45%), Gaps = 36/451 (7%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLI-----VKFGLDSEVYVGNALITMYSRWGRLVE 110
D +Y + C + + H+LI G V +G L+ Y + G L E
Sbjct: 96 DVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSV-LGKRLVLAYLKCGDLGE 154
Query: 111 ARRVFDEMPNK--DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASA 168
AR VFD MP + D W +++S Y + GD+ EA+ +M G+ D + +
Sbjct: 155 ARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQ-EAVSLFRQMQCCGVSPDAHAVSCVLKC 213
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
+L G+ IHG+ K+G G +V N L++ YS+C DA +VF MH R+ ISW
Sbjct: 214 VSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISW 273
Query: 229 TTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
+MI + AV LF +M G + VT + ++ A + G+ +HG +K
Sbjct: 274 NSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVK 333
Query: 284 TNFL----------SEPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYA 332
+ L + ++ + L+ MY + M + +VFD +S + + WN ++ GYA
Sbjct: 334 SGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYA 393
Query: 333 QNG-----LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
+ G LSL G+ P+ + +L + + G H +I+K+G
Sbjct: 394 KVGEFEESLSLFVQMHELGI----APDEHAISCLLKCITCLS--CARDGLVAHGYIVKLG 447
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+ V +AL+ Y K I ++ VFN + +W ++IS + +G + F
Sbjct: 448 FGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFI 507
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
M +G DS+T LSVL C ++ GR
Sbjct: 508 RMWTQGQELDSVTLLSVLPACAQSRYWFAGR 538
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 167/348 (47%), Gaps = 28/348 (8%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGV----SIKMGYGTHVSVGNVLMSTYSKCEVTGD 212
+D S+ CG E++LE K+ H + S G +G L+ Y KC G+
Sbjct: 95 VDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGE 154
Query: 213 ANKVFRRMHDR--NVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAI 265
A VF M + +V WT+++S + ++AVSLF++M+ GV P+ ++ +
Sbjct: 155 ARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCV 214
Query: 266 SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWN 325
S + EG +IHGL K +V N LI +Y+R M+D+ +VFD + R+ ISWN
Sbjct: 215 SSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWN 274
Query: 326 ALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVG---------AAEDISLKH 375
++I G NG AV F + + ++ ++ T SVL A A S+K
Sbjct: 275 SMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKS 334
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF-AWTAIISALA 434
G ++ G+D D +GS L+ MY K G + ++RVF+ K W I+ A
Sbjct: 335 GLLWGLDSVQSGID-DAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYA 393
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTV-----CGRNGMIHKG 477
+ G++E ++ F +M G+ PD +L C R+G++ G
Sbjct: 394 KVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHG 441
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/636 (34%), Positives = 369/636 (58%), Gaps = 20/636 (3%)
Query: 3 MYCKSGQFDKALCIFNNLN-NPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
+Y K + A +F+ + D+VSWN+++S + + +AL M GVV +
Sbjct: 102 LYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTY 161
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T++ AL C D G+Q+H+ I+K G +VYV NAL+ MY R+G++ EA +F +
Sbjct: 162 TFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNL 221
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
KD V+WN++L+G+ Q+G Y EA+ ++ L+ D VS S A G L G
Sbjct: 222 EGKDIVTWNSMLTGFIQNGLYS-EALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNG 280
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED 238
K+IH +IK G+ +++ VGN L+ Y+KC + F M +++ISWTT + ++
Sbjct: 281 KEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQN 340
Query: 239 -----AVSLFKEMRLDGVCPNDVTFIGLIHAISIG-NLVKEGRMIHGLCIKTNFLSEPSV 292
A+ L ++++++G+ D T IG I G N + + + IHG I+ LS+P +
Sbjct: 341 KCYLQALELLRQLQMEGM-DVDATMIGSILLACRGLNCLGKIKEIHGYTIRGG-LSDPVL 398
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N +I +Y + + ++F+ + C++++SW ++IS Y NGL+ A++ F +KE+
Sbjct: 399 QNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVF-SSMKETG 457
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ T S+L+AV + +LK G+ H II+ G + + + L+DMY + GS+ +
Sbjct: 458 LEPDYVTLVSILSAVCSLS--TLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVED 515
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ ++F T+ ++ WTA+ISA HG E+ + F M+++ + PD ITFL++L C
Sbjct: 516 AYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSH 575
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G++++G+ + M +Y +EP P+HY+C+VD+LGR LEEA ++V + P V
Sbjct: 576 SGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWC 635
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGACRIH N E+GE A+ L++++ G+YVL+SN++A G W+ V +R MK G
Sbjct: 636 ALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSG 695
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
+ K G SW +VG + +H F S D HP ++IY+
Sbjct: 696 LTKNPGCSWIEVG--NKIHAFLSRDKLHPECDKIYQ 729
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 163/571 (28%), Positives = 288/571 (50%), Gaps = 33/571 (5%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL---SFALRMNLIGVVFDAVT 59
MY K G A IF+ ++ I +WN ++ G+ + +AL M +GV FD+ T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM- 118
+ L C E G ++H L +K+G DS V+V N+L+ +Y++ + AR++FD M
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
D VSWN+I+S Y+ +G EA+ EM++ G+ + +F +A AC ++LG
Sbjct: 121 VRNDVVSWNSIISAYSGNG-MCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
QIH +K G V V N L++ Y + +A +F + +++++W +M++ +
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+A+ F +++ + P+ V+ I +I A + G+ IH IK F S V
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N LI MYA+ M + FD ++ +++ISW +GYAQN L A++ + E
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359
Query: 353 PNAYTFGSV------LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+A GS+ LN +G ++I H + I+ GL SDP++ + ++D+YG+ G
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEI--------HGYTIRGGL-SDPVLQNTIIDVYGECG 410
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I + R+F + K +WT++IS +G + F M+ G+ PD +T +S+L+
Sbjct: 411 IIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILS 470
Query: 467 VCGRNGMIHKGRHLFDSML-KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ KG+ + ++ K + +E S + +VDM R G +E+A ++
Sbjct: 471 AVCSLSTLKKGKEIHGFIIRKGFILEGSISN--TLVDMYARCGSVEDAYKIF-TCTKNRN 527
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKME 556
L + +++ A +HG GE + M+M+
Sbjct: 528 LILWTAMISAYGMHG---YGEAAVELFMRMK 555
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 91/182 (50%), Gaps = 4/182 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+++Y + G D A+ IF ++ D+VSW +++S + ++ AL M G+ D
Sbjct: 403 IDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDY 462
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT + LS G ++H I++ G E + N L+ MY+R G + +A ++F
Sbjct: 463 VTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTC 522
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
N++ + W A++S Y G YG A+ + M + + DH++F + AC H +
Sbjct: 523 TKNRNLILWTAMISAYGMHG-YGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNE 581
Query: 178 GK 179
GK
Sbjct: 582 GK 583
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/671 (31%), Positives = 378/671 (56%), Gaps = 57/671 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLN--NPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVF 55
++MY K A +F +++ ++VSWN +++ + + S +AL RMNL G+
Sbjct: 49 ISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGT 108
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D VT+ + L C G ++H+ + GLDS + NAL+TMY+R+G + +A+R+F
Sbjct: 109 DHVTFVSVLGAC---SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMF 165
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ +D SWNA++ ++Q GD+ L + + M+ ++ + ++ + S + L
Sbjct: 166 QSLQTRDETSWNAVILAHSQSGDWS--GALRIFKEMKCDVKPNSTTYINVISGFSTPEVL 223
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
G++IH + G+ T + V L++ Y KC + +A +VF +M R+++SW MI
Sbjct: 224 PEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCY 283
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A+ L++++ ++G TF+ ++ A S + +GR++H ++ SE
Sbjct: 284 VLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEV 343
Query: 291 SVCNCLITMYARFESMQDSEKVF----------------------------------DEL 316
+V L+ MYA+ S++++ KVF D L
Sbjct: 344 AVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRL 403
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLK 374
R+ ISWNA+I+ Y QNG ++AA++ F + + KP+A TF +VL A + +S
Sbjct: 404 GSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLS-- 461
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
+ H+ I + L+S+ +V + L++MY + GS+ E++R+F +EK+ +WTA+++A +
Sbjct: 462 EVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFS 521
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
++G Y ++ F+EM+ +GV+PD +T+ S+L VC G + +G F M + + + P+
Sbjct: 522 QYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTA 581
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
DH++ MVD+LGR GRL +A+EL+ +P P + L ACRIHG +E+GE A+ + +
Sbjct: 582 DHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYE 641
Query: 555 MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG-LHGFSS 613
++P+ + Y+ MSN+YA G WE VA +RK M+ +G++K G S+ +V DG LH FSS
Sbjct: 642 LDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEV---DGKLHEFSS 698
Query: 614 GDNTHPRSEEI 624
G HPR++EI
Sbjct: 699 GGKYHPRTDEI 709
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 176/613 (28%), Positives = 300/613 (48%), Gaps = 44/613 (7%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D VT+ T L C + G LH I + + VGNALI+MY + LV+AR VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 116 DEMP--NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
+ M ++ VSWNA+++ Y Q+G + EA++ M +GL DHV+F S AC
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNG-HSTEALVLYWRMNLQGLGTDHVTFVSVLGACS--- 121
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+L G++IH G + S+ N L++ Y++ GDA ++F+ + R+ SW +I
Sbjct: 122 SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 234 MNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ + A+ +FKEM+ D V PN T+I +I S ++ EGR IH + F +
Sbjct: 182 AHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDT 240
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ V LI MY + S ++ +VFD++ R+++SWN +I Y NG A++ + +
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLD 300
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
E K TF S+L A + + +L G+ HSHI++ GLDS+ V +AL++MY K GS
Sbjct: 301 MEGFKRTKATFVSILGACSSVK--ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS 358
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ E+++VFN + + AW+ +I A A +G + K + G R D+I++ +++T
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSR-DTISWNAMITT 417
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG---P 524
+NG +F M ++P + +++ +GRL E + L QI
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELES 477
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ V +L+ G++E ER+ A + S+ M +++ G + L +
Sbjct: 478 NVVVTNTLINMYARCGSLEEAERLFAAAKEKTVV---SWTAMVAAFSQYGRYAEALDLFQ 534
Query: 585 GMKSKGVRK-EVGFS---------------WADVGDIDGLHGFSSGDNTHPRSEEIYRMA 628
M +GV+ +V ++ W D+ LH + P ++ M
Sbjct: 535 EMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALA------PTADHFAAMV 588
Query: 629 ECLGSEMKYLNSK 641
+ LG + ++K
Sbjct: 589 DLLGRSGRLFDAK 601
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 152/271 (56%), Gaps = 10/271 (3%)
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P++VTF+ ++ + S V EGR +H + F + V N LI+MY + +S+ D+ V
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 313 FDELSCRE--IISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAE 369
F+ + R+ ++SWNA+I+ YAQNG S A+ ++ + ++ + TF SVL A
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS--- 121
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL G+ H+ + GLDS + +AL+ MY + GS+ +++R+F Q + E +W A+
Sbjct: 122 --SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I A ++ GD+ + FKEM+ V+P+S T+++V++ ++ +GR + ++ +
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN-G 237
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ + +++M G+ G EA E+ ++
Sbjct: 238 FDTDLVVATALINMYGKCGSSHEAREVFDKM 268
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/645 (34%), Positives = 363/645 (56%), Gaps = 27/645 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M G D A IF+ ++ D +SWN++ + + ++ +++ M ++
Sbjct: 202 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 261
Query: 58 VTYSTALSFC--LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T ST LS +DH+ + G +H L+VK G DS V V N L+ MY+ GR VEA VF
Sbjct: 262 TTVSTLLSVLGHVDHQKW--GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 319
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+MP KD +SWN++++ + DG ++A+ L M+ G +++V+FTSA +AC
Sbjct: 320 KQMPTKDLISWNSLMASFVNDGR-SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 378
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E G+ +HG+ + G + +GN L+S Y K ++ +V +M R+V++W +I
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 438
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISI-GNLVKEGRMIHGLCIKTNFLSE 289
ED A++ F+ MR++GV N +T + ++ A + G+L++ G+ +H + F S+
Sbjct: 439 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 498
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG-----LSLAAVQAF 344
V N LITMYA+ + S+ +F+ L R II+WNA+++ A +G L L +
Sbjct: 499 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 558
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
FGV + ++F L+A AA+ L+ GQ+ H +K+G + D + +A DMY K
Sbjct: 559 FGV----SLDQFSFSEGLSA--AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 612
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G I E ++ + +S +W +ISAL RHG +E V F EM G++P +TF+S+
Sbjct: 613 CGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 672
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
LT C G++ KG +D + +D+ +EP+ +H C++D+LGR GRL EAE + ++P P
Sbjct: 673 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 732
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
V +SLL +C+IHGN++ G + A+ L K+EP YVL SN++A G WE V +RK
Sbjct: 733 NDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 792
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
M K ++K+ SW + D + F GD THP++ EIY E
Sbjct: 793 QMGFKNIKKKQACSWVKLK--DKVSSFGIGDRTHPQTMEIYAKLE 835
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 175/615 (28%), Positives = 310/615 (50%), Gaps = 39/615 (6%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVT 59
MY K G+ A +F+ + + VSWNT++SG + + + F +M +G+ +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 60 YSTALSFCLDHEGFLF--GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ ++ C G +F G+Q+H + K GL S+VYV A++ +Y +G + +R+VF+E
Sbjct: 61 IASLVTAC-GRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
MP+++ VSW +++ GY+ G+ E ++ + + MR +G+ + S + S+CG K+
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGE--PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
LG+QI G +K G + ++V N L+S AN +F +M +R+ ISW ++ +
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E++ +F MR N T L+ + + K GR IHGL +K F S
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VCN L+ MYA ++ VF ++ +++ISWN+L++ + +G SL A+ +I
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357
Query: 352 KP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
K N TF S L A + + G+ H ++ GL + I+G+AL+ MYGK G + E
Sbjct: 358 KSVNYVTFTSALAACFTPD--FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S+RV + + AW A+I A D + + F+ M +GV + IT +SVL+ C
Sbjct: 416 SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 475
Query: 471 NG-MIHKGRHLFDSML-----KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
G ++ +G+ L ++ D H++ S ++ M + G L +++L +
Sbjct: 476 PGDLLERGKPLHAYIVSAGFESDEHVKNS------LITMYAKCGDLSSSQDLFNGLD-NR 528
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG--SYVLMSNLYAEKGDWEMVAIL 582
+ ++L A HG+ GE + + KM G + L A +A+L
Sbjct: 529 NIITWNAMLAANAHHGH---GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA----KLAVL 581
Query: 583 RKGMKSKGVRKEVGF 597
+G + G+ ++GF
Sbjct: 582 EEGQQLHGLAVKLGF 596
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 164/605 (27%), Positives = 297/605 (49%), Gaps = 51/605 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+++Y G + +F + + ++VSW +++ G+ + ++ + M GV +
Sbjct: 101 LHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNE 160
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S +S C + G Q+ +VK GL+S++ V N+LI+M G + A +FD+
Sbjct: 161 NSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQ 220
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
M +D++SWN+I + Y Q+G +E + +MR+ ++ + ++ S GH + +
Sbjct: 221 MSERDTISWNSIAAAYAQNGH--IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK 278
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+ IHG+ +KMG+ + V V N L+ Y+ + +AN VF++M +++ISW ++++
Sbjct: 279 WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV 338
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
DA+ L M G N VTF + A + ++GR++HGL + +
Sbjct: 339 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 398
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ N L++MY + M +S +V ++ R++++WNALI GYA++ A+ AF + E
Sbjct: 399 IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 458
Query: 352 KPNAY-TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ Y T SVL+A D+ L+ G+ H++I+ G +SD V ++L+ MY K G +
Sbjct: 459 VSSNYITVVSVLSACLLPGDL-LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 517
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
SQ +FN ++ W A+++A A HG E V+ +M + GV D +F L+ +
Sbjct: 518 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAK 577
Query: 471 NGMIHKGRHLFDSMLK------DYHIEPSPDHYS------------------------CM 500
++ +G+ L +K + + D YS +
Sbjct: 578 LAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNIL 637
Query: 501 VDMLGRVGRLEEA----EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK-- 554
+ LGR G EE E++ ++ PG SLL AC G V+ G D + +
Sbjct: 638 ISALGRHGYFEEVCATFHEML-EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDF 696
Query: 555 -MEPA 558
+EPA
Sbjct: 697 GLEPA 701
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/645 (34%), Positives = 363/645 (56%), Gaps = 27/645 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M G D A IF+ ++ D +SWN++ + + ++ +++ M ++
Sbjct: 185 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 244
Query: 58 VTYSTALSFC--LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T ST LS +DH+ + G +H L+VK G DS V V N L+ MY+ GR VEA VF
Sbjct: 245 TTVSTLLSVLGHVDHQKW--GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 302
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+MP KD +SWN++++ + DG ++A+ L M+ G +++V+FTSA +AC
Sbjct: 303 KQMPTKDLISWNSLMASFVNDGR-SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 361
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E G+ +HG+ + G + +GN L+S Y K ++ +V +M R+V++W +I
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 421
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISI-GNLVKEGRMIHGLCIKTNFLSE 289
ED A++ F+ MR++GV N +T + ++ A + G+L++ G+ +H + F S+
Sbjct: 422 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 481
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG-----LSLAAVQAF 344
V N LITMYA+ + S+ +F+ L R II+WNA+++ A +G L L +
Sbjct: 482 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 541
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
FGV + ++F L+A AA+ L+ GQ+ H +K+G + D + +A DMY K
Sbjct: 542 FGV----SLDQFSFSEGLSA--AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 595
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G I E ++ + +S +W +ISAL RHG +E V F EM G++P +TF+S+
Sbjct: 596 CGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 655
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
LT C G++ KG +D + +D+ +EP+ +H C++D+LGR GRL EAE + ++P P
Sbjct: 656 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 715
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
V +SLL +C+IHGN++ G + A+ L K+EP YVL SN++A G WE V +RK
Sbjct: 716 NDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 775
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
M K ++K+ SW + D + F GD THP++ EIY E
Sbjct: 776 QMGFKNIKKKQACSWVKLK--DKVSSFGIGDRTHPQTMEIYAKLE 818
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 164/605 (27%), Positives = 297/605 (49%), Gaps = 51/605 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+++Y G + +F + + ++VSW +++ G+ + ++ + M GV +
Sbjct: 84 LHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNE 143
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S +S C + G Q+ +VK GL+S++ V N+LI+M G + A +FD+
Sbjct: 144 NSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQ 203
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
M +D++SWN+I + Y Q+G +E + +MR+ ++ + ++ S GH + +
Sbjct: 204 MSERDTISWNSIAAAYAQNGH--IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK 261
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+ IHG+ +KMG+ + V V N L+ Y+ + +AN VF++M +++ISW ++++
Sbjct: 262 WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV 321
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
DA+ L M G N VTF + A + ++GR++HGL + +
Sbjct: 322 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 381
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ N L++MY + M +S +V ++ R++++WNALI GYA++ A+ AF + E
Sbjct: 382 IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 441
Query: 352 KPNAY-TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ Y T SVL+A D+ L+ G+ H++I+ G +SD V ++L+ MY K G +
Sbjct: 442 VSSNYITVVSVLSACLLPGDL-LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 500
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
SQ +FN ++ W A+++A A HG E V+ +M + GV D +F L+ +
Sbjct: 501 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAK 560
Query: 471 NGMIHKGRHLFDSMLK------DYHIEPSPDHYS------------------------CM 500
++ +G+ L +K + + D YS +
Sbjct: 561 LAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNIL 620
Query: 501 VDMLGRVGRLEEA----EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK-- 554
+ LGR G EE E++ ++ PG SLL AC G V+ G D + +
Sbjct: 621 ISALGRHGYFEEVCATFHEML-EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDF 679
Query: 555 -MEPA 558
+EPA
Sbjct: 680 GLEPA 684
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 169/592 (28%), Positives = 299/592 (50%), Gaps = 39/592 (6%)
Query: 26 VSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLF--GLQLH 80
VSWNT++SG + + + F +M +G+ + ++ ++ C G +F G+Q+H
Sbjct: 7 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTAC-GRSGSMFREGVQVH 65
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
+ K GL S+VYV A++ +Y +G + +R+VF+EMP+++ VSW +++ GY+ G+
Sbjct: 66 GFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE-- 123
Query: 141 VEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
E ++ + + MR +G+ + S + S+CG K+ LG+QI G +K G + ++V N
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENS 183
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPN 254
L+S AN +F +M +R+ ISW ++ + + E++ +F MR N
Sbjct: 184 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVN 243
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
T L+ + + K GR IHGL +K F S VCN L+ MYA ++ VF
Sbjct: 244 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 303
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISL 373
++ +++ISWN+L++ + +G SL A+ +I K N TF S L A +
Sbjct: 304 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD--FF 361
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
+ G+ H ++ GL + I+G+AL+ MYGK G + ES+RV + + AW A+I
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 421
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG-MIHKGRHLFDSML-----KD 487
A D + + F+ M +GV + IT +SVL+ C G ++ +G+ L ++ D
Sbjct: 422 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 481
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGER 547
H++ S ++ M + G L +++L + + ++L A HG+ GE
Sbjct: 482 EHVKNS------LITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH---GEE 531
Query: 548 IADALMKMEPAGSG--SYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGF 597
+ + KM G + L A +A+L +G + G+ ++GF
Sbjct: 532 VLKLVSKMRSFGVSLDQFSFSEGLSAAA----KLAVLEEGQQLHGLAVKLGF 579
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 200/411 (48%), Gaps = 11/411 (2%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL-E 176
MP ++ VSWN ++SG + G Y +E + +M G++ S +ACG ++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLY-LEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFR 59
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
G Q+HG K G + V V ++ Y + + KVF M DRNV+SWT+++
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E+ + ++K MR +GV N+ + +I + + GR I G +K+ S+ +
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
V N LI+M ++ + +FD++S R+ ISWN++ + YAQNG + + F + +
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ N+ T ++L+ +G + K G+ H ++K+G DS V + LL MY G E
Sbjct: 240 DEVNSTTVSTLLSVLGHVDH--QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 297
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ VF + K +W +++++ G + M + G + +TF S L C
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
KGR + ++ + + + +V M G++G + E+ ++ Q+P
Sbjct: 358 PDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 232/655 (35%), Positives = 359/655 (54%), Gaps = 15/655 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y KSG +A +F+ + V+W ++ G+ + + +A ++M G D VT+
Sbjct: 93 YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 152
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
T LS C HE Q+ + I+K G DS + VGN L+ Y + RL A ++F EMP
Sbjct: 153 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE 212
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
DSVS+NA+++GY++DG +A+ +EM GL+ +F + A ++ LG+Q
Sbjct: 213 IDSVSYNAMITGYSKDG-LDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQ 271
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-- 238
IH IK + +V V N L+ YSK + DA K+F M +++ +S+ +IS D
Sbjct: 272 IHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGK 331
Query: 239 ---AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
A LF+E++ F ++ S + GR IH I T SE V N
Sbjct: 332 HKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNS 391
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PN 354
L+ MYA+ +++E +F L+ R + W A+IS Y Q G +Q F + + S +
Sbjct: 392 LVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIAD 451
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
TF S+L A + +SL G++ HS IIK G S+ GSALLD+Y K GSI ++ +
Sbjct: 452 QATFASLLRASASIASLSL--GKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQT 509
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F E +++ +W A+ISA A++G+ E+ + FKEM G++PDS++FL VL+ C +G++
Sbjct: 510 FQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLV 569
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+G F+SM + Y ++P +HY+ +VDML R GR EAE+L+ ++P P + S+L
Sbjct: 570 EEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLN 629
Query: 535 ACRIHGNVEMGERIADALMKMEP-AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
ACRIH N E+ R AD L ME + YV MSN+YA G WE V+ + K M+ +GV+K
Sbjct: 630 ACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKK 689
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+SW ++ H FS+ D HP+ EEI + + L M+ L K + + AL
Sbjct: 690 LPAYSWVEIK--HETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCAL 742
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 247/484 (51%), Gaps = 57/484 (11%)
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG-- 140
IVK G D + N + + + G L +AR++F++MP+K++VS N ++SGY + G+ G
Sbjct: 43 IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 102
Query: 141 ----------------------------VEAILALIEMMRKGLRLDHVSFTSAASAC-GH 171
EA ++M R G D+V+F + S C GH
Sbjct: 103 RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH 162
Query: 172 EKNLELGKQIHGVS---IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
E+G QI V IK+GY + + VGN L+ +Y K A ++F+ M + + +S+
Sbjct: 163 ----EMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSY 218
Query: 229 TTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCI 282
MI+ +D AV+LF EM+ G+ P + TF ++ A I + ++V G+ IH I
Sbjct: 219 NAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVL-GQQIHSFVI 277
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
KTNF+ V N L+ Y++ +S+ D+ K+FDE+ ++ +S+N +ISGYA +G A
Sbjct: 278 KTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYA-- 335
Query: 343 AFFGVIKESKPNA-----YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
F + +E + A + F ++L+ A+ + + G++ H+ I DS+ +VG++
Sbjct: 336 --FDLFRELQFTAFDRKQFPFATMLSI--ASNTLDWEMGRQIHAQTIVTTADSEILVGNS 391
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L+DMY K G E++ +F +S WTA+ISA + G YE + F +M V D
Sbjct: 392 LVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIAD 451
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
TF S+L + G+ L ++K + + S ++D+ + G +++A +
Sbjct: 452 QATFASLLRASASIASLSLGKQLHSFIIKSGFMS-NVFSGSALLDVYAKCGSIKDAVQTF 510
Query: 518 GQIP 521
++P
Sbjct: 511 QEMP 514
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 103/182 (56%), Gaps = 6/182 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G+F++A IF NL + V W ++S + + ++ L +M V+ D
Sbjct: 393 VDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQ 452
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ L G QLHS I+K G S V+ G+AL+ +Y++ G + +A + F E
Sbjct: 453 ATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQE 512
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAIL-ALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP+++ VSWNA++S Y Q+G+ EA L + EM+ GL+ D VSF SAC H +E
Sbjct: 513 MPDRNIVSWNAMISAYAQNGE--AEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVE 570
Query: 177 LG 178
G
Sbjct: 571 EG 572
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 15/268 (5%)
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSV-CNCLITMYARFESMQDSEKVFDELSCREIISWN 325
+GN +K G + + + +V N +I+ Y + ++ ++ K+FD + R ++W
Sbjct: 59 VGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWT 118
Query: 326 ALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII 384
LI GY+Q A + F + + ++P+ TF ++L+ E + + II
Sbjct: 119 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHE--MGNQITQVQTQII 176
Query: 385 KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMN 444
K+G DS IVG+ L+D Y K + + ++F E E ++ A+I+ ++ G E +N
Sbjct: 177 KLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVN 236
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNGM--IHKGRHLFDSMLKD---YHIEPSPDHYSC 499
F EM+N G++P TF +VL C G+ I G+ + ++K +++ S +
Sbjct: 237 LFVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLGQQIHSFVIKTNFVWNVFVS----NA 290
Query: 500 MVDMLGRVGRLEEAEELVGQIPGGPGLS 527
++D + + +A +L ++P G+S
Sbjct: 291 LLDFYSKHDSVIDARKLFDEMPEQDGVS 318
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/632 (35%), Positives = 343/632 (54%), Gaps = 80/632 (12%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD- 138
H+ I+K + E ++ N L++ Y+R GRL +ARRVFDE+P +++ S+NA+LS Y + G
Sbjct: 40 HARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRP 99
Query: 139 -------------------------------YGVEAILALIEMMRKGLRLDHVSFTSAAS 167
+ +A+ L M L+ SF SA S
Sbjct: 100 DEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALS 159
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
AC EK+ G+Q+HG+ + + V + + L+ Y+KCE DA +VF M +RNV+S
Sbjct: 160 ACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVS 219
Query: 228 WTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
W ++I+ + +A+ LF EM G P++VT ++ A + +EGR +H +
Sbjct: 220 WNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMV 279
Query: 283 KTNFLSEPSVC-NCLITMYAR----------FESM---------------------QDSE 310
K + L + V N L+ MYA+ F+SM +D++
Sbjct: 280 KCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQ 339
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAE 369
VF ++ + +I+WN LI+ YAQNG A++ F + ++S P YT+G+VLNA G
Sbjct: 340 VVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIA 399
Query: 370 DISLKHGQRCHSHIIKVGL------DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
D+ L GQ+ H H++K G +SD VG++L+DMY K GSI + +VF +
Sbjct: 400 DLQL--GQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDN 457
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
+W A+I A++G + ++ F+ M PDS+T + VL+ CG +G++ +GR F S
Sbjct: 458 VSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHS 517
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
M +D+ I PS DHY+CMVD+LGR G L+EAEEL+ +P P + SLLGACR+H NVE
Sbjct: 518 MTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKNVE 577
Query: 544 MGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG 603
+GE A L +++P SG YVL+SN+YAE G W V +R+ MK +GV K+ G SW ++G
Sbjct: 578 LGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWIEIG 637
Query: 604 DIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
++ F + D HP EI+ + EM
Sbjct: 638 --RKMNVFLARDKRHPCRNEIHNTLRIIQMEM 667
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 245/493 (49%), Gaps = 58/493 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK-----SDDALSFALRMNLIGVVF 55
++ Y + G+ D+A +F + +PD S+N V++ + + DAL F M+ V
Sbjct: 90 LSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVL 149
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+A ++++ALS C + G Q+H L+ + +V++ +AL+ MY++ R +ARRVF
Sbjct: 150 NAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVF 209
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D MP ++ VSWN++++ Y Q+G G EA++ +EMM G D V+ +S SAC
Sbjct: 210 DAMPERNVVSWNSLITCYEQNGPVG-EALMLFVEMMAAGFSPDEVTLSSVMSACAGLAAD 268
Query: 176 ELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVT------------------------ 210
G+Q+H +K + + N L+ Y+KC T
Sbjct: 269 REGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTG 328
Query: 211 -------GDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTF 258
DA VF +M ++NVI+W +I+ E+A+ LF +++ D + P T+
Sbjct: 329 YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTY 388
Query: 259 IGLIHAISIGNL--VKEGRMIHGLCIKTNFL------SEPSVCNCLITMYARFESMQDSE 310
+++A GN+ ++ G+ H +K F S+ V N L+ MY + S+ D
Sbjct: 389 GNVLNA--CGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGA 446
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAE 369
KVF+ ++ R+ +SWNA+I GYAQNG + A+ F ++ P++ T VL+A G +
Sbjct: 447 KVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSG 506
Query: 370 DISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE-TQEKSEFAWT 427
+ G+R HS G+ + ++D+ G+ G + E++ + N+ E W
Sbjct: 507 LVD--EGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWA 564
Query: 428 AIISALARHGDYE 440
+++ A H + E
Sbjct: 565 SLLGACRLHKNVE 577
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 147/339 (43%), Gaps = 42/339 (12%)
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
R H +K+ E + N L++ YAR ++D+ +VFDE+ R S+NAL+S YA+
Sbjct: 36 ARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYAR 95
Query: 334 NGLSLAAVQAFFGVIKESKP-----------------------------------NAYTF 358
G A +A F I + NAY+F
Sbjct: 96 LGRPDEA-RALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSF 154
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
S L+A A +D + G++ H + + D + SAL+DMY K +++RVF+
Sbjct: 155 ASALSACAAEKDS--RTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAM 212
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
E++ +W ++I+ ++G + F EM G PD +T SV++ C +GR
Sbjct: 213 PERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGR 272
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRI 538
+ M+K + + +VDM + GR EA + +P +S L G +
Sbjct: 273 QVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAK- 331
Query: 539 HGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
NVE + + +M ++ ++ YA+ G+ E
Sbjct: 332 SANVEDAQVV---FSQMVEKNVIAWNVLIAAYAQNGEEE 367
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 25/219 (11%)
Query: 342 QAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
Q ++ S P A S N GA + H+ I+K + + + + L+
Sbjct: 11 QELVAHLRASSPLADLLRSAPNLSGA---------RAAHARILKSPVAGETFLLNTLVST 61
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y + G + +++RVF+E ++ F++ A++SA AR G + F+ + + PD ++
Sbjct: 62 YARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPD----PDQCSY 117
Query: 462 LSVLTVCGRNGMIHKGR--------HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+V+ R+G H H D +L Y + +C + R G E+
Sbjct: 118 NAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALS--ACAAEKDSRTG--EQV 173
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
LV + P + + +L+ E R+ DA+
Sbjct: 174 HGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAM 212
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/626 (34%), Positives = 353/626 (56%), Gaps = 72/626 (11%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
+LH LI+K + E ++ N LI YS+ G + AR VFD+MP +S SWN +LS Y++ G
Sbjct: 26 KLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSG 85
Query: 138 D----------------------------YG--VEAILALIEMMRKG-LRLDHVSFTSAA 166
D YG VEA+ MM+ G L L+ ++F++
Sbjct: 86 DLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTML 145
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV- 225
+ ++LG+QIHG +K G+G +V VG+ L+ Y+K + A++VF + +RNV
Sbjct: 146 LLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVV 205
Query: 226 ------------------------------ISWTTMIS---MN--REDAVSLFKEMRLDG 250
ISWTTMI+ N +A+ LF++MR +G
Sbjct: 206 MYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEG 265
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
+ + TF ++ A +KEG+ IH L I++ + V + L+ MY + S++ +E
Sbjct: 266 MAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAE 325
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAE 369
VF ++ + ++SW A++ GY QNG S AV+ F + + +P+ +T GSV+++ A
Sbjct: 326 AVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISS--CAN 383
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL+ G + H + GL S V +AL+ +YGK GSI +S ++F+E + E +WTA+
Sbjct: 384 LASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTAL 443
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
+S A+ G ++ F+ M +G++PD++TF++VL+ C R G++ +G+ F+SMLKD+
Sbjct: 444 VSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHG 503
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I P DHY+CM+D+ GR GRLEEA+ + ++P P +LL +CR++GN E+G+ A
Sbjct: 504 IIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAA 563
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
++L++++P Y+L+S++YA KG W VA LR+GM+ KG RKE GFSW + ++
Sbjct: 564 ESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSW--IKYKSKVY 621
Query: 610 GFSSGDNTHPRSEEIYRMAECLGSEM 635
FS+ D + P S++IY E L +M
Sbjct: 622 IFSADDQSSPFSDQIYAELEKLNHKM 647
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 146/483 (30%), Positives = 253/483 (52%), Gaps = 46/483 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVV-FD 56
++ Y KSG IF+ + N D VSWN+++SG+ + N + GV+ +
Sbjct: 78 LSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLN 137
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T+ST L G Q+H IVKFG + V+VG++L+ MY++ G + A +VFD
Sbjct: 138 RITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFD 197
Query: 117 E-------------------------------MPNKDSVSWNAILSGYTQDGDYGVEAIL 145
E M +DS+SW +++G Q+G EA+
Sbjct: 198 EVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNG-LEAEAMD 256
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
+M ++G+ +D +F S +ACG + L+ GK+IH + I+ GY +V VG+ L+ Y
Sbjct: 257 LFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYC 316
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIG 260
KC A VF+RM ++NV+SWT M+ + E+AV +F +M+ +G+ P+D T
Sbjct: 317 KCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGS 376
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
+I + + ++EG H + + +S +V N LIT+Y + S++DS ++FDE+S R+
Sbjct: 377 VISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRD 436
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRC 379
+SW AL+SGYAQ G + + F ++ + KP+A TF +VL+A A + + GQ+
Sbjct: 437 EVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLV--ERGQQY 494
Query: 380 HSHIIKV-GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHG 437
++K G+ + ++D++G+ G + E++ N+ W ++S+ +G
Sbjct: 495 FESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554
Query: 438 DYE 440
+ E
Sbjct: 555 NEE 557
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 214/519 (41%), Gaps = 118/519 (22%)
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C +N K++H + IK + N L++ YSK A VF +M N SW
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 229 TTMISM------------------NRE------------------DAVSLFKEMRLDGVC 252
TM+S NR+ +AV + M DGV
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 253 P-NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR--------- 302
N +TF ++ +S V GR IHG +K F + V + L+ MYA+
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 303 -FESMQ---------------------DSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
F+ +Q DS+++F + R+ ISW +I+G QNGL A
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254
Query: 341 VQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
+ F + +E + YTFGSVL A G +LK G+ H+ II+ G + + VGSAL+
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLR--ALKEGKEIHTLIIRSGYNHNVFVGSALV 312
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K S+ ++ VF K+ +WTA++ ++G E + F +M+ G+ PD
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDF 372
Query: 460 TFLSVLTVC-----------------------------------GRNGMIHKGRHLFDSM 484
T SV++ C G+ G I LFD M
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ--IPG-GPGLSVLQSLLGACRIHGN 541
+ E S ++ +V + G+ E +L + + G P ++L AC G
Sbjct: 433 --SFRDEVS---WTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGL 487
Query: 542 VEMGERIADALMK---MEPAGSGSYVLMSNLYAEKGDWE 577
VE G++ ++++K + P S Y M +L+ G E
Sbjct: 488 VERGQQYFESMLKDHGIIPF-SDHYTCMIDLFGRAGRLE 525
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/662 (34%), Positives = 370/662 (55%), Gaps = 23/662 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MYCK G+ D A +F+ + ++VSWN+++SG+ + + ++ + + D T
Sbjct: 63 MYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFT 122
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+S ALS C G +H+LI GL V + N+LI MY + GR+ AR VF+
Sbjct: 123 FSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESAD 182
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG--HEKNLEL 177
DSVSWN++++GY + G E + L++M+R GL L+ + SA ACG ++E
Sbjct: 183 ELDSVSWNSLIAGYVRIGSND-EMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIEC 241
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GK +HG ++K+G V VG L+ TY+K DA K+F+ M D NV+ + MI
Sbjct: 242 GKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ 301
Query: 233 --SMNRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+M E +A+ LF EM+ G+ P++ TF ++ A S + G+ IH K N
Sbjct: 302 METMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQ 361
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S+ + N L+ +Y+ S++D K F +++SW +LI G+ QNG + F +
Sbjct: 362 SDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL 421
Query: 348 I-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ KP+ +T +L+A A ++K G++ H++ IK G+ + I+ ++ + MY K G
Sbjct: 422 LFSGRKPDEFTISIMLSA--CANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCG 479
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I + F ET+ +W+ +IS+ A+HG + ++ F+ M+ G+ P+ ITFL VL
Sbjct: 480 DIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLV 539
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G++ +G F+ M KD+ I P+ H +C+VD+LGR GRL EAE + G G
Sbjct: 540 ACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMD-SGFEGD 598
Query: 527 SVL-QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
V+ +SLL ACR+H + G+R+A+ ++++EP + SYVL+ N+Y + G +R
Sbjct: 599 PVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNL 658
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
MK +GV+KE G SW +VG++ +H F +GD +HP S+ IY E + E+K L+ E+
Sbjct: 659 MKDRGVKKEPGLSWIEVGNV--VHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKL 716
Query: 646 IA 647
++
Sbjct: 717 VS 718
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 224/450 (49%), Gaps = 18/450 (4%)
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
+G+ D+VTY T L C G L G H ++K +++ N L+ MY + G
Sbjct: 13 LGLPLDSVTY-TKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETD 71
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
A+++FD MP ++ VSWN+++SGYTQ G Y E + E LRLD +F++A S C
Sbjct: 72 VAKKLFDRMPKRNVVSWNSLISGYTQMGFYH-EVMNLFKEARMSDLRLDKFTFSNALSVC 130
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
G +L LG+ IH + G G V + N L+ Y KC A VF + + +SW
Sbjct: 131 GRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWN 190
Query: 230 TMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI--SIGNLVKEGRMIHGLCI 282
++I+ + ++ + L +M G+ N + A + + ++ G+M+HG +
Sbjct: 191 SLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAV 250
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ-----NGLS 337
K + V L+ YA+ ++D+ K+F + ++ +NA+I+G+ Q + +
Sbjct: 251 KLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFA 310
Query: 338 LAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
A+ FF + KP+ +TF S+L A E + + G++ H+ I K L SD +G+
Sbjct: 311 NEAMYLFFEMQSRGMKPSEFTFSSILKACSTIE--AFECGKQIHAQIFKYNLQSDEFIGN 368
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
AL+++Y GSI + + F+ T + +WT++I ++G +E + F E+ G +P
Sbjct: 369 ALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKP 428
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
D T +L+ C + G + +K
Sbjct: 429 DEFTISIMLSACANLAAVKSGEQIHAYAIK 458
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 224/455 (49%), Gaps = 23/455 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MYCK G+ D A +F + + D VSWN++++G+ + +D+ L ++M G+ ++
Sbjct: 162 IDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNS 221
Query: 58 VTYSTALSFCLDH--EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+AL C + G LH VK GLD +V VG AL+ Y++ G L +A ++F
Sbjct: 222 YALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIF 281
Query: 116 DEMPNKDSVSWNAILSGYTQ----DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
MP+ + V +NA+++G+ Q ++ EA+ EM +G++ +F+S AC
Sbjct: 282 KLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACST 341
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+ E GKQIH K + +GN L+ YS D K F +V+SWT++
Sbjct: 342 IEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSL 401
Query: 232 I-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I + E ++LF E+ G P++ T ++ A + VK G IH IKT
Sbjct: 402 IVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGI 461
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ + N I MYA+ + + F E +I+SW+ +IS AQ+G + AV F
Sbjct: 462 GNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVD-LFE 520
Query: 347 VIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV--GSALLDMY 402
++K S PN TF VL V + ++ G R + I+K P V + ++D+
Sbjct: 521 LMKGSGIAPNHITFLGVL--VACSHGGLVEEGLR-YFEIMKKDHGITPNVKHSACIVDLL 577
Query: 403 GKRGSIFESQR-VFNETQEKSEFAWTAIISALARH 436
G+ G + E++ + + E W +++SA H
Sbjct: 578 GRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVH 612
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 8/199 (4%)
Query: 353 PNAYTFGSVLNAVGAAEDI-------SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
P Y G L++V + + SL HG+ H H+IK + + LL MY K
Sbjct: 8 PQPYYLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKC 67
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G ++++F+ +++ +W ++IS + G Y VMN FKE +R D TF + L
Sbjct: 68 GETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNAL 127
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+VCGR + GR L +++ + + ++DM + GR++ A +
Sbjct: 128 SVCGRTLDLRLGR-LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDS 186
Query: 526 LSVLQSLLGACRIHGNVEM 544
+S + G RI N EM
Sbjct: 187 VSWNSLIAGYVRIGSNDEM 205
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/632 (35%), Positives = 342/632 (54%), Gaps = 80/632 (12%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD- 138
H ++K + E ++ N L++ Y+R GRL EARRVFD +P +++ S+NA+LS Y + G
Sbjct: 40 HGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRP 99
Query: 139 -------------------------------YGVEAILALIEMMRKGLRLDHVSFTSAAS 167
+ +A+ L M L+ SF SA S
Sbjct: 100 DEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALS 159
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
AC EK+L G+Q+HG+ + + V +G L+ Y+KCE DA +VF M +RNV+S
Sbjct: 160 ACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVS 219
Query: 228 WTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
W ++I+ + +A+ LF EM G P++VT ++ A + +EGR +H +
Sbjct: 220 WNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMV 279
Query: 283 KTNFLSEPSVCN-CLITMYAR----------FESM---------------------QDSE 310
K + L + V N L+ MYA+ F+SM +D++
Sbjct: 280 KRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQ 339
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAE 369
VF ++ + +I+WN LI+ YAQNG A++ F + ++S P YT+G+VLNA G
Sbjct: 340 VVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIA 399
Query: 370 DISLKHGQRCHSHIIKVGL------DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
+ L GQ+ H H++K G +SD VG++L+DMY K GSI + +VF +
Sbjct: 400 VLQL--GQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDN 457
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
+W A+I A++G + ++ F+ M PDS+T + VL+ CG +G++ +GR F
Sbjct: 458 VSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHF 517
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
M +D+ I PS DHY+CMVD+LGR G L+EAEEL+ +P P + SLLGACR+H NVE
Sbjct: 518 MTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVE 577
Query: 544 MGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG 603
+GER A L +++P SG YVL+SN+YAE G W V +R+ MK +GV K+ G SW ++G
Sbjct: 578 LGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIG 637
Query: 604 DIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
++ F + DN HP EI+ + EM
Sbjct: 638 --SKMNVFLARDNRHPCRNEIHSTLRIIQMEM 667
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 242/492 (49%), Gaps = 56/492 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK-----SDDALSFALRMNLIGVVF 55
++ Y + G+ D+A +F + +PD S+N V++ + + DAL F M+ V
Sbjct: 90 LSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVL 149
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+A ++++ALS C + G Q+H L+ + +V++G AL+ MY++ R V+ARRVF
Sbjct: 150 NAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVF 209
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D MP ++ VSWN++++ Y Q+G G EA++ +EMM G D V+ +S SAC
Sbjct: 210 DAMPERNVVSWNSLITCYEQNGPVG-EALVLFVEMMATGFFPDEVTLSSVMSACAGLAAE 268
Query: 176 ELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVT------------------------ 210
G+Q+H +K + + N L+ Y+KC T
Sbjct: 269 REGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAG 328
Query: 211 -------GDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTF 258
DA VF +M ++NVI+W +I+ E+A+ LF +++ D + P T+
Sbjct: 329 YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTY 388
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTNFL------SEPSVCNCLITMYARFESMQDSEKV 312
+++A +++ G+ H +K F S+ V N L+ MY + S+ D KV
Sbjct: 389 GNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKV 448
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDI 371
F+ ++ R+ +SWNA+I GYAQNG + A+ F ++ P++ T VL+A G +
Sbjct: 449 FERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHS--- 505
Query: 372 SLKHGQRCHSHIIKV--GLDSDPIVGSALLDMYGKRGSIFESQRVFNE-TQEKSEFAWTA 428
L R H H + G+ + ++D+ G+ G + E++ + + E W +
Sbjct: 506 GLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWAS 565
Query: 429 IISALARHGDYE 440
++ A H + E
Sbjct: 566 LLGACRLHKNVE 577
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 149/339 (43%), Gaps = 42/339 (12%)
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
R HG +K+ E + N L++ YAR ++++ +VFD + R S+NAL+S YA+
Sbjct: 36 ARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYAR 95
Query: 334 NGLSLAAVQAFFGVIKESKP-----------------------------------NAYTF 358
G A +A F I + NAY+F
Sbjct: 96 LGRPDEA-RALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSF 154
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
S L+A A +D L+ G++ H + + D +G+AL+DMY K +++RVF+
Sbjct: 155 ASALSACAAEKD--LRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAM 212
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
E++ +W ++I+ ++G + F EM G PD +T SV++ C +GR
Sbjct: 213 PERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGR 272
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRI 538
+ M+K + + +VDM + GR EA + +P +S L G +
Sbjct: 273 QVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAK- 331
Query: 539 HGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
NVE + + +M ++ ++ YA+ G+ E
Sbjct: 332 SANVEDAQVV---FSQMVEKNVIAWNVLIAAYAQNGEEE 367
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/645 (33%), Positives = 366/645 (56%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+N Y K G A +F+ + + +WN+++S + E+S +A RM G D
Sbjct: 202 VNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDR 261
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ + L C++ E G + I + + +++VG ALITMY+R +A +VF
Sbjct: 262 VTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGR 321
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + ++W+AI++ + G G EA+ M ++G+ + V+F S + LE
Sbjct: 322 MKQTNLITWSAIITAFADHGHCG-EALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEE 380
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
+IH + + G ++ N L++ Y +CE DA VF ++ N+ISW +MI +
Sbjct: 381 LSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQ 440
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+DA+ LF+ M+ G+ P+ V F+ ++ A +IG+ + +++H ++ P V
Sbjct: 441 CERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLV 500
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
L+ MYA+ + +E + E+ ++I +WN LI+GYA +G S A++A+ + E+
Sbjct: 501 QTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAI 560
Query: 353 P-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P + TF SVLNA ++ SL G+ HS+ ++ GLDSD IV +AL +MY K GS+ +
Sbjct: 561 PVDKVTFISVLNACTSS--TSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENA 618
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+R+F+ +S +W ++ A A+HG+ E V+ ++ME +GV+ + ITF+SVL+ C
Sbjct: 619 RRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHA 678
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G+I +G F S+ D IE +HY C+VD+LGR G+L+EAE+ + ++P PG+ S
Sbjct: 679 GLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWAS 738
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGACR+ +++ G+ A L++++P S + V++SN+Y+E+GDW+ A LR+ M S+ V
Sbjct: 739 LLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRV 798
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K G S V + +H F D +HPR+ EIY E L M+
Sbjct: 799 KKVPGISSIQVK--NKVHEFRVRDTSHPRAAEIYDKVEELCFAMR 841
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 157/576 (27%), Positives = 281/576 (48%), Gaps = 32/576 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFAL----RMNLIGVVFD 56
+NMY K G A +F + ++V+WN +L + A+ RM L GV +
Sbjct: 100 LNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKAN 159
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T+ L+ +D + G +HS + + +V+V AL+ Y++ G L +AR+VFD
Sbjct: 160 VITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFD 219
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP + +WN+++S Y+ G EA M ++G R D V+F S AC + + L+
Sbjct: 220 GMPCRSVGTWNSMISAYSISERSG-EAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQ 278
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
GK + + + + VG L++ Y++C DA +VF RM N+I+W+ +I+
Sbjct: 279 HGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFA 338
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +A+ F+ M+ +G+ PN VTFI L++ + + ++E IH L + +
Sbjct: 339 DHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTT 398
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ N L+ +Y R ES D+ VFD+L +ISWN++I Y Q A+Q F + ++
Sbjct: 399 MRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQG 458
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQR---CHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+P+ F ++L A HG+ H + + GL P+V ++L++MY K G
Sbjct: 459 IQPDRVNFMTILGACTIG-----SHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGE 513
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ + E E+ AW +I+ A HG + +++++ + + D +TF+SVL
Sbjct: 514 LDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNA 573
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDH----YSCMVDMLGRVGRLEEAEELVGQIPGG 523
C + + +G+ M+ +E D + + +M + G +E A + +P
Sbjct: 574 CTSSTSLAEGK-----MIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIR 628
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+S +L A HG E + + KME G
Sbjct: 629 SAVS-WNGMLQAYAQHGE---SEEVLKLIRKMEQEG 660
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/529 (27%), Positives = 274/529 (51%), Gaps = 16/529 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVT 59
MY + G A+ F + ++VSWN ++S + + +AL+ M L GV +A+T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
L+ C G+ +H+L ++ G V AL+ MY + G L++A+ VF+EM
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
K+ V+WNA+L Y+ G A+ M+ +G++ + ++F + ++ L GK
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM----- 234
IH + + V V L++TY+KC DA KVF M R+V +W +MIS
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A +F+ M+ +G + VTF+ ++ A ++ G+ + +T+F + V
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGT 300
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LITMYAR S +D+ +VF + +I+W+A+I+ +A +G A++ F + +E P
Sbjct: 301 ALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILP 360
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N TF S+LN G L+ R H I + GLD + +AL+++YG+ S +++
Sbjct: 361 NRVTFISLLN--GFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDART 418
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC--GRN 471
VF++ + + +W ++I + ++ + F+ M+ +G++PD + F+++L C G +
Sbjct: 419 VFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSH 478
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
G + R L +++ + SP + +V+M + G L+ AE ++ ++
Sbjct: 479 G---RTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEM 524
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/644 (33%), Positives = 356/644 (55%), Gaps = 14/644 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M+ + G A +F + D+ SWN ++ G+ K+ D+AL R+ G+ D
Sbjct: 76 LSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDV 135
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L C + G ++H+ +V+F D +V V NALITMY + G +V AR +FD+
Sbjct: 136 YTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDK 195
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D +SWNA++SGY ++ D +E + M + D ++ TS SAC + L
Sbjct: 196 MPTRDRISWNAMISGYFEN-DECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERL 254
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G Q+H ++ Y ++SV N L+ Y +A VF M R+V+SWTT+IS
Sbjct: 255 GTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVD 314
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + A+ +K M + G P++VT ++ A + + G +H L +T + V
Sbjct: 315 NLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVV 374
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N LI MY++ + ++ + ++F ++ +++ISW ++I+G N A+ F +I +SK
Sbjct: 375 ANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSK 434
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN+ T S L+A A +L G+ H+H +K G+ D + +A+LD+Y + G + +
Sbjct: 435 PNSVTLISALSA--CARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTAL 492
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
FN EK AW +++ A+ G VM FK M + PD +TF+S+L C R+G
Sbjct: 493 NQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSG 551
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
M+ +G F M +YHI P+ HY+C+VD+LGR G+L EA E + ++P P ++ +L
Sbjct: 552 MVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGAL 611
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L ACRIH +V +GE A + K + G Y+L+ NLYA+ G W+ VA +R+ MK +G+
Sbjct: 612 LNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLI 671
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ G SW +V +H F SGDN HP+ +EI + E +MK
Sbjct: 672 VDPGCSWVEVK--GKVHAFLSGDNFHPQMQEINVVLEGFYEKMK 713
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 204/401 (50%), Gaps = 10/401 (2%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
V +GNAL++M+ R+G + A VF M +D SWN ++ GYT+ G + EA+ ++
Sbjct: 69 VRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFD-EALCLYHRIL 127
Query: 152 RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
G+R D +F S +C +L G+++H ++ + V V N L++ Y KC
Sbjct: 128 WAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVV 187
Query: 212 DANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
A +F +M R+ ISW MIS E + + LF MR + P+ +T +I A
Sbjct: 188 SARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACE 247
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNA 326
+ + G +H ++T + SV N LI MY +++E VF + CR+++SW
Sbjct: 248 LLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTT 307
Query: 327 LISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
+ISG N L A++ + + I + P+ T SVL+A + + + G + H +
Sbjct: 308 IISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDM--GMKLHELAER 365
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
G +V ++L+DMY K I ++ +F++ +K +WT++I+ L + +
Sbjct: 366 TGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIF 425
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
F++M K +P+S+T +S L+ C R G + G+ + LK
Sbjct: 426 FRKMILKS-KPNSVTLISALSACARVGALMCGKEIHAHALK 465
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 112/276 (40%), Gaps = 49/276 (17%)
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+G+ALL M+ + G + + VF E+ F+W ++ + G ++ + + + G
Sbjct: 71 LGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAG 130
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+RPD TF SVL C + +GR + +++ + + D + ++ M + G + A
Sbjct: 131 IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVR-FDFDMDVDVVNALITMYVKCGDVVSA 189
Query: 514 EELVGQIPG----------------------------------GPGLSVLQSLLGACRIH 539
L ++P P L + S++ AC +
Sbjct: 190 RMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELL 249
Query: 540 GNVEMGERIADALMKMEPAGSGS-YVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
G+ +G ++ +++ G+ S Y + +Y G W+ + GM+ + V S
Sbjct: 250 GDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDV-----VS 304
Query: 599 WADVGDIDGLHGFSSGDNTHP-RSEEIYRMAECLGS 633
W + I G DN P ++ E Y+ E G+
Sbjct: 305 WTTI--ISG-----CVDNLLPDKALETYKTMEITGT 333
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/653 (31%), Positives = 369/653 (56%), Gaps = 14/653 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ +Y + G F A +F ++ + D V++NT++SG + + AL M G+ D
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT S+ L+ C G QLHS + K G+ S+ + +L+ +Y + G + A +F+
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ V WN +L + Q D ++ +M G+R + ++ C + ++L
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLA-KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL 363
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MN 235
G+QIH +S+K G+ + + V VL+ YSK A +V + +++V+SWT+MI+ +
Sbjct: 364 GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQ 423
Query: 236 RE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E DA++ FKEM+ G+ P+++ I + N +++G IH + + + S+
Sbjct: 424 HECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI 483
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ +YAR ++++ F+E+ ++ I+WN L+SG+AQ+GL A++ F + +
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
K N +TF S L+A +A +K G++ H+ +IK G + VG+AL+ +YGK GS ++
Sbjct: 544 KHNVFTFVSALSA--SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDA 601
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ F+E E++E +W II++ ++HG ++ F +M+ +G++P+ +TF+ VL C
Sbjct: 602 KMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHV 661
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G F SM +Y I P PDHY+C++D+ GR G+L+ A++ + ++P V ++
Sbjct: 662 GLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL AC++H N+E+GE A L+++EP S SYVL+SN YA W +RK M+ +GV
Sbjct: 722 LLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGV 781
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
RKE G SW +V ++ +H F GD HP +E+IY + + + K+E+
Sbjct: 782 RKEPGRSWIEVKNV--VHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEK 832
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/549 (28%), Positives = 276/549 (50%), Gaps = 14/549 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K+G A +F L+ D VSW +LSG+ ++ ++AL +M+ GVV
Sbjct: 84 IDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTP 143
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS C E F G +H+ K G SE++VGNA+IT+Y R G A RVF +
Sbjct: 144 YVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCD 203
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP++D+V++N ++SG+ Q G +G A+ EM GL D V+ +S +AC +L+
Sbjct: 204 MPHRDTVTFNTLISGHAQCG-HGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G Q+H K G + + L+ Y KC A +F NV+ W M+
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + LF +M+ G+ PN T+ ++ + + G IH L +KT F S+ V
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
LI MY+++ ++ + +V + L ++++SW ++I+GY Q+ A+ AF + K
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 353 -PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P+ S ++ G A +++ G + H+ I G D + +AL+++Y + G I E+
Sbjct: 443 WPDNIGLASAIS--GCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREA 500
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
F E + K E W ++S A+ G +E + F M+ GV+ + TF+S L+
Sbjct: 501 FSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANL 560
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
I +G+ + ++K H + + ++ + G+ G E+A+ ++ +S +
Sbjct: 561 AEIKQGKQIHARVIKTGH-SFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNT 618
Query: 532 LLGACRIHG 540
++ +C HG
Sbjct: 619 IITSCSQHG 627
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 229/449 (51%), Gaps = 24/449 (5%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
++H+ V GL VGN LI +YS+ G ++ ARRVF+E+ +D+VSW A+LSGY Q+G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
G EA+ +M R G+ +S S+C + G+ IH K G+ + + VG
Sbjct: 123 -LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVG 181
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVC 252
N +++ Y +C A +VF M R+ +++ T+IS + E A+ +F+EM+ G+
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241
Query: 253 PNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ VT L+ A S+G+L K G +H K S+ + L+ +Y + ++ +
Sbjct: 242 PDCVTISSLLAACASLGDLQK-GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAE 369
+F+ ++ WN ++ + Q LA F ++ + +PN +T+ +L
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQIN-DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+I L G++ HS +K G +SD V L+DMY K G + +++RV +EK +WT++
Sbjct: 360 EIDL--GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSM 417
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG-----RNGMIHKGRHLFDSM 484
I+ +H + + FKEM+ G+ PD+I S ++ C R G+ R
Sbjct: 418 IAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGY 477
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
D I ++ +V++ R GR+ EA
Sbjct: 478 SGDVSI------WNALVNLYARCGRIREA 500
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 199/410 (48%), Gaps = 17/410 (4%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASAC-GHEKNL 175
M + + S L+G+ D +L+L + R+ L + F A AC G+ +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPA--KVLSLFADKARQHGGLGPLDFACALRACRGNGRRW 58
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
++ +IH ++ G G + VGN+L+ YSK + A +VF + R+ +SW M+S
Sbjct: 59 QVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118
Query: 236 R-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E+A+ L+++M GV P ++ + + L +GR+IH K F SE
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
V N +IT+Y R S + +E+VF ++ R+ +++N LISG+AQ G A++ F +
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ T S+L A + D L+ G + HS++ K G+ SD I+ +LLD+Y K G +
Sbjct: 239 GLSPDCVTISSLLAACASLGD--LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVE 296
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ +FN + + W ++ A + D F +M+ G+RP+ T+ +L C
Sbjct: 297 TALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCT 356
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELV 517
I G + +K D Y ++DM + G LE+A ++
Sbjct: 357 CTREIDLGEQIHSLSVKTGF---ESDMYVSGVLIDMYSKYGWLEKARRVL 403
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/682 (31%), Positives = 367/682 (53%), Gaps = 52/682 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+N Y K A +F + D+V+W+++++ + ++ A RM + +
Sbjct: 98 INFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNR 157
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ + L C ++ G ++H+++ G++++V V ALITMYS+ G + A VF +
Sbjct: 158 ITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHK 217
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++ VSW AI+ Q EA +M++ G+ + V+F S ++C + L
Sbjct: 218 MTERNVVSWTAIIQANAQHRKLN-EAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNR 276
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G++IH + G T + V N L++ Y KC +A ++F RM R+VISW+ MI+
Sbjct: 277 GRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQ 336
Query: 234 ---MNRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
++E + L + MR +GV PN VTF+ ++ A + +++GR IH K F
Sbjct: 337 SGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFE 396
Query: 288 SEPSVCNCLITMYAR----FESMQ---------------------------DSEKVFDEL 316
+ S+ + MYA+ +E+ Q +EKVF E+
Sbjct: 397 LDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEM 456
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKH 375
R ++SWN +I+GYAQNG + + + E +P+ T ++L A GA L+
Sbjct: 457 PTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALA--GLER 514
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G+ H+ +K+GL+SD +V ++L+ MY K G + E++ VF++ + AW A+++ +
Sbjct: 515 GKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQ 574
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
HGD ++ FK M + V P+ IT +V++ C R G++ +GR +F M +D+ + P
Sbjct: 575 HGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQ 634
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM 555
HY CMVD+LGR GRL+EAEE + +P P +SV +LLGAC+ H NV++ ER A ++++
Sbjct: 635 HYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILEL 694
Query: 556 EPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG-LHGFSSG 614
EP+ + Y+ +SN+YA+ G W+ +R+ M +G++K+ G S +IDG +H F +
Sbjct: 695 EPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSI---EIDGRIHTFVAE 751
Query: 615 DNTHPRSEEIYRMAECLGSEMK 636
D HP + I+ E L EMK
Sbjct: 752 DCAHPEIDAIHAELETLTKEMK 773
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 266/511 (52%), Gaps = 46/511 (9%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
G++ ++ TY + C F G +H + + G++ ++Y+GN+LI YS++ + A
Sbjct: 51 GLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASA 110
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+VF M +D V+W+++++ Y + ++ +A M + + ++F S AC +
Sbjct: 111 EQVFRRMTLRDVVTWSSMIAAYAGN-NHPAKAFDTFERMTDANIEPNRITFLSILKACNN 169
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
LE G++IH + MG T V+V L++ YSKC A +VF +M +RNV+SWT +
Sbjct: 170 YSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAI 229
Query: 232 ISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I N + +A L+++M G+ PN VTF+ L+++ + + GR IH +
Sbjct: 230 IQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGL 289
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS-LAAVQAFF 345
++ V N LITMY + S+Q++ ++FD +S R++ISW+A+I+GYAQ+G ++ F
Sbjct: 290 ETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVF 349
Query: 346 GVIKESK-----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
+++ + PN TF S+L A A +L+ G++ H+ + KVG + D + +A+ +
Sbjct: 350 QLLERMRREGVFPNKVTFMSILRACTAHG--ALEQGRQIHAELSKVGFELDRSLQTAIFN 407
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK-------- 452
MY K GSI+E+++VF++ K+ AWT+ +S + GD S F EM +
Sbjct: 408 MYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLM 467
Query: 453 -----------------------GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
G +PD +T +++L CG + +G+ + +K
Sbjct: 468 IAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVK-LG 526
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+E + ++ M + G++ EA + ++
Sbjct: 527 LESDTVVATSLIGMYSKCGQVAEARTVFDKM 557
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 242/464 (52%), Gaps = 18/464 (3%)
Query: 142 EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLM 201
EAI L + ++GL ++ ++ C + E GK +H ++G + +GN L+
Sbjct: 39 EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDV 256
+ YSK E A +VFRRM R+V++W++MI+ + A F+ M + PN +
Sbjct: 99 NFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRI 158
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
TF+ ++ A + +++++GR IH + ++ +V LITMY++ + + +VF ++
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKM 218
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKH 375
+ R ++SW A+I AQ+ A + + +++ PNA TF S+LN+ E +L
Sbjct: 219 TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPE--ALNR 276
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G+R HSHI + GL++D IV +AL+ MY K S+ E++ +F+ ++ +W+A+I+ A+
Sbjct: 277 GRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQ 336
Query: 436 HG--DYESVMNQFK---EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
G D ES+ F+ M +GV P+ +TF+S+L C +G + +GR + + K
Sbjct: 337 SGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSK-VGF 395
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIAD 550
E + + +M + G + EAE++ ++ + S L G++ E++
Sbjct: 396 ELDRSLQTAIFNMYAKCGSIYEAEQVFSKM-ANKNVVAWTSFLSMYIKCGDLSSAEKV-- 452
Query: 551 ALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
+M S+ LM YA+ GD V L MK++G + +
Sbjct: 453 -FSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPD 495
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/647 (33%), Positives = 356/647 (55%), Gaps = 16/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K + D A +F + ++V W+ V++G+ ++D + L M +G+
Sbjct: 180 VDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQ 239
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY++ C F G QLH +K + +G A + MY++ R+ +A +VF+
Sbjct: 240 STYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNT 299
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+PN S+NAI+ GY + D G++A+ + R L D +S + A +AC K
Sbjct: 300 LPNPPRQSYNAIIVGYARQ-DQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLE 358
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G Q+HG+++K G G ++ V N ++ Y KC +A +F M R+ +SW +I+ + +
Sbjct: 359 GIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQ 418
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +SLF M + P+D T+ ++ A + + G IHG IK+ + V
Sbjct: 419 NEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFV 478
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
+ L+ MY + + ++EK+ L + +SWN++ISG++ S A Q +F + E
Sbjct: 479 GSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENA-QRYFSQMLEMG 537
Query: 353 --PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ YT+ +VL+ I L G++ H+ I+K+ L SD + S L+DMY K G++ +
Sbjct: 538 IIPDNYTYATVLDVCANMATIEL--GKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQD 595
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S+ +F + ++ W+A+I A A HG E +N F+EM+ V+P+ F+SVL C
Sbjct: 596 SRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAH 655
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G + KG H F ML Y ++P +HYSCMVD+LGR G++ EA +L+ +P + +
Sbjct: 656 MGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWR 715
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL C++ GNVE+ E+ ++L++++P S +YVL++N+YA G W VA +R MK+
Sbjct: 716 TLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCK 775
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKY 637
++KE G SW +V D +H F GD HPRSEEIY L EMK+
Sbjct: 776 LKKEPGCSWIEVR--DEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKW 820
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 301/564 (53%), Gaps = 21/564 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y G A +F+++ D+VSWN++LS + + ++ +RM + + D T+
Sbjct: 82 YAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATF 141
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ L C E + GLQ+H L ++ G +++V G+AL+ MYS+ +L +A RVF EMP
Sbjct: 142 AVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPE 201
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
++ V W+A+++GY Q+ D +E + +M++ G+ + ++ S +C +LG Q
Sbjct: 202 RNLVCWSAVIAGYVQN-DRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQ 260
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNRED- 238
+HG ++K + +G + Y+KCE DA KVF + + S+ +I R+D
Sbjct: 261 LHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQ 320
Query: 239 ---AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
A+ +F+ ++ + + ++++ G + A S+ EG +HGL +K V N
Sbjct: 321 GLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANT 380
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
++ MY + ++ ++ +F+E+ R+ +SWNA+I+ + QN + + F +++ + +P+
Sbjct: 381 ILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPD 440
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
+T+GSV+ A + +L +G H IIK G+ D VGSAL+DMYGK G + E++++
Sbjct: 441 DFTYGSVVKACAGQQ--ALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKI 498
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
+EK+ +W +IIS + E+ F +M G+ PD+ T+ +VL VC I
Sbjct: 499 HARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATI 558
Query: 475 HKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
G+ + +LK ++ D Y S +VDM + G ++++ + + P ++ ++
Sbjct: 559 ELGKQIHAQILK---LQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVT-WSAM 614
Query: 533 LGACRIHGNVEMGERIADALMKME 556
+ A HG +GE+ + +M+
Sbjct: 615 ICAYAYHG---LGEKAINLFEEMQ 635
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 241/502 (48%), Gaps = 53/502 (10%)
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+S L C + + G Q+H+ ++ G +YV N L+ Y + ++ A +VFD
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 118 MPNKDSVSWNAILSGYTQDGDYGV------------------------------EAILAL 147
MP +D +SWN ++ GY G+ G ++I
Sbjct: 67 MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
+ M + D+ +F AC ++ LG Q+H ++I+MG+ V G+ L+ YSKC
Sbjct: 127 VRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLI 262
+ DA +VFR M +RN++ W+ +I+ + + + LFK+M G+ + T+ +
Sbjct: 187 KKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
+ + + K G +HG +K++F + + + MYA+ E M D+ KVF+ L
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQ 306
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSV-LNAVGAAEDISLKH--GQRC 379
S+NA+I GYA+ L A+ F + + N F + L+ A + +H G +
Sbjct: 307 SYNAIIVGYARQDQGLKALDIF----QSLQRNNLGFDEISLSGALTACSVIKRHLEGIQL 362
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H +K GL + V + +LDMYGK G++ E+ +F E + + +W AII+A ++ +
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEI 422
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-----DYHIEPSP 494
++ F M + PD T+ SV+ C ++ G + ++K D+ +
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVG--- 479
Query: 495 DHYSCMVDMLGRVGRLEEAEEL 516
S +VDM G+ G L EAE++
Sbjct: 480 ---SALVDMYGKCGMLMEAEKI 498
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 138/315 (43%), Gaps = 37/315 (11%)
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
+TF ++ S + G+ +H I T F+ V NCL+ Y + M + KVFD
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 316 LSCREIISW-------------------------------NALISGYAQNGLSLAAVQAF 344
+ R++ISW N+L+S Y NG++ +++ F
Sbjct: 67 MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 345 FGVIKESKPNAY-TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ P+ Y TF +L A ED L G + H I++G ++D + GSAL+DMY
Sbjct: 127 VRMRSLKIPHDYATFAVILKACSGIEDYGL--GLQVHCLAIQMGFENDVVTGSALVDMYS 184
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K + ++ RVF E E++ W+A+I+ ++ + + FK+M G+ T+ S
Sbjct: 185 KCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244
Query: 464 VLTVCGRNGMIHKGRHLFDSMLK-DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
V C G L LK D+ + + +DM + R+ +A ++ +P
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG--TATLDMYAKCERMFDAWKVFNTLPN 302
Query: 523 GPGLSVLQSLLGACR 537
P S ++G R
Sbjct: 303 PPRQSYNAIIVGYAR 317
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/652 (33%), Positives = 358/652 (54%), Gaps = 27/652 (4%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAV 58
++Y K +F A +F+ + ++ SW ++ G + D F M G++ D
Sbjct: 109 HVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKF 168
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
YS + C+ + G +H+ IV G + ++V +L+ MY++ G + ++ VF+ M
Sbjct: 169 AYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMM 228
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+ VSWNA++SG T +G + +EA + M + + S + A G ++ +G
Sbjct: 229 TEHNQVSWNAMISGCTSNGLH-LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMG 287
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS------WTTMI 232
K++ + ++G +V VG L+ YSKC DA VF D N I+ W MI
Sbjct: 288 KEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMI 343
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF- 286
S + +A+ L+ +M +G+ + T+ + +AI+ ++ GR++HG+ +K
Sbjct: 344 SGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLD 403
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
L SV N + Y++ ++D KVFD + R+I+SW L++ Y+Q+ L A+ A F
Sbjct: 404 LMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL-ATFC 462
Query: 347 VIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+++E PN +TF SVL + A L++G++ H + K GLD++ + SAL+DMY K
Sbjct: 463 LMREEGFAPNQFTFSSVL--ISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAK 520
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GSI E+ +VF++ +WTAIIS A+HG E + F+ ME G++ +++T L V
Sbjct: 521 CGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCV 580
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L C GM+ +G F M Y + P +HY+C++D+LGRVGRL++A E + ++P P
Sbjct: 581 LFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEP 640
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
V Q+LLG CR+HGNVE+GE A ++ + P S +YVL+SN Y E G +E LR
Sbjct: 641 NEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRN 700
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
MK +GV+KE G+SW V +H F SGD HP+ +EIY E L ++K
Sbjct: 701 VMKDQGVKKEPGYSWISVK--GRVHKFYSGDQQHPQKKEIYVKLEELREKIK 750
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 269/534 (50%), Gaps = 31/534 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMN---LIGVV 54
+NMY K G + + +FN + + VSWN ++SG + +A +RM +
Sbjct: 209 LNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNM 268
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ V+ S A+ +D G ++ + + G++ V VG ALI MYS+ G L +AR V
Sbjct: 269 YTLVSVSKAVGKLVDVN---MGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSV 325
Query: 115 FDE--MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
FD + + WNA++SGY+Q G EA+ ++M + G+ D ++ S +A
Sbjct: 326 FDTNFINCGVNTPWNAMISGYSQSG-CSQEALELYVQMCQNGITSDLYTYCSVFNAIAAS 384
Query: 173 KNLELGKQIHGVSIKMGYGTH-VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
K+L+ G+ +HG+ +K G VSV N + YSKC D KVF RM +R+++SWTT+
Sbjct: 385 KSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTL 444
Query: 232 ISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
++ E+A++ F MR +G PN TF ++ + + ++ GR +HGL K
Sbjct: 445 VTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGL 504
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+E + + LI MYA+ S+ ++ KVFD++S +I+SW A+ISGYAQ+GL A+Q F
Sbjct: 505 DTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRR 564
Query: 347 V-IKESKPNAYTFGSVLNAV--GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + K NA T VL A G + L + Q+ G+ + + ++D+ G
Sbjct: 565 MELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMED---GYGVVPEMEHYACIIDLLG 621
Query: 404 KRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD-SITF 461
+ G + ++ + E +E W ++ HG+ E + + + +RP+ S T+
Sbjct: 622 RVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVE--LGEIAARKILSIRPEYSATY 679
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+ + G G L + M KD ++ P + + + GRV + ++
Sbjct: 680 VLLSNTYIETGSYEDGLSLRNVM-KDQGVKKEPGY--SWISVKGRVHKFYSGDQ 730
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 125/249 (50%), Gaps = 6/249 (2%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVC--NCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
++E + +HGL +K+NF + + N +Y++ + + VFDE+ R + SW +I
Sbjct: 80 IREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMI 139
Query: 329 SGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
G ++GL + F ++ P+ + + +++ + + SL+ G+ H+ I+ G
Sbjct: 140 VGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLD--SLELGKMVHAQIVMRG 197
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+ V ++LL+MY K GSI +S VFN E ++ +W A+IS +G + + F
Sbjct: 198 FATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFV 257
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
M+N P+ T +SV G+ ++ G+ + + + IE + + ++DM +
Sbjct: 258 RMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV-QNCASELGIEGNVLVGTALIDMYSKC 316
Query: 508 GRLEEAEEL 516
G L +A +
Sbjct: 317 GSLHDARSV 325
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/653 (31%), Positives = 369/653 (56%), Gaps = 14/653 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ +Y + G F A +F ++ + D V++NT++SG + + AL M G+ D
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT S+ L+ C G QLHS + K G+ S+ + +L+ +Y + G + A +F+
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ V WN +L + Q D ++ +M G+R + ++ C + ++L
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLA-KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL 363
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MN 235
G+QIH +S+K G+ + + V VL+ YSK A +V + +++V+SWT+MI+ +
Sbjct: 364 GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQ 423
Query: 236 RE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E DA++ FKEM+ G+ P+++ I + N +++G IH + + + S+
Sbjct: 424 HECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI 483
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ +YAR ++++ F+E+ ++ I+WN L+SG+AQ+GL A++ F + +
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
K N +TF S L+A +A +K G++ H+ +IK G + VG+AL+ +YGK GS ++
Sbjct: 544 KHNVFTFVSALSA--SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDA 601
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ F+E E++E +W II++ ++HG ++ F +M+ +G++P+ +TF+ VL C
Sbjct: 602 KMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHV 661
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G F SM +Y I P PDHY+C++D+ GR G+L+ A++ + ++P V ++
Sbjct: 662 GLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL AC++H N+E+GE A L+++EP S SYVL+SN YA W +RK M+ +GV
Sbjct: 722 LLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGV 781
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
RKE G SW +V ++ +H F GD HP +E+IY + + + K+E+
Sbjct: 782 RKEPGRSWIEVKNV--VHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEK 832
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 156/549 (28%), Positives = 276/549 (50%), Gaps = 14/549 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K+G A +F L+ D VSW +LSG+ ++ ++AL +M+ GVV
Sbjct: 84 IDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTP 143
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS C E F G +H+ K G SE++VGNA+IT+Y R G A RVF +
Sbjct: 144 YVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCD 203
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP++D+V++N ++SG+ Q G +G A+ EM GL D V+ +S +AC +L+
Sbjct: 204 MPHRDTVTFNTLISGHAQCG-HGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G Q+H K G + + L+ Y KC A +F NV+ W M+
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + LF +M+ G+ PN T+ ++ + + G IH L +KT F S+ V
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
LI MY+++ ++ + +V + L ++++SW ++I+GY Q+ A+ AF + K
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 353 -PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P+ S ++ G A +++ G + H+ I G D + +AL+++Y + G I E+
Sbjct: 443 WPDNIGLASAIS--GCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREA 500
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
F E + K E W ++S A+ G +E + F M+ GV+ + TF+S L+
Sbjct: 501 FSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANL 560
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
I +G+ + ++K H + + ++ + G+ G E+A+ ++ +S +
Sbjct: 561 AEIKQGKQIHARVIKTGH-SFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNT 618
Query: 532 LLGACRIHG 540
++ +C HG
Sbjct: 619 IITSCSQHG 627
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 229/449 (51%), Gaps = 24/449 (5%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
++H+ V GL VGN LI +YS+ G ++ ARRVF+E+ +D+VSW A+LSGY Q+G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
G EA+ +M R G+ +S S+C + G+ IH K G+ + + VG
Sbjct: 123 -LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVG 181
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVC 252
N +++ Y +C A +VF M R+ +++ T+IS + E A+ +F+EM+ G+
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241
Query: 253 PNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ VT L+ A S+G+L K G +H K S+ + L+ +Y + ++ +
Sbjct: 242 PDCVTISSLLAACASLGDLQK-GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAE 369
+F+ ++ WN ++ + Q LA F ++ + +PN +T+ +L
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQIN-DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+I L G++ HS +K G +SD V L+DMY K G + +++RV +EK +WT++
Sbjct: 360 EIDL--GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSM 417
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG-----RNGMIHKGRHLFDSM 484
I+ +H + + FKEM+ G+ PD+I S ++ C R G+ R
Sbjct: 418 IAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGY 477
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
D I ++ +V++ R GR+ EA
Sbjct: 478 SGDVSI------WNALVNLYARCGRIREA 500
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 199/410 (48%), Gaps = 17/410 (4%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASAC-GHEKNL 175
M + + S L+G+ D +L+L + R+ L + F A AC G+ +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPA--KVLSLFADKARQHGGLGPLDFACALRACRGNGRRW 58
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
++ +IH ++ G G + VGN+L+ YSK + A +VF + R+ +SW M+S
Sbjct: 59 QVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118
Query: 236 R-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E+A+ L+++M GV P ++ + + L +GR+IH K F SE
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
V N +IT+Y R S + +E+VF ++ R+ +++N LISG+AQ G A++ F +
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ T S+L A + D L+ G + HS++ K G+ SD I+ +LLD+Y K G +
Sbjct: 239 GLSPDCVTISSLLAACASLGD--LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVE 296
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ +FN + + W ++ A + D F +M+ G+RP+ T+ +L C
Sbjct: 297 TALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCT 356
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELV 517
I G + +K D Y ++DM + G LE+A ++
Sbjct: 357 CTREIDLGEQIHSLSVKTGF---ESDMYVSGVLIDMYSKYGWLEKARRVL 403
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/645 (32%), Positives = 365/645 (56%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++++ K G ++A +F +++ ++T+L G+ K+ + AL+F RM V
Sbjct: 88 VSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVV 147
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ L C D+ G ++H ++ + V+ ++ MY++ ++ +A ++FD
Sbjct: 148 YNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDR 207
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D VSWN I++G++Q+G + +A+ ++ M +G R D ++ + A L +
Sbjct: 208 MPERDLVSWNTIIAGFSQNG-FAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GK IHG +I+ G+ V++ L YSKC A +F M + V+SW +M+
Sbjct: 267 GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E A+++F++M +G+ P VT + +HA + ++ G+ +H + N S+ SV
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI+MY++ + + + +F+ L+ R +SWNA+I GYAQNG A+ F +
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 446
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+++T SV+ A+ AE +H + H II+ LD + V +AL+DMY K G+I +
Sbjct: 447 KPDSFTMVSVIPAL--AELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+++F+ ++ W A+I HG + ++ F +M+ V P+ IT+LSV++ C +
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS 564
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G F SM +DY +EPS DHY MVD+LGR GR++EA + + +P PG++V +
Sbjct: 565 GLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGA 624
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
GAC+IH N+E+GE+ A L ++ P G +VL++N+YA W VA +RK M+ KG+
Sbjct: 625 XXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGL 684
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K G S ++ + +H F SG THP+S+ IY E L E+K
Sbjct: 685 KKTPGCSVVELR--NEVHSFYSGSTTHPQSKRIYAFLEELVYEIK 727
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 249/515 (48%), Gaps = 54/515 (10%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+ L++K GL +E L++++S++G + EA RVF+ + +K ++ +L GY ++
Sbjct: 67 QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS 126
Query: 138 DYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
+E LA + MR ++ +FT CG +L+ GK+IHG I + +V
Sbjct: 127 --SLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFA 184
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMRLDGV 251
+++ Y+KC DA K+F RM +R+++SW T+I S N + A+ L M+ +G
Sbjct: 185 MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQ 244
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ +T + ++ A + L+ G+ IHG I+ F ++ L MY++ S++ +
Sbjct: 245 RPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARL 304
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAED 370
+FD + + ++SWN+++ GY QNG A+ F +++E P T L+A D
Sbjct: 305 IFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGD 364
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
L+ G+ H + ++ L SD V ++L+ MY K + + +FN ++ +W A+I
Sbjct: 365 --LERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMI 422
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG--------------------- 469
A++G +N F EM++ G++PDS T +SV+
Sbjct: 423 LGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLD 482
Query: 470 --------------RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+ G IH R LFD M+ D H+ ++ M+D G G A +
Sbjct: 483 KNIFVTTALVDMYSKCGAIHMARKLFD-MISDRHVIT----WNAMIDGYGTHGLGRAALD 537
Query: 516 LVGQIPGG---PGLSVLQSLLGACRIHGNVEMGER 547
L ++ G P S++ AC G V+ G R
Sbjct: 538 LFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR 572
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 108/212 (50%), Gaps = 5/212 (2%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+KE I L IK +E L+++++++ S+ ++ +VF+ + + ++ ++ G
Sbjct: 62 MKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKG 121
Query: 331 YAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
YA+N SL AF ++ + KP Y F +L G D LK G+ H +I
Sbjct: 122 YAKNS-SLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNAD--LKRGKEIHGQLITNSF 178
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
++ + +++MY K I ++ ++F+ E+ +W II+ +++G + +
Sbjct: 179 AANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLR 238
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
M+++G RPDSIT ++VL G++ G+ +
Sbjct: 239 MQDEGQRPDSITLVTVLPAAADVGLLMVGKSI 270
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 230/648 (35%), Positives = 350/648 (54%), Gaps = 18/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K + + A +F L + V WN ++ G+ +S + + M G D
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ LS C G Q HS+I+K L ++VGNAL+ MY++ G L +AR++F+
Sbjct: 429 FTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEH 488
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++D+VSWN I+ GY QD + EA + M G+ D S AC + L
Sbjct: 489 MCDRDNVSWNTIIGGYVQDENES-EAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQ 547
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+H +S+K G + G+ L+ YSKC + DA KVF M + +V+S +I+
Sbjct: 548 GKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQ 607
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
N E+AV LF+EM GV P+++TF ++ A + G HG IK F SE
Sbjct: 608 NNLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYL 667
Query: 294 N-CLITMYARFESMQDSEKVFDELSC-REIISWNALISGYAQNGLSLAAVQAFFGVIKE- 350
L+ +Y M ++ +F ELS + I+ W ++SG++QNG A++ F+ ++
Sbjct: 668 GISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALK-FYKEMRHD 726
Query: 351 -SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ P+ TF +VL SL+ G+ HS I + D D + + L+DMY K G +
Sbjct: 727 GALPDQATFVTVLRVCSVLS--SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMK 784
Query: 410 ESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S +VF+E + +S +W ++I+ A++G E + F M + PD ITFL VLT C
Sbjct: 785 SSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTAC 844
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G + GR +F+ M+ Y IE DH +CMVD+LGR G L+EA++ + P +
Sbjct: 845 SHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARL 904
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
SLLGACRIHG+ GE A+ L+++EP S +YVL+SN+YA +G WE LRK M+
Sbjct: 905 WSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRD 964
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+GV+K G+SW DVG H F++GD +H +I E L MK
Sbjct: 965 RGVKKVPGYSWIDVG--QRRHIFAAGDQSHSDIGKIEMFLEDLYDLMK 1010
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 241/499 (48%), Gaps = 56/499 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K + A +F+ + +P+ V W + SG+ K+ ++A+ RM G D
Sbjct: 202 VDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDH 261
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + T +I Y G+L +AR +F E
Sbjct: 262 LAFVT-----------------------------------VINTYISLGKLKDARLLFGE 286
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP+ D V+WN ++SG+ + G + AI + M + ++ + S SA G NL+L
Sbjct: 287 MPSPDVVAWNVMISGHGKRG-CEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDL 345
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
G +H +IK+G +++ VG+ L+S YSKCE A KVF + +RN + W MI +
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAH 405
Query: 235 NRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N E + LF +M+ G +D TF L+ ++ + ++ G H + IK V
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFV 465
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF-----GV 347
N L+ MYA+ +++D+ ++F+ + R+ +SWN +I GY Q+ A F G+
Sbjct: 466 GNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGI 525
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ + A T + N G L G++ H +K GLD GS+L+DMY K G
Sbjct: 526 VSDGACLASTLKACTNVHG------LYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGI 579
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I ++++VF+ E S + A+I+ +++ E+V+ F+EM KGV P ITF +++
Sbjct: 580 IEDARKVFSSMPEWSVVSMNALIAGYSQNNLEEAVV-LFQEMLTKGVNPSEITFATIVEA 638
Query: 468 CGRNGMIHKGRHLFDSMLK 486
C + + G ++K
Sbjct: 639 CHKPESLTLGTQFHGQIIK 657
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 236/470 (50%), Gaps = 55/470 (11%)
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
VFD + + AL+ + G +HS + G+DSE +GNA++ +Y++ ++ A +
Sbjct: 64 VFDEMPHRLALALRI-------GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEK 116
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
F+ + KD +WN++LS Y+ G G + + + + + + + +F+ S E
Sbjct: 117 QFNSL-EKDVTAWNSMLSMYSSIGQPG-KVLRSFVSLFENLIFPNKFTFSIVLSTSARET 174
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
N+E G+QIH IKMG + G L+ Y+KC+ GDA +VF + D N + WT + S
Sbjct: 175 NVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFS 234
Query: 234 MN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNFL 287
E+AV +F+ MR +G P+ + F+ +I+ IS+G L
Sbjct: 235 GYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKL----------------- 277
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+D+ +F E+ ++++WN +ISG+ + G + A++ F +
Sbjct: 278 -------------------KDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNM 318
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
K S K T GSVL+A+G ++ L G H+ IK+GL S+ VGS+L+ MY K
Sbjct: 319 RKSSVKSTRSTLGSVLSAIGIVANLDL--GLVVHAEAIKLGLASNIYVGSSLVSMYSKCE 376
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ + +VF +E+++ W A+I A +G+ VM F +M++ G D TF S+L+
Sbjct: 377 KMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
C + + G F S++ + + + +VDM + G LE+A ++
Sbjct: 437 TCAVSHDLEMGSQ-FHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQI 485
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/533 (27%), Positives = 253/533 (47%), Gaps = 55/533 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF----EKSDDALSF-ALRMNLIGVVF 55
+++Y K Q A FN+L D+ +WN++LS + + SF +L NLI
Sbjct: 102 VDLYAKCAQVSYAEKQFNSLEK-DVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLI--FP 158
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T+S LS FG Q+H ++K GL+ Y G AL+ MY++ RL +A+RVF
Sbjct: 159 NKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVF 218
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D + + ++V W + SGY + G EA++ M +G R DH++F + +
Sbjct: 219 DGIVDPNTVCWTCLFSGYVKAG-LPEEAVIVFERMRGEGHRPDHLAFVTVIN-------- 269
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
T++S+G + DA +F M +V++W MIS +
Sbjct: 270 ----------------TYISLGKL-----------KDARLLFGEMPSPDVVAWNVMISGH 302
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A+ F MR V T ++ AI I + G ++H IK S
Sbjct: 303 GKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 362
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + L++MY++ E M+ + KVF+ L R + WNA+I GYA NG S ++ F +K
Sbjct: 363 YVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMD-MKS 421
Query: 351 SKPNA--YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S N +TF S+L+ + D+ + G + HS IIK L + VG+AL+DMY K G++
Sbjct: 422 SGYNIDDFTFTSLLSTCAVSHDLEM--GSQFHSIIIKKKLTKNLFVGNALVDMYAKCGAL 479
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+++++F ++ +W II + + + F M + G+ D S L C
Sbjct: 480 EDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKAC 539
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+++G+ + +K ++ S ++DM + G +E+A ++ +P
Sbjct: 540 TNVHGLYQGKQVHCLSVK-CGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMP 591
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
++L+ G+ HS + +G+DS+ +G+A++D+Y K + +++ FN + EK AW +++
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFN-SLEKDVTAWNSML 132
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
S + G V+ F + + P+ TF VL+ R + GR + SM+K +
Sbjct: 133 SMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIK-MGL 191
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
E + +VDM + RL +A+ + I
Sbjct: 192 ERNSYCGGALVDMYAKCDRLGDAQRVFDGI 221
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/652 (33%), Positives = 358/652 (54%), Gaps = 27/652 (4%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAV 58
++Y K +F A +F+ + ++ SW ++ G + D F M G++ D
Sbjct: 163 HVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKF 222
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
YS + C+ + G +H+ IV G + ++V +L+ MY++ G + ++ VF+ M
Sbjct: 223 AYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMM 282
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+ VSWNA++SG T +G + +EA + M + + S + A G ++ +G
Sbjct: 283 TEHNQVSWNAMISGCTSNGLH-LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMG 341
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS------WTTMI 232
K++ + ++G +V VG L+ YSKC DA VF D N I+ W MI
Sbjct: 342 KEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMI 397
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF- 286
S + +A+ L+ +M +G+ + T+ + +AI+ ++ GR++HG+ +K
Sbjct: 398 SGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLD 457
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
L SV N + Y++ ++D KVFD + R+I+SW L++ Y+Q+ L A+ A F
Sbjct: 458 LMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL-ATFC 516
Query: 347 VIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+++E PN +TF SVL + A L++G++ H + K GLD++ + SAL+DMY K
Sbjct: 517 LMREEGFAPNQFTFSSVL--ISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAK 574
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GSI E+ +VF++ +WTAIIS A+HG E + F+ ME G++ +++T L V
Sbjct: 575 CGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCV 634
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L C GM+ +G F M Y + P +HY+C++D+LGRVGRL++A E + ++P P
Sbjct: 635 LFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEP 694
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
V Q+LLG CR+HGNVE+GE A ++ + P S +YVL+SN Y E G +E LR
Sbjct: 695 NEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRN 754
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
MK +GV+KE G+SW V +H F SGD HP+ +EIY E L ++K
Sbjct: 755 VMKDQGVKKEPGYSWISVK--GRVHKFYSGDQQHPQKKEIYVKLEELREKIK 804
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 269/534 (50%), Gaps = 31/534 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMN---LIGVV 54
+NMY K G + + +FN + + VSWN ++SG + +A +RM +
Sbjct: 263 LNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNM 322
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ V+ S A+ +D G ++ + + G++ V VG ALI MYS+ G L +AR V
Sbjct: 323 YTLVSVSKAVGKLVDVN---MGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSV 379
Query: 115 FDE--MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
FD + + WNA++SGY+Q G EA+ ++M + G+ D ++ S +A
Sbjct: 380 FDTNFINCGVNTPWNAMISGYSQSG-CSQEALELYVQMCQNGITSDLYTYCSVFNAIAAS 438
Query: 173 KNLELGKQIHGVSIKMGYGTH-VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
K+L+ G+ +HG+ +K G VSV N + YSKC D KVF RM +R+++SWTT+
Sbjct: 439 KSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTL 498
Query: 232 ISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
++ E+A++ F MR +G PN TF ++ + + ++ GR +HGL K
Sbjct: 499 VTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGL 558
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+E + + LI MYA+ S+ ++ KVFD++S +I+SW A+ISGYAQ+GL A+Q F
Sbjct: 559 DTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRR 618
Query: 347 V-IKESKPNAYTFGSVLNAV--GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + K NA T VL A G + L + Q+ G+ + + ++D+ G
Sbjct: 619 MELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMED---GYGVVPEMEHYACIIDLLG 675
Query: 404 KRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD-SITF 461
+ G + ++ + E +E W ++ HG+ E + + + +RP+ S T+
Sbjct: 676 RVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVE--LGEIAARKILSIRPEYSATY 733
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+ + G G L + M KD ++ P + + + GRV + ++
Sbjct: 734 VLLSNTYIETGSYEDGLSLRNVM-KDQGVKKEPGY--SWISVKGRVHKFYSGDQ 784
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 125/249 (50%), Gaps = 6/249 (2%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVC--NCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
++E + +HGL +K+NF + + N +Y++ + + VFDE+ R + SW +I
Sbjct: 134 IREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMI 193
Query: 329 SGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
G ++GL + F ++ P+ + + +++ + + SL+ G+ H+ I+ G
Sbjct: 194 VGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLD--SLELGKMVHAQIVMRG 251
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+ V ++LL+MY K GSI +S VFN E ++ +W A+IS +G + + F
Sbjct: 252 FATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFV 311
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
M+N P+ T +SV G+ ++ G+ + + + IE + + ++DM +
Sbjct: 312 RMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV-QNCASELGIEGNVLVGTALIDMYSKC 370
Query: 508 GRLEEAEEL 516
G L +A +
Sbjct: 371 GSLHDARSV 379
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/646 (33%), Positives = 363/646 (56%), Gaps = 18/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G + +F + ++V+W ++L+G+ D ++ RM GV +
Sbjct: 142 VDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNP 201
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ LS G ++H+ VKFG S V+V N+LI MYS+ G + EA+ VF +
Sbjct: 202 FTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQ 261
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSWN +++G + ++ +EA+ + +L ++++ C + K L L
Sbjct: 262 METRDMVSWNTLMAGLLLN-EHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLAL 320
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMI--SM 234
+Q+H +K G+ + +V +M YSKC DA +F M +NV+SWT MI +
Sbjct: 321 ARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCI 380
Query: 235 NRED---AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
D A +LF MR D V PN+ T+ ++ A SI L+ + IH IKTN+ PS
Sbjct: 381 QNADIPLAAALFSRMREDNVKPNEFTYSTVLTA-SIPILLPQ---IHAQIIKTNYQHAPS 436
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
V L+ Y++ + +++ +F + +++++W+A++S Y+Q G A F + ++
Sbjct: 437 VGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQG 496
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN +T S ++A A+ + G++ H+ IK VGSAL+ MY ++GSI
Sbjct: 497 MKPNEFTISSAIDAC-ASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDS 555
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF ++ +W ++IS A+HG + ++ F++ME G+ D TFL+V+ C
Sbjct: 556 ARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTH 615
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G+ FDSM+ D++I P+ +HYSCMVD+ R G+L+E L+ +P G V +
Sbjct: 616 AGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWR 675
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGACR+H NVE+G+ A L+ +EP S +YVL+SN+YA G W+ +RK M SK
Sbjct: 676 TLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKK 735
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V+KE G SW + + +H F + D +HP SE+IY + + + +K
Sbjct: 736 VKKEAGCSWIQIK--NKVHSFIACDKSHPLSEQIYAKLKAMTTRLK 779
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 235/451 (52%), Gaps = 23/451 (5%)
Query: 76 GLQLHSLIVKFGLD-SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
G QLH L VK G D +EV VG AL+ MY + G + + R VF+ MP ++ V+W ++L+GY
Sbjct: 118 GEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYV 177
Query: 135 QDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
Q ++AL MR +G+ + +FTS SA + ++LG+++H S+K G +
Sbjct: 178 Q--GRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRST 235
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRE--DAVSLFKEMRL 248
V V N L++ YSKC + +A VFR+M R+++SW T+++ +N +A+ LF + R
Sbjct: 236 VFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRA 295
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
+ T+ +I + + R +H +K F S+ +V ++ Y++ + D
Sbjct: 296 SMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDD 355
Query: 309 SEKVFDELS-CREIISWNALISGYAQNG-LSLAAVQAFFGVIKES--KPNAYTFGSVLNA 364
+ +F + + ++SW A+I G QN + LAA A F ++E KPN +T+ +VL A
Sbjct: 356 AFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAA--ALFSRMREDNVKPNEFTYSTVLTA 413
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
I + Q H+ IIK P VG+ALL Y K G+ E+ +F K
Sbjct: 414 -----SIPILLPQ-IHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVV 467
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR-NGMIHKGRHLFDS 483
AW+A++S ++ GD + N F +M +G++P+ T S + C I +GR F +
Sbjct: 468 AWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQ-FHA 526
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
+ Y + + S +V M R G ++ A
Sbjct: 527 ISIKYRYQDAICVGSALVTMYARKGSIDSAR 557
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 187/368 (50%), Gaps = 15/368 (4%)
Query: 111 ARRVFDEMPNKDSVSWNA----ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA 166
AR+ D MP++D+ + ++ + Y + G EA+ +++ R G R+ + +
Sbjct: 48 ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCG-RVQGAAVSRVL 106
Query: 167 SACGHEKNLELGKQIHGVSIKMGYG-THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
CG + G+Q+H + +K G+ V VG L+ Y KC D VF M RNV
Sbjct: 107 KVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNV 166
Query: 226 ISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
++WT++++ + D ++LF MR +GV PN TF ++ A++ V GR +H
Sbjct: 167 VTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQ 226
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+K S VCN LI MY++ +++++ VF ++ R+++SWN L++G N L A
Sbjct: 227 SVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEA 286
Query: 341 VQAFF-GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
+Q F +K + T+ +V+ + ++L ++ HS ++K G SD V +A++
Sbjct: 287 LQLFHDSRASMAKLSQSTYSTVIKLCANLKQLAL--ARQLHSCVLKHGFHSDGNVMTAIM 344
Query: 400 DMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
D Y K G + ++ +F ++ +WTA+I ++ D F M V+P+
Sbjct: 345 DAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNE 404
Query: 459 ITFLSVLT 466
T+ +VLT
Sbjct: 405 FTYSTVLT 412
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 376 GQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G++ H +K G D + VG+AL+DMY K G + + + VF +++ WT++++
Sbjct: 118 GEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYV 177
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
+ VM F M +GV P+ TF SVL+ G + GR + +K + +
Sbjct: 178 QGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVK-FGCRSTV 236
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQI 520
+ +++M + G +EEA+ + Q+
Sbjct: 237 FVCNSLINMYSKCGLVEEAKAVFRQM 262
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/671 (31%), Positives = 377/671 (56%), Gaps = 57/671 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLN--NPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVF 55
++MY K A +F +++ ++VSWN +++ + + S +AL RMNL G+
Sbjct: 49 ISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGT 108
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D VT+ + L C G ++H+ + GLDS + NAL+TMY+R+G + +A+R+F
Sbjct: 109 DHVTFVSVLGAC---SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMF 165
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ +D SWNA++ ++Q GD+ L + + M+ ++ + ++ + S + L
Sbjct: 166 QSLQTRDETSWNAVILAHSQSGDWS--GALRIFKEMKCDMKPNSTTYINVISGFSTPEVL 223
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
G++IH + G+ + + V L++ Y KC + +A +VF +M R+++SW MI
Sbjct: 224 PEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCY 283
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A+ L++++ ++G TF+ ++ A S + +GR++H ++ SE
Sbjct: 284 VQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEV 343
Query: 291 SVCNCLITMYARFESMQDSEKVF----------------------------------DEL 316
+V L+ MYA+ S++++ KVF D L
Sbjct: 344 AVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRL 403
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLK 374
R+ I WNA+I+ Y QNG ++AA++ F + + KP+A TF +VL A + +S
Sbjct: 404 GSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLS-- 461
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
+ H+ I + L+S+ +V + L++MY + GS+ E++R+F +EK+ +WTA+++A +
Sbjct: 462 EVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFS 521
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
++G Y ++ F+EM+ +GV+PD +T+ S+L VC G + +G F M + + + P+
Sbjct: 522 QYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTA 581
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
DH++ MVD+LGR GRL +A+EL+ +P P + L ACRIHG +E+GE A+ + +
Sbjct: 582 DHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYE 641
Query: 555 MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG-LHGFSS 613
++P+ + Y+ MSN+YA G WE VA +RK M+ +G++K G S+ +V DG LH FSS
Sbjct: 642 LDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEV---DGKLHEFSS 698
Query: 614 GDNTHPRSEEI 624
G HPR++EI
Sbjct: 699 GGKYHPRTDEI 709
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 178/613 (29%), Positives = 300/613 (48%), Gaps = 44/613 (7%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D VT+ T L C G LH I + + VGNALI+MY + LV+AR VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 116 DEMP--NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
+ M ++ VSWNA+++ Y Q+G + EA++ M +GL DHV+F S AC
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNG-HSTEALVLYWRMNLQGLGTDHVTFVSVLGACS--- 121
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+L G++IH G + S+ N L++ Y++ GDA ++F+ + R+ SW +I
Sbjct: 122 SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 234 MNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ + A+ +FKEM+ D + PN T+I +I S ++ EGR IH + F S
Sbjct: 182 AHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDS 240
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ V LI MY + S ++ +VFD++ R+++SWN +I Y QNG A++ + +
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLD 300
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
E K TF S+L A + + +L G+ HSHI++ GLDS+ V +AL++MY K GS
Sbjct: 301 MEGFKRTKATFVSILGACSSVK--ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS 358
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ E+++VFN + + AW+ +I A A +G + K + G R D+I + +++T
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSR-DTICWNAMITT 417
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG---P 524
+NG +F M ++P + +++ +GRL E + L QI
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELES 477
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ V +L+ G++E ER+ A + S+ M +++ G + L +
Sbjct: 478 NVVVTNTLINMYARCGSLEEAERLFAAAKEKTVV---SWTAMVAAFSQYGRYAEALDLFQ 534
Query: 585 GMKSKGVRK-EVGFS---------------WADVGDIDGLHGFSSGDNTHPRSEEIYRMA 628
M +GV+ +V ++ W D+ LHG + P ++ M
Sbjct: 535 EMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLA------PTADHFAAMV 588
Query: 629 ECLGSEMKYLNSK 641
+ LG + ++K
Sbjct: 589 DLLGRSGRLFDAK 601
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 152/271 (56%), Gaps = 10/271 (3%)
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P++VTF+ ++ + S V EGR +H + F + V N LI+MY + +S+ D+ V
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 313 FDELSCRE--IISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAE 369
F+ + R+ ++SWNA+I+ YAQNG S A+ ++ + ++ + TF SVL A
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS--- 121
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL G+ H+ + GLDS + +AL+ MY + GS+ +++R+F Q + E +W A+
Sbjct: 122 --SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I A ++ GD+ + FKEM+ ++P+S T+++V++ ++ +GR + ++ +
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN-G 237
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ + +++M G+ G EA E+ ++
Sbjct: 238 FDSDLVVATALINMYGKCGSSHEAREVFDKM 268
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/645 (33%), Positives = 363/645 (56%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ +Y ++G + A +F+ + N D V WN +L+GF K + A+ M ++
Sbjct: 14 IKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNS 73
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+++ LS C FG QLH L++ G + V NAL+ MYS++G+L +A ++F+
Sbjct: 74 ITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNT 133
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP+ + V+WN +++G+ Q+G + EA L EM+ G+ D ++F S + +L+
Sbjct: 134 MPDTNVVTWNGMIAGFVQNG-FMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQ 192
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
GK+IHG ++ G V + + L+ Y KC G A K+F++ + +++ T +IS +
Sbjct: 193 GKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVL 252
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N DA+ +F+ + + + PN VT ++ A + + G+ +H +K V
Sbjct: 253 NGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHV 312
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
+ ++ MYA+ + + ++F + ++ + WNA+I+ +QNG A+ F + +E
Sbjct: 313 GSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGL 372
Query: 353 PNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+Y S+ A+ A ++ +L HG+ HS +IK DS+ SAL+DMYGK G++ +
Sbjct: 373 --SYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVA 430
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VF+ +EK+E +W +II+A HG E + F +M G++PD +TFL++L+ CG
Sbjct: 431 RCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHA 490
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + KG F M ++Y I +HY+C+VD+ GR GRL EA E + +P P V +
Sbjct: 491 GQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGT 550
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGACR+HGNVE+ E + L+ ++P SG YVL+SN++A+ G W V +R MK +GV
Sbjct: 551 LLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGV 610
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K G+SW +V H F + D +HP S +IY + L E++
Sbjct: 611 QKVPGYSWIEVNKTT--HMFVAADGSHPESAQIYSVLNNLLLELR 653
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 249/464 (53%), Gaps = 11/464 (2%)
Query: 87 GLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILA 146
G + + +VG++LI +Y+ G + +ARR+FD+MPNKD V WN +L+G+ + G+ A+
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPN-SAVKV 60
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
+M + + ++F S S C E E G Q+HG+ I G+ V N L++ YSK
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMIS---MN--REDAVSLFKEMRLDGVCPNDVTFIGL 261
DA K+F M D NV++W MI+ N ++A LF EM GV P+ +TF
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
+ +++ +K+G+ IHG ++ + + + LI +Y + + + K+F + + +I
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
+ A+ISGY NGL+ A++ F +++E PNA T SVL A ++L G+ H
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNL--GKELH 298
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
++I+K GLD VGSA++DMY K G + + ++F EK W AII+ +++G +
Sbjct: 299 ANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQ 358
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCM 500
++ F++M +G+ D ++ + L+ C +H G+ + M+K + S +
Sbjct: 359 EAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKG-AFDSEVFAESAL 417
Query: 501 VDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+DM G+ G L A + + +S S++ A HG++E+
Sbjct: 418 IDMYGKCGNLSVARCVFDMMREKNEVS-WNSIIAAYGSHGHLEV 460
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 176/340 (51%), Gaps = 9/340 (2%)
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSL 242
MG+ VG+ L+ Y++ DA ++F +M +++ + W M++ AV +
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
F++MR PN +TF ++ + L + G +HGL I F +P V N L+ MY++
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSV 361
F + D+ K+F+ + +++WN +I+G+ QNG A F +I P++ TF S
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L +V E SLK G+ H +I++ G+ D + SAL+D+Y K + + ++F ++
Sbjct: 181 LPSV--TESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNV 238
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
TAIIS +G + F+ + + + P+++T SVL C ++ G+ L
Sbjct: 239 DIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELH 298
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
++LK + ++ S ++DM + GRL+ A ++ ++P
Sbjct: 299 ANILK-HGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP 337
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/651 (33%), Positives = 366/651 (56%), Gaps = 20/651 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNL-IGVVFD 56
+ MY K G + A+ +F + D+VSWNT++SGF+KS D +L F M G+ +
Sbjct: 151 LTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPN 210
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
V +++ C + G ++H ++VK GLD E Y+ ++LI MY + G + A +F+
Sbjct: 211 RVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFN 270
Query: 117 EMPNKDSVS-----WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+ +KDSV WN ++SGY +G + +A+L I+MM G++ D+ + S S C
Sbjct: 271 SILDKDSVRRNAVIWNVMISGYVSNGCFS-QALLLFIKMMVWGIKPDYSTMVSLFSLCSE 329
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
++ GKQIHG+ K G ++ V L+ Y KC G K+FRR + N+I W+ +
Sbjct: 330 SLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAV 389
Query: 232 ISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS + A+ LF E +++ + + ++ A S L EG IHGL K F
Sbjct: 390 ISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGF 449
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+S+ V + L+ +YA+ M S+KVF LS ++++SWNALISGYAQ+ + A++AF
Sbjct: 450 VSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRD 509
Query: 347 V-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ ++E +PN T +L+ ++L + H ++I+ GL S +V ++L+ Y K
Sbjct: 510 MQLEEIRPNTVTIACILSVCAHLSVMTL--CKEVHGYLIRQGLGSTVLVSNSLIATYAKC 567
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G I S F + E+++ +W +II + H + ++ F +M G++PD +TF ++L
Sbjct: 568 GDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAIL 627
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G + +G F SM++D++++P + Y+CMVD+LGR G L +A +L+ +P P
Sbjct: 628 SACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPD 687
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ SLLG+C+ HG+ + E +A+ + K+ P+ G VL++NLY G + +R
Sbjct: 688 DRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSE 747
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K G++K+ G SW +V + H F +GD +H +S+EIY E L +E+K
Sbjct: 748 IKDMGLKKKPGCSWIEVD--NNFHIFIAGDRSHSQSDEIYAAVESLTTEIK 796
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 219/447 (48%), Gaps = 22/447 (4%)
Query: 39 DDALSFALRMNLIGVVFDAVTYSTAL-----SFCLDHEGFLFGLQLHSLIVKFGLDSEVY 93
DDA+ L+M GV + Y L C ++G Q+H ++K G+ +V
Sbjct: 90 DDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKG----RQIHGHVLKLGVLDDVS 145
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
V N+L+TMY + G + +A ++F++MP D VSWN ++SG+ + DY + +
Sbjct: 146 VVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEF 205
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G+ + V+ S+ +C ++L G++IHGV +K G + + L+ Y KC +A
Sbjct: 206 GIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNA 265
Query: 214 NKVFRRMHD-----RNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIH 263
+F + D RN + W MIS + A+ LF +M + G+ P+ T + L
Sbjct: 266 ENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFS 325
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
S + G+ IHGL K + V L+ MY + M K+F +I
Sbjct: 326 LCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIM 385
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLK-HGQRCHSH 382
W+A+IS AQ+G A++ F+ E G ++ + A ++LK G + H
Sbjct: 386 WSAVISNCAQSGCPTKALELFYEFKMED--GLADSGILVAVLRACSSLTLKPEGMQIHGL 443
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
K+G SD VGSAL+D+Y K + S++VF +K +W A+IS A+ +
Sbjct: 444 ATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEA 503
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCG 469
+ F++M+ + +RP+++T +L+VC
Sbjct: 504 LKAFRDMQLEEIRPNTVTIACILSVCA 530
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/630 (34%), Positives = 349/630 (55%), Gaps = 16/630 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F + + VSWN +L+G+ + D L +M F T ST L C +
Sbjct: 7 LFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGS 66
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G LH+L ++ G + + ++G +L+ MYS+ G + +A +VF ++ N D V+W+A+++G
Sbjct: 67 LREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITG 126
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Q G +G EA M RKG R + + +S S + +L G+ IHG K G+ +
Sbjct: 127 LDQQG-HGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFES 185
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFKEMR 247
V N L+ Y K D NKVF M + +++SW ++S + +F +M
Sbjct: 186 DNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQML 245
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
L+G PN TFI ++ + S + G+ +H IK + + V L+ MYA+ ++
Sbjct: 246 LEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLE 305
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVG 366
D+ FD L R+I SW +ISGYAQ + AV+ F + +E KPN YT S L+ G
Sbjct: 306 DAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS--G 363
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
+ +L++G++ H+ +K G D VGSAL+D+YGK G + ++ +F + +W
Sbjct: 364 CSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSW 423
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
IIS ++HG E + F+ M ++G+ PD TF+ VL+ C G++ +G+ FDSM K
Sbjct: 424 NTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSK 483
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
Y I PS +HY+CMVD+LGR G+ E + + ++ P + +++LGAC++HGNV+ GE
Sbjct: 484 IYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGE 543
Query: 547 RIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDID 606
+ A L +MEP SY+L+SN++A KG W+ V +R M S+G++KE G SW +V D
Sbjct: 544 KAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEV---D 600
Query: 607 G-LHGFSSGDNTHPRSEEIYRMAECLGSEM 635
G +H F S D +HP+ EIY + LG +
Sbjct: 601 GQVHVFLSQDGSHPKIREIYAKLDKLGQSL 630
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 154/521 (29%), Positives = 252/521 (48%), Gaps = 52/521 (9%)
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A R+F MP K+ VSWNA+L+GY Q GD G + + +M + + ++ C
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGD-GKKVLKLFCKMKECETKFSKFTLSTVLKGCA 62
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ +L GK +H ++++ G +G L+ YSKC DA KVF ++ + +V++W+
Sbjct: 63 NTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA 122
Query: 231 MIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIH-AISIGNLVKEGRMIHGLCIKT 284
MI+ + ++A LF MR G PN T L+ A ++G+L + G+ IHG K
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDL-RYGQSIHGCICKY 181
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
F S+ V N LI MY + ++D KVF+ ++ +++SWNAL+SG+ + + F
Sbjct: 182 GFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIF 241
Query: 345 FGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ ++ E KPN +TF SVL + + D G++ H+HIIK D D VG+AL+DMY
Sbjct: 242 YQMLLEGFKPNMFTFISVLRSCSSLLDPEF--GKQVHAHIIKNSSDDDDFVGTALVDMYA 299
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K + ++ F+ + F+WT IIS A+ E + F++M+ +G++P+ T S
Sbjct: 300 KARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLAS 359
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELV---- 517
L+ C + GR L +K H D + S +VD+ G+ G +E AE +
Sbjct: 360 CLSGCSHMATLENGRQLHAVAVKAGHF---GDIFVGSALVDLYGKCGCMEHAEAIFKGLI 416
Query: 518 ------------GQIPGGPGLSVLQS------------------LLGACRIHGNVEMGER 547
G G G L++ +L AC G VE G++
Sbjct: 417 SRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKK 476
Query: 548 IADALMKMEPAGSG--SYVLMSNLYAEKGDWEMVAILRKGM 586
D++ K+ Y M ++ G + V I + M
Sbjct: 477 RFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEM 517
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 231/468 (49%), Gaps = 25/468 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G AL +F + NPD+V+W+ +++G ++ +A M G +
Sbjct: 93 VDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQ 152
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ +S + +G +H I K+G +S+ V N LI MY + + + +VF+
Sbjct: 153 FTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEA 212
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M N D VSWNA+LSG+ G +M+ +G + + +F S +C + E
Sbjct: 213 MTNPDLVSWNALLSGFYDSQTCG-RGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEF 271
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GKQ+H IK VG L+ Y+K DA F R+ +R++ SWT +IS
Sbjct: 272 GKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQ 331
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E AV F++M+ +G+ PN+ T + S ++ GR +H + +K + V
Sbjct: 332 TDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFV 391
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ L+ +Y + M+ +E +F L R+I+SWN +ISGY+Q+G A++AF ++ E
Sbjct: 392 GSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGI 451
Query: 352 KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGS 407
P+ TF VL+A +G E+ G++ + K+ G++ + ++D+ G+ G
Sbjct: 452 MPDEATFIGVLSACSFMGLVEE-----GKKRFDSMSKIYGINPSIEHYACMVDILGRAGK 506
Query: 408 IFESQRVFNETQEKSEFA--WTAIISALARHGDY---ESVMNQFKEME 450
F ++F E + ++ W ++ A HG+ E + EME
Sbjct: 507 -FNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEME 553
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 100/182 (54%), Gaps = 3/182 (1%)
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNA 364
M+ +E++F + + +SWNAL++GYAQ G ++ F + + E+K + +T +VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLK- 59
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
G A SL+ G+ H+ ++ G + D +G +L+DMY K G+++++ +VF + +
Sbjct: 60 -GCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVV 118
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
AW+A+I+ L + G + F M KG RP+ T S+++ G + G+ + +
Sbjct: 119 AWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCI 178
Query: 485 LK 486
K
Sbjct: 179 CK 180
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/646 (33%), Positives = 361/646 (55%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY K G A F+ + ++VSW ++SG+ ++ +DA+ ++M G D
Sbjct: 199 LNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDP 258
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ + + C G QLH ++K G D + NALI+MY+R+G++V A VF
Sbjct: 259 LTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTM 318
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLE 176
+ KD +SW ++++G+TQ G Y +EA+ +M R+G + + F S SAC E
Sbjct: 319 ISTKDLISWASMITGFTQLG-YEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPE 377
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
G+QIHG+ K G G +V G L Y+K A + F ++ +++SW +I
Sbjct: 378 FGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFS 437
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
S + +A+ F +M G+ P+ +TF+ L+ A + +G IH IK E +
Sbjct: 438 DSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAA 497
Query: 292 VCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAF-FGVIK 349
VCN L+TMY + ++ D+ VF ++S ++SWNA++S Q+ + + F +
Sbjct: 498 VCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFS 557
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
E+KP+ T ++L AE SL+ G + H +K GL D V + L+DMY K GS+
Sbjct: 558 ENKPDNITITTILGT--CAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLK 615
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ VF TQ +W+++I A+ G +N F+ M+N GV+P+ +T+L VL+ C
Sbjct: 616 HARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACS 675
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G H +++M + I P+ +H SCMVD+L R G L EAE + ++ P +++
Sbjct: 676 HIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMW 735
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LL +C+ HGNV++ ER A+ ++K++P+ S + VL+SN++A G+W+ VA LR MK
Sbjct: 736 KTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQM 795
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
GV+K G SW V D +H F S DN+H + +IY M E L +M
Sbjct: 796 GVQKVPGQSWIAVK--DQIHVFFSEDNSHQQRGDIYTMLEDLWLQM 839
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 250/483 (51%), Gaps = 30/483 (6%)
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
+ ++ TY + C +G ++H I+K ++ + N ++ MY + G L +AR
Sbjct: 153 IQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDAR 212
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+ FD M ++ VSW ++SGY+Q+G +AI+ I+M++ G D ++F S AC
Sbjct: 213 KAFDTMQLRNVVSWTIMISGYSQNGQEN-DAIIMYIQMLQSGYFPDPLTFGSIIKACCIA 271
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+++LG+Q+HG IK GY H+ N L+S Y++ A+ VF + +++ISW +MI
Sbjct: 272 GDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMI 331
Query: 233 SMNRE-----DAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIK--- 283
+ + +A+ LF++M G PN+ F + A + GR IHG+C K
Sbjct: 332 TGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGL 391
Query: 284 -TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
N + S+C+ MYA+F + + + F ++ +++SWNA+I+ ++ +G A+
Sbjct: 392 GRNVFAGCSLCD----MYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIY 447
Query: 343 AFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F ++ P+ TF S+L A G+ +++ G + HS+IIK+GLD + V ++LL M
Sbjct: 448 FFCQMMHTGLMPDGITFLSLLCACGSP--VTINQGTQIHSYIIKIGLDKEAAVCNSLLTM 505
Query: 402 YGKRGSIFESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
Y K ++ ++ VF + E + +W AI+SA +H V FK M +PD+IT
Sbjct: 506 YTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNIT 565
Query: 461 FLSVLTVCGRNGMIHKGR--HLF---DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
++L C + G H F ++ D + + ++DM + G L+ A +
Sbjct: 566 ITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVS------NRLIDMYAKCGSLKHARD 619
Query: 516 LVG 518
+ G
Sbjct: 620 VFG 622
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 91/167 (54%), Gaps = 9/167 (5%)
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
T+G+++ A + SLK+G++ H HI+K D ++ + +L+MYGK GS+ ++++ F+
Sbjct: 159 TYGNLILACTSIR--SLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFD 216
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
Q ++ +WT +IS +++G + + +M G PD +TF S++ C G I
Sbjct: 217 TMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDL 276
Query: 477 GRHLFDSMLK---DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
GR L ++K D+H+ + ++ M R G++ A ++ I
Sbjct: 277 GRQLHGHVIKSGYDHHLIAQ----NALISMYTRFGQIVHASDVFTMI 319
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/645 (34%), Positives = 357/645 (55%), Gaps = 16/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M+ + G +A +F + D+ SWN ++ G+ K+ D+AL+ RM +G+ D
Sbjct: 136 LSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDV 195
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L C G ++H ++++G +S+V V NALITMY + G + AR VFD
Sbjct: 196 YTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDR 255
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLE 176
MP +D +SWNA++SGY ++ D +E L L MMR+ + D ++ TS SAC +
Sbjct: 256 MPRRDRISWNAMISGYFEN-DVCLEG-LRLFFMMREFFVDPDLMTMTSVISACEALGDER 313
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
LG+++HG IK G+ VSV N L+ +S +A VF +M ++++SWT MIS
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E AV + M +GV P+++T ++ A + L+ +G M+H +T S
Sbjct: 374 KNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI 433
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI MY++ + + +VF + + +ISW ++I G N S A+ F +I
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSL 493
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN+ T SVL+A A +L G+ H+H ++ GL D + +ALLDMY + G + +
Sbjct: 494 KPNSVTLVSVLSA--CARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
FN EK +W +++ A+ G + F +M V PD ITF S+L C R+
Sbjct: 552 WNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRS 610
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
GM+ G F+SM +HI P+ HY+ +VD+LGR GRLE+A E + ++P P ++ +
Sbjct: 611 GMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGA 670
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACRI+ NVE+GE A + +M+ G Y+L+ NLYA+ G W+ VA +RK M+ +
Sbjct: 671 LLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRL 730
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ G SW +V +H F +GD+ HP+ +EI + E +M+
Sbjct: 731 TVDPGCSWVEVA--GQVHAFLTGDDFHPQIKEINAVLEGFYEKME 773
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 248/509 (48%), Gaps = 33/509 (6%)
Query: 21 NNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
NP+ + L G + AL M + V + TY L C G ++H
Sbjct: 60 QNPNSLILELCLKG--DLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVH 117
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
S + K V +GNAL++M+ R+G LVEA VF +M +D SWN ++ GY + G Y
Sbjct: 118 SYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAG-YF 176
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EA+ M+ G+R D +F CG +L G+++H I+ G+ + V V N L
Sbjct: 177 DEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNAL 236
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFKEMRLDGVCPND 255
++ Y KC A VF RM R+ ISW MIS E+ V LF MR V P+
Sbjct: 237 ITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDL 296
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
+T +I A + GR +HG IKT F++E SV N LI M++ ++E VF +
Sbjct: 297 MTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSK 356
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLK 374
+ ++++SW A+ISGY +NGL AV+ + + E P+ T SVL+A L
Sbjct: 357 MEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLG--LLD 414
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G H + GL S IV ++L+DMY K I ++ VF+ K+ +WT+II L
Sbjct: 415 KGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLR 474
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL----------FDSM 484
+ + F++M ++P+S+T +SVL+ C R G + G+ + FD
Sbjct: 475 LNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGF 533
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
L + ++DM R GR+E A
Sbjct: 534 LPN-----------ALLDMYVRCGRMEPA 551
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G R HS++ K +G+ALL M+ + G + E+ VF + E+ F+W ++ A+
Sbjct: 113 GSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAK 172
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
G ++ +N + M G+RPD TF VL CG + +GR + +++ Y E D
Sbjct: 173 AGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIR-YGFESDVD 231
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIP 521
+ ++ M + G + A + ++P
Sbjct: 232 VVNALITMYVKCGDIFSARLVFDRMP 257
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/636 (34%), Positives = 362/636 (56%), Gaps = 17/636 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY KSG D A +F+ + DI SW ++ G + +A S L+M G + +
Sbjct: 362 VHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNL 421
Query: 58 VTYSTAL--SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
TY + L S + +H + G S++ +GNALI MY++ G + +AR VF
Sbjct: 422 TTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVF 481
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D M ++D +SWNA++ G Q+G G EA ++M ++GL D ++ S + G L
Sbjct: 482 DGMCDRDVISWNAMMGGLAQNG-CGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDAL 540
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
E ++H +++ G + VG+ + Y +C DA +F ++ R+V +W MI
Sbjct: 541 EWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGA 600
Query: 233 SMNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ R +A+SLF +M+ +G P+ TFI ++ A ++ + +H L +
Sbjct: 601 AQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAG-LVDL 659
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N L+ Y++ +++ +++VFD++ R + +W +I G AQ+G A F +++E
Sbjct: 660 RVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLRE 719
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+A T+ S+L+A A +L+ + H+H + GL SD VG+AL+ MY K GSI
Sbjct: 720 GIVPDATTYVSILSA--CASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSID 777
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++ VF++ E+ F+WT +I LA+HG ++ F +M+++G +P+ ++++VLT C
Sbjct: 778 DARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACS 837
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +GR F SM +DY IEP+ +HY+CMVD+LGR G LEEAE + +P P +
Sbjct: 838 HAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPW 897
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+LLGAC +GN+EM E A +K++P + +YVL+SN+YA G WE ++R M+ K
Sbjct: 898 GALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRK 957
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
G+RKE G SW +V + +H F GD +HP S+EIY
Sbjct: 958 GIRKEPGRSWIEVD--NRIHSFVVGDTSHPESKEIY 991
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 149/485 (30%), Positives = 260/485 (53%), Gaps = 15/485 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
+NMY K G + A IF+ + +++SW ++ G + + +A L+M G + ++
Sbjct: 261 VNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNS 320
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY + L+ + ++HS V GL ++ VGNAL+ MY++ G + +AR VFD
Sbjct: 321 YTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDG 380
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA--ASACGHEKNL 175
M +D SW ++ G Q G G EA ++M R G + ++ S ASA L
Sbjct: 381 MTERDIFSWTVMIGGLAQHGR-GQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSAL 439
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM---I 232
E K +H + + G+ + + +GN L+ Y+KC DA VF M DR+VISW M +
Sbjct: 440 EWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGL 499
Query: 233 SMN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ N +A ++F +M+ +G+ P+ T++ L++ + ++ +H ++T +S+
Sbjct: 500 AQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDF 559
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + I MY R S+ D+ +FD+LS R + +WNA+I G AQ A+ F + +E
Sbjct: 560 RVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQRE 619
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+A TF ++L+A ++ +L+ + HSH GL D VG+AL+ Y K G++
Sbjct: 620 GFIPDATTFINILSA--NVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVK 676
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++VF++ E++ WT +I LA+HG + F +M +G+ PD+ T++S+L+ C
Sbjct: 677 YAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACA 736
Query: 470 RNGMI 474
G +
Sbjct: 737 STGAL 741
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 252/482 (52%), Gaps = 22/482 (4%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
G+ D+ +Y L CL E L Q+H I+K G++ +YV N L+ +Y R GRL A
Sbjct: 113 GIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCA 172
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
R+VFD++ K+ W ++ GY + G + +A+ +M ++ + + +++ S AC
Sbjct: 173 RQVFDKLLKKNIYIWTTMIGGYAEYG-HAEDAMRVYDKMRQECGQPNEITYLSILKACCC 231
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
NL+ GK+IH I+ G+ + V V L++ Y KC DA +F +M +RNVISWT M
Sbjct: 232 PVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVM 291
Query: 232 IS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I ++A LF +M+ +G PN T++ +++A + ++ + +H +
Sbjct: 292 IGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGL 351
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ V N L+ MYA+ S+ D+ VFD ++ R+I SW +I G AQ+G A F
Sbjct: 352 ALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQ 411
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ + PN T+ S+LNA A +L+ + H H + G SD +G+AL+ MY K
Sbjct: 412 MQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKC 471
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GSI +++ VF+ ++ +W A++ LA++G F +M+ +G+ PDS T+LS+L
Sbjct: 472 GSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLL 531
Query: 466 TVCGRNGM------IHKGRHLFDS-MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
G +HK H ++ ++ D+ + S + M R G +++A L
Sbjct: 532 NTHGSTDALEWVNEVHK--HAVETGLISDFRVG------SAFIHMYIRCGSIDDARLLFD 583
Query: 519 QI 520
++
Sbjct: 584 KL 585
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 185/330 (56%), Gaps = 8/330 (2%)
Query: 142 EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLM 201
+A+ L +++G+ +D S+ + C ++++ L KQ+H IK G ++ V N L+
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLL 160
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDV 256
Y +C A +VF ++ +N+ WTTMI + EDA+ ++ +MR + PN++
Sbjct: 161 RVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEI 220
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T++ ++ A +K G+ IH I++ F S+ V L+ MY + S++D++ +FD++
Sbjct: 221 TYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKM 280
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKH 375
R +ISW +I G A G A F + +E PN+YT+ S+LNA +A +L+
Sbjct: 281 VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAG--ALEW 338
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
+ HSH + GL D VG+AL+ MY K GSI +++ VF+ E+ F+WT +I LA+
Sbjct: 339 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQ 398
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVL 465
HG + + F +M+ G P+ T+LS+L
Sbjct: 399 HGRGQEAFSLFLQMQRNGCLPNLTTYLSIL 428
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 184/398 (46%), Gaps = 51/398 (12%)
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
+DAV++ K G+ + +++ ++ + + +H IK+ V N L
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNA 355
+ +Y R +Q + +VFD+L + I W +I GYA+ G + A++ + + +E +PN
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
T+ S+L A ++LK G++ H+HII+ G SD V +AL++MY K GSI ++Q +F
Sbjct: 220 ITYLSILKACCCP--VNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIF 277
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT--------- 466
++ E++ +WT +I LA +G + + F +M+ +G P+S T++S+L
Sbjct: 278 DKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337
Query: 467 --------------------------VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCM 500
+ ++G I R +FD M E ++ M
Sbjct: 338 WVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGM-----TERDIFSWTVM 392
Query: 501 VDMLGRVGRLEEAEELVGQIPGG---PGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
+ L + GR +EA L Q+ P L+ S+L A I + E + E
Sbjct: 393 IGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSAL-EWVKVVHKHAEE 451
Query: 558 AGSGSYVLMSN----LYAEKGDWEMVAILRKGMKSKGV 591
AG S + + N +YA+ G + ++ GM + V
Sbjct: 452 AGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDV 489
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/645 (34%), Positives = 357/645 (55%), Gaps = 16/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M+ + G +A +F + D+ SWN ++ G+ K+ D+AL+ RM +G+ D
Sbjct: 136 LSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDV 195
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L C G ++H ++++G +S+V V NALITMY + G + AR VFD
Sbjct: 196 YTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDR 255
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLE 176
MP +D +SWNA++SGY ++ D +E L L MMR+ + D ++ TS SAC +
Sbjct: 256 MPRRDRISWNAMISGYFEN-DVCLEG-LRLFFMMREFFVDPDLMTMTSVISACEALGDER 313
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
LG+++HG IK G+ VSV N L+ +S +A VF +M ++++SWT MIS
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E AV + M +GV P+++T ++ A + L+ +G M+H +T S
Sbjct: 374 KNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI 433
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI MY++ + + +VF + + +ISW ++I G N S A+ F +I
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSL 493
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN+ T SVL+A A +L G+ H+H ++ GL D + +ALLDMY + G + +
Sbjct: 494 KPNSVTLVSVLSA--CARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
FN EK +W +++ A+ G + F +M V PD ITF S+L C R+
Sbjct: 552 WNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRS 610
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
GM+ G F+SM +HI P+ HY+ +VD+LGR GRLE+A E + ++P P ++ +
Sbjct: 611 GMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGA 670
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACRI+ NVE+GE A + +M+ G Y+L+ NLYA+ G W+ VA +RK M+ +
Sbjct: 671 LLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRL 730
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ G SW +V +H F +GD+ HP+ +EI + E +M+
Sbjct: 731 TVDPGCSWVEVA--GQVHAFLTGDDFHPQIKEINAVLEGFYEKME 773
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 248/509 (48%), Gaps = 33/509 (6%)
Query: 21 NNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
NP+ + L G + AL M + V + TY L C G ++H
Sbjct: 60 QNPNSLILELCLKG--DLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVH 117
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
S + K V +GNAL++M+ R+G LVEA VF +M +D SWN ++ GY + G Y
Sbjct: 118 SYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAG-YF 176
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EA+ M+ G+R D +F CG +L G+++H I+ G+ + V V N L
Sbjct: 177 DEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNAL 236
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFKEMRLDGVCPND 255
++ Y KC A VF RM R+ ISW MIS E+ V LF MR V P+
Sbjct: 237 ITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDL 296
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
+T +I A + GR +HG IKT F++E SV N LI M++ ++E VF +
Sbjct: 297 MTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSK 356
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLK 374
+ ++++SW A+ISGY +NGL AV+ + + E P+ T SVL+A L
Sbjct: 357 MEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLG--LLD 414
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G H + GL S IV ++L+DMY K I ++ VF+ K+ +WT+II L
Sbjct: 415 KGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLR 474
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL----------FDSM 484
+ + F++M ++P+S+T +SVL+ C R G + G+ + FD
Sbjct: 475 LNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGF 533
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
L + ++DM R GR+E A
Sbjct: 534 LPN-----------ALLDMYVRCGRMEPA 551
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G R HS++ K +G+ALL M+ + G + E+ VF + E+ F+W ++ A+
Sbjct: 113 GSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAK 172
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
G ++ +N + M G+RPD TF VL CG + +GR + +++ Y E D
Sbjct: 173 AGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIR-YGFESDVD 231
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIP 521
+ ++ M + G + A + ++P
Sbjct: 232 VVNALITMYVKCGDIFSARLVFDRMP 257
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/645 (33%), Positives = 362/645 (56%), Gaps = 15/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY K G A F+ + +VSW ++SG+ ++ +DA+ ++M G D
Sbjct: 122 LNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQ 181
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ + + C G QLH ++K G D + NALI+MY+++G++ A VF
Sbjct: 182 LTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTM 241
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLE 176
+ KD +SW ++++G+TQ G Y +EA+ +M R+G+ + + F S SAC E
Sbjct: 242 ISTKDLISWASMITGFTQLG-YEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPE 300
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+QI G+ K G G +V G L Y+K A + F ++ +++SW +I+
Sbjct: 301 FGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALA 360
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +A+ F +M G+ P+D+TF+ L+ A + +G IH IK +V
Sbjct: 361 NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAV 420
Query: 293 CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAF-FGVIKE 350
CN L+TMY + ++ D+ VF ++S ++SWNA++S +Q+ A + F + E
Sbjct: 421 CNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSE 480
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+KP+ T ++L AE +SL+ G + H +K GL D V + L+DMY K G +
Sbjct: 481 NKPDNITITTILGT--CAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKH 538
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF+ TQ +W+++I A+ G + +N F+ M N GV+P+ +T+L VL+ C
Sbjct: 539 ARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSH 598
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G HL+++M + I P+ +H SCMVD+L R G L EAE + + P +++ +
Sbjct: 599 IGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWK 658
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL +C+ HGNV++ ER A+ ++K++P+ S + VL+SN++A G+W+ VA LR MK G
Sbjct: 659 TLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMG 718
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
V+K G SW +V D +H F S D++HP+ IY M E L +M
Sbjct: 719 VQKVPGQSWIEVK--DQIHVFFSEDSSHPQRGNIYTMLEDLWLQM 761
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 6/281 (2%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T++ LI A + +K G+ IH +K+N + + N ++ MY + S++D+ K FD +
Sbjct: 82 TYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTM 141
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKH 375
R ++SW +ISGY+QNG A+ + +++ P+ TFGS++ A A DI L
Sbjct: 142 QLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDL-- 199
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G + H H+IK G D I +AL+ MY K G I + VF K +W ++I+ +
Sbjct: 200 GGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQ 259
Query: 436 HGDYESVMNQFKEMENKGV-RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
G + F++M +GV +P+ F SV + C GR + M + + +
Sbjct: 260 LGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQI-QGMCAKFGLGRNV 318
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
+ DM + G L A+ QI P L +++ A
Sbjct: 319 FAGCSLCDMYAKFGFLPSAKRAFYQIE-SPDLVSWNAIIAA 358
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 13/173 (7%)
Query: 352 KPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ Y +N + A ++ SLK+G+R H HI+K D ++ + +L+MYGK GS+ +
Sbjct: 79 EPSTY-----VNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKD 133
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+++ F+ Q +S +WT +IS +++G + + +M G PD +TF S++ C
Sbjct: 134 ARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCI 193
Query: 471 NGMIHKGRHLFDSMLK---DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
G I G L ++K D+H+ + ++ M + G++ A ++ I
Sbjct: 194 AGDIDLGGQLHGHVIKSGYDHHLIAQ----NALISMYTKFGQIAHASDVFTMI 242
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/653 (33%), Positives = 357/653 (54%), Gaps = 28/653 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFD---- 56
++MY + D A IF + + V W+ V++G+ ++D F + L V+ D
Sbjct: 212 VDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRND---RFTEGLKLYKVMLDEGMG 268
Query: 57 --AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
T+++A C F G QLH+ +K + VG A + MY++ R+V+AR+V
Sbjct: 269 VSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKV 328
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F+ PN S NA++ GY + D +EA+ + + L D +S + A +AC K
Sbjct: 329 FNTFPNPTRQSHNALIVGYARQ-DQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKG 387
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
G Q+HG+++K G ++ V N ++ Y+KC +A +F M ++ +SW +I+
Sbjct: 388 YLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAA 447
Query: 235 NR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ E+ ++LF M + P+D TF ++ A + + G +HG IK+ +
Sbjct: 448 HEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLD 507
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA-----QNGLSLAAVQAF 344
V + +I MY + + ++EK+ + L R +SWN++ISG++ +N LS +
Sbjct: 508 WFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQ 567
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
GVI P+ +T+ +VL+ + L G++ H I+K+ L SD + S ++DMY K
Sbjct: 568 VGVI----PDNFTYATVLDICANLATVEL--GKQIHGQILKLQLHSDVYIASTIVDMYSK 621
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G++ +S+ +F + ++ W+A+I A A HG E + F+EM+ + V+P+ F+SV
Sbjct: 622 CGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISV 681
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L C G + KG H F M Y ++P +HYSCMVD+LGR G++ EA EL+ +P
Sbjct: 682 LRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEA 741
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ ++LLG CR+ GNVE+ E+ A++L++++P S +YVL+SN+YA G W VA +R
Sbjct: 742 DDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRS 801
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKY 637
MK+ ++KE G SW V D +H F GD HPRSEEIY+ L EMK+
Sbjct: 802 FMKNYKLKKEPGCSWIQVR--DEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKW 852
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/531 (29%), Positives = 279/531 (52%), Gaps = 21/531 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLS-----GFEKSDDALSFALRMNLIGVVFDAV 58
Y G + A +F+++ D+VSWN++LS GF + ++ +M L+ + D
Sbjct: 114 YAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRK--SIEIFTKMRLLEIQHDYA 171
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T++ L C E + GLQ+H L ++ G DS+V G AL+ MYS +L A +F EM
Sbjct: 172 TFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEM 231
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P ++SV W+A+++GY ++ D E + M+ +G+ + +F SA +C ELG
Sbjct: 232 PERNSVCWSAVIAGYVRN-DRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNRE 237
Q+H ++K +G VG + Y+KC+ DA KVF + S +I R+
Sbjct: 291 TQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQ 350
Query: 238 D----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
D A+ +F+ ++ + ++++ G + A S EG +HGL +K V
Sbjct: 351 DQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVA 410
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N ++ MYA+ ++ ++ +FD++ ++ +SWNA+I+ + QN + F +++ + +
Sbjct: 411 NTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTME 470
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ YTFGSV+ A + +L +G H +IK G+ D VGSA++DMY K G + E++
Sbjct: 471 PDDYTFGSVVKACAGKK--ALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAE 528
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
++ +E++ +W +IIS + E+ ++ F M GV PD+ T+ +VL +C
Sbjct: 529 KIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLA 588
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
+ G+ + +LK ++ D Y S +VDM + G ++++ + + P
Sbjct: 589 TVELGKQIHGQILK---LQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP 636
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 227/501 (45%), Gaps = 51/501 (10%)
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+S C + + G Q H+ I G V+V N L+ Y + L A VFD+
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 118 MPNK-------------------------------DSVSWNAILSGYTQDGDYGVEAILA 146
MP + D VSWN++LS Y Q+G + ++I
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNG-FHRKSIEI 157
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
+M ++ D+ +F AC ++ LG Q+H ++I+MG+ + V G L+ YS
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST 217
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMIS-MNRED----AVSLFKEMRLDGVCPNDVTFIGL 261
C+ A +F M +RN + W+ +I+ R D + L+K M +G+ + TF
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
+ + + + G +H +KTNF + V + MYA+ + M D+ KVF+
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTR 337
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCH 380
S NALI GYA+ L A++ F + K + + L A A + G + H
Sbjct: 338 QSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIK--GYLEGIQLH 395
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
+K GLD + V + +LDMY K G++ E+ +F++ + K +W AII+A ++ E
Sbjct: 396 GLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVE 455
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCG-----RNGMIHKGRHLFDSMLKDYHIEPSPD 495
+ F M + PD TF SV+ C GM GR + M D+ +
Sbjct: 456 ETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVG---- 511
Query: 496 HYSCMVDMLGRVGRLEEAEEL 516
S ++DM + G L EAE++
Sbjct: 512 --SAIIDMYCKCGMLVEAEKI 530
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 8/231 (3%)
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESK 352
N +I YA +M+ ++ +FD + R+++SWN+++S Y QNG +++ F + + E +
Sbjct: 108 NTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQ 167
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
+ TF VL A ED L G + H I++G DSD + G+AL+DMY + +
Sbjct: 168 HDYATFAVVLKACTGIEDYGL--GLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAF 225
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F E E++ W+A+I+ R+ + + +K M ++G+ TF S C
Sbjct: 226 NIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLS 285
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
G L LK D+ + +DM + R+ +A ++ P
Sbjct: 286 AFELGTQLHAYALK---TNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP 333
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/615 (33%), Positives = 350/615 (56%), Gaps = 14/615 (2%)
Query: 31 VLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG 87
+L G+ KS D ALSF RM V ++ L C D+ G ++H ++ G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 88 LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
++ ++ MY++ ++ +A +FD MP +D V WN ++SGY Q+G + A++ +
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNG-FAKVALMLV 119
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
+ M +G R D ++ S A + L +G +HG ++ G+ + V+V L+ YSKC
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 208 EVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLI 262
A +F M R V+SW +MI S + E A+ +F++M +GV P +VT +G +
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
HA + ++ G+ +H L + S+ SV N LI+MY++ + + + +F L + ++
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
SWNA+I GYAQNG A+ AF + + KP+++T SV+ A+ AE + + H
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPAL--AELSIPRQAKWIHG 357
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
+I+ LD + V +AL+DMY K G+I ++++F+ + W A+I HG ++
Sbjct: 358 LVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKT 417
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+ FKEM+ ++P+ ITFL L+ C +G++ +G F+SM KDY IEP+ DHY MV
Sbjct: 418 SVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMV 477
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG 561
D+LGR GRL +A + + ++P PG++V ++LGAC+IH NV++GE+ A + K+ P G
Sbjct: 478 DLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGG 537
Query: 562 SYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRS 621
+VL++N+YA W VA +R M+ G++K G S ++G + +H F SG +HP+S
Sbjct: 538 YHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIG--NEVHSFYSGTTSHPQS 595
Query: 622 EEIYRMAECLGSEMK 636
++IY E L E++
Sbjct: 596 KKIYSYLETLVDEIR 610
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 227/422 (53%), Gaps = 15/422 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMY K Q + A +F+ + D+V WNT++SG+ + + AL LRM+ G D+
Sbjct: 72 VNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDS 131
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T + L D G+ +H +++ G +S V V AL+ MYS+ G + AR +FD
Sbjct: 132 ITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDG 191
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++ VSWN+++ GY Q GD A+L +M+ +G++ +V+ A AC +LE
Sbjct: 192 MDHRTVVSWNSMIDGYVQSGD-AEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLER 250
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
GK +H + ++ + VSV N L+S YSKC+ A +F+ + ++ ++SW MI +
Sbjct: 251 GKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQ 310
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N +A++ F EM+ + P+ T + +I A++ ++ ++ + IHGL I+ V
Sbjct: 311 NGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFV 370
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
L+ MYA+ ++ + K+FD ++ R +I+WNA+I GY +GL +V+ F + K +
Sbjct: 371 MTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTI 430
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIF 409
KPN TF L A+ A L C +K +P + A++D+ G+ G +
Sbjct: 431 KPNDITF---LCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLN 487
Query: 410 ES 411
++
Sbjct: 488 QA 489
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/658 (32%), Positives = 369/658 (56%), Gaps = 15/658 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++Y K G D A +F+ + + D VSW T+++G+ + + L +M L V +
Sbjct: 270 IDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINK 329
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V+ +A + G ++H ++ +DS++ V L+ MY++ G +A+++F
Sbjct: 330 VSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWG 389
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +D V+W+AI++ Q G Y EA+ EM + ++ + V+ S AC L+L
Sbjct: 390 LQGRDLVAWSAIIAALVQTG-YPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GK IH ++K + +S G L+S Y+KC A F RM R++++W ++I+ +
Sbjct: 449 GKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQ 508
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ +F ++RL + P+ T +G++ A ++ N + +G IHGL +K F S+ V
Sbjct: 509 IGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHV 568
Query: 293 CNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
N LI MYA+ S+ +E +F++ ++ ++WN +I+ Y QNG + A+ +F + E+
Sbjct: 569 KNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN 628
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
PN+ TF SVL A AA + + G H+ II++G S+ +VG++L+DMY K G +
Sbjct: 629 FHPNSVTFVSVLPA--AAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXY 686
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S+++FNE K +W A++S A HG + + F M+ V+ DS++F+SVL+ C
Sbjct: 687 SEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRH 746
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +GR +F SM YHI+P +HY+CMVD+LGR G +E + +P P V
Sbjct: 747 XGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWG 806
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLG+CR+H NV++GE D L+K+EP +V++S++YA+ G W R M G
Sbjct: 807 ALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLG 866
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
++K G SW ++ + +H F GD +HP+ E ++ + L +M+ + +R+ L
Sbjct: 867 LKKTPGCSWVELK--NKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVL 922
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 167/613 (27%), Positives = 293/613 (47%), Gaps = 34/613 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N+Y + D A +F++ NP + WN+++ + +S ++AL M G+ D
Sbjct: 70 INLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDK 129
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L C G+ H I + GL+ +V++G L+ MYS+ G L AR VFD+
Sbjct: 130 YTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDK 189
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D V+WNA+++G +Q D EA+ M G+ VS + N+EL
Sbjct: 190 MPKRDVVAWNAMIAGLSQSED-PCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIEL 248
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
+ IHG + + + VS G L+ YSKC A +VF +M D++ +SW TM++
Sbjct: 249 CRSIHGYVFRRDFSSAVSNG--LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAH 306
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + LF +M+L V N V+ + A + +++G+ IHG ++ S+ V
Sbjct: 307 NGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILV 366
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
L+ MYA+ + ++++F L R++++W+A+I+ Q G A+ F + +
Sbjct: 367 ATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKM 426
Query: 352 KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN T S+L A D+S LK G+ H +K +DSD G+AL+ MY K G
Sbjct: 427 KPNRVTLMSILPACA---DLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTA 483
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ FN + W ++I+ A+ GD + ++ F ++ + PD+ T + V+ C
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACAL 543
Query: 471 NGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ +G + ++K D H++ + ++DM + G L AE L +
Sbjct: 544 LNDLDQGTCIHGLIVKLGFESDCHVK------NALIDMYAKCGSLPSAEFLFNKTDFTKD 597
Query: 526 LSVLQSLLGACRIHGNVEMGERIAD-ALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
++ A +G+ + E I+ M++E S +S L A +A R+
Sbjct: 598 EVTWNVIIAAYMQNGHAK--EAISSFHQMRLENFHPNSVTFVSVLPAAA----YLAAFRE 651
Query: 585 GMKSKGVRKEVGF 597
GM ++GF
Sbjct: 652 GMAFHACIIQMGF 664
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 214/409 (52%), Gaps = 10/409 (2%)
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
LQ+H+ I+ G + + LI +YS + + AR VFD PN + WN+++ YT+
Sbjct: 49 LQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRS 107
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
Y EA+ M+ KGL D +FT AC NL+ G HG + G V +
Sbjct: 108 KQYN-EALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFI 166
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGV 251
G L+ YSK A +VF +M R+V++W MI S + +AV F+ M+L GV
Sbjct: 167 GAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGV 226
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ V+ + L I + ++ R IHG + +F S +V N LI +Y++ + + +
Sbjct: 227 EPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARR 284
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDI 371
VFD++ ++ +SW +++GYA NG V F +K +V + AAE I
Sbjct: 285 VFDQMVDQDDVSWGTMMAGYAHNG-CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETI 343
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
L+ G+ H ++ +DSD +V + L+ MY K G +++++F Q + AW+AII+
Sbjct: 344 DLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
AL + G E ++ F+EM+N+ ++P+ +T +S+L C ++ G+ +
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+ II G + + L+++Y ++ VF+ T S W ++I A R Y
Sbjct: 52 HAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQY 110
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC 499
+ + M KG+ PD TF VL C + +G F + +E +
Sbjct: 111 NEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV-WFHGEIDRRGLERDVFIGAG 169
Query: 500 MVDMLGRVGRLEEAEELVGQIP 521
+VDM ++G L+ A E+ ++P
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMP 191
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/651 (33%), Positives = 364/651 (55%), Gaps = 23/651 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIG-VVFD 56
+N+Y G + C F+ + D+ +WN+++S + + +A+ ++ L+ + D
Sbjct: 158 VNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPD 217
Query: 57 AVTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T+ L C G L G ++H K G V+V +LI MYSR+G AR +F
Sbjct: 218 FYTFPPVLKAC----GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 273
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D+MP +D SWNA++SG Q+G+ +A+ L EM +G++++ V+ S C ++
Sbjct: 274 DDMPFRDMGSWNAMISGLIQNGN-AAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDI 332
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
IH IK G + V N L++ Y+K DA K F++M +V+SW ++I+
Sbjct: 333 STAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAY 392
Query: 235 -NREDAVS---LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+D V+ F +M+L+G P+ +T + L ++ K R +HG ++ +L E
Sbjct: 393 EQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMED 452
Query: 291 SVC-NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGV 347
V N ++ MYA+ + + KVF+ + +++ISWN LI+GYAQNGL+ A++ +
Sbjct: 453 VVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEE 512
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
KE PN T+ S+L A A +L+ G + H +IK L D V + L+D+YGK G
Sbjct: 513 CKEIIPNQGTWVSILPAY--AHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGR 570
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ +F + ++S W AIIS HG E + F EM ++GV+PD +TF+S+L+
Sbjct: 571 LVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSA 630
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C +G + +G+ F ++++Y I+PS HY CMVD+LGR G LE A + + +P P S
Sbjct: 631 CSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDAS 689
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+ +LLGACRIHGN+E+G+ +D L +++ G YVL+SN+YA G WE V +R +
Sbjct: 690 IWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLAR 749
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+G++K G+S +V + F +G+ +HP+ +EIY L ++MK L
Sbjct: 750 ERGLKKTPGWSTIEVN--RKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSL 798
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/532 (27%), Positives = 268/532 (50%), Gaps = 29/532 (5%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
F LH+L+V G +++ L+ +Y+ G + +R FD++P KD +WN+++S Y
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193
Query: 135 QDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
+G + EAI +++ +R D +F ACG L G++IH + K+G+ +
Sbjct: 194 HNGHFH-EAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWN 249
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRL 248
V V L+ YS+ TG A +F M R++ SW MIS N A+ + EMRL
Sbjct: 250 VFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 309
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
+G+ N VT + ++ + +IH IK + V N LI MYA+F +++D
Sbjct: 310 EGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLED 369
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVG 366
+ K F ++ +++SWN++I+ Y QN + A FF ++ + +P+ T S+ + V
Sbjct: 370 ARKAFQQMFITDVVSWNSIIAAYEQNDDPVTA-HGFFVKMQLNGFQPDLLTLVSLASIVA 428
Query: 367 AAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ D K+ + H I++ G L D ++G+A++DMY K G + + +VF K +
Sbjct: 429 QSRD--CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVIS 486
Query: 426 WTAIISALARHGDYESVMNQFKEMEN-KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W +I+ A++G + +K ME K + P+ T++S+L G + +G + +
Sbjct: 487 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRV 546
Query: 485 LK-DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR-IHGNV 542
+K + H++ +C++D+ G+ GRL +A L Q+P SV + + +C IHG+
Sbjct: 547 IKTNLHLDVFVA--TCLIDVYGKCGRLVDAMSLFYQVPQES--SVTWNAIISCHGIHGHA 602
Query: 543 EMGERIADALMK--MEPAGSGSYVLMSNL----YAEKGDWEMVAILRKGMKS 588
E ++ ++ ++P L+S + E+G W + G+K
Sbjct: 603 EKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKP 654
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/632 (34%), Positives = 364/632 (57%), Gaps = 14/632 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVT 59
MY K +F + +F+ + ++VSWN + S + + D +A+ M L G+ + +
Sbjct: 201 MYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFS 260
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
S+ ++ C G +H ++K G D + + NAL+ MY++ G L +A VF+++
Sbjct: 261 LSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIK 320
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
D VSWNA+++G ++ +A+ L +M R G+ + + +SA AC ELG+
Sbjct: 321 QPDIVSWNAVIAGCVLH-EHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGR 379
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
Q+H +KM + + V L+ YSKC++ DA F + ++++I+W +IS +
Sbjct: 380 QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYW 439
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+SLF EM +G+ N T ++ + + +V R +HGL +K+ F S+ V N
Sbjct: 440 EDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVN 499
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKP 353
LI Y + ++D+E++F+E + +++S+ ++I+ YAQ G A++ F + E KP
Sbjct: 500 SLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKP 559
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ + S+LNA A + + G++ H HI+K G D G++L++MY K GSI ++ R
Sbjct: 560 DRFVCSSLLNA--CANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGR 617
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
F+E E+ +W+A+I LA+HG + F +M +GV P+ IT +SVL C G+
Sbjct: 618 AFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGL 677
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ + + F+SM + + +P +HY+CM+D+LGR G++ EA ELV ++P SV +LL
Sbjct: 678 VTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALL 737
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
GA RIH +VE+G R A+ L +EP SG++VL++N+YA G WE VA +R+ M+ V+K
Sbjct: 738 GAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKK 797
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
E G SW +V D ++ F GD +H RS+EIY
Sbjct: 798 EPGMSWIEVK--DKVYTFLVGDRSHYRSQEIY 827
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 157/563 (27%), Positives = 294/563 (52%), Gaps = 14/563 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+N+Y K F A + + + PD+VSW+ ++SG+ ++ AL M+L+GV +
Sbjct: 98 INLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNE 157
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+S+ L C + G Q+H ++V G + +V+V N L+ MY++ ++++R+FDE
Sbjct: 158 FTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDE 217
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P ++ VSWNA+ S Y Q D+ EA+ EM+ G++ + S +S +AC ++
Sbjct: 218 IPERNVVSWNALFSCYVQI-DFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK IHG IK+GY N L+ Y+K DA VF ++ +++SW +I+
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E A+ L +M+ G+CPN T + A + L + GR +H +K + S+ V
Sbjct: 337 HEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFV 396
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
L+ MY++ + ++D+ F+ L +++I+WNA+ISGY+Q + A+ F + KE
Sbjct: 397 SVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGI 456
Query: 353 P-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
N T ++L + + + + ++ H +K G SD V ++L+D YGK + ++
Sbjct: 457 GFNQTTLSTILKSTAGLQVVHV--CRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDA 514
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+R+F E ++T++I+A A++G E + F EM++ ++PD S+L C
Sbjct: 515 ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANL 574
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
+G+ L +LK Y + +V+M + G +++A ++ G+ +
Sbjct: 575 SAFEQGKQLHVHILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWSA 632
Query: 532 LLGACRIHGNVEMGERIADALMK 554
++G HG+ ++ + ++K
Sbjct: 633 MIGGLAQHGHGRQALQLFNQMLK 655
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 159/511 (31%), Positives = 269/511 (52%), Gaps = 21/511 (4%)
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+V+YS LS C + GLQ+H+ I K GL + + N LI +YS+ AR++ D
Sbjct: 56 SVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVD 115
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E D VSW+A++SGY Q+G G A++A EM G++ + +F+S AC K+L
Sbjct: 116 ESSEPDLVSWSALISGYAQNG-LGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLR 174
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
+GKQ+HGV + G+ V V N L+ Y+KC+ D+ ++F + +RNV+SW + S
Sbjct: 175 IGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYV 234
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +AV LF EM L G+ PN+ + +++A + G++IHG IK + +P
Sbjct: 235 QIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPF 294
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
N L+ MYA+ + D+ VF+++ +I+SWNA+I+G + A++ G +K S
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALE-LLGQMKRS 353
Query: 352 K--PNAYTFGSVLNAVGAAEDISLKH-GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
PN +T S L A + LK G++ HS ++K+ ++SD V L+DMY K +
Sbjct: 354 GICPNIFTLSSALKACAG---MGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 410
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+++ FN EK AW AIIS +++ + ++ F EM +G+ + T ++L
Sbjct: 411 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 470
Query: 469 GRNGMIHKGRHLFDSMLKD-YHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPGGPG 525
++H R + +K +H D Y + ++D G+ +E+AE + + G
Sbjct: 471 AGLQVVHVCRQVHGLSVKSGFH----SDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDL 526
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKME 556
+S S++ A +G E ++ + ME
Sbjct: 527 VS-FTSMITAYAQYGQGEEALKLFLEMQDME 556
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 207/412 (50%), Gaps = 17/412 (4%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P K + + ++QD AIL LI+ + VS++ S C K+L
Sbjct: 19 LPFKPAPKLIQTVPQFSQDPQ--TTAILNLID--KGNFTPTSVSYSKLLSQCCTTKSLRP 74
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G QIH K G S+ N L++ YSKC G A K+ + +++SW+ +IS +
Sbjct: 75 GLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQ 134
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+ F EM L GV N+ TF ++ A SI ++ G+ +HG+ + + F + V
Sbjct: 135 NGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKES 351
N L+ MYA+ + DS+++FDE+ R ++SWNAL S Y Q AV F+ V+
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGI 254
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN ++ S++NA D S G+ H ++IK+G D DP +AL+DMY K G + ++
Sbjct: 255 KPNEFSLSSMVNACTGLRDSS--RGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADA 312
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
VF + ++ +W A+I+ H +E + +M+ G+ P+ T S L C
Sbjct: 313 ISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGM 372
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIP 521
G+ GR L S++K ++ D + +VDM + LE+A +P
Sbjct: 373 GLKELGRQLHSSLMK---MDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP 421
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/643 (34%), Positives = 362/643 (56%), Gaps = 23/643 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAV-- 58
++M+ G D A IFN ++ D +SWN++++ + ++ + NL+ D V
Sbjct: 303 ISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNS 362
Query: 59 -TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ST LS D + +G +H L+VK G DS V V N L+ MY+ GR EA VF +
Sbjct: 363 TTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQ 422
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP KD +SWN++++ + DG ++A+ L M+R G +++V+FTSA +AC + +
Sbjct: 423 MPTKDLISWNSLMASFVNDGR-SLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDK 481
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+ +HG+ + G + +GN L+S Y K + +V +M R+V++W +I E
Sbjct: 482 GRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAE 541
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISI-GNLVKEGRMIHGLCIKTNFLSEPS 291
+ A++ F+ +R++GV N +T + ++ A + G+L++ G+ +H + F S+
Sbjct: 542 NEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEH 601
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG-----LSLAAVQAFFG 346
V N LITMYA+ + S+ +F+ L R II+WNA+++ A +G L L + FG
Sbjct: 602 VKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFG 661
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ + ++F L+A AA+ L+ GQ+ H +K+G + D + +A DMY K G
Sbjct: 662 L----SLDQFSFSEGLSA--AAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCG 715
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I E ++ + +S +W +ISAL RHG +E V F EM G++P +TF+S+LT
Sbjct: 716 EIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLT 775
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G++ +G +D + KD+ +EP+ +H C++D+LGR GRL EAE + ++P P
Sbjct: 776 ACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPND 835
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +SLL +C+IH +++ G + A+ L K+EP +VL SN++A G WE V +RK M
Sbjct: 836 LVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQM 895
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
K ++K+ SW + D + F GD THP++ EIY E
Sbjct: 896 GFKNIKKKQACSWVKLK--DKVSSFGIGDRTHPQTMEIYAKLE 936
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 175/617 (28%), Positives = 317/617 (51%), Gaps = 39/617 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K G+ A +F+ + + VSWNT++SG + + + F +M +G+ +
Sbjct: 100 INMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSS 159
Query: 58 VTYSTALSFCLDHEGFLF--GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ ++ C G +F G+Q+H + K GL S+VYV A++ +Y +G + +R+VF
Sbjct: 160 FVIASLVTAC-GRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 218
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKN 174
+EMP+++ VSW +++ GY+ G+ E ++ + + MR +G+ + S + S+CG K+
Sbjct: 219 EEMPDRNVVSWTSLMVGYSDKGE--PEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKD 276
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
LG+QI G IK G + ++V N L+S + AN +F ++ +R+ ISW ++++
Sbjct: 277 ESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAA 336
Query: 235 -----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ E++ +F MR N T L+ + + K GR IHGL +K F S
Sbjct: 337 YAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSV 396
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
VCN L+ MYA ++++ VF ++ +++ISWN+L++ + +G SL A+ +I+
Sbjct: 397 VCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIR 456
Query: 350 ESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
K N TF S L A + E G+ H ++ GL + I+G+AL+ MYGK G +
Sbjct: 457 TGKSVNYVTFTSALAACFSPE--FFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGM 514
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S+RV + + AW A+I A + D + + F+ + +GV + IT +SVL+ C
Sbjct: 515 STSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSAC 574
Query: 469 GRNG-MIHKGRHLFDSML-----KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
G ++ +G+ L ++ D H++ S ++ M + G L +++L +
Sbjct: 575 LVPGDLLERGKPLHAYIVSAGFESDEHVKNS------LITMYAKCGDLSSSQDLFNGLD- 627
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG--SYVLMSNLYAEKGDWEMVA 580
+ ++L A HG+ GE + + KM G + L A +A
Sbjct: 628 NRSIITWNAILAANAHHGH---GEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAK----LA 680
Query: 581 ILRKGMKSKGVRKEVGF 597
+L +G + G+ ++GF
Sbjct: 681 VLEEGQQLHGLAVKLGF 697
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 230/473 (48%), Gaps = 27/473 (5%)
Query: 67 CLDHEGF------LFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
C D GF G LH+L VK + V N LI MY+++GR+ AR +FD+MP
Sbjct: 62 CFDQTGFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPV 121
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL-ELGK 179
++ VSWN ++SG + G Y +E + +M G++ S +ACG ++ G
Sbjct: 122 RNEVSWNTMMSGIVRVGLY-LEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGV 180
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SM 234
Q+HG K G + V V ++ Y + + KVF M DRNV+SWT+++
Sbjct: 181 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 240
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
E+ + ++K MR +GV N+ + +I + + GR I G IK+ S+ +V N
Sbjct: 241 EPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVEN 300
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SK 352
LI+M+ ++ + +F+++S R+ ISWN++++ YAQNG + F +++ +
Sbjct: 301 SLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNG-HIEESSRIFNLMRRFHDE 359
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
N+ T ++L+ +G + K G+ H ++K+G DS V + LL MY G E+
Sbjct: 360 VNSTTVSTLLSVLGDVDH--QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEAD 417
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
VF + K +W +++++ G + M G + +TF S L C
Sbjct: 418 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPE 477
Query: 473 MIHKGRHLFD----SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
KGR L S L D I + +V M G++G + + ++ Q+P
Sbjct: 478 FFDKGRILHGLVVVSGLFDNQIIGNA-----LVSMYGKIGGMSTSRRVLLQMP 525
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 82/181 (45%), Gaps = 12/181 (6%)
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNA 355
L+ M+ RF S + + F L C E + + G + F + P
Sbjct: 9 LMKMFYRFVSRHSNTRRFSTLQCLERVE--------EEEGKKVIRWSGCFSLSDHWNPEL 60
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
F + G ++ G+ H+ +K + + + L++MY K G + ++ +F
Sbjct: 61 SCF----DQTGFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLF 116
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
++ ++E +W ++S + R G Y M F++M + G++P S S++T CGR+G +
Sbjct: 117 DKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMF 176
Query: 476 K 476
+
Sbjct: 177 R 177
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/658 (32%), Positives = 369/658 (56%), Gaps = 15/658 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++Y K G D A +F+ + + D VSW T+++G+ + + L +M L V +
Sbjct: 270 IDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINK 329
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V+ +A + G ++H ++ +DS++ V L+ MY++ G +A+++F
Sbjct: 330 VSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWG 389
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +D V+W+AI++ Q G Y EA+ EM + ++ + V+ S AC L+L
Sbjct: 390 LQGRDLVAWSAIIAALVQTG-YPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GK IH ++K + +S G L+S Y+KC A F RM R++++W ++I+ +
Sbjct: 449 GKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQ 508
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ +F ++RL + P+ T +G++ A ++ N + +G IHGL +K F S+ V
Sbjct: 509 IGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHV 568
Query: 293 CNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
N LI MYA+ S+ +E +F++ ++ ++WN +I+ Y QNG + A+ +F + E+
Sbjct: 569 KNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN 628
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
PN+ TF SVL A AA + + G H+ II++G S+ +VG++L+DMY K G +
Sbjct: 629 FHPNSVTFVSVLPA--AAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDY 686
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S+++FNE K +W A++S A HG + + F M+ V+ DS++F+SVL+ C
Sbjct: 687 SEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRH 746
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +GR +F SM YHI+P +HY+CMVD+LGR G +E + +P P V
Sbjct: 747 AGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWG 806
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLG+CR+H NV++GE D L+K+EP +V++S++YA+ G W R M G
Sbjct: 807 ALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLG 866
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
++K G SW ++ + +H F GD +HP+ E ++ + L +M+ + +R+ L
Sbjct: 867 LKKTPGCSWVELK--NKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVL 922
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 167/613 (27%), Positives = 293/613 (47%), Gaps = 34/613 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N+Y + D A +F++ NP + WN+++ + +S ++AL M G+ D
Sbjct: 70 INLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDK 129
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L C G+ H I + GL+ +V++G L+ MYS+ G L AR VFD+
Sbjct: 130 YTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDK 189
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D V+WNA+++G +Q D EA+ M G+ VS + N+EL
Sbjct: 190 MPKRDVVAWNAMIAGLSQSED-PCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIEL 248
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
+ IHG + + + VS G L+ YSKC A +VF +M D++ +SW TM++
Sbjct: 249 CRSIHGYVFRRDFSSAVSNG--LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAH 306
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + LF +M+L V N V+ + A + +++G+ IHG ++ S+ V
Sbjct: 307 NGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILV 366
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
L+ MYA+ + ++++F L R++++W+A+I+ Q G A+ F + +
Sbjct: 367 ATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKM 426
Query: 352 KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN T S+L A D+S LK G+ H +K +DSD G+AL+ MY K G
Sbjct: 427 KPNRVTLMSILPACA---DLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTA 483
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ FN + W ++I+ A+ GD + ++ F ++ + PD+ T + V+ C
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACAL 543
Query: 471 NGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ +G + ++K D H++ + ++DM + G L AE L +
Sbjct: 544 LNDLDQGTCIHGLIVKLGFESDCHVK------NALIDMYAKCGSLPSAEFLFNKTDFTKD 597
Query: 526 LSVLQSLLGACRIHGNVEMGERIAD-ALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
++ A +G+ + E I+ M++E S +S L A +A R+
Sbjct: 598 EVTWNVIIAAYMQNGHAK--EAISSFHQMRLENFHPNSVTFVSVLPAAA----YLAAFRE 651
Query: 585 GMKSKGVRKEVGF 597
GM ++GF
Sbjct: 652 GMAFHACIIQMGF 664
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 214/409 (52%), Gaps = 10/409 (2%)
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
LQ+H+ I+ G + + LI +YS + + AR VFD PN + WN+++ YT+
Sbjct: 49 LQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRS 107
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
Y EA+ M+ KGL D +FT AC NL+ G HG + G V +
Sbjct: 108 KQYN-EALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFI 166
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGV 251
G L+ YSK A +VF +M R+V++W MI S + +AV F+ M+L GV
Sbjct: 167 GAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGV 226
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ V+ + L I + ++ R IHG + +F S +V N LI +Y++ + + +
Sbjct: 227 EPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARR 284
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDI 371
VFD++ ++ +SW +++GYA NG V F +K +V + AAE I
Sbjct: 285 VFDQMVDQDDVSWGTMMAGYAHNG-CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETI 343
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
L+ G+ H ++ +DSD +V + L+ MY K G +++++F Q + AW+AII+
Sbjct: 344 DLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
AL + G E ++ F+EM+N+ ++P+ +T +S+L C ++ G+ +
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+ II G + + L+++Y ++ VF+ T S W ++I A R Y
Sbjct: 52 HAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQY 110
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC 499
+ + M KG+ PD TF VL C + +G F + +E +
Sbjct: 111 NEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV-WFHGEIDRRGLERDVFIGAG 169
Query: 500 MVDMLGRVGRLEEAEELVGQIP 521
+VDM ++G L+ A E+ ++P
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMP 191
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/643 (34%), Positives = 362/643 (56%), Gaps = 26/643 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N+Y + G A +F+ + + + V+W ++SG+ ++ +DA M G + +
Sbjct: 42 INVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNR 101
Query: 58 VTYSTALSFCLDHEGFLF---GLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARR 113
+ +A+ C E L+ G Q+H ++ GL D++V VGN LI MY++ G + AR
Sbjct: 102 FAFGSAIRAC--QESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARS 159
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VF M +KDSVSWN++++G Q+ + +A+ + M + GL + + SA S+C
Sbjct: 160 VFGLMVDKDSVSWNSMITGLDQNKCFE-DAVKSYNSMRKTGLMPSNFALISALSSCASLG 218
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+ LG+Q HG IK+G VSV N L++ Y++ + KVF M +R+ +SW T+I
Sbjct: 219 CILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIG 278
Query: 234 M------NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ +A+ +F EM G PN VTFI L+ +S + K IH L +K N
Sbjct: 279 ALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVK 338
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFG 346
+ ++ N L+ Y + M++ E++F +S R+ +SWN++ISGY N L A+ +
Sbjct: 339 DDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWL 398
Query: 347 VIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++ + + +TF +VL+A +L+ G H+ I+ L+SD ++GSAL+DMY K
Sbjct: 399 MMQRGQRLDCFTFATVLSACATVA--TLECGMEVHACAIRACLESDVVIGSALVDMYSKC 456
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G I + R FN ++ ++W ++IS ARHG ++ + F M+ G PD ITF+ VL
Sbjct: 457 GRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVL 516
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ +G F SM + Y + P +HYSCMVD+LGR G L++ E + ++P P
Sbjct: 517 SACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPN 576
Query: 526 LSVLQSLLGACRIHGN---VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
+ + +++LGAC GN E+G R A+ L M+P + +YVL+SN+YA G WE +A
Sbjct: 577 ILIWRTVLGAC-CRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMART 635
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
R+ M+ V+KE G SW + DG+H F +GDN+HP IY
Sbjct: 636 RRAMREAAVKKEAGCSWVTMK--DGVHVFVAGDNSHPEKGLIY 676
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 235/454 (51%), Gaps = 16/454 (3%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
H ++K G DS++++ N LI +Y R G V AR++FDEMP+++ V+W ++SGYTQ+G
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNG- 80
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL--ELGKQIHGVSIKMGYG-THVS 195
+A L EM+ +G + +F SA AC E L G+Q+HG +I+ G V+
Sbjct: 81 MPEDACGVLKEMIFEGFLPNRFAFGSAIRAC-QESMLWRRKGRQVHGYAIRTGLNDAKVA 139
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNR--EDAVSLFKEMRLDG 250
VGN L++ Y+KC A VF M D++ +SW +MI+ N+ EDAV + MR G
Sbjct: 140 VGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTG 199
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
+ P++ I + + + + G+ HG IK + SV N L+ +YA + + +
Sbjct: 200 LMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQ 259
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLA-AVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
KVF + R+ +SWN +I A +G S++ A++ F +++ PN TF ++L V +
Sbjct: 260 KVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSL 319
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE-KSEFAWT 427
L H + H+ I+K + D + +ALL YGK G + + +F+ E + E +W
Sbjct: 320 STSKLSH--QIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWN 377
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
++IS + M+ M +G R D TF +VL+ C + G + ++
Sbjct: 378 SMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRA 437
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+E S +VDM + GR++ A +P
Sbjct: 438 C-LESDVVIGSALVDMYSKCGRIDYASRFFNLMP 470
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
+ + H +K F S+ +CN LI +Y R + K+FDE+ R ++W LISGY
Sbjct: 18 DANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYT 77
Query: 333 QNGLSLAAVQAFFGVIKES-----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
QNG+ A GV+KE PN + FGS + A + + + G++ H + I+ G
Sbjct: 78 QNGMPEDAC----GVLKEMIFEGFLPNRFAFGSAIRACQESM-LWRRKGRQVHGYAIRTG 132
Query: 388 L-DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
L D+ VG+ L++MY K G I ++ VF +K +W ++I+ L ++ +E + +
Sbjct: 133 LNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSY 192
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
M G+ P + +S L+ C G I G+
Sbjct: 193 NSMRKTGLMPSNFALISALSSCASLGCILLGQQ 225
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/625 (34%), Positives = 353/625 (56%), Gaps = 19/625 (3%)
Query: 30 TVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD 89
+VL + +AL M L G + + L C G ++H+ I+K G+
Sbjct: 20 SVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQ 79
Query: 90 SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
Y+ N L++MY++ G L +ARRVFD + +++ VSW A++ + G+ +EA
Sbjct: 80 PNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVA-GNKNLEAFKCYET 138
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M G + D V+F S +A + + L+LG+++H ++ G VG L+ Y+KC
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGD 198
Query: 210 TGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHA 264
A +F R+ ++NV++WT +I+ + A+ L + M+ V PN +TF ++
Sbjct: 199 ISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQG 258
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+ ++ G+ +H I++ + E V N LITMY + ++++ K+F +L R++++W
Sbjct: 259 CTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTW 318
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
A+++GYAQ G A+ F + ++ KP+ TF SVL + + L+ G+R H +
Sbjct: 319 TAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPA--FLQEGKRIHQQL 376
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS-ALARHGDYESV 442
+ G + D + SAL+ MY K GS+ ++ VFN+ E++ AWTAII+ A+HG
Sbjct: 377 VHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREA 436
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
+ F +M+ +G++PD +TF SVL+ C G++ +GR F SM DY I+P +HYSC VD
Sbjct: 437 LEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVD 496
Query: 503 MLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGS 562
+LGR G LEEAE ++ +P PG SV +LL ACR+H +VE GER A+ ++K++P G+
Sbjct: 497 LLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGA 556
Query: 563 YVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG-LHGFSSGDNTHPRS 621
YV +S++YA G +E +R+ M+ + V KE G SW +V DG +H F D +HP S
Sbjct: 557 YVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEV---DGKVHVFHVEDKSHPES 613
Query: 622 EEIY----RMAECLGSEMKYLNSKR 642
E+IY ++ E + EM Y+ R
Sbjct: 614 EQIYVELGKLTEQI-KEMGYVPDTR 637
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/454 (30%), Positives = 244/454 (53%), Gaps = 19/454 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G A +F+++ + +IVSW ++ F K+ +A M L G D
Sbjct: 89 LSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDK 148
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ + L+ + E G ++H IV+ GL+ E VG +L+ MY++ G + +AR +FD
Sbjct: 149 VTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDR 208
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLE 176
+P K+ V+W +++GY Q G V+ L L+E M++ + + ++F S C LE
Sbjct: 209 LPEKNVVTWTLLIAGYAQQGQ--VDVALELLETMQQAEVAPNKITFASILQGCTTPAALE 266
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN- 235
GK++H I+ GYG + V N L++ Y KC +A K+F + R+V++WT M++
Sbjct: 267 HGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYA 326
Query: 236 ----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++A++LF+ M+ G+ P+ +TF ++ + S ++EG+ IH + + +
Sbjct: 327 QLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVY 386
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG-YAQNGLSLAAVQAFFGVIKE 350
+ + L++MYA+ SM D+ VF+++S R +++W A+I+G AQ+G A++ F + K+
Sbjct: 387 LQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQ 446
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGS 407
KP+ TF SVL+ A + L R H + + P+V S +D+ G+ G
Sbjct: 447 GIKPDKVTFTSVLS---ACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGH 503
Query: 408 IFESQRV-FNETQEKSEFAWTAIISALARHGDYE 440
+ E++ V + W A++SA H D E
Sbjct: 504 LEEAENVILSMPFIPGPSVWGALLSACRVHSDVE 537
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/646 (32%), Positives = 361/646 (55%), Gaps = 18/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G + + +F + ++V+W ++L+G + + ++ RM G+ +
Sbjct: 142 VDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNP 201
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ LS G ++H+ VKFG S V+V N+L+ MY++ G + +A+ VF+
Sbjct: 202 FTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNW 261
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSWN +++G Q + +EA+ E ++ ++ + C + K L L
Sbjct: 262 METRDMVSWNTLMAGL-QLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLAL 320
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMISMNR 236
+Q+H +K G+ +V L YSKC DA +F RNV+SWT +IS
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCI 380
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ AV LF MR D V PN+ T+ ++ A S+ L + IH IKTN+ PS
Sbjct: 381 QNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA-SLSILPPQ---IHAQVIKTNYQHIPS 436
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
V L+ Y++F S +D+ +F + +++++W+A++S +AQ G A F + I+
Sbjct: 437 VGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQG 496
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN +T SV++A A + G++ H+ IK V SAL+ MY ++G+I
Sbjct: 497 IKPNEFTISSVIDAC-ACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDS 555
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+Q VF ++ +W ++IS A+HG + F++ME G++ D +TFL+V+ C
Sbjct: 556 AQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTH 615
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
NG++ +G+ FDSM++D+ I P+ +HY+CMVD+ R G+L+E L+ +P G V +
Sbjct: 616 NGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWR 675
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGACR+H NVE+G+ AD L+ +EP S +YVL+SN+YA G W+ +RK M +
Sbjct: 676 TLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRK 735
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V+KE G SW + + +H F + D +HP S++IY+ + + + +K
Sbjct: 736 VKKEAGCSWIQIK--NKVHSFIAFDKSHPMSDQIYKKLKVIITRLK 779
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 144/474 (30%), Positives = 235/474 (49%), Gaps = 21/474 (4%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDS-EVYVGNALITMYSRWGRLVE 110
GV+ D+ T S L C + G QLH L VK G D EV G +L+ MY + G + E
Sbjct: 94 GVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCE 153
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
VF+ MP K+ V+W ++L+G E + M +G+ + +F S SA
Sbjct: 154 GIEVFEGMPKKNVVTWTSLLTGCAH-AQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVA 212
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ L+LG+++H S+K G + V V N LM+ Y+KC + DA VF M R+++SW T
Sbjct: 213 SQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNT 272
Query: 231 MIS---MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+++ +N +A+ LF E R T+ +I + + R +H +K
Sbjct: 273 LMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHG 332
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNG-LSLAAVQA 343
F +V L Y++ + D+ +F + R ++SW A+ISG QNG + LA V
Sbjct: 333 FHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVV-- 390
Query: 344 FFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F ++E + PN +T+ ++L A +S+ Q H+ +IK P VG+ALL
Sbjct: 391 LFSRMREDRVMPNEFTYSAMLKA-----SLSILPPQ-IHAQVIKTNYQHIPSVGTALLAS 444
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K GS ++ +F ++K AW+A++S A+ GD E F +M +G++P+ T
Sbjct: 445 YSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTI 504
Query: 462 LSVLTVCG-RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
SV+ C + + +GR F ++ Y + S +V M R G ++ A+
Sbjct: 505 SSVIDACACPSAGVDQGRQ-FHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQ 557
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 185/365 (50%), Gaps = 14/365 (3%)
Query: 111 ARRVFDEMPNKDS-VSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASA 168
AR DE+P +D+ V N +L Y + G V +L + R+G + +D + + A
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRG--MVPEVLDQFSVARRGGVLVDSATLSCVLKA 108
Query: 169 CGHEKNLELGKQIHGVSIKMGYGT-HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
C + LG+Q+H + +K G+ VS G L+ Y KC + +VF M +NV++
Sbjct: 109 CRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVT 168
Query: 228 WTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
WT++++ + ++LF MR +G+ PN TF ++ A++ + G+ +H +
Sbjct: 169 WTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSV 228
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K S VCN L+ MYA+ ++D++ VF+ + R+++SWN L++G N L A+Q
Sbjct: 229 KFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQ 288
Query: 343 AFF-GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F K T+ +V+ + ++L ++ HS ++K G V +AL D
Sbjct: 289 LFHESRATMGKMTQSTYATVIKLCANLKQLAL--ARQLHSCVLKHGFHLTGNVMTALADA 346
Query: 402 YGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
Y K G + ++ +F+ T ++ +WTAIIS ++GD + F M V P+ T
Sbjct: 347 YSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFT 406
Query: 461 FLSVL 465
+ ++L
Sbjct: 407 YSAML 411
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 313 FDELSCREI-ISWNALISGYAQNGLSLAAVQAFF-----GVIKESKPNAYTFGSVLNAVG 366
DE+ R+ + N ++ YA+ G+ + F GV+ +S T VL A
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSA----TLSCVLKACR 110
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ D L G++ H +K G D + G++L+DMY K GS+ E VF +K+
Sbjct: 111 SVPDRVL--GEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVT 168
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
WT++++ A + VM F M +G+ P+ TF SVL+ G + G+ + +
Sbjct: 169 WTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSV 228
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
K + S + +++M + G +E+A+ +
Sbjct: 229 K-FGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 224/659 (33%), Positives = 364/659 (55%), Gaps = 35/659 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVF----- 55
+N+Y G + F+ ++ +I SWN+++S + + + MN + +F
Sbjct: 61 INLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG---KYHEAMNCVNQLFSMCGG 117
Query: 56 -----DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
D T+ L C+ + G ++H + K G + +V+V +L+ +YSR+G L
Sbjct: 118 GHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDV 174
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A +VF +MP KD SWNA++SG+ Q+G+ A+ L M +G+++D ++ S C
Sbjct: 175 AHKVFVDMPVKDVGSWNAMISGFCQNGN-AAGALGVLNRMKGEGVKMDTITVASILPVCA 233
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
++ G IH +K G + V V N L++ YSK DA VF +M R+++SW +
Sbjct: 234 QSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNS 293
Query: 231 MISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I+ ++ A+ FK M+L G+ P+ +T + L S + + R I G I+
Sbjct: 294 IIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRRE 353
Query: 286 FLSEPSVC-NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
+L + V N L+ MYA+ M + VFD+L ++ ISWN L++GY QNGL+ A+ A+
Sbjct: 354 WLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY 413
Query: 345 --FGVIKESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
+++ PN T+ S++ A VGA L+ G + H+ +IK L D V + L+
Sbjct: 414 NMMEECRDTIPNQGTWVSIIPAYSHVGA-----LQQGMKIHAKLIKNSLYLDVFVATCLI 468
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
D+YGK G + ++ +F E + W AII++L HG E + FK+M + V+ D I
Sbjct: 469 DLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHI 528
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
TF+S+L+ C +G++ +G+ FD M K+Y I+PS HY CMVD+LGR G LE+A ELV
Sbjct: 529 TFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRN 588
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P P S+ +LL AC+I+GN E+G +D L++++ G YVL+SN+YA WE V
Sbjct: 589 MPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGV 648
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+R + +G+RK G+S VG F +G+ THP+ EIY+ + L ++MK L
Sbjct: 649 IKVRSLARDRGLRKTPGWSSVVVG--SKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSL 705
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 239/481 (49%), Gaps = 26/481 (5%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
+LH+L++ FG + + LI +Y G + +R FD + K+ SWN+I+S Y + G
Sbjct: 40 KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99
Query: 138 DY--GVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
Y + + L M G LR D +F AC +L GK++H KMG+ V
Sbjct: 100 KYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVFKMGFEDDV 156
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLD 249
V L+ YS+ V A+KVF M ++V SW MIS N A+ + M+ +
Sbjct: 157 FVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGE 216
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
GV + +T ++ + + V G +IH +K S+ V N LI MY++F +QD+
Sbjct: 217 GVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDA 276
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAA 368
+ VFD++ R+++SWN++I+ Y QN A++ F G+ + +P+ T S+ +
Sbjct: 277 QMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQL 336
Query: 369 EDISLKHGQRCHSHII-----KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
D QR I+ + LD D ++G+AL++MY K G + + VF++ K
Sbjct: 337 SD------QRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDT 390
Query: 424 FAWTAIISALARHGDYESVMNQFKEMEN-KGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
+W +++ ++G ++ + ME + P+ T++S++ G + +G +
Sbjct: 391 ISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
++K+ + +C++D+ G+ GRLE+A L +IP + +++ + IHG
Sbjct: 451 KLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVP-WNAIIASLGIHGRG 508
Query: 543 E 543
E
Sbjct: 509 E 509
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 338 LAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
L +V F+ S F ++ N+ +++ ++ H+ ++ G + ++ +
Sbjct: 5 LKSVSKFYKSATTSLHKDADFNALFNSC-----VNVNATKKLHALLLVFGKSQNIVLSTK 59
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM---NQFKEMENKG- 453
L+++Y G I S+ F+ +K+ F+W +IISA R G Y M NQ M G
Sbjct: 60 LINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGH 119
Query: 454 VRPDSITFLSVLTVC 468
+RPD TF +L C
Sbjct: 120 LRPDFYTFPPILKAC 134
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/651 (33%), Positives = 363/651 (55%), Gaps = 23/651 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIG-VVFD 56
+N+Y G + C F+ + D+ +WN+++S + + +A+ ++ L+ + D
Sbjct: 158 VNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPD 217
Query: 57 AVTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T+ L C G L G ++H K G V+V +LI MYSR+G AR +F
Sbjct: 218 FYTFPPVLKAC----GTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 273
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D+MP +D SWNA++SG Q+G+ +A+ L EM +G++++ V+ S C ++
Sbjct: 274 DDMPFRDMGSWNAMISGLIQNGN-AAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDI 332
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
IH IK G + V N L++ Y+K DA K F++M +V+SW ++I+
Sbjct: 333 STAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAY 392
Query: 235 -NREDAVS---LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+D V+ F +M+L+G P+ +T + L ++ K R +HG ++ +L E
Sbjct: 393 EQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMED 452
Query: 291 SVC-NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGV 347
V N ++ MYA+ + + KVF+ + +++ISWN LI+GYAQNGL+ A++ +
Sbjct: 453 VVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEE 512
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
KE PN T+ S+L A A +L+ G R H +IK L D V + L+D+YGK G
Sbjct: 513 CKEIIPNQGTWVSILPAY--AHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGR 570
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ +F + ++S W AIIS HG E + F EM ++GV+PD +TF+S+L+
Sbjct: 571 LVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSA 630
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C +G + +G+ F ++++Y I+PS HY CMVD+LGR G LE A + +P P S
Sbjct: 631 CSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDAS 689
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+ +LLGACRIHGN+E+G+ +D L +++ G YVL+SN+YA G WE V +R +
Sbjct: 690 IWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLAR 749
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+G++K G+S +V + F +G+ +HP+ +EIY L ++MK L
Sbjct: 750 ERGLKKTPGWSTIEVN--RKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSL 798
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 148/531 (27%), Positives = 268/531 (50%), Gaps = 29/531 (5%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
F LH+L+V G +++ L+ +Y+ G + +R FD++P KD +WN+++S Y
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193
Query: 135 QDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
+G + EAI +++ +R D +F ACG L G++IH + K+G+ +
Sbjct: 194 HNGHFH-EAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRRIHCWAFKLGFQWN 249
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRL 248
V V L+ YS+ TG A +F M R++ SW MIS N A+ + EMRL
Sbjct: 250 VFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 309
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
+G+ N VT + ++ + +IH IK + V N LI MYA+F +++D
Sbjct: 310 EGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLED 369
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVG 366
+ K F ++ +++SWN++I+ Y QN + A FF ++ + +P+ T S+ + V
Sbjct: 370 ARKAFQQMFITDVVSWNSIIAAYEQNDDPVTA-HGFFVKMQLNGFQPDLLTLVSLASIVA 428
Query: 367 AAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ D K+ + H I++ G L D ++G+A++DMY K G + + +VF K +
Sbjct: 429 QSRDC--KNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVIS 486
Query: 426 WTAIISALARHGDYESVMNQFKEMEN-KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W +I+ A++G + +K ME K + P+ T++S+L G + +G + +
Sbjct: 487 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRV 546
Query: 485 LK-DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR-IHGNV 542
+K + H++ +C++D+ G+ GRL +A L Q+P SV + + +C IHG+
Sbjct: 547 IKTNLHLDVFVA--TCLIDVYGKCGRLVDAMSLFYQVPQES--SVTWNAIISCHGIHGHA 602
Query: 543 EMGERIADALMK--MEPAGSGSYVLMSNL----YAEKGDWEMVAILRKGMK 587
E ++ ++ ++P L+S + E+G W + G+K
Sbjct: 603 EKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIK 653
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/659 (33%), Positives = 364/659 (55%), Gaps = 35/659 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVF----- 55
+N+Y G + F+ ++ +I SWN+++S + + + MN + +F
Sbjct: 61 INLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG---KYHEAMNCVNQLFSMCGG 117
Query: 56 -----DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
D T+ L C+ + G ++H + K G + +V+V +L+ +YSR+G L
Sbjct: 118 GHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDV 174
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A +VF +MP KD SWNA++SG+ Q+G+ A+ L M +G+++D ++ S C
Sbjct: 175 AHKVFVDMPVKDVGSWNAMISGFCQNGN-AAGALGVLNRMKGEGVKMDTITVASILPVCA 233
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
++ G IH +K G + V V N L++ YSK DA VF +M R+++SW +
Sbjct: 234 QSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNS 293
Query: 231 MISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I+ ++ A+ FK M+L G+ P+ +T + L S + + R I G I+
Sbjct: 294 IIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRRE 353
Query: 286 FLSEPSVC-NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
+L + V N L+ MYA+ M + VFD+L ++ ISWN L++GY QNGL+ A+ A+
Sbjct: 354 WLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY 413
Query: 345 --FGVIKESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
+++ PN T+ S++ A VGA L+ G + H+ +IK L D V + L+
Sbjct: 414 NMMEECRDTIPNQGTWVSIIPAYSHVGA-----LQQGMKIHAKLIKNSLYLDVFVATCLI 468
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
D+YGK G + ++ +F E + W AII++L HG E + FK+M + V+ D I
Sbjct: 469 DLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHI 528
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
TF+S+L+ C +G++ +G+ FD M K+Y I+PS HY CMVD+LGR G LE+A ELV
Sbjct: 529 TFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRN 588
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P P S+ +LL AC+I+GN E+G +D L++++ G YVL+SN+YA WE V
Sbjct: 589 MPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGV 648
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+R + +G+RK G+S VG F +G+ THP+ EIY+ + L ++MK L
Sbjct: 649 IKVRSLARDRGLRKTPGWSSVVVG--SKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSL 705
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 239/481 (49%), Gaps = 26/481 (5%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
+LH+L++ FG + + LI +Y G + +R FD + K+ SWN+I+S Y + G
Sbjct: 40 KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99
Query: 138 DY--GVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
Y + + L M G LR D +F AC +L GK++H KMG+ V
Sbjct: 100 KYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVFKMGFEDDV 156
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLD 249
V L+ YS+ V A+KVF M ++V SW MIS N A+ + M+ +
Sbjct: 157 FVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGE 216
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
GV + +T ++ + + V G +IH +K S+ V N LI MY++F +QD+
Sbjct: 217 GVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDA 276
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAA 368
+ VFD++ R+++SWN++I+ Y QN A++ F G+ + +P+ T S+ +
Sbjct: 277 QMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQL 336
Query: 369 EDISLKHGQRCHSHII-----KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
D QR I+ + LD D ++G+AL++MY K G + + VF++ K
Sbjct: 337 SD------QRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDT 390
Query: 424 FAWTAIISALARHGDYESVMNQFKEMEN-KGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
+W +++ ++G ++ + ME + P+ T++S++ G + +G +
Sbjct: 391 ISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
++K+ + +C++D+ G+ GRLE+A L +IP + +++ + IHG
Sbjct: 451 KLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVP-WNAIIASLGIHGRG 508
Query: 543 E 543
E
Sbjct: 509 E 509
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 338 LAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
L +V F+ S F ++ N+ +++ ++ H+ ++ G + ++ +
Sbjct: 5 LKSVSKFYKSATTSLHKDADFNALFNSC-----VNVNATKKLHALLLVFGKSQNIVLSTK 59
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM---NQFKEMENKG- 453
L+++Y G I S+ F+ +K+ F+W +IISA R G Y M NQ M G
Sbjct: 60 LINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGH 119
Query: 454 VRPDSITFLSVLTVC 468
+RPD TF +L C
Sbjct: 120 LRPDFYTFPPILKAC 134
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/646 (32%), Positives = 354/646 (54%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY K + D +L +F+ L + VSW+ +++G ++D + L M +GV
Sbjct: 223 LGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQ 282
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y++ C G +LHS +K S++ VG A + MY++ GR+ +A++V
Sbjct: 283 SIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSS 342
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP S+NAI+ GY + D G +A+ + +++ GL D ++ + A +AC +
Sbjct: 343 MPKCSLQSYNAIIVGYAR-SDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLE 401
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+Q+HG+++K +++ V N ++ Y KC+ +A+ +F M R+ +SW +I+
Sbjct: 402 GRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQ 461
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N E+ ++ F M + P+D T+ ++ A + + G IH IK+ + V
Sbjct: 462 NGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFV 521
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-- 350
L+ MY + ++ ++K+ D + ++SWNA+ISG++ S A FF + E
Sbjct: 522 GAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDA-HKFFSRMLEMG 580
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ +T+ +VL+ + L G++ H+ IIK L SD + S L+DMY K G++ +
Sbjct: 581 VNPDNFTYAAVLDTCANLATVGL--GKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQD 638
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
SQ +F + + W A++ A HG E + F+ M+ V+P+ TF+SVL C
Sbjct: 639 SQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAH 698
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ KG H FD ML +Y ++P +HYSCMVD+LGR GR++EA LV ++P + +
Sbjct: 699 MGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWR 758
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL C+IHGNVE+ E+ AL++++P S + VL+SN+YA+ G W V+ +RK M+
Sbjct: 759 NLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNK 818
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++KE G SW ++ D +H F GD HPR EEIY L EM+
Sbjct: 819 LKKEPGCSWIELK--DEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQ 862
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 279/529 (52%), Gaps = 17/529 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTY 60
Y G+ D A F + D+VSWN+V+SGF ++ + ++ L M GV FD +
Sbjct: 125 YASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASL 184
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ L C E G+Q+H L+VKFG D +V G+AL+ MY++ RL ++ VF E+P
Sbjct: 185 AVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPE 244
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
K+ VSW+A+++G Q+ D VE + EM G+ + + S +C L LGK+
Sbjct: 245 KNWVSWSAMIAGCVQN-DRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKE 303
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNRED- 238
+H ++K +G+ + VG + Y+KC DA KV M ++ S+ +I R D
Sbjct: 304 LHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDR 363
Query: 239 ---AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
A+ F+ + G+ +++T G ++A + EGR +HGL +K+ +S V N
Sbjct: 364 GFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANA 423
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
++ MY + +++ ++ +FD + R+ +SWNA+I+ QNG + F +I +P+
Sbjct: 424 ILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPD 483
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
+T+GSVL A + +L G H+ IIK G+ D VG+AL+DMY K G I ++ ++
Sbjct: 484 DFTYGSVLKACAGRQ--ALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKI 541
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
+ T++K+ +W AIIS + E F M GV PD+ T+ +VL C +
Sbjct: 542 HDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATV 601
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIP 521
G+ + ++K E D Y C +VDM + G +++++ + + P
Sbjct: 602 GLGKQIHAQIIKQ---ELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAP 647
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 240/497 (48%), Gaps = 45/497 (9%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+S C G Q H+ ++ G + +V N L+ MY + L A +VFD+M
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 119 PNKDSVSWNAILSGYTQDGDYGV------------------------------EAILALI 148
+D VS+N+I+SGY G+ + ++I +
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
EM R G+ D S ACG + ++G Q+HG+ +K G+ V G+ L+ Y+KC+
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCK 230
Query: 209 VTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIH 263
D+ VF + ++N +SW+ MI+ + + + LFKEM+ GV + + L
Sbjct: 231 RLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFR 290
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
+ + + ++ G+ +H +K+ F S+ V + MYA+ M D++KV + + S
Sbjct: 291 SCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQS 350
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAE-DISLKHGQRCHS 381
+NA+I GYA++ A+++F ++K + T LNA + D+ G++ H
Sbjct: 351 YNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDL---EGRQVHG 407
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
+K S+ V +A+LDMYGK ++ E+ +F+ + + +W AII+A ++G+ E
Sbjct: 408 LAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEE 467
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SC 499
+ F M + + PD T+ SVL C ++ G + ++K D + +
Sbjct: 468 TLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKS---GMGFDSFVGAA 524
Query: 500 MVDMLGRVGRLEEAEEL 516
+VDM + G +E+A+++
Sbjct: 525 LVDMYCKCGMIEKADKI 541
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/653 (31%), Positives = 368/653 (56%), Gaps = 14/653 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ +Y + G F A +F ++ + D V++NT++SG + + AL M G+ D
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT S+ L+ C G QLHS + K G+ S+ + +L+ +Y + G + A +F+
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ V WN +L + Q D ++ +M G+R + ++ C + ++L
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLA-KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL 363
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MN 235
G+QIH +S+K G+ + + V VL+ YSK A +V + +++V+SWT+MI+ +
Sbjct: 364 GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQ 423
Query: 236 RE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E DA++ FKEM+ G+ P+++ I + N +++G IH + + + S+
Sbjct: 424 HECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI 483
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ +YAR ++++ F+E+ ++ I+ N L+SG+AQ+GL A++ F + +
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
K N +TF S L+A +A +K G++ H+ +IK G + VG+AL+ +YGK GS ++
Sbjct: 544 KHNVFTFVSALSA--SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDA 601
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ F+E E++E +W II++ ++HG ++ F +M+ +G++P+ +TF+ VL C
Sbjct: 602 KMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHV 661
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G F SM +Y I P PDHY+C++D+ GR G+L+ A++ + ++P V ++
Sbjct: 662 GLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL AC++H N+E+GE A L+++EP S SYVL+SN YA W +RK M+ +GV
Sbjct: 722 LLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGV 781
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
RKE G SW +V ++ +H F GD HP +E+IY + + + K+E+
Sbjct: 782 RKEPGRSWIEVKNV--VHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEK 832
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 274/549 (49%), Gaps = 14/549 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K+G A +F L+ D VSW +LSG+ ++ ++AL +M+ GVV
Sbjct: 84 IDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTP 143
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS C E F G +H+ K G SE++VGNA+IT+Y R G A RVF +
Sbjct: 144 YVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCD 203
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP++D+V++N ++SG+ Q G +G A+ EM GL D V+ +S +AC +L+
Sbjct: 204 MPHRDTVTFNTLISGHAQCG-HGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G Q+H K G + + L+ Y KC A +F NV+ W M+
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + LF +M+ G+ PN T+ ++ + + G IH L +KT F S+ V
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
LI MY+++ ++ + +V + L ++++SW ++I+GY Q+ A+ AF + K
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 353 -PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P+ S ++ G A +++ G + H+ I G D + +AL+++Y + G I E+
Sbjct: 443 WPDNIGLASAIS--GCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREA 500
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
F E + K ++S A+ G +E + F M+ GV+ + TF+S L+
Sbjct: 501 FSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANL 560
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
I +G+ + ++K H + + ++ + G+ G E+A+ ++ +S +
Sbjct: 561 AEIKQGKQIHARVIKTGH-SFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNT 618
Query: 532 LLGACRIHG 540
++ +C HG
Sbjct: 619 IITSCSQHG 627
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 229/449 (51%), Gaps = 24/449 (5%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
++H+ V GL VGN LI +YS+ G ++ ARRVF+E+ +D+VSW A+LSGY Q+G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
G EA+ +M R G+ +S S+C + G+ IH K G+ + + VG
Sbjct: 123 -LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVG 181
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVC 252
N +++ Y +C A +VF M R+ +++ T+IS + E A+ +F+EM+ G+
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241
Query: 253 PNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ VT L+ A S+G+L K G +H K S+ + L+ +Y + ++ +
Sbjct: 242 PDCVTISSLLAACASLGDLQK-GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAE 369
+F+ ++ WN ++ + Q LA F ++ + +PN +T+ +L
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQIN-DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+I L G++ HS +K G +SD V L+DMY K G + +++RV +EK +WT++
Sbjct: 360 EIDL--GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSM 417
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG-----RNGMIHKGRHLFDSM 484
I+ +H + + FKEM+ G+ PD+I S ++ C R G+ R
Sbjct: 418 IAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGY 477
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
D I ++ +V++ R GR+ EA
Sbjct: 478 SGDVSI------WNALVNLYARCGRIREA 500
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 199/410 (48%), Gaps = 17/410 (4%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASAC-GHEKNL 175
M + + S L+G+ D +L+L + R+ L + F A AC G+ +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPA--KVLSLFADKARQHGGLGPLDFACALRACRGNGRRW 58
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
++ +IH ++ G G + VGN+L+ YSK + A +VF + R+ +SW M+S
Sbjct: 59 QVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118
Query: 236 R-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E+A+ L+++M GV P ++ + + L +GR+IH K F SE
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
V N +IT+Y R S + +E+VF ++ R+ +++N LISG+AQ G A++ F +
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ T S+L A + D L+ G + HS++ K G+ SD I+ +LLD+Y K G +
Sbjct: 239 GLSPDCVTISSLLAACASLGD--LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVE 296
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ +FN + + W ++ A + D F +M+ G+RP+ T+ +L C
Sbjct: 297 TALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCT 356
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELV 517
I G + +K D Y ++DM + G LE+A ++
Sbjct: 357 CTREIDLGEQIHSLSVKTGF---ESDMYVSGVLIDMYSKYGWLEKARRVL 403
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/657 (32%), Positives = 365/657 (55%), Gaps = 18/657 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVT 59
MY K G + +F+ L+ I WN ++S + S ++++ +M +G+ ++ T
Sbjct: 194 MYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYT 253
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+S+ L G Q+H LI K G +S V N+LI+ Y ++ A+++FDE+
Sbjct: 254 FSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELT 313
Query: 120 NKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
++D +SWN+++SGY ++G D G+E I+M+ G+ +D + + AC + L L
Sbjct: 314 DRDVISWNSMISGYVKNGLDDRGIEI---FIKMLVFGVDIDLATMVNVFVACANIGTLLL 370
Query: 178 GKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MN 235
GK +H SIK V N L+ YSKC A +VF RM ++ V+SWT+MI+
Sbjct: 371 GKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYV 430
Query: 236 RED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
RE A+ LF EM+ GV P+ +++A +I +K G+++H + N +
Sbjct: 431 REGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSF 490
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L MYA+ SM+D+ VF + +++ISWN +I GY +N L A+ F + +ES
Sbjct: 491 VSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES 550
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+ T +L A A +L G+ H + ++ G D V +A++DMY K G + +
Sbjct: 551 KPDGTTVACILPA--CASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLA 608
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ +F+ K +WT +I+ HG +N F +M G+ PD ++F+S+L C +
Sbjct: 609 RSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHS 668
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G +F+ M K+ IEP+ +HY+CMVD+L R G L +A + + +P P ++ +
Sbjct: 669 GLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGA 728
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL CRIH +V++ E++A+ + ++EP +G YVL++N+YAE WE V LRK + +G+
Sbjct: 729 LLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGL 788
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+K G SW ++ ++ F +GD + P++++I + + L S+MK + A AL
Sbjct: 789 KKNPGCSWIEIK--GKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYAL 843
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 246/481 (51%), Gaps = 26/481 (5%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
FD Y + L C + + G ++ S+I G+ + +G L+ MY + G L E R V
Sbjct: 148 FDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMV 207
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD++ WN ++S Y+ G+YG E+I +M+ G++ + +F+S
Sbjct: 208 FDKLSESKIFLWNLMISEYSGSGNYG-ESINLFKQMLELGIKPNSYTFSSILKCFAAVAR 266
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
+E G+Q+HG+ K+G+ ++ +V N L+S Y A K+F + DR+VISW +MIS
Sbjct: 267 VEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISG 326
Query: 235 NRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLS 288
++ + +F +M + GV + T + + A + IG L+ G+++H IK L
Sbjct: 327 YVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLL-GKVLHSYSIKAATLD 385
Query: 289 -EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--- 344
E N L+ MY++ + + +VF+ + + ++SW ++I+GY + GLS A++ F
Sbjct: 386 REVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEM 445
Query: 345 --FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
GV+ P+ Y S+LNA A + +LK G+ H +I + L+++ V +AL DMY
Sbjct: 446 KSRGVV----PDVYAVTSILNA--CAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMY 499
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K GS+ ++ VF+ ++K +W +I ++ + F EM+ + +PD T
Sbjct: 500 AKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVA 558
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
+L C + KGR + L++ + S D Y + +VDM + G L A L I
Sbjct: 559 CILPACASLAALDKGREIHGYALRNGY---SEDKYVTNAVVDMYVKCGLLVLARSLFDMI 615
Query: 521 P 521
P
Sbjct: 616 P 616
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 211/416 (50%), Gaps = 20/416 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G + A+ +F ++ +VSW ++++G+ + SD A+ M GVV D
Sbjct: 395 LDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDV 454
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ L+ C + G +H I + L++ +V NAL MY++ G + +A VF
Sbjct: 455 YAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSH 514
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD +SWN ++ GYT++ EA+ EM R+ + D + AC L+
Sbjct: 515 MKKKDVISWNTMIGGYTKNS-LPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDK 572
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
G++IHG +++ GY V N ++ Y KC + A +F + +++++SWT MI+ M
Sbjct: 573 GREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGM 632
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +A++ F +MR+ G+ P++V+FI +++A S L+ EG I + +K EP++
Sbjct: 633 HGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNI-MKKECQIEPNL 691
Query: 293 CN--CLITMYARFESMQDSEKVFDELSCR-EIISWNALISG-YAQNGLSLAAVQAFFGVI 348
+ C++ + AR ++ + K + + + W AL+ G + + LA A I
Sbjct: 692 EHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVA--ERI 749
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
E +P + VL A AE + Q+ I + GL +P G + +++ GK
Sbjct: 750 FELEPENTGY-YVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNP--GCSWIEIKGK 802
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/656 (34%), Positives = 372/656 (56%), Gaps = 25/656 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNL-NNPDIVSWNTVLSGFEKSDDALSFALRMNLI-----GVV 54
+++Y K GQ++KA IF + ++ D++SW+ ++S F +++ + F + + G
Sbjct: 108 ISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCF--ANNNMGFRALLTFVDMIENGYY 165
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSR-WGRLVEAR 112
+ ++ A C E G + +VK G L S+V VG LI M+ + G LV A
Sbjct: 166 PNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAF 225
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+VF++MP +++V+W +++ Q G Y EAI +EM+ G D + + SAC +
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFG-YAGEAIDLFLEMILSGYEPDRFTLSGVISACANM 284
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD---ANKVFRRMHDRNVISWT 229
+ L LG+Q+H +I+ G VG L++ Y+KC V G A K+F ++ D NV SWT
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT 344
Query: 230 TMISMN------REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
MI+ E+A+ LF+ M L V PN TF + A + ++ G + +K
Sbjct: 345 AMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK 404
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
F S V N LI+MYAR + D+ K FD L + +IS+N +I YA+N S A++
Sbjct: 405 LGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALEL 464
Query: 344 FFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
F + + +A+TF S+L+ GAA ++ G++ H+ +IK GL + V +AL+ MY
Sbjct: 465 FNEIEDQGMGASAFTFASLLS--GAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMY 522
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
+ G+I + +VF + ++++ +WT+II+ A+HG + F +M +GVRP+ +T++
Sbjct: 523 SRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYI 582
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+VL+ C G++++G F SM ++ + P +HY+CMVD+LGR G L EA + + +P
Sbjct: 583 AVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPY 642
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
V ++ LGACR+HGN+E+G+ A +++ EP +Y+L+SNLYA W+ V+ +
Sbjct: 643 KADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNI 702
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
RK MK K + KE G SW +V + +H F GD +HP++ EIY + L ++K L
Sbjct: 703 RKAMKEKNLIKEAGCSWVEVE--NKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKL 756
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 244/473 (51%), Gaps = 21/473 (4%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D TYS L C+ F G +H + + L + N+LI++YS+ G+ +A +F
Sbjct: 65 DLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIF 124
Query: 116 DEM-PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
M ++D +SW+A++S + + + G A+L ++M+ G + F +A AC +
Sbjct: 125 QLMGSSRDLISWSAMVSCFANN-NMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEF 183
Query: 175 LELGKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGD---ANKVFRRMHDRNVISWTT 230
+ +G I G +K GY + V VG L+ + K GD A KVF +M +RN ++WT
Sbjct: 184 VSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGR--GDLVSAFKVFEKMPERNAVTWTL 241
Query: 231 MISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MI+ + +A+ LF EM L G P+ T G+I A + L+ G+ +H I+
Sbjct: 242 MITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHG 301
Query: 286 FLSEPSVCNCLITMYARFE---SMQDSEKVFDELSCREIISWNALISGYAQN-GLSLAAV 341
+ V CLI MYA+ SM + K+FD++ + SW A+I+GY Q G A+
Sbjct: 302 LTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEAL 361
Query: 342 QAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
F G+I PN +TF S L A A +L+ G++ +H +K+G S V ++L+
Sbjct: 362 DLFRGMILTHVIPNHFTFSSTLKA--CANLAALRIGEQVFTHAVKLGFSSVNCVANSLIS 419
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY + G I ++++ F+ EK+ ++ +I A A++ + E + F E+E++G+ + T
Sbjct: 420 MYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFT 479
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
F S+L+ G I KG + ++K ++ + + ++ M R G +E A
Sbjct: 480 FASLLSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALISMYSRCGNIESA 531
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/644 (32%), Positives = 362/644 (56%), Gaps = 16/644 (2%)
Query: 3 MYCKSGQFDKALCIFNN-LNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAV 58
MY G + IF++ L++ + WN ++S + K D ++ +M +G+ ++
Sbjct: 495 MYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSY 554
Query: 59 TYSTALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+S L C G + + +H + K G S V N+LI Y + G + A ++FDE
Sbjct: 555 TFSCILK-CFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDE 613
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++D VSWN+++SG +G + A+ ++M+ + +D + ++ +AC + +L L
Sbjct: 614 LGDRDVVSWNSMISGCVMNG-FSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSL 672
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-R 236
G+ +HG +K + V N L+ YSKC DA + F +M + V+SWT++I+ R
Sbjct: 673 GRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVR 732
Query: 237 E----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E DA+ LF EM GV P+ + ++HA + GN + +GR +H K N V
Sbjct: 733 EGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPV 792
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ MYA+ SM+++ VF ++ ++I+SWN +I GY++N L A++ F + KES+
Sbjct: 793 SNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESR 852
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ T +L A G+ +L+ G+ H I++ G S+ V +AL+DMY K GS+ ++
Sbjct: 853 PDGITMACLLPACGSLA--ALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHAR 910
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F+ EK WT +IS HG + F++M G++PD ITF S+L C +G
Sbjct: 911 LLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSG 970
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++++G F+SM+ + ++EP +HY+CMVD+L R G L +A L+ +P P ++ +L
Sbjct: 971 LLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGAL 1030
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L CRIH +VE+ E++A+ + ++EP +G YVL++N+YAE WE V LR+ + +G++
Sbjct: 1031 LCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLK 1090
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
K G SW +V F S D HP+++ I+ + L +MK
Sbjct: 1091 KSPGCSWIEVQ--GKFTTFVSADTAHPQAKSIFSLLNNLRIKMK 1132
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 256/515 (49%), Gaps = 22/515 (4%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D YS+ L C +H+ G +HS+I G+ E +G L+ MY G L E RR+
Sbjct: 449 LDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRI 508
Query: 115 FDEMPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
FD + + + V WN ++S Y + GDY E+I +M + G+ + +F+
Sbjct: 509 FDHILSDNKVFLWNLMMSEYAKIGDYR-ESIYLFKKMQKLGITGNSYTFSCILKCFATLG 567
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+ K+IHG K+G+G++ +V N L++TY K A+K+F + DR+V+SW +MIS
Sbjct: 568 RVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMIS 627
Query: 234 ---MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
MN A+ F +M + V + T + + A + + GR +HG +K F
Sbjct: 628 GCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSR 687
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
E N L+ MY++ ++ D+ + F+++ + ++SW +LI+ Y + GL A++ F+ +
Sbjct: 688 EVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEM- 746
Query: 349 KESK---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
ESK P+ Y+ SVL+A SL G+ H++I K + V +AL+DMY K
Sbjct: 747 -ESKGVSPDVYSMTSVLHACACGN--SLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKC 803
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GS+ E+ VF++ K +W +I +++ + F EM+ K RPD IT +L
Sbjct: 804 GSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQ-KESRPDGITMACLL 862
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS-CMVDMLGRVGRLEEAEELVGQIPGGP 524
CG + GR + +L++ + S H + ++DM + G L A L IP
Sbjct: 863 PACGSLAALEIGRGIHGCILRNGY--SSELHVANALIDMYVKCGSLVHARLLFDMIP-EK 919
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
L ++ C +HG +G KM AG
Sbjct: 920 DLITWTVMISGCGMHG---LGNEAIATFQKMRIAG 951
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 198/402 (49%), Gaps = 13/402 (3%)
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSI 186
N + + + GD + + L+ M +K LD +++S C K L+ GK +H V
Sbjct: 422 NTKICKFCEVGD--LRNAVELLRMSQKS-ELDLNAYSSILQLCAEHKCLQEGKMVHSVIS 478
Query: 187 KMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR-MHDRNVISWTTMISM-----NREDAV 240
G +G L+ Y C + ++F + D V W M+S + +++
Sbjct: 479 SNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESI 538
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
LFK+M+ G+ N TF ++ + V E + IHG K F S +V N LI Y
Sbjct: 539 YLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATY 598
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
+ + + K+FDEL R+++SWN++ISG NG S +A++ F ++ +
Sbjct: 599 FKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRV--GVDLAT 656
Query: 361 VLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
++N+V A ++ SL G+ H +K + + + LLDMY K G++ ++ + F +
Sbjct: 657 LVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMG 716
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
+K+ +WT++I+A R G Y+ + F EME+KGV PD + SVL C + KGR
Sbjct: 717 QKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRD 776
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ + + K+ P + M DM + G +EEA + QIP
Sbjct: 777 VHNYIRKNNMALCLPVSNALM-DMYAKCGSMEEAYLVFSQIP 817
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 222/470 (47%), Gaps = 41/470 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + A+ F + +VSW ++++ + + DDA+ M GV D
Sbjct: 696 LDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDV 755
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ ++ L C G +H+ I K + + V NAL+ MY++ G + EA VF +
Sbjct: 756 YSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQ 815
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P KD VSWN ++ GY+++ EA L L M+K R D ++ ACG LE+
Sbjct: 816 IPVKDIVSWNTMIGGYSKNS-LPNEA-LKLFAEMQKESRPDGITMACLLPACGSLAALEI 873
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
G+ IHG ++ GY + + V N L+ Y KC A +F + ++++I+WT MIS M
Sbjct: 874 GRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGM 933
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEPS 291
+ +A++ F++MR+ G+ P+++TF +++A S L+ EG + + + N +
Sbjct: 934 HGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLE 993
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
C++ + AR ++ + + + + + + W AL+ G + A + V +
Sbjct: 994 HYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFEL 1053
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
NA + + N AE + ++ I K GL P G + +++ GK
Sbjct: 1054 EPDNAGYYVLLANIYAEAE--KWEEVKKLRERIGKRGLKKSP--GCSWIEVQGK------ 1103
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESV---MNQFK-EMENKGVRP 456
+T +SA H +S+ +N + +M+N+G P
Sbjct: 1104 ---------------FTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSP 1138
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/646 (32%), Positives = 360/646 (55%), Gaps = 18/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G + + +F + ++V+W ++L+G + + ++ RM G+ +
Sbjct: 142 VDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNP 201
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ LS G ++H+ VKFG S V+V N+L+ MY++ G + +A+ VF+
Sbjct: 202 FTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNW 261
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSWN +++G Q + +EA+ E ++ ++ + C + K L L
Sbjct: 262 METRDMVSWNTLMAGL-QLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLAL 320
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMISMNR 236
+Q+H +K G+ +V L YSKC DA +F RNV+SWT +IS
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCI 380
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ AV LF MR D V PN+ T+ ++ A S+ L + IH IKTN+ P
Sbjct: 381 QNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA-SLSILPPQ---IHAQVIKTNYQHIPF 436
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
V L+ Y++F S +D+ +F + +++++W+A++S +AQ G A F + I+
Sbjct: 437 VGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQG 496
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN +T SV++A A + G++ H+ IK V SAL+ MY ++G+I
Sbjct: 497 IKPNEFTISSVIDAC-ACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDS 555
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+Q VF ++ +W ++IS A+HG + F++ME G++ D +TFL+V+ C
Sbjct: 556 AQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTH 615
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
NG++ +G+ FDSM++D+ I P+ +HY+CMVD+ R G+L+E L+ +P G V +
Sbjct: 616 NGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWR 675
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGACR+H NVE+G+ AD L+ +EP S +YVL+SN+YA G W+ +RK M +
Sbjct: 676 TLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRK 735
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V+KE G SW + + +H F + D +HP S++IY+ + + + +K
Sbjct: 736 VKKEAGCSWIQIK--NKVHSFIAFDKSHPMSDQIYKKLKVIITRLK 779
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/474 (30%), Positives = 235/474 (49%), Gaps = 21/474 (4%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDS-EVYVGNALITMYSRWGRLVE 110
GV+ D+ T S L C + G QLH L VK G D EV G +L+ MY + G + E
Sbjct: 94 GVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCE 153
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
VF+ MP K+ V+W ++L+G E + M +G+ + +F S SA
Sbjct: 154 GIEVFEGMPKKNVVTWTSLLTGCAH-AQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVA 212
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ L+LG+++H S+K G + V V N LM+ Y+KC + DA VF M R+++SW T
Sbjct: 213 SQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNT 272
Query: 231 MIS---MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+++ +N +A+ LF E R T+ +I + + R +H +K
Sbjct: 273 LMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHG 332
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNG-LSLAAVQA 343
F +V L Y++ + D+ +F + R ++SW A+ISG QNG + LA V
Sbjct: 333 FHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVV-- 390
Query: 344 FFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F ++E + PN +T+ ++L A +S+ Q H+ +IK P VG+ALL
Sbjct: 391 LFSRMREDRVMPNEFTYSAMLKA-----SLSILPPQ-IHAQVIKTNYQHIPFVGTALLAS 444
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K GS ++ +F ++K AW+A++S A+ GD E F +M +G++P+ T
Sbjct: 445 YSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTI 504
Query: 462 LSVLTVCG-RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
SV+ C + + +GR F ++ Y + S +V M R G ++ A+
Sbjct: 505 SSVIDACACPSAGVDQGRQ-FHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQ 557
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 183/364 (50%), Gaps = 12/364 (3%)
Query: 111 ARRVFDEMPNKDS-VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
AR DE+P +D+ V N +L Y + G +E + R G+ +D + + AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRG-MVLEVLDQFSVARRGGVLVDSATLSCVLKAC 109
Query: 170 GHEKNLELGKQIHGVSIKMGYGT-HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
+ LG+Q+H + +K G+ VS G L+ Y KC + +VF M +NV++W
Sbjct: 110 RSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169
Query: 229 TTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
T++++ + ++LF MR +G+ PN TF ++ A++ + G+ +H +K
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
S VCN L+ MYA+ ++D++ VF+ + R+++SWN L++G N L A+Q
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289
Query: 344 FF-GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
F K T+ +V+ + ++L ++ HS ++K G V +AL D Y
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLAL--ARQLHSCVLKHGFHLTGNVMTALADAY 347
Query: 403 GKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
K G + ++ +F+ T ++ +WTAIIS ++GD + F M V P+ T+
Sbjct: 348 SKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTY 407
Query: 462 LSVL 465
++L
Sbjct: 408 SAML 411
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 313 FDELSCREI-ISWNALISGYAQNGLSLAAVQAFF-----GVIKESKPNAYTFGSVLNAVG 366
DE+ R+ + N ++ YA+ G+ L + F GV+ +S T VL A
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSA----TLSCVLKACR 110
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ D L G++ H +K G D + G++L+DMY K GS+ E VF +K+
Sbjct: 111 SVPDRVL--GEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVT 168
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
WT++++ A + VM F M +G+ P+ TF SVL+ G + G+ + +
Sbjct: 169 WTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSV 228
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
K + S + +++M + G +E+A+ +
Sbjct: 229 K-FGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/579 (34%), Positives = 331/579 (57%), Gaps = 11/579 (1%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
G++ D+ Y L CL + + Q+H I+K ++ +V N L+ +Y GRL EA
Sbjct: 23 GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEA 82
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
R VFD + K SWNA+++GY + + +A+ EM +G++ + ++ AC
Sbjct: 83 RCVFDALVKKSGASWNAMIAGYVEH-KHAEDAMRLFREMCHEGVQPNAGTYMIILKACAS 141
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
L+ GK++H G + V VG L+ Y KC +A ++F + + ++ISWT M
Sbjct: 142 LSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVM 201
Query: 232 I-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I S N ++A L +M +G PN +T++ +++A + +K + +H +
Sbjct: 202 IGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGL 261
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ V L+ MYA+ S+ D+ VFD + R+++SWN +I +A++G A F
Sbjct: 262 ELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQ 321
Query: 347 VIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ E KP+A F S+LNA +A +L+ ++ H H + GL+ D VG+AL+ MY K
Sbjct: 322 MQTEGCKPDAIMFLSILNACASAG--ALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKS 379
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GSI +++ VF+ + ++ +W A+IS LA+HG + + F+ M GV+PD +TF++VL
Sbjct: 380 GSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVL 439
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ +GR + +M + Y IEP H +CMVD+LGR GRL EA+ + + P
Sbjct: 440 SACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPD 499
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ +LLG+CR +GNVE+GE +A +K++P + +YVL+SN+YAE G W+MV+ +R
Sbjct: 500 EATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTM 559
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
M+ +G+RKE G SW +V + +H F D++HP +EI
Sbjct: 560 MRERGIRKEPGRSWIEVD--NKIHDFLVADSSHPECKEI 596
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 241/451 (53%), Gaps = 14/451 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+++Y + G+ +A C+F+ L SWN +++G+ + ++DA+ M GV +A
Sbjct: 70 LHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNA 129
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY L C +G ++H+ I GL+S+V VG AL+ MY + G + EARR+FD
Sbjct: 130 GTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDN 189
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ N D +SW ++ Y Q G+ G EA +++M ++G + + +++ S +AC E L+
Sbjct: 190 LMNHDIISWTVMIGAYAQSGN-GKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKW 248
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
K++H ++ G V VG L+ Y+K DA VF RM R+V+SW MI E
Sbjct: 249 VKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAE 308
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A LF +M+ +G P+ + F+ +++A + ++ + IH + + + V
Sbjct: 309 HGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRV 368
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
L+ MY++ S+ D+ VFD + R ++SWNA+ISG AQ+GL A++ F +
Sbjct: 369 GTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGV 428
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFE 410
KP+ TF +VL+A A + G+ + + +V G++ D + ++D+ G+ G + E
Sbjct: 429 KPDRVTFVAVLSACSHAGLVD--EGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLME 486
Query: 411 SQR-VFNETQEKSEFAWTAIISALARHGDYE 440
++ + N + E W A++ + +G+ E
Sbjct: 487 AKLFIDNMAVDPDEATWGALLGSCRTYGNVE 517
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 194/367 (52%), Gaps = 18/367 (4%)
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
+ Q + EAI+ L+ +++GL D + C +K+L KQ+H IK
Sbjct: 2 HVQTANTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQ 61
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMR 247
+ V N L+ Y +C +A VF + ++ SW MI+ + EDA+ LF+EM
Sbjct: 62 NAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMC 121
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL-SEPSVCNCLITMYARFESM 306
+GV PN T++ ++ A + + +K G+ +H CI+ L S+ V L+ MY + S+
Sbjct: 122 HEGVQPNAGTYMIILKACASLSALKWGKEVHA-CIRHGGLESDVRVGTALLRMYGKCGSI 180
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV 365
++ ++FD L +IISW +I YAQ+G A + + +E KPNA T+ S+LNA
Sbjct: 181 NEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNA- 239
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
A + +LK +R H H + GL+ D VG+AL+ MY K GSI +++ VF+ + + +
Sbjct: 240 -CASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVS 298
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM------IHKGRH 479
W +I A A HG + F +M+ +G +PD+I FLS+L C G IH RH
Sbjct: 299 WNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIH--RH 356
Query: 480 LFDSMLK 486
DS L+
Sbjct: 357 ALDSGLE 363
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/651 (33%), Positives = 368/651 (56%), Gaps = 26/651 (3%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYS 61
C SG A +F+ +++ D V+WNT++SG+ S A M G++ DA T+
Sbjct: 47 CSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFG 106
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
+ L G Q+HSLIVK G + VY G+AL+ MY++ R+ +A VF +P +
Sbjct: 107 SILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRR 166
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
+SVSWNA+++G+ +GD+ A L M +G+RLD +F+ + +K +L Q+
Sbjct: 167 NSVSWNALIAGFVLEGDHDT-AFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQL 225
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR-RMHDRNVISWTTMISM-----N 235
H IK G +V N +++YS+C DA +VF + R++++W +M++
Sbjct: 226 HCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDR 285
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
+E A LF +M+ G P+ T+ +I A S + G+ +HGL IK +CN
Sbjct: 286 KETAFKLFLDMQQFGFEPDIYTYTTIISACSHKD---NGKSLHGLVIKRGLEQLVPICNA 342
Query: 296 LITMY--ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF----FGVIK 349
+I MY + SM+D+ VF + ++ +SWN++++G++Q G S A++ F F V+
Sbjct: 343 VIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVD 402
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ Y F +VL + ++ +L+ GQ+ H +K G +S+ V S+L+ MY K G I
Sbjct: 403 ---IDHYAFSAVLRS--CSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIE 457
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++++ F +T + S W +I+ A A+HG + + F +M +K V+ D ITF++ LT C
Sbjct: 458 DARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACS 517
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +GR+L SM DY I P +HY+C VD+ GR G L+EA+ L+ +P P V
Sbjct: 518 HIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVW 577
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LLGACR G++E+ ++A L+++EP +YV++SN+Y W+ A + + M+ +
Sbjct: 578 KTLLGACRACGDIELAAQVASHLLELEPEEHCTYVILSNMYGHLKRWDEKACMARLMRER 637
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNS 640
V+K G+SW +V + +H F + D H EEIY++ E L ++K+L+S
Sbjct: 638 KVKKVPGWSWIEVK--NEVHAFIADDRCHSHFEEIYQILEQLMEDIKWLDS 686
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 226/448 (50%), Gaps = 20/448 (4%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRW--GRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
H +K G +++Y N +++ Y+R G L A +FDEM ++D+V+WN ++SGY G
Sbjct: 22 HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSG 81
Query: 138 DYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G + L + M+ GL D +F S L++G+Q+H + +KMGY HV
Sbjct: 82 SLG--SAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYA 139
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGV 251
G+ L+ Y+KCE DA VF+ + RN +SW +I+ + + A L + M +GV
Sbjct: 140 GSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGV 199
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
+D TF L+ + K +H IK + +VCN IT Y++ S++D+E+
Sbjct: 200 RLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAER 259
Query: 312 VFD-ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAE 369
VFD + R++++WN++++ + + A + F + + +P+ YT+ ++++A +
Sbjct: 260 VFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKD 319
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY--GKRGSIFESQRVFNETQEKSEFAWT 427
+ G+ H +IK GL+ + +A++ MY S+ ++ VF+ + K +W
Sbjct: 320 N-----GKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWN 374
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
+I++ ++ G E+ + F M V D F +VL C + G+ + +K
Sbjct: 375 SILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKS 434
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
E + S ++ M + G +E+A +
Sbjct: 435 -GFESNDFVASSLIFMYSKCGMIEDARK 461
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 152/584 (26%), Positives = 272/584 (46%), Gaps = 78/584 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF--EKSDDALSFALR-MNLIGVVFDA 57
++MY K + A +F + + VSWN +++GF E D + LR M GV D
Sbjct: 144 LDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDD 203
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD- 116
T+S L+ + + + +QLH I+K G+ + V NA IT YS+ G L +A RVFD
Sbjct: 204 GTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDG 263
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ ++D V+WN++L+ + D A ++M + G D ++T+ SAC H+ N
Sbjct: 264 AVGSRDLVTWNSMLAAFLAH-DRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDN-- 320
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTY--SKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
GK +HG+ IK G V + N +++ Y S DA VF M ++ +SW +++
Sbjct: 321 -GKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTG 379
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + E+A+ LF MR V + F ++ + S ++ G+ IH L +K+ F S
Sbjct: 380 FSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESN 439
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI- 348
V + LI MY++ ++D+ K F++ + I+WN+++ YAQ+G A+ FF +
Sbjct: 440 DFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRD 499
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL------LDMY 402
K+ K + TF + A+ A I L R +++K + SD + + +D++
Sbjct: 500 KKVKMDHITF---VAALTACSHIGLVEQGR---YLLK-SMASDYGISPRMEHYACAVDLF 552
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
G+ G + E++ + +E+ PD++ +
Sbjct: 553 GRAGYLDEAKAL----------------------------------IESMPFDPDAMVWK 578
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD-HYSCMVDMLGRVGRLEEA-------- 513
++L C G I + +L+ +EP Y + +M G + R +E
Sbjct: 579 TLLGACRACGDIELAAQVASHLLE---LEPEEHCTYVILSNMYGHLKRWDEKACMARLMR 635
Query: 514 EELVGQIPGGPGLSV---LQSLLGACRIHGNVEMGERIADALMK 554
E V ++PG + V + + + R H + E +I + LM+
Sbjct: 636 ERKVKKVPGWSWIEVKNEVHAFIADDRCHSHFEEIYQILEQLME 679
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/638 (32%), Positives = 346/638 (54%), Gaps = 17/638 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
MY K G A +F+ + + ++ WN ++ G+ K+ +++L +M+ +G+ D
Sbjct: 352 MYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEH 411
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
S L GL H +VK G ++ V NALI+ Y++ + A VFD M
Sbjct: 412 ALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRM 471
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P++D++SWN+++SG T +G EAI + M +G LD + S AC +G
Sbjct: 472 PHQDTISWNSVISGCTSNG-LNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVG 530
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNR- 236
+ +HG S+K G S+ N L+ YS C N++FR M +NV+SWT MI S R
Sbjct: 531 RVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRA 590
Query: 237 ---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ L +EM LDG+ P+ ++H + +K+G+ +HG I+ V
Sbjct: 591 GLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVA 650
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N L+ MY +M+++ VFD ++ ++IISWN LI GY++N + + F ++ + KP
Sbjct: 651 NALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQFKP 710
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N T +L AV + SL+ G+ H++ ++ G D +AL+DMY K G++ ++
Sbjct: 711 NTVTMTCILPAVASIS--SLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARV 768
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F+ +K+ +WT +I+ HG + + F++M GV PD+ +F ++L C +G+
Sbjct: 769 LFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGL 828
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+G F++M K+Y IEP HY+C+VD+L G L+EA E + +P P S+ SLL
Sbjct: 829 TAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLL 888
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
CRIH +V++ E++AD + K+EP +G YVL++N+YAE WE V L+ + +G+R+
Sbjct: 889 HGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRE 948
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
G SW +V +H F + + HP E R+AE L
Sbjct: 949 NTGCSWIEVR--GKVHVFIADNRNHP---EWNRIAEFL 981
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 145/484 (29%), Positives = 244/484 (50%), Gaps = 26/484 (5%)
Query: 4 YCKSGQFDKALCIFNNLNN--PDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAV 58
Y K G A +F+ + D+ W +++S + K+ D +S +M GV DA
Sbjct: 140 YLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAH 199
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
S L G +H L+ K GL V NALI +YSR G + +A +VFD M
Sbjct: 200 AVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSM 259
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL- 177
+D++SWN+ +SGY +G + A+ +M +G + V+ S AC E EL
Sbjct: 260 HARDAISWNSTISGYFSNG-WHDRAVDLFSKMWSEGTEISSVTVLSVLPACA-ELGFELV 317
Query: 178 GKQIHGVSIKMGY---------GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVIS 227
GK +HG S+K G G ++G+ L+ Y KC G A +VF M + NV
Sbjct: 318 GKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHV 377
Query: 228 WTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
W ++ + E+++ LF++M G+ P++ L+ I+ + ++G + HG +
Sbjct: 378 WNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLV 437
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K F ++ +VCN LI+ YA+ + ++ VFD + ++ ISWN++ISG NGL+ A++
Sbjct: 438 KLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIE 497
Query: 343 AFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F + ++ + ++ T SVL A + + G+ H + +K GL + + +ALLDM
Sbjct: 498 LFVRMWMQGHELDSTTLLSVLPACARSHYWFV--GRVVHGYSVKTGLIGETSLANALLDM 555
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y + ++F +K+ +WTA+I++ R G ++ V +EM G++PD
Sbjct: 556 YSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAV 615
Query: 462 LSVL 465
SVL
Sbjct: 616 TSVL 619
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/544 (27%), Positives = 268/544 (49%), Gaps = 38/544 (6%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
+Y + G + A+ +F++++ D +SWN+ +SG+ + D A+ +M G +VT
Sbjct: 242 LYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVT 301
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGL--DSEVY-------VGNALITMYSRWGRLVE 110
+ L C + L G +H +K GL D E +G+ L+ MY + G +
Sbjct: 302 VLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGS 361
Query: 111 ARRVFDEMPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
ARRVFD MP+K +V WN I+ GY + ++ E++L +M G+ D + +
Sbjct: 362 ARRVFDAMPSKGNVHVWNLIMGGYAKAAEFE-ESLLLFEQMHELGITPDEHALSCLLKCI 420
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
G HG +K+G+GT +V N L+S Y+K + +A VF RM ++ ISW
Sbjct: 421 TCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWN 480
Query: 230 TMIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
++IS +N E A+ LF M + G + T + ++ A + + GR++HG +K
Sbjct: 481 SVISGCTSNGLNSE-AIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVK 539
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
T + E S+ N L+ MY+ + ++F ++ + ++SW A+I+ Y + GL
Sbjct: 540 TGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGL----FDK 595
Query: 344 FFGVIKES-----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
G+++E KP+ + SVL+ G A D SLK G+ H + I+ G++ V +AL
Sbjct: 596 VAGLLQEMVLDGIKPDVFAVTSVLH--GFAGDESLKQGKSVHGYAIRNGMEKLLPVANAL 653
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
++MY ++ E++ VF+ K +W +I +R+ + F +M + +P++
Sbjct: 654 MEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNT 712
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS--CMVDMLGRVGRLEEAEEL 516
+T +L + +GR + L+ +E D Y+ +VDM + G L A L
Sbjct: 713 VTMTCILPAVASISSLERGREIHAYALRRGFLE---DSYTSNALVDMYVKCGALLVARVL 769
Query: 517 VGQI 520
++
Sbjct: 770 FDRL 773
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 259/538 (48%), Gaps = 55/538 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y KS D A+ +F+ + + D +SWN+V+SG + +A+ +RM + G D+
Sbjct: 452 ISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDS 511
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C + G +H VK GL E + NAL+ MYS ++F
Sbjct: 512 TTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRN 571
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ VSW A+++ YT+ G + A L L EM+ G++ D + TS +++L+
Sbjct: 572 MAQKNVVSWTAMITSYTRAGLFDKVAGL-LQEMVLDGIKPDVFAVTSVLHGFAGDESLKQ 630
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
GK +HG +I+ G + V N LM Y C +A VF + ++++ISW T+I S
Sbjct: 631 GKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSR 690
Query: 235 NR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++ SLF +M L PN VT ++ A++ + ++ GR IH ++ FL +
Sbjct: 691 NNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYT 749
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ MY + ++ + +FD L+ + +ISW +I+GY +G AV A F ++ S
Sbjct: 750 SNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAV-ALFEQMRGSG 808
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ +F ++L A CHS + G F
Sbjct: 809 VEPDTASFSAILYAC-------------CHSGLTAEGW------------------KFFN 837
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ R + + K + +T I+ L+ G+ + F+ +E+ + PDS ++S+L C
Sbjct: 838 AMRKEYKIEPKLKH-YTCIVDLLSHTGNLKEA---FEFIESMPIEPDSSIWVSLLHGC-- 891
Query: 471 NGMIHKGRHLFDSML-KDYHIEP-SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
IH+ L + + + + +EP + +Y + ++ R E ++L +I GG GL
Sbjct: 892 --RIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKI-GGRGL 946
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 198/444 (44%), Gaps = 32/444 (7%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEV--YVGNALITMYSRWGRLVEARRVFD 116
+Y + C + + H+L V+ G + +G L+ Y + G L AR VFD
Sbjct: 96 SYCAVVQLCGEERSLEAARRAHAL-VRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFD 154
Query: 117 EMPNK--DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
EMP + D W +++S Y + GD+ E + +M G+ D + + +
Sbjct: 155 EMPPRVADVRVWTSLMSAYAKAGDFQ-EGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGS 213
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
+ G+ IHG+ K+G G +V N L++ YS+C DA +VF MH R+ ISW + IS
Sbjct: 214 ITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISG 273
Query: 235 N-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL-- 287
+ AV LF +M +G + VT + ++ A + G+++HG +K+ L
Sbjct: 274 YFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWD 333
Query: 288 -------SEPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYA-----QN 334
+ ++ + L+ MY + M + +VFD + + + WN ++ GYA +
Sbjct: 334 LESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEE 393
Query: 335 GLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
L L G+ P+ + +L + + G H +++K+G + V
Sbjct: 394 SLLLFEQMHELGI----TPDEHALSCLLKCITCLS--CARDGLVAHGYLVKLGFGTQCAV 447
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
+AL+ Y K I + VF+ + +W ++IS +G + F M +G
Sbjct: 448 CNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGH 507
Query: 455 RPDSITFLSVLTVCGRNGMIHKGR 478
DS T LSVL C R+ GR
Sbjct: 508 ELDSTTLLSVLPACARSHYWFVGR 531
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/630 (34%), Positives = 338/630 (53%), Gaps = 78/630 (12%)
Query: 90 SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG------------ 137
+E ++ N L++ Y+R GRL +ARRVFDE+P+ ++ S+NA+LS + + G
Sbjct: 793 AETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAI 852
Query: 138 ------------------DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
G +A+L L M L+ SF SA SAC EK+ G
Sbjct: 853 PDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGV 912
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
Q+H + K + V +G+ L+ Y+KCE +A +VF M +RN++SW ++I+ +
Sbjct: 913 QVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNG 972
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+ LF M G P++VT ++ A + +EGR +H +K++ E V +
Sbjct: 973 PVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLS 1032
Query: 295 --------------------------------CLITMYARFESMQDSEKVFDELSCREII 322
LIT YAR +++D++ VF ++ + +I
Sbjct: 1033 NALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVI 1092
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
+WN LI+ YAQNG A++ F + +ES P YT+G+VLNA G D+ L GQ+ H
Sbjct: 1093 AWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQL--GQQAHV 1150
Query: 382 HIIKVGL------DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
H++K G +SD VG++L+DMY K GSI + +VF + +W A+I A+
Sbjct: 1151 HVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQ 1210
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
+G + ++ F+ M PDS+T + VL+ CG +G++ +GR F SM +D+ I PS D
Sbjct: 1211 NGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQD 1270
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM 555
HY+CM+D+LGR G L+E EEL+ ++ P + SLLG+CR+H NVEMGE A L ++
Sbjct: 1271 HYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFEL 1330
Query: 556 EPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGD 615
+P SG YVL+SN+YAE G W V +R MK +GV K+ G SW ++G + F + D
Sbjct: 1331 DPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIEIG--RKVSVFLARD 1388
Query: 616 NTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
N HP EI+ + + +M ++ E A
Sbjct: 1389 NGHPCKNEIHAILRIIQMQMSRVSVDSENA 1418
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 180/603 (29%), Positives = 293/603 (48%), Gaps = 45/603 (7%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + D SWN +++ ++ +ALS MN +G+ T ++ LS C +
Sbjct: 107 LFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAECLD 166
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
QLH I K S V +G AL+ +Y L +ARR FD++ +++SWN I+
Sbjct: 167 LCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRR 226
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Y G G A+ M+ G+R + + A AC LE G+ IH ++ GY
Sbjct: 227 YHLAG-MGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEH 285
Query: 193 HVSVGNVLMSTYSKCE-----------------------VTG--------DANKVFRRMH 221
HV V + ++ Y+KC V+G DA +VF M
Sbjct: 286 HVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMK 345
Query: 222 DRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
+RN++SW M+ SM+ A+ LF++MR + + +T ++ A + + +G
Sbjct: 346 ERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEE 405
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK--VFDELSCREIISWNALISGYAQN 334
+H IK F S P + N L+ MY++ ++ +E+ +F+ S R+ SWN+LISGY ++
Sbjct: 406 VHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERH 465
Query: 335 GLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
+S AA+ A + E PN TF S L A A LK G + H+++I+ G + D I+
Sbjct: 466 SMSEAALYALTKMQSEVTPNQSTFSSALAAC--ANIFLLKQGMQIHAYMIRKGYEIDDIL 523
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
S L+DMY K S R+F + W ++I A G E ++ F EM+ +G+
Sbjct: 524 RSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGI 583
Query: 455 RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
+ DS+TFL L C G + GR F +++ D I P +HY CM+++LG+ G + E E
Sbjct: 584 KADSVTFLGALVSCISEGHVRLGRSYF-TLMMDESIIPRIEHYECMIELLGKHGCMVELE 642
Query: 515 ELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKG 574
+ V +P P ++ + CR +GN ++GER A + P +V + + G
Sbjct: 643 DFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVQFVATVDYESNDG 702
Query: 575 DWE 577
E
Sbjct: 703 GRE 705
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 145/521 (27%), Positives = 247/521 (47%), Gaps = 95/521 (18%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++ + + G+ A +F+ + +PD S+N V++ + DAL F M+ V +A
Sbjct: 833 LSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNA 892
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++++ALS C + G+Q+H+L+ K +VY+G+AL+ MY++ EARRVF+
Sbjct: 893 YSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEA 952
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ VSWN++++ Y Q+G G EA++ + MM+ G D V+ S SAC
Sbjct: 953 MPERNIVSWNSLITCYEQNGPVG-EALVLFVSMMKAGFVPDEVTLASVMSACAGLAADRE 1011
Query: 178 GKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCE-----------------------VTG-- 211
G+Q+H +K + + + N L+ Y+KC +TG
Sbjct: 1012 GRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYA 1071
Query: 212 ------DANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIG 260
DA VF +M ++NVI+W +I+ E+A+ LF ++ + V P T+
Sbjct: 1072 RSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGN 1131
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFL------SEPSVCNCLITMYARFESMQDSEKVFD 314
+++A ++ G+ H +K F S+ V N L+ MY + S+ D KVF+
Sbjct: 1132 VLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFE 1191
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVI--KESKPNAYTFGSVLNAVGAAEDIS 372
++ R+ +SWNA+I G+AQNG + A+ F ++ KES P++ T VL+A G
Sbjct: 1192 RMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKES-PDSVTMIGVLSACG------ 1244
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE-----KSEFAWT 427
HS +++ E +R F E S+ +T
Sbjct: 1245 -------HSGLVE------------------------EGRRYFRSMTEDHGIIPSQDHYT 1273
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+I L R G + V KEM + PD++ + S+L C
Sbjct: 1274 CMIDLLGRAGHLKEVEELIKEM---SMEPDAVLWASLLGSC 1311
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 231/503 (45%), Gaps = 47/503 (9%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
++ N I + G + +AR +FD MP +D SWNAI++ ++ G + EA+ M
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAG-HPSEALSLFSNMN 143
Query: 152 RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
G+R + S S C +L +Q+HG K + ++V +G L+ Y C +
Sbjct: 144 SLGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLA 203
Query: 212 DANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
DA + F + + N ISW ++ + AV +F M GV P T + A
Sbjct: 204 DARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACR 263
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ------------------- 307
N ++EGR IH ++ + V + ++ MYA+ +M
Sbjct: 264 DNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTS 323
Query: 308 ------------DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-N 354
D+++VF+ + R ++SWNA+++GY ++ A+ F + +E++ +
Sbjct: 324 IVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFD 383
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR- 413
A T GSVL+A DI G+ H+ IK G S PI+ +AL+ MY K G + ++R
Sbjct: 384 AITLGSVLSACTGILDIG--KGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERL 441
Query: 414 -VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F E+ ++W ++IS RH E+ + +M+++ V P+ TF S L C
Sbjct: 442 LLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACANIF 500
Query: 473 MIHKGRHLFDSML-KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
++ +G + M+ K Y I+ S ++DM + + + + + P + + S
Sbjct: 501 LLKQGMQIHAYMIRKGYEIDDILR--SVLIDMYCKCRQFDYSIRIFEARPSR-DVILWNS 557
Query: 532 LLGACRIHGNVEMGERIADALMK 554
++ C G E G + D + K
Sbjct: 558 MIFGCAYSGKGEYGLDLFDEMQK 580
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 158/320 (49%), Gaps = 14/320 (4%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTAL 64
G+ A +F + ++VSWN +L+G+ +S D AL +M FDA+T + L
Sbjct: 332 GRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVL 391
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR--VFDEMPNKD 122
S C G ++H+ +K G S + NAL+ MYS+ G L A R +F+ +D
Sbjct: 392 SACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERD 451
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
S SWN+++SGY + EA L + M+ + + +F+SA +AC + L+ G QIH
Sbjct: 452 SYSWNSLISGYERHS--MSEAALYALTKMQSEVTPNQSTFSSALAACANIFLLKQGMQIH 509
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNRE 237
I+ GY + +VL+ Y KC + ++F R+VI W +MI S E
Sbjct: 510 AYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGE 569
Query: 238 DAVSLFKEMRLDGVCPNDVTFIG-LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
+ LF EM+ G+ + VTF+G L+ IS G+ V+ GR L + + + C+
Sbjct: 570 YGLDLFDEMQKQGIKADSVTFLGALVSCISEGH-VRLGRSYFTLMMDESIIPRIEHYECM 628
Query: 297 ITMYARFESMQDSEKVFDEL 316
I + + M + E + +
Sbjct: 629 IELLGKHGCMVELEDFVEHM 648
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 148/343 (43%), Gaps = 40/343 (11%)
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
+K+ F++E + N L++ YAR + D+ +VFDE+ S+NAL+S +A+ G A
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRP-ADA 845
Query: 342 QAFFGVIKESKP---------------------------------NAYTFGSVLNAVGAA 368
+A F I + NAY+F S L+A A
Sbjct: 846 RALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAE 905
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+D + G + H+ + K D +GSALLDMY K E++RVF E++ +W +
Sbjct: 906 KDS--RTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNS 963
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+I+ ++G + F M G PD +T SV++ C +GR + ++K
Sbjct: 964 LITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSD 1023
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
+ +VDM + GR A + ++ +S + G R NVE + +
Sbjct: 1024 RFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYAR-SANVEDAQMV 1082
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
+M ++ ++ YA+ G+ E L +K + V
Sbjct: 1083 ---FSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESV 1122
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MYCK QFD ++ IF + D++ WN+++ G K + L M G+ D+
Sbjct: 528 IDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADS 587
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ AL C+ G +L++ + + +I + + G +VE +
Sbjct: 588 VTFLGALVSCISEGHVRLGRSYFTLMMDESIIPRIEHYECMIELLGKHGCMVELEDFVEH 647
Query: 118 MPNKDSVS 125
MP + + +
Sbjct: 648 MPFEPTTA 655
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/631 (33%), Positives = 355/631 (56%), Gaps = 18/631 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F + ++V+W ++L+G+ ++ D +S RM GV + T+S+ LS
Sbjct: 113 VFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGM 172
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G +H+ +KFG S V+V N+L+ MY++ G + EAR VF M +D VSWN +++G
Sbjct: 173 VDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAG 232
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
+G +EA+ + L ++++ + C + K+L L +Q+H +K G+ +
Sbjct: 233 LVLNGR-DLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHS 291
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMISMNRED-----AVSLFKEM 246
+ +V LM Y+K A VF M +NV+SWT MI ++ A +LF M
Sbjct: 292 YGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRM 351
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
R DGV PND+T+ I +S + + IH IKTN+ P+V L+ Y++ S
Sbjct: 352 REDGVAPNDLTY-STILTVSEASFPPQ---IHAQVIKTNYECTPTVGTALMVSYSKLCST 407
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV 365
+++ +F + ++++SW+A+++ YAQ G A AF + KPN +T S ++A
Sbjct: 408 EEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDAC 467
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
A+ + G++ H+ IK V SAL+ MY ++GSI +Q VF ++ +
Sbjct: 468 -ASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLS 526
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W +++S A+HG + ++ F++ME +G+ D +TFLSV+ C G++ +G+ FD M+
Sbjct: 527 WNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMV 586
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+DY I P+ DHY+CMVD+ R G+L+E L+ +P G ++ ++LLGACR+H NVE+G
Sbjct: 587 RDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELG 646
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
+ A+ L+ +EP S +YVL+SN+Y+ G W+ +RK M +K VRKE G SW +
Sbjct: 647 KLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIK-- 704
Query: 606 DGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ +H F + D +HP SE+IY + +++K
Sbjct: 705 NKVHFFIASDKSHPLSEQIYAKLRAMTAKLK 735
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 227/452 (50%), Gaps = 21/452 (4%)
Query: 74 LFGLQLHSLIVKFGLD-SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
+ G QLH+L V+ G D ++ VG +L+ MY W +++ R+VF+ M ++ V+W ++L+G
Sbjct: 72 VLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTG 131
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Y Q G ++ + M +G+ + +F+S S + ++LG+ +H SIK G +
Sbjct: 132 YIQAGVL-LDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCS 190
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEMR 247
V V N LM+ Y+KC + +A VF RM R+++SW T+++ +N D A+ LF + R
Sbjct: 191 TVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSR 250
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
+ T+ +I+ + + R +H +K F S +V L+ Y + +
Sbjct: 251 SSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLD 310
Query: 308 DSEKVFDELS-CREIISWNALISGYAQNG-LSLAAVQAFFGVIKES--KPNAYTFGSVLN 363
+ VF +S + ++SW A+I G QNG + LAA A F ++E PN T+ ++L
Sbjct: 311 KALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAA--ALFSRMREDGVAPNDLTYSTILT 368
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
A+ + H+ +IK + P VG+AL+ Y K S E+ +F +K
Sbjct: 369 VSEAS------FPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDV 422
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM-IHKGRHLFD 482
+W+A+++ A+ GD N F +M G++P+ T S + C + GR F
Sbjct: 423 VSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQ-FH 481
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
++ + + S +V M R G +E A+
Sbjct: 482 AISIKHRCHDALCVSSALVSMYARKGSIENAQ 513
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 228/454 (50%), Gaps = 22/454 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
MNMY K G ++A +F + D+VSWNT+++G + +AL +
Sbjct: 199 MNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTE 258
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TYST ++ C + + QLHS ++K G S V AL+ Y++ G+L +A VF
Sbjct: 259 STYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLL 318
Query: 118 MP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNL 175
M +++ VSW A++ G Q+GD + A AL MR+ G+ + +++++ +
Sbjct: 319 MSGSQNVVSWTAMIDGCIQNGDIPLAA--ALFSRMREDGVAPNDLTYSTILTV----SEA 372
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
QIH IK Y +VG LM +YSK T +A +F+ + ++V+SW+ M++
Sbjct: 373 SFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCY 432
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSE 289
+ A + F +M + G+ PN+ T I A S V GR H + IK
Sbjct: 433 AQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDA 492
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-I 348
V + L++MYAR S+++++ VF+ + R+++SWN+++SGYAQ+G S A+ F + +
Sbjct: 493 LCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEV 552
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGS 407
+ + TF SV+ +G A ++ GQ+ +++ G+ + ++D+Y + G
Sbjct: 553 EGIDMDGLTFLSVI--MGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGK 610
Query: 408 IFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ E+ + W A++ A H + E
Sbjct: 611 LDETMSLIEGMPFPAGPTIWRALLGACRVHKNVE 644
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 161/312 (51%), Gaps = 20/312 (6%)
Query: 169 CGHEKNLELGKQIHGVSIKMGYGT-HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
CG + LGKQ+H + ++ G+ + VG L+ Y D KVF M RNV++
Sbjct: 65 CGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVT 124
Query: 228 WTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
WT++++ + D +SLF MR +GV PN TF ++ ++ +V G+ +H I
Sbjct: 125 WTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSI 184
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K S VCN L+ MYA+ ++++ VF + R+++SWN L++G NG L A+Q
Sbjct: 185 KFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQ 244
Query: 343 AF------FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
F ++ ES T+ +V+N + + L ++ HS ++K G S V +
Sbjct: 245 LFHDSRSSITMLTES-----TYSTVINLCANLKHLGL--ARQLHSSVLKHGFHSYGNVMT 297
Query: 397 ALLDMYGKRGSIFESQRVF-NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
AL+D Y K G + ++ VF + ++ +WTA+I ++GD F M GV
Sbjct: 298 ALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVA 357
Query: 456 PDSITFLSVLTV 467
P+ +T+ ++LTV
Sbjct: 358 PNDLTYSTILTV 369
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQ 419
++ G+ D L G++ H+ ++ G D I VG++L+DMY S+ + ++VF
Sbjct: 61 IIKICGSVPDRVL--GKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGML 118
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
+++ WT++++ + G VM+ F M +GV P+ TF SVL++ GM+ G+H
Sbjct: 119 KRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQH 178
Query: 480 LFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAE 514
+ +K + C +++M + G +EEA
Sbjct: 179 VHAQSIK---FGCCSTVFVCNSLMNMYAKCGLVEEAR 212
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/645 (34%), Positives = 350/645 (54%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+ MY +G D A +F+ ++ D V WN ++ G+ K+ D A+ M G +
Sbjct: 189 IKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNF 248
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + LS C L G+QLH+L VK+GL+ EV V N L++MY++ L EA R+F
Sbjct: 249 ATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGL 308
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D V+WN ++SG Q+G +A+ +M + GL+ D V+ S A +
Sbjct: 309 MPRDDLVTWNGMISGCVQNGLVD-DALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQ 367
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
GK+IHG ++ V + + L+ Y KC A VF +V+ +TMIS +
Sbjct: 368 GKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVL 427
Query: 235 NR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
NR E AV +F+ + G+ PN V + A + ++ G+ +HG +K + V
Sbjct: 428 NRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYV 487
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ L+ MY++ + S +F ++S ++ ++WN++IS +AQNG A+ F +I E
Sbjct: 488 ESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGV 547
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
K N T S+L+A I +G+ H IIK + +D SAL+DMYGK G++ +
Sbjct: 548 KYNNVTISSILSACAGLPAI--YYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELA 605
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
RVF EK+E +W +IISA HG + ++ M+ +G + D +TFL++++ C
Sbjct: 606 LRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHA 665
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + +G LF M ++YHIEP +H SCMVD+ R G+L++A + + +P P + +
Sbjct: 666 GQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGA 725
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACR+H NVE+ E + L K++P G YVLMSN+ A G W+ V+ +R+ MK K V
Sbjct: 726 LLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKV 785
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K G+SW DV + H F + D HP SEEIY + L E+K
Sbjct: 786 QKIPGYSWVDVNNTS--HLFVAADKNHPDSEEIYMSLKSLIIELK 828
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 164/556 (29%), Positives = 284/556 (51%), Gaps = 21/556 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDI---VSWNTVLSGFEKSDD---ALSFALRM--NLIGVV 54
MY + +F A+ +F++L + WN ++ GF + A+ F ++M +
Sbjct: 85 MYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPR 144
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D T + C G +H GLD ++YVG+ALI MY+ G L AR V
Sbjct: 145 PDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREV 204
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEK 173
FD M +D V WN ++ GY + GD V + + L +MR G + + S C E
Sbjct: 205 FDGMDERDCVLWNVMMDGYVKAGD--VASAVGLFRVMRASGCDPNFATLACFLSVCAAEA 262
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+L G Q+H +++K G V+V N L+S Y+KC+ +A ++F M ++++W MIS
Sbjct: 263 DLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMIS 322
Query: 234 MNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ DA+ LF +M+ G+ P+ VT L+ A++ N K+G+ IHG ++
Sbjct: 323 GCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHV 382
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ + + L+ +Y + ++ ++ VFD +++ + +ISGY N +S AAV+ F ++
Sbjct: 383 DVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLL 442
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
KPNA S L A A +++ GQ H +++K + V SAL+DMY K G
Sbjct: 443 ALGIKPNAVMVASTLPA--CASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGR 500
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ S +F++ K E W ++IS+ A++G+ E ++ F++M +GV+ +++T S+L+
Sbjct: 501 LDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSA 560
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C I+ G+ + ++K I S ++DM G+ G LE A + +P +S
Sbjct: 561 CAGLPAIYYGKEIHGIIIKG-PIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVS 619
Query: 528 VLQSLLGACRIHGNVE 543
S++ A HG V+
Sbjct: 620 -WNSIISAYGAHGLVK 634
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/650 (33%), Positives = 367/650 (56%), Gaps = 21/650 (3%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYS 61
C SG + A +F+ + + D V+WNT+++G+ +S + A F M G D T+
Sbjct: 47 CFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFG 106
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
+ L G Q+HSLIVK G + VY G+AL+ MY++ R+ +A VF MP +
Sbjct: 107 SILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVR 166
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
+ VSWNA++ G+ Q GD A L M ++G+R++ +F + +K +L Q+
Sbjct: 167 NFVSWNALIDGFVQVGDRDT-AFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQL 225
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR-RMHDRNVISWTTMISM-----N 235
H IK G + ++ N ++ YS+C + DA +VF + R++++W +M+
Sbjct: 226 HCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDK 285
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
EDA +LF EM+ G P+ T+ +I A G+ H L IK ++CN
Sbjct: 286 DEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNA 345
Query: 296 LITMYARF--ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-- 351
LITMY + +SM+ + +F + ++ +SWN++++G++Q G S A++ FG ++ S
Sbjct: 346 LITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALK-LFGHMRSSLE 404
Query: 352 KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + Y + +VL + D++ L+ GQ+ H +K G DS+ V S+L+ MY K G I +
Sbjct: 405 EIDDYAYSAVLRSCS---DLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIED 461
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ + F +T ++S W +I+ A A+HG + ++ F M + V+ D +TF++VLT C
Sbjct: 462 AWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSH 521
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +GR + SM DY I P +HY+C VD+ GR G LEEA+ L+ +P P VL+
Sbjct: 522 VGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLK 581
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGACR GN+E+ ++A L+++EP +YV++SN+Y W+ A + + M+ +
Sbjct: 582 TLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDKASVTRLMRERK 641
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNS 640
V+K G+SW +V + +H F + D +HP SE++Y++ L EMK L+S
Sbjct: 642 VKKVPGWSWIEVK--NEVHAFKAEDRSHPYSEDVYQILGELMEEMKRLHS 689
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 209/416 (50%), Gaps = 22/416 (5%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRW--GRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
H K G+ S +YV N ++ YS+ G L A ++FDEMP+KD+V+WN +++GY + G
Sbjct: 22 HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESG 81
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ G A L M R+G + D +F S H +LG+Q+H + +K+GY V G
Sbjct: 82 NLGA-AWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAG 140
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVC 252
+ L+ Y+KCE DA VF+ M RN +SW +I +R+ A L M+ +GV
Sbjct: 141 SALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVR 200
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
D TF L+ + K +H IK ++CN +T Y+ ++D+++V
Sbjct: 201 VEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRV 260
Query: 313 FD-ELSCREIISWNALISGYAQNGLSLAAVQAF-----FGVIKESKPNAYTFGSVLNAVG 366
FD + R++++WN+++ Y + A F FG +P+ YT+ V++A
Sbjct: 261 FDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGF----EPDIYTYTCVISACF 316
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK--RGSIFESQRVFNETQEKSEF 424
AA + +G+ H+ +IK GL+ + +AL+ MY K S+ + +F+ + K
Sbjct: 317 AAAHKN--YGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRV 374
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+W +I++ ++ G E + F M + D + +VL C ++ G+ +
Sbjct: 375 SWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQI 430
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 215/436 (49%), Gaps = 30/436 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K + + A +F + + VSWN ++ GF + D A M GV +
Sbjct: 144 LDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVED 203
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD- 116
T++ L+ + + +QLH I+K GL+ + NA +T YS G L +A+RVFD
Sbjct: 204 GTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDG 263
Query: 117 EMPNKDSVSWNAILSGY-TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ +D V+WN++L Y D D +A +EM G D ++T SAC +
Sbjct: 264 AVGTRDLVTWNSMLVAYLVHDKD--EDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHK 321
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC--EVTGDANKVFRRMHDRNVISWTTMIS 233
GK H + IK G V++ N L++ Y K + A +F M ++ +SW ++++
Sbjct: 322 NYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILT 381
Query: 234 -----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
EDA+ LF MR +D + ++ + S +++ G+ IH L +KT F S
Sbjct: 382 GFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDS 441
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
V + LI MY++ ++D+ K F++ + I+WN+++ YAQ+G A+ F ++
Sbjct: 442 NDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALD-LFSIM 500
Query: 349 KES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL------LD 400
+E K + TF +VL A + L RC ++K ++SD + + +D
Sbjct: 501 REREVKLDHVTFVAVLTACS---HVGLVEQGRC---VLK-SMESDYGIPPRMEHYACAVD 553
Query: 401 MYGKRGSIFESQRVFN 416
++G+ G + E++ + +
Sbjct: 554 LFGRAGYLEEAKALID 569
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/582 (35%), Positives = 336/582 (57%), Gaps = 43/582 (7%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
++ N L++ YS+ G L + +RVFD MPN D VSWN++LSGY +G E++ M+
Sbjct: 71 LFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLIS-ESVRVYNMML 129
Query: 152 RKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
+ G + L+ ++F++ + ++LG+QIHG K GY +++ VG+ L+ Y+K
Sbjct: 130 KDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFI 189
Query: 211 GDANKVFRRMHDRNV-------------------------------ISWTTMISMNRE-- 237
DAN++F + ++N+ ISWTT+I+ +
Sbjct: 190 NDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNG 249
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+AV FKEM ++G C + TF ++ A + EG+ IH I+T++ V +
Sbjct: 250 LFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGS 309
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKP 353
L+ MY + +++ +E VF ++ + +ISW A++ GY QNG S AV+ F + + E P
Sbjct: 310 ALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHP 369
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ +T GSV+++ A SL+ G + H + GL V +AL+ +YGK GS+ + +
Sbjct: 370 DDFTLGSVISS--CANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQ 427
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F+E + + E +WTA++S A+ G ++ F+ M G+ PD +TF+ VL+ C R G+
Sbjct: 428 LFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGL 487
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ KG H F+ M+K++ I P PDHY+CM+D+L R GRLEEA+ + Q+P P +LL
Sbjct: 488 VEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLL 547
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
+CR++GN+E+G+ A++L K+EP SY+L+S++YA KG W+ VA LRKGM+ GV+K
Sbjct: 548 SSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKK 607
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
E G SW + +H FS+ D + P S++IY E L +M
Sbjct: 608 EPGHSWIKYK--NKVHIFSADDRSSPFSDQIYAKLESLYLKM 647
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 158/559 (28%), Positives = 266/559 (47%), Gaps = 83/559 (14%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----SDDALSFALRMNLIGVVFD 56
++ Y K G +F+++ N D+VSWN++LSG+ S+ + + + V +
Sbjct: 78 LSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLN 137
Query: 57 AVTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRL------- 108
+T+ST L + GF+ G Q+H I KFG S ++VG+ L+ MY++ G +
Sbjct: 138 RITFSTMLILS-SNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIF 196
Query: 109 ------------------------VEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAI 144
VEA ++FD MP KDS+SW I++G TQ+G + EA+
Sbjct: 197 EEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFK-EAV 255
Query: 145 LALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTY 204
EM +G +D +F S +ACG L+ GKQIH I+ Y ++ VG+ L+ Y
Sbjct: 256 DKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMY 315
Query: 205 SKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFI 259
KC A VFR+M +NVISWT M+ + E+AV +F +M+ + + P+D T
Sbjct: 316 CKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLG 375
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
+I + + ++EG HG + + + +V N LIT+Y + S++ + ++F E+ R
Sbjct: 376 SVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIR 435
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQR 378
+ +SW AL+SGYAQ G + + F ++ P+ TF VL+A A + +
Sbjct: 436 DEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGY--- 492
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H + + I + + D Y T +I L+R G
Sbjct: 493 ---HYFECMVKEHRI--TPIPDHY------------------------TCMIDLLSRAGR 523
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP-SPDHY 497
E N +M PD+I + ++L+ C NG + G+ +S+ K +EP +P Y
Sbjct: 524 LEEAKNFINQMP---FSPDAIGWATLLSSCRLNGNLEIGKWAAESLHK---LEPQNPASY 577
Query: 498 SCMVDMLGRVGRLEEAEEL 516
+ + G+ ++ +L
Sbjct: 578 ILLSSIYAAKGKWDDVAKL 596
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 201/394 (51%), Gaps = 27/394 (6%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+N+ D +SW T+++G ++ +A+ M + G D T+ + L+ C G
Sbjct: 226 LFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTAC---GG 282
Query: 73 FLF---GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAI 129
FL G Q+H+ I++ ++VG+AL+ MY + + A VF +M +K+ +SW A+
Sbjct: 283 FLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAM 342
Query: 130 LSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
L GY Q+G Y EA+ +M R + D + S S+C + +LE G Q HG ++ G
Sbjct: 343 LVGYGQNG-YSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASG 401
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFK 244
V+V N L++ Y KC A+++F M R+ +SWT ++S + + +SLF+
Sbjct: 402 LICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFE 461
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE-PSVCNCLITMYARF 303
M G+ P+ VTF+G++ A S LV++G +K + ++ P C+I + +R
Sbjct: 462 TMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRA 521
Query: 304 ESMQDSEKVFDELS-CREIISWNALISGYAQNG---LSLAAVQAFFGVIKESKPNAYTFG 359
+++++ +++ + I W L+S NG + A ++ + ++ +
Sbjct: 522 GRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLS 581
Query: 360 SVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDP 392
S+ A G +D++ L+ G R ++G+ +P
Sbjct: 582 SIYAAKGKWDDVAKLRKGMR------EMGVKKEP 609
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 118/280 (42%), Gaps = 67/280 (23%)
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNA-------- 326
+ +H I+T E + N LI Y + ++++ VFD + + SWN
Sbjct: 25 KKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKL 84
Query: 327 -----------------------LISGYAQNGLSLAAVQAFFGVIKESKP--NAYTFGSV 361
L+SGYA NGL +V+ + ++K+ N TF ++
Sbjct: 85 GYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTM 144
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L + L G++ H I K G S VGS L+DMY K G I ++ R+F E EK
Sbjct: 145 LILSSNRGFVDL--GRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEK 202
Query: 422 S-------------------------------EFAWTAIISALARHGDYESVMNQFKEME 450
+ +WT II+ L ++G ++ +++FKEM
Sbjct: 203 NIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMG 262
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-DYH 489
+G D TF SVLT CG + +G+ + +++ DY
Sbjct: 263 IEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQ 302
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
++ H II+ + + + + L++ YGK G + ++ VF+ + + F+W ++SA ++
Sbjct: 25 KKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKL 84
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
G + + F M N D +++ S+L+ NG+I + +++ MLKD + +
Sbjct: 85 GYLQDMQRVFDSMPNH----DVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRIT 140
Query: 497 YSCMVDMLGRVGRLEEAEELVGQI 520
+S M+ + G ++ ++ GQI
Sbjct: 141 FSTMLILSSNRGFVDLGRQIHGQI 164
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 228/716 (31%), Positives = 369/716 (51%), Gaps = 83/716 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---------EKSDDALS-------- 43
+ MY K A +F+ + D VSWN +L G+ +K DA+
Sbjct: 84 IQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVE 143
Query: 44 -FALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNAL---- 98
F RM +G VFD T++ L C E G+Q+H L VK G D +V G+AL
Sbjct: 144 LFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMY 203
Query: 99 -------------------------------------------------ITMYSRWGRLV 109
+ MY + L
Sbjct: 204 AKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLS 263
Query: 110 E-ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASA 168
+ + ++F+ +PN + S+NAI+ GY + D G+EA+ + + GL LD VS + A A
Sbjct: 264 DCSNQLFNSLPNHNLQSYNAIIVGYAR-SDKGIEALGMFRLLQKSGLGLDEVSLSGAXRA 322
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C K G Q+HG+S+K +++ V N ++ Y KC +A VF M R+ +SW
Sbjct: 323 CAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSW 382
Query: 229 TTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
+I+ N E +SLF M G+ P++ T+ ++ A + + G IH IK
Sbjct: 383 NAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIK 442
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ + V LI MY++ M+ +EK+ D L+ + ++SWNA+ISG++ S A +
Sbjct: 443 SRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKT 502
Query: 344 FFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
F +++ P+ +T+ ++L+ A ++++ G++ H+ IIK L SD + S L+DMY
Sbjct: 503 FSKMLEMGVDPDNFTYATILDT--CANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMY 560
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K G++ + Q +F + + W A++ A+HG E + F+ M+ + V+P+ TFL
Sbjct: 561 SKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFL 620
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+VL CG G++ KG H F SML +Y ++P +HYSC+VD++GR G++ +A EL+ +P
Sbjct: 621 AVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPF 680
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
+ ++LL C+IHGNVE+ E+ A +++++EP S +YVL+SN+YA G W V L
Sbjct: 681 EADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKL 740
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
RK M+ G++KE G SW ++ +H F GD HPRS+EIY + L EMK++
Sbjct: 741 RKMMRFNGLKKEPGCSWIEIK--SEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWV 794
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 144/539 (26%), Positives = 246/539 (45%), Gaps = 81/539 (15%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+S C D + G Q H+ ++ V+V N LI MY + L A +VFD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAIL---------ALIEMM-----RKGLRLDHVSFTS 164
P +D+VSWNA+L GY GD GV L ++E+ R G D +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD----ANKVFRRM 220
+C ++ G QIHG+++KMG+ V G+ L+ Y+KC V D ++F+ M
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223
Query: 221 H--------------------------------------------------DRNVISWTT 230
+ N+ S+
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNA 283
Query: 231 MI-SMNRED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I R D A+ +F+ ++ G+ ++V+ G A ++ EG +HGL +K+
Sbjct: 284 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSL 343
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
S V N ++ MY + ++ ++ VF+E+ R+ +SWNA+I+ + QNG + F
Sbjct: 344 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 403
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+++ +P+ +T+GSVL A + +L G H+ IIK + D VG AL+DMY K
Sbjct: 404 WMLQSGMEPDEFTYGSVLKACAGWQ--ALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSK 461
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + +++++ + E++ +W AIIS + E F +M GV PD+ T+ ++
Sbjct: 462 CGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATI 521
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
L C + G+ + ++K E D Y S +VDM + G +++ + + + P
Sbjct: 522 LDTCANLVTVELGKQIHAQIIKK---ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 577
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/648 (33%), Positives = 363/648 (56%), Gaps = 22/648 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K +F + ++V+W ++L+G+ + D + RM GV ++
Sbjct: 146 VDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNS 205
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+++ LS G ++H+ VKFG S V+V N+L+ MY++ G + EAR VF
Sbjct: 206 VTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCG 265
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSWN +++G +G + +EA+ + L ++ + C + K L L
Sbjct: 266 METRDMVSWNTLMAGLVLNG-HDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGL 324
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMISMNR 236
+Q+H +K G+ ++ +V LM YSK G+A +F M +NV+SWT MI+
Sbjct: 325 ARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCI 384
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ A +LF MR DGV PND T+ ++ A S+ +L + IH IKTN+
Sbjct: 385 QNGDVPLAAALFSRMREDGVAPNDFTYSTILTA-SVASLPPQ---IHAQVIKTNYECTSI 440
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+ Y++ + +++ +F + ++++SW+A+++ YAQ G S A F +
Sbjct: 441 VGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHG 500
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN +T SV++A A+ + G++ H+ IK V SAL+ MY ++GSI
Sbjct: 501 LKPNEFTISSVIDAC-ASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIES 559
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+Q +F ++ +W +++S A+HG + ++ F++ME +G+ D +TFLSV+ C
Sbjct: 560 AQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAH 619
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG--QIPGGPGLSV 528
G++ +G+ FDSM +DY I P+ +HY+CMVD+ R G+L+EA L+ P GP V
Sbjct: 620 AGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGP--MV 677
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
++LLGAC++H NVE+G+ A+ L+ +EP S +YVL+SN+Y+ G W+ +RK M +
Sbjct: 678 WRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDT 737
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
K V+KE G SW + + +H F + D +HP SE+IY + +++K
Sbjct: 738 KKVKKEAGCSWIQIK--NKVHSFIASDKSHPLSEQIYAKLRAMTTKLK 783
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 236/453 (52%), Gaps = 23/453 (5%)
Query: 74 LFGLQLHSLIVKFGLD-SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
+ G QLH L ++ G D +V VG +L+ MY +W +V+ R+VF+ MP ++ V+W ++L+G
Sbjct: 120 VLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTG 179
Query: 133 YTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
Y QDG + ++ L MR +G+ + V+F S S + ++LG+++H S+K G
Sbjct: 180 YIQDG--ALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCC 237
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEM 246
+ V V N LM+ Y+KC + +A VF M R+++SW T+++ +N D A+ LF +
Sbjct: 238 STVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDS 297
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
R T+ +I + + R +H +K F S +V L+ Y++ +
Sbjct: 298 RSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQL 357
Query: 307 QDSEKVFDELS-CREIISWNALISGYAQNG-LSLAAVQAFFGVIKES--KPNAYTFGSVL 362
++ +F +S + ++SW A+I+G QNG + LAA A F ++E PN +T+ ++L
Sbjct: 358 GNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAA--ALFSRMREDGVAPNDFTYSTIL 415
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
A A+ + H+ +IK + IVG+ALL Y K + E+ +F +K
Sbjct: 416 TASVASLPPQI------HAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKD 469
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR-NGMIHKGRHLF 481
+W+A+++ A+ GD + N F +M G++P+ T SV+ C + GR F
Sbjct: 470 VVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQ-F 528
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
++ + + S +V M R G +E A+
Sbjct: 529 HAISIKHRCHDALCVSSALVSMYARKGSIESAQ 561
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 186/365 (50%), Gaps = 14/365 (3%)
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASAC 169
AR+ FDE+P+++++ + L + + G +A+ +++ R G R+ + C
Sbjct: 57 ARQAFDEIPHRNTL--DHALFDHARRGSVH-QALDHFLDVHRCHGGRVGGGALVGVLKVC 113
Query: 170 GHEKNLELGKQIHGVSIKMGYGT-HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
G + LGKQ+HG+ I+ G+ V VG L+ Y K D KVF M RNV++W
Sbjct: 114 GSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTW 173
Query: 229 TTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
T++++ + D + LF MR +GV PN VTF ++ ++ +V GR +H +K
Sbjct: 174 TSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVK 233
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
S VCN L+ MYA+ ++++ VF + R+++SWN L++G NG L A+Q
Sbjct: 234 FGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQL 293
Query: 344 FFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
F + T+ +V+ + + L ++ HS ++K G S V +AL+D Y
Sbjct: 294 FHDSRSSITMLTQSTYATVIKLCANIKQLGL--ARQLHSSVLKRGFHSYGNVMTALMDAY 351
Query: 403 GKRGSIFESQRVF-NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
K G + + +F + ++ +WTA+I+ ++GD F M GV P+ T+
Sbjct: 352 SKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTY 411
Query: 462 LSVLT 466
++LT
Sbjct: 412 STILT 416
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 12/211 (5%)
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVG 366
+ + FDE+ R + +AL +A+ G A+ F V + + VL G
Sbjct: 57 ARQAFDEIPHRNTLD-HALFD-HARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114
Query: 367 AAEDISLKHGQRCHSHIIKVGLD-SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ D L G++ H I+ G D D VG++L+DMY K S+ + ++VF +++
Sbjct: 115 SVPDRVL--GKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVT 172
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
WT++++ + G VM F M +GV P+S+TF SVL+V GM+ GR + +
Sbjct: 173 WTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSV 232
Query: 486 KDYHIEPSPDHYSC--MVDMLGRVGRLEEAE 514
K + C +++M + G +EEA
Sbjct: 233 K---FGCCSTVFVCNSLMNMYAKCGLVEEAR 260
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/634 (32%), Positives = 348/634 (54%), Gaps = 14/634 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLIGVVFDA-- 57
+ ++ G +A F+++ N +V+WN +++G+ + +FAL ++ +
Sbjct: 103 IKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSI 162
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ L C G G + H+ ++K G S+ +G AL++MY + G + AR+VFD
Sbjct: 163 ITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDG 222
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +D ++N ++ GY + GD G +A M ++G + + +SF S C + L
Sbjct: 223 LYKRDVSTFNVMIGGYAKSGD-GEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAW 281
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GK +H + G V V L+ Y C A +VF +M R+V+SWT MI
Sbjct: 282 GKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAE 341
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ N EDA LF M+ +G+ P+ +T+I +I+A + + R IH ++ F ++ V
Sbjct: 342 NSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLV 401
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
L+ MYA+ +++D+ +VFD +S R+++SW+A+I Y +NG A + F + + +
Sbjct: 402 DTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNV 461
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ T+ ++LNA G + L G ++ IK L S VG+AL++M K GSI +
Sbjct: 462 EPDVVTYINLLNACGHLGALDL--GMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERA 519
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ +F ++ W +I + HG+ ++ F M + RP+S+TF+ VL+ C R
Sbjct: 520 RYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRA 579
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + +GR F +L I P+ + Y CMVD+LGR G L+EAE L+ ++P P S+ +
Sbjct: 580 GFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWST 639
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACRI+GN+++ ER A+ + EP YV +S++YA G WE VA +RK M+S+GV
Sbjct: 640 LLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGV 699
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
RKE G +W +V LH F D +HP++ EIY
Sbjct: 700 RKEQGCTWIEVE--GKLHTFVVEDRSHPQAGEIY 731
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 256/507 (50%), Gaps = 13/507 (2%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D+ TY C+ G Q+ I++ G +Y N LI ++S G ++EAR+
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD + NK V+WNAI++GY Q G EA +M+ + + ++F AC
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVK-EAFALFRQMVDEAMEPSIITFLIVLDACSSPAG 177
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L+LGK+ H IK+G+ + +G L+S Y K A +VF ++ R+V ++ MI
Sbjct: 178 LKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGG 237
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
S + E A LF M+ +G PN ++F+ ++ S + G+ +H C+ T + +
Sbjct: 238 YAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDD 297
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V LI MY S++ + +VFD++ R+++SW +I GYA+N ++ F ++
Sbjct: 298 VRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENS-NIEDAFGLFATMQ 356
Query: 350 ES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
E +P+ T+ ++NA ++ D+SL + HS +++ G +D +V +AL+ MY K G+
Sbjct: 357 EEGIQPDRITYIHIINACASSADLSL--AREIHSQVVRAGFGTDLLVDTALVHMYAKCGA 414
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I ++++VF+ + +W+A+I A +G E F M+ V PD +T++++L
Sbjct: 415 IKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNA 474
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
CG G + G ++ +K + P + +++M + G +E A + + +
Sbjct: 475 CGHLGALDLGMEIYTQAIKADLVSHIPVG-NALINMNVKHGSIERARYIFENMV-QRDVV 532
Query: 528 VLQSLLGACRIHGNVEMGERIADALMK 554
++G +HGN + D ++K
Sbjct: 533 TWNVMIGGYSLHGNAREALDLFDRMLK 559
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/632 (33%), Positives = 351/632 (55%), Gaps = 41/632 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
+++ CK G+ +AL I N + +L G D VF +
Sbjct: 68 VSILCKQGRLKEALGILNTM----------ILQGTRVYSD-------------VFRGL-- 102
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
L C G ++H+ I+K G+ Y+ N L++MY++ G L +ARRVFD + +
Sbjct: 103 ---LQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRD 159
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
++ VSW A++ + G+ +EA M G + D V+F S +A + + L++G++
Sbjct: 160 RNIVSWTAMIEAFVA-GNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-- 238
+H K G VG L+ Y+KC A +F ++ ++NV++WT +I+ +
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQ 278
Query: 239 ---AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
A+ L ++M+ V PN +T+ ++ + ++ G+ +H I++ + E V N
Sbjct: 279 VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNA 338
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
LITMY + ++++ K+F +L R++++W A+++GYAQ G A+ F + ++ KP+
Sbjct: 339 LITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPD 398
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
TF S L + + L+ G+ H ++ G D + SAL+ MY K GS+ +++ V
Sbjct: 399 KMTFTSALTSCSSPA--FLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLV 456
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
FN+ E++ AWTA+I+ A+HG + F++M+ +G++PD +TF SVL+ C G++
Sbjct: 457 FNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLV 516
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+GR F SM DY I+P +HYSC VD+LGR G LEEAE ++ +P PG SV +LL
Sbjct: 517 EEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLS 576
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
ACRIH +VE GER A+ ++K++P G+YV +SN+YA G +E +R+ M+ + V KE
Sbjct: 577 ACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKE 636
Query: 595 VGFSWADVGDIDG-LHGFSSGDNTHPRSEEIY 625
G SW +V DG +H F D +HP ++EIY
Sbjct: 637 PGQSWIEV---DGKVHVFHVEDKSHPEAKEIY 665
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/643 (32%), Positives = 354/643 (55%), Gaps = 15/643 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MY G + IF+ + N + WN ++S + K +++S +M +GVV + T
Sbjct: 138 MYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYT 197
Query: 60 YSTALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
++ L C G + + +H ++K G S V N+LI Y ++G + A +FDE+
Sbjct: 198 FTCVLK-CFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDEL 256
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
D VSWN++++G +G G + I+M+ G+ +D + S AC + NL LG
Sbjct: 257 SEPDVVSWNSMINGCVVNGFSG-NGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLG 315
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-RE 237
+ +HG +K + V N L+ YSKC A +VF +M D ++SWT++I+ RE
Sbjct: 316 RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVRE 375
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
DA+ LF EM+ GV P+ T ++HA + + + +GR +H IK S V
Sbjct: 376 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVT 435
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N LI MYA+ S++++ VF ++ ++I+SWN +I GY+QN L A++ F + K+ KP
Sbjct: 436 NALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFKP 495
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ T VL A +L G+ H HI++ G SD V AL+DMY K G + +Q
Sbjct: 496 DDITMACVLPACAGLA--ALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQL 553
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F+ +K +WT +I+ HG ++ F EM G+ PD +F ++L C +G+
Sbjct: 554 LFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGL 613
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+++G F+SM + +EP +HY+C+VD+L R+G L +A + + +P P ++ LL
Sbjct: 614 LNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLL 673
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
CRIH +V++ E++A+ + ++EP + YV+++N+YAE WE V LRK M+ +G ++
Sbjct: 674 SGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQ 733
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G SW +VG + F +G++ HP++++I + L +M+
Sbjct: 734 NPGCSWIEVG--GKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQ 774
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 249/471 (52%), Gaps = 15/471 (3%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+Y + L C + + G ++HS+I+ G+ + +G L+ MY G LV+ R++FD++
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
N WN ++S Y + G++ E++ +M + G+ + +FT ++
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFR-ESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 214
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MN 235
K++HG +K+G+G++ +V N L++ Y K A+ +F + + +V+SW +MI+ +N
Sbjct: 215 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 274
Query: 236 --REDAVSLFKEMRLDGVCPNDVTFIG-LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + +F +M + GV + T + L+ +IGNL GR +HG +K F E
Sbjct: 275 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNL-SLGRALHGFGVKACFSEEVVF 333
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
N L+ MY++ ++ + +VF ++ I+SW ++I+ Y + GL A+ F + K
Sbjct: 334 SNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGV 393
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ YT S+++A + SL G+ HS++IK G+ S+ V +AL++MY K GS+ E+
Sbjct: 394 RPDIYTVTSIVHACACSS--SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEA 451
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VF++ K +W +I +++ + F +M+ K +PD IT VL C
Sbjct: 452 RLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGL 510
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSC-MVDMLGRVGRLEEAEELVGQIP 521
+ KGR + +L+ + S H +C +VDM + G L A+ L IP
Sbjct: 511 AALDKGREIHGHILRRGYF--SDLHVACALVDMYAKCGLLVLAQLLFDMIP 559
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 204/403 (50%), Gaps = 16/403 (3%)
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKG--LRLDHVSFTSAASACGHEKNLELGKQIHGV 184
NA ++ + + GD + IE++ K L S+ S C +K+LE GK++H V
Sbjct: 65 NAKINKFCEMGD-----LRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSV 119
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDA 239
I G ++G L+ Y C K+F ++ + V W ++S N ++
Sbjct: 120 IISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRES 179
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
VSLFK+M+ GV N TF ++ + VKE + +HG +K F S +V N LI
Sbjct: 180 VSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAA 239
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTF 358
Y +F ++ + +FDELS +++SWN++I+G NG S ++ F +I + + T
Sbjct: 240 YFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTL 299
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
SVL A ++SL G+ H +K + + + LLDMY K G++ + VF +
Sbjct: 300 VSVLVACANIGNLSL--GRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 357
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+ + +WT+II+A R G Y + F EM++KGVRPD T S++ C + + KGR
Sbjct: 358 GDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGR 417
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ ++K+ P + +++M + G +EEA + +IP
Sbjct: 418 DVHSYVIKNGMGSNLPV-TNALINMYAKCGSVEEARLVFSKIP 459
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 176/341 (51%), Gaps = 14/341 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + A +F + + IVSW ++++ + + DA+ M GV D
Sbjct: 338 LDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDI 397
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++ + C G +HS ++K G+ S + V NALI MY++ G + EAR VF +
Sbjct: 398 YTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSK 457
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P KD VSWN ++ GY+Q + L L M+K + D ++ AC L+
Sbjct: 458 IPVKDIVSWNTMIGGYSQ--NLLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDK 515
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
G++IHG ++ GY + + V L+ Y+KC + A +F + +++ISWT MI+ M
Sbjct: 516 GREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGM 575
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +A+S F EMR+ G+ P++ +F +++A S L+ EG ++ EP +
Sbjct: 576 HGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFN-SMRNECGVEPKL 634
Query: 293 CN--CLITMYARFESMQDSEKVFDELSCR-EIISWNALISG 330
+ C++ + AR ++ + K + + + + W L+SG
Sbjct: 635 EHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 675
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 15/221 (6%)
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFG-----SVLNAVGAAEDISLKHGQRC 379
NA I+ + + G A++ +K +Y G SVL AE SL+ G+R
Sbjct: 65 NAKINKFCEMGDLRNAIELL------TKSKSYELGLNSYCSVLQL--CAEKKSLEDGKRV 116
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
HS II G+ D +G+ L+ MY G + + +++F++ F W ++S A+ G++
Sbjct: 117 HSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNF 176
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC 499
++ FK+M+ GV + TF VL G + + + + +LK + +
Sbjct: 177 RESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLK-LGFGSNTAVVNS 235
Query: 500 MVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
++ + G +E A L ++ P + S++ C ++G
Sbjct: 236 LIAAYFKFGGVESAHNLFDEL-SEPDVVSWNSMINGCVVNG 275
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/648 (35%), Positives = 345/648 (53%), Gaps = 18/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K + + A +F L + V WN ++ G+ +S + + M G D
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ LS C G Q HS+I+K L ++VGNAL+ MY++ G L +AR++F+
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++D+V+WN I+ Y QD + EA M G+ D S AC H L
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENES-EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQ 547
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+H +S+K G + G+ L+ YSKC + DA KVF + + +V+S +I+
Sbjct: 548 GKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ 607
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
N E+AV LF+EM GV P+++TF ++ A + G HG K F SE
Sbjct: 608 NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYL 667
Query: 294 N-CLITMYARFESMQDSEKVFDELSC-REIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
L+ MY M ++ +F ELS + I+ W ++SG++QNG A++ F+ ++
Sbjct: 668 GISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALK-FYKEMRHD 726
Query: 352 K--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ TF +VL SL+ G+ HS I + D D + + L+DMY K G +
Sbjct: 727 GVLPDQATFVTVLRVCSVLS--SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMK 784
Query: 410 ESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S +VF+E + +S +W ++I+ A++G E + F M + PD ITFL VLT C
Sbjct: 785 GSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTAC 844
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G + GR +F+ M+ Y IE DH +CMVD+LGR G L+EA++ + P +
Sbjct: 845 SHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARL 904
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
SLLGACRIHG+ GE A+ L+++EP S +YVL+SN+YA +G WE LRK M+
Sbjct: 905 WSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRD 964
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+GV+K G+SW DV H F++GD +H +I E L MK
Sbjct: 965 RGVKKVPGYSWIDVE--QRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/564 (29%), Positives = 288/564 (51%), Gaps = 18/564 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+N Y + G+ A +F +++PD+V+WN ++SG K A+ + M V
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + LS GL +H+ +K GL S +YVG++L++MYS+ ++ A +VF+
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ K+ V WNA++ GY +G+ + + ++M G +D +FTS S C +LE+
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGE-SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G Q H + IK ++ VGN L+ Y+KC DA ++F RM DR+ ++W T+I
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ 506
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N +A LFK M L G+ + + A + + + +G+ +H L +K +
Sbjct: 507 DENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHT 566
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
+ LI MY++ ++D+ KVF L ++S NALI+GY+QN L A V + +
Sbjct: 567 GSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVN 626
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD-PIVGSALLDMYGKRGSIFES 411
P+ TF +++ A E ++L G + H I K G S+ +G +LL MY + E+
Sbjct: 627 PSEITFATIVEACHKPESLTL--GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEA 684
Query: 412 QRVFNE-TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+F+E + KS WT ++S +++G YE + +KEM + GV PD TF++VL VC
Sbjct: 685 CALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSV 744
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYS--CMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+ +GR + + +H+ D + ++DM + G ++ + ++ ++ +
Sbjct: 745 LSSLREGRAIHSLI---FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVS 801
Query: 529 LQSLLGACRIHGNVEMGERIADAL 552
SL+ +G E +I D++
Sbjct: 802 WNSLINGYAKNGYAEDALKIFDSM 825
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 234/469 (49%), Gaps = 53/469 (11%)
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
VFD + AL+ + G +HS + G+DSE +GNA++ +Y++ ++ A +
Sbjct: 64 VFDEMPQRLALALRI-------GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEK 116
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
FD + KD +WN++LS Y+ G G + + + + + + + +F+ S C E
Sbjct: 117 QFDFL-EKDVTAWNSMLSMYSSIGKPG-KVLRSFVSLFENQIFPNKFTFSIVLSTCARET 174
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
N+E G+QIH IKMG + G L+ Y+KC+ DA +VF + D N + WT + S
Sbjct: 175 NVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFS 234
Query: 234 MN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
E+AV +F+ MR +G P+ + F+ +I+
Sbjct: 235 GYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT------------------------ 270
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
Y R ++D+ +F E+S ++++WN +ISG+ + G A++ FF +
Sbjct: 271 -----------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMR 319
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
K S K T GSVL+A+G ++ L G H+ IK+GL S+ VGS+L+ MY K
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDL--GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ + +VF +EK++ W A+I A +G+ VM F +M++ G D TF S+L+
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
C + + G F S++ + + + +VDM + G LE+A ++
Sbjct: 438 CAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 138/278 (49%), Gaps = 16/278 (5%)
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
G+ +H + SE + N ++ +YA+ + +EK FD L +++ +WN+++S Y+
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSS 137
Query: 334 NGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
G +++F + + PN +TF VL+ A + +++ G++ H +IK+GL+ +
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLST--CARETNVEFGRQIHCSMIKMGLERNS 195
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
G AL+DMY K I +++RVF + + WT + S + G E + F+ M ++
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD--HYSCMVDMLGRVGRL 510
G RPD + F++V+ R G + R LF M SPD ++ M+ G+ G
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEM-------SSPDVVAWNVMISGHGKRGCE 308
Query: 511 EEAEELVGQIPGG---PGLSVLQSLLGACRIHGNVEMG 545
A E + S L S+L A I N+++G
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/630 (32%), Positives = 348/630 (55%), Gaps = 13/630 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MY G K IF+ + N I WN ++S + K +++ +M +G+ D+ T
Sbjct: 101 MYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYT 160
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++ L ++H ++K G S V N+LI Y + G + AR +FDE+
Sbjct: 161 FTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELS 220
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++D VSWN+++SG T +G + + I+M+ G+ +D + + AC + NL LG+
Sbjct: 221 DRDVVSWNSMISGCTMNG-FSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGR 279
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-RE- 237
+H +K G+ V N L+ YSKC AN+VF +M + ++SWT++I+ + RE
Sbjct: 280 ALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREG 339
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+ LF EM+ G+ P+ ++HA + N + +GR +H K N S V N
Sbjct: 340 LHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSN 399
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPN 354
L+ MYA+ SM+++ +F +L + I+SWN +I GY+QN L A+Q F + K+ KP+
Sbjct: 400 ALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQLKPD 459
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
T VL A +L+ G+ H HI++ G SD V AL+DMY K G + +Q++
Sbjct: 460 DVTMACVLPACAGLA--ALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQL 517
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F+ +K WT +I+ HG + ++ F++M G+ P+ +F S+L C +G++
Sbjct: 518 FDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLL 577
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+G LFDSM + +IEP +HY+CMVD+L R G L A + + +P P ++ +LL
Sbjct: 578 KEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLS 637
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
CRIH +VE+ E++A+ + ++EP + YVL++N+YAE WE V +++ + G++ +
Sbjct: 638 GCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKND 697
Query: 595 VGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
G SW +V + F +GD +HP+++ I
Sbjct: 698 QGCSWIEVQ--GKFNIFFAGDTSHPQAKMI 725
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/471 (29%), Positives = 242/471 (51%), Gaps = 15/471 (3%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
TY + L C + + G ++HS+I G+ + +G L+ MY G LV+ RR+FD +
Sbjct: 59 TYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGI 118
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
N WN ++S Y + G+Y E++ +M G+R D +FT +
Sbjct: 119 LNDKIFLWNLLMSEYAKIGNYR-ESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVREC 177
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MN 235
K++HG +K+G+G++ +V N L++ Y KC A +F + DR+V+SW +MIS MN
Sbjct: 178 KRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMN 237
Query: 236 --REDAVSLFKEMRLDGVCPNDVTFIG-LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + F +M GV + T + L+ ++GNL GR +H +K F
Sbjct: 238 GFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTL-GRALHAYGVKAGFSGGVMF 296
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
N L+ MY++ ++ + +VF ++ I+SW ++I+ + + GL A+ F + K
Sbjct: 297 NNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGL 356
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ Y SV++A + SL G+ H+HI K + S+ V +AL++MY K GS+ E+
Sbjct: 357 RPDIYAVTSVVHACACSN--SLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEA 414
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+F++ K+ +W +I +++ + F +M+ K ++PD +T VL C
Sbjct: 415 NLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQ-KQLKPDDVTMACVLPACAGL 473
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSC-MVDMLGRVGRLEEAEELVGQIP 521
+ KGR + +L+ + S H +C +VDM + G L A++L IP
Sbjct: 474 AALEKGREIHGHILRKGYF--SDLHVACALVDMYVKCGLLVLAQQLFDMIP 522
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 181/347 (52%), Gaps = 26/347 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS----------DDALSFALRMNL 50
++MY K G + A +F + IVSW ++++ + D+ S LR ++
Sbjct: 301 LDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDI 360
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
V +V ++ A S LD G ++H+ I K + S + V NAL+ MY++ G + E
Sbjct: 361 YAVT--SVVHACACSNSLDK-----GREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEE 413
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A +F ++P K+ VSWN ++ GY+Q+ EA+ ++ M+K L+ D V+ AC
Sbjct: 414 ANLIFSQLPVKNIVSWNTMIGGYSQN-SLPNEALQLFLD-MQKQLKPDDVTMACVLPACA 471
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
LE G++IHG ++ GY + + V L+ Y KC + A ++F + +++I WT
Sbjct: 472 GLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTV 531
Query: 231 MIS---MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKT 284
MI+ M+ ++A+S F++MR+ G+ P + +F +++A + L+KEG ++ + +
Sbjct: 532 MIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSEC 591
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISG 330
N + C++ + R ++ + K + + + + W AL+SG
Sbjct: 592 NIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSG 638
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/642 (32%), Positives = 367/642 (57%), Gaps = 20/642 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G +A +F+++ ++VSW +++SG+ + D+A++ ++M G + D
Sbjct: 140 LSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDH 199
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + + C + F QLH+ ++K +++ NALI+MY+++ ++ +A VF
Sbjct: 200 FTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSR 259
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLE 176
+ KD +SW ++++G++Q G Y +EA+ EM+ + + + + F SA SAC +
Sbjct: 260 IIIKDLISWGSMIAGFSQLG-YELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPD 318
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+QIHG+ IK G G+ + G L Y+KC A VF + ++++W +I+
Sbjct: 319 CGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFA 378
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N +++ S F +MR G+ PNDVT + L+ A S ++ G +H +K F +
Sbjct: 379 SVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIP 438
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQN---GLSLAAVQAFFGV 347
VCN L++MY++ ++ D+ +VF+++ + +I+SWN L++ Q G L + F
Sbjct: 439 VCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFA- 497
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
KP+ T +VL V + + S + G + H I+K GL+ D V +AL++MY K GS
Sbjct: 498 -SRIKPDHVTLTNVL--VSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGS 554
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++++F+ +W+++I A+ G + F+ M GV+P+ ITF+ +LT
Sbjct: 555 LECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTA 614
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C GM+ +G L+ +M +DY I P+ +H SCMVD+L R G L+ AE+ + Q+P P +
Sbjct: 615 CSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVV 674
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V ++LL AC++HGN+E+G+R A+ ++K++P+ S + V++ N++A G W+ A LR M+
Sbjct: 675 VWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMR 734
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
V K G SW ++ D +H F + DN HP +IY M E
Sbjct: 735 RMDVGKVPGQSWIEIK--DKVHVFLAEDNLHPERGKIYTMLE 774
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 249/487 (51%), Gaps = 17/487 (3%)
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+VTY+ ++ C G ++H ++ ++ + N +++MY + G L EAR +FD
Sbjct: 98 SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFD 157
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP K+ VSW +++SGY++ G+ AI ++M+R G DH +F S +C + +
Sbjct: 158 SMPLKNVVSWTSMISGYSRYGEED-NAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFK 216
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
L +Q+H +K +G + N L+S Y+K DA VF R+ +++ISW +MI+
Sbjct: 217 LARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFS 276
Query: 237 E-----DAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A+ F+EM V PN+ F A S GR IHGLCIK S+
Sbjct: 277 QLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDL 336
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
L MYA+ ++ + VF + ++++WNA+I+G+A + +FF ++
Sbjct: 337 FAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVS-NAKESSSFFSQMRH 395
Query: 351 SK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ PN T S+L A +E + L HG + HS+I+K+G + D V ++LL MY K ++
Sbjct: 396 TGLVPNDVTVLSLLCA--CSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNL 453
Query: 409 FESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
++ +VF + K++ +W +++A + V+ K M ++PD +T +VL
Sbjct: 454 NDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVS 513
Query: 468 CGRNGMIHKGRHLFDSMLKD-YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
G+ G + ++K +++ S + +++M + G LE A ++ I G P +
Sbjct: 514 SGQIASYEVGSQIHCFIMKSGLNLDISVS--NALINMYTKCGSLECARKMFDSI-GNPDI 570
Query: 527 SVLQSLL 533
SL+
Sbjct: 571 ISWSSLI 577
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 198/387 (51%), Gaps = 10/387 (2%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
L V++T +AC ++LE G++IH + Y + + N ++S Y KC +A +
Sbjct: 96 LKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNM 155
Query: 217 FRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F M +NV+SWT+MIS ++A++L+ +M G P+ TF ++ + S +
Sbjct: 156 FDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDF 215
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
K R +H +K+ F ++ N LI+MY +F M D+ VF + +++ISW ++I+G+
Sbjct: 216 KLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGF 275
Query: 332 AQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
+Q G L A+ F ++ +S +PN + FGS +A ++ + G++ H IK GL
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSA--CSKLLEPDCGRQIHGLCIKFGLG 333
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
SD G +L DMY K G + ++ VF ++ AW AII+ A + + + F +M
Sbjct: 334 SDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQM 393
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
+ G+ P+ +T LS+L C M++ G + ++K P S ++ M +
Sbjct: 394 RHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNS-LLSMYSKCSN 452
Query: 510 LEEAEELVGQIPGGPGLSVLQSLLGAC 536
L +A ++ I + +LL AC
Sbjct: 453 LNDALQVFEDIGNKADIVSWNTLLTAC 479
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 4/161 (2%)
Query: 328 ISGYAQNGLSLAAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
I + L A++AF F S + T+ ++NA + SL+HG++ H H++
Sbjct: 69 IISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLR--SLEHGRKIHRHMLT 126
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
D I+ + +L MYGK GS+ E++ +F+ K+ +WT++IS +R+G+ ++ +
Sbjct: 127 CNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITL 186
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ +M G PD TF S++ C R L +LK
Sbjct: 187 YVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLK 227
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/584 (34%), Positives = 339/584 (58%), Gaps = 46/584 (7%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
+Y N +++ YS+ GR+ E +FD MP +D VSWN+++SGY G +++ A M+
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCG-LIYQSVKAYNLML 133
Query: 152 RK--GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK--- 206
+ L+ ++F++ ++LG+QIHG +K G+ ++V VG+ L+ YSK
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193
Query: 207 ----------------------------CEVTGDANKVFRRMHDRNVISWTTMIS----- 233
C D+ ++F M +R+ ISWT+MI+
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++R DA+ +F+EM+L+ + + TF ++ A ++EG+ +H I+T++ V
Sbjct: 254 GLDR-DAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFV 312
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ L+ MY + ++++ +E VF +++C+ ++SW A++ GY QNG S AV+ F + K
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 372
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ +T GSV+++ A SL+ G + H+ + GL S V +AL+ +YGK GSI +S
Sbjct: 373 EPDDFTLGSVISS--CANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDS 430
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
R+FNE K E WTA++S A+ G + F+ M G++PD +TF+ VL+ C R
Sbjct: 431 HRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRA 490
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ KG +F+SM+ ++ I P DHY+CM+D+ R GR+EEA + ++P P +
Sbjct: 491 GLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWAT 550
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL +CR +GN+++G+ A+ LM+++P + SYVL+S++YA KG WE VA LRK M+ KG+
Sbjct: 551 LLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGL 610
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
RKE G SW + + +H FS+ D ++P S++IY E L +M
Sbjct: 611 RKEPGCSW--IKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKM 652
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 245/482 (50%), Gaps = 47/482 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE------KSDDALSFALRMNLIGVV 54
++ Y K G+ + +F+ + D VSWN+++SG+ +S A + L+ N
Sbjct: 82 LSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK-NDGSFN 140
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ +T+ST L G Q+H +VKFG S V+VG+ L+ MYS+ G + AR+V
Sbjct: 141 LNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKV 200
Query: 115 FDEMPNK-------------------------------DSVSWNAILSGYTQDGDYGVEA 143
FDE+P K DS+SW ++++G+TQ+G +A
Sbjct: 201 FDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG-LDRDA 259
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
I EM + L++D +F S +ACG L+ GKQ+H I+ Y ++ V + L+
Sbjct: 260 IDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDM 319
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTF 258
Y KC+ A VF++M +NV+SWT M+ + E+AV F +M+ G+ P+D T
Sbjct: 320 YCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTL 379
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC 318
+I + + ++EG H + + +S +V N L+T+Y + S++DS ++F+E+S
Sbjct: 380 GSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISF 439
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQ 377
++ ++W AL+SGYAQ G + + F ++ KP+ TF VL+A A + K Q
Sbjct: 440 KDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVE-KGNQ 498
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARH 436
S I + G+ + ++D++ + G I E++ N+ +W ++S+ +
Sbjct: 499 IFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFY 558
Query: 437 GD 438
G+
Sbjct: 559 GN 560
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 147/328 (44%), Gaps = 70/328 (21%)
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI---- 328
+ + +H IKT E + N LI+ YA+ S+ + KVFD++ + SWN ++
Sbjct: 27 KAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYS 86
Query: 329 ---------------------------SGYAQNGLSLAAVQAFFGVIKESKP---NAYTF 358
SGYA GL +V+A+ ++K N TF
Sbjct: 87 KLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITF 146
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF--------- 409
++L + A++ +K G++ H H++K G S VGS L+DMY K G I
Sbjct: 147 STLL--ILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDEL 204
Query: 410 ----------------------ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+S+R+F E +E+ +WT++I+ ++G ++ F+
Sbjct: 205 PEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFR 264
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-DYHIEPSPDHYSCMVDMLGR 506
EM+ + ++ D TF SVLT CG + +G+ + +++ DY + + S +VDM +
Sbjct: 265 EMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY--KDNIFVASALVDMYCK 322
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLG 534
++ AE + ++ +S L+G
Sbjct: 323 CKNIKSAEAVFKKMTCKNVVSWTAMLVG 350
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/650 (32%), Positives = 354/650 (54%), Gaps = 22/650 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K + D A IF + ++V W+ V++G+ ++D + L M +G+
Sbjct: 180 VDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQ 239
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY++ C F G QLH +K + +G A + MY++ R+ +A +VF+
Sbjct: 240 STYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNT 299
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+PN S+NAI+ GY + D G++A+ + R L D +S + A +AC K
Sbjct: 300 LPNPPRQSYNAIIVGYARQ-DQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLE 358
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G Q+HG+++K G G ++ V N ++ Y KC +A +F M R+ +SW +I+ + +
Sbjct: 359 GIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQ 418
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +SLF M + P+D T+ ++ A + + G IHG +K+ + V
Sbjct: 419 NEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFV 478
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGV 347
+ L+ MY + + ++EK+ D L + +SWN++ISG++ S A + F GV
Sbjct: 479 GSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGV 538
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
I P+ +T+ +VL+ I L G++ H+ I+K+ L SD + S L+DMY K G+
Sbjct: 539 I----PDNFTYATVLDVCANMATIEL--GKQIHAQILKLNLHSDVYIASTLVDMYSKCGN 592
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +S+ +F +T ++ W+A+I A A HG E + F+EM+ V+P+ F+SVL
Sbjct: 593 MQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRA 652
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G + KG H F M Y ++P +HYSCMVD+LGR ++ EA +L+ +
Sbjct: 653 CAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDV 712
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+ ++LL C++ GNVE+ E+ ++L++++P S +YVL++N+YA G W VA +R MK
Sbjct: 713 IWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMK 772
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKY 637
+ ++KE G SW +V D +H F GD HPRSEEIY L EMK+
Sbjct: 773 NCKLKKEPGCSWIEVR--DEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKW 820
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/567 (27%), Positives = 301/567 (53%), Gaps = 20/567 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y + G A +F+ + D+VSWN++LS + + ++ +RM + + D T+
Sbjct: 82 YAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATF 141
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S L C E + GLQ+H L ++ G +++V G+AL+ MYS+ +L A R+F EMP
Sbjct: 142 SVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPE 201
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
++ V W+A+++GY Q+ D +E + +M++ G+ + ++ S +C +LG Q
Sbjct: 202 RNLVCWSAVIAGYVQN-DRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQ 260
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNRED- 238
+HG ++K + +G + Y+KC+ DA KVF + + S+ +I R+D
Sbjct: 261 LHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQ 320
Query: 239 ---AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
A+ +F+ ++ + ++++ G + A S+ EG +HGL +K V N
Sbjct: 321 GLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANT 380
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
++ MY + ++ ++ +FD++ R+ +SWNA+I+ + QN + + F +++ + +P+
Sbjct: 381 ILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPD 440
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
+T+GSV+ A + +L +G H I+K G+ D VGSAL+DMYGK G + E++++
Sbjct: 441 DFTYGSVVKACAGQQ--ALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKI 498
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
+ +EK+ +W +IIS + E+ F +M GV PD+ T+ +VL VC I
Sbjct: 499 HDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATI 558
Query: 475 HKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
G+ + +LK + D Y S +VDM + G ++++ + + P ++ ++
Sbjct: 559 ELGKQIHAQILK---LNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVT-WSAM 614
Query: 533 LGACRIHGNVEMGERIAD--ALMKMEP 557
+ A HG+ E ++ + L+ ++P
Sbjct: 615 ICAYAYHGHGEQAIKLFEEMQLLNVKP 641
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 238/502 (47%), Gaps = 55/502 (10%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+S L C + + G Q H+ ++ +YV N L+ Y + + A +VFD M
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 119 PNKDSVSWNAILSGYTQDGDYGV------------------------------EAILALI 148
P++D +SWN ++ GY + G+ G ++I +
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
M + D+ +F+ AC ++ LG Q+H ++I+MG+ V G+ L+ YSKC+
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 209 VTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIH 263
A ++FR M +RN++ W+ +I+ + + + LFK+M G+ + T+ +
Sbjct: 188 KLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
+ + + K G +HG +K++F + + + MYA+ + M D+ KVF+ L S
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQS 307
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQ----RC 379
+NA+I GYA+ L A++ F +S Y ++ GA S+ G +
Sbjct: 308 YNAIIVGYARQDQGLKALEIF-----QSLQRTYLSFDEISLSGALTACSVIKGHLEGIQL 362
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H +K GL + V + +LDMYGK G++ E+ +F++ + + +W AII+A ++ +
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEI 422
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCG-----RNGMIHKGRHLFDSMLKDYHIEPSP 494
++ F M + PD T+ SV+ C GM GR + M D+ +
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVG--- 479
Query: 495 DHYSCMVDMLGRVGRLEEAEEL 516
S +VDM G+ G L EAE++
Sbjct: 480 ---SALVDMYGKCGMLMEAEKI 498
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 137/314 (43%), Gaps = 37/314 (11%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
TF ++ S + G+ H I T+F+ V NCL+ Y + +M + KVFD +
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 317 SCREIISW-------------------------------NALISGYAQNGLSLAAVQAFF 345
R++ISW N+L+S Y NG++ +++ F
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 346 GVIKESKPNAY-TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ P+ Y TF VL A ED L G + H I++G ++D + GSAL+DMY K
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGL--GLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
+ + R+F E E++ W+A+I+ ++ + + FK+M G+ T+ SV
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 465 LTVCGRNGMIHKGRHLFDSMLK-DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
C G L LK D+ + + +DM + R+ +A ++ +P
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG--TATLDMYAKCDRMSDAWKVFNTLPNP 303
Query: 524 PGLSVLQSLLGACR 537
P S ++G R
Sbjct: 304 PRQSYNAIIVGYAR 317
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/639 (33%), Positives = 358/639 (56%), Gaps = 14/639 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVT 59
MY K G D + +F + ++VSWN + S + +S+ +A+ M G++ + +
Sbjct: 126 MYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFS 185
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
S L+ C + G ++H L++K GLD + + NAL+ MYS+ G + A VF ++
Sbjct: 186 ISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA 245
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ D VSWNAI++G D A++ L EM G R + + +SA AC ELG+
Sbjct: 246 HPDVVSWNAIIAGCVLH-DCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGR 304
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
Q+H IKM + + L+ YSKCE+ DA + + M +++I+W +IS +
Sbjct: 305 QLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCG 364
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
DAVSLF +M + + N T ++ +++ +K + IH + IK+ S+ V N
Sbjct: 365 DHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVIN 424
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKP 353
L+ Y + + ++ K+F+E + +++++ ++I+ Y+Q G A++ + + + KP
Sbjct: 425 SLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKP 484
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ + S+LNA A + + G++ H H IK G D ++L++MY K GSI ++ R
Sbjct: 485 DPFICSSLLNA--CANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADR 542
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
F+E + +W+A+I A+HG + + F +M GV P+ IT +SVL C G+
Sbjct: 543 AFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGL 602
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+++G+ F+ M + I+P+ +HY+CM+D+LGR G+L EA ELV IP V +LL
Sbjct: 603 VNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALL 662
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
GA RIH N+E+G++ A L +EP SG++VL++N+YA G WE VA +RK MK V+K
Sbjct: 663 GAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKK 722
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLG 632
E G SW ++ D ++ F GD +H RS+EIY + LG
Sbjct: 723 EPGMSWIEIK--DKVYTFIVGDRSHSRSDEIYAKLDQLG 759
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 164/570 (28%), Positives = 292/570 (51%), Gaps = 28/570 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ +Y K +F A + + + D+VSW+++LSG+ ++ ++AL M L+GV +
Sbjct: 23 VTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNE 82
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L C G ++H + V G +S+ +V N L+ MY++ G L ++RR+F
Sbjct: 83 FTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGG 142
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ VSWNA+ S Y Q G EA+ EM+R G+ + S + +AC + +L
Sbjct: 143 IVERNVVSWNALFSCYVQSELCG-EAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDL 201
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G++IHG+ +KMG N L+ YSK A VF+ + +V+SW +I+
Sbjct: 202 GRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVL 261
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+ L EM+ G PN T + A + + GR +H IK + S+
Sbjct: 262 HDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFA 321
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
L+ MY++ E M D+ + +D + ++II+WNALISGY+Q G L AV F + E
Sbjct: 322 AVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDI 381
Query: 353 P-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
N T +VL +V + + ++K ++ H+ IK G+ SD V ++LLD YGK I E+
Sbjct: 382 DFNQTTLSTVLKSVASLQ--AIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEA 439
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
++F E + A+T++I+A +++GD E + + +M++ ++PD S+L C
Sbjct: 440 SKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANL 499
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSC-------MVDMLGRVGRLEEAEELVGQIPGGP 524
+G+ L H+ + C +V+M + G +E+A+ +IP
Sbjct: 500 SAYEQGKQL--------HVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIP-NR 550
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMK 554
G+ +++G HG+ + R+ + +++
Sbjct: 551 GIVSWSAMIGGYAQHGHGKEALRLFNQMLR 580
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 155/547 (28%), Positives = 277/547 (50%), Gaps = 55/547 (10%)
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
++LH+ ++KFG + + N L+T+YS+ R AR++ DE D VSW+++LSGY Q+
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G + EA+L EM G++ + +F S AC +++L +G+++HG+++ G+ + V
Sbjct: 61 G-FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFV 119
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGV 251
N L+ Y+KC + D+ ++F + +RNV+SW + S + +AV LFKEM G+
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGI 179
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
PN+ + +++A + GR IHGL +K + N L+ MY++ ++ +
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVA 239
Query: 312 VFDELSCREIISWNALISG---YAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAA 368
VF +++ +++SWNA+I+G + N L+L + G ++PN +T S L A A
Sbjct: 240 VFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKG--SGTRPNMFTLSSALKACAAM 297
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
L G++ HS +IK+ SD L+DMY K + +++R ++ +K AW A
Sbjct: 298 GFKEL--GRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNA 355
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL----------------TVCGRNG 472
+IS ++ GD+ ++ F +M ++ + + T +VL T+ ++G
Sbjct: 356 LISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSG 415
Query: 473 MIHKGRHLFDSMLKDY----HIEPSPD-----------HYSCMVDMLGRVGRLEEAEELV 517
I+ ++ +S+L Y HI+ + Y+ M+ + G EEA +L
Sbjct: 416 -IYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLY 474
Query: 518 GQIPGG---PGLSVLQSLLGACRIHGNVEMGERIADALMKM----EPAGSGSYVLMSNLY 570
Q+ P + SLL AC E G+++ +K + S S V N+Y
Sbjct: 475 LQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLV---NMY 531
Query: 571 AEKGDWE 577
A+ G E
Sbjct: 532 AKCGSIE 538
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/642 (32%), Positives = 367/642 (57%), Gaps = 20/642 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G +A +F+++ ++VSW +++SG+ + D+A++ ++M G + D
Sbjct: 140 LSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDH 199
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + + C + F QLH+ ++K +++ NALI+MY+++ ++ +A VF
Sbjct: 200 FTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSR 259
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLE 176
+ KD +SW ++++G++Q G Y +EA+ EM+ + + + + F SA SAC +
Sbjct: 260 IIIKDLISWGSMIAGFSQLG-YELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPD 318
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+QIHG+ IK G G+ + G L Y+KC A VF + ++++W +I+
Sbjct: 319 CGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFA 378
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N +++ S F +MR G+ PNDVT + L+ A S ++ G +H +K F +
Sbjct: 379 SVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIP 438
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQN---GLSLAAVQAFFGV 347
VCN L++MY++ ++ D+ +VF+++ + +I+SWN L++ Q G L + F
Sbjct: 439 VCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFA- 497
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
KP+ T +VL V + + S + G + H I+K GL+ D V +AL++MY K GS
Sbjct: 498 -SRIKPDHVTLTNVL--VSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGS 554
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++++F+ +W+++I A+ G + F+ M GV+P+ ITF+ +LT
Sbjct: 555 LECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTA 614
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C GM+ +G L+ +M +DY I P+ +H SCMVD+L R G L+ AE+ + Q+P P +
Sbjct: 615 CSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVV 674
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V ++LL AC++HGN+E+G+R A+ ++K++P+ S + V++ N++A G W+ A LR M+
Sbjct: 675 VWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMR 734
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
V K G SW ++ D +H F + DN HP +IY M E
Sbjct: 735 RMDVGKVPGQSWIEIK--DKVHVFLAEDNLHPERGKIYTMLE 774
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 249/487 (51%), Gaps = 17/487 (3%)
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+VTY+ ++ C G ++H ++ ++ + N +++MY + G L EAR +FD
Sbjct: 98 SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFD 157
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP K+ VSW +++SGY++ G+ AI ++M+R G DH +F S +C + +
Sbjct: 158 SMPLKNVVSWTSMISGYSRYGEED-NAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFK 216
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
L +Q+H +K +G + N L+S Y+K DA VF R+ +++ISW +MI+
Sbjct: 217 LARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFS 276
Query: 237 E-----DAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A+ F+EM V PN+ F A S GR IHGLCIK S+
Sbjct: 277 QLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDL 336
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
L MYA+ ++ + VF + ++++WNA+I+G+A + +FF ++
Sbjct: 337 FAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVS-NAKESSSFFSQMRH 395
Query: 351 SK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ PN T S+L A +E + L HG + HS+I+K+G + D V ++LL MY K ++
Sbjct: 396 TGLVPNDVTVLSLLCA--CSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNL 453
Query: 409 FESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
++ +VF + K++ +W +++A + V+ K M ++PD +T +VL
Sbjct: 454 NDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVS 513
Query: 468 CGRNGMIHKGRHLFDSMLKD-YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
G+ G + ++K +++ S + +++M + G LE A ++ I G P +
Sbjct: 514 SGQIASYEVGSQIHCFIMKSGLNLDISVS--NALINMYTKCGSLECARKMFDSI-GNPDI 570
Query: 527 SVLQSLL 533
SL+
Sbjct: 571 ISWSSLI 577
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 198/387 (51%), Gaps = 10/387 (2%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
L V++T +AC ++LE G++IH + Y + + N ++S Y KC +A +
Sbjct: 96 LKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNM 155
Query: 217 FRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F M +NV+SWT+MIS ++A++L+ +M G P+ TF ++ + S +
Sbjct: 156 FDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDF 215
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
K R +H +K+ F ++ N LI+MY +F M D+ VF + +++ISW ++I+G+
Sbjct: 216 KLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGF 275
Query: 332 AQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
+Q G L A+ F ++ +S +PN + FGS +A ++ + G++ H IK GL
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSA--CSKLLEPDCGRQIHGLCIKFGLG 333
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
SD G +L DMY K G + ++ VF ++ AW AII+ A + + + F +M
Sbjct: 334 SDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQM 393
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
+ G+ P+ +T LS+L C M++ G + ++K P S ++ M +
Sbjct: 394 RHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNS-LLSMYSKCSN 452
Query: 510 LEEAEELVGQIPGGPGLSVLQSLLGAC 536
L +A ++ I + +LL AC
Sbjct: 453 LNDALQVFEDIGNKADIVSWNTLLTAC 479
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 4/161 (2%)
Query: 328 ISGYAQNGLSLAAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
I + L A++AF F S + T+ ++NA + SL+HG++ H H++
Sbjct: 69 IISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLR--SLEHGRKIHRHMLT 126
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
D I+ + +L MYGK GS+ E++ +F+ K+ +WT++IS +R+G+ ++ +
Sbjct: 127 CNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITL 186
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ +M G PD TF S++ C R L +LK
Sbjct: 187 YVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLK 227
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/652 (32%), Positives = 367/652 (56%), Gaps = 14/652 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y + F A +F ++ D V++NT++SG + D AL M L G+ D+
Sbjct: 185 ISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDS 244
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT ++ L+ C G QLHS ++K G+ + + +L+ +Y + G + EA ++FD
Sbjct: 245 VTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDS 304
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ V WN +L Y Q D ++ M+ G+R + ++ C H + L
Sbjct: 305 GDRTNVVLWNLMLVAYGQIDDLA-KSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGL 363
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MN 235
G+QIH ++IK G+ + + V VL+ YSK A ++ + +++V+SWT+MI+ +
Sbjct: 364 GEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQ 423
Query: 236 RE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E +A+ FKEM+ G+ P+++ I A + V +G IH + + ++ S+
Sbjct: 424 HEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSI 483
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-S 351
N L+ +YAR +++ F+ + +E I+WN LISG+AQ+GL A++ F + + +
Sbjct: 484 WNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGA 543
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
K N +TF S ++A DI K G++ H+ +IK G S+ + +AL+ +YGK GSI ++
Sbjct: 544 KYNVFTFVSSISASANLADI--KQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDA 601
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ F E +++E +W II+ ++HG ++ F +M+ +G++P +TF+ VLT C
Sbjct: 602 KMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHV 661
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G F SM ++ I P PDHY+C+VD+LGR G+L+ A+ V ++P V ++
Sbjct: 662 GLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRT 721
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL AC++H N+E+GE A L+++EP S SYVL+SN YA G W +RK MK +GV
Sbjct: 722 LLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGV 781
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
RKE G SW +V ++ +H F GD HP +++IY L + + K+E
Sbjct: 782 RKEPGRSWIEVKNV--VHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQE 831
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 240/466 (51%), Gaps = 17/466 (3%)
Query: 27 SWNTVLSGFEKSDDALS----FALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGL--QLH 80
S+N L+GF DD FA + +V AV ++ AL C G + L ++H
Sbjct: 8 SFNRPLAGFLAPDDPEKLLPLFAAKCRQY-MVLGAVDFACALRACRG-SGRRWPLVPEIH 65
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
+ + GL +GN LI +Y++ G + ARRVF+E+ +D+VSW A+LSGY Q+G G
Sbjct: 66 AKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG-LG 124
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EA+ EM R G+ +S SAC + +LG+ IH K G+ + VGN L
Sbjct: 125 EEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNAL 184
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPND 255
+S Y +C A++VF M + +++ T+IS + + A+ +F EM+L G+ P+
Sbjct: 185 ISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDS 244
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
VT L+ A S +++G+ +H +K + + L+ +Y + ++++ ++FD
Sbjct: 245 VTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDS 304
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLK 374
++ WN ++ Y Q + F+ ++ +PN +T+ +L +I L
Sbjct: 305 GDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGL- 363
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G++ HS IK G SD V L+DMY K G + ++QR+ + +EK +WT++I+
Sbjct: 364 -GEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYV 422
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+H + + FKEM+ G+ PD+I S ++ C +H+G +
Sbjct: 423 QHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQI 468
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/527 (27%), Positives = 254/527 (48%), Gaps = 21/527 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K G +A +F L+ D VSW VLSG+ ++ ++A+ M+ GVV
Sbjct: 84 IDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTP 143
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS C E F G +H + K G SE +VGNALI++Y R A RVF +
Sbjct: 144 YVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCD 203
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M DSV++N ++SG+ Q G +G A+ EM GL D V+ S +AC +L
Sbjct: 204 MLYCDSVTFNTLISGHAQCG-HGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRK 262
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GKQ+H +K G + L+ Y K +A ++F NV+ W M+
Sbjct: 263 GKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQ 322
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + +F M GV PN T+ ++ + + G IH L IK F S+ V
Sbjct: 323 IDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYV 382
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
LI MY+++ + ++++ D + ++++SW ++I+GY Q+ A++ F KE +
Sbjct: 383 SGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETF----KEMQ 438
Query: 353 -----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
P+ S ++A + ++ G + H+ + G +D + + L+ +Y + G
Sbjct: 439 ACGIWPDNIGLASAISACAGIK--AVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGI 496
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
E+ F + K W +IS A+ G YE + F +M+ G + + TF+S ++
Sbjct: 497 SKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISA 556
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
I +G+ + ++K + + + + ++ + G+ G +E+A+
Sbjct: 557 SANLADIKQGKQIHARVIKTGYTSET-EISNALISLYGKCGSIEDAK 602
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 203/417 (48%), Gaps = 25/417 (5%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEM-MRKGLRLDHVSFTSAASAC-GHEKNL 175
M + + S+N L+G+ D E +L L R+ + L V F A AC G +
Sbjct: 1 MTPRGAASFNRPLAGFLAPDD--PEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRW 58
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
L +IH +I G + +GN+L+ Y+K A +VF + R+ +SW ++S
Sbjct: 59 PLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGY 118
Query: 236 R-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E+AV L++EM GV P ++ A + L + GR+IH K F SE
Sbjct: 119 AQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSET 178
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N LI++Y R S + +++VF ++ + +++N LISG+AQ G A+ G+ E
Sbjct: 179 FVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRAL----GIFDE 234
Query: 351 SK-----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ P++ T S+L A A D L+ G++ HS+++K G+ D I+ +LLD+Y K
Sbjct: 235 MQLSGLSPDSVTIASLLAACSAVGD--LRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKS 292
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G I E+ ++F+ + W ++ A + D + F M GVRP+ T+ +L
Sbjct: 293 GDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCML 352
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
C G I G + +K+ D Y ++DM + G L++A+ ++ I
Sbjct: 353 RTCTHTGEIGLGEQIHSLTIKNGF---QSDMYVSGVLIDMYSKYGWLDKAQRILDMI 406
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/633 (32%), Positives = 358/633 (56%), Gaps = 14/633 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
+Y + G A +F+ + D V++NT++S + + AL M L G D VT
Sbjct: 187 LYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVT 246
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++ L+ C G QLHS ++K G+ + + +L+ +Y + G +VEA +F
Sbjct: 247 IASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGD 306
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ V WN +L Y Q D ++ +M+ G+R + ++ C + + LG+
Sbjct: 307 RTNVVLWNLMLVAYGQISDLA-KSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGE 365
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNRE 237
QIH +SIK G+ + + V VL+ YSK A ++ + ++V+SWT+MI+ + E
Sbjct: 366 QIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHE 425
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+ FK+M+L G+ P+++ I A + +++G+ IH + + ++ S+ N
Sbjct: 426 FCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWN 485
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
L+ +YAR +++ +F+ + ++ I+WN ++SG+AQ+GL A++ F + + K
Sbjct: 486 ALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKY 545
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N +TF S ++A DI K G++ H+ +IK G S+ V +AL+ +YGK GSI +++
Sbjct: 546 NVFTFVSSISASANLADI--KQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKM 603
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
F E E++ +W II++ ++HG ++ F +M+ +G++P+ +TF+ VL C G+
Sbjct: 604 QFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGL 663
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ +G F SM ++ I P PDHY+C+VD+LGR G+L+ A + V ++P V ++LL
Sbjct: 664 VEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLL 723
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
ACR+H N+E+GE A L+++EP S SYVL+SN YA G W +RK MK +GVRK
Sbjct: 724 SACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRK 783
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
E G SW +V ++ +H F GD HP + +IY+
Sbjct: 784 EPGRSWIEVKNV--VHAFFVGDRLHPLAHQIYK 814
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 150/527 (28%), Positives = 264/527 (50%), Gaps = 21/527 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K G +A +F L+ D VSW +LSG+ ++ ++A+ +M+ GVV
Sbjct: 84 IDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTP 143
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS C F G +H+ + K G SE VGNALI +Y R+G L A RVF E
Sbjct: 144 YVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSE 203
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D V++N ++S + Q G+ G A+ EM G D V+ S +AC +L
Sbjct: 204 MPYCDRVTFNTLISRHAQCGN-GESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNK 262
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GKQ+H +K G + L+ Y KC V +A ++F+ NV+ W M+
Sbjct: 263 GKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQ 322
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + LF +M GV PN+ T+ L+ + + G IH L IKT F S+ V
Sbjct: 323 ISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYV 382
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGV 347
LI MY+++ + + ++ + L ++++SW ++I+GY Q+ A++ F FG+
Sbjct: 383 SGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGI 442
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
P+ S ++A + +++ GQ+ HS + G +D + +AL+++Y + G
Sbjct: 443 W----PDNIGLASAISACAGIK--AMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGR 496
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
E+ +F + K + W ++S A+ G YE + F +M GV+ + TF+S ++
Sbjct: 497 SKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISA 556
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
I +G+ + +++K + + ++ + G+ G +E+A+
Sbjct: 557 SANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDAK 602
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 227/450 (50%), Gaps = 14/450 (3%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H+ + GL + GN LI +Y++ G + ARRVF+++ +D+VSW A+LSGY ++G
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNG- 122
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
G EA+ +M G+ +S SAC E G+ +H K G + VGN
Sbjct: 123 LGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGN 182
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCP 253
L++ Y + A +VF M + +++ T+IS N E A+ +F+EMRL G P
Sbjct: 183 ALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTP 242
Query: 254 NDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
+ VT L+ A SIG+L K G+ +H +K + + L+ +Y + + ++ ++
Sbjct: 243 DCVTIASLLAACASIGDLNK-GKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEI 301
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
F ++ WN ++ Y Q + F ++ +PN +T+ +L A +I
Sbjct: 302 FKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEI 361
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
+L G++ H IK G +SD V L+DMY K G + +++R+ + K +WT++I+
Sbjct: 362 NL--GEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIA 419
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM-LKDYHI 490
+H + + FK+M+ G+ PD+I S ++ C + +G+ + + + Y
Sbjct: 420 GYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSA 479
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ S ++ +V++ R GR +EA L I
Sbjct: 480 DVSI--WNALVNLYARCGRSKEAFSLFEAI 507
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 195/408 (47%), Gaps = 13/408 (3%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASAC-GHEKNL 175
M + + S N L+G+ D E +L+L + R L V F A C G K+
Sbjct: 1 MTRRAAASLNKSLTGFLAHED--PEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHW 58
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
L IH +I G G GN+L+ Y+K + A +VF ++ R+ +SW M+S
Sbjct: 59 PLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGY 118
Query: 236 R-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E+AV L+ +M GV P ++ A + L ++GR++H K SE
Sbjct: 119 ARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSET 178
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
V N LI +Y RF S+ +E+VF E+ + +++N LIS +AQ G +A++ F + +
Sbjct: 179 VVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLS 238
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ T S+L A + D L G++ HS+++K G+ D I+ +LLD+Y K G I
Sbjct: 239 GWTPDCVTIASLLAACASIGD--LNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIV 296
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E+ +F + W ++ A + D + F +M GVRP+ T+ +L C
Sbjct: 297 EALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCT 356
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
G I+ G + +K E ++DM + G L++A ++
Sbjct: 357 YAGEINLGEQIHLLSIKT-GFESDMYVSGVLIDMYSKYGWLDKARRIL 403
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++Y K G + A F ++ + VSWNT+++ + +AL +M G+ +
Sbjct: 589 ISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPND 648
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
VT+ L+ C L EG + S+ + G+ ++ + R G+L AR+
Sbjct: 649 VTFIGVLAACSHVGLVEEGLGY---FKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARK 705
Query: 114 VFDEMP-NKDSVSWNAILSG 132
+EMP + +++ W +LS
Sbjct: 706 FVEEMPVSANAMVWRTLLSA 725
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/650 (33%), Positives = 358/650 (55%), Gaps = 24/650 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMY K G A +F+ + P++VSW +++SG+ + ++DA+ ++M G D
Sbjct: 201 INMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQ 260
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ + + C G QLH+ ++K + NALI+MY+ +G++ A VF
Sbjct: 261 LTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTR 320
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLE 176
+P KD +SW +++GY Q G Y VEA+ +++R+G + + F S SAC LE
Sbjct: 321 IPTKDLISWGTMITGYIQLG-YRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELE 379
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
GKQ+HG+ +K G +V G L Y+K A F ++ + +++SW +I+
Sbjct: 380 YGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFA 439
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +A+ F++M G+ P+ +T+I L+ + +GR IH +K F E +
Sbjct: 440 DNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEIT 499
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
VCN L+TMY + + D+ VF ++S ++SWNA++S Q F + KE
Sbjct: 500 VCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGET----FRLYKE 555
Query: 351 -----SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+KP++ T ++L AE SL G + H + IK GL D V + L+DMY K
Sbjct: 556 MHFSGNKPDSITITTLLGT--CAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKC 613
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GS+ ++ VF+ TQ +W+++I A+ G +N F+ M N GV+P+ +T+L L
Sbjct: 614 GSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGAL 673
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ +G L+ SM ++ I P+ +H+SC+VD+L R G L EAE + +
Sbjct: 674 SACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDAD 733
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
++ ++LL AC+ H NV++ ER A ++K++P+ S + V++ N++A G+WE VA LRK
Sbjct: 734 ITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKL 793
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
MK GV+K G SW +V D H F S D++HP+ IY M E L S++
Sbjct: 794 MKQMGVQKVPGQSWIEVK--DKFHIFFSEDSSHPQRNLIYTMLEELWSQV 841
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 249/476 (52%), Gaps = 24/476 (5%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
F+ TY++ + C + + ++H ++K + + N +I MY + G + +AR+V
Sbjct: 157 FEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKV 216
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD M + VSW +++SGY+Q+G +AI+ I+M R G D ++F S AC +
Sbjct: 217 FDTMQLPNVVSWTSMISGYSQNGQAN-DAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGD 275
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
++LG+Q+H IK +G H++ N L+S Y+ A+ VF R+ +++ISW TMI+
Sbjct: 276 IDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITG 335
Query: 234 ----MNREDAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIK----T 284
R +A+ LF+++ G PN+ F + A S ++ G+ +HG+C+K
Sbjct: 336 YIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRR 395
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
N + S+C+ MYA+F + ++ F ++ +I+SWNA+I+ +A NG + A+ F
Sbjct: 396 NVFAGCSLCD----MYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFF 451
Query: 345 FGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+I P++ T+ S+L G+ + L G++ HS+I+K+G D + V ++LL MY
Sbjct: 452 RQMIHIGLTPDSITYISLLCTCGSP--VRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYT 509
Query: 404 KRGSIFESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K + ++ VF + + +W AI+SA + +KEM G +PDSIT
Sbjct: 510 KCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITIT 569
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEEL 516
++L C + G + +K I D C ++DM + G L+ A ++
Sbjct: 570 TLLGTCAELTSLGVGNQVHCYSIKSGLI---LDVSVCNGLIDMYAKCGSLKHARDV 622
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 114/231 (49%), Gaps = 21/231 (9%)
Query: 340 AVQAFFGVIKES----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A++AF +K S +P+ YT S++ + A SL + ++ H H++K I+
Sbjct: 142 ALEAFDFHLKNSNSHFEPSTYT--SLV--LACANFRSLDYAKKIHDHVLKSNYQPSIILQ 197
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+ +++MYGK GS+ ++++VF+ Q + +WT++IS +++G + + +M G
Sbjct: 198 NHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQF 257
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY---HIEPSPDHYSCMVDMLGRVGRLEE 512
PD +TF SV+ C G I GR L ++K + H+ + ++ M G++E
Sbjct: 258 PDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQ----NALISMYTNFGQIEH 313
Query: 513 AEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSY 563
A + +IP +S I G +++G R+ + + G+Y
Sbjct: 314 ASNVFTRIPTKDLIS------WGTMITGYIQLGYRVEALYLFRDLLRQGTY 358
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/568 (36%), Positives = 323/568 (56%), Gaps = 12/568 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G QLH+L++ G ++ N L+ MYS+ G L A ++FD MP ++ VSW A++SG +Q
Sbjct: 24 GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+ + EAI M G +F+SA AC ++E+GKQ+H +++K G G+ +
Sbjct: 84 NSKFS-EAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDG 250
VG+ L YSKC DA KVF M ++ +SWT MI E+A+ FK+M +
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEE 202
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V + + A K GR +H +K F S+ V N L MY++ M+ +
Sbjct: 203 VTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESAS 262
Query: 311 KVFD-ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
VF + CR ++S+ LI GY + + F + ++ +PN +TF S++ A A
Sbjct: 263 NVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKA--CA 320
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+L+ G + H+ ++K+ D DP V S L+DMYGK G + ++ + F+E + +E AW +
Sbjct: 321 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNS 380
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
++S +HG + + F+ M ++GV+P++ITF+S+LT C G++ +G F SM K Y
Sbjct: 381 LVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTY 440
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
+ P +HYSC++D+LGR GRL+EA+E + ++P P S LGACRIHG+ EMG+
Sbjct: 441 GVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLA 500
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL 608
A+ L+K+EP SG+ VL+SN+YA + WE V +R M+ V+K G+SW DVG
Sbjct: 501 AEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVG--YKT 558
Query: 609 HGFSSGDNTHPRSEEIYRMAECLGSEMK 636
H F + D +HPR IY + L ++K
Sbjct: 559 HVFGAEDWSHPRKSAIYEKLDTLLDQIK 586
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 246/464 (53%), Gaps = 39/464 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFD 56
+NMY K G+ D AL +F+ + ++VSW ++SG + + S A+R M + G V
Sbjct: 47 VNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ-NSKFSEAIRTFCGMRICGEVPT 105
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+S+A+ C G Q+H L +KFG+ SE++VG+ L MYS+ G + +A +VF+
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE 165
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
EMP KD VSW A++ GY++ G++ EA+LA +M+ + + +D S ACG K +
Sbjct: 166 EMPCKDEVSWTAMIDGYSKIGEFE-EALLAFKKMIDEEVTIDQHVLCSTLGACGALKACK 224
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMI--- 232
G+ +H +K+G+ + + VGN L YSK A+ VF + RNV+S+T +I
Sbjct: 225 FGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGY 284
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ E +S+F E+R G+ PN+ TF LI A + +++G +H +K NF +P
Sbjct: 285 VETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDP 344
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + L+ MY + ++ + + FDE+ I+WN+L+S + Q+GL A++ F ++
Sbjct: 345 FVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDR 404
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS----DPIVG--------SA 397
KPNA TF S+L H+ +++ GLD D G S
Sbjct: 405 GVKPNAITFISLLTGCS-------------HAGLVEEGLDYFYSMDKTYGVVPGEEHYSC 451
Query: 398 LLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
++D+ G+ G + E++ N E + F W + + A HGD E
Sbjct: 452 VIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 208/412 (50%), Gaps = 20/412 (4%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M+R L HV T A + K L GKQ+H + I GY + N L++ YSKC
Sbjct: 1 MLRDTNALAHVIQTYAKT-----KRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGE 55
Query: 210 TGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
A K+F M RN++SWT MIS +A+ F MR+ G P F I A
Sbjct: 56 LDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRA 115
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+ ++ G+ +H L +K SE V + L MY++ +M D+ KVF+E+ C++ +SW
Sbjct: 116 CASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSW 175
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
A+I GY++ G A+ AF +I E + + S L A GA + + K G+ HS +
Sbjct: 176 TAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALK--ACKFGRSVHSSV 233
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN-ETQEKSEFAWTAIISALARHGDYESV 442
+K+G +SD VG+AL DMY K G + + VF +++ ++ ++T +I E
Sbjct: 234 VKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKG 293
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
++ F E+ +G+ P+ TF S++ C + +G L ++K + + P S +VD
Sbjct: 294 LSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK-INFDEDPFVSSILVD 352
Query: 503 MLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG----NVEMGERIAD 550
M G+ G LE+A + +I G P SL+ HG +++ ER+ D
Sbjct: 353 MYGKCGLLEQAIQAFDEI-GDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVD 403
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/645 (33%), Positives = 357/645 (55%), Gaps = 16/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M+ + G A +F + ++ SWN ++ G+ K+ D+AL RM +GV D
Sbjct: 148 LSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDV 207
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L C + G ++H ++++G +S+V V NALITMY + G + AR VFD+
Sbjct: 208 YTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDK 267
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MPN+D +SWNA++SGY ++G +E + M++ + D ++ TS +AC + L
Sbjct: 268 MPNRDRISWNAMISGYFENG-VCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRL 326
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+QIHG ++ +G S+ N L+ YS + +A VF R R+++SWT MIS
Sbjct: 327 GRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYEN 386
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + A+ +K M +G+ P+++T ++ A S + G +H + + +S V
Sbjct: 387 CLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIV 446
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N LI MYA+ + + + ++F + I+SW ++I G N A+ F +I+ K
Sbjct: 447 ANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRRLK 506
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI-FES 411
PN+ T VL+A A +L G+ H+H ++ G+ D + +A+LDMY + G + +
Sbjct: 507 PNSVTLVCVLSA--CARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAW 564
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
++ F+ E + +W +++ A G F+ M V P+ +TF+S+L C R+
Sbjct: 565 KQFFSVDHEVT--SWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRS 622
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
GM+ +G F+SM Y I P+ HY+C+VD+LGR G+LEEA E + ++P P +V +
Sbjct: 623 GMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGA 682
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL +CRIH +VE+GE A+ + + + G Y+L+SNLYA+ G W+ VA +RK M+ G+
Sbjct: 683 LLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGL 742
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ G SW +V +H F S DN HP+ +EI + E +MK
Sbjct: 743 IVDPGCSWVEVKGT--VHAFLSSDNFHPQIKEINALLERFYKKMK 785
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 152/502 (30%), Positives = 255/502 (50%), Gaps = 19/502 (3%)
Query: 21 NNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
+NP+ + L G D A+S+ M+ + + + Y + C G +++
Sbjct: 72 HNPNSHIYQLCLLG--NLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVY 129
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
S + + +GNAL++M+ R+G LV+A VF M ++ SWN ++ GY + G +
Sbjct: 130 SYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFD 189
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EA+ M+ G++ D +F CG NL G++IH I+ G+ + V V N L
Sbjct: 190 -EALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNAL 248
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEMRLDG------VCPN 254
++ Y KC A VF +M +R+ ISW MIS E+ V L + +RL G V P+
Sbjct: 249 ITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCL-EGLRLFGMMIKYPVDPD 307
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
+T +I A + + GR IHG ++T F +PS+ N LI MY+ ++++E VF
Sbjct: 308 LMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFS 367
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISL 373
CR+++SW A+ISGY + A++ + + E P+ T VL+A ++ +
Sbjct: 368 RTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDM 427
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
G H + GL S IV ++L+DMY K I ++ +F+ T EK+ +WT+II L
Sbjct: 428 --GMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGL 485
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
+ + F+EM + ++P+S+T + VL+ C R G + G+ + L+ S
Sbjct: 486 RINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALR---TGVS 541
Query: 494 PDHY--SCMVDMLGRVGRLEEA 513
D + + ++DM R GR+E A
Sbjct: 542 FDGFMPNAILDMYVRCGRMEYA 563
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
K G R +S++ +G+ALL M+ + G++ ++ VF ++++ F+W ++
Sbjct: 123 KEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGY 182
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
A+ G ++ ++ + M GV+PD TF VL CG + +GR + +++ Y E
Sbjct: 183 AKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIR-YGFESD 241
Query: 494 PDHYSCMVDMLGRVGRLEEAEELVGQIPG------------------------------- 522
D + ++ M + G + A + ++P
Sbjct: 242 VDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIK 301
Query: 523 ---GPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
P L + S++ AC + G+ +G +I +++ E
Sbjct: 302 YPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTE 338
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/638 (33%), Positives = 342/638 (53%), Gaps = 17/638 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y K D A +F+ ++ + SW +++G ++ D F M G+ D Y
Sbjct: 115 YSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAY 174
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S L C+ + G +H+ IV G S +V AL+ MY++ + ++ +VF+ M
Sbjct: 175 SGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE 234
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+ VSWNA+++G+T + Y ++A + MM +G+ D +F A A G +++ K+
Sbjct: 235 VNVVSWNAMITGFTSNDLY-LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKE 293
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR--MHDRNVISWTTMISMN--- 235
+ G ++++G ++ VG L+ SKC +A +F + R W MIS
Sbjct: 294 VSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRS 353
Query: 236 --REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF-LSEPSV 292
E A+ LF +M + + + T+ + +AI+ + G+ +H IK+ ++ S+
Sbjct: 354 GFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSI 413
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N + YA+ S++D KVF+ + R++ISW +L++ Y+Q A++ F + E
Sbjct: 414 SNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGI 473
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
PN +TF SVL V A L++GQ+ H I KVGLD D + SAL+DMY K G + ++
Sbjct: 474 APNQFTFSSVL--VSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDA 531
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
++VFN +WTAII+ A+HG + + F+ M GV P+++TFL VL C
Sbjct: 532 KKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHG 591
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G F M K Y + P +HY+C+VD+L RVG L +A E + ++P P V Q+
Sbjct: 592 GLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQT 651
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGACR+HGNVE+GE A ++ + S +YVL+SN Y E G ++ LR MK +GV
Sbjct: 652 LLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGV 711
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
+KE G SW V LH F +GD HP ++IY E
Sbjct: 712 KKEPGCSWISVNGT--LHKFYAGDQQHPEKDKIYAKLE 747
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 243/458 (53%), Gaps = 25/458 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K + + + +FN + ++VSWN +++GF +D DA LRM GV DA
Sbjct: 213 LNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDA 272
Query: 58 VTY---STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
T+ + A+ D ++ ++ G+DS VG ALI M S+ G L EAR +
Sbjct: 273 QTFIGVAKAIGMLRDVNK---AKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSI 329
Query: 115 FDE--MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
F+ + + + WNA++SGY + G + +A+ +M + + LDH ++ S +A
Sbjct: 330 FNSHFITCRFNAPWNAMISGYLRSG-FNEKALELFAKMCQNDIYLDHYTYCSVFNAIAAL 388
Query: 173 KNLELGKQIHGVSIKMGYGT-HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
K L LGK++H +IK G +VS+ N + + Y+KC D KVF RM DR++ISWT++
Sbjct: 389 KCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSL 448
Query: 232 ISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
++ + A+ +F MR +G+ PN TF ++ + + L++ G+ +HG+ K
Sbjct: 449 VTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGL 508
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ + + L+ MYA+ + D++KVF+ +S + +SW A+I+G+AQ+G+ A+Q F
Sbjct: 509 DMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRR 568
Query: 347 VIKES-KPNAYTFGSVLNAV--GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+++ +PNA TF VL A G + L++ + GL + + ++D+
Sbjct: 569 MVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKK---TYGLVPEMEHYACIVDLLS 625
Query: 404 KRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ G + ++ + E +E W ++ A HG+ E
Sbjct: 626 RVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVE 663
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 252/493 (51%), Gaps = 26/493 (5%)
Query: 67 CLDHEGFLFGLQLHSLIVK--FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
C+D +H ++K F + + N + YS+ + A R+FD+M +++
Sbjct: 78 CVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTF 137
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
SW +++G ++G + ++ EM +G+ D +++ C ++ELG +H
Sbjct: 138 SWTVLIAGLAENGLF-LDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQ 196
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DA 239
+ G+ +H V L++ Y+K + D+ KVF M + NV+SW MI+ DA
Sbjct: 197 IVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDA 256
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
LF M +GV P+ TFIG+ AI + V + + + G ++ S V LI M
Sbjct: 257 FDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDM 316
Query: 300 YARFESMQDSEKVFDE--LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
++ S+Q++ +F+ ++CR WNA+ISGY ++G + A++ F + + + Y
Sbjct: 317 NSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHY 376
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVF 415
T+ SV NA+ A + +SL G++ H+ IK GL+ + + + +A+ + Y K GS+ + ++VF
Sbjct: 377 TYCSVFNAIAALKCLSL--GKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVF 434
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
N +++ +WT++++A ++ +++ + F M +G+ P+ TF SVL C ++
Sbjct: 435 NRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLE 494
Query: 476 KGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+ + + K D IE S +VDM + G L +A+++ +I +S
Sbjct: 495 YGQQVHGIICKVGLDMDKCIE------SALVDMYAKCGCLGDAKKVFNRISNADTVSWTA 548
Query: 531 SLLGACRIHGNVE 543
+ G + HG V+
Sbjct: 549 IIAGHAQ-HGIVD 560
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/646 (33%), Positives = 358/646 (55%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+N+Y K G D A+ +F+ L + V+W V++G+ + AL +M L GV D
Sbjct: 156 INLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDR 215
Query: 58 VTYSTALSFCLDHEGFLFG-LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++A+S C GFL G Q H + ++++ V NALI +Y + RL AR++FD
Sbjct: 216 FVLASAVSAC-SALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFD 274
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M N++ VSW +++GY Q+ EA+ ++ ++G + D + S ++CG +
Sbjct: 275 CMENRNLVSWTTMIAGYMQN-SCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIW 333
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+Q+H +IK + V N L+ Y+KCE +A VF + + + IS+ MI
Sbjct: 334 QGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYS 393
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ A+ +F +MR + P+ +TF+ L+ S + ++ + IHGL +K+ +
Sbjct: 394 RLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLY 453
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
+ LI +Y++F ++D++ VF+ + R+++ WNA+I G AQN AV+ F + +
Sbjct: 454 AGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSG 513
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
PN +TF +++ A+ +S+ HGQ+ H+ IIK G DSD V +AL+DMY K G I E
Sbjct: 514 LAPNEFTFVALVTV--ASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKE 571
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ +F T K W ++IS A+HG E + F+ M GV P+ +TF+ VL+ C
Sbjct: 572 GRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAH 631
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G FD M Y IEP +HY+ +V++ GR G+L A+E + ++P P +V +
Sbjct: 632 AGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWR 691
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLL AC + GNVE+G + + +PA SG VLMSN+YA +G W LR+GM G
Sbjct: 692 SLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAG 751
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V KE G+SW +V + +H F + HP ++ IY + + L S +K
Sbjct: 752 VVKEPGYSWIEV--MKEVHTFIARGREHPEADVIYSLLDELTSILK 795
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 168/559 (30%), Positives = 284/559 (50%), Gaps = 26/559 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS-----GFEKSDDALSFALRMNLIGVVF 55
+ Y K G+ A +F+ + + ++VSW + +S G E+ AL A + G
Sbjct: 53 LRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAP 112
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ ++AL C FG Q+H + V+ GLD VYVG ALI +Y++ G + A VF
Sbjct: 113 NEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVF 172
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D +P K+ V+W A+++GY+Q G GV A+ +M G+R D SA SAC L
Sbjct: 173 DALPVKNPVTWTAVITGYSQIGQGGV-ALELFGKMGLDGVRPDRFVLASAVSACSALGFL 231
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E G+Q HG + ++ T SV N L+ Y KC A K+F M +RN++SWTTMI+
Sbjct: 232 EGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGY 291
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A+++F ++ +G P+ ++++ + +GR +H IK N S+
Sbjct: 292 MQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDE 351
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N LI MYA+ E + ++ VF+ L+ + IS+NA+I GY++ G A+ F +
Sbjct: 352 YVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYC 411
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
S KP+ TF S+L + I L ++ H I+K G D GS+L+D+Y K +
Sbjct: 412 SLKPSPLTFVSLLGVSSSQSAIELS--KQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVE 469
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++ VFN + W A+I LA++ E + F +++ G+ P+ TF++++TV
Sbjct: 470 DAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVAS 529
Query: 470 RNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
+ G+ ++K D+H+ + ++DM + G ++E L+ + G
Sbjct: 530 TLVSMFHGQQFHAQIIKAGADSDHHVS------NALIDMYAKCGFIKEG-RLLFESTLGK 582
Query: 525 GLSVLQSLLGACRIHGNVE 543
+ S++ HG E
Sbjct: 583 DVICWNSMISTYAQHGQAE 601
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 231/446 (51%), Gaps = 14/446 (3%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG-D 138
H+ V G ++++ N L+ YS+ GR+ +ARR+FD MP+K+ VSW + +S + Q G +
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
A+ A + G + SA AC + + G+Q+HGV++++G +V VG
Sbjct: 94 EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCP 253
L++ Y+K A VF + +N ++WT +I+ + A+ LF +M LDGV P
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+ + A S ++ GR HG + ++ SV N LI +Y + + + K+F
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
D + R ++SW +I+GY QN A+ F+ + +E +P+ + S+LN+ G+ I
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAI- 332
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
G++ H+H IK L+SD V ++L+DMY K + E++ VF E ++ A+I
Sbjct: 333 -WQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEG 391
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
+R GD ++ F +M ++P +TF+S+L V I + + ++K
Sbjct: 392 YSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKS---GT 448
Query: 493 SPDHY--SCMVDMLGRVGRLEEAEEL 516
S D Y S ++D+ + +E+A+ +
Sbjct: 449 SLDLYAGSSLIDVYSKFSLVEDAKAV 474
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 6/244 (2%)
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
+ H + T L + + N L+ Y++ ++D+ ++FD + + ++SW + IS +AQ+G
Sbjct: 32 LAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHG 91
Query: 336 LSLAAVQAFFGVIKES---KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
AV F + S PN + S L A + +S GQ+ H +++GLD +
Sbjct: 92 CEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSF--GQQVHGVAVRIGLDGNV 149
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
VG+AL+++Y K G I + VF+ K+ WTA+I+ ++ G + F +M
Sbjct: 150 YVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLD 209
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
GVRPD S ++ C G + GR + +E + ++D+ + RL
Sbjct: 210 GVRPDRFVLASAVSACSALGFLEGGRQTHGYAYR-IAVETDASVINALIDLYCKCSRLSL 268
Query: 513 AEEL 516
A +L
Sbjct: 269 ARKL 272
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/638 (33%), Positives = 342/638 (53%), Gaps = 17/638 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y K D A +F+ ++ + SW +++G ++ D F M G+ D Y
Sbjct: 115 YSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAY 174
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S L C+ + G +H+ IV G S +V AL+ MY++ + ++ +VF+ M
Sbjct: 175 SGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE 234
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+ VSWNA+++G+T + Y ++A + MM +G+ D +F A A G +++ K+
Sbjct: 235 VNVVSWNAMITGFTSNDLY-LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKE 293
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR--MHDRNVISWTTMISMN--- 235
+ G ++++G ++ VG L+ SKC +A +F + R W MIS
Sbjct: 294 VSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRS 353
Query: 236 --REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF-LSEPSV 292
E A+ LF +M + + + T+ + +AI+ + G+ +H IK+ ++ S+
Sbjct: 354 GFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSI 413
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N + YA+ S++D KVF+ + R++ISW +L++ Y+Q A++ F + E
Sbjct: 414 SNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGI 473
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
PN +TF SVL V A L++GQ+ H I KVGLD D + SAL+DMY K G + ++
Sbjct: 474 APNQFTFSSVL--VSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDA 531
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
++VFN +WTAII+ A+HG + + F+ M GV P+++TFL VL C
Sbjct: 532 KKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHG 591
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G F M K Y + P +HY+C+VD+L RVG L +A E + ++P P V Q+
Sbjct: 592 GLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQT 651
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGACR+HGNVE+GE A ++ + S +YVL+SN Y E G ++ LR MK +GV
Sbjct: 652 LLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGV 711
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
+KE G SW V LH F +GD HP ++IY E
Sbjct: 712 KKEPGCSWISVNGT--LHKFYAGDQQHPEKDKIYAKLE 747
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 243/458 (53%), Gaps = 25/458 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K + + + +FN + ++VSWN +++GF +D DA LRM GV DA
Sbjct: 213 LNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDA 272
Query: 58 VTY---STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
T+ + A+ D ++ ++ G+DS VG ALI M S+ G L EAR +
Sbjct: 273 QTFIGVAKAIGMLRDVNK---AKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSI 329
Query: 115 FDE--MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
F+ + + + WNA++SGY + G + +A+ +M + + LDH ++ S +A
Sbjct: 330 FNSHFITCRFNAPWNAMISGYLRSG-FNEKALELFAKMCQNDIYLDHYTYCSVFNAIAAL 388
Query: 173 KNLELGKQIHGVSIKMGYGT-HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
K L LGK++H +IK G +VS+ N + + Y+KC D KVF RM DR++ISWT++
Sbjct: 389 KCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSL 448
Query: 232 ISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
++ + A+ +F MR +G+ PN TF ++ + + L++ G+ +HG+ K
Sbjct: 449 VTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGL 508
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ + + L+ MYA+ + D++KVF+ +S + +SW A+I+G+AQ+G+ A+Q F
Sbjct: 509 DMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRR 568
Query: 347 VIKES-KPNAYTFGSVLNAV--GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+++ +PNA TF VL A G + L++ + GL + + ++D+
Sbjct: 569 MVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKK---TYGLVPEMEHYACIVDLLS 625
Query: 404 KRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ G + ++ + E +E W ++ A HG+ E
Sbjct: 626 RVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVE 663
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 252/493 (51%), Gaps = 26/493 (5%)
Query: 67 CLDHEGFLFGLQLHSLIVK--FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
C+D +H ++K F + + N + YS+ + A R+FD+M +++
Sbjct: 78 CVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTF 137
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
SW +++G ++G + ++ EM +G+ D +++ C ++ELG +H
Sbjct: 138 SWTVLIAGLAENGLF-LDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQ 196
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DA 239
+ G+ +H V L++ Y+K + D+ KVF M + NV+SW MI+ DA
Sbjct: 197 IVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDA 256
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
LF M +GV P+ TFIG+ AI + V + + + G ++ S V LI M
Sbjct: 257 FDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDM 316
Query: 300 YARFESMQDSEKVFDE--LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
++ S+Q++ +F+ ++CR WNA+ISGY ++G + A++ F + + + Y
Sbjct: 317 NSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHY 376
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVF 415
T+ SV NA+ A + +SL G++ H+ IK GL+ + + + +A+ + Y K GS+ + ++VF
Sbjct: 377 TYCSVFNAIAALKCLSL--GKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVF 434
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
N +++ +WT++++A ++ +++ + F M +G+ P+ TF SVL C ++
Sbjct: 435 NRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLE 494
Query: 476 KGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+ + + K D IE S +VDM + G L +A+++ +I +S
Sbjct: 495 YGQQVHGIICKVGLDMDKCIE------SALVDMYAKCGCLGDAKKVFNRISNADTVSWTA 548
Query: 531 SLLGACRIHGNVE 543
+ G + HG V+
Sbjct: 549 IIAGHAQ-HGIVD 560
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/611 (35%), Positives = 342/611 (55%), Gaps = 18/611 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDA 57
+N+Y K+G+ D A+ +F+ L + V+W V++G+ ++ A L RM L GV D
Sbjct: 179 VNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDR 238
Query: 58 VTYSTALSFCLDHEGFLF---GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
++A S C G F G Q+H + +S+ V NALI +Y + RL+ ARR+
Sbjct: 239 FVLASAASAC---SGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRL 295
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD M N++ VSW +++GY Q+ EA+ ++ + G + D + TS ++CG
Sbjct: 296 FDSMENRNLVSWTTMIAGYMQN-SLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAA 354
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
+ G+Q+H IK + V N L+ Y+KCE +A VF + + + IS+ MI
Sbjct: 355 IWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEG 414
Query: 235 -----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ AV +F +MR + P+ +TF+ L+ S + ++ + IHGL +K+ +
Sbjct: 415 YARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLD 474
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-I 348
+ LI +Y++F + D++ VF + R+++ WNA+I G AQN AV+ F + +
Sbjct: 475 LYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRV 534
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
PN +TF +++ A+ S+ HGQ+ H+ IIK G DSDP + +AL+DMY K G I
Sbjct: 535 SGLTPNEFTFVALVTV--ASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFI 592
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E + +F T K W ++IS A+HG E ++ F ME GV P+ +TF+SVL+ C
Sbjct: 593 EEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSAC 652
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +G H F+SM Y +EP +HY+ +V++ GR G+L A+E + ++P P ++
Sbjct: 653 AHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATI 712
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+SLL AC + GNVE+G + + +PA SG VLMSN+YA KG W LR+GM
Sbjct: 713 WRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASKGLWADAQKLRQGMDC 772
Query: 589 KGVRKEVGFSW 599
GV KE G+SW
Sbjct: 773 AGVVKEPGYSW 783
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/557 (30%), Positives = 285/557 (51%), Gaps = 24/557 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVF----- 55
Y K G+ A +F+++ + ++VSW + +S + + DDAL G
Sbjct: 75 YSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEP 134
Query: 56 -DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ ++AL C FG Q+H + K GLD+ V+VG AL+ +Y++ GR+ A V
Sbjct: 135 PNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSV 194
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD +P ++ V+W A+++GY+Q G GV A+ M G+R D SAASAC
Sbjct: 195 FDALPARNPVTWTAVITGYSQAGQAGV-ALELFGRMGLDGVRPDRFVLASAASACSGLGF 253
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
+E G+QIHG + + + SV N L+ Y KC A ++F M +RN++SWTTMI
Sbjct: 254 VEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAG 313
Query: 233 ----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
S++ E A+S+F ++ G P+ ++++ + +GR +H IK + S
Sbjct: 314 YMQNSLDTE-AMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLES 372
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ V N LI MYA+ E + ++ VF+ L+ + IS+NA+I GYA+ G AV+ FG +
Sbjct: 373 DEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVE-IFGKM 431
Query: 349 K--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ KP+ TF S+L + D+ L ++ H I+K G D GSAL+D+Y K
Sbjct: 432 RYCSLKPSLLTFVSLLGVSSSRSDLELS--KQIHGLIVKSGTSLDLYAGSALIDVYSKFS 489
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ +++ VF+ Q + W A+I LA++ E + F + G+ P+ TF++++T
Sbjct: 490 LVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVT 549
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
V I G+ ++K + P + ++DM + G +EE L+ + G +
Sbjct: 550 VASTLASIFHGQQFHAQIIKA-GADSDPHISNALIDMYAKCGFIEEG-RLLFESTLGKDV 607
Query: 527 SVLQSLLGACRIHGNVE 543
S++ HG+ E
Sbjct: 608 ICWNSMISTYAQHGHAE 624
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 228/449 (50%), Gaps = 20/449 (4%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H+ V GL ++++ N L+ YS+ GRL +ARR+FD MP+++ VSW + +S Y Q G
Sbjct: 53 HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112
Query: 140 GVEAILALIEMMRKGLR------LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
+A+L G + SA AC + G+Q+HGV+ K+G +
Sbjct: 113 D-DALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDAN 171
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRL 248
V VG L++ Y+K A VF + RN ++WT +I+ + A+ LF M L
Sbjct: 172 VFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGL 231
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
DGV P+ A S V+ GR IHG +T S+ SV N LI +Y + +
Sbjct: 232 DGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLL 291
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGA 367
+ ++FD + R ++SW +I+GY QN L A+ F+ + + +P+ + S+LN+ G+
Sbjct: 292 ARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGS 351
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
I G++ H+H+IK L+SD V +AL+DMY K + E++ VF E ++
Sbjct: 352 LAAI--WQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYN 409
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
A+I AR GD + F +M ++P +TF+S+L V + + + ++K
Sbjct: 410 AMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKS 469
Query: 488 YHIEPSPDHY--SCMVDMLGRVGRLEEAE 514
S D Y S ++D+ + +++A+
Sbjct: 470 ---GTSLDLYAGSALIDVYSKFSLVDDAK 495
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/639 (33%), Positives = 358/639 (56%), Gaps = 25/639 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N KSG+ AL +F+ + ++V+W +V+SG+ ++ + AL+ M GV +
Sbjct: 55 LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPND 114
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ AL C D G Q+HSL V+ G + ++G+ LI MYSR G L A+ VFD
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + D V + +++S + ++G++ + A ALI+M+++GL+ + + T+ +AC L
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAA-EALIQMLKQGLKPNEHTMTTILTACPRV----L 229
Query: 178 GKQIHGVSIK-MGYGTH-VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
G+QIHG IK +G + V L+ YS+ A VF +H +NV+SW +M+ +
Sbjct: 230 GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLY 289
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSE 289
E+A+ +F +M +GV PN+ ++ A SIG GR +H IK + +++
Sbjct: 290 IRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG----LGRQLHCSAIKHDLITD 345
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V N L++MY R +++ E + +++ +++SW IS QNG A+ +
Sbjct: 346 IRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHS 405
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E PN Y F SVL++ A+ SL G + H +K+G DS+ G+AL++MY K G +
Sbjct: 406 EGFTPNGYAFSSVLSSC--ADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 463
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ F+ +W ++I A+HGD + F +M + G++PD TFL VL C
Sbjct: 464 GSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGC 523
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+GM+ +G F M+ Y P+P HY+CM+DMLGR GR +EA ++ +P P +
Sbjct: 524 NHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALI 583
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
++LL +C++H N+++G+ AD LM++ S SYVLMSN+YA G+WE +R+ M
Sbjct: 584 WKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDE 643
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
GV+K+ G SW ++ + +H F+S D +HP S+ IY+M
Sbjct: 644 TGVKKDAGCSWIEIN--NEVHTFASRDMSHPNSDSIYQM 680
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D ++ L+ K G + ++ +F+ K+ AWT+++S R+G E+ + F +M
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVG 508
GV P+ + L C G + G + ++ + D + SC+++M R G
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGF---AGDAWIGSCLIEMYSRCG 163
Query: 509 RLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
L A+E+ ++ P + SL+ A +G E+ A+AL++M G
Sbjct: 164 SLPAAKEVFDRM-DSPDVVGYTSLISAFCRNGEFELA---AEALIQMLKQG 210
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/656 (32%), Positives = 351/656 (53%), Gaps = 79/656 (12%)
Query: 56 DAVTYSTALSFCLDHE-GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D+ ++ L C+ + ++ +H+ ++K G +E+++ N LI YS+ G L + R+V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 115 FDEMPNKDSVSWNAILSGYTQDG------------------------------DYGVEAI 144
FD+MP ++ +WN++++G T+ G D EA+
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 145 LALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTY 204
M ++G L+ SF S SAC ++ G Q+H + K + + V +G+ L+ Y
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 205 SKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFI 259
SKC DA +VF M DRNV+SW ++I+ + +A+ +F+ M V P++VT
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFL-SEPSVCNCLITMYARFESMQDSEKVFDELSC 318
+I A + + +K G+ +HG +K + L ++ + N + MYA+ ++++ +FD +
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 319 REII-------------------------------SWNALISGYAQNGLSLAAVQAFFGV 347
R +I SWNALI+GY QNG + A+ F +
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 348 IKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL------DSDPIVGSALLD 400
+ES P Y+F ++L A ++ L G + H H++K G + D VG++L+D
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHL--GMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K G + E VF + E+ +W A+I A++G + F+EM G +PD IT
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ VL+ CG G + +GRH F SM +D+ + P DHY+CMVD+LGR G LEEA+ ++ ++
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVA 580
P P + SLL AC++H N+ +G+ +A+ L+++EP+ SG YVL+SN+YAE G WE V
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615
Query: 581 ILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+RK M+ +GV K+ G SW + D H F D +HPR ++I+ + + L +EM+
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHD--HVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/555 (26%), Positives = 262/555 (47%), Gaps = 87/555 (15%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYST 62
K G D+A +F ++ D +WN+++SGF + D +AL + M+ G V + ++++
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
LS C G+Q+HSLI K S+VY+G+AL+ MYS+ G + +A+RVFDEM +++
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSWN++++ + Q+G VEA+ M+ + D V+ S SAC +++G+++H
Sbjct: 218 VVSWNSLITCFEQNGP-AVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 183 GVSIKMG-YGTHVSVGNVLMSTYSKCE-------------------------------VT 210
G +K + + N + Y+KC T
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336
Query: 211 GDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHA- 264
A +F +M +RNV+SW +I+ E+A+SLF ++ + VCP +F ++ A
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 265 -----ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
+ +G + HG ++ + V N LI MY + +++ VF ++ R
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQR 378
+ +SWNA+I G+AQNG A++ F +++ KP+ T VL+A G
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG------------ 504
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H+ ++ G R R F + + T ++ L R G
Sbjct: 505 -HAGFVEEG-----------------RHYFSSMTRDFGVAPLRDHY--TCMVDLLGRAGF 544
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD-HY 497
E + +EM ++PDS+ + S+L C + I G+++ + +L+ +EPS Y
Sbjct: 545 LEEAKSMIEEMP---MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE---VEPSNSGPY 598
Query: 498 SCMVDMLGRVGRLEE 512
+ +M +G+ E+
Sbjct: 599 VLLSNMYAELGKWED 613
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 181/379 (47%), Gaps = 51/379 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G + A +F+ + + ++VSWN++++ FE++ +AL M V D
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDE 253
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT ++ +S C G ++H +VK L +++ + NA + MY++ R+ EAR +FD
Sbjct: 254 VTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD 313
Query: 117 EMP-------------------------------NKDSVSWNAILSGYTQDGDYGVEAIL 145
MP ++ VSWNA+++GYTQ+G+ EA+
Sbjct: 314 SMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE-NEEALS 372
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI------HGVSIKMGYGTHVSVGNV 199
+ R+ + H SF + AC L LG Q HG + G + VGN
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMRLDGVCPN 254
L+ Y KC + VFR+M +R+ +SW MI + N +A+ LF+EM G P+
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD 492
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP--SVCNCLITMYARFESMQDSEKV 312
+T IG++ A V+EGR + +F P C++ + R +++++ +
Sbjct: 493 HITMIGVLSACGHAGFVEEGRHYFS-SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSM 551
Query: 313 FDELSCR-EIISWNALISG 330
+E+ + + + W +L++
Sbjct: 552 IEEMPMQPDSVIWGSLLAA 570
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/623 (35%), Positives = 351/623 (56%), Gaps = 23/623 (3%)
Query: 29 NTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLF----GLQLHS 81
N +L F ++D +AL+ L + G D + S L C G LF G Q+H
Sbjct: 61 NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVC----GCLFDRIVGKQVHC 116
Query: 82 LIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGV 141
+K G +V VG +L+ MY + + + RVFDEM K+ VSW ++L+GY Q+G
Sbjct: 117 QCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG-LNE 175
Query: 142 EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLM 201
+A+ +M +G++ + +F + + +E G Q+H + IK G + + VGN ++
Sbjct: 176 QALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMV 235
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEMRLDGVCPNDV 256
+ YSK + DA VF M +RN +SW +MI+ N D A LF MRL+GV
Sbjct: 236 NMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQT 295
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
F +I + + + +H IK + ++ L+ Y++ + D+ K+F +
Sbjct: 296 IFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMM 355
Query: 317 -SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISL 373
+ ++SW A+ISGY QNG + A+ F + +E +PN +TF SVLNA AA S+
Sbjct: 356 HGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNAC-AAPTASV 414
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
+ G++ HS IK G + V SAL+ MY KRG+I + VF ++ +W ++IS
Sbjct: 415 EQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGY 474
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
A+HG + + F+EM +K + D ITF+ V++ C G++++G+ FD M+KDYHI P+
Sbjct: 475 AQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPT 534
Query: 494 PDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALM 553
+HYSCMVD+ R G LE+A +L+ ++P G ++ ++LL ACR+H NV++GE A+ L+
Sbjct: 535 MEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLI 594
Query: 554 KMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSS 613
++P S +YVL+SN+YA G+W+ A +RK M K V+KE G+SW +V + F +
Sbjct: 595 SLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVK--NKTFSFMA 652
Query: 614 GDNTHPRSEEIYRMAECLGSEMK 636
GD +HP+S+ IY E L +K
Sbjct: 653 GDLSHPQSDRIYLKLEELSIRLK 675
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 247/451 (54%), Gaps = 19/451 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K+ + +F+ + ++VSW ++L+G+ + ++ AL +M L G+ +
Sbjct: 134 VDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNP 193
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L G+Q+H++++K GLDS ++VGN+++ MYS+ + +A+ VFD
Sbjct: 194 FTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDS 253
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M N+++VSWN++++G+ +G +EA M +G++L F + C + K +
Sbjct: 254 MENRNAVSWNSMIAGFVTNG-LDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSF 312
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS--- 233
KQ+H IK G +++ LM YSKC DA K+F MH +NV+SWT +IS
Sbjct: 313 AKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYV 372
Query: 234 -MNRED-AVSLFKEMRL-DGVCPNDVTFIGLIHAISIGNL-VKEGRMIHGLCIKTNFLSE 289
R D A++LF +MR +GV PN+ TF +++A + V++G+ H IK+ F +
Sbjct: 373 QNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNA 432
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-I 348
V + L+TMYA+ +++ + +VF R+++SWN++ISGYAQ+G +++ F +
Sbjct: 433 LCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRS 492
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRG 406
K + + TF V++A A ++ GQR ++K P + S ++D+Y + G
Sbjct: 493 KNLELDGITFIGVISACTHAGLVN--EGQRYFDLMVK-DYHIVPTMEHYSCMVDLYSRAG 549
Query: 407 SIFESQRVFNETQ-EKSEFAWTAIISALARH 436
+ ++ + N+ W +++A H
Sbjct: 550 MLEKAMDLINKMPFPAGATIWRTLLAACRVH 580
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGA 367
S+++FDE + + N L+ +++N + A+ F G+ + P + + VL G
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
D + G++ H IK G D VG++L+DMY K S+ + +RVF+E + K+ +WT
Sbjct: 105 LFDRIV--GKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWT 162
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
++++ ++G E + F +M+ +G++P+ TF +VL +G + KG + ++K
Sbjct: 163 SLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK 221
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/654 (32%), Positives = 365/654 (55%), Gaps = 24/654 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ +Y + G A IF+ ++ D +S+N+++SG + SD AL +M L + D
Sbjct: 255 VTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDC 314
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT ++ LS C G QLHS ++K G+ S++ + +L+ +Y + + A F
Sbjct: 315 VTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLT 374
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
++ V WN +L Y Q G+ E+ ++M +GL + ++ S C L+L
Sbjct: 375 TETENVVLWNVMLVAYGQLGNLS-ESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDL 433
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+QIH IK G+ +V V +VL+ Y+K A + +R+ + +V+SWT MI+ +
Sbjct: 434 GEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQ 493
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF+EM G+ +++ F I A + + +G+ IH + + + S+
Sbjct: 494 HDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSI 553
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+++YAR QD+ F+++ ++ ISWNALISG+AQ+G A+Q F + +
Sbjct: 554 GNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGV 613
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ N +TFGS ++A +I K G++ H+ +IK G DS+ + L+ +Y K GSI ++
Sbjct: 614 EANLFTFGSAVSATANTANI--KQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDA 671
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+R F E EK+ +W A+I+ ++HG ++ F+EM+ G+ P+ +TF+ VL+ C
Sbjct: 672 KREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHV 731
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++++G F SM K++ + P P+HY C+VD+LGR L A E + ++P P + ++
Sbjct: 732 GLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRT 791
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL AC +H N+E+GE A L+++EP S +YVL+SN+YA G W+ R+ MK +GV
Sbjct: 792 LLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGV 851
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
+KE G SW +V + +H F GD HP +E+IY +Y++ ERA
Sbjct: 852 KKEPGRSWIEVK--NSIHAFFVGDRLHPLAEQIY----------EYIDDLNERA 893
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 265/530 (50%), Gaps = 13/530 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K+G D A +F L D VSW ++SG ++ D+A+ +M+ V+
Sbjct: 154 IDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTP 213
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+S+ LS C E F G QLH IVK+GL SE +V NAL+T+YSRWG L+ A ++F +
Sbjct: 214 YVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSK 273
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D +S+N+++SG Q G + A+ +M ++ D V+ S SAC
Sbjct: 274 MHRRDRISYNSLISGLAQRG-FSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYK 332
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GKQ+H IKMG + + + L+ Y KC A++ F NV+ W M+
Sbjct: 333 GKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQ 392
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++ +F +M+++G+ PN T+ ++ + + G IH IK+ F V
Sbjct: 393 LGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYV 452
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
C+ LI MYA+ + + + L +++SW A+I+GY Q+ L A++ F + +
Sbjct: 453 CSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGI 512
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ + F S ++A + +L GQ+ H+ G D +G+AL+ +Y + G ++
Sbjct: 513 RSDNIGFSSAISACAGIQ--ALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDA 570
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
F + K +W A+IS A+ G E + F +M GV + TF S ++
Sbjct: 571 YLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANT 630
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
I +G+ + M+K + + + + ++ + + G +E+A+ ++P
Sbjct: 631 ANIKQGKQIHAMMIKTGY-DSETEASNVLITLYSKCGSIEDAKREFFEMP 679
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 269/524 (51%), Gaps = 16/524 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+++Y G+ D A+ +F+++ + ++ WN V+SG + + L M V D
Sbjct: 52 IDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDE 111
Query: 58 VTYSTALSFCLDHEG-FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+++ L C + F Q+H+ I+ G S V N LI +YS+ G + A+ VF+
Sbjct: 112 STFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFE 171
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ KDSVSW A++SG +Q+G EAIL +M + + F+S SAC + +
Sbjct: 172 RLFLKDSVSWVAMISGLSQNGRED-EAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFK 230
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--M 234
LG+Q+HG +K G + V N L++ YS+ A ++F +MH R+ IS+ ++IS
Sbjct: 231 LGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLA 290
Query: 235 NR---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
R + A+ LF++M+LD + P+ VT L+ A + +G+ +H IK S+
Sbjct: 291 QRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLI 350
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
+ L+ +Y + ++ + + F ++ WN ++ Y Q G + F + I+
Sbjct: 351 IEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEG 410
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
PN YT+ S+L + + L G++ H+ +IK G + V S L+DMY K G +
Sbjct: 411 LMPNQYTYPSILRTCTSLGALDL--GEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDT 468
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ + +E+ +WTA+I+ +H + + F+EMEN+G+R D+I F S ++ C
Sbjct: 469 ARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAG 528
Query: 471 NGMIHKGRHLF-DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+++G+ + S + Y + S + +V + R GR ++A
Sbjct: 529 IQALNQGQQIHAQSYISGYSEDLSIG--NALVSLYARCGRAQDA 570
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 145/482 (30%), Positives = 242/482 (50%), Gaps = 23/482 (4%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
G+ + TY C + L +LH+ I K G D E +G+ LI +Y G + A
Sbjct: 5 GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASAC- 169
++FD++P+ + WN ++SG +L L +M + + D +F S AC
Sbjct: 65 IKLFDDIPSSNVSFWNKVISGLL--AKKLASQVLGLFSLMITENVTPDESTFASVLRACS 122
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
G + ++ +QIH I G+G+ V N L+ YSK A VF R+ ++ +SW
Sbjct: 123 GGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWV 182
Query: 230 TMIS----MNRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
MIS RED A+ LF +M V P F ++ A + L K G +HG +K
Sbjct: 183 AMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKW 242
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
SE VCN L+T+Y+R+ ++ +E++F ++ R+ IS+N+LISG AQ G S A+Q F
Sbjct: 243 GLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLF 302
Query: 345 FGVIKES-KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
+ + KP+ T S+L+A VGA G++ HS++IK+G+ SD I+ +LLD
Sbjct: 303 EKMQLDCMKPDCVTVASLLSACASVGAG-----YKGKQLHSYVIKMGMSSDLIIEGSLLD 357
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
+Y K I + F T+ ++ W ++ A + G+ F +M+ +G+ P+ T
Sbjct: 358 LYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYT 417
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVG 518
+ S+L C G + G + ++K + Y C ++DM + G L+ A ++
Sbjct: 418 YPSILRTCTSLGALDLGEQIHTQVIKSGF---QFNVYVCSVLIDMYAKHGELDTARGILQ 474
Query: 519 QI 520
++
Sbjct: 475 RL 476
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 214/445 (48%), Gaps = 42/445 (9%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M +G+R + ++ C + +L K++H K G+ +G+ L+ Y
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 210 TGDANKVFRRMHDRNVISWTTMIS--MNREDA---VSLFKEMRLDGVCPNDVTFIGLIHA 264
+A K+F + NV W +IS + ++ A + LF M + V P++ TF ++ A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 265 ISIGNL-VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
S G + IH I F S P VCN LI +Y++ + ++ VF+ L ++ +S
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
W A+ISG +QNG A+ F + K + P Y F SVL+A E L G++ H
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKL--GEQLHGF 238
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
I+K GL S+ V +AL+ +Y + G++ ++++F++ + ++ ++IS LA+ G +
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH-------------------LFDS 483
+ F++M+ ++PD +T S+L+ C G +KG+ L D
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDL 358
Query: 484 MLKDYHIEPSPDHY-----------SCMVDMLGRVGRLEEAEE--LVGQIPG-GPGLSVL 529
+K + IE + +++ + M+ G++G L E+ L QI G P
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418
Query: 530 QSLLGACRIHGNVEMGERIADALMK 554
S+L C G +++GE+I ++K
Sbjct: 419 PSILRTCTSLGALDLGEQIHTQVIK 443
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/659 (32%), Positives = 356/659 (54%), Gaps = 81/659 (12%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLF 75
I NP+I N ++S + K D +++A R VFD +
Sbjct: 35 IIKAFRNPEIFLLNNLVSAYAKFD-RITYARR------VFDQMP---------------- 71
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
+Y N L++ YS+ L E RVF MP +D VSWN+++S Y
Sbjct: 72 -------------QRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAG 118
Query: 136 DGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
G + ++++ A M+ G L+ ++ ++ + + LG Q+HG +K G+ ++V
Sbjct: 119 RG-FLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYV 177
Query: 195 SVGNVLMSTYSK-------------------------------CEVTGDANKVFRRMHDR 223
VG+ L+ YSK C D+ ++F M ++
Sbjct: 178 FVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEK 237
Query: 224 NVISWTTMIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI 277
+ ISWT MI+ ++RE A+ LF+EMRL+ + + TF ++ A ++EG+ +
Sbjct: 238 DSISWTAMIAGFTQNGLDRE-AIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQV 296
Query: 278 HGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS 337
H I+T++ V + L+ MY + +S++ +E VF +++C+ ++SW A++ GY QNG S
Sbjct: 297 HAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYS 356
Query: 338 LAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
AV+ F + +P+ +T GSV+++ A SL+ G + H + GL S V +
Sbjct: 357 EEAVKIFCDMQNNGIEPDDFTLGSVISS--CANLASLEEGAQFHCRALVSGLISFITVSN 414
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
AL+ +YGK GSI +S R+F+E E +WTA++S A+ G + F+ M G +P
Sbjct: 415 ALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKP 474
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
D +TF+ VL+ C R G++ KG +F+SM+K++ I P DHY+CM+D+ R GRLEEA +
Sbjct: 475 DKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKF 534
Query: 517 VGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDW 576
+ ++P P SLL +CR H N+E+G+ A++L+K+EP + SY+L+S++YA KG W
Sbjct: 535 INKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKW 594
Query: 577 EMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
E VA LRKGM+ KG+RKE G SW + + +H FS+ D ++P S++IY E L +M
Sbjct: 595 EEVANLRKGMRDKGLRKEPGCSW--IKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKM 651
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 12/244 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MYCK A +F +N ++VSW +L G+ + S++A+ M G+ D
Sbjct: 316 VDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDD 375
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + +S C + G Q H + GL S + V NAL+T+Y + G + ++ R+F E
Sbjct: 376 FTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSE 435
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D VSW A++SGY Q G E + M+ G + D V+F SAC ++
Sbjct: 436 MSYVDEVSWTALVSGYAQFGKAN-ETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQK 494
Query: 178 GKQIHGVSIK----MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMI 232
G QI IK + H + ++ +S+ +A K +M + I W +++
Sbjct: 495 GNQIFESMIKEHRIIPIEDHYT---CMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLL 551
Query: 233 SMNR 236
S R
Sbjct: 552 SSCR 555
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 134/315 (42%), Gaps = 71/315 (22%)
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI--- 328
++ + IH IK E + N L++ YA+F+ + + +VFD++ R + SWN L+
Sbjct: 26 RDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSY 85
Query: 329 ----------------------------SGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
S YA G L +V+A+ ++ N
Sbjct: 86 SKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIAL 145
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF----------- 409
+ A++ + G + H H++K G S VGS L+DMY K G +F
Sbjct: 146 STMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPE 205
Query: 410 --------------------ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
+S+++F + QEK +WTA+I+ ++G ++ F+EM
Sbjct: 206 KNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREM 265
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-DYHIEPSPDHY---SCMVDMLG 505
+ + D TF SVLT CG + +G+ + +++ DY D+ S +VDM
Sbjct: 266 RLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQ-----DNIFVGSALVDMYC 320
Query: 506 RVGRLEEAEELVGQI 520
+ ++ AE + ++
Sbjct: 321 KCKSIKSAETVFRKM 335
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 225/648 (34%), Positives = 359/648 (55%), Gaps = 16/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+N+Y K G D+A+ +F+ L V+WNTV++G+ + AL RM + GV D
Sbjct: 162 INLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDR 221
Query: 58 VTYSTALSFCLDHEGFLFG-LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++A+S C GFL G Q+H + +++ V N LI +Y + RL AR++FD
Sbjct: 222 FVLASAVSAC-SALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFD 280
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M ++ VSW ++SGY Q+ + EAI M + G + D + TS ++CG +
Sbjct: 281 CMEYRNLVSWTTMISGYMQNS-FNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIW 339
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---S 233
G+QIH IK V N L+ Y+KCE +A VF + + + IS+ MI S
Sbjct: 340 QGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYS 399
Query: 234 MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
NR+ +AV++F+ MR + P+ +TF+ L+ S ++ + IHGL IK+ +
Sbjct: 400 KNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLY 459
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ LI +Y++ + D++ VF+ L ++++ WN++I G+AQN A++ F ++
Sbjct: 460 AASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSG 519
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
PN +TF +++ A+ S+ HGQ+ H+ IIK G+D+DP V +AL+DMY K G I E
Sbjct: 520 MAPNEFTFVALVTV--ASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKE 577
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ +F T + W ++I+ A+HG E + F+ M V P+ +TF+ VL+ C
Sbjct: 578 GRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAH 637
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G + +G + F+SM +Y IEP +HY+ +V++ GR G+L A+E + ++P P +V +
Sbjct: 638 AGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWR 697
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLL AC + GN E+G A+ + +P SG YVL+SN+YA KG W V LR+ M S G
Sbjct: 698 SLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSG 757
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
KE G SW +V +H F HP +E IY + + L S +K L
Sbjct: 758 TVKETGCSWIEV--TKEVHTFIVRGREHPEAELIYSVLDELTSLIKNL 803
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/550 (29%), Positives = 277/550 (50%), Gaps = 15/550 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGV-VFDAVT 59
Y G+ A +F+ + + ++VSW +V+S + + D A+S + V +
Sbjct: 63 YSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFL 122
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++ L C + G Q+H + VK LD+ VYVG ALI +Y++ G + EA VF +P
Sbjct: 123 LASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALP 182
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ V+WN +++GY Q G GV A+ M +G+R D SA SAC LE G+
Sbjct: 183 VRTPVTWNTVITGYAQIGCGGV-ALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGR 241
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
QIHG + + T SV NVL+ Y KC A K+F M RN++SWTTMIS +
Sbjct: 242 QIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNS 301
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+++F M G P+ ++++ + +GR IH IK + ++ V N
Sbjct: 302 FNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKN 361
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI MYA+ E + ++ VFD L+ + IS+NA+I GY++N AV F + S +P
Sbjct: 362 ALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRP 421
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ TF S+L ++ ++++ ++ H IIK G D SAL+D+Y K + +++
Sbjct: 422 SLLTFVSLLGV--SSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKT 479
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VFN K W ++I A++ E + F ++ G+ P+ TF++++TV
Sbjct: 480 VFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLAS 539
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ G+ F + + ++ P + ++DM + G ++E L + G + S++
Sbjct: 540 MFHGQQ-FHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLF-ESTCGEDVICWNSMI 597
Query: 534 GACRIHGNVE 543
HG+ E
Sbjct: 598 TTYAQHGHAE 607
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 232/451 (51%), Gaps = 15/451 (3%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H+ G ++++ N L+ YS GRL +AR +FD MP+++ VSW +++S YTQ G
Sbjct: 40 IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99
Query: 139 YGVEAILALIEMMRKGLRL-DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
AI + + + + S AC K + LG+Q+HG+++K+ +V VG
Sbjct: 100 DDC-AISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVG 158
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVC 252
L++ Y+K +A VF + R ++W T+I+ + A+ LF M ++GV
Sbjct: 159 TALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVR 218
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ + A S ++ GR IHG ++ ++ SV N LI +Y + + + K+
Sbjct: 219 PDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKL 278
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
FD + R ++SW +ISGY QN + A+ F+ + + +P+ + S+LN+ G+ I
Sbjct: 279 FDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAI 338
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
G++ H+H+IK L++D V +AL+DMY K + E++ VF+ E ++ A+I
Sbjct: 339 --WQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIE 396
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
+++ D +N F+ M +RP +TF+S+L V I + + ++K
Sbjct: 397 GYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKS---G 453
Query: 492 PSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
S D Y S ++D+ + + +A+ + +
Sbjct: 454 TSLDLYAASALIDVYSKCSLVNDAKTVFNML 484
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 172/357 (48%), Gaps = 16/357 (4%)
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
G ++ L IH + G + + N+L+ YS DA +F RM RN++SW
Sbjct: 29 GGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWG 88
Query: 230 TMISM----NRED-AVSLFKEMRLDGVC--PNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
++ISM R+D A+SLF + C PN+ ++ A + V G +HG+ +
Sbjct: 89 SVISMYTQHGRDDCAISLFVAFQ-KASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAV 147
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K + + V LI +YA+ M ++ VF L R ++WN +I+GYAQ G A++
Sbjct: 148 KLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALE 207
Query: 343 AFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F + I+ +P+ + S ++A A L+ G++ H + + ++D V + L+D+
Sbjct: 208 LFDRMGIEGVRPDRFVLASAVSACSALG--FLEGGRQIHGYAYRSATETDTSVINVLIDL 265
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K + ++++F+ + ++ +WT +IS ++ + F M G +PD
Sbjct: 266 YCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFAC 325
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEEL 516
S+L CG I +GR + ++K + D Y + ++DM + L EA +
Sbjct: 326 TSILNSCGSLAAIWQGRQIHAHVIK---ADLEADEYVKNALIDMYAKCEHLTEARAV 379
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/644 (33%), Positives = 351/644 (54%), Gaps = 19/644 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGF---EKSDDALS-FALRMNLIGVVFDAVTYSTALSFCLDHE 71
IF ++ PD+ +N ++ GF E +LS FA + ++ TY+ A+S
Sbjct: 74 IFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFR 133
Query: 72 GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
G +H V G DSE+ +G+ ++ MY ++ R+ +AR+VFD MP KD++ WN ++S
Sbjct: 134 DDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMIS 193
Query: 132 GYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
GY ++ Y VE+I +++ + RLD + A + L LG QIH ++ K G
Sbjct: 194 GYRKNEMY-VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKE 245
+H V +S YSKC + +FR +++++ MI + E ++SLFKE
Sbjct: 253 YSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
+ L G T + L+ L+ IHG C+K+NFLS SV L T+Y++
Sbjct: 313 LMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNE 369
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNA 364
++ + K+FDE + + SWNA+ISGY QNGL+ A+ F + K E PN T +L+A
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+SL G+ H + +S V +AL+ MY K GSI E++R+F+ +K+E
Sbjct: 430 CAQLGALSL--GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV 487
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W +IS HG + +N F EM N G+ P +TFL VL C G++ +G +F+SM
Sbjct: 488 TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+ Y EPS HY+CMVD+LGR G L+ A + + + PG SV ++LLGACRIH + +
Sbjct: 548 IHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNL 607
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
+++ L +++P G +VL+SN+++ ++ A +R+ K + + K G++ ++G+
Sbjct: 608 ARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGE 667
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
H F+SGD +HP+ +EIY E L +M+ + E +AL
Sbjct: 668 TP--HVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELAL 709
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 218/451 (48%), Gaps = 20/451 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLIG---VVFD 56
+ MY K + + A +F+ + D + WNT++SG+ K++ + S + +LI D
Sbjct: 161 VKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLD 220
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T L + + G+Q+HSL K G S YV I++YS+ G++ +F
Sbjct: 221 TTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFR 280
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNL 175
E D V++NA++ GYT +G+ E L+L E+M G RL + S GH L
Sbjct: 281 EFRKPDIVAYNAMIHGYTSNGE--TELSLSLFKELMLSGARLRSSTLVSLVPVSGH---L 335
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
L IHG +K + +H SV L + YSK A K+F ++++ SW MIS
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 234 -MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
N EDA+SLF+EM+ PN VT ++ A + + G+ +H L T+F S
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V LI MYA+ S+ ++ ++FD ++ + ++WN +ISGY +G A+ F+ ++
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS 515
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSI 408
P TF VL A A + K G + +I + G + + ++D+ G+ G +
Sbjct: 516 GITPTPVTFLCVLYACSHAGLV--KEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHL 573
Query: 409 FES-QRVFNETQEKSEFAWTAIISALARHGD 438
+ Q + + E W ++ A H D
Sbjct: 574 QRALQFIEAMSIEPGSSVWETLLGACRIHKD 604
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/656 (33%), Positives = 372/656 (56%), Gaps = 25/656 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNL-NNPDIVSWNTVLSGFEKSDDALSFALRMNLI-----GVV 54
+++Y K GQ++KA IF + ++ D++SW+ ++S F +++ + F + + G
Sbjct: 108 ISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCF--ANNNMGFRALLTFVDMIENGYY 165
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSR-WGRLVEAR 112
+ ++ A C E G + ++K G L S+V VG LI M+ + G LV A
Sbjct: 166 PNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAF 225
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+VF++MP +++V+W +++ Q G Y EAI ++M+ G D + + SAC +
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFG-YAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM 284
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD---ANKVFRRMHDRNVISWT 229
+ L LG+Q+H +I+ G VG L++ Y+KC V G A K+F ++ D NV SWT
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT 344
Query: 230 TMISMN------REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
MI+ E+A+ LF+ M L V PN TF + A + ++ G + +K
Sbjct: 345 AMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK 404
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
F S V N LI+MYAR + D+ K FD L + +IS+N +I YA+N S A++
Sbjct: 405 LGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALEL 464
Query: 344 FFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
F + + +A+TF S+L+ GAA ++ G++ H+ +IK GL + V +AL+ MY
Sbjct: 465 FNEIEDQGMGASAFTFASLLS--GAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMY 522
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
+ G+I + +VF + ++++ +WT+II+ A+HG + F +M +GVRP+ +T++
Sbjct: 523 SRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYI 582
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+VL+ C G++++G F SM ++ + P +HY+C+VD+LGR G L EA + + +P
Sbjct: 583 AVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPY 642
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
V ++ LGACR+HGN+E+G+ A +++ EP +Y+L+SNLYA W+ V+ +
Sbjct: 643 KADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNI 702
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
RK MK K + KE G SW +V + +H F GD +HP++ EIY + L ++K L
Sbjct: 703 RKAMKEKXLIKEAGCSWVEVE--NKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKL 756
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/473 (29%), Positives = 243/473 (51%), Gaps = 21/473 (4%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D TYS L C+ F G +H + + L + N+LI++YS+ G+ +A +F
Sbjct: 65 DLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIF 124
Query: 116 DEM-PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
M ++D +SW+A++S + + + G A+L ++M+ G + F +A AC +
Sbjct: 125 RLMGSSRDLISWSAMVSCFANN-NMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEF 183
Query: 175 LELGKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGD---ANKVFRRMHDRNVISWTT 230
+ +G I G IK GY + V VG L+ + K GD A KVF +M +RN ++WT
Sbjct: 184 VSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGR--GDLVSAFKVFEKMPERNAVTWTL 241
Query: 231 MISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MI+ + +A+ LF +M G P+ T G+I A + L+ G+ +H I+
Sbjct: 242 MITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHG 301
Query: 286 FLSEPSVCNCLITMYARFE---SMQDSEKVFDELSCREIISWNALISGYAQN-GLSLAAV 341
+ V CLI MYA+ SM + K+FD++ + SW A+I+GY Q G A+
Sbjct: 302 LTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEAL 361
Query: 342 QAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
F G+I PN +TF S L A A +L+ G++ +H +K+G S V ++L+
Sbjct: 362 DLFRGMILTHVIPNHFTFSSTLKA--CANLAALRIGEQVFTHAVKLGFSSVNCVANSLIS 419
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY + G I ++++ F+ EK+ ++ +I A A++ + E + F E+E++G+ + T
Sbjct: 420 MYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFT 479
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
F S+L+ G I KG + ++K ++ + + ++ M R G +E A
Sbjct: 480 FASLLSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALISMYSRCGNIESA 531
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/632 (34%), Positives = 345/632 (54%), Gaps = 19/632 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
+ +SG AL +F +N+ D WN ++ G+ + +A+ F RM G+ D T+
Sbjct: 68 FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ C + + G ++H ++K G D +VYV N LI MY + G + A +VFDEMP
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D VSWN+++SGY DGD G+ +++ EM+R G + D SA AC E L G +
Sbjct: 188 RDLVSWNSMVSGYQIDGD-GLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGME 246
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAV 240
IH I+ + V L+ Y KC A +VF R++ +N+++W MI +ED
Sbjct: 247 IHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQED-- 304
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
D V P+ +T I L+ + S + EG+ IHG I+ FL + L+ MY
Sbjct: 305 --------DKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMY 356
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFG 359
+ ++ +E VF++++ + ++SWN +++ Y QN A++ F ++ E KP+A T
Sbjct: 357 GKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIA 416
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
SVL AV AE S G++ HS+I+K+GL S+ + +A++ MY K G + ++ F+
Sbjct: 417 SVLPAV--AELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMV 474
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
K +W +I A A HG + + F EM KG +P+ TF+S+LT C +G+I +G
Sbjct: 475 CKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWG 534
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIH 539
F+SM +Y I+P +HY CM+D+LGR G L+EA+ + ++P P + SLL A R H
Sbjct: 535 FFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNH 594
Query: 540 GNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSW 599
+V + E A ++ ++ +G YVL+SN+YAE G WE V ++ MK +G+ K VG S
Sbjct: 595 NDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSM 654
Query: 600 ADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
D+ F + D +H + IY + + L
Sbjct: 655 VDINGRS--ESFINQDRSHAHTNLIYDVLDIL 684
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 227/449 (50%), Gaps = 29/449 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFAL---RMNLIGVVFDA 57
++MY K G + A +F+ + D+VSWN+++SG++ D LS + M +G D
Sbjct: 166 IDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADR 225
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+AL C G+++H +++ L+ ++ V +LI MY + G++ A RVF+
Sbjct: 226 FGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNR 285
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +K+ V+WNA++ G +D D + ++ +I ++ +C L
Sbjct: 286 IYSKNIVAWNAMIGGMQED-DKVIPDVITMINLL---------------PSCSQSGALLE 329
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK IHG +I+ + ++ + L+ Y KC A VF +M+++N++SW TM++
Sbjct: 330 GKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQ 389
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++A+ +F+ + + + P+ +T ++ A++ EG+ IH +K S +
Sbjct: 390 NEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFI 449
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI--KE 350
N ++ MYA+ +Q + + FD + C++++SWN +I YA +G ++Q FF + K
Sbjct: 450 SNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQ-FFSEMRGKG 508
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN TF S+L A + I G +S ++ G+D +LD+ G+ G++ E
Sbjct: 509 FKPNGSTFVSLLTACSISGLIDEGWG-FFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDE 567
Query: 411 SQRVFNETQ-EKSEFAWTAIISALARHGD 438
++ E + W ++++A H D
Sbjct: 568 AKCFIEEMPLVPTARIWGSLLAASRNHND 596
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 215/482 (44%), Gaps = 39/482 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++MY K G+ D A +FN + + +IV+WN ++ G ++ D V+ D +T
Sbjct: 267 IDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDK------------VIPDVITM 314
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
L C L G +H ++ + + AL+ MY + G L A VF++M
Sbjct: 315 INLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNE 374
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
K+ VSWN +++ Y Q+ Y EA+ ++ + L+ D ++ S A + GKQ
Sbjct: 375 KNMVSWNTMVAAYVQNEQYK-EALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQ 433
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR---- 236
IH +K+G G++ + N ++ Y+KC A + F M ++V+SW TMI
Sbjct: 434 IHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGF 493
Query: 237 -EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV--C 293
++ F EMR G PN TF+ L+ A SI L+ EG +K + +P +
Sbjct: 494 GRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFN-SMKVEYGIDPGIEHY 552
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG-YAQNGLSLAAVQAFFGV-IKE 350
C++ + R ++ +++ +E+ W +L++ N + LA + A + +K
Sbjct: 553 GCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKH 612
Query: 351 SKPNAYTFGSVLNA-VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
Y S + A G ED+ ++K VG +++D+ G+ S
Sbjct: 613 DNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKT-------VGCSMVDINGRSESFI 665
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGD--YESVMNQFKEMENKGVRPDSITFLSV-LT 466
R + + + + L + G+ Y + +F+ ++ R +S + SV L
Sbjct: 666 NQDR----SHAHTNLIYDVLDILLKKIGEDIYLHSLTKFRPLDVAKKRGNSPEYHSVKLA 721
Query: 467 VC 468
+C
Sbjct: 722 IC 723
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/587 (35%), Positives = 328/587 (55%), Gaps = 16/587 (2%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+++ L C G +H+ + GL E AL MY++ R +ARRVFD M
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNLE 176
P +D V+WNA+++GY ++G EA + ++ M++ G R D V+ S AC + L
Sbjct: 287 PARDRVAWNALVAGYARNG--LAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALG 344
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
+++H +++ G+ V+V ++ Y KC A KVF M DRN +SW MI
Sbjct: 345 ACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYA 404
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E +A++LFK M +GV DV+ + +HA + EGR +H L ++ S +
Sbjct: 405 ENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVN 464
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LITMY + + + +VFDEL + +SWNA+I G QNG S AV+ F + E+
Sbjct: 465 VMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLEN 524
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQR-CHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+++T S++ A+ DIS R H + I++ LD D V +AL+DMY K G +
Sbjct: 525 VKPDSFTLVSIIPALA---DISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVS 581
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ +FN +++ W A+I HG + + F+EM++ G P+ TFLSVL+ C
Sbjct: 582 IARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACS 641
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G+ F SM +DY +EP +HY MVD+LGR G+L EA + ++P PG+SV
Sbjct: 642 HAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVY 701
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LGAC++H NVE+ E A + ++EP +VL++N+YA W+ VA +R M+ K
Sbjct: 702 GAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKK 761
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G++K G W+ V + +H F SG H ++++IY L E+K
Sbjct: 762 GLQKTPG--WSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIK 806
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 226/421 (53%), Gaps = 14/421 (3%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNL-IGVVFDA 57
NMY K + A +F+ + D V+WN +++G+ + ++ A+ +RM G DA
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDA 327
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT + L C D + ++H+ V+ G D +V V A++ +Y + G + AR+VFD
Sbjct: 328 VTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDG 387
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +++SVSWNA++ GY ++GD EA+ M+ +G+ + VS +A ACG L+
Sbjct: 388 MQDRNSVSWNAMIKGYAENGD-ATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDE 446
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+++H + +++G ++V+V N L++ Y KC+ T A +VF + + +SW MI
Sbjct: 447 GRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQ 506
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + EDAV LF M+L+ V P+ T + +I A++ + + R IHG I+ + + V
Sbjct: 507 NGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYV 566
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
LI MYA+ + + +F+ R +I+WNA+I GY +G AV+ F + K
Sbjct: 567 LTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGK 626
Query: 353 -PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSIFE 410
PN TF SVL+A A + GQ S + + GL+ ++D+ G+ G + E
Sbjct: 627 VPNETTFLSVLSACSHAGLVD--EGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHE 684
Query: 411 S 411
+
Sbjct: 685 A 685
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/284 (35%), Positives = 150/284 (52%), Gaps = 11/284 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+++YCK G D A +F+ + + + VSWN ++ G+ ++ D AL+ RM GV
Sbjct: 369 LDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTD 428
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
V+ AL C GFL G ++H L+V+ GL+S V V NALITMY + R A +VFD
Sbjct: 429 VSVLAALHAC-GELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFD 487
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E+ K VSWNA++ G TQ+G +A+ M + ++ D + S A +
Sbjct: 488 ELGYKTRVSWNAMILGCTQNGS-SEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPL 546
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
+ IHG SI++ V V L+ Y+KC A +F DR+VI+W MI
Sbjct: 547 QARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYG 606
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
+ + AV LF+EM+ G PN+ TF+ ++ A S LV EG+
Sbjct: 607 SHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQ 650
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/668 (31%), Positives = 369/668 (55%), Gaps = 49/668 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
++MY K + L +F+ + + V+WN+++S F +DAL LRM G +
Sbjct: 318 IDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNR 377
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ L G +LH +V+ L+S++ +G+AL+ MYS+ G + EA +VF
Sbjct: 378 FNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRS 437
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNL 175
+ ++ VS+NA+L+GY Q+G E L L M+ G++ D +FT+ + C +++N
Sbjct: 438 LLERNEVSYNALLAGYVQEGK--AEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRND 495
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
G+QIH I+ ++ V L+ YS+C A ++F RM +RN SW +MI
Sbjct: 496 NQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGY 555
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ ++A+ LFK+M+L+G+ P+ + ++ + + ++GR +H ++ E
Sbjct: 556 QQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEG 615
Query: 291 SVCNCLITMYARFESM-------------------------------QDSEKVFDELSCR 319
+ L+ MYA+ SM D++ +FD++ R
Sbjct: 616 ILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQR 675
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQR 378
WN++++GYA GL + F +++ + + T +++N + +L+HG +
Sbjct: 676 NTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLP--ALEHGDQ 733
Query: 379 CHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
HS IIK G ++ ++ +AL+DMY K G+I +++ VF+ K+ +W A+IS ++HG
Sbjct: 734 LHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHG 793
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
+ + ++EM KG+ P+ +TFL++L+ C G++ +G +F SM +DY+IE +HY
Sbjct: 794 CSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHY 853
Query: 498 SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
+CMVD+LGR GRLE+A+E V ++P P +S +LLGACR+H +++MG A L +++P
Sbjct: 854 TCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDP 913
Query: 558 AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNT 617
G YV+MSN+YA G W+ V +R+ MK KGV+K+ G SW ++ + F +G T
Sbjct: 914 QNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEIN--SEIQIFHAGSKT 971
Query: 618 HPRSEEIY 625
HP++EEIY
Sbjct: 972 HPKTEEIY 979
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 146/531 (27%), Positives = 276/531 (51%), Gaps = 19/531 (3%)
Query: 3 MYCKSGQFDKALC----IFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVF 55
+Y +SG D LC +F + ++ +WNT++ + + DD L RM G
Sbjct: 115 LYARSGCLDD-LCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFS 173
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T+ + + C+ E QL S +VK GL+ ++VG AL+ Y+R+G + +A
Sbjct: 174 DKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSL 233
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
DE+ V+WNA+++GY + + EA M++ G+ D+ +F SA CG ++
Sbjct: 234 DEIEGTSVVTWNAVIAGYVKILSWE-EAWGIFDRMLKIGVCPDNFTFASALRVCGALRSR 292
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+ GKQ+H I G+ VGN L+ Y+KC+ KVF M +RN ++W ++IS
Sbjct: 293 DGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAE 352
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ DA+ LF M+ G N ++ A + + +GR +HG ++ S+
Sbjct: 353 AQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDI 412
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ + L+ MY++ ++++ +VF L R +S+NAL++GY Q G + A++ + + E
Sbjct: 413 ILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSE 472
Query: 351 S--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+P+ +TF ++L A + G++ H+H+I+ + + IV + L+ MY + G +
Sbjct: 473 DGIQPDQFTFTTLLTL--CANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRL 530
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ +FN E++ ++W ++I ++G+ + + FK+M+ G++PD + S+L+ C
Sbjct: 531 NYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 590
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
KGR L + ++++ +E +VDM + G ++ A ++ Q
Sbjct: 591 VSLSDSQKGRELHNFIVRNT-MEEEGILQVVLVDMYAKCGSMDYAWKVYDQ 640
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 244/476 (51%), Gaps = 16/476 (3%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWG---RLVEAR 112
+ + YS+ + C+D F G +H+ ++ G + + Y+ ++ +Y+R G L AR
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
++F+EMP ++ +WN ++ Y + DY +E + M G D +F S AC
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDY-MEVLRLYGRMRGSGNFSDKFTFPSVIKACIAM 188
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+++ +Q+ +K G ++ VG L+ Y++ DA + +V++W +I
Sbjct: 189 EDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVI 248
Query: 233 S-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ ++ E+A +F M GVCP++ TF + G+ +H I F
Sbjct: 249 AGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFK 308
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ V N LI MYA+ + + KVFDE+ R ++WN++IS AQ G A+ F
Sbjct: 309 GDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLR- 367
Query: 348 IKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ES K N + GS+L A DI G+ H H+++ L+SD I+GSAL+DMY K
Sbjct: 368 MQESGYKSNRFNLGSILMASAGLADIG--KGRELHGHLVRNLLNSDIILGSALVDMYSKC 425
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK-GVRPDSITFLSV 464
G + E+ +VF E++E ++ A+++ + G E + + +M+++ G++PD TF ++
Sbjct: 426 GMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTL 485
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
LT+C ++GR + +++ +I + + +V M GRL A+E+ ++
Sbjct: 486 LTLCANQRNDNQGRQIHAHLIRA-NITKNIIVETELVHMYSECGRLNYAKEIFNRM 540
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/642 (33%), Positives = 355/642 (55%), Gaps = 20/642 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY + D A +F ++N D VSWN+++SG+ + +DAL + + G+V D
Sbjct: 163 IDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDC 222
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ L C G+ +H +I K G+ +V +GN L++MY ++ RL EARRVF +
Sbjct: 223 FTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSK 282
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KDSV+WN ++ GY Q G + EA + L M G D +S TS ACG +L++
Sbjct: 283 MAVKDSVTWNTMICGYAQLGRH--EASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQV 340
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GK +H I G+ N+L+ Y+KC A +VF ++ ++W ++I
Sbjct: 341 GKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQ 400
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S ++ + FK M+++ P+ VTF+ L+ S + +GR IH IK F +E +
Sbjct: 401 SGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELII 459
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ +YA+ M D KVF +S +IISWN +I+ + + F +I E +
Sbjct: 460 GNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIA----SSVHFDDCTVGFQMINEMR 515
Query: 353 PNAYTF--GSVLNAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+VL + ++++ G+ H +I K G +S+ +G+AL++MY K GS+
Sbjct: 516 TEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLE 575
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+VF +EK WTA+ISA +G+ + + F++ME GV PDS+ F++ + C
Sbjct: 576 NCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACS 635
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+GM+ +G FD M DY++EP +HY+C+VD+L R G L +AEE + +P P S+
Sbjct: 636 HSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLW 695
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+LL ACR GN + +R++ ++++ +G YVL+SN+YA G W+ V +R MK+K
Sbjct: 696 GALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTK 755
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
G++KE G SW ++ ++ F +GD + + +++ + E L
Sbjct: 756 GLKKEPGSSWIEIQ--KRVYVFRTGDKSFEQYDKVKDLLEYL 795
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 158/545 (28%), Positives = 278/545 (51%), Gaps = 19/545 (3%)
Query: 24 DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
++ WN+++ + AL + M + DA T+ + ++ C G +H
Sbjct: 85 NVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVH 144
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
++ G +S++Y+GNALI MYSR+ L AR VF+EM N+DSVSWN+++SGY +G +
Sbjct: 145 EHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW- 203
Query: 141 VEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
E L + R G+ D + +S ACG ++ G +HGV K+G V +GN
Sbjct: 204 -EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNG 262
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----SMNREDA-VSLFKEMRLDGVCPN 254
L+S Y K E +A +VF +M ++ ++W TMI + R +A V LF +M +DG P+
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPD 321
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
++ I A ++ G+ +H I + F + CN LI MYA+ + +++VFD
Sbjct: 322 MLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFD 381
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLK 374
C++ ++WN+LI+GY Q+G +++F + E KP++ TF +L+ DI+
Sbjct: 382 TTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADIN-- 439
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G+ H +IK G +++ I+G++LLD+Y K G + + +VF+ +W +I++
Sbjct: 440 QGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSV 499
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
D EM +G+ PD T L +L +C + +G+ + + K E +
Sbjct: 500 HFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKS-GFESNV 558
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
+ +++M + G LE + V + + +L+ A ++G G++ A
Sbjct: 559 PIGNALIEMYSKCGSLENCIK-VFKYMKEKDVVTWTALISAFGMYGE---GKKALKAFQD 614
Query: 555 MEPAG 559
ME +G
Sbjct: 615 MELSG 619
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 238/440 (54%), Gaps = 11/440 (2%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM-PNKDSVSWNAILSGYTQDG 137
+HSLI+ GL V LI+ Y++ + + VF + P + WN+I+ T +G
Sbjct: 41 VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ +A+ EM K L+ D +F S ++C +LELG +H +++MG+ + + +G
Sbjct: 101 LF-TQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIG 159
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVC 252
N L+ YS+ +A VF M +R+ +SW ++IS EDA+ ++ + R+ G+
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ T ++ A VKEG +HG+ K + + N L++MY +FE ++++ +V
Sbjct: 220 PDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDIS 372
F +++ ++ ++WN +I GYAQ G A+V+ F +I P+ + S + A G + D
Sbjct: 280 FSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGD-- 337
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L+ G+ H ++I G + D + + L+DMY K G + +Q VF+ T+ K W ++I+
Sbjct: 338 LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLING 397
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
+ G Y+ + FK M+ + +PDS+TF+ +L++ + I++GR + ++K + E
Sbjct: 398 YTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIK-FGFEA 455
Query: 493 SPDHYSCMVDMLGRVGRLEE 512
+ ++D+ + G +++
Sbjct: 456 ELIIGNSLLDVYAKCGEMDD 475
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 204/413 (49%), Gaps = 18/413 (4%)
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTM 231
KN + +H + I G V L+S Y++ + + VFR + NV W ++
Sbjct: 33 KNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSI 92
Query: 232 ISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I + A+ + EMR + P+ TF +I++ + ++ G ++H ++ F
Sbjct: 93 IRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGF 152
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S+ + N LI MY+RF + ++ VF+E+S R+ +SWN+LISGY NG A+ +
Sbjct: 153 ESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHK 212
Query: 347 V-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ P+ +T SVL A G+ +++K G H I K+G+ D I+G+ LL MY K
Sbjct: 213 FRMTGMVPDCFTMSSVLLACGSL--MAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
+ E++RVF++ K W +I A+ G +E+ + F +M + G PD ++ S +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTI 329
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIPGG 523
CG++G + G+ + ++ D +C ++DM + G L A+E+
Sbjct: 330 RACGQSGDLQVGKFVHKYLIGSGF---ECDTVACNILIDMYAKCGDLLAAQEVFDTTKCK 386
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKME-PAGSGSYVLMSNLYAEKGD 575
++ SL+ G + G + +MKME S ++VL+ +++++ D
Sbjct: 387 DSVT-WNSLINGYTQSGYYKEGLE-SFKMMKMERKPDSVTFVLLLSIFSQLAD 437
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 6/220 (2%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS-CR 319
L+ +S + R +H L I + LI+ YA+ + S VF +S
Sbjct: 25 LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTN 84
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQ 377
+ WN++I NGL A+ ++ ++E K P+A+TF SV+N+ D+ L G
Sbjct: 85 NVYLWNSIIRALTHNGLFTQAL-GYYTEMREKKLQPDAFTFPSVINSCARILDLEL--GC 141
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
H H +++G +SD +G+AL+DMY + + ++ VF E + +W ++IS +G
Sbjct: 142 IVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNG 201
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
+E ++ + + G+ PD T SVL CG + +G
Sbjct: 202 FWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/657 (33%), Positives = 345/657 (52%), Gaps = 80/657 (12%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D+ ++ L C+ + +H+ I+K SE+++ N L+ +Y + G L +AR+V
Sbjct: 17 LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKV 76
Query: 115 FDEM-------------------------------PNKDSVSWNAILSGYTQDGDYGVEA 143
FD M P +D SWNA++SG+ Q D EA
Sbjct: 77 FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQR-DRFEEA 135
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
+ +++M + L+ SF SA SAC +L +G QIHG+ K Y V +G+ L+
Sbjct: 136 LRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDM 195
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTF 258
YSKC V A + F M RN++SW ++I+ ++ A+ +F M G+ P+++T
Sbjct: 196 YSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITL 255
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTN-FLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
+ A + + ++EG IH +K + + ++ + N L+ MYA+ + ++ VFD +
Sbjct: 256 ASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP 315
Query: 318 CREIIS-------------------------------WNALISGYAQNGLSLAAVQAFFG 346
R+++S WNALI+GY QNG + AV+ F
Sbjct: 316 LRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLL 375
Query: 347 VIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL------DSDPIVGSALL 399
+ +ES P YTFG++LNA D LK G++ H+HI+K G DSD VG++L+
Sbjct: 376 LKRESIWPTHYTFGNLLNACANLAD--LKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLI 433
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K G + + + VF E+ +W A+I A++G + F+EM G RPD +
Sbjct: 434 DMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHV 493
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
T + VL+ C G++ +GR F SM ++ + P DHY+CMVD+LGR G L+EA L+
Sbjct: 494 TMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQT 553
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P P V SLL AC++HGN+ +G+ +A+ L++++P SG YVL+SN+YAE G W+ V
Sbjct: 554 MPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDV 613
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+RK M+ GV K+ G SW + LH F D HP ++IY + + L +MK
Sbjct: 614 VRVRKQMRQMGVIKQPGCSWISIQ--SHLHVFMVKDKRHPHKKDIYLILKILTEQMK 668
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 235/483 (48%), Gaps = 54/483 (11%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYST 62
K G D+AL +F + D SWN ++SGF + D +AL F + M+ V + ++ +
Sbjct: 97 KFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGS 156
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
ALS C G+Q+H LI K +VY+G+AL+ MYS+ + A+R FD+M ++
Sbjct: 157 ALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRN 216
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSWN++++ Y Q+G G +A+ + MM G+ D ++ S ASAC + G QIH
Sbjct: 217 IVSWNSLITCYEQNGPAG-KALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIH 275
Query: 183 GVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-------- 233
+K Y + +GN L+ Y+KC +A VF RM R+V+S T+M+S
Sbjct: 276 ARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSV 335
Query: 234 ----------MNR------------------EDAVSLFKEMRLDGVCPNDVTFIGLIHAI 265
M R E+AV LF ++ + + P TF L++A
Sbjct: 336 KAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNAC 395
Query: 266 SIGNLVKEGRMIHGLCIKTNFL------SEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
+ +K GR H +K F S+ V N LI MY + ++D VF+ + R
Sbjct: 396 ANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLER 455
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTFGSVLNAVGAAEDISLKHGQR 378
+ +SWNA+I GYAQNG A++ F ++ +P+ T VL+A A L R
Sbjct: 456 DNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHA---GLVEEGR 512
Query: 379 CH--SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE-TQEKSEFAWTAIISALAR 435
C+ S I+ GL + ++D+ G+ G + E+ + E W ++++A
Sbjct: 513 CYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKV 572
Query: 436 HGD 438
HG+
Sbjct: 573 HGN 575
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 189/383 (49%), Gaps = 49/383 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K A F++++ +IVSWN++++ +E+ + AL +RM G+ D
Sbjct: 193 VDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDE 252
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T ++ S C GLQ+H+ ++K +++ +GNAL+ MY++ R+ EAR VFD
Sbjct: 253 ITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFD 312
Query: 117 EMPNKD-------------------------------SVSWNAILSGYTQDGDYGVEAIL 145
MP +D VSWNA+++GYTQ+G+ EA+
Sbjct: 313 RMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGE-NEEAVR 371
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI------HGVSIKMGYGTHVSVGNV 199
+ + R+ + H +F + +AC + +L+LG+Q HG K G + + VGN
Sbjct: 372 LFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNS 431
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPN 254
L+ Y KC + D VF RM +R+ +SW MI + +A+ +F+EM + G P+
Sbjct: 432 LIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPD 491
Query: 255 DVTFIGLIHAISIGNLVKEGR-MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
VT IG++ A S LV+EGR + I+ + C++ + R + ++ +
Sbjct: 492 HVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLI 551
Query: 314 DELSCR-EIISWNALISGYAQNG 335
+ + + W +L++ +G
Sbjct: 552 QTMPMEPDAVVWGSLLAACKVHG 574
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + +F + D VSWN ++ G+ ++ +AL M + G D
Sbjct: 433 IDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDH 492
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
VT LS C L EG + S+ ++ GL ++ + R G L EA
Sbjct: 493 VTMIGVLSACSHAGLVEEGRCY---FQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANN 549
Query: 114 VFDEMP-NKDSVSWNAILS-----GYTQDGDYGVEAILAL 147
+ MP D+V W ++L+ G G Y E +L +
Sbjct: 550 LIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEI 589
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/648 (32%), Positives = 353/648 (54%), Gaps = 18/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-LSFALRMNLI--GVVFDA 57
++ Y K G D A +F+ L V+W T++SG K + +S L L+ VV D
Sbjct: 190 IDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDG 249
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
ST LS C G Q+H+ I+++GL+ + + N LI Y + GR++ A ++F+
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG 309
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MPNK+ +SW +LSGY Q+ + EA+ M + GL+ D + +S ++C L
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHK-EAMELFTSMSKFGLKPDMYACSSILTSCASLHALGF 368
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G Q+H +IK G V N L+ Y+KC+ DA KVF +V+ + MI
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR 428
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+A+++F++MR + P+ +TF+ L+ A + + + IHGL K +
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLD 488
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-I 348
+ LI +Y+ ++DS VFDE+ ++++ WN++ +GY Q + A+ F + +
Sbjct: 489 IFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQL 548
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+P+ +TF +++ A G + L GQ H ++K GL+ +P + +ALLDMY K GS
Sbjct: 549 SRERPDEFTFANMVTAAGNLASVQL--GQEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ + F+ + W ++IS+ A HG+ + + ++M ++G+ P+ ITF+ VL+ C
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ G F+ ML+ + IEP +HY CMV +LGR GRL +A EL+ ++P P V
Sbjct: 667 SHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV 725
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+SLL C GNVE+ E A+ + +P SGS+ ++SN+YA KG W +R+ MK
Sbjct: 726 WRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKV 785
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+GV KE G SW +G +H F S D +H ++ +IY + + L +++
Sbjct: 786 EGVVKEPGRSW--IGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 157/538 (29%), Positives = 266/538 (49%), Gaps = 35/538 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG------FEKSDDALSFALRMNLIGVV 54
+N+Y ++G A +F + ++VSW+T++S +E+S + +
Sbjct: 86 INLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEES-----LVVFLEFWRTR 140
Query: 55 FDAVTYSTALSFC-----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
D+ SF LD G QL S +VK G D +VYVG LI Y + G +
Sbjct: 141 KDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNID 200
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
AR VFD +P K +V+W ++SG + G V L ++M + D ++ SAC
Sbjct: 201 YARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQL-FYQLMEDNVVPDGYILSTVLSAC 259
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
LE GKQIH ++ G S+ NVL+ +Y KC A+K+F M ++N+ISWT
Sbjct: 260 SILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWT 319
Query: 230 TMISMNREDAV-----SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
T++S +++A+ LF M G+ P+ ++ + + + + G +H IK
Sbjct: 320 TLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKA 379
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
N ++ V N LI MYA+ + + D+ KVFD + +++ +NA+I GY++ G +A
Sbjct: 380 NLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEAL 439
Query: 345 -------FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
F +I +P+ TF S+L A +A SL ++ H + K GL+ D GSA
Sbjct: 440 NIFRDMRFRLI---RPSLLTFVSLLRA--SASLTSLGLSKQIHGLMFKYGLNLDIFAGSA 494
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L+D+Y + +S+ VF+E + K W ++ + + + E +N F E++ RPD
Sbjct: 495 LIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPD 554
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
TF +++T G + G+ +LK +E +P + ++DM + G E+A +
Sbjct: 555 EFTFANMVTAAGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHK 611
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 208/401 (51%), Gaps = 19/401 (4%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H I+ +GL+ + Y+ N LI +YSR G +V AR+VF++MP ++ VSW+ ++S G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 139 YGVEAILALIEMMRKGLRLDHVS---FTSAASACG--HEKNLELGKQIHGVSIKMGYGTH 193
Y E+++ +E R R D + +S AC + + Q+ +K G+
Sbjct: 126 YE-ESLVVFLEFWRT--RKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRD 182
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----MNRED-AVSLFKEMRL 248
V VG +L+ Y K A VF + +++ ++WTTMIS M R ++ LF ++
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
D V P+ ++ A SI ++ G+ IH ++ + S+ N LI Y + +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGA 367
+ K+F+ + + IISW L+SGY QN L A++ F + K KP+ Y S+L + +
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
+L G + H++ IK L +D V ++L+DMY K + ++++VF+ +
Sbjct: 363 LH--ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFN 420
Query: 428 AIISALARHG---DYESVMNQFKEMENKGVRPDSITFLSVL 465
A+I +R G + +N F++M + +RP +TF+S+L
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 3/266 (1%)
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
F L+ + +L+ ++HG I + + N LI +Y+R M + KVF+++
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 318 CREIISWNALISGYAQNGLSLAAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKH 375
R ++SW+ ++S +G+ ++ F F ++ PN Y S + A +
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
+ S ++K G D D VG+ L+D Y K G+I ++ VF+ EKS WT +IS +
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
G + F ++ V PD +VL+ C + G+ + +L+ Y +E
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDAS 285
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIP 521
+ ++D + GR+ A +L +P
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMP 311
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
A D L + H II GL+ D + + L+++Y + G + +++VF + E++ +W+
Sbjct: 55 ASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWS 114
Query: 428 AIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVC------------------ 468
++SA HG YE + F E + P+ S + C
Sbjct: 115 TMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFL 174
Query: 469 ---GRNGMIHKGRHLFDSMLKDYHI-----------EPSPDHYSCMVDMLGRVGRLEEAE 514
G + ++ G L D LKD +I E S ++ M+ ++GR +
Sbjct: 175 VKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSL 234
Query: 515 ELVGQIPGG---PGLSVLQSLLGACRIHGNVEMGERIADALMK 554
+L Q+ P +L ++L AC I +E G++I +++
Sbjct: 235 QLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR 277
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/639 (33%), Positives = 358/639 (56%), Gaps = 25/639 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N KSG+ AL +F+ + ++V+W +V+SG+ ++ + AL+ M GV +
Sbjct: 55 LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPND 114
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ AL C D G Q+HSL V+ G + ++G+ LI MYSR G L A+ VFD
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + D V + +++S + ++G++ + A ALI+M+++GL+ + + T+ +AC L
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAA-EALIQMLKQGLKPNEHTMTTILTACPRV----L 229
Query: 178 GKQIHGVSIK-MGYGTH-VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
G+QIHG IK +G + V L+ YS+ A VF +H +NV+SW +M+ +
Sbjct: 230 GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLY 289
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSE 289
E+A+ +F +M +GV PN+ ++ A SIG GR +H IK + +++
Sbjct: 290 IRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG----LGRQLHCSAIKHDLITD 345
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V N L++MY R +++ E + +++ +++SW IS QNG A+ +
Sbjct: 346 IRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHS 405
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E PN Y F SVL++ A+ SL G + H +K+G DS+ G+AL++MY K G +
Sbjct: 406 EGFTPNGYAFSSVLSS--CADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 463
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ F+ +W ++I A+HGD + F +M + G++PD TFL VL C
Sbjct: 464 GSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGC 523
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+GM+ +G F M+ Y P+P HY+CM+DMLGR GR +EA ++ +P P +
Sbjct: 524 NHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALI 583
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
++LL +C++H N+++G+ AD LM++ S SYVLMSN+YA G+WE +R+ M
Sbjct: 584 WKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDE 643
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
GV+K+ G SW ++ + +H F+S D +HP S+ IY+M
Sbjct: 644 TGVKKDAGCSWIEIN--NEVHTFASRDMSHPNSDSIYQM 680
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D ++ L+ K G + ++ +F+ K+ AWT+++S R+G E+ + F +M
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVG 508
GV P+ + L C G + G + ++ + D + SC+++M R G
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGF---AGDAWIGSCLIEMYSRCG 163
Query: 509 RLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
L A+E+ ++ P + SL+ A +G E+ A+AL++M G
Sbjct: 164 SLPAAKEVFDRM-DSPDVVGYTSLISAFCRNGEFELA---AEALIQMLKQG 210
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/642 (33%), Positives = 355/642 (55%), Gaps = 20/642 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY + D A +F ++N D VSWN+++SG+ + +DAL + + G+V D
Sbjct: 163 IDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDC 222
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ L C G+ +H +I K G+ +V +GN L++MY ++ RL EARRVF +
Sbjct: 223 FTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSK 282
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KDSV+WN ++ GY Q G + EA + L M G D +S TS ACG +L++
Sbjct: 283 MAVKDSVTWNTMICGYAQLGRH--EASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQV 340
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GK +H I G+ N+L+ Y+KC A +VF ++ ++W ++I
Sbjct: 341 GKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQ 400
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S ++ + FK M+++ P+ VTF+ L+ S + +GR IH IK F +E +
Sbjct: 401 SGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELII 459
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ +YA+ M D KVF +S +IISWN +I+ + + F +I E +
Sbjct: 460 GNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIA----SSVHFDDCTVGFQMINEMR 515
Query: 353 PNAYTF--GSVLNAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+VL + ++++ G+ H +I K G +S+ +G+AL++MY K GS+
Sbjct: 516 TEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLE 575
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+VF +EK WTA+ISA +G+ + + F++ME GV PDS+ F++ + C
Sbjct: 576 NCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACS 635
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+GM+ +G FD M DY++EP +HY+C+VD+L R G L +AEE + +P P S+
Sbjct: 636 HSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLW 695
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+LL ACR GN + +R++ ++++ +G YVL+SN+YA G W+ V +R MK+K
Sbjct: 696 GALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTK 755
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
G++KE G SW ++ ++ F +GD + + +++ + E L
Sbjct: 756 GLKKEPGSSWIEIQ--KRVYVFRTGDKSFEQYDKVKDLLEYL 795
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 157/545 (28%), Positives = 278/545 (51%), Gaps = 19/545 (3%)
Query: 24 DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
++ WN+++ + AL + M + DA T+ + ++ C G +H
Sbjct: 85 NVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVH 144
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
++ G +S++Y+GNALI MYSR+ L AR VF+EM N+DSVSWN+++SGY +G +
Sbjct: 145 EHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW- 203
Query: 141 VEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
E L + R G+ D + +S ACG ++ G +HGV K+G V +GN
Sbjct: 204 -EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNG 262
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----SMNREDA-VSLFKEMRLDGVCPN 254
L+S Y K E +A +VF +M ++ ++W TMI + R +A V LF +M +DG P+
Sbjct: 263 LLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPD 321
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
++ I A ++ G+ +H I + F + CN LI MYA+ + +++VFD
Sbjct: 322 MLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFD 381
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLK 374
C++ ++WN+LI+GY Q+G +++F + E KP++ TF +L+ DI+
Sbjct: 382 TTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADIN-- 439
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G+ H +IK G +++ I+G++LLD+Y K G + + +VF+ +W +I++
Sbjct: 440 QGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSV 499
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
D EM +G+ PD T L +L +C + +G+ + + K E +
Sbjct: 500 HFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKS-GFESNV 558
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
+ +++M + G LE ++ + + +L+ A ++G G++ A
Sbjct: 559 PIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYGE---GKKALKAFQD 614
Query: 555 MEPAG 559
ME +G
Sbjct: 615 MELSG 619
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 238/440 (54%), Gaps = 11/440 (2%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM-PNKDSVSWNAILSGYTQDG 137
+HSLI+ GL V LI+ Y++ + + VF + P + WN+I+ T +G
Sbjct: 41 VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ +A+ EM K L+ D +F S ++C +LELG +H +++MG+ + + +G
Sbjct: 101 LF-TQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIG 159
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVC 252
N L+ YS+ +A VF M +R+ +SW ++IS EDA+ ++ + R+ G+
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ T ++ A VKEG +HG+ K + + N L++MY +FE ++++ +V
Sbjct: 220 PDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDIS 372
F +++ ++ ++WN +I GYAQ G A+V+ F +I P+ + S + A G + D
Sbjct: 280 FSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGD-- 337
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L+ G+ H ++I G + D + + L+DMY K G + +Q VF+ T+ K W ++I+
Sbjct: 338 LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLING 397
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
+ G Y+ + FK M+ + +PDS+TF+ +L++ + I++GR + ++K + E
Sbjct: 398 YTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIK-FGFEA 455
Query: 493 SPDHYSCMVDMLGRVGRLEE 512
+ ++D+ + G +++
Sbjct: 456 ELIIGNSLLDVYAKCGEMDD 475
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 204/413 (49%), Gaps = 18/413 (4%)
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTM 231
KN + +H + I G V L+S Y++ + + VFR + NV W ++
Sbjct: 33 KNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSI 92
Query: 232 ISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I + A+ + EMR + P+ TF +I++ + ++ G ++H ++ F
Sbjct: 93 IRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGF 152
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S+ + N LI MY+RF + ++ VF+E+S R+ +SWN+LISGY NG A+ +
Sbjct: 153 ESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHK 212
Query: 347 V-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ P+ +T SVL A G+ +++K G H I K+G+ D I+G+ LL MY K
Sbjct: 213 FRMTGMVPDCFTMSSVLLACGSL--MAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
+ E++RVF++ K W +I A+ G +E+ + F +M + G PD ++ S +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTI 329
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIPGG 523
CG++G + G+ + ++ D +C ++DM + G L A+E+
Sbjct: 330 RACGQSGDLQVGKFVHKYLIGSGF---ECDTVACNILIDMYAKCGDLLAAQEVFDTTKCK 386
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKME-PAGSGSYVLMSNLYAEKGD 575
++ SL+ G + G + +MKME S ++VL+ +++++ D
Sbjct: 387 DSVT-WNSLINGYTQSGYYKEGLE-SFKMMKMERKPDSVTFVLLLSIFSQLAD 437
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 6/220 (2%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS-CR 319
L+ +S + R +H L I + LI+ YA+ + S VF +S
Sbjct: 25 LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTN 84
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQ 377
+ WN++I NGL A+ ++ ++E K P+A+TF SV+N+ D+ L G
Sbjct: 85 NVYLWNSIIRALTHNGLFTQAL-GYYTEMREKKLQPDAFTFPSVINSCARILDLEL--GC 141
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
H H +++G +SD +G+AL+DMY + + ++ VF E + +W ++IS +G
Sbjct: 142 IVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNG 201
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
+E ++ + + G+ PD T SVL CG + +G
Sbjct: 202 FWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/655 (34%), Positives = 357/655 (54%), Gaps = 32/655 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK-----SDDALSFALRMNLIGVVF 55
+N+Y K + +A +F + N D+VSWN +++G+ + S + RM
Sbjct: 47 VNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAP 106
Query: 56 DAVTYS---TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
+A T++ TA S +D G G H++ +K +V+VG++L+ MY + G EAR
Sbjct: 107 NAHTFAGVFTAASTLVDAAG---GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEAR 163
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGH 171
+VFD MP ++SVSW ++SGY EA L L +MR+ + FTS SA
Sbjct: 164 KVFDTMPERNSVSWATMISGYASQ-KLAAEA-LGLFRLMRREEEGENEFVFTSVLSALTL 221
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+ + GKQIH +++K G + VSVGN L++ Y+KC DA + F D+N I+W+ M
Sbjct: 222 PELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAM 281
Query: 232 I-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I S + + A+ LF M L G+ P++ TF+G+I+A S EG+ +H +K F
Sbjct: 282 ITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGF 341
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG-----LSLAAV 341
S+ V L+ MYA+ S+ D+ K FD L +I+ W ++I GY QNG LSL
Sbjct: 342 ESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGR 401
Query: 342 QAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
G++ PN T SVL A + +L+ G++ H+ +K G + +GSAL M
Sbjct: 402 MEMEGIL----PNELTMASVLKACSSLA--ALEQGKQIHARTVKYGFGLEVPIGSALSTM 455
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K G + + VF + +W A+IS L+++G + + F+EM+ +G +PD +TF
Sbjct: 456 YAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTF 515
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+++L+ C G++ +G F M ++ ++P +HY+CMVD+L R G+L+EA E
Sbjct: 516 VNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESAT 575
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAI 581
G+ + + +LGACR + N E+G + LM++ S +YVL+S++Y+ G WE V
Sbjct: 576 IDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVER 635
Query: 582 LRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+R+ MK +GV KE G SW ++ G+H F D HP+ +I+ L +MK
Sbjct: 636 VRRMMKLRGVSKEPGCSWIELK--SGVHVFVVKDQMHPQIGDIHVELRQLSKQMK 688
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 259/474 (54%), Gaps = 17/474 (3%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
++ TAL + G LH+ I+K S VY+ N+L+ +Y++ RL EA+ VF+ +
Sbjct: 8 SFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERI 66
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLEL 177
NKD VSWN I++GY+Q G G ++ L + MR + + +F +A +
Sbjct: 67 QNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAG 126
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+ H V+IKM V VG+ LM+ Y K +T +A KVF M +RN +SW TMIS
Sbjct: 127 GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYAS 186
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF+ MR + N+ F ++ A+++ LV G+ IH + +K LS SV
Sbjct: 187 QKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSV 246
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
N L+TMYA+ S+ D+ + F+ S + I+W+A+I+GYAQ+G S A++ F + +
Sbjct: 247 GNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGI 306
Query: 352 KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+P+ +TF V+NA +GAA + G++ H +++K+G +S V +AL+DMY K SI
Sbjct: 307 RPSEFTFVGVINACSDLGAAWE-----GKQVHDYLLKLGFESQIYVMTALVDMYAKCSSI 361
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++++ F+ QE WT++I ++G+ E ++ + ME +G+ P+ +T SVL C
Sbjct: 362 VDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKAC 421
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+ +G+ + +K Y S + M + G L++ + ++P
Sbjct: 422 SSLAALEQGKQIHARTVK-YGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPA 474
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/645 (34%), Positives = 353/645 (54%), Gaps = 15/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y K D A +F+ L +W T+++G+ K S +L +M V D
Sbjct: 183 IDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDK 242
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS CL + G Q+H +++ G+ +V + N I Y + ++ R++FD
Sbjct: 243 YVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDR 302
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +K+ VSW +++G Q+ + +A+ +EM R G D TS ++CG LE
Sbjct: 303 MVDKNVVSWTTVIAGCMQNS-FHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEK 361
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR 236
G+Q+H +IK+ V N L+ Y+KC+ DA KVF M +++S+ MI +R
Sbjct: 362 GRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSR 421
Query: 237 ED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+D A+ LF+EMRL P + F+ L+ + ++ IHGL IK +
Sbjct: 422 QDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFA 481
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
+ LI +Y++ + D+ VF+E+ ++I+ W A+ SGY Q + +++ + + +
Sbjct: 482 GSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRL 541
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN +TF +V+ A A+ SL+HGQ+ H+ +IK+G D DP V + L+DMY K GSI E+
Sbjct: 542 KPNEFTFAAVITA--ASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEA 599
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ F T K W ++I+ A+HG+ E + F++M +G++P+ +TF+ VL+ C
Sbjct: 600 HKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHT 659
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ G FDSM + IEP +HY CMV +LGR G+L EA+E + ++P V +S
Sbjct: 660 GLLDLGFDHFDSM-SQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRS 718
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACR+ GNVE+G A+ + PA SGSYVL+SN++A KG W V LR+ M GV
Sbjct: 719 LLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGV 778
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
KE G SW +V + +H F + D H S I + + L ++K
Sbjct: 779 VKEPGCSWIEVN--NEIHKFIAKDTAHRDSAPISLVLDNLLLQIK 821
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 158/529 (29%), Positives = 270/529 (51%), Gaps = 22/529 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS----FALRMNLIGVVFD 56
++ Y K + A +F+ +++ ++V+W++++S + L F M +
Sbjct: 81 LHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPN 140
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ + C G LQ+H L+VK G +VYV +LI Y++ + +AR +FD
Sbjct: 141 EYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFD 200
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNL 175
+ K S +W I++GY++ G V L L + M++G + D +S SAC K L
Sbjct: 201 GLQVKTSFTWTTIIAGYSKQGRSQVS--LKLFDQMKEGHVCPDKYVLSSVLSACLMLKFL 258
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
E GKQIH ++ G VS+ N + Y KC K+F RM D+NV+SWTT+I
Sbjct: 259 EGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGC 318
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV--KEGRMIHGLCIKTNFL 287
S +R DA+ LF EM G P+ +++ S G+LV ++GR +H IK N
Sbjct: 319 MQNSFHR-DALDLFVEMARMGWNPDAFGCTSVLN--SCGSLVALEKGRQVHAYAIKVNID 375
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
++ V N LI MYA+ +S+ D+ KVF+ ++ +++S+NA+I GY++ A+ F +
Sbjct: 376 NDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREM 435
Query: 348 -IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ S P F S+L + + L + H IIK G+ D GSAL+D+Y K
Sbjct: 436 RLSLSSPTLLIFVSLLGVSASLYHLEL--SNQIHGLIIKYGVSLDEFAGSALIDVYSKCS 493
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ +++ VF E Q+K WTA+ S + + E + +K ++ ++P+ TF +V+T
Sbjct: 494 RVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVIT 553
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+ G+ + ++K + P + +VDM + G +EEA +
Sbjct: 554 AASNIASLRHGQQFHNQVIK-MGFDDDPFVANTLVDMYAKSGSIEEAHK 601
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 225/451 (49%), Gaps = 12/451 (2%)
Query: 78 QLHSLIVKFGLDS-EVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
++HS IV FG ++++ N L+ YS+ + A ++FD M +K+ V+W++++S YT
Sbjct: 59 KIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHH 118
Query: 137 GDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+ +EA++ ++ MR + + S AC L QIHG+ +K GY V
Sbjct: 119 S-HCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVY 177
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDG 250
V L+ Y+K DA +F + + +WTT+I+ + ++ LF +M+
Sbjct: 178 VCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGH 237
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
VCP+ ++ A + ++ G+ IH +++ + + S+ N I Y + +Q
Sbjct: 238 VCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGR 297
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAE 369
K+FD + + ++SW +I+G QN A+ F + + P+A+ SVLN+ G+
Sbjct: 298 KLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSL- 356
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
++L+ G++ H++ IKV +D+D V + L+DMY K S+ ++++VFN ++ A+
Sbjct: 357 -VALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAM 415
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I +R ++ F+EM P + F+S+L V + + ++K Y
Sbjct: 416 IEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIK-YG 474
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ S ++D+ + R+ +A + +I
Sbjct: 475 VSLDEFAGSALIDVYSKCSRVGDARLVFEEI 505
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 173/347 (49%), Gaps = 13/347 (3%)
Query: 179 KQIHGVSIKMGYGTH-VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
K+IH + G+ H + + N L+ YSK + ANK+F M +N+++W++M+SM
Sbjct: 58 KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117
Query: 238 -----DAVSLFKE-MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+A+ LF + MR PN+ ++ A + + IHGL +K ++ +
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVY 177
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VC LI Y + + D+ +FD L + +W +I+GY++ G S +++ F +KE
Sbjct: 178 VCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLK-LFDQMKEG 236
Query: 352 K--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ Y SVL+A + L+ G++ H ++++ G+ D + + +D Y K +
Sbjct: 237 HVCPDKYVLSSVLSACLMLK--FLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQ 294
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++F+ +K+ +WT +I+ ++ + ++ F EM G PD+ SVL CG
Sbjct: 295 LGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCG 354
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ KGR + +K +I+ + ++DM + L +A ++
Sbjct: 355 SLVALEKGRQVHAYAIK-VNIDNDDFVKNGLIDMYAKCDSLTDARKV 400
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/634 (33%), Positives = 360/634 (56%), Gaps = 14/634 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ +Y + G F A +FN + D VS+N+++SG + SD AL +M L + D
Sbjct: 313 VTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDC 372
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT ++ LS C L G Q HS +K G+ S++ + AL+ +Y + + A F
Sbjct: 373 VTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLS 432
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
++ V WN +L Y + E+ +M +G+ + ++ S C + ++L
Sbjct: 433 TETENVVLWNVMLVAYGLLDNLN-ESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDL 491
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+QIH +K G+ +V V +VL+ Y+K A K+FRR+ +++V+SWT MI+ +
Sbjct: 492 GEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQ 551
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A++LFKEM+ G+ +++ F I A + + +G+ IH + + + SV
Sbjct: 552 HEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSV 611
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+++YAR ++D+ FD++ ++ ISWN+LISG+AQ+G A+ F + K +
Sbjct: 612 GNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQ 671
Query: 353 P-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
N++TFG ++A ++ L G++ H+ IIK G DS+ V + L+ +Y K G+I ++
Sbjct: 672 EINSFTFGPAVSAAANVANVKL--GKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDA 729
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+R F E EK+E +W A+++ ++HG ++ F++M+ GV P+ +TF+ VL+ C
Sbjct: 730 ERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHV 789
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G F SM + + + P P+HY+C+VD+LGR G L A V ++P P V ++
Sbjct: 790 GLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRT 849
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL AC +H N+++GE A L+++EP S +YVL+SN+YA G W R+ MK +GV
Sbjct: 850 LLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGV 909
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+KE G SW +V + +H F +GD HP ++IY
Sbjct: 910 KKEPGRSWIEVN--NSVHAFFAGDQKHPNVDKIY 941
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 151/530 (28%), Positives = 266/530 (50%), Gaps = 13/530 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K+G + A +F+ L D VSW +LSG +S ++A+ +M+ GV
Sbjct: 212 IDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTP 271
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+S+ LS C E + G QLH L++K G E YV NAL+T+YSR G + A +VF+
Sbjct: 272 YIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNA 331
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VS+N+++SG +Q G Y +A+ +M L+ D V+ S SAC L +
Sbjct: 332 MLQRDEVSYNSLISGLSQQG-YSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLV 390
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GKQ H +IK G + + + L+ Y KC A++ F NV+ W M+
Sbjct: 391 GKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGL 450
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++ +F +M+++G+ PN T+ ++ S V G IH +KT F V
Sbjct: 451 LDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYV 510
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LI MYA+ + + K+F L ++++SW A+I+GYAQ+ A+ F + +
Sbjct: 511 SSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGI 570
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ F S ++A + +L GQ+ H+ G D VG+AL+ +Y + G + ++
Sbjct: 571 HSDNIGFASAISACAGIQ--ALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDA 628
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
F++ K +W ++IS A+ G E ++ F +M G +S TF ++
Sbjct: 629 YFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANV 688
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ G+ + ++K H + + + ++ + + G +++AE ++P
Sbjct: 689 ANVKLGKQIHAMIIKTGH-DSETEVSNVLITLYAKCGNIDDAERQFFEMP 737
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 251/523 (47%), Gaps = 25/523 (4%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA----LSFALRMNLIGVVFDAVTYS 61
K QF + IF + NT LS +D+ ++F M GV ++ TY
Sbjct: 15 KIKQFRPVVSIFFFFQK--FLEHNTALSYAYSNDEGEANGINFLHLMEERGVRANSQTYL 72
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
L CL F G +LH I+K G +EV + L+ +Y +G L A VFDEMP +
Sbjct: 73 WLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVR 132
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIE-MMRKGLRLDHVSFTSAASACGH-EKNLELGK 179
WN +L + G +L L M+++ ++ D ++ CG + +
Sbjct: 133 PLSCWNKVLHRFVAGKMAG--RVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVE 190
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM----- 234
+IH +I GY + V N L+ Y K A KVF + R+ +SW M+S
Sbjct: 191 KIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSG 250
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
E+AV LF +M GV P F ++ A + K G +HGL +K F E VCN
Sbjct: 251 CEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCN 310
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
L+T+Y+R + +E+VF+ + R+ +S+N+LISG +Q G S A++ F + + KP
Sbjct: 311 ALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKP 370
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ T S+L+A + +L G++ HS+ IK G+ SD I+ ALLD+Y K I +
Sbjct: 371 DCVTVASLLSACSSVG--ALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHE 428
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
F T+ ++ W ++ A + F +M+ +G+ P+ T+ S+L C
Sbjct: 429 FFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRA 488
Query: 474 IHKGRHLFDSMLK---DYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ G + +LK +++ S S ++DM ++G+L+ A
Sbjct: 489 VDLGEQIHTQVLKTGFQFNVYVS----SVLIDMYAKLGKLDHA 527
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/645 (32%), Positives = 349/645 (54%), Gaps = 16/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDA 57
+++Y K G+ + A +F + + V+WN +L+G+ + D L M + V +
Sbjct: 255 VDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNE 314
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +T L C + + G +HSLI+K G + ++G L+ MYS+ G ++A VF
Sbjct: 315 FTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKT 374
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL-DHVSFTSAASACGHEKNLE 176
+ D V W+A+++ Q G E + L +MR G L + + S SA + NL+
Sbjct: 375 IKKPDIVVWSALITCLDQQGQ--SEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+ IH K G+ T V+V N L++ Y K D K++ M DR++ISW +S
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +++F M +G PN TFI ++ + S V GR +H IK
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNF 552
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VC LI MYA+ ++D++ F+ LS R++ +W +I+ YAQ A+ F + +E
Sbjct: 553 VCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEG 612
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN +T L+ G + SL+ GQ+ HS + K G SD VGSAL+DMY K G + E
Sbjct: 613 VKPNEFTLAGCLS--GCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEE 670
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F + AW II A++G + F+ M ++G+ PD +TF +L+ C
Sbjct: 671 AEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSH 730
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G+ F+SM +D+ I P+ DH +CMVD+LGRVG+ +E E+ + ++ + +
Sbjct: 731 QGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWE 790
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
++LGA ++H N+ +GE+ A+ L +++P SY+L+SN++A +G W+ V +R M SKG
Sbjct: 791 TVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKG 850
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
V+KE G SW + +H F S D +HP+ +EI+ + L E+
Sbjct: 851 VKKEPGCSWVEAN--GQVHTFVSHDYSHPQIQEIHLKLDELDREL 893
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 161/528 (30%), Positives = 276/528 (52%), Gaps = 19/528 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+N+Y K A + + + D+VSW ++ G ++D++ M G++ +
Sbjct: 154 VNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNE 213
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +T L C G Q+H+ K GL +++VG+AL+ +Y++ G + A ++F
Sbjct: 214 FTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIG 273
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP ++ V+WN +L+GY Q GD V +L L MM ++ + + T+ C + KNL+
Sbjct: 274 MPEQNDVTWNVLLNGYAQRGD--VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLK 331
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+ IH + IK GY + +G L+ YSKC + DA VF+ + +++ W+ +I+
Sbjct: 332 QGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLD 391
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E+++ LF MRL PN T L+ A + ++ G+ IH K F ++ +
Sbjct: 392 QQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVA 451
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L+TMY + + D K+++ + R++ISWNA +SG G+ + F+ +++E
Sbjct: 452 VSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEG 511
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
PN YTF S+L + D+ +G++ H+HIIK LD + V +AL+DMY K + +
Sbjct: 512 FIPNMYTFISILGSCSCLFDV--HYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLED 569
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ FN + F WT II+ A+ E +N F++M+ +GV+P+ T L+ C
Sbjct: 570 ADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSS 629
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEEL 516
+ G+ L + K H+ D + S +VDM + G +EEAE L
Sbjct: 630 LASLEGGQQLHSMVFKSGHVS---DMFVGSALVDMYAKCGCMEEAEAL 674
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 237/464 (51%), Gaps = 16/464 (3%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
YS+ L C +H LIVK ++ + ++ +L+ +Y++ AR V +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++D VSW A++ G +G + ++I EM +G+ + + + AC L+LGK
Sbjct: 175 DRDVVSWTALIQGLVAEG-FANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGK 233
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNRE 237
Q+H + K+G + VG+ L+ Y+KC A+K+F M ++N ++W +++ R
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293
Query: 238 DAVSLFK----EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
D + K M LD C N+ T ++ + +K+G++IH L IK + +
Sbjct: 294 DVTGVLKLFCSMMELDVKC-NEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIG 352
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESK 352
L+ MY++ D+ VF + +I+ W+ALI+ Q G S +++ F + + ++
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL 412
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN YT S+L+A A +L++GQ H+ + K G ++D V +AL+ MY K G + +
Sbjct: 413 PNQYTICSLLSA--ATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+++ ++ +W A +S L G Y+ + F M +G P+ TF+S+L C
Sbjct: 471 KLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLF 530
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAE 514
+H GR + ++K+ + +++ C ++DM + LE+A+
Sbjct: 531 DVHYGRQVHAHIIKN---QLDDNNFVCTALIDMYAKCMYLEDAD 571
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/645 (32%), Positives = 349/645 (54%), Gaps = 16/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDA 57
+++Y K G+ + A +F + + V+WN +L+G+ + D L M + V +
Sbjct: 255 VDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNE 314
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +T L C + + G +HSLI+K G + ++G L+ MYS+ G ++A VF
Sbjct: 315 FTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKT 374
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL-DHVSFTSAASACGHEKNLE 176
+ D V W+A+++ Q G E + L +MR G L + + S SA + NL+
Sbjct: 375 IKKPDIVVWSALITCLDQQGQ--SEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQ 432
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+ IH K G+ T V+V N L++ Y K D K++ M DR++ISW +S
Sbjct: 433 YGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +++F M +G PN TFI ++ + S V GR +H IK
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNF 552
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VC LI MYA+ ++D++ F+ LS R++ +W +I+ YAQ A+ F + +E
Sbjct: 553 VCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEG 612
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN +T L+ G + SL+ GQ+ HS + K G SD VGSAL+DMY K G + E
Sbjct: 613 VKPNEFTLAGCLS--GCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEE 670
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F + AW II A++G + F+ M ++G+ PD +TF +L+ C
Sbjct: 671 AEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSH 730
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G+ F+SM +D+ I P+ DH +CMVD+LGRVG+ +E E+ + ++ + +
Sbjct: 731 QGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWE 790
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
++LGA ++H N+ +GE+ A+ L +++P SY+L+SN++A +G W+ V +R M SKG
Sbjct: 791 TVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKG 850
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
V+KE G SW + +H F S D +HP+ +EI+ + L E+
Sbjct: 851 VKKEPGCSWVEAN--GQVHTFVSHDYSHPQIQEIHLKLDELDREL 893
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 161/528 (30%), Positives = 276/528 (52%), Gaps = 19/528 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+N+Y K A + + + D+VSW ++ G ++D++ M G++ +
Sbjct: 154 VNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNE 213
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +T L C G Q+H+ K GL +++VG+AL+ +Y++ G + A ++F
Sbjct: 214 FTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIG 273
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP ++ V+WN +L+GY Q GD V +L L MM ++ + + T+ C + KNL+
Sbjct: 274 MPEQNDVTWNVLLNGYAQRGD--VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLK 331
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+ IH + IK GY + +G L+ YSKC + DA VF+ + +++ W+ +I+
Sbjct: 332 QGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLD 391
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E+++ LF MRL PN T L+ A + ++ G+ IH K F ++ +
Sbjct: 392 QQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVA 451
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L+TMY + + D K+++ + R++ISWNA +SG G+ + F+ +++E
Sbjct: 452 VSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEG 511
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
PN YTF S+L + D+ +G++ H+HIIK LD + V +AL+DMY K + +
Sbjct: 512 FIPNMYTFISILGSCSCLFDV--HYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLED 569
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ FN + F WT II+ A+ E +N F++M+ +GV+P+ T L+ C
Sbjct: 570 ADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSS 629
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEEL 516
+ G+ L + K H+ D + S +VDM + G +EEAE L
Sbjct: 630 LASLEGGQQLHSMVFKSGHVS---DMFVGSALVDMYAKCGCMEEAEAL 674
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 237/464 (51%), Gaps = 16/464 (3%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
YS+ L C +H LIVK ++ + ++ +L+ +Y++ AR V +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++D VSW A++ G +G + ++I EM +G+ + + + AC L+LGK
Sbjct: 175 DRDVVSWTALIQGLVAEG-FANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGK 233
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNRE 237
Q+H + K+G + VG+ L+ Y+KC A+K+F M ++N ++W +++ R
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293
Query: 238 DAVSLFK----EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
D + K M LD C N+ T ++ + +K+G++IH L IK + +
Sbjct: 294 DVTGVLKLFCSMMELDVKC-NEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIG 352
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESK 352
L+ MY++ D+ VF + +I+ W+ALI+ Q G S +++ F + + ++
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL 412
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN YT S+L+A A +L++GQ H+ + K G ++D V +AL+ MY K G + +
Sbjct: 413 PNQYTICSLLSA--ATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+++ ++ +W A +S L G Y+ + F M +G P+ TF+S+L C
Sbjct: 471 KLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLF 530
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAE 514
+H GR + ++K+ + +++ C ++DM + LE+A+
Sbjct: 531 DVHYGRQVHAHIIKN---QLDDNNFVCTALIDMYAKCMYLEDAD 571
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/597 (34%), Positives = 346/597 (57%), Gaps = 13/597 (2%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
M L GV + +T+ L+ +D + G +HS + + +V+V AL+ Y++ G
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
L +AR+VFD MP + +WN+++S Y+ G EA M +G R D V+F S
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSG-EAFFIFQRMQHEGERCDRVTFLSILD 119
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
AC + +NL+ GK + + + + VG L++ Y++C +A +VF RM +N+I+
Sbjct: 120 ACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLIT 179
Query: 228 WTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
W+ +I+ + +A+ F+ M+ +G+ PN VTFI L++ + + ++E IH L
Sbjct: 180 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 239
Query: 283 KTNFLSEPSVCNCLITMYARFES--MQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+ ++ N L+ +Y R E+ + +E + E+ ++I +WN LI+GY +G S A
Sbjct: 240 EHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREA 299
Query: 341 VQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
++ + + E+ P + TF SVLNA ++ SL G+ HS+ ++ GLDSD IV +AL
Sbjct: 300 LETYQRLQLEAIPVDKVTFISVLNACTSS--TSLAEGKMIHSNAVECGLDSDVIVKNALT 357
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
+MY K GS+ ++R+F+ +S +W ++ A A+HG+ E V+ ++ME +GV+ + I
Sbjct: 358 NMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGI 417
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
TF+SVL+ C G+I +G F S+ D IE +HY C+VD+LGR G+L+EAE+ + +
Sbjct: 418 TFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISK 477
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P P + SLLGACR+H +++ G+ A L++++P S + V++SN+Y+E+GDW+
Sbjct: 478 MPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNA 537
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
A LR+ M S+ V+K G S V + +H F D +HPR+ EIY E L M+
Sbjct: 538 AKLRRAMASRRVKKVPGISSIQVK--NKVHEFRVRDTSHPRAAEIYDKVEELCFAMR 592
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 231/454 (50%), Gaps = 18/454 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+N Y K G A +F+ + + +WN+++S + E+S +A RM G D
Sbjct: 52 VNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDR 111
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ + L C++ E G + I + + +++VG ALITMY+R A +VF
Sbjct: 112 VTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGR 171
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ ++W+AI++ + G G EA+ M ++G+ + V+F S + LE
Sbjct: 172 MKQKNLITWSAIITAFADHGHCG-EALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEE 230
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD---ANKVFRRMHDRNVISWTTMIS- 233
+IH + + G ++ N L++ Y +CE TG+ A + + M ++ + +W +I+
Sbjct: 231 LSRIHLLITEHGLDDTTTMSNALVNVYGRCE-TGELDVAEVILQEMDEQQITAWNVLING 289
Query: 234 -----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+RE A+ ++ ++L+ + + VTFI +++A + + EG+MIH ++ S
Sbjct: 290 YTLHGRSRE-ALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDS 348
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ V N L MY++ SM+++ ++FD + R +SWN ++ YAQ+G S ++ +
Sbjct: 349 DVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKME 408
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+E K N TF SVL++ A I+ + Q HS G++ L+D+ G+ G
Sbjct: 409 QEGVKLNGITFVSVLSSCSHAGLIA-EGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGK 467
Query: 408 IFESQRVFNETQEKSEF-AWTAIISALARHGDYE 440
+ E+++ ++ + E W +++ A H D +
Sbjct: 468 LQEAEKYISKMPSEPEIVTWASLLGACRVHKDLD 501
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 221/645 (34%), Positives = 348/645 (53%), Gaps = 19/645 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y + G+ D +F+ + D V WN +L+G+ K D + M + + +AVT+
Sbjct: 183 YLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTF 242
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
LS C G+QLH L+V G+D E + N+L++MYS+ GR +A ++F M
Sbjct: 243 DCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
D+V+WN ++SGY Q G E++ EM+ G+ D ++F+S + +NLE KQ
Sbjct: 303 ADTVTWNCMISGYVQSG-LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQ 361
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE--- 237
IH ++ + + + L+ Y KC A +F + + +V+ +T MIS
Sbjct: 362 IHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGL 421
Query: 238 --DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
D++ +F+ + + PN++T + ++ I I +K GR +HG IK F + ++
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVIKESKP 353
+I MYA+ M + ++F+ LS R+I+SWN++I+ AQ+ AA+ F GV
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV----SG 537
Query: 354 NAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
Y S+ A+ A ++ S G+ H +IK L SD S L+DMY K G++ +
Sbjct: 538 ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAM 597
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRN 471
VF +EK+ +W +II+A HG + + F EM E G+RPD ITFL +++ C
Sbjct: 598 NVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHV 657
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + +G F SM +DY I+P +HY+C+VD+ GR GRL EA E V +P P V +
Sbjct: 658 GDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGT 717
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGACR+H NVE+ E + LM ++P+ SG YVL+SN +A +WE V +R MK + V
Sbjct: 718 LLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREV 777
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K G+SW ++ H F SGD HP S IY + L E++
Sbjct: 778 QKIPGYSWIEIN--KRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/555 (25%), Positives = 278/555 (50%), Gaps = 18/555 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLN--NPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVF 55
+ MY G F +F L+ I WN+++S F ++ + AL+F +M GV
Sbjct: 77 LGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSP 136
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T+ + C+ + F L + G+D +V ++LI Y +G++ ++F
Sbjct: 137 DVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLF 196
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKN 174
D + KD V WN +L+GY + G +++++ +MR + + V+F S C +
Sbjct: 197 DRVLQKDCVIWNVMLNGYAKCG--ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
++LG Q+HG+ + G S+ N L+S YSKC DA+K+FR M + ++W MIS
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISG 314
Query: 235 N-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
E++++ F EM GV P+ +TF L+ ++S ++ + IH ++ + +
Sbjct: 315 YVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLD 374
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ + LI Y + + ++ +F + + +++ + A+ISGY NGL + +++ F ++K
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Query: 350 -ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ PN T S+L +G ++LK G+ H IIK G D+ +G A++DMY K G +
Sbjct: 435 VKISPNEITLVSILPVIGIL--LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRM 492
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ +F ++ +W ++I+ A+ + + ++ F++M G+ D ++ + L+ C
Sbjct: 493 NLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G+ + M+K + + S ++DM + G L+ A + + +S
Sbjct: 553 ANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS- 610
Query: 529 LQSLLGACRIHGNVE 543
S++ AC HG ++
Sbjct: 611 WNSIIAACGNHGKLK 625
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 220/453 (48%), Gaps = 12/453 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV--SWNAILSGY 133
G Q+H+ ++ + + Y ++ MY+ G + ++F + + S WN+I+S +
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSF 113
Query: 134 TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
++G +A+ +M+ G+ D +F AC KN + + +G +
Sbjct: 114 VRNGLLN-QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCN 172
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRL 248
V + L+ Y + +K+F R+ ++ + W M++ + + F MR+
Sbjct: 173 EFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM 232
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
D + PN VTF ++ + L+ G +HGL + + E S+ N L++MY++ D
Sbjct: 233 DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD 292
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGA 367
+ K+F +S + ++WN +ISGY Q+GL ++ F+ +I P+A TF S+L +V
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
E+ L++ ++ H +I++ + D + SAL+D Y K + +Q +F++ +T
Sbjct: 353 FEN--LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
A+IS +G Y + F+ + + P+ IT +S+L V G + GR L ++K
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ + ++DM + GR+ A E+ ++
Sbjct: 471 -GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 12/288 (4%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
L+ A S NL+++G+ +H I + + ++ MYA S D K+F L R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 321 --IISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQ 377
I WN++IS + +NGL A+ +F ++ P+ TF ++ A A ++ K
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKN--FKGID 158
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
+ +G+D + V S+L+ Y + G I ++F+ +K W +++ A+ G
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
+SV+ F M + P+++TF VL+VC +I G L ++ ++
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL-HGLVVVSGVDFEGSIK 277
Query: 498 SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+ ++ M + GR ++A +L +S ++ C I G V+ G
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRM------MSRADTVTWNCMISGYVQSG 319
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/658 (33%), Positives = 352/658 (53%), Gaps = 22/658 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-LSFALRMNLI--GVVFDA 57
++ Y K G D A +F+ L V+W T++SG K + +S L L+ VV D
Sbjct: 190 IDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDG 249
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
ST LS C G Q+H+ I+++G + + + N LI Y + GR+ A ++FD
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDG 309
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MPNK+ +SW +LSGY Q+ + EA+ M + GL+ D + +S ++C LE
Sbjct: 310 MPNKNIISWTTLLSGYKQNSLHK-EAMELFTSMPKFGLKPDMFACSSILTSCASLHALEF 368
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G Q+H +IK G V N L+ Y+KC+ +A KVF +V+ + MI
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSR 428
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
DA+++F +MR + P+ +TF+ L+ A + + + IHGL K +
Sbjct: 429 LGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLD 488
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-I 348
+ LI +Y+ ++DS VFDE+ ++++ WN++ SGY Q + A+ F + +
Sbjct: 489 IFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQL 548
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+P+ +TF ++ A G SL+ GQ H ++K GL+ +P + +ALLDMY K GS
Sbjct: 549 SRDRPDEFTFVDMVTAAGNLA--SLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ + F+ + W ++IS+ A HG+ + ++M +G+ P+ ITF+ VL+ C
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSAC 666
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ G F+ ML+ + IEP +HY CMV +LGR GRL EA EL+ ++P P V
Sbjct: 667 SHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIV 725
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+SLL C GNVE+ E A+ + +P SGS+ L+SN+YA KG W +R+ MK
Sbjct: 726 WRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKF 785
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSE----MKYLNSKR 642
+GV KE G SW ++ +H F S D +H ++ +IY + + L + MK +N R
Sbjct: 786 EGVVKEPGRSWIEIN--KEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGHMKLINDGR 841
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/531 (29%), Positives = 267/531 (50%), Gaps = 21/531 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS-----GFEKSDDALSFALRMNLIGVVF 55
MN+Y ++G A +F + ++V+W+T++S GF + + + F
Sbjct: 86 MNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYE-ESLVVFLDFWRTRKNSP 144
Query: 56 DAVTYSTALSFC--LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
+ S+ + C LD G QL S +VK D +VYVG LI Y + G + AR
Sbjct: 145 NEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARL 204
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VFD +P K +V+W ++SG + G V L ++M + D ++ SAC
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQL-FYQLMEGNVVPDGYILSTVLSACSILP 263
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
LE GKQIH ++ G+ S+ NVL+ +Y KC A+K+F M ++N+ISWTT++S
Sbjct: 264 FLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLS 323
Query: 234 MNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
++ +A+ LF M G+ P+ ++ + + + ++ G +H IK N +
Sbjct: 324 GYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGN 383
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA---AVQAFF 345
+ V N LI MYA+ + + ++ KVFD + +++ +NA+I GY++ G A+ F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFH 443
Query: 346 GV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ + +P+ TF S+L A +A SL ++ H + K GL+ D GSAL+ +Y
Sbjct: 444 DMRFRLIRPSLLTFVSLLRA--SASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSN 501
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
+ +S+ VF+E + K W ++ S + + E +N F E++ RPD TF+ +
Sbjct: 502 CYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDM 561
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+T G + G+ +LK +E +P + ++DM + G E+A +
Sbjct: 562 VTAAGNLASLQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHK 611
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 206/400 (51%), Gaps = 17/400 (4%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H I+ GL+ + Y+ N L+ +YSR G +V AR+VF++MP ++ V+W+ ++S G
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 139 YGVEAILALIEM--MRKGLRLDHV--SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
Y E+++ ++ RK +++ SF A S + Q+ +K + V
Sbjct: 126 YE-ESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRW-MVFQLQSFLVKSRFDRDV 183
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----MNRED-AVSLFKEMRLD 249
VG +L+ Y K A VF + +++ ++WTTMIS M R ++ LF ++
Sbjct: 184 YVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEG 243
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
V P+ ++ A SI ++ G+ IH ++ + S+ N LI Y + ++ +
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAA 303
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
K+FD + + IISW L+SGY QN L A++ F + K KP+ + S+L + +
Sbjct: 304 HKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASL 363
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+L+ G + H++ IK L +D V ++L+DMY K + E+++VF+ + A
Sbjct: 364 H--ALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNA 421
Query: 429 IISALARHG---DYESVMNQFKEMENKGVRPDSITFLSVL 465
+I +R G + +N F +M + +RP +TF+S+L
Sbjct: 422 MIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLL 461
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 3/248 (1%)
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
++HG I + + + N L+ +Y+R M + KVF+++ R +++W+ ++S +G
Sbjct: 65 VVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHG 124
Query: 336 LSLAAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
++ F F +++ PN Y S + A + + S ++K D D
Sbjct: 125 FYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVY 184
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
VG+ L+D Y K G+I ++ VF+ EKS WT +IS + G + F ++
Sbjct: 185 VGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGN 244
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
V PD +VL+ C + G+ + +L+ H E + ++D + GR+ A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGH-EKDASLMNVLIDSYVKCGRVRAA 303
Query: 514 EELVGQIP 521
+L +P
Sbjct: 304 HKLFDGMP 311
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 39/262 (14%)
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
A D L + H II GL+ D + + L+++Y + G + +++VF + E++ W+
Sbjct: 55 ALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWS 114
Query: 428 AIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVC-GRNGM------------ 473
++SA HG YE + F + + P+ S + C G +G
Sbjct: 115 TMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFL 174
Query: 474 --------IHKGRHLFDSMLKDYHI-----------EPSPDHYSCMVDMLGRVGRLEEAE 514
++ G L D LK+ +I E S ++ M+ ++GR +
Sbjct: 175 VKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSL 234
Query: 515 ELVGQIPGG---PGLSVLQSLLGACRIHGNVEMGERIADALMKM--EPAGSGSYVLMSNL 569
+L Q+ G P +L ++L AC I +E G++I +++ E S VL+ +
Sbjct: 235 QLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDS- 293
Query: 570 YAEKGDWEMVAILRKGMKSKGV 591
Y + G L GM +K +
Sbjct: 294 YVKCGRVRAAHKLFDGMPNKNI 315
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/636 (35%), Positives = 357/636 (56%), Gaps = 43/636 (6%)
Query: 17 FNNLNNPDIVSWNTVLSGFEKSDDALS----FALRMNLIGVVFDAVTYSTALSFCLDHEG 72
F+++ N D+ +WN ++SG+ ++ ++ F+L M G+ D T+ + L C
Sbjct: 42 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RT 98
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
+ G ++H L +KFG +VYV +LI +YSR+ + AR +FDEMP +D SWNA++SG
Sbjct: 99 VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 158
Query: 133 YTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
Y Q G+ EA+ + GLR +D V+ S SAC + G IH SIK G
Sbjct: 159 YCQSGN-AKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL- 211
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEM 246
+ E+ D KVF RM+ R++ISW ++I +N + A+SLF+EM
Sbjct: 212 --------------ESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 257
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN-FLSEPSVCNCLITMYARFES 305
RL + P+ +T I L +S ++ R + G ++ FL + ++ N ++ MYA+
Sbjct: 258 RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL 317
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES---KPNAYTFGSVL 362
+ + VF+ L ++ISWN +ISGYAQNG + A++ + +++E N T+ SVL
Sbjct: 318 VDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE-MYNIMEEEGEIAANQGTWVSVL 376
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
A A +L+ G + H ++K GL D V ++L DMYGK G + ++ +F + +
Sbjct: 377 PACSQAG--ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 434
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
W +I+ HG E + FKEM ++GV+PD ITF+++L+ C +G++ +G+ F+
Sbjct: 435 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 494
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
M DY I PS HY CMVDM GR G+LE A + + + P S+ +LL ACR+HGNV
Sbjct: 495 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 554
Query: 543 EMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADV 602
++G+ ++ L ++EP G +VL+SN+YA G WE V +R KG+RK G+S +V
Sbjct: 555 DLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEV 614
Query: 603 GDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+ + F +G+ THP EE+YR L +++K +
Sbjct: 615 D--NKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 648
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 217/455 (47%), Gaps = 39/455 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-----LSFALRMNLIGVVF 55
+++Y + A +F+ + D+ SWN ++SG+ +S +A LS LR
Sbjct: 125 IHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR------AM 178
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D+VT + LS C + F G+ +HS +K GL+SE+ L + ++VF
Sbjct: 179 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL---------------LRDCQKVF 223
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D M +D +SWN+I+ Y + + + AI EM ++ D ++ S AS ++
Sbjct: 224 DRMYVRDLISWNSIIKAYELN-EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI 282
Query: 176 ELGKQIHGVSIKMGYGTH-VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
+ + G +++ G+ +++GN ++ Y+K + A VF + + +VISW T+IS
Sbjct: 283 RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISG 342
Query: 235 NRE-----DAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ +A+ ++ M +G + N T++ ++ A S +++G +HG +K
Sbjct: 343 YAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 402
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ V L MY + ++D+ +F ++ + WN LI+ + +G AV F ++
Sbjct: 403 DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 462
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI-IKVGLDSDPIVGSALLDMYGKRG 406
E KP+ TF ++L+A + + GQ C + G+ ++DMYG+ G
Sbjct: 463 DEGVKPDHITFVTLLSACSHSGLVD--EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAG 520
Query: 407 SIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ + + + + + W A++SA HG+ +
Sbjct: 521 QLETALKFIKSMSLQPDASIWGALLSACRVHGNVD 555
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/646 (32%), Positives = 362/646 (56%), Gaps = 17/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M + G+ A +F + D+ SWN ++ G+ K+ ++AL RM GV D
Sbjct: 136 LSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDV 195
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L C + G ++H+ +++FG EV V NAL+TMY++ G +V AR+VFD
Sbjct: 196 YTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDS 255
Query: 118 MPNKDSVSWNAILSGYTQDGD--YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M D +SWNA+++G+ ++G+ G+E L M++ ++ + ++ TS A G ++
Sbjct: 256 MAVMDCISWNAMIAGHFENGECNAGLELFLT---MLQDEVQPNLMTITSVTVASGLLSDI 312
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
K++HG+++K G+ T V+ N L+ Y+ + G A VF RM R+ +SWT MIS
Sbjct: 313 TFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGY 372
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++ A+ ++ M ++ V P+D+T + A + + G +H L F+S
Sbjct: 373 EKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYV 432
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N L+ MYA+ + + + +VF + ++++SW+++I+G+ N + A+ F ++ +
Sbjct: 433 VVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD 492
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN+ TF + A +L+ G+ H+H+++ G+ + + +AL+D+Y K G
Sbjct: 493 VKPNSVTF--IAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGY 550
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ F K +W +I+ HG+ E+ ++ F +M G PD +TF+++L C R
Sbjct: 551 AWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSR 610
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
GM+ +G LF SM Y I P+ HY+CMVD+L RVG+L EA + ++P P +V
Sbjct: 611 GGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWG 670
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL CRIH +VE+GE A ++++EP +G +VL+ +LYA+ G W+ +A +RK M+ KG
Sbjct: 671 ALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKG 730
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ + G SW +V + +H F + D +HP+ EI + E + MK
Sbjct: 731 LDHDSGCSWVEVKGV--VHAFLTDDESHPQIREINTVLEGIYERMK 774
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 202/400 (50%), Gaps = 12/400 (3%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+GNA+++M R+G A RVF +MP +D SWN ++ GY + G EA+ MM
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLE-EALDLYHRMMWA 189
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G+R D +F +CG + +G+++H ++ G+ V V N LM+ Y+KC A
Sbjct: 190 GVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAA 249
Query: 214 NKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
KVF M + ISW MI+ + E+ + LF M D V PN +T + A +
Sbjct: 250 RKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLL 309
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ + + +HGL +K F ++ + CN LI MYA M + VF + R+ +SW A+I
Sbjct: 310 SDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMI 369
Query: 329 SGYAQNGLSLAAVQAF-FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
SGY +NG A++ + + P+ T S L A SL G + H G
Sbjct: 370 SGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLG--SLDVGVKLHELAESKG 427
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA-RHGDYESVMNQF 446
S +V +ALL+MY K I ++ VF EK +W+++I+ H ++E+ + F
Sbjct: 428 FMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEA-LYYF 486
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ M V+P+S+TF++ L C G + G+ + +L+
Sbjct: 487 RHML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLR 525
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+G+A+L M + G + + RVF + E+ F+W ++ + G E ++ + M G
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
VRPD TF VL CG GR + +L+ + D + ++ M + G + A
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLR-FGFAEEVDVLNALMTMYAKCGDVVAA 249
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
++ ++V+ + I G+ E GE
Sbjct: 250 RKVFDS------MAVMDCISWNAMIAGHFENGE 276
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/643 (32%), Positives = 350/643 (54%), Gaps = 15/643 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MY G + IF+ + N + WN ++S + K +++S +M +GVV + T
Sbjct: 413 MYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYT 472
Query: 60 YSTALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
++ L C G + + +H ++K G S V N+LI Y ++G + A +FDE+
Sbjct: 473 FTCVLK-CFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDEL 531
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
D VSWN++++G +G G + I+M+ G+ +D + S A + NL LG
Sbjct: 532 SEPDVVSWNSMINGCVVNGFSG-NGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLG 590
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-RE 237
+ +HG +K + V N L+ YSKC A +VF +M D ++SWT+ I+ RE
Sbjct: 591 RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVRE 650
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
DA+ LF EM+ GV P+ T ++HA + + + +GR +H IK S V
Sbjct: 651 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVT 710
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N LI MYA+ S++++ VF ++ ++I+SWN +I GY+QN L A++ F + K+ KP
Sbjct: 711 NALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFKP 770
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ T VL A +L G+ H HI++ G SD V AL+DMY K G + +Q
Sbjct: 771 DDITMACVLPACAGLA--ALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQL 828
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F+ +K +WT +I+ HG ++ F EM G+ PD +F +L C +G+
Sbjct: 829 LFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGL 888
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+++G F+SM + +EP +HY+C+VD+L R+G L +A + + +P P ++ LL
Sbjct: 889 LNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLL 948
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
CRIH +V++ E++A+ + ++EP + YV+++N+YAE WE V LRK M+ +G ++
Sbjct: 949 SGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQ 1008
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G SW +VG + F +G++ HP+++ I + L +M+
Sbjct: 1009 NPGCSWIEVG--GKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQ 1049
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 249/471 (52%), Gaps = 15/471 (3%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+Y + L C + + G ++HS+I+ G+ + +G L+ MY G LV+ R++FD++
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
N WN ++S Y + G++ E++ +M + G+ + +FT ++
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNFR-ESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 489
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MN 235
K++HG +K+G+G++ +V N L++ Y K A+ +F + + +V+SW +MI+ +N
Sbjct: 490 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 549
Query: 236 --REDAVSLFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + +F +M + GV + T + ++ A +IGNL GR +HG +K F E
Sbjct: 550 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNL-SLGRALHGFGVKACFSEEVVF 608
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
N L+ MY++ ++ + +VF ++ I+SW + I+ Y + GL A+ F + K
Sbjct: 609 SNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGV 668
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ YT S+++A + SL G+ HS++IK G+ S+ V +AL++MY K GS+ E+
Sbjct: 669 RPDIYTVTSIVHACACSS--SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEA 726
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VF++ K +W +I +++ + F +M+ K +PD IT VL C
Sbjct: 727 RLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGL 785
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSC-MVDMLGRVGRLEEAEELVGQIP 521
+ KGR + +L+ + S H +C +VDM + G L A+ L IP
Sbjct: 786 AALDKGREIHGHILRRGYF--SDLHVACALVDMYAKCGLLVLAQLLFDMIP 834
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 203/403 (50%), Gaps = 16/403 (3%)
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKG--LRLDHVSFTSAASACGHEKNLELGKQIHGV 184
NA ++ + + GD + IE++ K L S+ S C +K+LE GK++H V
Sbjct: 340 NAKINKFCEMGD-----LRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSV 394
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDA 239
I G ++G L+ Y C K+F ++ + V W ++S N ++
Sbjct: 395 IISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRES 454
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
VSLFK+M+ GV N TF ++ + VKE + +HG +K F S +V N LI
Sbjct: 455 VSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAA 514
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTF 358
Y +F ++ + +FDELS +++SWN++I+G NG S ++ F +I + + T
Sbjct: 515 YFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTL 574
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
SVL A ++SL G+ H +K + + + LLDMY K G++ + VF +
Sbjct: 575 VSVLVAWANIGNLSL--GRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 632
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+ + +WT+ I+A R G Y + F EM++KGVRPD T S++ C + + KGR
Sbjct: 633 GDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGR 692
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ ++K+ P + +++M + G +EEA + +IP
Sbjct: 693 DVHSYVIKNGMGSNLPV-TNALINMYAKCGSVEEARLVFSKIP 734
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 177/341 (51%), Gaps = 14/341 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + A +F + + IVSW + ++ + + DA+ M GV D
Sbjct: 613 LDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDI 672
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++ + C G +HS ++K G+ S + V NALI MY++ G + EAR VF +
Sbjct: 673 YTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSK 732
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P KD VSWN ++ GY+Q+ EA L L M+K + D ++ AC L+
Sbjct: 733 IPVKDIVSWNTMIGGYSQNS-LPNEA-LELFLDMQKQFKPDDITMACVLPACAGLAALDK 790
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
G++IHG ++ GY + + V L+ Y+KC + A +F + +++ISWT MI+ M
Sbjct: 791 GREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGM 850
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +A+S F EMR+ G+ P++ +F +++A S L+ EG ++ EP +
Sbjct: 851 HGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFN-SMRNECGVEPKL 909
Query: 293 CN--CLITMYARFESMQDSEKVFDELSCR-EIISWNALISG 330
+ C++ + AR ++ + K + + + + W L+SG
Sbjct: 910 EHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 950
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 124/298 (41%), Gaps = 52/298 (17%)
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFG-----SVLNAVGAAEDISLKHGQRC 379
NA I+ + + G A++ +K +Y G SVL AE SL+ G+R
Sbjct: 340 NAKINKFCEMGDLRNAIELL------TKSKSYELGLNSYCSVLQL--CAEKKSLEDGKRV 391
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
HS II G+ D +G+ L+ MY G + + +++F++ F W ++S A+ G++
Sbjct: 392 HSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNF 451
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC 499
++ FK+M+ GV + TF VL C
Sbjct: 452 RESVSLFKKMQKLGVVGNCYTFTCVL--------------------------------KC 479
Query: 500 MVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
LG+V + V ++ G +V+ SL+ A G VE + D L + +
Sbjct: 480 FA-ALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVS 538
Query: 560 SGSYV--LMSNLYAEKGDWEMVAILRKGMKSK-GVRKEVGFSWADVGDID---GLHGF 611
S + + N ++ G + +L G++ V +WA++G++ LHGF
Sbjct: 539 WNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGF 596
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/646 (33%), Positives = 355/646 (54%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+N Y +S A +F+ + + +S+ T+ G+ + AL F LR+ G +
Sbjct: 77 LNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNP 136
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++T L + + LH+ + K G ++ +VG ALI YS G + AR VFD+
Sbjct: 137 FVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDD 196
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
+ KD VSW +++ Y ++ Y E L L MR G + ++ + + A +C +
Sbjct: 197 ICCKDMVSWTGMVACYAENCFY--EESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFN 254
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
+GK +HG ++K Y + VG L+ Y+K DA ++F M ++I W+ MI
Sbjct: 255 VGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYA 314
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
S ++A+ LF MR V PN+ TF ++ A + + G+ IH +K S
Sbjct: 315 QSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVF 374
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
V N ++ +YA+ +++S K+F+EL R ++WN +I GY Q G A+ F +++ +
Sbjct: 375 VSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHD 434
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P T+ SVL A +A +L+ G + HS IK + D +V ++L+DMY K G I +
Sbjct: 435 MQPTEVTYSSVLRA--SASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRIND 492
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ F++ ++ E +W A+I + HG +N F M++ +P+ +TF+ VL+ C
Sbjct: 493 ARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSN 552
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+++KG+ F+SM KDY I+P +HY+CMV +LGR+GR +EA +L+G+I P + V +
Sbjct: 553 AGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWR 612
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGAC IH V++G A +++MEP ++VL+SN+YA G W+ VA +RK M+ K
Sbjct: 613 ALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKK 672
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
VRKE G SW + + +H FS GD +HP + I M E L + +
Sbjct: 673 VRKEPGLSWVENQGV--VHYFSVGDTSHPDIKLICAMLEWLNKKTR 716
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 226/445 (50%), Gaps = 10/445 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G LH I+K G +++ N L+ Y + L +A ++FDEMP +++S+ + GY++
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
D + +A+ ++ + ++G ++ FT+ L +H K+G+
Sbjct: 114 DHQFH-QALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAF 172
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDG 250
VG L+ YS A VF + ++++SWT M++ E+++ LF +MR+ G
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
PN+ T G + + G+ +HG +K + + V L+ +YA+ + D++
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAE 369
++F+E+ ++I W+ +I+ YAQ+ S A+ F + + S PN +TF SVL A A
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQA--CAS 350
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+SL G++ HS ++K GL+S+ V +A++D+Y K G I S ++F E ++++ W I
Sbjct: 351 SVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTI 410
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I + GD E MN F M ++P +T+ SVL + G + +K +
Sbjct: 411 IVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMY 470
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAE 514
+ + S ++DM + GR+ +A
Sbjct: 471 NKDTVVANS-LIDMYAKCGRINDAR 494
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/589 (35%), Positives = 334/589 (56%), Gaps = 50/589 (8%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
+ N+LI++ ++ G L EA R+F MP D SWN+++SG+ Q D E++ ++M
Sbjct: 81 TFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH-DRFEESLEYFVKMH 139
Query: 152 RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
R+ L+ SF SA SAC +L +G Q+H + K Y T V +G+ L+ YSKC
Sbjct: 140 REDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVA 199
Query: 212 DANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
A +VF M +RN+++W ++I+ + +A+ +F M G+ P++VT ++ A +
Sbjct: 200 CAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACA 259
Query: 267 IGNLVKEGRMIHGLCIKTN-FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS-- 323
+KEG IH +KTN F + + N L+ MYA+ + ++ +VFD +S R ++S
Sbjct: 260 SLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSET 319
Query: 324 -----------------------------WNALISGYAQNGLSLAAVQAFFGVIKESK-P 353
WNALI+GY QNG + A++ F + +ES P
Sbjct: 320 SMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWP 379
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD------SDPIVGSALLDMYGKRGS 407
YTFG++L+A D+ L G++ H+H++K G + SD VG++L+DMY K GS
Sbjct: 380 THYTFGNLLSACANLADLLL--GRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGS 437
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I + RVF + +E+ +W AII A++G + F++M G +PD +T + VL
Sbjct: 438 IEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCA 497
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ +GRH F SM +++ + P DHY+CMVD+LGR G L EA+ L+ +P P
Sbjct: 498 CSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAV 556
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V SLL AC++HGN+EMG+ A+ L++++P SG YVL+SN+YAE G W V +RK M+
Sbjct: 557 VWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMR 616
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+GV K+ G SW +V +H F D +HP ++IY + + L +MK
Sbjct: 617 QQGVTKQPGCSWIEVE--SRVHVFLVKDKSHPHRKQIYSVLKMLTEQMK 663
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 268/582 (46%), Gaps = 101/582 (17%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYST 62
KSG D+A +F ++ PD SWN+++SGF + D ++L + ++M+ + + ++ +
Sbjct: 93 KSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGS 152
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
ALS C G Q+H+L+ K ++VY+G+ALI MYS+ G + A VF M ++
Sbjct: 153 ALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERN 212
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
V+WN++++ Y Q+G EA+ + MM GL D V+ S SAC L+ G QIH
Sbjct: 213 LVTWNSLITCYEQNGP-ASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIH 271
Query: 183 GVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-------- 233
+K + + +GN L+ Y+KC +A +VF RM RNV+S T+M+S
Sbjct: 272 ARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASV 331
Query: 234 ---------MNR-------------------EDAVSLFKEMRLDGVCPNDVTFIGLIHAI 265
M + E+A+ LF+ ++ + + P TF L+ A
Sbjct: 332 KAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSAC 391
Query: 266 SIGNLVKEGRMIHGLCIKTNF------LSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
+ + GR H +K F S+ V N LI MY + S++D +VF+++ R
Sbjct: 392 ANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKER 451
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTFGSVLNAVGAAEDISLKHGQR 378
+ +SWNA+I GYAQNG A+Q F ++ KP+ T VL A A
Sbjct: 452 DCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHA---------- 501
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA----WTAIISALA 434
G + E + F +E +T ++ L
Sbjct: 502 ---------------------------GLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLG 534
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP-S 493
R G N + M V PD++ + S+L C +G I G+H + +L+ I+P +
Sbjct: 535 RAGCLNEAKNLIEAMP---VNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLE---IDPWN 588
Query: 494 PDHYSCMVDM---LGRVGRLEEAEELVGQ--IPGGPGLSVLQ 530
Y + +M LGR G + +L+ Q + PG S ++
Sbjct: 589 SGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIE 630
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 196/389 (50%), Gaps = 62/389 (15%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G A +F+ + ++V+WN++++ +E+ + +AL +RM G+ D
Sbjct: 189 IDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDE 248
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT ++ +S C GLQ+H+ +VK ++ +GNAL+ MY++ ++ EARRVFD
Sbjct: 249 VTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFD 308
Query: 117 -------------------------------EMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
+M ++ VSWNA+++GYTQ+G+ EA+
Sbjct: 309 RMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGE-NEEALR 367
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY------GTHVSVGNV 199
+ R+ + H +F + SAC + +L LG+Q H +K G+ + + VGN
Sbjct: 368 LFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNS 427
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPN 254
L+ Y KC D ++VF +M +R+ +SW +I + +A+ +F++M + G P+
Sbjct: 428 LIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPD 487
Query: 255 DVTFIGLIHAISIGNLVKEGRMI------HGLC-IKTNFLSEPSVCNCLITMYARFESMQ 307
VT IG++ A S LV+EGR HGL +K ++ C++ + R +
Sbjct: 488 HVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHY-------TCMVDLLGRAGCLN 540
Query: 308 DSEKVFDELSCR-EIISWNALISGYAQNG 335
+++ + + + + + W +L++ +G
Sbjct: 541 EAKNLIEAMPVNPDAVVWGSLLAACKVHG 569
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 187/425 (44%), Gaps = 76/425 (17%)
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
F +C ++ + +H + + + + N L+ Y KC+ DA K+F RM
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 222 DRNVISWTTMISM------------------------------------NREDAVSLFKE 245
RN +W ++IS+ E+++ F +
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
M + N+ +F + A + + G +H L K+ + ++ + + LI MY++ S
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
+ +E+VF + R +++WN+LI+ Y QNG + A++ F ++ +P+ T SV++A
Sbjct: 198 VACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSA 257
Query: 365 VGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFN------- 416
A +LK G + H+ ++K D ++G+AL+DMY K + E++RVF+
Sbjct: 258 --CASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNV 315
Query: 417 --ETQEKSEFA----------------------WTAIISALARHGDYESVMNQFKEMENK 452
ET S +A W A+I+ ++G+ E + F+ ++ +
Sbjct: 316 VSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRE 375
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK---DYHIEPSPDHY--SCMVDMLGRV 507
+ P TF ++L+ C + GR +LK ++ D + + ++DM +
Sbjct: 376 SIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKC 435
Query: 508 GRLEE 512
G +E+
Sbjct: 436 GSIED 440
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 36/301 (11%)
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
PN F L+ + + R++H + T F E + N LI +Y + + + D+ K+
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP------------------- 353
FD + R +WN+LIS ++G L FG + E
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGF-LDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 354 --------------NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
N Y+FGS L+A D+++ G + H+ + K +D +GSAL+
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNM--GTQVHALVSKSRYSTDVYMGSALI 189
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K GS+ ++ VF+ E++ W ++I+ ++G + F M + G+ PD +
Sbjct: 190 DMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEV 249
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
T SV++ C + +G + ++K + +VDM + ++ EA + +
Sbjct: 250 TLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDR 309
Query: 520 I 520
+
Sbjct: 310 M 310
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 21/162 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + +F + D VSWN ++ G+ ++ +AL +M + G D
Sbjct: 429 IDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDH 488
Query: 58 VTYSTALSFC----LDHEG--FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
VT L C L EG + F ++ H LI + Y ++ + R G L EA
Sbjct: 489 VTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPL----KDHY--TCMVDLLGRAGCLNEA 542
Query: 112 RRVFDEMP-NKDSVSWNAILS-----GYTQDGDYGVEAILAL 147
+ + + MP N D+V W ++L+ G + G + E +L +
Sbjct: 543 KNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEI 584
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/641 (34%), Positives = 358/641 (55%), Gaps = 23/641 (3%)
Query: 24 DIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
++VSWN+++SG+ + + ++ + + D T+S ALS C G +H
Sbjct: 5 NVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIH 64
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
+LI GL V + N+LI MY + GR+ AR VF+ DSVSWN++++GY + G
Sbjct: 65 ALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSND 124
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGH--EKNLELGKQIHGVSIKMGYGTHVSVGN 198
E + L++M+R GL L+ + SA ACG ++E GK +HG ++K+G V VG
Sbjct: 125 -EMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGT 183
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-------SMNRE---DAVSLFKEMRL 248
L+ TY+K DA K+F+ M D NV+ + MI +M E +A+ LF EM+
Sbjct: 184 ALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQS 243
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
G+ P++ TF ++ A S + G+ IH K N S+ + N L+ +Y+ S++D
Sbjct: 244 RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIED 303
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGA 367
K F +++SW +LI G+ QNG + F ++ KP+ +T +L+A
Sbjct: 304 GLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSA--C 361
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
A ++K G++ H++ IK G+ + I+ ++ + MY K G I + F ET+ +W+
Sbjct: 362 ANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWS 421
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
+IS+ A+HG + ++ F+ M+ G+ P+ ITFL VL C G++ +G F+ M KD
Sbjct: 422 VMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKD 481
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL-QSLLGACRIHGNVEMGE 546
+ I P+ H +C+VD+LGR GRL EAE + G G V+ +SLL ACR+H + G+
Sbjct: 482 HGITPNVKHSACIVDLLGRAGRLAEAESFIMD-SGFEGDPVMWRSLLSACRVHKATDTGK 540
Query: 547 RIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDID 606
R+A+ ++++EP + SYVL+ N+Y + G +R MK +GV+KE G SW +VG++
Sbjct: 541 RVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNV- 599
Query: 607 GLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIA 647
+H F +GD +HP S+ IY E + E+K L+ E+ ++
Sbjct: 600 -VHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVS 639
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 224/455 (49%), Gaps = 23/455 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MYCK G+ D A +F + + D VSWN++++G+ + +D+ L ++M G+ ++
Sbjct: 83 IDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNS 142
Query: 58 VTYSTALSFCLDH--EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+AL C + G LH VK GLD +V VG AL+ Y++ G L +A ++F
Sbjct: 143 YALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIF 202
Query: 116 DEMPNKDSVSWNAILSGYTQ----DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
MP+ + V +NA+++G+ Q ++ EA+ EM +G++ +F+S AC
Sbjct: 203 KLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACST 262
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+ E GKQIH K + +GN L+ YS D K F +V+SWT++
Sbjct: 263 IEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSL 322
Query: 232 I-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I + E ++LF E+ G P++ T ++ A + VK G IH IKT
Sbjct: 323 IVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGI 382
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ + N I MYA+ + + F E +I+SW+ +IS AQ+G + AV F
Sbjct: 383 GNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVD-LFE 441
Query: 347 VIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV--GSALLDMY 402
++K S PN TF VL V + ++ G R + I+K P V + ++D+
Sbjct: 442 LMKGSGIAPNHITFLGVL--VACSHGGLVEEGLR-YFEIMKKDHGITPNVKHSACIVDLL 498
Query: 403 GKRGSIFESQR-VFNETQEKSEFAWTAIISALARH 436
G+ G + E++ + + E W +++SA H
Sbjct: 499 GRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVH 533
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 190/382 (49%), Gaps = 16/382 (4%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ VSWN+++SGYTQ G Y E + E LRLD +F++A S CG +L L
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYH-EVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRL 59
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+ IH + G G V + N L+ Y KC A VF + + +SW ++I+
Sbjct: 60 GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR 119
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI--SIGNLVKEGRMIHGLCIKTNFLSEP 290
+ ++ + L +M G+ N + A + + ++ G+M+HG +K +
Sbjct: 120 IGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 179
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ-----NGLSLAAVQAFF 345
V L+ YA+ ++D+ K+F + ++ +NA+I+G+ Q + + A+ FF
Sbjct: 180 VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFF 239
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ KP+ +TF S+L A E + + G++ H+ I K L SD +G+AL+++Y
Sbjct: 240 EMQSRGMKPSEFTFSSILKACSTIE--AFECGKQIHAQIFKYNLQSDEFIGNALVELYSL 297
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GSI + + F+ T + +WT++I ++G +E + F E+ G +PD T +
Sbjct: 298 SGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIM 357
Query: 465 LTVCGRNGMIHKGRHLFDSMLK 486
L+ C + G + +K
Sbjct: 358 LSACANLAAVKSGEQIHAYAIK 379
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
+++ +W ++IS + G Y VMN FKE +R D TF + L+VCGR + GR
Sbjct: 3 KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGR- 61
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIH 539
L +++ + + ++DM + GR++ A + +S + G RI
Sbjct: 62 LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIG 121
Query: 540 GNVEM 544
N EM
Sbjct: 122 SNDEM 126
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 347/632 (54%), Gaps = 15/632 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVT 59
MY G +A +F+ + + WN +++ KS D ++ +M GV D+ T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+S G QLH I+K G VGN+L+ Y + R+ AR+VFDEM
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D +SWN+I++GY +G + + ++M+ G+ +D + S + C + + LG+
Sbjct: 258 ERDVISWNSIINGYVSNG-LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNRE- 237
+H + +K + N L+ YSKC A VFR M DR+V+S+T+MI+ RE
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+AV LF+EM +G+ P+ T +++ + L+ EG+ +H + + + V N
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-- 352
L+ MYA+ SMQ++E VF E+ ++IISWN +I GY++N + A+ F +++E +
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ T VL A + + G+ H +I++ G SD V ++L+DMY K G++ +
Sbjct: 497 PDERTVACVLPACASLS--AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F++ K +WT +I+ HG + + F +M G+ D I+F+S+L C +G
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ +G F+ M + IEP+ +HY+C+VDML R G L +A + +P P ++ +L
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L CRIH +V++ E++A+ + ++EP +G YVLM+N+YAE WE V LRK + +G+R
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 734
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
K G SW ++ ++ F +GD+++P +E I
Sbjct: 735 KNPGCSWIEIK--GRVNIFVAGDSSNPETENI 764
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 241/478 (50%), Gaps = 21/478 (4%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T + L C D + G ++ + I G + +G+ L MY+ G L EA RVF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
DE+ + ++ WN +++ + GD+ +I +MM G+ +D +F+ + + +++
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFS-GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G+Q+HG +K G+G SVGN L++ Y K + A KVF M +R+VISW ++I+
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E +S+F +M + G+ + T + + + L+ GR +H + +K F E
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
CN L+ MY++ + ++ VF E+S R ++S+ ++I+GYA+ GL+ AV+ F + +E
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ YT +VLN A L G+R H I + L D V +AL+DMY K GS+
Sbjct: 392 GISPDVYTVTAVLNC--CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK-EMENKGVRPDSITFLSVLTVC 468
E++ VF+E + K +W II +++ ++ F +E K PD T VL C
Sbjct: 450 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 509
Query: 469 GRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
KGR + +++ D H+ S +VDM + G L A L I
Sbjct: 510 ASLSAFDKGREIHGYIMRNGYFSDRHVANS------LVDMYAKCGALLLAHMLFDDIA 561
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 181/364 (49%), Gaps = 9/364 (2%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
+D + S C K+L+ GK++ G+ ++G+ L Y+ C +A++V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 217 FRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F + + W ++ S + ++ LFK+M GV + TF + + S V
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
G +HG +K+ F SV N L+ Y + + + + KVFDE++ R++ISWN++I+GY
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 332 AQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
NGL+ + F ++ + + T SV + ISL G+ HS +K
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISL--GRAVHSIGVKACFSR 329
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
+ + LLDMY K G + ++ VF E ++S ++T++I+ AR G + F+EME
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+G+ PD T +VL C R ++ +G+ + + +K+ + + ++DM + G +
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 511 EEAE 514
+EAE
Sbjct: 449 QEAE 452
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 217/437 (49%), Gaps = 23/437 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G D A +F +++ +VS+ ++++G+ + + +A+ M G+ D
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L+ C + G ++H I + L +++V NAL+ MY++ G + EA VF E
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 457
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL--DHVSFTSAASACGHEKNL 175
M KD +SWN I+ GY+++ Y EA L+L ++ + R D + AC
Sbjct: 458 MRVKDIISWNTIIGGYSKNC-YANEA-LSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
+ G++IHG ++ GY + V N L+ Y+KC A+ +F + ++++SWT MI+
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 575
Query: 234 -MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
M+ ++A++LF +MR G+ ++++F+ L++A S LV EG + ++ EP
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNI-MRHECKIEP 634
Query: 291 SVCN--CLITMYARFESMQDSEKVFDELSC-REIISWNALISG-YAQNGLSLAAVQAFFG 346
+V + C++ M AR + + + + + + W AL+ G + + LA A
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
E + Y VL A AE + +R I + GL +P G + +++ G R
Sbjct: 695 FELEPENTGYY---VLMANIYAEAEKWEQVKRLRKRIGQRGLRKNP--GCSWIEIKG-RV 748
Query: 407 SIFESQRVFNETQEKSE 423
+IF + N E E
Sbjct: 749 NIFVAGDSSNPETENIE 765
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 329 SGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
SG +N + L V + + + T SVL A+ SLK G+ + I G
Sbjct: 74 SGNLENAVKLLCVSGKWDI------DPRTLCSVLQL--CADSKSLKDGKEVDNFIRGNGF 125
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
D +GS L MY G + E+ RVF+E + + W +++ LA+ GD+ + FK+
Sbjct: 126 VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKK 185
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
M + GV DS TF V +H G L +LK
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/568 (36%), Positives = 321/568 (56%), Gaps = 12/568 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G QLH+L++ G ++ N L+ MYS+ G L A ++FD MP ++ VSW A++SG +Q
Sbjct: 24 GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+ + EAI M G +F+SA AC ++E+GKQ+H +++K G G+ +
Sbjct: 84 NSKFS-EAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDG 250
VG+ L YSKC DA KVF M ++ +SWT MI E+A+ FK+M +
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEE 202
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V + + A K GR +H +K F S+ V N L MY++ M+ +
Sbjct: 203 VTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESAS 262
Query: 311 KVFD-ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
VF + CR ++S+ LI GY + + F + ++ +PN +TF S++ A A
Sbjct: 263 NVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKA--CA 320
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+L+ G + H+ ++K+ D DP V S L+DMYGK G + + + F+E + +E AW +
Sbjct: 321 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNS 380
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
++S +HG + + F+ M ++GV+P++ITF+S+LT C G++ +G F SM K Y
Sbjct: 381 LVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTY 440
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
+ P +HYSC++D+LGR GRL+EA+E + ++P P S LGACRIHG+ EMG+
Sbjct: 441 GVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLA 500
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL 608
A+ L+K+EP SG+ VL+SN+YA + WE V +R M+ V+K G+SW DVG
Sbjct: 501 AEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVG--YKT 558
Query: 609 HGFSSGDNTHPRSEEIYRMAECLGSEMK 636
H F + D +H R IY + L ++K
Sbjct: 559 HVFGAEDWSHXRKSAIYEKLDXLLDQIK 586
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 246/464 (53%), Gaps = 39/464 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFD 56
+NMY K G+ D AL +F+ + ++VSW ++SG + + S A+R M + G V
Sbjct: 47 VNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ-NSKFSEAIRTFCGMRICGEVPT 105
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+S+A+ C G Q+H L +KFG+ SE++VG+ L MYS+ G + +A +VF+
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE 165
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
EMP KD VSW A++ GY++ G++ EA+LA +M+ + + +D S ACG K +
Sbjct: 166 EMPCKDEVSWTAMIDGYSKIGEFE-EALLAFKKMIDEEVTIDQHVLCSTLGACGALKACK 224
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMI--- 232
G+ +H +K+G+ + + VGN L YSK A+ VF + RNV+S+T +I
Sbjct: 225 FGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGY 284
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ E +S+F E+R G+ PN+ TF LI A + +++G +H +K NF +P
Sbjct: 285 VETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDP 344
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + L+ MY + ++ + + FDE+ I+WN+L+S + Q+GL A++ F ++
Sbjct: 345 FVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDR 404
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS----DPIVG--------SA 397
KPNA TF S+L H+ +++ GLD D G S
Sbjct: 405 GVKPNAITFISLLTGCS-------------HAGLVEEGLDYFYSMDKTYGVVPGEEHYSC 451
Query: 398 LLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
++D+ G+ G + E++ N E + F W + + A HGD E
Sbjct: 452 VIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 207/412 (50%), Gaps = 20/412 (4%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M+R L HV T A + K L GKQ+H + I GY + N L++ YSKC
Sbjct: 1 MLRDTNALAHVIQTYAKT-----KRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGE 55
Query: 210 TGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
A K+F M RN++SWT MIS +A+ F MR+ G P F I A
Sbjct: 56 LDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRA 115
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+ ++ G+ +H L +K SE V + L MY++ +M D+ KVF+E+ C++ +SW
Sbjct: 116 CASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSW 175
Query: 325 NALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
A+I GY++ G A+ AF +I +E + + S L A GA + + K G+ HS +
Sbjct: 176 TAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALK--ACKFGRSVHSSV 233
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN-ETQEKSEFAWTAIISALARHGDYESV 442
+K+G +SD VG+AL DMY K G + + VF +++ ++ ++T +I E
Sbjct: 234 VKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKG 293
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
++ F E+ +G+ P+ TF S++ C + +G L ++K + + P S +VD
Sbjct: 294 LSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK-INFDEDPFVSSILVD 352
Query: 503 MLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG----NVEMGERIAD 550
M G+ G LE A + +I G P SL+ HG ++ ER+ D
Sbjct: 353 MYGKCGLLEHAIQAFDEI-GDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVD 403
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/573 (36%), Positives = 322/573 (56%), Gaps = 15/573 (2%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T S+ L C + GL LH+ ++K G S+V++ N ++ MY++ G AR+VFDEM
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K+ VSW+A++SGY Q G E +A+ + L + F S SAC + LG
Sbjct: 65 FEKNLVSWSAMISGYDQAG----EPQMAIDLYSQMFLVPNEYVFASVISACASLSAVTLG 120
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----- 233
++IH S+K GY + V N L+S Y KC DA VF + N +S+ +I+
Sbjct: 121 QKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVEN 180
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E + FK MR G+ P+ F+G++ + +K G +H +K N S P +
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-- 351
N +ITMY+ +Q++EK F + +++ISWN LI+ + ++ F + +E+
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ +TF S L A S+ HG++ H+H+++ L D VG+AL++MY K G I +
Sbjct: 301 RPDDFTFTSALAACAGLA--SMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYA 358
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+F++ + +W II+ HG E + F++M G+RPDS+TF+ +LT C
Sbjct: 359 YDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHA 418
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ KG+ F+SM + Y I P +H+SC++DMLGR GRL EAEE + + P VL S
Sbjct: 419 GLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVS 478
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL A R+HG+V +GER+A L+K++P + YVL+SNLYA G W+ VA RK +K G+
Sbjct: 479 LLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGL 538
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
+KE G S +V + F+ GD TH R +EI
Sbjct: 539 KKEPGHSLIEVN--GSVEKFTIGDFTHLRIKEI 569
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 232/453 (51%), Gaps = 24/453 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
+NMY K G A +F+ + ++VSW+ ++SG++++ + + + +V + +
Sbjct: 45 LNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVF 104
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
++ +S C G ++HS +KFG +S +V N+LI+MY + + +A VF P
Sbjct: 105 ASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPE 164
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGK 179
+ VS+NA+++G+ ++ +E L ++MR +GL D +F C +NL+ G
Sbjct: 165 PNCVSYNALITGFVENQQ--LERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGA 222
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM----- 234
++H ++K+ + +GNV+++ YS+ + +A K FR + +++VISW T+I+
Sbjct: 223 ELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCD 282
Query: 235 NREDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ + +FK M + V P+D TF + A + + G+ IH ++T + V
Sbjct: 283 DHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVG 342
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N L+ MYA+ + + +F ++ ++SWN +I+G+ +GL AV+ F + +
Sbjct: 343 NALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIR 402
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFES 411
P++ TF +L A A + GQ + + + G+ D S L+DM G+ G + E+
Sbjct: 403 PDSVTFIGLLTACNHAGLVD--KGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEA 460
Query: 412 QRVFNETQEKSEFAW------TAIISALARHGD 438
+ E K F W +++SA HGD
Sbjct: 461 E----EYMRKFPF-WNDPVVLVSLLSASRLHGD 488
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/573 (36%), Positives = 322/573 (56%), Gaps = 15/573 (2%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T S+ L C + GL LH+ ++K G S+V++ N ++ MY++ G AR+VFDEM
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K+ VSW+A++SGY Q G E +A+ + L + F S SAC + LG
Sbjct: 65 FEKNLVSWSAMISGYDQAG----EPQMAIDLYSQMFLVPNEYVFASVISACASLSAVTLG 120
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----- 233
++IH S+K GY + V N L+S Y KC DA VF + N +S+ +I+
Sbjct: 121 QKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVEN 180
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E + FK MR G+ P+ F+G++ + +K G +H +K N S P +
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-- 351
N +ITMY+ +Q++EK F + +++ISWN LI+ + ++ F + +E+
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ +TF S L A S+ HG++ H+H+++ L D VG+AL++MY K G I +
Sbjct: 301 RPDDFTFTSALAACAGLA--SMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYA 358
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+F++ + +W II+ HG E + F++M G+RPDS+TF+ +LT C
Sbjct: 359 YDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHA 418
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ KG+ F+SM + Y I P +H+SC++DMLGR GRL EAEE + + P VL S
Sbjct: 419 GLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVS 478
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL A R+HG+V +GER+A L+K++P + YVL+SNLYA G W+ VA RK +K G+
Sbjct: 479 LLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGL 538
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
+KE G S +V + F+ GD TH R +EI
Sbjct: 539 KKEPGHSLIEVN--GSVEKFTIGDFTHLRIKEI 569
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 232/453 (51%), Gaps = 24/453 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
+NMY K G A +F+ + ++VSW+ ++SG++++ + + + +V + +
Sbjct: 45 LNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVF 104
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
++ +S C G ++HS +KFG +S +V N+LI+MY + + +A VF P
Sbjct: 105 ASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPE 164
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGK 179
+ VS+NA+++G+ ++ +E L ++MR +GL D +F C +NL+ G
Sbjct: 165 PNCVSYNALITGFVENQQ--LERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGA 222
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM----- 234
++H ++K+ + +GNV+++ YS+ + +A K FR + +++VISW T+I+
Sbjct: 223 ELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCD 282
Query: 235 NREDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ + +FK M + V P+D TF + A + + G+ IH ++T + V
Sbjct: 283 DHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVG 342
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N L+ MYA+ + + +F ++ ++SWN +I+G+ +GL AV+ F + +
Sbjct: 343 NALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIR 402
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFES 411
P++ TF +L A A + GQ + + + G+ D S L+DM G+ G + E+
Sbjct: 403 PDSVTFIGLLTACNHAGLVD--KGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEA 460
Query: 412 QRVFNETQEKSEFAW------TAIISALARHGD 438
+ E K F W +++SA HGD
Sbjct: 461 E----EYMRKFPF-WNDPVVLVSLLSASRLHGD 488
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/673 (34%), Positives = 353/673 (52%), Gaps = 43/673 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSF--ALRM-NLIGVV 54
+NMY K G +F+ + + D VSWN+ ++ FEK + AL A++M N+
Sbjct: 135 VNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSS 194
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
F V+ + A S G G QLH ++ G D + + NAL+ MY++ GR+ +++ +
Sbjct: 195 FTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKAL 253
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F+ ++D VSWN ++S ++Q + EA+ M+ +G+ LD V+ S AC H +
Sbjct: 254 FESFVDRDMVSWNTMISSFSQSDRFS-EALAFFRLMVLEGVELDGVTIASVLPACSHLER 312
Query: 175 LELGKQIHGVSIKMGYGTHVS-VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L++GK+IH ++ S VG+ L+ Y C +VF + R + W MIS
Sbjct: 313 LDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMIS 372
Query: 234 MNR-----EDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
E A+ LF EM ++ G+ PN T ++ A IHG +K F
Sbjct: 373 GYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFK 432
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ V N L+ MY+R M SE +FD + R+ +SWN +I+GY +G A+ +
Sbjct: 433 EDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEM 492
Query: 348 IK------------------ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
+ KPNA T +VL G A ++ G+ H++ I+ L
Sbjct: 493 QRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLP--GCAALAAIAKGKEIHAYAIRNMLA 550
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
SD VGSAL+DMY K G + S+RVFNE K+ W +I A HG E + FK M
Sbjct: 551 SDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNM 610
Query: 450 ENKGVR-----PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDML 504
+ R P+ +TF++V C +G+I +G +LF M D+ +EP+ DHY+C+VD+L
Sbjct: 611 VAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLL 670
Query: 505 GRVGRLEEAEELVGQIPGG-PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSY 563
GR G+LEEA ELV +P + SLLGACRIH NVE+GE A L+ +EP + Y
Sbjct: 671 GRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHY 730
Query: 564 VLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEE 623
VL+SN+Y+ G W +RK M+ GV+KE G SW + D +H F +GD +HP+SE+
Sbjct: 731 VLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFR--DEVHKFMAGDVSHPQSEQ 788
Query: 624 IYRMAECLGSEMK 636
++ E L +M+
Sbjct: 789 LHGFLETLSEKMR 801
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 159/549 (28%), Positives = 264/549 (48%), Gaps = 38/549 (6%)
Query: 27 SWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLI 83
SW L +S+D A+S + M + G D + L + G Q+H+
Sbjct: 59 SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAA 118
Query: 84 VKFGL-DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVE 142
VKFG S V V N L+ MY + G + + +VFD + ++D VSWN+ ++ + + +
Sbjct: 119 VKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWE-Q 177
Query: 143 AILALIEMMRKGLRLDHVSFTSAASAC---GHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
A+ A M + + L + S A AC G L LGKQ+HG S+++G N
Sbjct: 178 ALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNA 236
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPN 254
LM+ Y+K D+ +F DR+++SW TMIS + +A++ F+ M L+GV +
Sbjct: 237 LMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELD 296
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS-VCNCLITMYARFESMQDSEKVF 313
VT ++ A S + G+ IH ++ N L E S V + L+ MY ++ +VF
Sbjct: 297 GVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVF 356
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDI 371
D + R I WNA+ISGYA+NGL A+ F +IK + PN T SV+ A E
Sbjct: 357 DHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAF 416
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
S K + H + +K+G D V +AL+DMY + G + S+ +F+ + + +W +I+
Sbjct: 417 SNK--ESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMIT 474
Query: 432 ALARHGDYES---VMNQFKEMENKGV--------------RPDSITFLSVLTVCGRNGMI 474
G Y + ++++ + MEN +P++IT ++VL C I
Sbjct: 475 GYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAI 534
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
KG+ + +++ + S +VDM + G L + + ++P + L+
Sbjct: 535 AKGKEIHAYAIRNM-LASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIM 592
Query: 535 ACRIHGNVE 543
AC +HG E
Sbjct: 593 ACGMHGKGE 601
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 214/417 (51%), Gaps = 31/417 (7%)
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P++ + SW L T+ D+ EAI IEM G R D+ +F + A ++L+ G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFR-EAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111
Query: 179 KQIHGVSIKMGYG-THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
+QIH ++K GYG + V+V N L++ Y KC GD KVF R+ DR+ +SW + I+
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR 171
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL-----VKEGRMIHGLCIKTNFL 287
E A+ F+ M+++ + + T + + A++ NL ++ G+ +HG ++
Sbjct: 172 FEKWEQALEAFRAMQMENMELSSFTLVSV--ALACSNLGVMHGLRLGKQLHGYSLRVGD- 228
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG- 346
+ N L+ MYA+ + DS+ +F+ R+++SWN +IS ++Q+ + AFF
Sbjct: 229 QKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSD-RFSEALAFFRL 287
Query: 347 -VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGK 404
V++ + + T SVL A E + + G+ H+++++ L + VGSAL+DMY
Sbjct: 288 MVLEGVELDGVTIASVLPACSHLERLDV--GKEIHAYVLRNNDLIENSFVGSALVDMYCN 345
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLS 463
+ +RVF+ + W A+IS AR+G E + F EM + G+ P++ T S
Sbjct: 346 CRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMAS 405
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEP--SPDHY--SCMVDMLGRVGRLEEAEEL 516
V+ C +H + Y ++ D Y + ++DM R+G+++ +E +
Sbjct: 406 VMPAC-----VHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETI 457
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 6/152 (3%)
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
+ +S +W + + R D+ ++ + EM G RPD+ F +VL + G
Sbjct: 52 SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
+ + +K + S + +V+M G+ G + + ++ +I +S + CR
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR 171
Query: 538 IHGNVEMGERIADAL--MKMEPAGSGSYVLMS 567
E E+ +A M+ME S+ L+S
Sbjct: 172 F----EKWEQALEAFRAMQMENMELSSFTLVS 199
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/645 (33%), Positives = 362/645 (56%), Gaps = 19/645 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDAVT 59
+Y K G+ DKA +F+ L V+W +++G+ KS + NL+ V+ D
Sbjct: 186 LYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYV 245
Query: 60 YSTALSFCLDHEGFLFG-LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
S+ L+ C G+L G Q+H+ +++ +V N LI Y++ GR+ + +FD +
Sbjct: 246 LSSILNAC-SVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRL 304
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K+ +SW +++GY Q+ Y EA+ + EM R G + D + +S ++CG L+ G
Sbjct: 305 DVKNIISWTTMIAGYMQNS-YDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHG 363
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNRE 237
+QIH IK+ V N L+ YSKC DA +VF + +V+ + MI +R+
Sbjct: 364 RQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQ 423
Query: 238 D----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
A+ +F+EMRL V P+ +TF+ L+ + ++ + IHGL IK F +
Sbjct: 424 GYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTS 483
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESK 352
+ LI +Y++ ++D+ VF+ + ++I+ WN+L SGY S A + + + + +
Sbjct: 484 SALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRER 543
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN +TF ++ A A+ SL HGQ+ H+ ++K+GL+SDP + +AL+DMY K GS+ E++
Sbjct: 544 PNEFTFAALTTA--ASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAE 601
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
++F+ + K W ++IS A+HG E + F+ M + + P+ +TF+SVL+ C G
Sbjct: 602 KIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVG 661
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+ G ++SM + Y IEP +HY+ +V +LGR GRL EA E + ++ P V +SL
Sbjct: 662 FVEDGLQHYNSMAR-YGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSL 720
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L ACR+ GNVE+ + A+ + ++P SGSYV++SN++A KG W V LR M GV
Sbjct: 721 LSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVV 780
Query: 593 KEVGFSWADV-GDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
KE G SW +V G++ H F S D H ++ IY + L ++MK
Sbjct: 781 KEPGQSWIEVNGEV---HIFVSRDKVHDETDLIYLALDELTTQMK 822
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 160/563 (28%), Positives = 278/563 (49%), Gaps = 15/563 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGV-VFD 56
++ Y K G A +F+ + N ++VSW++V+S + + ++ AL + L V +
Sbjct: 82 LHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLN 141
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ + C+ +G G Q+HS ++K G +VYVG +L+ +Y++ G + +AR VFD
Sbjct: 142 EYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFD 201
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ K V+W AI++GYT+ G V L + MM + D +S +AC L+
Sbjct: 202 GLVLKTPVTWTAIITGYTKSGRSEVSLQLFNL-MMESNVIPDKYVLSSILNACSVLGYLK 260
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GKQIH ++ VS NVL+ Y+KC +F R+ +N+ISWTTMI+
Sbjct: 261 GGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYM 320
Query: 234 MNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N D AV L EM G P++ ++ + + ++ GR IH IK +
Sbjct: 321 QNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNF 380
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
V N LI MY++ ++ D+++VFD ++C ++ +NA+I GY++ G A++ F + +K
Sbjct: 381 VTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKH 440
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ TF V +A + L+ ++ H IIK G D SAL+D+Y K I +
Sbjct: 441 VSPSFLTF--VSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRD 498
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF T K W ++ S E + +++ RP+ TF ++ T
Sbjct: 499 ARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASI 558
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+ G+ + ++K +E P + +VDM + G +EEAE++ +
Sbjct: 559 LASLPHGQQFHNQVMK-MGLESDPFITNALVDMYAKCGSVEEAEKIFSS-SVWKDTACWN 616
Query: 531 SLLGACRIHGNVEMGERIADALM 553
S++ HG VE R+ + ++
Sbjct: 617 SMISMYAQHGKVEEALRMFETMV 639
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 213/402 (52%), Gaps = 10/402 (2%)
Query: 68 LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN 127
+ ++ L+ ++H +V +GL +V++ N L+ Y + G + +A +FD+MPN++ VSW+
Sbjct: 51 VSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWS 110
Query: 128 AILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLELGKQIHGVSI 186
+++S YTQ G Y +A+L +E R + +L+ S AC E G Q+H I
Sbjct: 111 SVVSMYTQLG-YNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVI 169
Query: 187 KMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVS 241
K G+G V VG L+ Y+K A VF + + ++WT +I S E ++
Sbjct: 170 KSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQ 229
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
LF M V P+ +++A S+ +K G+ IH +++ + S N LI Y
Sbjct: 230 LFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYT 289
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
+ ++ + +FD L + IISW +I+GY QN AV+ + + KP+ Y S
Sbjct: 290 KCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSS 349
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
VL + G+ + +L+HG++ HS++IKV L+ D V +AL+DMY K ++ +++RVF+
Sbjct: 350 VLTSCGSVD--ALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTC 407
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
S + A+I +R G + F+EM K V P +TF+
Sbjct: 408 HSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFV 449
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 214/645 (33%), Positives = 357/645 (55%), Gaps = 16/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++M+ ++A +F+++N DI+SWN ++S + ++L M + ++
Sbjct: 339 ISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNS 398
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ LS C + +G +H L+VK GLDS V + N L+T+YS GR +A VF
Sbjct: 399 TTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQA 458
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D +SWN++++ Y QDG ++ + L E+++ G ++HV+F SA +AC + + L
Sbjct: 459 MTERDLISWNSMMACYVQDGKC-LDGLKILAELLQMGKVMNHVTFASALAACSNPECLIE 517
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
K +H + I G+ + VGN L++ Y K + +A KV + M + ++W +I + E
Sbjct: 518 SKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAE 577
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN-LVKEGRMIHGLCIKTNFLSEPS 291
+AV +K +R G+ N +T + ++ A S + L+K G IH + T F S+
Sbjct: 578 NEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDY 637
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LITMYA+ + S +FD L + I+WNA+++ A +G A++ FG ++
Sbjct: 638 VKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALK-IFGEMRNV 696
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
N F A L+ GQ+ H +IK+G +SD V +A +DMYGK G + +
Sbjct: 697 GVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDV 756
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
++ + +S +W +ISA ARHG ++ F EM G +PD +TF+S+L+ C
Sbjct: 757 LKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHG 816
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G +DSM +++ + P +H C++D+LGR GRL AE + ++P P +S
Sbjct: 817 GLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRS 876
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACRIHGN+E+ + A+ L++++P+ +YVL SN+ A G WE V LRK M S +
Sbjct: 877 LLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNI 936
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K+ SW + D +H F G+ HP++ R++ LG MK
Sbjct: 937 KKQPACSWVKLK--DKVHSFGMGEKYHPQAS---RISAKLGELMK 976
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 254/480 (52%), Gaps = 17/480 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMY K G + A +F+ + + + SW+T+LSG+ + ++A+ +M +GV +
Sbjct: 136 INMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNG 195
Query: 58 VTYSTALSFCLDHEGFLF--GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ ++ C G++ G Q+H +VK G+ +VYVG AL+ Y G + A+++F
Sbjct: 196 FMVASLITAC-SRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLF 254
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+EMP+ + VSW +++ GY+ G+ G E + M ++G+ + +F + S+CG ++
Sbjct: 255 EEMPDHNVVSWTSLMVGYSDSGNPG-EVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQ 313
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
LG Q+ G I+ G+ VSV N L+S +S +A VF M++ ++ISW MIS
Sbjct: 314 VLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAY 373
Query: 234 ----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ RE ++ F MR N T L+ S + +K GR IHGL +K S
Sbjct: 374 AHHGLCRE-SLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSN 432
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+CN L+T+Y+ +D+E VF ++ R++ISWN++++ Y Q+G L ++ +++
Sbjct: 433 VCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQ 492
Query: 350 ESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
K N TF S L A E L + H+ II G IVG+AL+ MYGK G +
Sbjct: 493 MGKVMNHVTFASALAACSNPE--CLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMM 550
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E+++V + W A+I A + + + +K + KG+ + IT +SVL C
Sbjct: 551 MEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGAC 610
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 249/502 (49%), Gaps = 22/502 (4%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G LH+ + ++ ++ N LI MYS++G + AR VFDEM +++ SW+ +LSGY +
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL-ELGKQIHGVSIKMGYGTHV 194
G Y EA+ +M G+ + S +AC + + G Q+HG +K G V
Sbjct: 173 VGLYE-EAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDV 231
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLD 249
VG L+ Y + +A K+F M D NV+SWT+++ S N + +++++ MR +
Sbjct: 232 YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQE 291
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
GV N TF + + + G + G I+ F SV N LI+M++ F S++++
Sbjct: 292 GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 351
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAE 369
VFD ++ +IISWNA+IS YA +GL +++ F + T S L +V ++
Sbjct: 352 CYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSV 411
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
D +LK G+ H ++K+GLDS+ + + LL +Y + G +++ VF E+ +W ++
Sbjct: 412 D-NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 470
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML---- 485
++ + G + E+ G + +TF S L C + + + + ++
Sbjct: 471 MACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGF 530
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG-NVEM 544
D+ I + +V M G++G + EA++++ +P P +L+G H N E
Sbjct: 531 HDFLIVGNA-----LVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG---HAENEEP 581
Query: 545 GERIADALMKMEPAGSGSYVLM 566
E + + E +Y+ M
Sbjct: 582 NEAVKAYKLIREKGIPANYITM 603
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
Query: 362 LNAV-----GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
LNAV G +E S G+ H+ I ++ + L++MY K G+I ++ VF+
Sbjct: 94 LNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFD 153
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG-MIH 475
E + ++E +W+ ++S R G YE + F +M GV P+ S++T C R+G M
Sbjct: 154 EMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMAD 213
Query: 476 KGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
+G + ++K + D Y + +V G +G + A++L ++P
Sbjct: 214 EGFQVHGFVVKTGIL---GDVYVGTALVHFYGSIGLVYNAQKLFEEMP 258
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 198/596 (33%), Positives = 344/596 (57%), Gaps = 25/596 (4%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRV 114
D T AL C + +G +H + K L S++YVG++LI MY + GR+ EA R+
Sbjct: 40 DNFTLPVALKACGELREVKYGEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRM 99
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-----GLRLDHVSFTSAASAC 169
F+E+ D V+W++++SG+ ++G + +E R+ + D V+ + SAC
Sbjct: 100 FNELEKPDIVTWSSMVSGFEKNG-----SPYQAVEFFRRMATASDVTPDRVTLITLVSAC 154
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
N LG+ +HG ++ G+ +S+ N L++ Y+K +A +F+ M +++VISW+
Sbjct: 155 TKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWS 214
Query: 230 TMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
T+I+ + +A+ +F EM DG PN T + ++ A + N +++GR H L I+
Sbjct: 215 TVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRK 274
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
+E V L+ MY + S +++ VF + ++++SW ALISG+ NG++ +++ F
Sbjct: 275 GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEF 334
Query: 345 FGVIKE--SKPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
++ E ++P+A +L +G+ ++ LK + HS++IK G DS+P +G++L+++
Sbjct: 335 SIMLLENNTRPDAIL---MLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVEL 391
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSIT 460
Y + GS+ + +VFNE K WT++I+ HG + F M + V+P+ +T
Sbjct: 392 YSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVT 451
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
FLS+L+ C G+IH+G +F+ M+ DY + P+ +HY+ +VD+LGRVG L+ A E+ ++
Sbjct: 452 FLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEITKRM 511
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVA 580
P P +L +LLGACRIH N EM E +A L ++E +G Y+LMSN+Y KG+WE V
Sbjct: 512 PFSPTPQILGTLLGACRIHQNGEMAETVAKQLFELESNHAGYYMLMSNMYGVKGEWENVE 571
Query: 581 ILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
LR +K +G++K + S ++ +H F + D+ HP E +Y + + L MK
Sbjct: 572 KLRNSVKQRGIKKGLAESLIEIR--RKVHKFVADDDLHPEKEPVYGLLKELDLHMK 625
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 197/378 (52%), Gaps = 13/378 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIG-VVFDAV 58
MY K G+ +AL +FN L PDIV+W++++SGFEK+ A+ F RM V D V
Sbjct: 86 MYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRV 145
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T T +S C G +H +++ G +++ + N+L+ Y++ EA +F M
Sbjct: 146 TLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMM 205
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
KD +SW+ +++ Y Q+G EA+ EM+ G + + AC +LE G
Sbjct: 206 AEKDVISWSTVIACYVQNGA-AAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQG 264
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MN 235
++ H ++I+ G T V V L+ Y KC +A VF R+ ++V+SW +IS +N
Sbjct: 265 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLN 324
Query: 236 --REDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++ F M L+ P+ + + ++ + S +K+ H IK F S P +
Sbjct: 325 GMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFI 384
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK--E 350
L+ +Y+R S+ ++ KVF+E++ ++ + W +LI+GY +G A++ F +++ E
Sbjct: 385 GASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSE 444
Query: 351 SKPNAYTFGSVLNAVGAA 368
KPN TF S+L+A A
Sbjct: 445 VKPNEVTFLSILSACSHA 462
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 144/292 (49%), Gaps = 11/292 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRM--NLI--GVVFD 56
+N Y KS F +A+ +F + D++SW+TV++ + + + A + ALR+ +I G +
Sbjct: 186 LNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQ-NGAAAEALRVFNEMIDDGTEPN 244
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T L C G + H L ++ GL++EV V AL+ MY + EA VF
Sbjct: 245 VATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFS 304
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+P KD VSW A++SG+T +G I ++ R D + +C L+
Sbjct: 305 RIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLK 364
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
+ H IK G+ ++ +G L+ YS+C G+A+KVF + ++ + WT++I+
Sbjct: 365 QAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYG 424
Query: 234 --MNREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
A+ F M R V PN+VTF+ ++ A S L+ EG I L +
Sbjct: 425 IHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMV 476
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 148/310 (47%), Gaps = 11/310 (3%)
Query: 220 MHDRNVISWTTMI-SMNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
M R + W T++ S++R E + F +M D P++ T + A VK G
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 275 RMIHGLCIKTNFL-SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
MIHG K L S+ V + LI MY + M ++ ++F+EL +I++W++++SG+ +
Sbjct: 61 EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120
Query: 334 NGLSLAAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
NG AV+ F + P+ T ++++A + L G+ H +++ G +D
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRL--GRCVHGFVMRRGFSND 178
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+ ++LL+ Y K + E+ +F EK +W+ +I+ ++G + F EM +
Sbjct: 179 LSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMID 238
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
G P+ T L VL C + +GR + ++ +E + +VDM + E
Sbjct: 239 DGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPE 297
Query: 512 EAEELVGQIP 521
EA + +IP
Sbjct: 298 EAYAVFSRIP 307
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
+++ + W ++ +L+R +E VM F +M +PD+ T L CG + G
Sbjct: 3 KRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEM 62
Query: 480 LFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
+ + K+ + D Y S ++ M + GR+ EA + ++ P + S++
Sbjct: 63 IHGFLKKN--VTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELE-KPDIVTWSSMVSGFE 119
Query: 538 IHGN----VEMGERIADA 551
+G+ VE R+A A
Sbjct: 120 KNGSPYQAVEFFRRMATA 137
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 214/645 (33%), Positives = 357/645 (55%), Gaps = 16/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++M+ ++A +F+++N DI+SWN ++S + ++L M + ++
Sbjct: 989 ISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNS 1048
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ LS C + +G +H L+VK GLDS V + N L+T+YS GR +A VF
Sbjct: 1049 TTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQA 1108
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D +SWN++++ Y QDG ++ + L E+++ G ++HV+F SA +AC + + L
Sbjct: 1109 MTERDLISWNSMMACYVQDGKC-LDGLKILAELLQMGKVMNHVTFASALAACSNPECLIE 1167
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
K +H + I G+ + VGN L++ Y K + +A KV + M + ++W +I + E
Sbjct: 1168 SKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAE 1227
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISI-GNLVKEGRMIHGLCIKTNFLSEPS 291
+AV +K +R G+ N +T + ++ A S +L+K G IH + T F S+
Sbjct: 1228 NEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDY 1287
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LITMYA+ + S +FD L + I+WNA+++ A +G A++ FG ++
Sbjct: 1288 VKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALK-IFGEMRNV 1346
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
N F A L+ GQ+ H +IK+G +SD V +A +DMYGK G + +
Sbjct: 1347 GVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDV 1406
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
++ + +S +W +ISA ARHG ++ F EM G +PD +TF+S+L+ C
Sbjct: 1407 LKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHG 1466
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G +DSM +++ + P +H C++D+LGR GRL AE + ++P P +S
Sbjct: 1467 GLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRS 1526
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACRIHGN+E+ + A+ L++++P+ +YVL SN+ A G WE V LRK M S +
Sbjct: 1527 LLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNI 1586
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K+ SW + D +H F G+ HP++ R++ LG MK
Sbjct: 1587 KKQPACSWVKLK--DKVHSFGMGEKYHPQAS---RISAKLGELMK 1626
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 299/552 (54%), Gaps = 10/552 (1%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D Y L C+D + G +H+ ++ G S++++ LI Y + G ++ AR V
Sbjct: 28 LDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNV 87
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD MP + VSW A++SGY+Q+G + +A + +M G++ + ++ SA AC +
Sbjct: 88 FDGMPERSVVSWTAMVSGYSQNGRFE-KAFVLFSDMRHCGVKANQFTYGSALRACTSLRC 146
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L++G Q+ G K + ++ V + L+ +SKC DA+ +F M +R+V+SW MI
Sbjct: 147 LDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGG 206
Query: 235 NR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+D+ +F+ M G+ P+ T ++ A + G + IHG+ + + S
Sbjct: 207 YAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSY 266
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V LI YA+ S++ ++ + + +++ S ALI+GYA G+ F +
Sbjct: 267 DIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMN 326
Query: 350 ESKP--NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ + S+LN +L G + H+ +K D +G+AL+DMY K G
Sbjct: 327 QMNIGMDDVILCSMLNICANLASFAL--GTQIHAFALKYQPSYDVAMGNALIDMYAKSGE 384
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I +++R F+E +EK+ +WT++IS A+HG ++ +K+ME+KG +P+ +TFLS+L
Sbjct: 385 IEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFA 444
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G+ +G F++M+ Y+I+P +HYSCMVD+ R G LEEA L+ +I S
Sbjct: 445 CSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNAS 504
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+ ++LGA I+G + +G+ A L M+P S +YV+++++Y+ G W+ +RK M+
Sbjct: 505 LWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLME 564
Query: 588 SKGVRKEVGFSW 599
+ +K G+S+
Sbjct: 565 ERSTKKNAGYSF 576
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 254/480 (52%), Gaps = 17/480 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMY K G + A +F+ + + + SW+T+LSG+ + ++A+ +M +GV +
Sbjct: 786 INMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNG 845
Query: 58 VTYSTALSFCLDHEGFLF--GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ ++ C G++ G Q+H +VK G+ +VYVG AL+ Y G + A+++F
Sbjct: 846 FMVASLITAC-SRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLF 904
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+EMP+ + VSW +++ GY+ G+ G E + M ++G+ + +F + S+CG ++
Sbjct: 905 EEMPDHNVVSWTSLMVGYSDSGNPG-EVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQ 963
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
LG Q+ G I+ G+ VSV N L+S +S +A VF M++ ++ISW MIS
Sbjct: 964 VLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAY 1023
Query: 234 ----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ RE ++ F MR N T L+ S + +K GR IHGL +K S
Sbjct: 1024 AHHGLCRE-SLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSN 1082
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+CN L+T+Y+ +D+E VF ++ R++ISWN++++ Y Q+G L ++ +++
Sbjct: 1083 VCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQ 1142
Query: 350 ESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
K N TF S L A E L + H+ II G IVG+AL+ MYGK G +
Sbjct: 1143 MGKVMNHVTFASALAACSNPE--CLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMM 1200
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E+++V + W A+I A + + + +K + KG+ + IT +SVL C
Sbjct: 1201 MEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGAC 1260
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 249/502 (49%), Gaps = 22/502 (4%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G LH+ + ++ ++ N LI MYS++G + AR VFDEM +++ SW+ +LSGY +
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL-ELGKQIHGVSIKMGYGTHV 194
G Y EA+ +M G+ + S +AC + + G Q+HG +K G V
Sbjct: 823 VGLYE-EAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDV 881
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLD 249
VG L+ Y + +A K+F M D NV+SWT+++ S N + +++++ MR +
Sbjct: 882 YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQE 941
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
GV N TF + + + G + G I+ F SV N LI+M++ F S++++
Sbjct: 942 GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 1001
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAE 369
VFD ++ +IISWNA+IS YA +GL +++ F + T S L +V ++
Sbjct: 1002 CYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSV 1061
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
D +LK G+ H ++K+GLDS+ + + LL +Y + G +++ VF E+ +W ++
Sbjct: 1062 D-NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 1120
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML---- 485
++ + G + E+ G + +TF S L C + + + + ++
Sbjct: 1121 MACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGF 1180
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG-NVEM 544
D+ I + +V M G++G + EA++++ +P P +L+G H N E
Sbjct: 1181 HDFLIVGNA-----LVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG---HAENEEP 1231
Query: 545 GERIADALMKMEPAGSGSYVLM 566
E + + E +Y+ M
Sbjct: 1232 NEAVKAYKLIREKGIPANYITM 1253
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 217/447 (48%), Gaps = 15/447 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
Y K G A +F+ + +VSW ++SG+ ++ + A M GV + T
Sbjct: 74 FYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFT 133
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y +AL C G+Q+ I K ++V +AL+ +S+ G++ +A +F M
Sbjct: 134 YGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMM 193
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D VSWNA++ GY G + ++ M+R GL D + S A L +
Sbjct: 194 ERDVVSWNAMIGGYAVQG-FADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIAN 252
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS------ 233
QIHG+ ++GYG++ V +L++ Y+K A + + M +++ S T +I+
Sbjct: 253 QIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEG 312
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ DA+ LFKEM + +DV +++ + G IH +K + ++
Sbjct: 313 IYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMG 372
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESK 352
N LI MYA+ ++D+++ FDE+ + +ISW +LISGYA++G AV + + K K
Sbjct: 373 NALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFK 432
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSIFES 411
PN TF S+L A + G C ++++ K + S ++D++ ++G + E+
Sbjct: 433 PNDVTFLSLLFACSHTGLTA--EGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEA 490
Query: 412 QRVFNETQEKSEFA-WTAIISALARHG 437
+ + K + W AI+ A + +G
Sbjct: 491 YNLLCKIDIKHNASLWGAILGASSIYG 517
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 184/383 (48%), Gaps = 13/383 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ + K G+ + A +F + D+VSWN ++ G+ +DD+ M G+V D
Sbjct: 173 VDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDC 232
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L + G + Q+H +I + G S V LI Y++ G L A+ +
Sbjct: 233 YTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKG 292
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD S A+++GY +G Y V+A+ EM + + +D V S + C + + L
Sbjct: 293 MLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFAL 352
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G QIH ++K V++GN L+ Y+K DA + F M ++NVISWT++IS +
Sbjct: 353 GTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAK 412
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEPS 291
AVSL+K+M G PNDVTF+ L+ A S L EG + + K N
Sbjct: 413 HGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAE 472
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALI---SGYAQNGLSLAAVQAFFGV 347
+C++ ++AR ++++ + ++ + S W A++ S Y L A F +
Sbjct: 473 HYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNM 532
Query: 348 IKESKPNAYTFGSVLNAVGAAED 370
E+ N S+ +A G +D
Sbjct: 533 QPENSVNYVVLASIYSAAGLWDD 555
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 172/368 (46%), Gaps = 14/368 (3%)
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
RLD + C +K + G IH I G+G+ + + L+ Y K A
Sbjct: 27 RLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARN 86
Query: 216 VFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
VF M +R+V+SWT M+S E A LF +MR GV N T+ + A +
Sbjct: 87 VFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRC 146
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+ G + G K F+ V + L+ +++ M+D+ +F + R+++SWNA+I G
Sbjct: 147 LDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGG 206
Query: 331 YAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
YA G + + F +++ P+ YT GSVL A +AE L + H I ++G
Sbjct: 207 YAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRA--SAEGGGLIIANQIHGIITQLGYG 264
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE-SVMNQFKE 448
S IV L++ Y K GS+ ++ + +K F+ TA+I+ A G Y ++ FKE
Sbjct: 265 SYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKE 324
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGR 506
M + D + S+L +C G + LK +PS D + ++DM +
Sbjct: 325 MNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALK---YQPSYDVAMGNALIDMYAK 381
Query: 507 VGRLEEAE 514
G +E+A+
Sbjct: 382 SGEIEDAK 389
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
Query: 362 LNAV-----GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
LNAV G +E S G+ H+ I ++ + L++MY K G+I ++ VF+
Sbjct: 744 LNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFD 803
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG-MIH 475
E + ++E +W+ ++S R G YE + F +M GV P+ S++T C R+G M
Sbjct: 804 EMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMAD 863
Query: 476 KGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
+G + ++K + D Y + +V G +G + A++L ++P
Sbjct: 864 EGFQVHGFVVKTGIL---GDVYVGTALVHFYGSIGLVYNAQKLFEEMP 908
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 205/634 (32%), Positives = 352/634 (55%), Gaps = 17/634 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M + G+ A +F + D+ SWN ++ G+ K ++AL RM G+ D
Sbjct: 138 LSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDV 197
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L C + G ++H+ +++FG EV V NAL+TMY++ G +V AR+VFD
Sbjct: 198 YTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDG 257
Query: 118 MPNKDSVSWNAILSGY--TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M D +SWNA+++G+ + + G+E L ++E ++ + ++ TS A G +
Sbjct: 258 MAVTDCISWNAMIAGHFENHECEAGLELFLTMLE---NEVQPNLMTITSVTVASGMLSEV 314
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
K++HG ++K G+ V+ N L+ Y+ GDA K+F RM ++ +SWT MIS
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++ A+ ++ M L V P+DVT + A + + G +H L F+
Sbjct: 375 EKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N L+ MYA+ + + + +VF ++ ++++SW+++I+G+ N S A+ F ++
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH 494
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN+ TF + L+A A +L+ G+ H+++++ G+ S+ V +ALLD+Y K G
Sbjct: 495 VKPNSVTFIAALSACAATG--ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ F+ EK +W ++S HG + ++ F +M G PD +TF+++L C R
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
GM+ +G LF M + + I P+ HY+CMVD+L RVG+L EA L+ ++P P +V
Sbjct: 613 AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWG 672
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL CRIH +VE+GE A ++++EP +VL+ +LY + G W VA +RK M+ KG
Sbjct: 673 ALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKG 732
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
+ ++ G SW +V + H F + D +HP+ +EI
Sbjct: 733 LEQDNGCSWVEVKGVT--HAFLTDDESHPQIKEI 764
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 205/408 (50%), Gaps = 16/408 (3%)
Query: 86 FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
FGL +GNA+++M R+G + A RVF +MP +D SWN ++ GY + G + EA+
Sbjct: 129 FGLR----LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVG-FLEEALD 183
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
M+ G+R D +F CG + +G+++H ++ G+G V V N L++ Y+
Sbjct: 184 LYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYA 243
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIG 260
KC A KVF M + ISW MI+ + E+ + LF M + V PN +T
Sbjct: 244 KCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITS 303
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
+ A + + V + +HG +K F + + CN LI MY M D+ K+F + ++
Sbjct: 304 VTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKD 363
Query: 321 IISWNALISGYAQNGLSLAAVQAF-FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRC 379
+SW A+ISGY +NG A++ + + P+ T S L A + + G +
Sbjct: 364 AMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDV--GIKL 421
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA-RHGD 438
H G +V +ALL+MY K I ++ VF EK +W+++I+ H
Sbjct: 422 HELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRS 481
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+E+ + F+ M V+P+S+TF++ L+ C G + G+ + +L+
Sbjct: 482 FEA-LYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLR 527
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+G+A+L M + G I+ + RVF + E+ F+W ++ + G E ++ + M G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+RPD TF VL CG GR + +L+ + D + +V M + G + A
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLR-FGFGDEVDVLNALVTMYAKCGDIVAA 251
Query: 514 EEL 516
++
Sbjct: 252 RKV 254
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 214/643 (33%), Positives = 354/643 (55%), Gaps = 15/643 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAV 58
MY G D A +FN ++ + VSWN ++S + K+D DA+ M G+
Sbjct: 144 MYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEF 203
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+S ++ C G Q+H+++V+ G D +V+ NAL+ MY + GR+ A +F++M
Sbjct: 204 GFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKM 263
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P+ D VSWNA++SG +G + AI L++M GL + + +S AC +LG
Sbjct: 264 PDSDVVSWNALISGCVLNG-HDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+QIHG IK + +G L+ Y+K DA KVF M R++I +IS
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHG 382
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
++A+SLF E+R +G+ N T ++ + + R +H L +K F+ + V
Sbjct: 383 GRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVV 442
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N LI Y + + D+ +VF+E S +II+ ++I+ +Q A++ F ++++ +
Sbjct: 443 NGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLE 502
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ + S+LNA + + + G++ H+H+IK SD G+AL+ Y K GSI +++
Sbjct: 503 PDPFVLSSLLNACASLS--AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 560
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
F+ E+ +W+A+I LA+HG + + F M ++G+ P+ IT SVL C G
Sbjct: 561 LAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ + + F+SM + + I+ + +HYSCM+D+LGR G+L++A ELV +P S+ +L
Sbjct: 621 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGAL 680
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
LGA R+H + E+G+ A+ L +EP SG++VL++N YA G W VA +RK MK ++
Sbjct: 681 LGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIK 740
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
KE SW +V D +H F GD +HP ++EIY LG M
Sbjct: 741 KEPAMSWIEVK--DKVHTFIVGDKSHPMTKEIYAKLVELGDLM 781
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 161/556 (28%), Positives = 275/556 (49%), Gaps = 25/556 (4%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + +P VSW+++++ + + A+ M GV + L D
Sbjct: 59 VFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAR- 117
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN-KDSVSWNAILS 131
G Q+H++ + G S+V+V NAL+ MY +G + +ARRVF+E + +++VSWN ++S
Sbjct: 118 --LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
Y ++ G +AI EM+ G++ F+ +AC +N+E G+Q+H + ++MGY
Sbjct: 176 AYVKNDQCG-DAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEM 246
V N L+ Y K A+ +F +M D +V+SW +IS +N D A+ L +M
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+ G+ PN T ++ A S GR IHG IK N S+ + L+ MYA+ +
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV 365
D+ KVFD + R++I NALISG + G A+ F+ + KE N T +VL +
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST 414
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ E S ++ H+ +K+G D V + L+D Y K + ++ RVF E A
Sbjct: 415 ASLEAASTT--RQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIA 472
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
T++I+AL++ E + F EM KG+ PD S+L C +G+ + ++
Sbjct: 473 CTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532
Query: 486 KDYHIEPSPDHYS--CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
K + D ++ +V + G +E+AE +P G+ +++G HG+
Sbjct: 533 KRQFMS---DAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGH-- 586
Query: 544 MGERIADALMKMEPAG 559
G+R + +M G
Sbjct: 587 -GKRALELFGRMVDEG 601
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 235/451 (52%), Gaps = 14/451 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G+ D A IF + + D+VSWN ++SG A+ L+M G+V +
Sbjct: 244 VDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNV 303
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ L C F G Q+H ++K DS+ Y+G L+ MY++ L +AR+VFD
Sbjct: 304 FTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDW 363
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++D + NA++SG + G + EA+ E+ ++GL ++ + + + +
Sbjct: 364 MFHRDLILCNALISGCSHGGRHD-EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAAST 422
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
+Q+H +++K+G+ V N L+ +Y KC DAN+VF ++I+ T+MI+
Sbjct: 423 TRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQ 482
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E A+ LF EM G+ P+ L++A + + ++G+ +H IK F+S+
Sbjct: 483 CDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA 542
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ YA+ S++D+E F L R ++SW+A+I G AQ+G A++ F ++ E
Sbjct: 543 GNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGI 602
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFE 410
PN T SVL A A + +R + + ++ G+D S ++D+ G+ G + +
Sbjct: 603 NPNHITMTSVLCACNHAGLVD--EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660
Query: 411 SQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ + N ++ + W A++ A H D E
Sbjct: 661 AMELVNSMPFQANASIWGALLGASRVHKDPE 691
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 152/579 (26%), Positives = 268/579 (46%), Gaps = 55/579 (9%)
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
A T S L+ + L G LH+ ++K G S N LI+ YS+ R ARRVFD
Sbjct: 4 AGTISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFD 61
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E+P+ VSW+++++ Y+ +G AI A M +G+ + + +
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNG-LPRSAIQAFHGMRAEGVCCNEFALPVVLKCV---PDAR 117
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMISMN 235
LG Q+H +++ G+G+ V V N L++ Y DA +VF +RN +SW ++S
Sbjct: 118 LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAY 177
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ DA+ +F EM G+ P + F +++A + ++ GR +H + ++ + +
Sbjct: 178 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDV 237
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
N L+ MY + + + +F+++ +++SWNALISG NG A++ +K
Sbjct: 238 FTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ-MKY 296
Query: 351 SK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S PN +T S+L A A L G++ H +IK DSD +G L+DMY K +
Sbjct: 297 SGLVPNVFTLSSILKACSGAGAFDL--GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL--- 465
++++VF+ + A+IS + G ++ ++ F E+ +G+ + T +VL
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST 414
Query: 466 -------TVCGRNGMIHKGRHLFDSMLKDYHIE------------------PSPDHYSC- 499
T + + K +FD+ + + I+ S D +C
Sbjct: 415 ASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACT 474
Query: 500 -MVDMLGRVGRLEEAEELVGQIPGG---PGLSVLQSLLGACRIHGNVEMGERIADALMK- 554
M+ L + E A +L ++ P VL SLL AC E G+++ L+K
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534
Query: 555 --MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
M A +G+ ++ + YA+ G E + + +GV
Sbjct: 535 QFMSDAFAGNALVYT--YAKCGSIEDAELAFSSLPERGV 571
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 208/635 (32%), Positives = 349/635 (54%), Gaps = 16/635 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLI--GVVFDA 57
+ +Y G +A IF+++ N +V+WN +++G+ + +FAL ++ G+
Sbjct: 99 IKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSI 158
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ + L C G +G ++H+ +V G S+ +G AL++MY + G + +AR+VFD
Sbjct: 159 ITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDG 218
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +D ++N ++ GY + GD+ +A M + GL+ + +SF S C + L
Sbjct: 219 LHIRDVSTFNVMVGGYAKSGDWE-KAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAW 277
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GK +H + G + V L+ Y+ C A +VF M R+V+SWT MI
Sbjct: 278 GKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAE 337
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ N EDA LF M+ +G+ P+ +T++ +++A +I + R IH F ++ V
Sbjct: 338 NGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLV 397
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
L+ MYA+ +++D+ +VFD + R+++SW+A+I Y +NG A + F ++K S
Sbjct: 398 STALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFH-LMKRSN 456
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ T+ ++LNA G +L G ++ IK L S +G+AL+ M K GS+
Sbjct: 457 IEPDGVTYINLLNACGHLG--ALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVER 514
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F+ + W A+I + HG+ + F M + RP+S+TF+ VL+ C R
Sbjct: 515 ARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSR 574
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G + +GR F +L+ I P+ Y CMVD+LGR G L+EAE L+ +P P S+
Sbjct: 575 AGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWS 634
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLL ACRIHGN+++ ER A+ + ++P YV +S++YA G WE VA +RK M+S+G
Sbjct: 635 SLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRG 694
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+RKE G +W +V +H F D +HP EIY
Sbjct: 695 IRKEQGCTWIEVA--GKVHTFVVEDRSHPLVGEIY 727
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 250/507 (49%), Gaps = 13/507 (2%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D+ TY C + G Q+ I++ G +Y N LI +YS G + EAR++
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD + NK V+WNA+++GY Q G EA +M+ +GL ++F S AC
Sbjct: 115 FDSVENKTVVTWNALIAGYAQVGHVK-EAFALFRQMVDEGLEPSIITFLSVLDACSSPAG 173
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L GK++H + G+ + +G L+S Y K DA +VF +H R+V ++ M+
Sbjct: 174 LNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGG 233
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
S + E A LF M+ G+ PN ++F+ ++ + G+ +H C+ + +
Sbjct: 234 YAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDD 293
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V LI MY S++ + +VFD + R+++SW +I GYA+NG ++ F ++
Sbjct: 294 IRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENG-NIEDAFGLFATMQ 352
Query: 350 ES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
E +P+ T+ ++NA + + L H + HS + G +D +V +AL+ MY K G+
Sbjct: 353 EEGIQPDRITYMHIMNACAISAN--LNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGA 410
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I ++++VF+ + +W+A+I A +G F M+ + PD +T++++L
Sbjct: 411 IKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNA 470
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
CG G + G ++ +K + P + ++ M + G +E A + + ++
Sbjct: 471 CGHLGALDVGMEIYTQAIKADLVSHVPLG-NALIIMNAKHGSVERARYIFDTMVRRDVIT 529
Query: 528 VLQSLLGACRIHGNVEMGERIADALMK 554
+++G +HGN + D ++K
Sbjct: 530 -WNAMIGGYSLHGNAREALYLFDRMLK 555
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 218/645 (33%), Positives = 349/645 (54%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+ +Y ++G A +F+N+ D V WN +L+G+ K+ D A+ L M + ++
Sbjct: 100 IKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNS 159
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT++ LS C G QLH + V GL+ + V N L+ MYS+ L AR++FD
Sbjct: 160 VTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDT 219
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
P D VSWN I+SGY Q+G G EA M+ G++ D ++F S +L+
Sbjct: 220 SPQSDLVSWNGIISGYVQNGLMG-EAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKH 278
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
K+IHG I+ V + + L+ Y KC A K+ + + + TTMIS +
Sbjct: 279 CKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVL 338
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++A+ F+ + + + P VTF + A + + G+ +HG IKT + V
Sbjct: 339 NGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHV 398
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
+ ++ MYA+ + + +VF+ ++ ++ I WN++I+ +QNG A+ F + E
Sbjct: 399 GSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEG- 457
Query: 353 PNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
Y S+ A+ A ++ +L +G+ H +IK L SD S+L+DMY K G++ S
Sbjct: 458 -TRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFS 516
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+RVF+ QE++E +W +IISA HGD + + F EM G++PD +TFL +++ CG
Sbjct: 517 RRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHA 576
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + +G + M ++Y I +HY+C+ DM GR GRL+EA E + +P P V +
Sbjct: 577 GQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGT 636
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGAC IHGNVE+ E + L ++P SG YVL++N+ A G W V +R MK +GV
Sbjct: 637 LLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGV 696
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
RK G+SW +V + H F + D +HP + +IY + + L E+K
Sbjct: 697 RKVPGYSWIEVN--NATHMFVAADGSHPLTAQIYSVLDSLLLELK 739
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 267/522 (51%), Gaps = 23/522 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAVT 59
MY ++G A +F L +WN ++ GF + + AL F L+M GV D T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ + C + G +H + GL +V+VG++LI +Y+ G L +A+ +FD +P
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
KDSV WN +L+GY ++GD G AI +EM ++ + V+F S C E L+LG
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSG-NAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
Q+HG+++ G V N L++ YSKC+ A K+F +++SW +IS +
Sbjct: 180 QLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNG 239
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A LF+ M G+ P+ +TF + ++ +K + IHG I+ + + + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI +Y + ++ ++K+ + S + + +ISGY NG + A++AF +++E KP
Sbjct: 300 ALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ TF S+ A ++L G+ H IIK LD VGSA+LDMY K G + + R
Sbjct: 360 TSVTFSSIFPAFAGLAALNL--GKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VFN EK W ++I++ +++G +N F++M +G R D ++ L+ C
Sbjct: 418 VFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPA 477
Query: 474 IHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRL 510
+H G+ + M+K D + E S ++DM + G L
Sbjct: 478 LHYGKEIHGLMIKGPLRSDLYAESS------LIDMYAKCGNL 513
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 214/643 (33%), Positives = 354/643 (55%), Gaps = 15/643 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAV 58
MY G D A +FN ++ + VSWN ++S + K+D DA+ M G+
Sbjct: 144 MYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEF 203
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+S ++ C G Q+H+++V+ G D +V+ NAL+ MY + GR+ A +F++M
Sbjct: 204 GFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKM 263
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P+ D VSWNA++SG +G + AI L++M GL + + +S AC +LG
Sbjct: 264 PDSDVVSWNALISGCVLNG-HDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+QIHG IK + +G L+ Y+K DA KVF M R++I +IS
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHG 382
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
++A+SLF E+R +G+ N T ++ + + R +H L +K F+ + V
Sbjct: 383 GRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVV 442
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N LI Y + + D+ +VF+E S +II+ ++I+ +Q A++ F ++++ +
Sbjct: 443 NGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLE 502
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ + S+LNA + + + G++ H+H+IK SD G+AL+ Y K GSI +++
Sbjct: 503 PDPFVLSSLLNACASLS--AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 560
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
F+ E+ +W+A+I LA+HG + + F M ++G+ P+ IT SVL C G
Sbjct: 561 LAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ + + F+SM + + I+ + +HYSCM+D+LGR G+L++A ELV +P S+ +L
Sbjct: 621 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGAL 680
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
LGA R+H + E+G+ A+ L +EP SG++VL++N YA G W VA +RK MK ++
Sbjct: 681 LGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIK 740
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
KE SW +V D +H F GD +HP ++EIY LG M
Sbjct: 741 KEPAMSWIEVK--DKVHTFIVGDKSHPMTKEIYAKLVELGDLM 781
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 161/556 (28%), Positives = 274/556 (49%), Gaps = 25/556 (4%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
F+ + +P VSW+++++ + + A+ M GV + L D
Sbjct: 59 FFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAR- 117
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN-KDSVSWNAILS 131
G Q+H++ + G S+V+V NAL+ MY +G + +ARRVF+E + +++VSWN ++S
Sbjct: 118 --LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
Y ++ G +AI EM+ G++ F+ +AC +N+E G+Q+H + ++MGY
Sbjct: 176 AYVKNDQCG-DAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEM 246
V N L+ Y K A+ +F +M D +V+SW +IS +N D A+ L +M
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+ G+ PN T ++ A S GR IHG IK N S+ + L+ MYA+ +
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV 365
D+ KVFD + R++I NALISG + G A+ F+ + KE N T +VL +
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST 414
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ E S ++ H+ +K+G D V + L+D Y K + ++ RVF E A
Sbjct: 415 ASLEAASTT--RQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIA 472
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
T++I+AL++ E + F EM KG+ PD S+L C +G+ + ++
Sbjct: 473 CTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532
Query: 486 KDYHIEPSPDHYS--CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
K + D ++ +V + G +E+AE +P G+ +++G HG+
Sbjct: 533 KRQFMS---DAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGH-- 586
Query: 544 MGERIADALMKMEPAG 559
G+R + +M G
Sbjct: 587 -GKRALELFGRMVDEG 601
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 235/451 (52%), Gaps = 14/451 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G+ D A IF + + D+VSWN ++SG A+ L+M G+V +
Sbjct: 244 VDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNV 303
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ L C F G Q+H ++K DS+ Y+G L+ MY++ L +AR+VFD
Sbjct: 304 FTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDW 363
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++D + NA++SG + G + EA+ E+ ++GL ++ + + + +
Sbjct: 364 MFHRDLILCNALISGCSHGGRHD-EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAAST 422
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
+Q+H +++K+G+ V N L+ +Y KC DAN+VF ++I+ T+MI+
Sbjct: 423 TRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQ 482
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E A+ LF EM G+ P+ L++A + + ++G+ +H IK F+S+
Sbjct: 483 CDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA 542
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ YA+ S++D+E F L R ++SW+A+I G AQ+G A++ F ++ E
Sbjct: 543 GNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGI 602
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFE 410
PN T SVL A A + +R + + ++ G+D S ++D+ G+ G + +
Sbjct: 603 NPNHITMTSVLCACNHAGLVD--EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660
Query: 411 SQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ + N ++ + W A++ A H D E
Sbjct: 661 AMELVNSMPFQANASIWGALLGASRVHKDPE 691
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 151/579 (26%), Positives = 267/579 (46%), Gaps = 55/579 (9%)
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
A T S L+ + L G LH+ ++K G S N LI+ YS+ R ARR FD
Sbjct: 4 AGTISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFD 61
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E+P+ VSW+++++ Y+ +G AI A M +G+ + + +
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNG-LPRSAIQAFHGMRAEGVCCNEFALPVVLKCV---PDAR 117
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMISMN 235
LG Q+H +++ G+G+ V V N L++ Y DA +VF +RN +SW ++S
Sbjct: 118 LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAY 177
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ DA+ +F EM G+ P + F +++A + ++ GR +H + ++ + +
Sbjct: 178 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDV 237
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
N L+ MY + + + +F+++ +++SWNALISG NG A++ +K
Sbjct: 238 FTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ-MKY 296
Query: 351 SK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S PN +T S+L A A L G++ H +IK DSD +G L+DMY K +
Sbjct: 297 SGLVPNVFTLSSILKACSGAGAFDL--GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL--- 465
++++VF+ + A+IS + G ++ ++ F E+ +G+ + T +VL
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST 414
Query: 466 -------TVCGRNGMIHKGRHLFDSMLKDYHIE------------------PSPDHYSC- 499
T + + K +FD+ + + I+ S D +C
Sbjct: 415 ASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACT 474
Query: 500 -MVDMLGRVGRLEEAEELVGQIPGG---PGLSVLQSLLGACRIHGNVEMGERIADALMK- 554
M+ L + E A +L ++ P VL SLL AC E G+++ L+K
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534
Query: 555 --MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
M A +G+ ++ + YA+ G E + + +GV
Sbjct: 535 QFMSDAFAGNALVYT--YAKCGSIEDAELAFSSLPERGV 571
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 212/645 (32%), Positives = 357/645 (55%), Gaps = 15/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M + G+ A +F + D+ SWN ++ G+ K+ ++AL RM G D
Sbjct: 136 LSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDV 195
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L C G ++H+ +++FGL EV V NAL+TMY++ G + AR+VFD
Sbjct: 196 YTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDG 255
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILAL-IEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M D +SWNA+++G+ ++ + EA L L + M+ + + ++ TS A G +L+
Sbjct: 256 MSLTDCISWNAMIAGHFENHE--CEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLD 313
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
K+IH +++K G+ T V+ N L+ YS G+A VF RM R+ +SWT MIS
Sbjct: 314 FAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYE 373
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ A+ ++ M ++ V P+DVT + A + + G +H L F+
Sbjct: 374 KNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIV 433
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L+ MYA+ + ++ + +VF + +++ISW+++I+G+ N + A+ F ++ +
Sbjct: 434 VANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLADV 493
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN+ TF + A SL+ G+ H+H+++ G+ S+ V +ALLD+Y K G +
Sbjct: 494 KPNSVTF--IAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYA 551
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
F K +W +++ HG + ++ F EM G PD +TF+++L C R
Sbjct: 552 WAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRA 611
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
GM+ +G LF SM + Y I P+ HY+CMVD+L RVGRL E + ++P P +V +
Sbjct: 612 GMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGA 671
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL CRIH N+E+GE A ++++EP +G +VL+S+LYA+ G W V+ +RK M+ KG+
Sbjct: 672 LLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGL 731
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ G SW +V +H F + D +HP+ +EI + + + MK
Sbjct: 732 EHDYGCSWVEVK--GAIHAFLTDDESHPQIKEINDVLDGIYERMK 774
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 203/400 (50%), Gaps = 12/400 (3%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+GNA+++M R+G A +VF +MP +D SWN ++ GY + G + EA+ M+
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAG-FLEEALDLYHRMLWA 189
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G R D +F +CG +L +G+++H ++ G G V V N L++ Y+KC A
Sbjct: 190 GARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAA 249
Query: 214 NKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
KVF M + ISW MI+ + E+ + LF M D V PN +T + A +
Sbjct: 250 RKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLL 309
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ + + IH L +K F ++ + CN LI MY+ M ++ VF + R+ +SW A+I
Sbjct: 310 SDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMI 369
Query: 329 SGYAQNGLSLAAVQAF-FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
SGY +NG A++ + + P+ T S L A + + + G + H G
Sbjct: 370 SGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDV--GIKLHELATSKG 427
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA-RHGDYESVMNQF 446
+V +AL++MY K I ++ VF +K +W+++I+ H ++E+ + F
Sbjct: 428 FIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEA-LYYF 486
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ M V+P+S+TF++ L C G + G+ + +L+
Sbjct: 487 RHMLAD-VKPNSVTFIAALAACAATGSLRCGKEIHAHVLR 525
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+G+A+L M + G + + +VF + E+ F+W ++ + G E ++ + M G
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
RPD TF VL CG + GR + +L+ + + D + +V M + G +E A
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLR-FGLGVEVDVLNALVTMYAKCGDVEAA 249
Query: 514 EEL 516
++
Sbjct: 250 RKV 252
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 224/657 (34%), Positives = 373/657 (56%), Gaps = 31/657 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFD 56
+++Y K G + A IF + N D+VSW+ ++S F + A+ L M +G +
Sbjct: 68 ISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPN 127
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRW-GRLVEARRV 114
++ + C + G ++ +VK G L+++V VG LI M+ + G L A +V
Sbjct: 128 EYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKV 187
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD+MP ++ V+W +++ + Q G +AI ++M G D +++S SAC
Sbjct: 188 FDKMPERNLVTWTLMITRFAQLG-CARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 246
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG---DANKVFRRMHDRNVISWTTM 231
L LGKQ+H I++G V VG L+ Y+KC G D+ KVF +M + NV+SWT +
Sbjct: 247 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 306
Query: 232 ISMNRE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE--GRMIHGLCIK 283
I+ + +A+ LF +M + PN +F ++ A GNL G ++ +K
Sbjct: 307 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC--GNLSDPYTGEQVYSYAVK 364
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
S V N LI+MYAR M+D+ K FD L + ++S+NA++ GYA+N L + +A
Sbjct: 365 LGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKN---LKSEEA 421
Query: 344 F--FGVIKESKP--NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F F I ++ +A+TF S+L+ GAA ++ G++ H ++K G S+ + +AL+
Sbjct: 422 FLLFNEIADTGIGISAFTFASLLS--GAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 479
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
MY + G+I + +VFNE ++++ +WT++I+ A+HG + F +M G +P+ I
Sbjct: 480 SMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEI 539
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
T+++VL+ C GMI +G+ F+SM K++ I P +HY+CMVD+LGR G L EA E +
Sbjct: 540 TYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINS 599
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P V ++LLGACR+HGN E+G A+ +++ EP +Y+L+SNL+A G W+ V
Sbjct: 600 MPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 659
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+RK MK + + KE G SW +V + +H F G+ +HP++ +IY+ + L S++K
Sbjct: 660 VKIRKSMKERNLIKEAGCSWIEVE--NRVHRFHVGETSHPQAWQIYQELDQLASKIK 714
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 248/478 (51%), Gaps = 17/478 (3%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D TYS L C+ F G +H +++ GL+ + V N LI++YS+ G AR +F
Sbjct: 25 DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 84
Query: 116 DEMPNK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
+ M NK D VSW+A++S + + +AI ++M+ G + F + AC +
Sbjct: 85 EGMGNKRDLVSWSAMVSCFANNS-MEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANY 143
Query: 175 LELGKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCE-VTGDANKVFRRMHDRNVISWTTMI 232
+G+ I+G +K GY V VG L+ + K G A KVF +M +RN+++WT MI
Sbjct: 144 AWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMI 203
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + DA+ LF +M L G P+ T+ ++ A + L+ G+ +H I+
Sbjct: 204 TRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLA 263
Query: 288 SEPSVCNCLITMYARFE---SMQDSEKVFDELSCREIISWNALISGYAQNG-LSLAAVQA 343
+ V L+ MYA+ S+ DS KVF+++ ++SW A+I+ Y Q+G A++
Sbjct: 264 LDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIEL 323
Query: 344 FFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
F +I +PN ++F SVL A G D G++ +S+ +K+G+ S VG++L+ MY
Sbjct: 324 FCKMISGHIRPNHFSFSSVLKACGNLSDPYT--GEQVYSYAVKLGIASVNCVGNSLISMY 381
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
+ G + ++++ F+ EK+ ++ AI+ A++ E F E+ + G+ + TF
Sbjct: 382 ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFA 441
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
S+L+ G + KG + +LK + + + + ++ M R G +E A ++ ++
Sbjct: 442 SLLSGAASIGAMGKGEQIHGRLLKGGY-KSNQCICNALISMYSRCGNIEAAFQVFNEM 498
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 205/634 (32%), Positives = 352/634 (55%), Gaps = 17/634 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M + G+ A +F + D+ SWN ++ G+ K ++AL RM G+ D
Sbjct: 138 LSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDV 197
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L C + G ++H+ +++FG EV V NAL+TMY++ G +V AR+VFD
Sbjct: 198 YTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDG 257
Query: 118 MPNKDSVSWNAILSGY--TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M D +SWNA+++G+ + + G+E L ++E ++ + ++ TS A G +
Sbjct: 258 MAVTDCISWNAMIAGHFENHECEAGLELFLTMLE---NEVQPNLMTITSVTVASGMLSEV 314
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
K++HG ++K G+ V+ N L+ Y+ GDA K+F RM ++ +SWT MIS
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++ A+ ++ M L V P+DVT + A + + G +H L F+
Sbjct: 375 EKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N L+ MYA+ + + + +VF ++ ++++SW+++I+G+ N S A+ F ++
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH 494
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN+ TF + L+A A +L+ G+ H+++++ G+ S+ V +ALLD+Y K G
Sbjct: 495 VKPNSVTFIAALSACAATG--ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ F+ EK +W ++S HG + ++ F +M G PD +TF+++L C R
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
GM+ +G LF M + + I P+ HY+CMVD+L RVG+L EA L+ ++P P +V
Sbjct: 613 AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWG 672
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL CRIH +VE+GE A ++++EP +VL+ +LY + G W VA +RK M+ KG
Sbjct: 673 ALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKG 732
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
+ ++ G SW +V + H F + D +HP+ +EI
Sbjct: 733 LEQDNGCSWVEVKGVT--HAFLTDDESHPQIKEI 764
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 202/400 (50%), Gaps = 12/400 (3%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+GNA+++M R+G + A RVF +MP +D SWN ++ GY + G + EA+ M+
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVG-FLEEALDLYYRMLWA 191
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G+R D +F CG + +G+++H ++ G+G V V N L++ Y+KC A
Sbjct: 192 GMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAA 251
Query: 214 NKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
KVF M + ISW MI+ + E+ + LF M + V PN +T + A +
Sbjct: 252 RKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGML 311
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ V + +HG +K F + + CN LI MY M D+ K+F + ++ +SW A+I
Sbjct: 312 SEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMI 371
Query: 329 SGYAQNGLSLAAVQAF-FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
SGY +NG A++ + + P+ T S L A + + G + H G
Sbjct: 372 SGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDV--GIKLHELAQNKG 429
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA-RHGDYESVMNQF 446
+V +ALL+MY K I ++ VF EK +W+++I+ H +E+ + F
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEA-LYYF 488
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ M V+P+S+TF++ L+ C G + G+ + +L+
Sbjct: 489 RYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLR 527
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+G+A+L M + G I+ + RVF + E+ F+W ++ + G E ++ + M G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+RPD TF VL CG GR + +L+ + D + +V M + G + A
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLR-FGFGDEVDVLNALVTMYAKCGDIVAA 251
Query: 514 EEL 516
++
Sbjct: 252 RKV 254
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 216/651 (33%), Positives = 350/651 (53%), Gaps = 24/651 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFAL----RMNLIGVVF 55
+N Y K KA +F+ ++N D++SWN +++G+ ++ SF + RM ++
Sbjct: 50 INFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILP 109
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+A T+S + + FG Q H++ +K +V+VG++L+ MY + G L EAR VF
Sbjct: 110 NAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVF 169
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D MP ++ V+W ++SGY G EA M R+ ++ +FTS SA + +
Sbjct: 170 DRMPERNEVTWATMISGYAIQRLAG-EAFEVFELMRREEEDVNEFAFTSVLSALAVPEFV 228
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
+ GKQIH +++K G +S+ N L++ Y+KC D+ +VF +D+N I+W+ MI
Sbjct: 229 DSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGY 288
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
S + A+ LF M G+ P++ T +G+++A S V+EG+ +H +K F S+
Sbjct: 289 AQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQL 348
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG-----LSLAAVQAFF 345
+ L+ MYA+ +D+ K F+ L +++ W ++I+GY QNG LSL
Sbjct: 349 YIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQME 408
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
G++ PN T SVL A + + G++ H+ IK GL + +GSAL MY K
Sbjct: 409 GIL----PNELTMASVLKA--CSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKC 462
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G++ E VF E+ +W A+IS L+++G + + F+EM + +PD +TF++VL
Sbjct: 463 GNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVL 522
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ G F M ++ + P +HY+CMVD+L R G+L EA+E + G
Sbjct: 523 SACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHG 582
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
L + + LLGACR + N E+G + LM++ S +YVL+S +Y G E V +R
Sbjct: 583 LCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSM 642
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
MK +GV KE G SW ++ +H F GD HP EI L +MK
Sbjct: 643 MKVRGVSKEPGCSWIELK--SNVHVFVVGDQMHPCIGEIRTEILRLSKQMK 691
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 254/457 (55%), Gaps = 17/457 (3%)
Query: 76 GLQLHSLIVKFGLDSE-VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
G LH+ I+K S +Y+ N+LI Y++ L +A+ VFD + NKD +SWN +++GY+
Sbjct: 26 GRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYS 85
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHV-SFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
Q G G ++ L + MR L + +F+ +A + ++ G+Q H V+IKM
Sbjct: 86 QQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYD 145
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNR--EDAVSLFKEMRL 248
V VG+ L++ Y K + +A +VF RM +RN ++W TMIS + R +A +F+ MR
Sbjct: 146 VFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRR 205
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
+ N+ F ++ A+++ V G+ IH L +KT L S+ N L+TMYA+ S+ D
Sbjct: 206 EEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDD 265
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF----FGVIKESKPNAYTFGSVLNA 364
S +VF+ + + I+W+A+I+GYAQ+G S A++ F F I P+ +T VLNA
Sbjct: 266 SLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGI---NPSEFTLVGVLNA 322
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
A +++ G++ H++++K+G +S + +AL+DMY K G ++++ FN Q+
Sbjct: 323 CSDA--CAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLV 380
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
WT++I+ ++G+ E ++ + M+ +G+ P+ +T SVL C +GR +
Sbjct: 381 LWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHART 440
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+K Y + S + M + G LEE + ++P
Sbjct: 441 IK-YGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMP 476
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 200/403 (49%), Gaps = 30/403 (7%)
Query: 171 HEKNLELGKQIHGVSIKMGYGTH-VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
H+K+L+ G+ +H IK+ + + + N L++ Y+KC A VF R+H+++VISW
Sbjct: 19 HQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWN 78
Query: 230 TMISMNRED-------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
+I+ + + LF+ MR D + PN TF G+ A S + + G+ H + I
Sbjct: 79 CLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAI 138
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K + V + L+ MY + + ++ +VFD + R ++W +ISGYA L+ A +
Sbjct: 139 KMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFE 198
Query: 343 AFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F + +E + N + F SVL+A+ E + G++ H +K GL + +AL+ M
Sbjct: 199 VFELMRREEEDVNEFAFTSVLSALAVPEFVD--SGKQIHCLAVKTGLLVFLSILNALVTM 256
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K GS+ +S +VF + +K+ W+A+I+ A+ GD + F M G+ P T
Sbjct: 257 YAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTL 316
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ VL C + +G+ + + +LK E + +VDM + G E+A +
Sbjct: 317 VGVLNACSDACAVEEGKQVHNYLLK-LGFESQLYIMTALVDMYAKSGVTEDARK------ 369
Query: 522 GGPGLSVLQS---LLGACRIHGNVEMGERIADAL-----MKME 556
G + LQ +L I G V+ GE DAL M+ME
Sbjct: 370 ---GFNYLQQPDLVLWTSMIAGYVQNGEN-EDALSLYCRMQME 408
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 211/650 (32%), Positives = 359/650 (55%), Gaps = 17/650 (2%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDAVTYSTAL 64
G A +F ++ PDI +N ++ GF S DA S + +L+ + D TY+ A+
Sbjct: 54 GATRHARALFFSVPKPDIFLFNVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAI 113
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
S D G+ LH+ V G DS ++V +AL+ +Y ++ R+ AR+VFD+MP++D+V
Sbjct: 114 SASPDDN---LGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTV 170
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
WN +++G ++ Y +++ +M+ +G+RLD + + A + +++G I +
Sbjct: 171 LWNTMITGLVRNCCYD-DSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCL 229
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDA 239
++K+G+ V L+S +SKCE A +F + +++S+ +IS E A
Sbjct: 230 ALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECA 289
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
V F+E+ + G + T +GLI S + I G C+K+ + +PSV L T+
Sbjct: 290 VKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTI 349
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTF 358
Y+R + + ++FDE S + + +WNA+ISGYAQ+GL+ A+ F ++ E PN T
Sbjct: 350 YSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTI 409
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
S+L+A A+ +L G+ H I L+ + V +AL+DMY K G+I E+ ++F+ T
Sbjct: 410 TSILSA--CAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLT 467
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
EK+ W +I HG + + F EM + G +P S+TFLSVL C G++ +G
Sbjct: 468 SEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGD 527
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRI 538
+F +M+ Y IEP +HY+CMVD+LGR G+LE+A E + ++P PG +V +LLGAC I
Sbjct: 528 EIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMI 587
Query: 539 HGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
H + + ++ L +++P G YVL+SN+Y+ + ++ A +R+ +K + + K G +
Sbjct: 588 HKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCT 647
Query: 599 WADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+V H F GD +H ++ IY E L +M+ + + E AL
Sbjct: 648 LIEVNGTP--HVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTAL 695
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 212/452 (46%), Gaps = 20/452 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++YCK + A +F+ + + D V WNT+++G ++ DD++ M GV D+
Sbjct: 145 VDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDS 204
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +T L + + G+ + L +K G + YV LI+++S+ + AR +F
Sbjct: 205 TTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGM 264
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH---VSFTSAASACGHEKN 174
+ D VS+NA++SG++ +G+ A+ E++ G R+ V +S GH
Sbjct: 265 IRKPDLVSYNALISGFSCNGETEC-AVKYFRELLVSGQRVSSSTMVGLIPVSSPFGH--- 320
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L L I G +K G SV L + YS+ A ++F ++ V +W MIS
Sbjct: 321 LHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISG 380
Query: 235 N-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
E A+SLF+EM PN VT ++ A + + G+ +H L N
Sbjct: 381 YAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQN 440
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V LI MYA+ ++ ++ ++FD S + ++WN +I GY +G A++ F ++
Sbjct: 441 IYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLH 500
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+P++ TF SVL A A + + G H+ + K ++ + ++D+ G+ G
Sbjct: 501 LGFQPSSVTFLSVLYACSHAGLV--REGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQ 558
Query: 408 IFESQRVFNETQ-EKSEFAWTAIISALARHGD 438
+ ++ + E W ++ A H D
Sbjct: 559 LEKALEFIRKMPVEPGPAVWGTLLGACMIHKD 590
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 221/663 (33%), Positives = 371/663 (55%), Gaps = 24/663 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTY 60
+ K+G A IF ++ ++VS N ++ G ++ ++A+ + M V + +Y
Sbjct: 329 FAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMK-DSVELNPNSY 387
Query: 61 STALS----FCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVF 115
L+ F + G G ++H+ +++ GL ++++ +GN LI MY++ G + +A VF
Sbjct: 388 MIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVF 447
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M NKDSV+WN++++G Q+ + +EA+ EM R L + + SA S+C +
Sbjct: 448 RLMDNKDSVTWNSMITGLDQNKQF-LEAVKTFQEMRRTELYPSNFTMISALSSCASLGWI 506
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+G+Q+H +K+G VSV N L++ Y +C + K F M D + +SW ++I
Sbjct: 507 SVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGAL 566
Query: 236 RE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ +AV F M G PN VTFI ++ A+S +L + G+ IH L +K N ++
Sbjct: 567 ADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAAD 626
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREI-ISWNALISGYAQNGLSLAAVQ-AFFGV 347
++ N L+ Y + M E +F +S R+ +SWN++ISGY N L A+ +F +
Sbjct: 627 TAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMM 686
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
K + + +TF +VL+A A +L+ G H ++ L+SD ++GSAL+DMY K G
Sbjct: 687 QKGQRLDGFTFATVLSA--CATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGR 744
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I + R F ++ ++W ++IS ARHG ++ F +M+ +G PD +TF+ VL+
Sbjct: 745 IDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSA 804
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++++G FDSM + Y + P +H+SCMVD+LGRVG L + E+ + Q+P P +
Sbjct: 805 CSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVL 864
Query: 528 VLQSLLGA-CRIHG-NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ +++LGA CR +G N +G R A+ L++MEP + +Y+L+SN+YA G W+ VA R
Sbjct: 865 IWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVA 924
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
M+ V+KE G SW + DG+H F +GD +HP + IY + L +M+ E
Sbjct: 925 MRKAFVKKEAGCSWVTMK--DGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETR 982
Query: 646 IAL 648
AL
Sbjct: 983 FAL 985
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 265/513 (51%), Gaps = 34/513 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N+Y + G +F+ + ++VSW+ ++SG+ ++ ++A +M G + +
Sbjct: 115 INIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNH 174
Query: 58 VTYSTALSFCLD--HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE-ARRV 114
+ + + C + G FG+Q+H L+ K ++V N LI+MY +V+ ARR
Sbjct: 175 YAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRA 234
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEA--ILALI--EMMRKGLRLDHVSFTSAASACG 170
FD + ++ VS N+++S Y Q GD V A I + + E+M GL+ + +F S SA
Sbjct: 235 FDSIWPRNLVSLNSMISVYCQRGD-AVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATC 293
Query: 171 HEKN--LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
N L L +Q+ K G+ + VG+ L+S ++K G A +F++M RNV+S
Sbjct: 294 SLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSL 353
Query: 229 TTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS----IGNLVKEGRMIHG 279
+I E+AV LF EM+ D V N +++ ++ A + N ++G +H
Sbjct: 354 NGLIIGLVRQKRGEEAVELFMEMK-DSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHA 412
Query: 280 LCIKTNFL-SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
I++ L ++ ++ N LI MYA+ ++ D+ VF + ++ ++WN++I+G QN L
Sbjct: 413 FLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFL 472
Query: 339 AAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
AV+ F + + E P+ +T S L++ + IS+ G++ H +K+GLD D V +A
Sbjct: 473 EAVKTFQEMRRTELYPSNFTMISALSSCASLGWISV--GEQLHCEGLKLGLDLDVSVSNA 530
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM----NQFKEMENKG 453
LL +YG+ G + E Q+ F+ + +W ++I ALA D E M F M G
Sbjct: 531 LLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALA---DSEPSMLEAVESFLVMMRAG 587
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
P+ +TF+++L + G+ + +LK
Sbjct: 588 WDPNRVTFITILAAVSSLSLHELGKQIHALVLK 620
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 136/429 (31%), Positives = 223/429 (51%), Gaps = 24/429 (5%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
+LH + K G +++++ N LI +Y+R G L R+VFDEMP ++ VSW+ ++SGYT++
Sbjct: 94 ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRN- 152
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGH--EKNLELGKQIHGVSIKMGYGTHVS 195
EA +M+ G +H +F S AC E L+ G QIHG+ K Y V+
Sbjct: 153 RMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVT 212
Query: 196 VGNVLMSTYSKCEVTGD-ANKVFRRMHDRNVISWTTMISM--NREDAVSLF-------KE 245
NVL+S Y D A + F + RN++S +MIS+ R DAVS F KE
Sbjct: 213 ASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKE 272
Query: 246 MRLDGVCPNDVTFIGLIHAI-SIGN--LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
+ DG+ PN+ TF LI A S+ N LV +++ + K+ FL + V + L++ +A+
Sbjct: 273 VMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRV-EKSGFLHDLYVGSALVSGFAK 331
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVL 362
S+ ++ +F ++S R ++S N LI G + AV+ F + + N ++ +L
Sbjct: 332 AGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIIL 391
Query: 363 NAVGAAEDISLKHGQR----CHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNE 417
A E L++G+R H+ +I+ GL + I +G+ L++MY K G+I ++ VF
Sbjct: 392 TAF--PEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRL 449
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
K W ++I+ L ++ + + F+EM + P + T +S L+ C G I G
Sbjct: 450 MDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVG 509
Query: 478 RHLFDSMLK 486
L LK
Sbjct: 510 EQLHCEGLK 518
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 149/575 (25%), Positives = 284/575 (49%), Gaps = 33/575 (5%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS----FALRMNLI---GVVFDAVTY 60
G D A F+++ ++VS N+++S + + DA+S F+ + G+ + T+
Sbjct: 226 GMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTF 285
Query: 61 STALSFC--LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+ +S L + G + QL + + K G ++YVG+AL++ +++ G + A+ +F +M
Sbjct: 286 GSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKM 345
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
++ VS N ++ G + G EA+ +E M+ + L+ S+ +A LE G
Sbjct: 346 SYRNVVSLNGLIIGLVRQ-KRGEEAVELFME-MKDSVELNPNSYMIILTAFPEFHVLENG 403
Query: 179 K----QIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
K ++H I+ G +++GN L++ Y+KC DA VFR M +++ ++W +MI+
Sbjct: 404 KRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMIT 463
Query: 234 ---MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
N++ +AV F+EMR + P++ T I + + + + G +H +K
Sbjct: 464 GLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDL 523
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS-LAAVQAFFGV 347
+ SV N L+ +Y +++ +K F + + +SWN+LI A + S L AV++F +
Sbjct: 524 DVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVM 583
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKH-GQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ PN TF ++L AV + +SL G++ H+ ++K + +D + +ALL YGK
Sbjct: 584 MRAGWDPNRVTFITILAAVSS---LSLHELGKQIHALVLKRNVAADTAIENALLACYGKC 640
Query: 406 GSIFESQRVFNETQEKS-EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + + +F+ ++ E +W ++IS + M+ M KG R D TF +V
Sbjct: 641 GDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATV 700
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L+ C + +G + ++ +E S +VDM + GR++ A +P
Sbjct: 701 LSACATVATLERGMEVHGCSVRAC-LESDIVIGSALVDMYAKCGRIDYASRFFEMMP-AR 758
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
L S++ HG+ G + D +M+ G
Sbjct: 759 NLYSWNSMISGYARHGH---GTKSLDLFAQMKLQG 790
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 218/455 (47%), Gaps = 30/455 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K G + A +F ++N D V+WN++++G +++ +A+ M +
Sbjct: 431 INMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSN 490
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +ALS C G QLH +K GLD +V V NAL+ +Y G + E ++ F
Sbjct: 491 FTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSL 550
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + D VSWN+++ +EA+ + + MMR G + V+F + +A EL
Sbjct: 551 MLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHEL 610
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMIS--M 234
GKQIH + +K ++ N L++ Y KC G +F RM DR + +SW +MIS +
Sbjct: 611 GKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYI 670
Query: 235 NRE------DAVSLF--KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+ E D V K RLDG TF ++ A + ++ G +HG ++
Sbjct: 671 HNELLPKAMDMVWFMMQKGQRLDG-----FTFATVLSACATVATLERGMEVHGCSVRACL 725
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S+ + + L+ MYA+ + + + F+ + R + SWN++ISGYA++G ++ F
Sbjct: 726 ESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQ 785
Query: 347 V-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV----GLDSDPIVGSALLDM 401
+ ++ P+ TF VL+A A ++ SH + GL S ++D+
Sbjct: 786 MKLQGPLPDHVTFVGVLSACSHAGLVN-----EGFSHFDSMSEIYGLAPRMEHFSCMVDL 840
Query: 402 YGKRGSIFESQRVFNETQEKSE-FAWTAIISALAR 435
G+ G + + + N+ K W ++ A R
Sbjct: 841 LGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCR 875
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 164/324 (50%), Gaps = 18/324 (5%)
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
+CG + EL Q+ K G+ + + N L++ Y++ G KVF M RN++S
Sbjct: 86 SCGSKDAEELHLQL----FKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVS 141
Query: 228 WTTMIS---MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNL-VKEGRMIHGL 280
W+ +IS NR +A LF++M DG PN F +I A G +K G IHGL
Sbjct: 142 WSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGL 201
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQD-SEKVFDELSCREIISWNALISGYAQNGLSLA 339
KT ++++ + N LI+MY M D + + FD + R ++S N++IS Y Q G +++
Sbjct: 202 MSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVS 261
Query: 340 AVQAFFGVIKES-----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
A F + KE KPN YTFGS+++A + + L ++ + + K G D V
Sbjct: 262 AFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYV 321
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
GSAL+ + K GSI ++ +F + ++ + +I L R E + F EM++ V
Sbjct: 322 GSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKD-SV 380
Query: 455 RPDSITFLSVLTVCGRNGMIHKGR 478
+ +++ +LT ++ G+
Sbjct: 381 ELNPNSYMIILTAFPEFHVLENGK 404
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/650 (32%), Positives = 356/650 (54%), Gaps = 14/650 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
+Y G F A +F ++ D V++NT++SG + + AL M L G+ D VT
Sbjct: 188 LYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVT 247
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++ L+ C G QLHS ++K G+ + +L+ +Y + G + A +F+
Sbjct: 248 VASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGD 307
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ V WN +L Y Q D ++ +M G+ + ++ C +ELG+
Sbjct: 308 RTNVVLWNLMLVAYGQISDLA-KSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGE 366
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR--- 236
QIH +SIK G+ + + V VL+ YSK A K+ + R+V+SWT+MI+
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHD 426
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
E+A++ FKEM+ GV P+++ A + +++G IH + + ++ S+ N
Sbjct: 427 FCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWN 486
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKP 353
L+ +YAR +++ +F E+ ++ I+WN LISG+ Q+ L A+ F + + +K
Sbjct: 487 TLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKY 546
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N +TF S ++A+ DI K G++ H +K G S+ V +AL+ +YGK GSI +++
Sbjct: 547 NVFTFISAISALANLADI--KQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKM 604
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F+E ++E +W II++ ++HG ++ F +M+ +G++P+ +TF+ VL C G+
Sbjct: 605 IFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGL 664
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ +G F SM Y + P PDHY+C+VD+LGR G+L+ A V ++P + ++LL
Sbjct: 665 VEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLL 724
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
AC++H N+E+GE A L+++EP S SYVL+SN YA G W +RK MK +G+RK
Sbjct: 725 SACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRK 784
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
E G SW +V + +H F GD HP S++IY+ L + + K+E
Sbjct: 785 EPGRSWIEVK--NAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQE 832
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 265/553 (47%), Gaps = 22/553 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K+G +A +F L++ D VSW +LSG+ + +A +M+ V+
Sbjct: 85 IDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTP 144
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS C + F G +H+ + K SE +VGNALI +Y +G A RVF +
Sbjct: 145 YVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCD 204
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D V++N ++SG+ Q G +G A+ EM GLR D V+ S +AC +L+
Sbjct: 205 MLFCDRVTFNTLISGHAQCG-HGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQK 263
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GKQ+H +K G L+ Y KC A+ +F NV+ W M+
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQ 323
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + +F +M+ G+ PN T+ ++ + ++ G IH L IK F S+ V
Sbjct: 324 ISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYV 383
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
LI MY+++ + + K+ + L R+++SW ++I+GY Q+ A+ F KE +
Sbjct: 384 SGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF----KEMQ 439
Query: 353 -----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
P+ S +A + +++ G + H+ + G +D + + L+++Y + G
Sbjct: 440 DCGVWPDNIGLASAASACAGIK--AMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGR 497
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
E+ +F E K E W +IS + YE + F +M G + + TF+S ++
Sbjct: 498 SEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISA 557
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
I +G+ + +K H + + + ++ + G+ G +E+A+ + ++ +S
Sbjct: 558 LANLADIKQGKQVHGRAVKTGHTSET-EVANALISLYGKCGSIEDAKMIFSEMSLRNEVS 616
Query: 528 VLQSLLGACRIHG 540
+++ +C HG
Sbjct: 617 -WNTIITSCSQHG 628
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 144/503 (28%), Positives = 243/503 (48%), Gaps = 40/503 (7%)
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
L++H+ V GL ++ +GN LI +Y++ G + +AR+VF E+ ++D VSW A+LSGY Q
Sbjct: 63 LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQR 122
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G G EA +M + +S SAC K G+ IH K + + V
Sbjct: 123 G-LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFV 181
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGV 251
GN L++ Y A +VF M + +++ T+IS + E A+ +F EM+L G+
Sbjct: 182 GNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241
Query: 252 CPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKT----NFLSEPSVCNCLITMYARFESM 306
P+ VT L+ A S+G+L K G+ +H +K ++++E S L+ +Y + +
Sbjct: 242 RPDCVTVASLLAACASVGDLQK-GKQLHSYLLKAGMSFDYITEGS----LLDLYVKCGDI 296
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNA 364
+ + +F+ ++ WN ++ Y Q LA FG ++ + PN +T+ +L
Sbjct: 297 ETAHDIFNLGDRTNVVLWNLMLVAYGQIS-DLAKSFEIFGQMQATGIHPNKFTYPCILRT 355
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
I L G++ HS IK G +SD V L+DMY K + +++++ +++
Sbjct: 356 CTCTGQIEL--GEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVV 413
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG-----RNGMIHKGRH 479
+WT++I+ +H E + FKEM++ GV PD+I S + C R G+ R
Sbjct: 414 SWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARV 473
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV--LQSLLGACR 537
D I ++ +V++ R GR EEA L +I ++ L S G R
Sbjct: 474 YVSGYAADISI------WNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSR 527
Query: 538 IHGNVEMGERIADALMKMEPAGS 560
++ M MKM AG+
Sbjct: 528 LYEQALM------VFMKMSQAGA 544
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 183/384 (47%), Gaps = 11/384 (2%)
Query: 142 EAILALIEMMRKGLR-LDHVSFTSAASAC-GHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
E IL+L+ R L T A AC G L +IH S+ G G +GN+
Sbjct: 24 EKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNL 83
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPN 254
L+ Y+K + A +VF+ + R+ +SW M+S + +A L+ +M V P
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPT 143
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
++ A + G L +GRMIH K F SE V N LI +Y F S + +E+VF
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFC 203
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISL 373
++ + +++N LISG+AQ G A+Q F + + +P+ T S+L A + D L
Sbjct: 204 DMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD--L 261
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
+ G++ HS+++K G+ D I +LLD+Y K G I + +FN + W ++ A
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
+ D F +M+ G+ P+ T+ +L C G I G + +K+ E
Sbjct: 322 GQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKN-GFESD 380
Query: 494 PDHYSCMVDMLGRVGRLEEAEELV 517
++DM + L++A +++
Sbjct: 381 MYVSGVLIDMYSKYRCLDKARKIL 404
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 214/631 (33%), Positives = 354/631 (56%), Gaps = 21/631 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + D VSWN +L+ S +A M+ G+ + +AL
Sbjct: 49 VFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARR 108
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G QL SL +K GL + V+ +AL+ +Y++ GR+ +AR+VFD MP +++VSWNA+++G
Sbjct: 109 PAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAG 168
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
YT+ GD A+ +EM R+GL D +F S +A + L Q+HG +K G
Sbjct: 169 YTESGDMA-SALELFLEMEREGLAPDEATFASLLTAV-EGPSCFLMHQLHGKIVKYGSAL 226
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS------MNREDAVSLFKE 245
++V N ++ YS+C D+ ++F + D R++ISW M+ M+ E +
Sbjct: 227 GLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRM 286
Query: 246 MRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
M+ GV P+ +F +I + S G+ +GR+IHGL IK+ VCN LI MY R+
Sbjct: 287 MQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYN 346
Query: 305 S---MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
M+D+ K F+ L ++ +SWN++++GY+Q+GLS A++ F + E+ + + Y F +
Sbjct: 347 ENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSA 406
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
L + ++E L+ G++ H +I G S+ V S+L+ MY K G I ++++ F E +
Sbjct: 407 ALRS--SSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADK 464
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
S W A+I A+HG E+V F EM + D ITF+ ++T C G++ +G +
Sbjct: 465 SSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI 524
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
++M Y + +HY+C VD+ GR G+L++A++L+ +P P V +LLGACRIHG
Sbjct: 525 LNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHG 584
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
NVE+ +A L EP +YVL+S++Y+ G W A +++ MK +G+ K G+SW
Sbjct: 585 NVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWI 644
Query: 601 DVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
+V + +H F++ D +HP+ +EIY M L
Sbjct: 645 EVK--NEVHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 212/415 (51%), Gaps = 19/415 (4%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGR--LVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
H+ ++K G+ + N L+T YSR L ARRVFDE+P +D VSWNA+L+ G
Sbjct: 14 HASLLKSGVAAPT-PWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASG 72
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ EA L M +GL + + SA + + +G Q+ +++K G +V
Sbjct: 73 AHP-EAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAA 131
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVC 252
+ L+ Y+KC DA +VF M +RN +SW +I+ E A+ LF EM +G+
Sbjct: 132 SALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLA 191
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P++ TF L+ A+ G +HG +K +V N IT Y++ S++DS ++
Sbjct: 192 PDEATFASLLTAVE-GPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRI 250
Query: 313 FDEL-SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAE 369
FD + R++ISWNA++ Y NG+ A++ F +++ES P+ Y+F S++++ +E
Sbjct: 251 FDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSC--SE 308
Query: 370 DISLKH-GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS---IFESQRVFNETQEKSEFA 425
H G+ H +IK L+ V +AL+ MY + + ++ + FN K +
Sbjct: 309 HGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVS 368
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
W ++++ ++HG + F+ M ++ VR D F + L ++ G+ +
Sbjct: 369 WNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQI 423
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 232/456 (50%), Gaps = 19/456 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+++Y K G+ A +F+ + + VSWN +++G+ +S D AL L M G+ D
Sbjct: 135 LDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDE 194
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ L+ FL QLH IVK+G + V NA IT YS+ G L ++RR+FD
Sbjct: 195 ATFASLLTAVEGPSCFLMH-QLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDG 253
Query: 118 MPN-KDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACG-HEKN 174
+ + +D +SWNA+L YT +G EA+ + MM++ G+ D SFTS S+C H +
Sbjct: 254 IGDIRDLISWNAMLGAYTHNG-MDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHD 312
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE---VTGDANKVFRRMHDRNVISWTTM 231
G+ IHG+ IK V N L++ Y++ + DA K F + ++ +SW +M
Sbjct: 313 DHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSM 372
Query: 232 ISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
++ + DA+ F+ M + V ++ F + + S +++ G+ IHGL I + F
Sbjct: 373 LTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGF 432
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S V + LI MY++ + D+ K F+E + WNA+I GYAQ+G + F
Sbjct: 433 ASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNE 492
Query: 347 VIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++ P + TF ++ + A + + + ++ K G+ + +D+YG+
Sbjct: 493 MLQRKAPLDHITFVGLITSCSHAGLVD-EGSEILNTMETKYGVPLRMEHYACGVDLYGRA 551
Query: 406 GSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G + +++++ + E W ++ A HG+ E
Sbjct: 552 GQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVE 587
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 224/657 (34%), Positives = 373/657 (56%), Gaps = 31/657 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFD 56
+++Y K G + A IF + N D+VSW+ ++S F + A+ L M +G +
Sbjct: 86 ISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPN 145
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRW-GRLVEARRV 114
++ + C + G ++ +VK G L+++V VG LI M+ + G L A +V
Sbjct: 146 EYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKV 205
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD+MP ++ V+W +++ + Q G +AI ++M G D +++S SAC
Sbjct: 206 FDKMPERNLVTWTLMITRFAQLG-CARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 264
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG---DANKVFRRMHDRNVISWTTM 231
L LGKQ+H I++G V VG L+ Y+KC G D+ KVF +M + NV+SWT +
Sbjct: 265 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 324
Query: 232 ISMNRE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE--GRMIHGLCIK 283
I+ + +A+ LF +M + PN +F ++ A GNL G ++ +K
Sbjct: 325 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC--GNLSDPYTGEQVYSYAVK 382
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
S V N LI+MYAR M+D+ K FD L + ++S+NA++ GYA+N L + +A
Sbjct: 383 LGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKN---LKSEEA 439
Query: 344 F--FGVIKESKP--NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F F I ++ +A+TF S+L+ GAA ++ G++ H ++K G S+ + +AL+
Sbjct: 440 FLLFNEIADTGIGISAFTFASLLS--GAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 497
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
MY + G+I + +VFNE ++++ +WT++I+ A+HG + F +M G +P+ I
Sbjct: 498 SMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEI 557
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
T+++VL+ C GMI +G+ F+SM K++ I P +HY+CMVD+LGR G L EA E +
Sbjct: 558 TYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINS 617
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P V ++LLGACR+HGN E+G A+ +++ EP +Y+L+SNL+A G W+ V
Sbjct: 618 MPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 677
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+RK MK + + KE G SW +V + +H F G+ +HP++ +IY+ + L S++K
Sbjct: 678 VKIRKSMKERNLIKEAGCSWIEVE--NRVHRFHVGETSHPQAWQIYQELDQLASKIK 732
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 248/478 (51%), Gaps = 17/478 (3%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D TYS L C+ F G +H +++ GL+ + V N LI++YS+ G AR +F
Sbjct: 43 DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 102
Query: 116 DEMPNK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
+ M NK D VSW+A++S + + +AI ++M+ G + F + AC +
Sbjct: 103 EGMGNKRDLVSWSAMVSCFANNS-MEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANY 161
Query: 175 LELGKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCE-VTGDANKVFRRMHDRNVISWTTMI 232
+G+ I+G +K GY V VG L+ + K G A KVF +M +RN+++WT MI
Sbjct: 162 AWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMI 221
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + DA+ LF +M L G P+ T+ ++ A + L+ G+ +H I+
Sbjct: 222 TRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLA 281
Query: 288 SEPSVCNCLITMYARFE---SMQDSEKVFDELSCREIISWNALISGYAQNG-LSLAAVQA 343
+ V L+ MYA+ S+ DS KVF+++ ++SW A+I+ Y Q+G A++
Sbjct: 282 LDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIEL 341
Query: 344 FFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
F +I +PN ++F SVL A G D G++ +S+ +K+G+ S VG++L+ MY
Sbjct: 342 FCKMISGHIRPNHFSFSSVLKACGNLSDPYT--GEQVYSYAVKLGIASVNCVGNSLISMY 399
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
+ G + ++++ F+ EK+ ++ AI+ A++ E F E+ + G+ + TF
Sbjct: 400 ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFA 459
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
S+L+ G + KG + +LK + + + + ++ M R G +E A ++ ++
Sbjct: 460 SLLSGAASIGAMGKGEQIHGRLLKGGY-KSNQCICNALISMYSRCGNIEAAFQVFNEM 516
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 222/646 (34%), Positives = 364/646 (56%), Gaps = 15/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M+ G ++A +F+ ++ D +SWN++++ + ++ ++L M + ++
Sbjct: 173 ISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINS 232
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ST L+ C + +G +HSL++KFG +S V N LITMYS GR +A VF
Sbjct: 233 TTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQG 292
Query: 118 MPNKDSVSWNAILSGYTQDGD-YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M KD +SWN++++ Y QDG+ +LA + MR+G ++V+FTSA +AC +
Sbjct: 293 MVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGA--NYVTFTSALAACSDPEFAT 350
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
GK +H + I +G +V VGN L++ Y+K + +A KVF+ M R+ ++W +I
Sbjct: 351 EGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHA 410
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNFLSEP 290
S ++A+ FK MR +GV N +T ++ A ++ +L++ G IH I T F S+
Sbjct: 411 DSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDE 470
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N LITMYA+ + S +FD L+ + +WNA+++ A +G A++ F ++
Sbjct: 471 YVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALK-FLLEMRR 529
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ N F AA+ L+ GQ+ H +K+G DS+P V SA +DMYGK G I +
Sbjct: 530 AGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDD 589
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
R+ +S +W + S+ +RHG +E F EM N GV+PD +TF+S+L+ C
Sbjct: 590 VLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSH 649
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
GM+ +G +DSM+K++ I H C++D+LGR GR EAE + ++P P V +
Sbjct: 650 GGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWR 709
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLL AC+ HGN+E+G + + L+K++P+ +YVL SN+ A G WE V +R+ M
Sbjct: 710 SLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNK 769
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++K+ SW + + L G GD++HP++ EIY E L +K
Sbjct: 770 IKKKPACSWVKLKNKLSLFGM--GDHSHPQASEIYAKLEELKKMIK 813
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 153/526 (29%), Positives = 268/526 (50%), Gaps = 12/526 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+++Y G A+ +F + ++VSW ++ + + ++ RM G+ +
Sbjct: 72 VHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCND 131
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ +S C+ E L G Q+ ++K+GL++ V V N+LI+M+ +G + EA VF
Sbjct: 132 NTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSG 191
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D++SWN++++ Y ++G E++ M R ++ + ++ + CG NL+
Sbjct: 192 MDEHDTISWNSMIAAYIRNG-LCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKW 250
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+ IH + +K G+ ++V N L++ YS DA VF+ M ++++ISW +M++
Sbjct: 251 GRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQ 310
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N DA+ L M N VTF + A S EG+++H L I V
Sbjct: 311 DGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIV 370
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+T+YA+ M +++KVF + R+ ++WNALI G+A + A++AF + +E
Sbjct: 371 GNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGV 430
Query: 353 P-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P N T +VL A A D+ L+HG H+ II G SD V ++L+ MY K G + S
Sbjct: 431 PINYITISNVLGACLAPNDL-LEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSS 489
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+F+ K+ AW A+++A A HG E + EM GV D +F L +
Sbjct: 490 NNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKL 549
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
++ +G+ L +K + +P S +DM G+ G +++ ++
Sbjct: 550 AILEEGQQLHGLAVK-LGCDSNPFVASATMDMYGKCGEIDDVLRII 594
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 139/449 (30%), Positives = 228/449 (50%), Gaps = 17/449 (3%)
Query: 32 LSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLF-GLQLHSLIVKFG 87
+SGF ++ +++ F M GV + ++ ++ C E L G+Q+H IVK G
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 88 LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
L S+V+VG +L+ +Y +G +A +VF EM K+ VSW A++ Y DYG +++
Sbjct: 61 LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYV---DYGEPSMVMN 117
Query: 148 I--EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
I M +G+ + + +S S C +N LG Q+ G IK G T+VSV N L+S +
Sbjct: 118 IYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFG 177
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIG 260
+A VF M + + ISW +MI+ ++++ F M N T
Sbjct: 178 YFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLST 237
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
++ + +K GR IH L +K + S N LITMY+ +D+E VF + ++
Sbjct: 238 MLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKD 297
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRC 379
+ISWN++++ YAQ+G L A++ + + N TF S L A E + G+
Sbjct: 298 MISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFAT--EGKIL 355
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+ +I VGL + IVG+AL+ +Y K G + E+++VF ++ W A+I A +
Sbjct: 356 HALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEP 415
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ + FK M +GV + IT +VL C
Sbjct: 416 DEALKAFKLMREEGVPINYITISNVLGAC 444
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)
Query: 328 ISGYAQNGLSLAAVQAF-----FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
+SG+ + G +++ F FGV KP+ S++ A +E + L G + H
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGV----KPSGIAVASLVTACERSEWM-LIEGVQVHGF 55
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
I+KVGL SD VG++L+ +YG G ++ +VF E K+ +WTA++ A +G+ V
Sbjct: 56 IVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMV 115
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
MN ++ M ++G+ + T SV++ C G + ++K Y +E + + ++
Sbjct: 116 MNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIK-YGLETNVSVANSLIS 174
Query: 503 MLGRVGRLEEA 513
M G G +EEA
Sbjct: 175 MFGYFGSVEEA 185
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 214/631 (33%), Positives = 354/631 (56%), Gaps = 21/631 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + D VSWN +L+ S +A M+ G+ + +AL
Sbjct: 49 VFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARR 108
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G QL SL +K GL + V+ +AL+ +Y++ GR+ +AR+VFD MP +++VSWNA+++G
Sbjct: 109 PAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAG 168
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
YT+ GD A+ +EM R+GL D +F S +A + L Q+HG +K G
Sbjct: 169 YTESGDMA-SALELFLEMEREGLAPDEATFASLLTAV-EGPSCFLMHQLHGKIVKYGSAL 226
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS------MNREDAVSLFKE 245
++V N ++ YS+C D+ ++F + D R++ISW M+ M+ E +
Sbjct: 227 GLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRM 286
Query: 246 MRLDGVCPNDVTFIGLIHAISI-GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
M+ GV P+ +F +I + S G+ +GR+IHGL IK+ VCN LI MY R+
Sbjct: 287 MQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYN 346
Query: 305 S---MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
M+D+ K F+ L ++ +SWN++++GY+Q+GLS A++ F + E+ + + Y F +
Sbjct: 347 ENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSA 406
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
L + ++E L+ G++ H +I G S+ V S+L+ MY K G I ++++ F E +
Sbjct: 407 ALRS--SSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADK 464
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
S W A+I A+HG E+V F EM + D ITF+ ++T C G++ +G +
Sbjct: 465 SSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI 524
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
++M Y + +HY+C VD+ GR G+L++A++L+ +P P V +LLGACRIHG
Sbjct: 525 LNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHG 584
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
NVE+ +A L EP +YVL+S++Y+ G W A +++ MK +G+ K G+SW
Sbjct: 585 NVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWI 644
Query: 601 DVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
+V + +H F++ D +HP+ +EIY M L
Sbjct: 645 EVK--NEVHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 204/399 (51%), Gaps = 18/399 (4%)
Query: 96 NALITMYSRWGR--LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
N L+T YSR L ARRVFDE+P +D VSWNA+L+ G + EA L M +
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHP-EAWRLLRAMHAQ 87
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
GL + + SA + + +G Q+ +++K G +V + L+ Y+KC DA
Sbjct: 88 GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147
Query: 214 NKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
+VF M +RN +SW +I+ E A+ LF EM +G+ P++ TF L+ A+ G
Sbjct: 148 RQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVE-G 206
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL-SCREIISWNAL 327
+HG +K +V N IT Y++ S++DS ++FD + R++ISWNA+
Sbjct: 207 PSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAM 266
Query: 328 ISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKH-GQRCHSHII 384
+ Y NG+ A++ F +++ES P+ Y+F S++++ +E H G+ H +I
Sbjct: 267 LGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSC--SEHGHDDHQGRVIHGLVI 324
Query: 385 KVGLDSDPIVGSALLDMYGKRGS---IFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
K L+ V +AL+ MY + + ++ + FN K +W ++++ ++HG
Sbjct: 325 KSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSAD 384
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+ F+ M ++ VR D F + L ++ G+ +
Sbjct: 385 ALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQI 423
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 232/456 (50%), Gaps = 19/456 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+++Y K G+ A +F+ + + VSWN +++G+ +S D AL L M G+ D
Sbjct: 135 LDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDE 194
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ L+ FL QLH IVK+G + V NA IT YS+ G L ++RR+FD
Sbjct: 195 ATFASLLTAVEGPSCFLMH-QLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDG 253
Query: 118 MPN-KDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACG-HEKN 174
+ + +D +SWNA+L YT +G EA+ + MM++ G+ D SFTS S+C H +
Sbjct: 254 IGDIRDLISWNAMLGAYTHNG-MDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHD 312
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE---VTGDANKVFRRMHDRNVISWTTM 231
G+ IHG+ IK V N L++ Y++ + DA K F + ++ +SW +M
Sbjct: 313 DHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSM 372
Query: 232 ISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
++ + DA+ F+ M + V ++ F + + S +++ G+ IHGL I + F
Sbjct: 373 LTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGF 432
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S V + LI MY++ + D+ K F+E + WNA+I GYAQ+G + F
Sbjct: 433 ASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNE 492
Query: 347 VIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++ P + TF ++ + A + + + ++ K G+ + +D+YG+
Sbjct: 493 MLQRKAPLDHITFVGLITSCSHAGLVD-EGSEILNTMETKYGVPLRMEHYACGVDLYGRA 551
Query: 406 GSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G + +++++ + E W ++ A HG+ E
Sbjct: 552 GQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVE 587
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 217/645 (33%), Positives = 342/645 (53%), Gaps = 74/645 (11%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y++ L C + + +LH LI+K E ++ N LIT Y + G L A VFD +P
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 120 NKDSVSWNAILSGYTQDG----------------------------DYGV--EAILALIE 149
+ SWN ILS Y++ G +YG +A+
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 150 MMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
M++ + L+ ++F++ C + ++LG+QI+G +K G+G+ V VG+ L+ Y+K
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 209 VTGDANKVFRRMHDRNV-------------------------------ISWTTMIS---- 233
+ DA + F M +RNV ISWT MI+
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ RE A+ +F+EMRL G + TF ++ A + EG+ IH I+T+
Sbjct: 248 NGLERE-ALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVF 306
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + L+ MY++ S++ +E VF + + +ISW A++ GY QNG S AV+ FF + +
Sbjct: 307 VGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNG 366
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ +T GSV+++ A SL+ G + H + GL S V +AL+ +YGK GS
Sbjct: 367 VEPDDFTLGSVISS--CANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTEN 424
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S R+F E + E +WTA+++ A+ G + F+ M G++PD +TF+ VL+ C R
Sbjct: 425 SHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSR 484
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ KG F+SM+K++ I P DH +C++D+LGR GRLEEA + +P P +
Sbjct: 485 AGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWA 544
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL +CR+HG++E+G+ AD+L+ +EP SYVL+S+LYA KG W+ VA LR+GM+ K
Sbjct: 545 TLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKR 604
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
VRKE G+SW +H FS+ D + P +IY E L +M
Sbjct: 605 VRKEPGYSWIKYK--GKVHVFSADDQSSPFLGQIYAELEKLNYKM 647
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 151/484 (31%), Positives = 242/484 (50%), Gaps = 48/484 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----SDDALSFALRMNLIGVVFD 56
+++Y K G + IFN + D VSWN +SG+ SD + L + + +
Sbjct: 78 LSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLN 137
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T+ST L C G Q++ I+KFG S+V+VG+ L+ MY++ G + +A+R FD
Sbjct: 138 RITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFD 197
Query: 117 EMPNK-------------------------------DSVSWNAILSGYTQDGDYGVEAIL 145
EMP + DS+SW +++G Q+G EA+
Sbjct: 198 EMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG-LEREALD 256
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
EM G +D +F S +ACG L GKQIH I+ + +V VG+ L+ YS
Sbjct: 257 MFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYS 316
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIG 260
KC A VF+RM +NVISWT M+ + E+AV +F EM+ +GV P+D T
Sbjct: 317 KCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGS 376
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
+I + + ++EG H + + +S +V N LIT+Y + S ++S ++F E++ R+
Sbjct: 377 VISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRD 436
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRC 379
+SW AL++GYAQ G + + F ++ KP+ TF VL+A A + K Q
Sbjct: 437 EVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVE-KGLQYF 495
Query: 380 HSHIIKVGLDSDPIVG--SALLDMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALARH 436
S I + G+ PIV + ++D+ G+ G + E++ N + W ++S+ H
Sbjct: 496 ESMIKEHGI--MPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVH 553
Query: 437 GDYE 440
GD E
Sbjct: 554 GDME 557
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 211/632 (33%), Positives = 351/632 (55%), Gaps = 18/632 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDDAL---SFALRMNL---IGVVFDAVTYSTALSFCLD 69
+FN ++ PD+ +N ++ GF SD+ L S L +L + D TY+ A+S
Sbjct: 68 LFNKVSKPDLFLFNVLIRGF--SDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASR 125
Query: 70 HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAI 129
E G+ LH+ + G+ S ++VG+A++ +Y ++ R AR+VFD MP +D+V WN +
Sbjct: 126 LEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTM 185
Query: 130 LSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
+SG++++ Y ++I ++M+ GL D + + +A + LG I ++ K G
Sbjct: 186 ISGFSRNS-YFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKG 244
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFK 244
+ V V L+S YSKC + +F ++ ++IS+ MIS E AV+LF+
Sbjct: 245 LHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFR 304
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
E+ G N T +GLI N ++ R+I L +K + +PSV L T+Y R
Sbjct: 305 ELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLN 364
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNA 364
+Q + ++FDE + + SWNA+ISGY QNGL+ A+ F ++ + PN T S+L+A
Sbjct: 365 EVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSA 424
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+S+ G+ H I L+S+ V +AL+DMY K GSI E++++F+ +K+
Sbjct: 425 CAQLGALSI--GKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVV 482
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W A+I+ HG + + F EM G+ P +TFLS+L C +G++ +G +F SM
Sbjct: 483 TWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSM 542
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+Y +P +HY+CMVD+LGR G+L A E + ++P PG +V +LLGAC IH N EM
Sbjct: 543 ANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEM 602
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
+ L +++P G YVL+SN+Y+ ++ A +R+ +K + + K G + ++ D
Sbjct: 603 ANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDD 662
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ F+SGD +HP++ I+ M E L +M+
Sbjct: 663 QQ--YVFTSGDRSHPQATAIFEMLEKLTGKMR 692
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 227/450 (50%), Gaps = 13/450 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K + + A +F+ + D V WNT++SGF ++ +D++ + M +G+ FD+
Sbjct: 155 VDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDS 214
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +T L+ + + + G+ + L K GL S+VYV LI++YS+ G+ + R +FD+
Sbjct: 215 TTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQ 274
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ D +S+NA++SGYT + + A+ E++ G R++ + +L+L
Sbjct: 275 IDQPDLISYNAMISGYTFNHETE-SAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQL 333
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
+ I +S+K+G SV L + Y + A ++F ++++ SW MIS +
Sbjct: 334 SRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQ 393
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+SLF+EM + + PN VT ++ A + + G+ +HGL S V
Sbjct: 394 NGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYV 452
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
L+ MYA+ S+ ++ ++FD + + +++WNA+I+GY +G A++ F+ +++
Sbjct: 453 STALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGI 512
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P TF S+L A + +S + + HS G + ++D+ G+ G + +
Sbjct: 513 PPTGVTFLSILYACSHSGLVS-EGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNA 571
Query: 412 QRVFNETQ-EKSEFAWTAIISALARHGDYE 440
E W A++ A H + E
Sbjct: 572 LEFIERMPLEPGPAVWGALLGACMIHKNTE 601
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 219/645 (33%), Positives = 348/645 (53%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+ +Y ++G A +F+N+ D V WN +L+G+ K+ D A+ L M + ++
Sbjct: 100 IKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNS 159
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT++ LS C G QLH + V GL+ + V N L+ MYS+ L AR++FD
Sbjct: 160 VTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDT 219
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P D VSWN I+SGY Q+G G EA M+ G++ D ++F S +L+
Sbjct: 220 LPQSDLVSWNGIISGYVQNGLMG-EAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKH 278
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
K+IHG I+ V + + L+ Y KC A K + + + TTMIS +
Sbjct: 279 CKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVL 338
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++A+ F+ + + + P VTF + A + + G+ +HG IKT + V
Sbjct: 339 NGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHV 398
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
+ ++ MYA+ + + +VF+ ++ ++ I WN++I+ +QNG A+ F + E
Sbjct: 399 GSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEG- 457
Query: 353 PNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
Y S+ A+ A ++ +L +G+ H +IK L SD S+L+DMY K G++ S
Sbjct: 458 -TRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFS 516
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+RVF+ QEK+E +W +IISA HGD + + F EM G++PD +TFL +++ CG
Sbjct: 517 RRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHA 576
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + +G + M ++Y I +HY+C+ DM GR GRL EA E + +P P V +
Sbjct: 577 GQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGT 636
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGAC IHGNVE+ E + L ++P SG YVL++N+ A G W V +R MK +GV
Sbjct: 637 LLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGV 696
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
RK G+SW +V + H F + D +HP + +IY + + L E+K
Sbjct: 697 RKVPGYSWIEVN--NATHMFVAADGSHPLTAQIYSVLDSLLLELK 739
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 267/522 (51%), Gaps = 23/522 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAVT 59
MY ++G A +F L +WN ++ GF + + AL F L+M GV D T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ + C + G +H + GL +V+VG++LI +Y+ G L +A+ +FD +P
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
KDSV WN +L+GY ++GD G AI +EM ++ + V+F S C E L+LG
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSG-NAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
Q+HG+++ G V N L++ YSKC+ A K+F + +++SW +IS +
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNG 239
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A LF+ M G+ P+ +TF + ++ +K + IHG I+ + + + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI +Y + ++ ++K + S + + +ISGY NG + A++AF +++E KP
Sbjct: 300 ALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ TF S+ A ++L G+ H IIK LD VGSA+LDMY K G + + R
Sbjct: 360 TSVTFSSIFPAFAGLAALNL--GKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VFN EK W ++I++ +++G +N F++M +G R D ++ L+ C
Sbjct: 418 VFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPA 477
Query: 474 IHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRL 510
+H G+ + M+K D + E S ++DM + G L
Sbjct: 478 LHYGKEIHGLMIKGPLRSDLYAESS------LIDMYAKCGNL 513
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/631 (33%), Positives = 348/631 (55%), Gaps = 16/631 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGFE-----KSDDALSFALRMNLIGVVFDAVTYSTALSFCLDH 70
+FN ++ PD+ +N ++ GF KS L LR + D TY+ A+S
Sbjct: 68 LFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLR-KXTNLRPDNFTYAFAISAASRL 126
Query: 71 EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL 130
E G+ LH+ + G+ S ++VG+A++ +Y ++ R AR+VFD MP +D+V WN ++
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMI 186
Query: 131 SGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
SG++++ Y ++I ++M+ GL D + + +A + LG I ++ K G
Sbjct: 187 SGFSRNS-YFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGL 245
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKE 245
+ V V L+S YSKC + +F ++ ++IS+ MIS E AV+LF+E
Sbjct: 246 HSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRE 305
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
+ G N T +GLI N ++ R+I L +K + +PSV L T+Y R
Sbjct: 306 LLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNE 365
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAV 365
+Q + ++FDE + + SWNA+ISGY QNGL+ A+ F ++ + PN T S+L+A
Sbjct: 366 VQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSAC 425
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+S+ G+ H I L+S+ V +AL+DMY K GSI E++++F+ +K+
Sbjct: 426 AQLGALSI--GKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVT 483
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W A+I+ HG + + F EM G+ P +TFLS+L C +G++ +G +F SM
Sbjct: 484 WNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMA 543
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+Y +P +HY+CMVD+LGR G+L A E + ++P PG +V +LLGAC IH N EM
Sbjct: 544 NNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA 603
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
+ L +++P G YVL+SN+Y+ ++ A +R+ +K + + K G + ++ D
Sbjct: 604 NVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQ 663
Query: 606 DGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ F+SGD +HP++ I+ M E L +M+
Sbjct: 664 Q--YVFTSGDRSHPQATAIFEMLEKLTGKMR 692
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 227/450 (50%), Gaps = 13/450 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K + + A +F+ + D V WNT++SGF ++ +D++ + M +G+ FD+
Sbjct: 155 VDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDS 214
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +T L+ + + + G+ + L K GL S+VYV LI++YS+ G+ + R +FD+
Sbjct: 215 TTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQ 274
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ D +S+NA++SGYT + + A+ E++ G R++ + +L+L
Sbjct: 275 IDQPDLISYNAMISGYTFNHETE-SAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQL 333
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
+ I +S+K+G SV L + Y + A ++F ++++ SW MIS +
Sbjct: 334 SRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQ 393
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+SLF+EM + + PN VT ++ A + + G+ +HGL S V
Sbjct: 394 NGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYV 452
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
L+ MYA+ S+ ++ ++FD + + +++WNA+I+GY +G A++ F+ +++
Sbjct: 453 STALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGI 512
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P TF S+L A + +S + + HS G + ++D+ G+ G + +
Sbjct: 513 PPTGVTFLSILYACSHSGLVS-EGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNA 571
Query: 412 QRVFNETQ-EKSEFAWTAIISALARHGDYE 440
E W A++ A H + E
Sbjct: 572 LEFIERMPLEPGPAVWGALLGACMIHKNTE 601
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 222/637 (34%), Positives = 364/637 (57%), Gaps = 28/637 (4%)
Query: 21 NNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGL 77
N D+VSW+ ++S + EK+ +A+S M G + ++ C + E G
Sbjct: 3 NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62
Query: 78 QLHSLIVKFG-LDSEVYVGNALITMYSRW-GRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
+ ++K G +S+V VG ALI M+ + G L A +VFD MP+++ V+W +++ + Q
Sbjct: 63 IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
G + +A+ ++M+ G D + + SAC L LG+Q H + +K G V
Sbjct: 123 LG-FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVC 181
Query: 196 VGNVLMSTYSKCEVTG---DANKVFRRMHDRNVISWTTMIS-------MNREDAVSLFKE 245
VG L+ Y+KC G DA KVF RM NV+SWT +I+ +RE A+ LF E
Sbjct: 182 VGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDRE-AIELFLE 240
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
M V PN TF ++ A + + + G ++ L +K S V N LI+MY+R +
Sbjct: 241 MVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGN 300
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVIKESKP--NAYTFGSV 361
M+++ K FD L + ++S+N +++ YA+ SL + +AF F I+ + NA+TF S+
Sbjct: 301 MENARKAFDVLFEKNLVSYNTIVNAYAK---SLNSEEAFELFNEIEGAGTGVNAFTFASL 357
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L+ GA+ ++ G++ HS I+K G S+ + +AL+ MY + G+I + +VFNE +
Sbjct: 358 LS--GASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDG 415
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+ +WT++I+ A+HG + F +M GV P+ +T+++VL+ C G+I +G F
Sbjct: 416 NVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHF 475
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
SM ++ I P +HY+C+VD+LGR G LEEA ELV +P VL++ LGACR+HGN
Sbjct: 476 KSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGN 535
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
+++G+ A+ +++ +P +Y+L+SNL+A G WE VA +RK MK + + KE G SW +
Sbjct: 536 MDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIE 595
Query: 602 VGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
V + +H F GD +HP+++EIY + L ++K L
Sbjct: 596 VE--NKVHKFYVGDTSHPQAQEIYDELDQLALKIKEL 630
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 108/194 (55%), Gaps = 5/194 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY + G + A F+ L ++VS+NT+++ + K S++A + G +A
Sbjct: 292 ISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNA 351
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ LS G Q+HS I+K G S +++ NALI+MYSR G + A +VF+E
Sbjct: 352 FTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNE 411
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + + +SW ++++G+ + G + A+ +M+ G+ + V++ + SAC H +
Sbjct: 412 MGDGNVISWTSMITGFAKHG-FATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISE 470
Query: 178 GKQIHGVSIKMGYG 191
G + H S+K+ +G
Sbjct: 471 GLK-HFKSMKVEHG 483
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY + G + A +FN + + +++SW ++++GF K + AL +M GV +
Sbjct: 393 ISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNE 452
Query: 58 VTYSTALSFCLDHEGFLF-GLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VTY LS C H G + GL+ S+ V+ G+ + ++ + R G L EA +
Sbjct: 453 VTYIAVLSAC-SHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELV 511
Query: 116 DEMPNK 121
+ MP K
Sbjct: 512 NSMPFK 517
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/620 (33%), Positives = 346/620 (55%), Gaps = 17/620 (2%)
Query: 21 NNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGL 77
+NPD+ WN LS + D A+ + MN + + +DAVT L+ + G
Sbjct: 865 DNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGK 924
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H + VK GLDS+V V N+L+ MYS+ G AR VF++M + D +SWN+++S Q
Sbjct: 925 QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSS 984
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE-KNLELGKQIHGVSIKMGYGTHVSV 196
E++ I+++ +GL+ DH + S AC L + +QIH ++K G V
Sbjct: 985 -LEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFV 1043
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM-----ISMNREDAVSLFKEMRLDGV 251
L+ YSK +A +F+ D ++ W M I + + A+ LF + G
Sbjct: 1044 ATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGE 1103
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
+ +T A L+ +G+ IH IK F S+ V + ++ MY + M ++
Sbjct: 1104 KSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGI 1163
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAE 369
VF+ +S + ++W ++ISG NG A++ + +++S+ P+ YTF +++ A
Sbjct: 1164 VFNYISAPDDVAWTSMISGCVDNGNEDQALR-IYHRMRQSRVMPDEYTFATLIKASSCV- 1221
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+L+ G++ H+++IK+ SDP VG++L+DMY K G+I ++ R+F + ++ W A+
Sbjct: 1222 -TALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAM 1280
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
+ LA+HG+ E +N FK M++ G+ PD ++F+ +L+ C G+ + SM DY
Sbjct: 1281 LVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYG 1340
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
IEP +HYSC+VD LGR G ++EA++++ +P S+ ++LLGACRI G+VE G+R+A
Sbjct: 1341 IEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVA 1400
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
L +EP S +YVL+SN+YA W+ V RK MK K V+K+ GFSW DV ++ LH
Sbjct: 1401 ARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNM--LH 1458
Query: 610 GFSSGDNTHPRSEEIYRMAE 629
F D +HP+++ IY E
Sbjct: 1459 LFVVDDRSHPQADIIYDKVE 1478
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 249/567 (43%), Gaps = 53/567 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA----------LSFALRMNL 50
+ MY K G A +F+ D+V+WN +L + S D+ L LR +L
Sbjct: 663 LTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASL 722
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
+T + L CL+ +H +K GL+ +V+V AL+ +YS+ GR+ +
Sbjct: 723 GSTT--RMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRD 780
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFT---SAAS 167
AR +FD M +D V WN +L GY Q G EA E R GLR D S + S
Sbjct: 781 ARLLFDWMRERDVVLWNMMLKGYVQLG-LEKEAFQLFSEFHRSGLRPDEFSVQLILNGVS 839
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
++ L Q+ + K+ S+C GD +
Sbjct: 840 EVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGD--------------N 885
Query: 228 WTTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
W A+ F M + + VT + ++ A++ + ++ G+ +HG+ +K+
Sbjct: 886 WG---------AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLD 936
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S+ SV N L+ MY++ + +VF+++ ++ISWN++IS AQ+ L +V F +
Sbjct: 937 SDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDL 996
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ E KP+ +T SVL A + D L ++ H H +K G +D V + L+D+Y K G
Sbjct: 997 LHEGLKPDHFTLASVLRACSSLID-GLNISRQIHVHALKTGNIADSFVATTLIDVYSKSG 1055
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ E++ +F + W A++ D + + F + G + D IT +
Sbjct: 1056 KMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAK 1115
Query: 467 VCGRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
CG ++ +G+ + +K D H+ S ++DM + G + A + I
Sbjct: 1116 ACGCLVLLDQGKQIHAHAIKAGFDSDLHVN------SGILDMYIKCGDMVNAGIVFNYI- 1168
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERI 548
P S++ C +GN + RI
Sbjct: 1169 SAPDDVAWTSMISGCVDNGNEDQALRI 1195
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 220/465 (47%), Gaps = 41/465 (8%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
L + L G H+ IV G + ++ N L+TMYS+ G L AR+VFD P +D
Sbjct: 628 LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDL 687
Query: 124 VSWNAILSGYT---QDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLELGK 179
V+WNAIL Y D + L L ++R L ++ C + L +
Sbjct: 688 VTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAE 747
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN---- 235
+HG +IK+G V V L++ YSKC DA +F M +R+V+ W M+
Sbjct: 748 GVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLG 807
Query: 236 -REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
++A LF E G+ P++ + +++ +S N EG+ +L++
Sbjct: 808 LEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNW-DEGK----------WLADQ---- 852
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
+ YA S+ D ++ WN +S G + A++ F + +
Sbjct: 853 --VQAYAAKLSLSDDNP--------DVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDY 902
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+A T VL AV +D+ L G++ H +K GLDSD V ++L++MY K G + ++
Sbjct: 903 DAVTLLVVLAAVAGTDDLEL--GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFARE 960
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR--N 471
VFN+ + +W ++IS+ A+ E +N F ++ ++G++PD T SVL C +
Sbjct: 961 VFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLID 1020
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
G+ + R + LK +I S + ++D+ + G++EEAE L
Sbjct: 1021 GL-NISRQIHVHALKTGNIADSF-VATTLIDVYSKSGKMEEAEFL 1063
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G + A +F +N +I WN +L G + +++A++ M G+ D
Sbjct: 1250 VDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDR 1309
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
V++ LS C L E + + LHS+ +G++ E+ + L+ R G + EA +
Sbjct: 1310 VSFIGILSACSHAGLTSEAYEY---LHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADK 1366
Query: 114 VFDEMPNKDSVSWNAILSG 132
V + MP K S S N L G
Sbjct: 1367 VIETMPFKASASINRALLG 1385
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 206/649 (31%), Positives = 356/649 (54%), Gaps = 19/649 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKS----DDALSFALRMNLIGVVF 55
+N+Y F A +F + NP DI WN +++ K+ + F ++ +
Sbjct: 45 INLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKP 104
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
DA TY + L C +G +H+ ++K G +V V ++ + MY++ +A ++F
Sbjct: 105 DAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLF 164
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKN 174
DEMP +D SWN ++S Y QDG E L L E M+ G + D V+ T+ S+C +
Sbjct: 165 DEMPERDVASWNNVISCYYQDGQ--PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 222
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
LE GK+IH ++ G+ V + L+ Y KC A +VF ++ +NV+SW +MI+
Sbjct: 223 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAG 282
Query: 235 -----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + + LF+ M +G+ P T ++ A S ++ G+ IHG I+ ++
Sbjct: 283 YSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEAD 342
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + LI +Y + ++ +E VF + ++SWN +ISGY + G L A+ F + K
Sbjct: 343 IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK 402
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
KP+A TF SVL A ++ L+ G+ H+ II+ L+ + +V ALLDMY K G++
Sbjct: 403 AGVKPDAITFTSVLPA--CSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAV 460
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E+ +FN+ E+ +WT++I+A HG + F++M+ +PD +TFL++L+ C
Sbjct: 461 DEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSAC 520
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG-GPGLS 527
G++ +G + F+ M+ +Y +P+ +HYSC++D+LGRVGRL EA E++ + P +
Sbjct: 521 SHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVG 580
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+L +L AC +H +++GE+I L++ +P +Y+++SN+YA W+ V +R +K
Sbjct: 581 LLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIK 640
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G++K G SW +VG +H F D +HP+++ IY L S ++
Sbjct: 641 ELGLKKNPGCSWIEVG--KRIHPFVVEDKSHPQADMIYECMSILASHVE 687
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 150/317 (47%), Gaps = 44/317 (13%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL-SCREIISWNALIS 329
+K+G++IH + + ++C LI +Y Q ++ VF + + +I WN L++
Sbjct: 19 LKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMA 78
Query: 330 GYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
+N + + ++ F ++ KP+A+T+ SVL A + +G+ H+H+IK G
Sbjct: 79 ACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVG--YGKMVHTHVIKSG 136
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
D +V S+ + MY K ++ ++F+E E+ +W +IS + G E + F+
Sbjct: 137 FAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFE 196
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLG 505
EM+ G +PDS+T +V++ C R + +G+ + +++ + D + S +VDM G
Sbjct: 197 EMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGF---ALDGFVSSALVDMYG 253
Query: 506 RVGRLEEAEELVGQIPGG----------------------------------PGLSVLQS 531
+ G LE A+E+ QI P L+ L S
Sbjct: 254 KCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSS 313
Query: 532 LLGACRIHGNVEMGERI 548
+L AC N+++G+ I
Sbjct: 314 ILMACSRSVNLQLGKFI 330
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 347/632 (54%), Gaps = 15/632 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVT 59
MY G +A +F+ + + WN +++ KS D ++ +M GV D+ T
Sbjct: 138 MYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+S G QLH I+K G VGN+L+ Y + R+ AR+VFDEM
Sbjct: 198 FSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMT 257
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D +SWN+I++GY +G + + ++M+ G+ +D + S + C + + LG+
Sbjct: 258 ERDVISWNSIINGYVSNG-LAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNRE- 237
+H +K + N L+ YSKC A VFR M R+V+S+T+MI+ RE
Sbjct: 317 AVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREG 376
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+AV LF+EM +G+ P+ T +++ + L+ EG+ +H + + + V N
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSN 436
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-- 352
L+ MYA+ SM+++E VF E+ ++IISWN +I GY++N + A+ F ++ E +
Sbjct: 437 ALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFS 496
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ T VL A + + G+ H +I++ G SD V ++L+DMY K G++ ++
Sbjct: 497 PDERTVACVLPACASLS--AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAR 554
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F++ K +WT +I+ HG + + F +M G+ PD I+F+S+L C +G
Sbjct: 555 LLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSG 614
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ +G F+ M + IEP+ +HY+C+VDML R G L +A + +P P ++ +L
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGAL 674
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L CRIH +V++ ER+A+ + ++EP +G YVLM+N+YAE WE V LRK + +G+R
Sbjct: 675 LCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLR 734
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
K G SW ++ ++ F +GD+++P +E+I
Sbjct: 735 KNPGCSWIEIK--GRVNIFVAGDSSNPETEKI 764
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/477 (29%), Positives = 238/477 (49%), Gaps = 21/477 (4%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T + L C D + G ++ + I G + +G+ L MY+ G L EA RVF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D++ + ++ WN +++ + GD+ +I +MM G+ +D +F+ + + +++
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFS-GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G+Q+HG +K G+G SVGN L++ Y K A KVF M +R+VISW ++I+
Sbjct: 212 NGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E +S+F +M G+ + T + + + L+ GR +H +K F E
Sbjct: 272 VSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSRED 331
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
CN L+ MY++ + ++ VF E+S R ++S+ ++I+GYA+ GL+ AV+ F + +E
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ YT +VLN A + L G+R H I + + D V +AL+DMY K GS+
Sbjct: 392 GISPDVYTVTAVLNC--CARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMR 449
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK-EMENKGVRPDSITFLSVLTVC 468
E++ VF+E + K +W +I +++ ++ F + K PD T VL C
Sbjct: 450 EAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPAC 509
Query: 469 GRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
KGR + +++ D H+ S +VDM + G L A L I
Sbjct: 510 ASLSAFDKGREIHGYIMRNGYFSDRHVANS------LVDMYAKCGALLLARLLFDDI 560
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 179/364 (49%), Gaps = 9/364 (2%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
+D + S C K+L+ GK++ G+ ++G+ L Y+ C +A++V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRV 151
Query: 217 FRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F ++ + W ++ S + ++ LFK+M GV + TF + + S V
Sbjct: 152 FDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
G +HG +K+ F SV N L+ Y + + + KVFDE++ R++ISWN++I+GY
Sbjct: 212 NGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 332 AQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
NGL+ + F ++ + + T SV + ISL G+ H +K
Sbjct: 272 VSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISL--GRAVHCFGVKACFSR 329
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
+ + LLDMY K G + ++ VF E +S ++T++I+ AR G + F+EME
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+G+ PD T +VL C RN ++ +G+ + + +K+ + + ++DM + G +
Sbjct: 390 EEGISPDVYTVTAVLNCCARNRLLDEGKRVHE-WIKENDMGFDIFVSNALMDMYAKCGSM 448
Query: 511 EEAE 514
EAE
Sbjct: 449 REAE 452
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 217/436 (49%), Gaps = 21/436 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G D A +F ++ +VS+ ++++G+ + + +A+ M G+ D
Sbjct: 338 LDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L+ C + G ++H I + + +++V NAL+ MY++ G + EA VF E
Sbjct: 398 YTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSE 457
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAI-LALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M KD +SWN ++ GY+++ Y EA+ L + ++ K D + AC +
Sbjct: 458 MRVKDIISWNTVIGGYSKNC-YANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFD 516
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G++IHG ++ GY + V N L+ Y+KC A +F + ++++SWT MI+
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYG 576
Query: 234 MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
M+ ++A++LF +MR G+ P++++F+ L++A S LV EG + ++ EP+
Sbjct: 577 MHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNI-MRHECKIEPT 635
Query: 292 VCN--CLITMYARFESMQDSEKVFDELSC-REIISWNALISG-YAQNGLSLAAVQAFFGV 347
V + C++ M AR ++ + + + + + W AL+ G + + LA A
Sbjct: 636 VEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVF 695
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
E + Y VL A AE + +R I + GL +P G + +++ G R +
Sbjct: 696 ELEPENTGYY---VLMANIYAEAEKWEEVKRLRKRIGQRGLRKNP--GCSWIEIKG-RVN 749
Query: 408 IFESQRVFNETQEKSE 423
IF + N EK E
Sbjct: 750 IFVAGDSSNPETEKIE 765
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGA 367
DS FD R + N + + ++G AV+ V + + T SVL
Sbjct: 52 DSITTFD----RSVTDANTQLRRFCESGNLKNAVK-LLHVSGKWDIDPRTLCSVLQL--C 104
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
A+ SLK G+ + I G D +GS L MY G + E+ RVF++ + + W
Sbjct: 105 ADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWN 164
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
+++ LA+ GD+ + FK+M + GV DS TF V
Sbjct: 165 ILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV 201
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 206/649 (31%), Positives = 356/649 (54%), Gaps = 19/649 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKS----DDALSFALRMNLIGVVF 55
+N+Y F A +F + NP DI WN +++ K+ + F ++ +
Sbjct: 237 INLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKP 296
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
DA TY + L C +G +H+ ++K G +V V ++ + MY++ +A ++F
Sbjct: 297 DAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLF 356
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKN 174
DEMP +D SWN ++S Y QDG E L L E M+ G + D V+ T+ S+C +
Sbjct: 357 DEMPERDVASWNNVISCYYQDGQ--PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 414
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
LE GK+IH ++ G+ V + L+ Y KC A +VF ++ +NV+SW +MI+
Sbjct: 415 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAG 474
Query: 235 -----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + + LF+ M +G+ P T ++ A S ++ G+ IHG I+ ++
Sbjct: 475 YSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEAD 534
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + LI +Y + ++ +E VF + ++SWN +ISGY + G L A+ F + K
Sbjct: 535 IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK 594
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
KP+A TF SVL A ++ L+ G+ H+ II+ L+ + +V ALLDMY K G++
Sbjct: 595 AGVKPDAITFTSVLPA--CSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAV 652
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E+ +FN+ E+ +WT++I+A HG + F++M+ +PD +TFL++L+ C
Sbjct: 653 DEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSAC 712
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG-GPGLS 527
G++ +G + F+ M+ +Y +P+ +HYSC++D+LGRVGRL EA E++ + P +
Sbjct: 713 SHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVG 772
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+L +L AC +H +++GE+I L++ +P +Y+++SN+YA W+ V +R +K
Sbjct: 773 LLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIK 832
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G++K G SW +VG +H F D +HP+++ IY L S ++
Sbjct: 833 ELGLKKNPGCSWIEVG--KRIHPFVVEDKSHPQADMIYECMSILASHVE 879
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 184/353 (52%), Gaps = 11/353 (3%)
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMISMN 235
LGK IH + +G ++++ L++ Y C + A VF+ + + ++ W +++
Sbjct: 213 LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAAC 272
Query: 236 REDAVSL------FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++ + + + + + P+ T+ ++ A S V G+M+H IK+ F +
Sbjct: 273 TKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMD 332
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-I 348
V + + MYA+ +D+ K+FDE+ R++ SWN +IS Y Q+G A++ F + +
Sbjct: 333 VVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKV 392
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
KP++ T +V+++ A + L+ G+ H +++ G D V SAL+DMYGK G +
Sbjct: 393 SGFKPDSVTLTTVISS--CARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCL 450
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ VF + Q K+ +W ++I+ + GD +S + F+ M+ +G+RP T S+L C
Sbjct: 451 EMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMAC 510
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
R+ + G+ + ++++ +E S ++D+ + G + AE + +P
Sbjct: 511 SRSVNLQLGKFIHGYIIRN-RVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP 562
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 210/650 (32%), Positives = 356/650 (54%), Gaps = 14/650 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
+Y G F A +F ++ D V++NT++SG + + AL M L G+ D VT
Sbjct: 188 LYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVT 247
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++ L+ C G QLHS ++K G+ + +L+ +Y + G + A +F+
Sbjct: 248 VASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGD 307
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ V WN +L Y Q D ++ +M G+ + ++ C +ELG+
Sbjct: 308 RTNVVLWNLMLVAYGQISDLA-KSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGE 366
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR--- 236
QIH +SIK G+ + + V VL+ YSK A K+ + R+V+SWT+MI+
Sbjct: 367 QIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHD 426
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
E+A++ FKEM+ GV P+++ A + +++G IH + + ++ S+ N
Sbjct: 427 FCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWN 486
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKP 353
L+ +YAR +++ +F E+ ++ I+WN LISG+ Q+ L A+ F + + +K
Sbjct: 487 TLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKY 546
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N +TF S ++A+ DI K G++ H +K G S+ V +AL+ +YGK GSI +++
Sbjct: 547 NVFTFISAISALANLADI--KQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKM 604
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F+E ++E +W II++ ++HG ++ F +M+ +G++P+ +TF+ VL C G+
Sbjct: 605 IFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGL 664
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ +G F SM Y + P PDHY+C+VD+LGR G+L+ A V ++P + ++LL
Sbjct: 665 VEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLL 724
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
AC++H N+E+GE A L+++EP S SYVL+SN YA G W +RK MK +G+RK
Sbjct: 725 SACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRK 784
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
E G SW +V + +H F GD HP S++IY+ L + + K+E
Sbjct: 785 EPGRSWIEVK--NAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQE 832
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 267/553 (48%), Gaps = 22/553 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K+G +A +F L++ D VSW +LSG+ +S +A +M+ V+
Sbjct: 85 IDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTP 144
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS C + F G +H+ + K SE +VGNALI +Y +G A RVF +
Sbjct: 145 YVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCD 204
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D V++N ++SG+ Q G +G A+ EM GLR D V+ S +AC +L+
Sbjct: 205 MLFCDRVTFNTLISGHAQCG-HGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQK 263
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GKQ+H +K G L+ Y KC A+ +F NV+ W M+
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQ 323
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + +F +M+ G+ PN T+ ++ + ++ G IH L IK F S+ V
Sbjct: 324 ISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYV 383
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
LI MY+++ + + K+ + L R+++SW ++I+GY Q+ A+ F KE +
Sbjct: 384 SGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF----KEMQ 439
Query: 353 -----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
P+ S +A + +++ G + H+ + G +D + + L+++Y + G
Sbjct: 440 DCGVWPDNIGLASAASACAGIK--AMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGR 497
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
E+ +F E + K E W +IS + Y+ + F +M G + + TF+S ++
Sbjct: 498 SEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISA 557
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
I +G+ + +K H + + + ++ + G+ G +E+A+ + ++ +S
Sbjct: 558 LANLADIKQGKQVHGRAVKTGHTSET-EVANALISLYGKCGSIEDAKMIFSEMSLRNEVS 616
Query: 528 VLQSLLGACRIHG 540
+++ +C HG
Sbjct: 617 -WNTIITSCSQHG 628
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 40/503 (7%)
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
L++H+ V GL ++ +GN LI +Y++ G + +AR+VF E+ ++D VSW A+LSGY Q
Sbjct: 63 LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQS 122
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G G EA +M + +S SAC K G+ IH K + + V
Sbjct: 123 G-LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFV 181
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGV 251
GN L++ Y A +VF M + +++ T+IS + E A+ +F EM+L G+
Sbjct: 182 GNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241
Query: 252 CPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKT----NFLSEPSVCNCLITMYARFESM 306
P+ VT L+ A S+G+L K G+ +H +K ++++E S L+ +Y + +
Sbjct: 242 RPDCVTVASLLAACASVGDLQK-GKQLHSYLLKAGMSFDYITEGS----LLDLYVKCGDI 296
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNA 364
+ + +F+ ++ WN ++ Y Q LA FG ++ + PN +T+ +L
Sbjct: 297 ETAHDIFNLGDRTNVVLWNLMLVAYGQIS-DLAKSFEIFGQMQATGIHPNQFTYPCILRT 355
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
I L G++ HS IK G +SD V L+DMY K G + +++++ +++
Sbjct: 356 CTCTGQIEL--GEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVV 413
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG-----RNGMIHKGRH 479
+WT++I+ +H E + FKEM++ GV PD+I S + C R G+ R
Sbjct: 414 SWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARV 473
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV--LQSLLGACR 537
D I ++ +V++ R GR EEA L +I ++ L S G R
Sbjct: 474 YVSGYAADISI------WNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSR 527
Query: 538 IHGNVEMGERIADALMKMEPAGS 560
++ M MKM AG+
Sbjct: 528 LYKQALM------VFMKMGQAGA 544
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 184/384 (47%), Gaps = 11/384 (2%)
Query: 142 EAILALIEMMRKGLR-LDHVSFTSAASAC-GHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
E IL+L+ R L T A AC G L +IH S+ G G +GN+
Sbjct: 24 EKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNL 83
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPN 254
L+ Y+K + A +VF+ + R+ +SW M+S + +A L+ +M V P
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPT 143
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
++ A + G L +GRMIH K F SE V N LI +Y F S + +E+VF
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFC 203
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISL 373
++ + +++N LISG+AQ G A+Q F + + +P+ T S+L A + D L
Sbjct: 204 DMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD--L 261
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
+ G++ HS+++K G+ D I +LLD+Y K G I + +FN + W ++ A
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
+ D F +M+ G+ P+ T+ +L C G I G + +K+ E
Sbjct: 322 GQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKN-GFESD 380
Query: 494 PDHYSCMVDMLGRVGRLEEAEELV 517
++DM + G L++A +++
Sbjct: 381 MYVSGVLIDMYSKYGCLDKARKIL 404
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 205/639 (32%), Positives = 352/639 (55%), Gaps = 46/639 (7%)
Query: 3 MYCKSGQFDKALC----IFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVF 55
+Y +SG D LC +F + ++ +WNT++ + + DD A RM IGV
Sbjct: 115 LYARSGCLDD-LCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCP 173
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T+++AL C G Q+HS ++ G + +VGNALI MY++ +VF
Sbjct: 174 DNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVF 233
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILAL-IEMMRKGLRLDHVSFTSAASACGHEKN 174
DEM ++ V+WN+I+S Q G + +L L ++ G++ D +FT+ + C +++N
Sbjct: 234 DEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRN 293
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
G+QIH I+ ++ V L+ YS+C A ++F RM +RN SW +MI
Sbjct: 294 DNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEG 353
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ ++A+ LFK+M+L+G+ P+ + ++ + + ++GR +H ++ E
Sbjct: 354 YQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEE 413
Query: 290 PSVCNCLITMYARFESMQDSEKVFDEL--SCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ L+ MYA+ SM + KV+D+ R WN++++GYA GL + F +
Sbjct: 414 GILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEM 473
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++ + + T +++N + ++ +AL+DMY K G
Sbjct: 474 LESDIEYDVLTMVTIVNLL---------------------------VLETALVDMYSKCG 506
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+I +++ VF+ K+ +W A+IS ++HG + + ++EM KG+ P+ +TFL++L+
Sbjct: 507 AITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILS 566
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G++ +G +F SM +DY+IE +HY+CMVD+LGR GRLE+A+E V ++P P +
Sbjct: 567 ACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEV 626
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
S +LLGACR+H +++MG A L +++P G YV+MSN+YA G W+ V +R+ M
Sbjct: 627 STWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMM 686
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
K KGV+K+ G SW ++ + F +G THP++EEIY
Sbjct: 687 KMKGVKKDPGVSWIEIN--SEIQIFHAGSKTHPKTEEIY 723
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 147/550 (26%), Positives = 273/550 (49%), Gaps = 36/550 (6%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWG---RLVEAR 112
+ + YS+ + C+D F G +H+ ++ G + + Y+ ++ +Y+R G L AR
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
++F+EMP ++ +WN ++ Y + DY +EA M++ G+ D+ +F SA CG
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDY-MEAWGIFDRMLKIGVCPDNFTFASALRVCGAL 188
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
++ + GKQ+H I G+ VGN L+ Y+KC+ KVF M +RN ++W ++I
Sbjct: 189 RSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSII 248
Query: 233 SMNRE-----DAVSLFKEMR--LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
S + DA+ LF M+ DG+ P+ TF L+ + +GR IH I+ N
Sbjct: 249 SAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN 308
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
V L+ MY+ + ++++F+ ++ R SWN++I GY QNG + A++ F
Sbjct: 309 ITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFK 368
Query: 346 GV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ + KP+ ++ S+L++ + D + G+ H+ I++ ++ + I+ L+DMY K
Sbjct: 369 QMQLNGIKPDCFSLSSMLSSCVSLSDS--QKGRELHNFIVRNTMEEEGILQVVLVDMYAK 426
Query: 405 RGSIFESQRVFNET--QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
GS+ + +V+++T ++++ W +I++ A G + N F EM + D +T +
Sbjct: 427 CGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMV 486
Query: 463 SVLTVC----------GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
+++ + + G I K R +FD+M + ++ M+ + G +E
Sbjct: 487 TIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVS-----WNAMISGYSKHGCSKE 541
Query: 513 AEELVGQIPGG---PGLSVLQSLLGACRIHGNVEMGERIADALMKME--PAGSGSYVLMS 567
A L ++P P ++L AC G VE G RI ++ + A + Y M
Sbjct: 542 ALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMV 601
Query: 568 NLYAEKGDWE 577
+L G E
Sbjct: 602 DLLGRAGRLE 611
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/549 (23%), Positives = 258/549 (46%), Gaps = 83/549 (15%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLI--GVVF 55
++MY K + L +F+ + + V+WN+++S F +DAL LRM G+
Sbjct: 217 IDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQP 276
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T++T L+ C + G Q+H+ +++ + + V L+ MYS GRL A+ +F
Sbjct: 277 DQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIF 336
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ M +++ SWN+++ GY Q+G+ EA+ +M G++ D S +S S+C +
Sbjct: 337 NRMAERNAYSWNSMIEGYQQNGE-TQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDS 395
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISWTTMIS 233
+ G+++H ++ + VL+ Y+KC A KV+ + DRN W ++++
Sbjct: 396 QKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILA 455
Query: 234 MN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
++++ + F EM +D+ + ++ ++I NL L ++T
Sbjct: 456 GYANKGLKKESFNHFLEM-----LESDIEY-DVLTMVTIVNL---------LVLET---- 496
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
L+ MY++ ++ + VFD ++ + I+SWNA+ISGY+++G S A+ + +
Sbjct: 497 ------ALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMP 550
Query: 349 KESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
K+ PN TF ++L+A H+ +++ GL
Sbjct: 551 KKGMYPNEVTFLAILSACS-------------HTGLVEEGL------------------R 579
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
IF S + + K+E +T ++ L R G E ++M + P+ T+ ++L
Sbjct: 580 IFTSMQEDYNIEAKAEH-YTCMVDLLGRAGRLEDAKEFVEKMP---IEPEVSTWGALLGA 635
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVGRLEEAEEL-----VGQIP 521
C + + GR + + ++P +P Y M ++ GR +E E++ + +
Sbjct: 636 CRVHKDMDMGRLAAQRL---FELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVK 692
Query: 522 GGPGLSVLQ 530
PG+S ++
Sbjct: 693 KDPGVSWIE 701
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 215/642 (33%), Positives = 359/642 (55%), Gaps = 22/642 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVFD 56
+N + + G D A IF + + + V+ N ++ G + + A F +L+ + +
Sbjct: 393 VNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSE 452
Query: 57 A--VTYSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARR 113
+ V ST F EG G ++H+ + + GL D+ + +GNAL+ MY + + A
Sbjct: 453 SLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACS 512
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VF MP+KD+VSWN+++SG + + EA+ M R G+ + S S S+C
Sbjct: 513 VFQLMPSKDTVSWNSMISGLDHNERFE-EAVSCFHTMKRNGMVPSNFSVISTLSSCSSLG 571
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L LG+QIHG K G VSV N L++ Y++ + + KVF +M + + +SW + I
Sbjct: 572 WLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIG 631
Query: 234 MNRE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ A+ F EM G PN VTFI ++ A+S +++ G IH L +K +
Sbjct: 632 ALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVA 691
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFG 346
+ ++ N L+ Y + E M+D E +F +S R+ +SWN++ISGY +G+ A+ +
Sbjct: 692 DDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWP 751
Query: 347 VIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++ K + +TF +VL+A + +L+ G H+ ++ L+SD +VGSAL+DMY K
Sbjct: 752 MMQRGQKLDGFTFATVLSACASVA--TLERGMEVHACAVRACLESDVVVGSALVDMYAKC 809
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G I + R F ++ ++W ++IS ARHG + + F M+ G PD +TF+ VL
Sbjct: 810 GKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVL 869
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ +G F SM + Y + P +H+SCMVD+LGR G +++ E+ + +P P
Sbjct: 870 SACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPN 929
Query: 526 LSVLQSLLGA-CRIHG-NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
+ + +++LGA CR +G N E+G+R A L+++EP + +YVL+SN++A G+WE V R
Sbjct: 930 ILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEAR 989
Query: 584 KGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
M+ V+K+ G SW ++ DG+H F +GD THP E+IY
Sbjct: 990 LAMRKAAVKKDAGCSWVNMK--DGVHLFVAGDQTHPEKEKIY 1029
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 273/548 (49%), Gaps = 36/548 (6%)
Query: 1 MNMYCK-SGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS-FAL--RMNLIGVVFD 56
M+MY SG D A +F+ + + V+WN+++S + + DA+S F L M + GV +
Sbjct: 285 MSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELN 344
Query: 57 A----------VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWG 106
VT + +L+ C G + Q+ + I K G ++YVG+AL+ ++R+G
Sbjct: 345 LRPNEYTLCSLVTAACSLADC----GLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYG 400
Query: 107 RLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA 166
+ A+ +F +M ++++V+ N ++ G + G EA E M+ + ++ S
Sbjct: 401 LMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQ-GEEAAKVFKE-MKDLVEINSESLVVLL 458
Query: 167 SACGHEKNLELGK----QIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
S NL+ GK ++H + G +S+GN L++ Y KC +A VF+ M
Sbjct: 459 STFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMP 518
Query: 222 DRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
++ +SW +MIS E+AVS F M+ +G+ P++ + I + + S + GR
Sbjct: 519 SKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQ 578
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
IHG K + SV N L+T+YA +S+ + +KVF ++ + +SWN+ I A+
Sbjct: 579 IHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEA 638
Query: 337 S-LAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
S L A++ F +++ +PN TF ++L AV + + L G + H+ I+K + D +
Sbjct: 639 SVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGL--GHQIHALILKYSVADDNAI 696
Query: 395 GSALLDMYGKRGSIFESQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+ALL YGK + + + +F+ E + E +W ++IS G M+ M +G
Sbjct: 697 ENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRG 756
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ D TF +VL+ C + +G + ++ +E S +VDM + G+++ A
Sbjct: 757 QKLDGFTFATVLSACASVATLERGMEVHACAVRAC-LESDVVVGSALVDMYAKCGKIDYA 815
Query: 514 EELVGQIP 521
+P
Sbjct: 816 SRFFELMP 823
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 146/542 (26%), Positives = 275/542 (50%), Gaps = 37/542 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N+Y + G A +F+ + ++VSW+ ++SG+ ++ D+A S + G++ +
Sbjct: 182 INIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNH 241
Query: 58 VTYSTALSFCLD--HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW-GRLVEARRV 114
+AL C G G+Q+H+ I K S++ + N L++MYS G + +A RV
Sbjct: 242 FAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRV 301
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLD-------HVSFTSAAS 167
FDE+ ++SV+WN+I+S Y + GD V A M +G+ L+ S +AA
Sbjct: 302 FDEIKFRNSVTWNSIISVYCRRGD-AVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAAC 360
Query: 168 A---CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
+ CG L L +Q+ K G+ + VG+ L++ +++ + A +F++M+DRN
Sbjct: 361 SLADCG----LVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRN 416
Query: 225 VISWT-TMISMNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM--- 276
++ M+ + R E+A +FKEM+ D V N + + L+ + + +KEG+
Sbjct: 417 AVTMNGLMVGLARQHQGEEAAKVFKEMK-DLVEINSESLVVLLSTFTEFSNLKEGKRKGQ 475
Query: 277 -IHGLCIKTNFL-SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
+H ++ + + S+ N L+ MY + ++ ++ VF + ++ +SWN++ISG N
Sbjct: 476 EVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHN 535
Query: 335 GLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
AV F + + P+ ++ S L++ + ++L G++ H K GLD D
Sbjct: 536 ERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTL--GRQIHGEGFKWGLDLDVS 593
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH-GDYESVMNQFKEMENK 452
V +ALL +Y + SI E Q+VF + E + +W + I ALA++ + F EM
Sbjct: 594 VSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQA 653
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
G RP+ +TF+++L ++ G + +LK Y + + ++ G+ ++E+
Sbjct: 654 GWRPNRVTFINILAAVSSFSVLGLGHQIHALILK-YSVADDNAIENALLAFYGKCEQMED 712
Query: 513 AE 514
E
Sbjct: 713 CE 714
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 242/476 (50%), Gaps = 22/476 (4%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
LH + K G +V+ N LI +Y R G LV AR++FDEMP K+ VSW+ ++SGYTQ+
Sbjct: 161 HLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQN- 219
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGH--EKNLELGKQIHGVSIKMGYGTHVS 195
EA ++ GL +H + SA AC ++LG QIH K+ + +
Sbjct: 220 RMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMI 279
Query: 196 VGNVLMSTYSKCEVT-GDANKVFRRMHDRNVISWTTMISM--NREDAVS---LFKEMRLD 249
+ NVLMS YS C + DA++VF + RN ++W ++IS+ R DAVS LF M+++
Sbjct: 280 LSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQME 339
Query: 250 GV----CPNDVTFIGLIHA---ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
GV PN+ T L+ A ++ LV +M+ + K+ FL + V + L+ +AR
Sbjct: 340 GVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRI-EKSGFLRDLYVGSALVNGFAR 398
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVL 362
+ M ++ +F ++ R ++ N L+ G A+ A + F + + N+ + +L
Sbjct: 399 YGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLL 458
Query: 363 NAVGAAEDIS--LKHGQRCHSHIIKVGL-DSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
+ ++ + GQ H+++ + GL D+ +G+AL++MYGK +I + VF
Sbjct: 459 STFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMP 518
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
K +W ++IS L + +E ++ F M+ G+ P + + +S L+ C G + GR
Sbjct: 519 SKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQ 578
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
+ K + ++ + ++ + + E +++ Q+P +S S +GA
Sbjct: 579 IHGEGFK-WGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVS-WNSFIGA 632
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 50/101 (49%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SL H + K G D + L+++Y + G++ ++++F+E +K+ +W+ +IS
Sbjct: 155 SLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLIS 214
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
++ + + FK + + G+ P+ S L C + G
Sbjct: 215 GYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG 255
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 219/651 (33%), Positives = 359/651 (55%), Gaps = 26/651 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG------FEKSDDALSFALRMNLIGVV 54
+N Y G A F+ + D+ +WN+++S F + D + L + +
Sbjct: 82 INRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQS- 140
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D T+ + C + + G ++H L++K G + +VY+ + I YSR+G + A +
Sbjct: 141 -DHYTFPPVIRACGNLDD---GRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNL 196
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD M +D +WNA++SG+ +G EA+ EM K + +D V+ +S C +
Sbjct: 197 FDNMMIRDIGTWNAMISGFYLNGKVA-EALEVFDEMRFKSVSMDSVTISSLLPICVQLDD 255
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
+ G IH +IK+G + V N L++ Y+K A +F +M R+++SW ++++
Sbjct: 256 IISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAA 315
Query: 234 --MNREDAVSL--FKEMRLDGVCPNDVTFIGLIH-AISIGNLVKEGRMIHGLCIKTN-FL 287
N++ ++L + +M GV P+ +T + L A +GN + R IHG + FL
Sbjct: 316 FEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFL-SSRSIHGFVTRRCWFL 374
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ ++ N +I MYA+ + + KVF+ L +++ISWN+LI+GY+QNGL+ A+ + +
Sbjct: 375 HDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSM 434
Query: 348 IKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
S PN T+ S+L A ++ +LK G + H +IK L D V + L+DMYGK
Sbjct: 435 RYYSGAVPNQGTWVSILTA--HSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKC 492
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++ +F E +S +W AIIS HG + FKEM+++GV+PD ITF+S+L
Sbjct: 493 GKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLL 552
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C +G++ +G+ F M + Y I PS HY CMVD+ GR G LE+A V +P P
Sbjct: 553 SACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPD 612
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+SV +LLGACRIH NVE+ ++D L+K+E G YVL+SN+YA+ G WE V +R
Sbjct: 613 VSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSL 672
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ +G++K G W+ + + F +G+ THP+ EEIY L ++MK
Sbjct: 673 ARDRGLKKTPG--WSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMK 721
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 234/463 (50%), Gaps = 24/463 (5%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLH+L+V G +++ LI Y+ G + AR FD++ KD +WN+++S Y + G
Sbjct: 61 QLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIG 120
Query: 138 DYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
+ A+ E + L+ DH +F ACG NL+ G+++H + +K+G+ V +
Sbjct: 121 HFHA-AVDCFNEFLSTSFLQSDHYTFPPVIRACG---NLDDGRKVHCLVLKLGFECDVYI 176
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRE--DAVSLFKEMRLDGV 251
+ YS+ A +F M R++ +W MIS +N + +A+ +F EMR V
Sbjct: 177 AASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSV 236
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
+ VT L+ + + G +IH IK + VCN LI MYA+F ++ +E
Sbjct: 237 SMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAET 296
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGVIKESKPNAYTFGSVLNAVG 366
+F+++ R+I+SWN+L++ + QN + A+ + GV+ P+ T S+ A
Sbjct: 297 IFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVV----PDLLTLVSL--ASV 350
Query: 367 AAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
AAE + + H + + D +G+A++DMY K G I +++VF K +
Sbjct: 351 AAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVIS 410
Query: 426 WTAIISALARHGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W ++I+ +++G ++ + M G P+ T++S+LT + G + +G +
Sbjct: 411 WNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQL 470
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
+K++ + +C+VDM G+ G+L +A L ++P +S
Sbjct: 471 IKNF-LYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVS 512
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 169/354 (47%), Gaps = 12/354 (3%)
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
+ L KQ+H + + G + + L++ Y+ A F ++ ++V +W +MIS
Sbjct: 56 VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115
Query: 235 -----NREDAVSLFKEMRLDGVCPND-VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ AV F E +D TF +I A GNL +GR +H L +K F
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRA--CGNL-DDGRKVHCLVLKLGFEC 172
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV- 347
+ + I Y+RF + + +FD + R+I +WNA+ISG+ NG A++ F +
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMR 232
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
K ++ T S+L +DI G H + IK+GL+ D V +AL++MY K G
Sbjct: 233 FKSVSMDSVTISSLLPICVQLDDII--SGVLIHVYAIKLGLEFDLFVCNALINMYAKFGE 290
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ +FN+ + + +W ++++A ++ + + +M + GV PD +T +S+ +V
Sbjct: 291 LRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASV 350
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
G R + + + + ++DM ++G ++ A ++ +P
Sbjct: 351 AAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLP 404
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 207/634 (32%), Positives = 343/634 (54%), Gaps = 14/634 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDA 57
+++Y K G+ A +F + + VSWN +L+GF + DA L+ RM + F
Sbjct: 271 VDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSK 330
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ST L C + G +HSL ++ G + + ++ L+ MYS+ G +A +VF
Sbjct: 331 FTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVR 390
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ + D VSW+AI++ Q G EA M G+ + + S SA +L
Sbjct: 391 IEDPDVVSWSAIITCLDQKGQ-SREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYY 449
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+ IH K G+ +V N L++ Y K D +VF +R++ISW ++S +
Sbjct: 450 GESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHD 509
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + +F +M +G PN TFI ++ + S + V G+ +H +K + V
Sbjct: 510 NETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFV 569
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
L+ MYA+ ++D+E +F+ L R++ +W +++GYAQ+G AV+ F + +E
Sbjct: 570 GTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGV 629
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN +T S L+ G + +L G++ HS IK G D V SAL+DMY K G + ++
Sbjct: 630 KPNEFTLASSLS--GCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA 687
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VF+ + +W II ++HG + F+ M ++G PD +TF+ VL+ C
Sbjct: 688 EVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHM 747
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G+I +G+ F+S+ K Y I P+ +HY+CMVD+LGR G+ E E + ++ + + ++
Sbjct: 748 GLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWET 807
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
+LGAC++HGN+E GER A L ++EP +Y+L+SN++A KG W+ V +R M ++GV
Sbjct: 808 VLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGV 867
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+KE G SW +V +H F S D +HP+ EI+
Sbjct: 868 KKEPGCSWVEVN--GQVHVFLSHDGSHPKIREIH 899
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 293/530 (55%), Gaps = 27/530 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N+Y K G + A +F + D+VSW +++GF A++ M GV +
Sbjct: 170 VNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANE 229
Query: 58 VTYSTAL---SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
TY+TAL S CLD E FG Q+H+ +K G S+++VG+AL+ +Y++ G +V A RV
Sbjct: 230 FTYATALKACSMCLDLE---FGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERV 286
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEK 173
F MP +++VSWNA+L+G+ Q GD E +L L M + + ++ C +
Sbjct: 287 FLCMPKQNAVSWNALLNGFAQMGD--AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSG 344
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
NL G+ +H ++I++G + L+ YSKC + GDA KVF R+ D +V+SW+ +I+
Sbjct: 345 NLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIIT 404
Query: 234 M-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFL 287
+A +FK MR GV PN T L+ A + +G+L G IH K F
Sbjct: 405 CLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYY-GESIHACVCKYGFE 463
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ +VCN L+TMY + S+QD +VF+ + R++ISWNAL+SG+ N ++ F +
Sbjct: 464 YDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQM 523
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ E PN YTF S+L + + D+ L G++ H+ I+K LD + VG+AL+DMY K
Sbjct: 524 LAEGFNPNMYTFISILRSCSSLSDVDL--GKQVHAQIVKNSLDGNDFVGTALVDMYAKNR 581
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ +++ +FN ++ FAWT I++ A+ G E + F +M+ +GV+P+ T S L+
Sbjct: 582 FLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLS 641
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAE 514
C R + GR L +K S D + S +VDM + G +E+AE
Sbjct: 642 GCSRIATLDSGRQLHSMAIKAGQ---SGDMFVASALVDMYAKCGCVEDAE 688
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 244/472 (51%), Gaps = 20/472 (4%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
YS L C G +H ++K G++ + ++ N+L+ +Y++ G A +VF E+P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D VSW A+++G+ +G YG A+ EM R+G+ + ++ +A AC +LE GK
Sbjct: 191 ERDVVSWTALITGFVAEG-YGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGK 249
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----M 234
Q+H +IK+G + + VG+ L+ Y+KC A +VF M +N +SW +++
Sbjct: 250 QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMG 309
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+ E ++LF M + + T ++ + ++ G+++H L I+ + +
Sbjct: 310 DAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISC 369
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGVIK 349
CL+ MY++ D+ KVF + +++SW+A+I+ Q G S A + F GVI
Sbjct: 370 CLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVI- 428
Query: 350 ESKPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
PN +T S+ V AA D+ L +G+ H+ + K G + D V +AL+ MY K GS+
Sbjct: 429 ---PNQFTLASL---VSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSV 482
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ RVF T + +W A++S + ++ + F +M +G P+ TF+S+L C
Sbjct: 483 QDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSC 542
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ G+ + ++K+ ++ + + +VDM + LE+AE + ++
Sbjct: 543 SSLSDVDLGKQVHAQIVKN-SLDGNDFVGTALVDMYAKNRFLEDAETIFNRL 593
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 7/184 (3%)
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
G+ +SK + +L + D L G+ H +IK G++ D + ++L+++Y K
Sbjct: 119 GLDFDSKGRLRQYSGMLRTCASKGD--LNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKC 176
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GS + +VF E E+ +WTA+I+ G +N F EM +GV + T+ + L
Sbjct: 177 GSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATAL 236
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPGG 523
C + G+ + +K + D + S +VD+ + G + AE + +P
Sbjct: 237 KACSMCLDLEFGKQVHAEAIK---VGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQ 293
Query: 524 PGLS 527
+S
Sbjct: 294 NAVS 297
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 216/629 (34%), Positives = 334/629 (53%), Gaps = 78/629 (12%)
Query: 91 EVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS---------------GYTQ 135
E ++ N L++ Y+R G L +ARRVFD MP++++ S+NA+LS G
Sbjct: 49 ETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIP 108
Query: 136 DGDY---------------GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
D D G +A+ L M L+ SF SA SAC EK G+Q
Sbjct: 109 DPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQ 168
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE--- 237
+H + K +G+ V +G L+ Y+KCE +A KVF M +RN++SW ++I+ +
Sbjct: 169 VHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGP 228
Query: 238 --DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN- 294
+A++LF M DG P++VT ++ A + +EGR +H +K++ E V N
Sbjct: 229 VDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNN 288
Query: 295 CLITMYARFESMQDSEKVFDELSCREIIS------------------------------- 323
L+ MYA+ +++ VFD ++ R ++S
Sbjct: 289 ALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVA 348
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
WN LI+ YA N A++ F + +ES P YT+G+VLNA ++ L GQ+ H H
Sbjct: 349 WNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQL--GQQAHVH 406
Query: 383 IIKVGL------DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
++K G +SD VG++L+DMY K GSI + +VF + +W A+I A++
Sbjct: 407 VLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQN 466
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
G + + F+ M RPDS+T + VL+ CG +G++ +GR F SM +D+ I P+ DH
Sbjct: 467 GRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDH 526
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
Y+CM+D+LGR G L+E EEL+ +P P + SLLGACR+H N++MGE A L +++
Sbjct: 527 YTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELD 586
Query: 557 PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDN 616
P SG YVL+SN+YAE G W V +R+ MK +GV K+ G SW ++G ++ F + DN
Sbjct: 587 PDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIEIG--RKVNVFLARDN 644
Query: 617 THPRSEEIYRMAECLGSEMKYLNSKRERA 645
HP EI+ + +M ++ E A
Sbjct: 645 IHPCRNEIHDTLRIIQMQMSRMSIDAEIA 673
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 238/482 (49%), Gaps = 52/482 (10%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAVTYSTAL 64
G+ D AL +F + +PD S+N V++ + DAL F M+ V +A ++++AL
Sbjct: 95 GRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASAL 154
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
S C + G Q+H+L+ K S+VY+G AL+ MY++ R EA++VFD MP ++ V
Sbjct: 155 SACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIV 214
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
SWN++++ Y Q+G EA+ + MM+ G D V+ S SAC G+Q+H
Sbjct: 215 SWNSLITCYEQNGPVD-EALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTR 273
Query: 185 SIKMG-YGTHVSVGNVLMSTYSKCEVT-------------------------------GD 212
+K + + + N L+ Y+KC T GD
Sbjct: 274 MVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGD 333
Query: 213 ANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISI 267
A VF +M ++NV++W +I+ E+A+ LF ++ + V P T+ +++A +
Sbjct: 334 AQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACAN 393
Query: 268 GNLVKEGRMIHGLCIKTNFL------SEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
++ G+ H +K F S+ V N L+ MY + S+ D KVF+ ++ R+
Sbjct: 394 LANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDN 453
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
+SWNA+I GYAQNG + A+ F ++ +P++ T VL+A G + + K G+R
Sbjct: 454 VSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLV--KEGRRYF 511
Query: 381 SHIIKV-GLDSDPIVGSALLDMYGKRGSIFESQRVF-NETQEKSEFAWTAIISALARHGD 438
+ + G+ + ++D+ G+ G + E + + N E W +++ A H +
Sbjct: 512 QSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKN 571
Query: 439 YE 440
+
Sbjct: 572 ID 573
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 178/375 (47%), Gaps = 47/375 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K + ++A +F+ + +IVSWN++++ +E++ D+AL+ +RM G V D
Sbjct: 189 VDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDE 248
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT ++ +S C G Q+H+ +VK ++ + NAL+ MY++ GR EA+ VFD
Sbjct: 249 VTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFD 308
Query: 117 EMPNKDSVSWNAILSGYTQDGDYG------------------------------VEAILA 146
M + VS ++++GY + + G EA+
Sbjct: 309 RMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRL 368
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH------GVSIKMGYGTHVSVGNVL 200
+ + R+ + H ++ + +AC + NL+LG+Q H G G + V VGN L
Sbjct: 369 FVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSL 428
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPND 255
+ Y K D KVF RM R+ +SW MI + +DA+ LF+ M P+
Sbjct: 429 VDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDS 488
Query: 256 VTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
VT IG++ A LVKEG R + + C+I + R +++ E++ +
Sbjct: 489 VTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIE 548
Query: 315 ELSCR-EIISWNALI 328
+ + + W +L+
Sbjct: 549 NMPMEPDAVLWASLL 563
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 36/264 (13%)
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ F E + N L++ YAR S+ D+ +VFD + R S+NAL+S A+ G + A+ A
Sbjct: 44 SPFAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDAL-A 102
Query: 344 FFGVIKESKP---------------------------------NAYTFGSVLNAVGAAED 370
FG I + NAY+F S L+A A +
Sbjct: 103 LFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSAC--ASE 160
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+ + G++ H+ + K SD +G+AL+DMY K E+Q+VF+ E++ +W ++I
Sbjct: 161 KASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLI 220
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
+ ++G + + F M G PD +T SV++ C +GR + M+K
Sbjct: 221 TCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRF 280
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAE 514
+ +VDM + GR EA+
Sbjct: 281 REDMVLNNALVDMYAKCGRTWEAK 304
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 204/636 (32%), Positives = 355/636 (55%), Gaps = 22/636 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F + + WNT+L + ++ L M D T AL C +
Sbjct: 16 MFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELRE 75
Query: 73 FLFGLQLHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
+G +H + K L S++YVG++LI MY + GR++EA R+FDE+ D V+W++++S
Sbjct: 76 VNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVS 135
Query: 132 GYTQDGD--YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
G+ ++G VE ++ M + D V+ + SAC N LG+ +HG I+ G
Sbjct: 136 GFEKNGSPYQAVEFFRRMV--MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRG 193
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFK 244
+ +S+ N L++ Y+K +A +F+ + +++VISW+T+I+ + +A+ +F
Sbjct: 194 FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFN 253
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
+M DG PN T + ++ A + + +++GR H L I+ +E V L+ MY +
Sbjct: 254 DMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCF 313
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVL 362
S +++ VF + ++++SW ALISG+ NG++ +++ F ++ E ++P+A VL
Sbjct: 314 SPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVL 373
Query: 363 NAVGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
G+ ++ +C HS++IK G DS+P +G++L+++Y + GS+ + +VFN K
Sbjct: 374 ---GSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK 430
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
WT++I+ HG + F M ++ V+P+ +TFLS+L+ C G+IH+G +
Sbjct: 431 DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
F M+ DY + P+ +HY+ +VD+LGRVG L+ A E+ ++P P +L +LLGACRIH
Sbjct: 491 FKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQ 550
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
N EM E +A L ++E +G Y+LMSN+Y KG+WE V LR +K +G++K + S
Sbjct: 551 NGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLI 610
Query: 601 DVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++ +H F + D HP E +Y + + L MK
Sbjct: 611 EIR--RKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 227/443 (51%), Gaps = 16/443 (3%)
Query: 109 VEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASA 168
V+AR++F EM + WN +L +++ + E + M R + D+ + A A
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWE-EVLYHFSHMFRDEEKPDNFTLPVALKA 69
Query: 169 CGHEKNLELGKQIHG-VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
CG + + G+ IHG V + G+ + VG+ L+ Y KC +A ++F + ++++
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 228 WTTMISMNRED-----AVSLFKEMRL-DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
W++M+S ++ AV F+ M + V P+ VT I L+ A + + + GR +HG
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
I+ F ++ S+ N L+ YA+ + +++ +F ++ +++ISW+ +I+ Y QNG + A+
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 342 QAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
F ++ + ++PN T VL A AA D L+ G++ H I+ GL+++ V +AL+D
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHD--LEQGRKTHELAIRKGLETEVKVSTALVD 307
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM--ENKGVRPDS 458
MY K S E+ VF+ K +W A+IS +G + +F M EN RPD+
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN-NTRPDA 366
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
I + VL C G + + + F S + Y + +P + +V++ R G L A ++
Sbjct: 367 ILMVKVLGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 425
Query: 519 QIPGGPGLSVLQSLLGACRIHGN 541
I + V SL+ IHG
Sbjct: 426 GIALKDTV-VWTSLITGYGIHGK 447
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 199/378 (52%), Gaps = 13/378 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIG-VVFDAV 58
MY K G+ +AL +F+ L PDIV+W++++SGFEK+ A+ F RM + V D V
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 164
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T T +S C G +H +++ G +++ + N+L+ Y++ EA +F +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
KD +SW+ +++ Y Q+G EA+L +MM G + + AC +LE G
Sbjct: 225 AEKDVISWSTVIACYVQNGA-AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG 283
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MN 235
++ H ++I+ G T V V L+ Y KC +A VF R+ ++V+SW +IS +N
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN 343
Query: 236 --REDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++ F M L+ P+ + + ++ + S +++ + H IK F S P +
Sbjct: 344 GMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI 403
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK--E 350
L+ +Y+R S+ ++ KVF+ ++ ++ + W +LI+GY +G A++ F ++K E
Sbjct: 404 GASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSE 463
Query: 351 SKPNAYTFGSVLNAVGAA 368
KPN TF S+L+A A
Sbjct: 464 VKPNEVTFLSILSACSHA 481
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 9/291 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+N Y KS F +A+ +F + D++SW+TV++ + ++ A L N + G +
Sbjct: 205 LNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNV 264
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T L C G + H L ++ GL++EV V AL+ MY + EA VF
Sbjct: 265 ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSR 324
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P KD VSW A++SG+T +G I ++ R D + +C LE
Sbjct: 325 IPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQ 384
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
K H IK G+ ++ +G L+ YS+C G+A+KVF + ++ + WT++I+
Sbjct: 385 AKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGI 444
Query: 234 -MNREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
A+ F M + V PN+VTF+ ++ A S L+ EG I L +
Sbjct: 445 HGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMV 495
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K S +++++F E ++S + W ++ +L+R +E V+ F M +PD+ T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
L CG ++ G + + KD + D Y S ++ M + GR+ EA + ++
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKD--VTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL 122
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 213/635 (33%), Positives = 350/635 (55%), Gaps = 16/635 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ +Y +G + A F+ + + D V WN +++G+ + SD A+ M D+
Sbjct: 52 IKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDS 111
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT++ LS +G QLH L+V+ GLD VGN L+T+YS+ +L +AR++FD
Sbjct: 112 VTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDM 171
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D V WN ++ GY Q+G + +A + EM+ G++ D ++FTS + +L+
Sbjct: 172 MPQIDLVVWNRMIGGYVQNG-FMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQ 230
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
K+IHG ++ G V + + L+ Y KC A K+F +++ +T MIS
Sbjct: 231 IKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVL 290
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
MN+ DA+ +F+ + + PN +TF ++ A + +K GR +HG IK +
Sbjct: 291 NGMNK-DALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCP 349
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + ++ MYA+ + + +F +S ++ I WN++I+ ++Q+G A+ F + E
Sbjct: 350 VGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEG 409
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
K + T + L+A A +L +G+ H +IK +SD SAL++MY K G +
Sbjct: 410 VKYDCVTVSAALSA--CANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNI 467
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VFN QEK+E AW +II+A HG + F M +G++PD ITFL++L+ CG
Sbjct: 468 ARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGH 527
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G + G F M ++Y I +HY+CM D+ GR G L+EA E++ +P P SV
Sbjct: 528 AGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWG 587
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGACR+HGNVE+ E + L+ +EP SG Y+L++++ A+ G W V ++ MK +G
Sbjct: 588 TLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERG 647
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
V+K G SW +V + + F + D +HP S +IY
Sbjct: 648 VQKVPGCSWIEVNNTTCV--FFAADGSHPESPQIY 680
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 243/469 (51%), Gaps = 10/469 (2%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
GV D T+ + C G + +I++ G D +++V ++LI +Y+ G + +A
Sbjct: 5 GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
RR FD+M +KD V WN +++GY Q G+ AI +MM + D V+F S
Sbjct: 65 RRFFDKMIDKDCVLWNVMINGYVQCGESD-SAIKLFKDMMSSEAKPDSVTFACVLSISCS 123
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
E +E G+Q+HG+ ++ G VGN L++ YSK GDA K+F M +++ W M
Sbjct: 124 EAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRM 183
Query: 232 I-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I + +DA LF EM G+ P+ +TF + +++ + +K+ + IHG ++
Sbjct: 184 IGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGV 243
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ + + + LI +Y + + K+F+ + +I+ + A+ISGY NG++ A++ F
Sbjct: 244 ILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRW 303
Query: 347 VI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ K+ PNA TF S+L A I L G+ H +IIK L+ VGSA+++MY K
Sbjct: 304 LLQKKMIPNALTFSSILPACAGLAAIKL--GRELHGYIIKNELEEKCPVGSAIMNMYAKC 361
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + + +F K W +II++ ++ G E + F++M +GV+ D +T + L
Sbjct: 362 GRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAAL 421
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
+ C +H G+ + M+K E S +++M + G+L A
Sbjct: 422 SACANIPALHYGKEIHGFMIKG-AFESDLFDMSALINMYAKCGKLNIAR 469
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 192/377 (50%), Gaps = 9/377 (2%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M+ G+ D +F C N+ LGK I + ++MG+ + V + L+ Y+
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 210 TGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
DA + F +M D++ + W MI+ + A+ LFK+M P+ VTF ++
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+V+ GR +HGL +++ P V N L+T+Y++ + D+ K+FD + +++ W
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
N +I GY QNG A F +I KP++ TF S L ++ AE SLK + H +I
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSL--AESSSLKQIKEIHGYI 238
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
++ G+ D + SAL+D+Y K + ++FN + + +TA+IS +G + +
Sbjct: 239 VRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDAL 298
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
F+ + K + P+++TF S+L C I GR L ++K+ E P S +++M
Sbjct: 299 EIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVG-SAIMNM 357
Query: 504 LGRVGRLEEAEELVGQI 520
+ GRL+ A + G+I
Sbjct: 358 YAKCGRLDLAHLIFGRI 374
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ YTF V+ ++ L G+ I+++G D D V S+L+ +Y G I +++
Sbjct: 8 PDKYTFPPVIKCCTGLNNVRL--GKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDAR 65
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
R F++ +K W +I+ + G+ +S + FK+M + +PDS+TF VL++
Sbjct: 66 RFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEA 125
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
M+ GR L +++ ++ P + +V + + +L +A +L +P
Sbjct: 126 MVEYGRQLHGLVVRS-GLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMP 173
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 209/639 (32%), Positives = 364/639 (56%), Gaps = 19/639 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + D VSWNT++SG+ K +++ M G D ++S L +
Sbjct: 3 LFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKR 62
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
F G Q+H L+VK G + VYVG++L+ MY++ R+ +A F E+ +SVSWNA+++G
Sbjct: 63 FDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAG 122
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
+ Q D L + M+ + +D +F + L KQ+H +K+G
Sbjct: 123 FVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLEH 182
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMIS-----MNREDAVSLFKEM 246
+++ N ++S+Y+ C + DA +VF + +++ISW +MI+ +E A LF EM
Sbjct: 183 EITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEM 242
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES- 305
+ + + T+ G++ A S G+ +HGL IK SV N LI+MY +F +
Sbjct: 243 HRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTG 302
Query: 306 -MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVL 362
M+D+ +F+ L ++++SWN++++G++QNGLS AV+ FF ++ S + + Y F +VL
Sbjct: 303 VMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVK-FFRYLRSSNIEVDDYAFSAVL 361
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK- 421
+ ++ +L+ GQ+ H+ K +S+ V S+L+ MY K G I +++ F + K
Sbjct: 362 RS--CSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKH 419
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+ AW A+I A+HG + ++ F +M N+ V+ D +TF ++LT C G+I +G L
Sbjct: 420 NTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELL 479
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+SM Y I+P +HY+ VD+LGR G + + +EL+ +P P VL++ LG CR G
Sbjct: 480 NSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVLKTFLGVCRACGE 539
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
+EM ++A+ L+++EP +YV +S++Y++ WE A ++K MK +GV+K G+SW +
Sbjct: 540 IEMATQVANHLLEIEPEDHFAYVSLSHMYSDLKKWEEKANVKKMMKERGVKKVPGWSWIE 599
Query: 602 VGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNS 640
+ + ++ F++ D +H S+EIY M E L EM++L+S
Sbjct: 600 IR--NQVNAFNAEDRSHSLSKEIYLMIEDLTQEMQWLDS 636
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 150/554 (27%), Positives = 269/554 (48%), Gaps = 68/554 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI----GVVFD 56
++MY K + + A F + P+ VSWN +++GF + D + + L+ V D
Sbjct: 89 VDMYAKCERVEDAFGAFMEILEPNSVSWNALIAGFVQVRDTKTAFWLLGLMEMKAAVTMD 148
Query: 57 AVTYSTALSFCLDHEGFLFGL-QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T++ L+ LD F L Q+H+ ++K GL+ E+ + NA+I+ Y+ G + +A+RVF
Sbjct: 149 DGTFAPLLTL-LDDPMFCNLLKQVHAKVLKLGLEHEITICNAMISSYANCGLVSDAKRVF 207
Query: 116 DEM-PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
D + +KD +SWN++++G ++ + A EM R + D ++T SAC E++
Sbjct: 208 DGLGGSKDLISWNSMIAGLSKH-EQKESAFELFTEMHRNWIETDIYTYTGIVSACSGEEH 266
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE--VTGDANKVFRRMHDRNVISWTTMI 232
GK +HG+ IK G SV N L+S Y + V DA +F + ++++SW +++
Sbjct: 267 QSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIM 326
Query: 233 ---SMN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S N EDAV F+ +R + +D F ++ + S ++ G+ H L K++F
Sbjct: 327 TGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFE 386
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISGYAQNGLSLAAVQAFFG 346
S V + LI MY++ ++++ K F+++S + I+WNA+I GYAQ+G ++ F
Sbjct: 387 SNEFVTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQ 446
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ ++ K + TF ++L A H+ +I+ GL+
Sbjct: 447 MCNQNVKLDHVTFTAILTACS-------------HTGLIQEGLE---------------- 477
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSV 464
+ S + Q + E + A + L R G ++N+ KE+ E+ + PD + +
Sbjct: 478 --LLNSMEPVYKIQPRMEH-YAAAVDLLGRAG----LVNKVKELIESMPLNPDPMVLKTF 530
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH--YSCMVDMLGRVGRLEE--------AE 514
L VC G I + + +L+ IEP DH Y + M + + EE E
Sbjct: 531 LGVCRACGEIEMATQVANHLLE---IEPE-DHFAYVSLSHMYSDLKKWEEKANVKKMMKE 586
Query: 515 ELVGQIPGGPGLSV 528
V ++PG + +
Sbjct: 587 RGVKKVPGWSWIEI 600
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 206/418 (49%), Gaps = 14/418 (3%)
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
R+FDEMP +DSVSWN ++SGYT G L +M R G +D SF+
Sbjct: 2 RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCL-FTDMKRCGCYVDGYSFSRLLKGIASA 60
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
K +LG+Q+HG+ +K GY +V VG+ L+ Y+KCE DA F + + N +SW +I
Sbjct: 61 KRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALI 120
Query: 233 S-----MNREDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+ + + A L M + V +D TF L+ + + +H +K
Sbjct: 121 AGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL 180
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAFF 345
E ++CN +I+ YA + D+++VFD L +++ISWN++I+G +++ +A + F
Sbjct: 181 EHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFT 240
Query: 346 GVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ + + + YT+ +++A E S G+ H +IK GL+ V +AL+ MY +
Sbjct: 241 EMHRNWIETDIYTYTGIVSACSGEEHQSF--GKSLHGLVIKKGLEQVTSVSNALISMYIQ 298
Query: 405 --RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
G + ++ +F + K +W +I++ +++G E + F+ + + + D F
Sbjct: 299 FPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFS 358
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+VL C + G+ ++ E + S ++ M + G +E A + QI
Sbjct: 359 AVLRSCSDLATLQLGQQT-HALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQI 415
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 209/655 (31%), Positives = 367/655 (56%), Gaps = 15/655 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y KSG +A +F+++ V+W ++ G+ +++ +A + M G+ D V+
Sbjct: 142 YIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSL 201
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+T LS + + Q+HS ++K G DS + V N+L+ Y + L A ++F+++P
Sbjct: 202 ATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPE 261
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+DSV++NA+L+GY+++G + EAI +M G R +F + +A ++E G+Q
Sbjct: 262 RDSVTFNALLTGYSKEG-FNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQ 320
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----N 235
+HG +K + +V V N L+ YSK + +A+K+F M + + IS+ +++
Sbjct: 321 VHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGR 380
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
++++ LFKE++ G + F L+ +I + GR IH I T+ +SE V N
Sbjct: 381 VKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNS 440
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
L+ MYA+ ++ ++F +L+ + + W A+IS Y Q GL ++ F + + +
Sbjct: 441 LVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGAD 500
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
A T+ S++ A + ++L G++ HSHII G S+ GSAL+DMY K GSI ++ ++
Sbjct: 501 AATYASIVRACASLASLTL--GKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQM 558
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F E ++ +W A+ISA A++GD + + F+EM G++PDS++ LS+L C G++
Sbjct: 559 FQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLV 618
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+G FDSM + Y + P +HY+ +DML R GR +EAE+L+ Q+P P + S+L
Sbjct: 619 EEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLN 678
Query: 535 ACRIHGNVEMGERIADALMKMEP-AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
+C IH N E+ ++ A+ L M+ + YV MSN+YA G+W+ V ++K M+ +GV+K
Sbjct: 679 SCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKK 738
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+SW ++ H F++ D THP+ EI + + L +M K + + AL
Sbjct: 739 VPAYSWVEIK--HKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCAL 791
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 244/487 (50%), Gaps = 51/487 (10%)
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD-------------- 122
L + + I+K G + Y N L+ + + G L AR++FDEMP+K+
Sbjct: 86 LHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKS 145
Query: 123 -----------------SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
+V+W ++ GY Q+ + EA IEM R G+ DHVS +
Sbjct: 146 GNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFR-EAFGLFIEMGRHGIDPDHVSLATL 204
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
S ++ +Q+H IK+GY + + V N L+ +Y K G A ++F + +R+
Sbjct: 205 LSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDS 264
Query: 226 ISWTTMIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
+++ +++ NRE A++LF +M+ G P + TF ++ A + ++ G+ +HG
Sbjct: 265 VTFNALLTGYSKEGFNRE-AINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHG 323
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG---- 335
+K NF+ V N L+ Y++ + + ++ K+F E+ + IS+N L++ YA NG
Sbjct: 324 FVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKE 383
Query: 336 -LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
L L F G + + P F ++L+ AA ++L G++ HS I S+ +V
Sbjct: 384 SLELFKELQFTGFDRRNFP----FATLLSI--AAISLNLDIGRQIHSQTIVTDAISEILV 437
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
G++L+DMY K G E+ R+F++ +S WTA+IS+ + G +E + F EM+ +
Sbjct: 438 GNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKI 497
Query: 455 RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
D+ T+ S++ C + G+ L ++ +I + S +VDM + G +++A
Sbjct: 498 GADAATYASIVRACASLASLTLGKQLHSHIIGSGYIS-NVFSGSALVDMYAKCGSIKDAL 556
Query: 515 ELVGQIP 521
++ ++P
Sbjct: 557 QMFQEMP 563
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 238/490 (48%), Gaps = 51/490 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ YCK+ A +FN++ D V++N +L+G+ K + +A++ +M +G
Sbjct: 240 LDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTE 299
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L+ + + FG Q+H +VK V+V NAL+ YS+ R+VEA ++F E
Sbjct: 300 FTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYE 359
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D +S+N +++ Y +G E++ E+ G + F + S NL++
Sbjct: 360 MPEVDGISYNVLVTCYAWNGRVK-ESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDI 418
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
G+QIH +I + + VGN L+ Y+KC G+AN++F + ++ + WT MIS
Sbjct: 419 GRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQ 478
Query: 236 ---REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
ED + LF EM+ + + T+ ++ A + + G+ +H I + ++S
Sbjct: 479 KGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFS 538
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ L+ MYA+ S++D+ ++F E+ R +SWNALIS YAQNG ++ F +++
Sbjct: 539 GSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGL 598
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P++ + S+L A H +++ GL F+S
Sbjct: 599 QPDSVSLLSILCACS-------------HCGLVEEGLQ------------------YFDS 627
Query: 412 -QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
R++ +K +A T I L R G ++ K M PD I + SVL CG
Sbjct: 628 MTRIYKLVPKKEHYAST--IDMLCRGGRFDEAE---KLMAQMPFEPDEIMWSSVLNSCG- 681
Query: 471 NGMIHKGRHL 480
IHK + L
Sbjct: 682 ---IHKNQEL 688
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 120/235 (51%), Gaps = 4/235 (1%)
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N +I Y + ++ ++ +FD + R ++W LI GYAQN A F + +
Sbjct: 136 NTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGID 195
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ + ++L+ G E S+ ++ HSH+IK+G DS +V ++LLD Y K S+ +
Sbjct: 196 PDHVSLATLLS--GFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAF 253
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
++FN+ E+ + A+++ ++ G +N F +M+ G RP TF ++LT +
Sbjct: 254 QLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLD 313
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
I G+ + ++K + + + ++D + R+ EA +L ++P G+S
Sbjct: 314 DIEFGQQVHGFVVKCNFVW-NVFVANALLDFYSKHDRVVEASKLFYEMPEVDGIS 367
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 214/654 (32%), Positives = 365/654 (55%), Gaps = 28/654 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN--PDIVSWNTVLSGFEKSDDALSFALRMNLI------- 51
+N+Y K+ AL +F+++N+ D VSWN++++ F ++ + S + ++L
Sbjct: 53 LNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRAN 112
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
V+ +A T + S + + G Q HS+ VK G +VYVG++L+ MY + G + +A
Sbjct: 113 NVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDA 172
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQD--GDYGVEAILALIEMMRKGLRL-DHVSFTSAASA 168
R++FD MP +++VSW ++SGY D VE + E+MR+ + + + TS SA
Sbjct: 173 RKLFDRMPERNTVSWATMISGYASSDIADKAVE----VFELMRREEEIQNEFALTSVLSA 228
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
+ + G+Q+H ++IK G VSV N L++ Y+KC DA + F D+N I+W
Sbjct: 229 LTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITW 288
Query: 229 TTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
+ M++ + + A+ LF +M GV P++ T +G+I+A S V EG+ +H K
Sbjct: 289 SAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFK 348
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
F + V + ++ MYA+ S+ D+ K F+ + +++ W ++I+GY QNG +
Sbjct: 349 LGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLN- 407
Query: 344 FFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
+G ++ + PN T SVL A + +L G++ H+ IIK G + +GSAL M
Sbjct: 408 LYGKMQMERVIPNELTMASVLRACSSLA--ALDQGKQMHARIIKYGFKLEVPIGSALSAM 465
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K GS+ + +F + +W A+IS L+++G + F++M +G++PD +TF
Sbjct: 466 YTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTF 525
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+++L+ C G++ +G F M +++I P +HY+CMVD+L R G+L EA+E +
Sbjct: 526 VNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESAT 585
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAI 581
GL + + LLGAC+ H N E+G + L+++ S +YVL+S++Y GD E V
Sbjct: 586 VDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVER 645
Query: 582 LRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
+R+ MK++GV KE G SW ++ + +H F GDN HP+ +EI E L M
Sbjct: 646 VRRIMKARGVNKEPGCSWIELKGL--VHVFVVGDNQHPQVDEIRLELELLTKLM 697
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 151/511 (29%), Positives = 267/511 (52%), Gaps = 29/511 (5%)
Query: 67 CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM--PNKDSV 124
C ++ L G LH+ I+K G S +YV N + +Y++ L A +FD + +KD V
Sbjct: 21 CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV-----SFTSAASACGHEKNLELGK 179
SWN++++ ++Q ++ + I + R+ +R ++V + SA + ++ GK
Sbjct: 81 SWNSLINAFSQ--NHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGK 138
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN---- 235
Q H V++K G V VG+ L++ Y K DA K+F RM +RN +SW TMIS
Sbjct: 139 QAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSD 198
Query: 236 -REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+ AV +F+ MR + N+ ++ A++ V GR +H L IK L+ SV N
Sbjct: 199 IADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVAN 258
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGVIK 349
L+TMYA+ S+ D+ + F+ + I+W+A+++GYAQ G S A++ F GV+
Sbjct: 259 ALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVL- 317
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ +T V+NA ++ ++ G++ HS K+G V SA++DMY K GS+
Sbjct: 318 ---PSEFTLVGVINA--CSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLA 372
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++++ F Q+ WT+II+ ++GDYE +N + +M+ + V P+ +T SVL C
Sbjct: 373 DARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACS 432
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+ +G+ + ++K Y + S + M + G L++ + ++P +S
Sbjct: 433 SLAALDQGKQMHARIIK-YGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWN 491
Query: 530 QSLLGACRI-HGN--VEMGERIADALMKMEP 557
+ G + HGN +E+ E++ +K +P
Sbjct: 492 AMISGLSQNGHGNKALELFEKMLLEGIKPDP 522
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 215/635 (33%), Positives = 350/635 (55%), Gaps = 16/635 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFAL----RMNLIGVVF 55
+N+Y K G KA +F ++ N D+VSWN +++G+ +K SF + RM +
Sbjct: 52 VNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLP 111
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T+S + GLQ H+L +K +V+VG++LI MY + G +++AR+VF
Sbjct: 112 NGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVF 171
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D +P +++VSW I+SGY + EA M R+ D +TS SA +
Sbjct: 172 DTIPERNTVSWATIISGYAME-RMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLV 230
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
GKQIH +++K G + SVGN L++ Y KC DA K F D++ I+W+ MI+
Sbjct: 231 HYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGY 290
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A++LF M L+G P++ TF+G+I+A S ++EG+ IHG +K + +
Sbjct: 291 AQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQI 350
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
L+ MYA+ S+ D+ K FD L +I+ W ++ISGYAQNG + A+ + + E
Sbjct: 351 YFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQME 410
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ T SVL A + +L+ G++ H+ IK G + +GSAL MY K GS+
Sbjct: 411 RIMPHELTMASVLRACSSLA--ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLE 468
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ VF + W A+IS L+++G+ + F+E+ + +PD +TF++VL+ C
Sbjct: 469 DGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACS 528
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G+ F ML ++ I P +HY+CMVD+L R G+L E +E + G+ +
Sbjct: 529 HMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLW 588
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+ LLGACR + N E+G + LM++ S +Y+L+S++Y G + V +R+ MK +
Sbjct: 589 RILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLR 648
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
GV KE G SW ++ +H F GD HP+ +I
Sbjct: 649 GVNKEPGCSWIELK--SQVHVFVVGDQIHPQIVKI 681
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 256/482 (53%), Gaps = 12/482 (2%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
MNL + ++ L C + G +H+ +++ G S VY+ N+L+ +Y++ G
Sbjct: 1 MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 60
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH-VSFTSAA 166
+V+A+ VF+ + NKD VSWN +++GY+Q G G ++ L + MR L + +F+
Sbjct: 61 IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 120
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
+A G Q H ++IK V VG+ L++ Y K DA KVF + +RN +
Sbjct: 121 TAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTV 180
Query: 227 SWTTMIS---MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
SW T+IS M R +A LF MR + + + ++ A+++ +LV G+ IH L
Sbjct: 181 SWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLA 240
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
+K LS SV N L+TMY + + D+ K F+ ++ I+W+A+I+GYAQ G S A+
Sbjct: 241 LKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEAL 300
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F+ + + +KP+ +TF V+N A DI +L+ G++ H + +K G + +AL+
Sbjct: 301 NLFYNMHLNGNKPSEFTFVGVIN---ACSDIGALEEGKQIHGYSLKAGYECQIYFMTALV 357
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K GS+ ++++ F+ +E WT++IS A++G+ E+ + + M+ + + P +
Sbjct: 358 DMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHEL 417
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
T SVL C + +G+ + +K Y S + M + G LE+ + +
Sbjct: 418 TMASVLRACSSLAALEQGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGSLEDGNLVFRR 476
Query: 520 IP 521
+P
Sbjct: 477 MP 478
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 219/634 (34%), Positives = 346/634 (54%), Gaps = 19/634 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTY 60
Y + G+ D A +F+ + D V WN +L+G+ K SD + M + + +AVT+
Sbjct: 179 YLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTF 238
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
LS C G+QLH L+V GLD E + N+L++MYS+ GR +A ++F M
Sbjct: 239 DCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSR 298
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
D+V+WN ++SGY Q G E+++ EM+ G+ D ++F+S + +NLE +Q
Sbjct: 299 ADTVTWNCMISGYVQSG-LMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQ 357
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE--- 237
IH ++ + + + L+ Y KC A K+F + + +V+ +T MIS
Sbjct: 358 IHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGL 417
Query: 238 --DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
DA+ +F+ + + PN++T + ++ I +K GR +HG IK F + ++
Sbjct: 418 NIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCA 477
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNA 355
+I MYA+ M + ++F LS R+I+SWN++I+ AQ+ AA+ F ++ +
Sbjct: 478 VIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIF----RQMGVSG 533
Query: 356 YTFG--SVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
F S+ A+ A ++ S G+ H +IK L D S L+DMY K G++ +
Sbjct: 534 ICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAM 593
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRN 471
VF+ +EK+ +W +II+A HG + + F EM E G RPD ITFL ++++C
Sbjct: 594 NVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHV 653
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + +G F SM +DY I+P +HY+C+VD+ GR GRL EA E V +P P V +
Sbjct: 654 GDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGT 713
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGA R+H NVE+ + + LM ++P SG YVL+SN +A G+WE V +R MK + V
Sbjct: 714 LLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREV 773
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+K G+SW ++ I H F SGD HP S IY
Sbjct: 774 QKIPGYSWIEINKIT--HLFVSGDVNHPESSHIY 805
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 265/525 (50%), Gaps = 17/525 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN--PDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVF 55
+ MY G F +F L++ I WN+++S F + + AL+F +M GV
Sbjct: 73 LGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSP 132
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T+ + C+ + F L + G+D +V ++LI Y +G++ A ++F
Sbjct: 133 DVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLF 192
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKN 174
D + KD V WN +L+GY + G ++++ +MR + + V+F S C +
Sbjct: 193 DRVLQKDCVIWNVMLNGYAKCG--ASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLL 250
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
++LG Q+HG+ + G S+ N L+S YSKC DA K+FR M + ++W MIS
Sbjct: 251 IDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISG 310
Query: 235 N-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
E+++ F EM GV P+ +TF L+ ++S ++ R IH ++ + +
Sbjct: 311 YVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLD 370
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ + LI Y + + ++K+F + + +++ + A+ISGY NGL++ A++ F ++K
Sbjct: 371 IFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVK 430
Query: 350 -ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ PN T S+L +G ++LK G+ H IIK G D+ +G A++DMY K G +
Sbjct: 431 VKISPNEITLVSILPVIGGL--LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRM 488
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ +F ++ +W ++I+ A+ + + ++ F++M G+ D ++ + L+ C
Sbjct: 489 NLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSAC 548
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
G+ + M+K + + S ++DM + G L+ A
Sbjct: 549 ANLPSESFGKAIHGFMIK-HSLALDVYSESTLIDMYAKCGNLKAA 592
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 221/453 (48%), Gaps = 12/453 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV--SWNAILSGY 133
G Q+H+ ++ + + Y ++ MY+ G ++F + ++ S WN+I+S +
Sbjct: 50 GKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSF 109
Query: 134 TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
+ G +A+ +M+ G+ D +F AC KN + + + +G +
Sbjct: 110 VRMGLLN-QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCN 168
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRL 248
V + L+ Y + A K+F R+ ++ + W M++ + + F MR+
Sbjct: 169 EFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRM 228
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
D + PN VTF ++ + L+ G +HGL + + E S+ N L++MY++ D
Sbjct: 229 DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDD 288
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGA 367
+ K+F +S + ++WN +ISGY Q+GL ++ F+ +I P+A TF S+L +V
Sbjct: 289 AIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSK 348
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
E+ L++ ++ H +I++ + D + SAL+D Y K + +Q++F++ +T
Sbjct: 349 FEN--LEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFT 406
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
A+IS +G + F+ + + P+ IT +S+L V G + GR L ++K
Sbjct: 407 AMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKK 466
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ + ++DM + GR+ A E+ G++
Sbjct: 467 -GFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRL 498
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 131/289 (45%), Gaps = 14/289 (4%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR- 319
L+ S L+++G+ +H I + ++ MYA S + K+F L R
Sbjct: 37 LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96
Query: 320 -EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQ 377
I WN++IS + + GL A+ +F ++ P+ TF ++ A A ++ K +
Sbjct: 97 SSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKN--FKGIE 154
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
+ +G+D + V S+L+ Y + G I + ++F+ +K W +++ A+ G
Sbjct: 155 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCG 214
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD-SMLKDYHIEPSPDH 496
+SV+ F M + P+++TF VL+VC +I G L ++ E S +
Sbjct: 215 ASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKN 274
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
++ M + GR ++A +L +S ++ C I G V+ G
Sbjct: 275 --SLLSMYSKCGRFDDAIKLFRM------MSRADTVTWNCMISGYVQSG 315
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF----EKSDDALSFALRMNLIGVVFD 56
++MY K G A+ +F+ + +IVSWN++++ + + D F + G D
Sbjct: 580 IDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPD 639
Query: 57 AVTYSTALSFCLD----HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
+T+ +S C EG F S+ +G+ + ++ ++ R GRL EA
Sbjct: 640 QITFLEIISLCCHVGDVDEGVRF---FRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAY 696
Query: 113 RVFDEMP-NKDSVSWNAIL 130
MP D+ W +L
Sbjct: 697 ETVKSMPFPPDAGVWGTLL 715
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 213/638 (33%), Positives = 361/638 (56%), Gaps = 18/638 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ +Y + F A +F+ + + D VS+N+++SG + SD AL +M + D
Sbjct: 255 VTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDC 314
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT ++ LS C + G QLHS ++K G+ S++ V AL+ +Y + A +F
Sbjct: 315 VTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLT 374
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
++ V WN +L + + + E+ +M KGL + ++ S C L+L
Sbjct: 375 AQTENVVLWNVMLVAFGKLDNLS-ESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDL 433
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+QIH IK G+ +V V +VL+ Y+K A+ + R + + +V+SWT +IS +
Sbjct: 434 GEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQ 493
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ FKEM G+ +++ F I A + + +GR IH + + + S+
Sbjct: 494 HNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSI 553
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+++YAR ++++ F+++ ++ ISWN LISG+AQ+G A++ F + +K
Sbjct: 554 GNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVF-AQMNRAK 612
Query: 353 PNA--YTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
A +TFGS AV AA +I+ +K G++ H+ IIK G DSD V +AL+ Y K GSI
Sbjct: 613 LEASFFTFGS---AVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIE 669
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++R F E EK++ +W A+I+ ++HG +N F++M+ G P+ +TF+ VL+ C
Sbjct: 670 DARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACS 729
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ KG F+SM K++ + P P HY+C+VD++ R G L A + + ++P P ++
Sbjct: 730 HVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIW 789
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LL AC +H NVE+GE A L+++EP S +YVL+SN+YA G W+ R+ M+++
Sbjct: 790 RTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNR 849
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
GV+KE G SW +V + +H F GD HP +++IY
Sbjct: 850 GVKKEPGRSWIEVK--NSVHAFYVGDRLHPLADKIYEF 885
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/533 (28%), Positives = 262/533 (49%), Gaps = 19/533 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ +Y K+G A +F+NL D VSW ++SGF ++ ++A+ M+ G+
Sbjct: 154 IGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTP 213
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+S+ LS C + F G QLH+L+ K+G E YV NAL+T+YSR V A +VF +
Sbjct: 214 YVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSK 273
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +KD VS+N+++SG Q G + A+ +M R L+ D V+ S SAC L
Sbjct: 274 MQSKDEVSFNSLISGLAQQG-FSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCK 332
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+Q+H IK G + + V L+ Y C A+++F NV+ W M+
Sbjct: 333 GEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGK 392
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++ +F++M++ G+ PN T+ ++ + + G IH IKT F V
Sbjct: 393 LDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYV 452
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
C+ LI MYA+ + + + L+ +++SW ALISGYAQ+ L A++ F ++
Sbjct: 453 CSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGI 512
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ + F S ++A + +L G++ H+ G D +G+AL+ +Y + G I E+
Sbjct: 513 QSDNIGFSSAISACAGIQ--ALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEA 570
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
F + K +W +IS A+ G E + F +M + TF S ++
Sbjct: 571 YLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANI 630
Query: 472 GMIHKGRHLFDSMLK---DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
I +G+ + ++K D IE S + ++ + G +E+A ++P
Sbjct: 631 ANIKQGKQIHAMIIKRGFDSDIEVS----NALITFYAKCGSIEDARREFCEMP 679
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 264/528 (50%), Gaps = 24/528 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+++Y G D + +F ++ N + SW+ ++SGF + S+ L M V
Sbjct: 52 VDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTE 111
Query: 58 VTYSTALSFCLDHE-GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+++++ L C H G + Q+H+ I+ GL + N LI +Y++ G ++ AR+VFD
Sbjct: 112 ISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFD 171
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ KDSVSW A++SG++Q+G Y EAI EM G+ F+S S C K +
Sbjct: 172 NLCTKDSVSWVAMISGFSQNG-YEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFD 230
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
+G+Q+H + K G V N L++ YS+ A KVF +M ++ +S+ ++IS
Sbjct: 231 VGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLA 290
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ A+ LF +M+ D + P+ VT L+ A + + +G +H IK S+
Sbjct: 291 QQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMI 350
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+ +Y ++ + ++F ++ WN ++ + + L + F + ++
Sbjct: 351 VEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGK----LDNLSESFRIFRQM 406
Query: 352 K-----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ PN +T+ S+L + + L G++ H+ +IK G + V S L+DMY K G
Sbjct: 407 QIKGLIPNQFTYPSILRTCTSVGALDL--GEQIHTQVIKTGFQFNVYVCSVLIDMYAKHG 464
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ + + E +WTA+IS A+H + + FKEM N+G++ D+I F S ++
Sbjct: 465 KLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAIS 524
Query: 467 VCGRNGMIHKGRHLF-DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
C +++GR + S + Y + S + +V + R GR++EA
Sbjct: 525 ACAGIQALNQGRQIHAQSYVSGYSEDLSIG--NALVSLYARCGRIKEA 570
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 235/475 (49%), Gaps = 23/475 (4%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
G+ + TY L CL+ + +LH I+K G +E + N L+ +Y G L
Sbjct: 5 GICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGV 64
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIE-MMRKGLRLDHVSFTSAASAC- 169
+VF++MPN+ SW+ I+SG+ + +L L M+ + + +SF S AC
Sbjct: 65 VKVFEDMPNRSVRSWDKIISGFMEKK--MSNRVLDLFSCMIEENVSPTEISFASVLRACS 122
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
GH + +QIH I G + N L+ Y+K + A KVF + ++ +SW
Sbjct: 123 GHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWV 182
Query: 230 TMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
MIS E+A+ LF EM G+ P F ++ + L G +H L K
Sbjct: 183 AMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKY 242
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
E VCN L+T+Y+R + +EKVF ++ ++ +S+N+LISG AQ G S A++ F
Sbjct: 243 GSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELF 302
Query: 345 FGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ ++ KP+ T S+L+A A + +L G++ HS++IK G+ SD IV ALLD+Y
Sbjct: 303 TKMKRDYLKPDCVTVASLLSA--CASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYV 360
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
I + +F Q ++ W ++ A + + F++M+ KG+ P+ T+ S
Sbjct: 361 NCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPS 420
Query: 464 VLTVCGRNGMIHKGRHLFDSMLK---DYHIEPSPDHYSC--MVDMLGRVGRLEEA 513
+L C G + G + ++K +++ Y C ++DM + G+L+ A
Sbjct: 421 ILRTCTSVGALDLGEQIHTQVIKTGFQFNV------YVCSVLIDMYAKHGKLDTA 469
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 206/447 (46%), Gaps = 46/447 (10%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M +G+ + ++ C + +L K++HG +K+G+G + N L+ Y
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 210 TGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFKEMRLDGVCPNDVTFIGLIHA 264
KVF M +R+V SW +IS E +S LF M + V P +++F ++ A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 265 IS---IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
S IG ++ IH I L P + N LI +YA+ + + KVFD L ++
Sbjct: 121 CSGHRIG--IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDS 178
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCH 380
+SW A+ISG++QNG A+ F + P Y F SVL+ G + G++ H
Sbjct: 179 VSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLS--GCTKIKLFDVGEQLH 236
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
+ + K G + V +AL+ +Y + + +++VF++ Q K E ++ ++IS LA+ G +
Sbjct: 237 ALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSD 296
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-------------- 486
+ F +M+ ++PD +T S+L+ C NG + KG L ++K
Sbjct: 297 GALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALL 356
Query: 487 DYHIEPSPDH----------------YSCMVDMLGRVGRLEEAEELVGQIPGG---PGLS 527
D ++ S ++ M+ G++ L E+ + Q+ P
Sbjct: 357 DLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQF 416
Query: 528 VLQSLLGACRIHGNVEMGERIADALMK 554
S+L C G +++GE+I ++K
Sbjct: 417 TYPSILRTCTSVGALDLGEQIHTQVIK 443
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 218/669 (32%), Positives = 382/669 (57%), Gaps = 30/669 (4%)
Query: 3 MYCKSGQFDKALCIFNNL-NNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAV 58
MY K + A +F+ + D+VSWN+++S + +S +AL M + +
Sbjct: 224 MYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTY 283
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ AL C D G+ +H+ ++K V+V NALI MY+R+G++ EA +F M
Sbjct: 284 TFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNM 343
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+ D++SWN++LSG+ Q+G Y EA+ EM G + D V+ S +A N G
Sbjct: 344 DDWDTISWNSMLSGFVQNGLYH-EALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHG 402
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED 238
QIH ++K G + + VGN L+ Y+K + +F +M D++V+SWTT+I+ + ++
Sbjct: 403 MQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQN 462
Query: 239 -----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
A+ LF+E++L+G+ + + ++ A S L+ + IH I+ LS+ +
Sbjct: 463 GSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG-LSDLVLQ 521
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-- 351
N ++ +Y ++ + ++F+ + ++++SW ++IS Y NGL+ A++ F ++KE+
Sbjct: 522 NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALE-LFHLMKETGV 580
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P++ + S+L+A + +LK G+ H +I+ G + + S L+DMY + G++ +S
Sbjct: 581 EPDSISLVSILSAAASLS--ALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKS 638
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VFN + K WT++I+A HG + ++ F+ ME++ + PD I F++VL C +
Sbjct: 639 RNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHS 698
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++++GR +SM +Y +EP P+HY+C+VD+LGR LEEA + V + P V +
Sbjct: 699 GLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCA 758
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGAC+IH N E+GE A L++M+P G+YVL+SN+Y+ + W+ V +R MK+ G+
Sbjct: 759 LLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGL 818
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY----RMAECLGSEMKYL--------N 639
+K G SW +VG + +H F + D +HP+S EIY ++ E L E Y+ N
Sbjct: 819 KKNPGCSWIEVG--NKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHN 876
Query: 640 SKRERAIAL 648
+K E + +
Sbjct: 877 AKEEEKVQM 885
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 234/419 (55%), Gaps = 13/419 (3%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHS-LIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
YS+ L C + G Q+H+ +I L + V++ L+ MY + G LV+A ++FD
Sbjct: 80 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 139
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP+K +WNA++ Y +G+ + ++ EM G+ LD +F ACG K+
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGE-PLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRY 198
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMISMNR 236
G ++HG++IK GY + V V N ++ Y+KC A ++F RM ++ +V+SW +MIS
Sbjct: 199 GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYS 258
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+A+ LF EM+ + PN TF+ + A + +K+G IH +K+++
Sbjct: 259 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 318
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI MYARF M ++ +F + + ISWN+++SG+ QNGL A+Q F+ ++++
Sbjct: 319 VANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQ-FYHEMRDA 377
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+ S++ A +A + HG + H++ +K GLDSD VG++L+DMY K S+
Sbjct: 378 GQKPDLVAVISIIAA--SARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMK 435
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+F++ +K +WT II+ A++G + + F+E++ +G+ D + S+L C
Sbjct: 436 YMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLAC 494
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 189/374 (50%), Gaps = 21/374 (5%)
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST-----YSKCEVTGDANK 215
+++S CG +K L G+Q+H I ++ +V +ST Y KC DA K
Sbjct: 80 AYSSVLELCGSKKALSEGQQVHAHMIT----SNALFNSVFLSTRLVFMYGKCGCLVDAEK 135
Query: 216 VFRRMHDRNVISWTTMIS---MNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
+F M + + +W MI N E ++ L++EMR+ G+ + TF ++ A +
Sbjct: 136 LFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKD 195
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE-IISWNALIS 329
+ G +HGL IK ++S V N ++ MY + + + ++FD + +E ++SWN++IS
Sbjct: 196 RRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMIS 255
Query: 330 GYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVG 387
Y+ NG S+ A++ F + K S PN YTF + A+ A ED S +K G H+ ++K
Sbjct: 256 AYSSNGQSIEALRLFGEMQKASLAPNTYTF---VAALQACEDSSFIKQGMFIHATVLKSS 312
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+ V +AL+ MY + G + E+ +F + +W +++S ++G Y + +
Sbjct: 313 YYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYH 372
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
EM + G +PD + +S++ R+G G + +K+ ++ + +VDM +
Sbjct: 373 EMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKN-GLDSDLQVGNSLVDMYAKF 431
Query: 508 GRLEEAEELVGQIP 521
++ + + ++P
Sbjct: 432 CSMKYMDCIFDKMP 445
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 213/608 (35%), Positives = 350/608 (57%), Gaps = 16/608 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS---FALRMNLIGVVFDA 57
+++Y K D+A+ F + ++VSW T++SGF + DD++S F M +G +
Sbjct: 290 IDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINN 349
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++ L+ C + +QLHS I K G + V +ALI MYS+ G + + RVF E
Sbjct: 350 YTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFRE 409
Query: 118 MPN-KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M + K+ W ++S + Q G G A+ M+++GLR D +S S +L
Sbjct: 410 MESTKNLAMWAVMISAFAQSGSTG-RAVELFQRMLQEGLRPDKFCSSSVLSII---DSLS 465
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
LG+ IH +K+G T +SVG+ L + YSKC ++ VF +M D++ +SW +MI+
Sbjct: 466 LGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFS 525
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E AV LF+EM L+ + P+ +T + A S + +++G+ +HG ++ E
Sbjct: 526 EHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVL 585
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
V L+ MY++ ++ + +VFD L ++ S ++L+SGYAQNG A+ F + + +
Sbjct: 586 VGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMAD 645
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+++T SV+ AV SL G + H+ + K+GL+++ VGS+L+ MY K GSI E
Sbjct: 646 LWIDSFTVSSVIGAVAILN--SLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDE 703
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+VF + ++ +WTA+I + A+HG + + M +G +PDS+TF+ VL+ C
Sbjct: 704 CHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSH 763
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
NGM+ +G +SM K+Y IEP HY+CMVD+LGR GRL+EAE + +P P +
Sbjct: 764 NGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWG 823
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
LL AC++HG++E+G A ++++EP +G+YV +SN+ A+ G WE V +R M+ G
Sbjct: 824 ILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTG 883
Query: 591 VRKEVGFS 598
V+KE G+S
Sbjct: 884 VKKEPGWS 891
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 177/598 (29%), Positives = 302/598 (50%), Gaps = 49/598 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M YCKS AL +F+ +P+++SWN ++SG ++ +D+ +M G +
Sbjct: 88 MGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQ 147
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY + LS C L+G ++SL +K G S YV +I ++++ +A RVF +
Sbjct: 148 FTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQD 207
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ V WNAI+SG ++ + V A+ +M + + +F+S +AC + LE
Sbjct: 208 VLCENVVCWNAIISGAVKNRENWV-ALDLFCQMCCRFFMPNSFTFSSILTACAALEELEF 266
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MN 235
G+ + G IK G G V VG ++ Y+KC A K F RM RNV+SWTT+IS +
Sbjct: 267 GRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQ 326
Query: 236 REDAVS---LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++D++S FKEMR G N+ T ++ A + ++KE +H KT F + +V
Sbjct: 327 KDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNV 386
Query: 293 CNCLITMYARFESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ LI MY++ + SE+VF E+ S + + W +IS +AQ+G + AV+ F +++E
Sbjct: 387 SSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEG 446
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ + SVL+ + SL G+ H +I+K+GL +D VGS+L MY K GS+ E
Sbjct: 447 LRPDKFCSSSVLSIID-----SLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEE 501
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S VF + +K +W ++I+ + H E + F+EM + +RPD +T + LT C
Sbjct: 502 SYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSA 561
Query: 471 NGMIHKGRHLFDSMLKD----------------------------YHIEPSPDHYSC--M 500
+ KG+ + L+ + + P D +SC +
Sbjct: 562 LHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSL 621
Query: 501 VDMLGRVGRLEEAEELVGQIPGGP---GLSVLQSLLGACRIHGNVEMGERIADALMKM 555
V + G +E+A L +I + S++GA I ++++G ++ + KM
Sbjct: 622 VSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKM 679
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 226/463 (48%), Gaps = 27/463 (5%)
Query: 79 LHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
LH+ +K L S ++ N+L+ Y + +V A R+FD+ P+ + +SWN ++SG Q+
Sbjct: 67 LHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNF 126
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ ++ +M G + ++ S SAC + G+ ++ +++K G+ ++ V
Sbjct: 127 SFE-DSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVR 185
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEMRLDGVC 252
++ ++K DA +VF+ + NV+ W +IS NRE+ A+ LF +M
Sbjct: 186 AGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFM 245
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
PN TF ++ A + ++ GR + G IK + V +I +YA+ M + K
Sbjct: 246 PNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKE 305
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGAAED 370
F + R ++SW +ISG+ Q S++A FF +++ K N YT SVL A E
Sbjct: 306 FLRMPIRNVVSWTTIISGFVQKDDSISAFH-FFKEMRKVGEKINNYTITSVLTA--CTEP 362
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA-WTAI 429
+ +K + HS I K G D V SAL++MY K G + S+RVF E + A W +
Sbjct: 363 VMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVM 422
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK--- 486
ISA A+ G + F+ M +G+RPD SVL++ + GR + +LK
Sbjct: 423 ISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL---GRLIHCYILKIGL 479
Query: 487 --DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
D + S + M + G LEE+ + Q+P +S
Sbjct: 480 FTDISVGSS------LFTMYSKCGSLEESYTVFEQMPDKDNVS 516
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 181/362 (50%), Gaps = 15/362 (4%)
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVC 252
N LM Y K A ++F + NVISW +IS + ED+ F +MR G
Sbjct: 85 NSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFD 144
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
PN T+ ++ A + G +++ L +K F S V +I ++A+ S +D+ +V
Sbjct: 145 PNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRV 204
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDI 371
F ++ C ++ WNA+ISG +N + A+ F + + PN++TF S+L A A E+
Sbjct: 205 FQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEE- 263
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
L+ G+ +IK G D VG+A++D+Y K + ++ + F ++ +WT IIS
Sbjct: 264 -LEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIIS 322
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD-YHI 490
+ D S + FKEM G + ++ T SVLT C MI + L + K +++
Sbjct: 323 GFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYL 382
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN----VEMGE 546
+ + S +++M ++G ++ +E + ++ L++ ++ A G+ VE+ +
Sbjct: 383 DSNVS--SALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQ 440
Query: 547 RI 548
R+
Sbjct: 441 RM 442
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 372 SLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+L++ + H+H +K L S+ + ++L+ Y K S+ + R+F++T + +W +I
Sbjct: 60 TLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILI 119
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
S ++ +E F +M G P+ T+ SVL+ C G G ++ LK+
Sbjct: 120 SGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFF 179
Query: 491 EPSPDHYSCMVDMLGRVGRLEEA 513
+ M+D+ ++ E+A
Sbjct: 180 SNGYVR-AGMIDLFAKLCSFEDA 201
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 215/648 (33%), Positives = 360/648 (55%), Gaps = 21/648 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
MY K G AL +F+ + +P+ VSW +++ F ++ +AL + RM L G+ D
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+ A+ C + G LH++I++ L + ++ +G ALITMY+R L AR+ FDEM
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 119 PNKDSVSWNAILSGYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
K V+WNA+++GY+++GD+ ++ ++ +G++ D ++F+SA AC ++
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G++I ++ GY + V N L++ YSKC A KVF R+ +R+VI+W TMIS
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ A+ LF+ M + PN VTFIGL+ A + +++GR IH + + S+
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300
Query: 292 VCNCLITMYARFES-MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ N L+ MY + S ++++ +VF+ L R++I+WN LI Y Q G + A+ F + E
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ PN T +VL+A + + G+ H+ I +D ++ ++L++MY + GS+
Sbjct: 361 NVAPNEITLSNVLSACAVLG--AKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLD 418
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ VF ++KS +W+ +I+A A+HG + + F E+ +G+ D +T +S L+ C
Sbjct: 419 DTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS 478
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
GM+ +G F SM+ D+ + P H+ CMVD+L R GRLE AE L+ +P P
Sbjct: 479 HGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAW 538
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYV-LMSNLYAEKGDWEMVAILRKGMKS 588
SLL C++H + + R+AD L ++E S V L+SN+YAE G W+ V RK
Sbjct: 539 TSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDV---RKTRNR 595
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ RK G S+ ++ D +H F +GD +HP E I + L +MK
Sbjct: 596 RAARKNPGCSYIEINDT--VHEFVAGDKSHPEEELIAAEIKRLSKQMK 641
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 259/498 (52%), Gaps = 23/498 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLI-----GVV 54
+ MY + + A F+ + +V+WN +++G+ ++ D + + +++ G+
Sbjct: 101 ITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMK 160
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
DA+T+S+AL C G ++ + V G S+ V NALI MYS+ G L AR+V
Sbjct: 161 PDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKV 220
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD + N+D ++WN ++SGY + G +A+ M + + V+F +AC + ++
Sbjct: 221 FDRLKNRDVIAWNTMISGYAKQG-AATQALELFQRMGPNDPKPNVVTFIGLLTACTNLED 279
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT-GDANKVFRRMHDRNVISWTTMIS 233
LE G+ IH + GY + + +GNVL++ Y+KC + +A +VF R+ R+VI+W +I
Sbjct: 280 LEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIV 339
Query: 234 M-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+DA+ +FK+M+L+ V PN++T ++ A ++ ++G+ +H L +
Sbjct: 340 AYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKA 399
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ + N L+ MY R S+ D+ VF + + ++SW+ LI+ YAQ+G S ++ F+ ++
Sbjct: 400 DVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELL 459
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHG-QRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+E + T S L+A + LK G Q S + GL D ++D+ + G
Sbjct: 460 QEGLAADDVTMVSTLSA--CSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAG 517
Query: 407 SIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE---SVMNQFKEMENKGVRPDSITFL 462
+ ++ + ++ AWT+++S H D + V ++ E+E++ ++T L
Sbjct: 518 RLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESED-EHSTVTLL 576
Query: 463 S-VLTVCGRNGMIHKGRH 479
S V GR + K R+
Sbjct: 577 SNVYAEAGRWDDVRKTRN 594
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 210/638 (32%), Positives = 350/638 (54%), Gaps = 15/638 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y KS +A +F ++ + + VSW ++ G+ +++ +A + M GV D +T+
Sbjct: 87 YVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITF 146
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+T LS D LQ+HS I++FG + + V N+L+ Y + L A ++F EMP
Sbjct: 147 ATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPT 206
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
KDSVS+N +++GYT+ G + EA+ ++M + +F + +++ G+Q
Sbjct: 207 KDSVSFNVMITGYTKYG-FREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQ 265
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----N 235
IHG++IK Y + V N L+ YSK + A +F M + + +S+ +I+
Sbjct: 266 IHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQ 325
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
E + LFK ++ + F ++ +I + GR H + T +SE V N
Sbjct: 326 YEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNA 385
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
L+ MYA+ E +D+ ++F L+ R + W A+IS Y Q G A++ F + +E+ +
Sbjct: 386 LVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGD 445
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
TF S L A +SL G++ HS +I++GL S GS L+DMY GS+ ++ V
Sbjct: 446 QATFASTLKASANLASVSL--GKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEV 503
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F E +++ W A+ISA +++GD E+ + F +M G+ PDS++FLSVLT C G++
Sbjct: 504 FKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLV 563
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
K F+SM + Y ++P HY+ M+D+L R GR EAE L+ ++P P + S+L
Sbjct: 564 EKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLN 623
Query: 535 ACRIHGNVEMGERIADALMKMEP-AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
+CRIH N ++ ++ AD L KM+ + +YV MSN+YAE G WE A ++K M+ +GV+K
Sbjct: 624 SCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKK 683
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
+SW ++ +H F++ D THP++E+I R L
Sbjct: 684 VTAYSWVEID--HRVHVFTANDRTHPQTEQIRRKINSL 719
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 233/455 (51%), Gaps = 13/455 (2%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
N +++ Y + L AR +F+ M +++ VSW ++ GY+Q+ EA EM R G+
Sbjct: 81 NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQ-PKEAFNLYTEMCRSGV 139
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
+ DH++F + S L+ QIH I+ G+ + V N L+ +Y K A++
Sbjct: 140 KPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQ 199
Query: 216 VFRRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
+F M ++ +S+ MI+ RE+A+ LF +MR P+ TF ++ +S+G+
Sbjct: 200 LFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAML-GMSVGSE 258
Query: 271 -VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALIS 329
V G+ IHGL IKT+++ + V N L+ Y++ + + ++ +FDE+ + +S+N +I+
Sbjct: 259 DVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIIT 318
Query: 330 GYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
GYA NG + F + S + F ++L+ AA +++L G++ H+ +
Sbjct: 319 GYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSV--AAIELNLSMGRQTHAQAVVTTA 376
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
S+ VG+AL+DMY K ++ R+F ++ WTAIIS + G +E + FKE
Sbjct: 377 VSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKE 436
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG 508
M + V D TF S L + G+ L S+++ + S S +VDM G
Sbjct: 437 MNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIR-LGLLSSVFSGSVLVDMYANCG 495
Query: 509 RLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
+++A E+ ++P + +L+ A +G+ E
Sbjct: 496 SMKDAIEVFKEMPDR-NIVCWNALISAYSQNGDAE 529
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
S N +++ Y + ++ + ++F+ + R +SW +I GY+QN A + + +
Sbjct: 78 SSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRS 137
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+ TF ++L+ G + +LK + HSHII+ G + IV ++L+D Y K +
Sbjct: 138 GVKPDHITFATLLS--GFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLD 195
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
+ ++F+E K ++ +I+ ++G E + F +M N +P TF ++L
Sbjct: 196 IASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAML 251
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-LSFALRMNLI--GVVFDA 57
++MY G A+ +F + + +IV WN ++S + ++ DA +F+ ++I G+ D+
Sbjct: 488 VDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDS 547
Query: 58 VTYSTALSFCLDHEGFLFG--LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
V++ + L+ C H G + +S+ + LD +I + R GR EA +
Sbjct: 548 VSFLSVLTAC-SHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLI 606
Query: 116 DEMP-NKDSVSWNAILSG 132
EMP D V W+++L+
Sbjct: 607 SEMPFEPDEVMWSSVLNS 624
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 219/669 (32%), Positives = 381/669 (56%), Gaps = 30/669 (4%)
Query: 3 MYCKSGQFDKALCIFNNL-NNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAV 58
MY K + A +F+ + D+VSWN+++S + +S +AL M + +
Sbjct: 260 MYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTY 319
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ AL C D G+ +H+ ++K V+V NALI MY+R+G++ EA +F M
Sbjct: 320 TFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNM 379
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+ D++SWN++LSG+ Q+G Y EA+ EM G + D V+ S +A N G
Sbjct: 380 DDWDTISWNSMLSGFVQNGLYH-EALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNG 438
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED 238
QIH ++K G + + VGN L+ Y+K + +F +M D++V+SWTT+I+ + ++
Sbjct: 439 MQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQN 498
Query: 239 -----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
A+ LF+E++L+G+ + + ++ A S L+ + IH I+ LS+ +
Sbjct: 499 GSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG-LSDLVLQ 557
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-- 351
N ++ +Y ++ + ++F+ + ++++SW ++IS Y NGL+ A++ F ++KE+
Sbjct: 558 NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALE-LFHLMKETGV 616
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P++ + S+L+A + +LK G+ H +I+ G + + S L+DMY + G++ +S
Sbjct: 617 EPDSISLVSILSAAASLS--ALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKS 674
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VFN + K WT++I+A HG + ++ F+ ME++ + PD I F++VL C +
Sbjct: 675 RNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHS 734
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++++GR +SM +Y +EP P+HY C+VD+LGR LEEA + V + P V +
Sbjct: 735 GLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCA 794
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGAC+IH N E+GE A L++M+P G+YVL+SN+YA + W+ V +R MK+ G+
Sbjct: 795 LLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGL 854
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY----RMAECLGSEMKYL--------N 639
+K G SW +VG + +H F + D +HP+S EIY ++ E L E Y+ N
Sbjct: 855 KKNPGCSWIEVG--NKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHN 912
Query: 640 SKRERAIAL 648
+K E + +
Sbjct: 913 AKEEEKVQM 921
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/419 (32%), Positives = 234/419 (55%), Gaps = 13/419 (3%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHS-LIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
YS+ L C + G Q+H+ +I L + V++ L+ MY + G LV+A ++FD
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 175
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP+K +WNA++ Y +G+ + ++ EM G+ LD +F ACG K+
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGE-PLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRC 234
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMISMNR 236
G ++HG++IK GY + V V N ++ Y+KC A ++F RM ++ +V+SW +MIS
Sbjct: 235 GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYS 294
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+A+ LF EM+ + PN TF+ + A + +K+G IH +K+++
Sbjct: 295 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 354
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI MYARF M ++ +F + + ISWN+++SG+ QNGL A+Q F+ ++++
Sbjct: 355 VANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQ-FYHEMRDA 413
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+ S++ A +A + +G + H++ +K GLDSD VG++L+DMY K S+
Sbjct: 414 GQKPDLVAVISIIAA--SARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMK 471
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+F++ +K +WT II+ A++G + + F+E++ +G+ D + S+L C
Sbjct: 472 YMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLAC 530
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 189/374 (50%), Gaps = 21/374 (5%)
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST-----YSKCEVTGDANK 215
+++S CG +K L G+Q+H I ++ +V +ST Y KC DA K
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMIT----SNALFNSVFLSTRLVFMYGKCGCLVDAEK 171
Query: 216 VFRRMHDRNVISWTTMIS---MNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
+F M + + +W MI N E ++ L++EMR+ G+ + TF ++ A +
Sbjct: 172 LFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKD 231
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE-IISWNALIS 329
+ G +HGL IK ++S V N ++ MY + + + ++FD + +E ++SWN++IS
Sbjct: 232 RRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMIS 291
Query: 330 GYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVG 387
Y+ NG S+ A++ F + K S PN YTF + A+ A ED S +K G H+ ++K
Sbjct: 292 AYSSNGQSIEALRLFGEMQKASLAPNTYTF---VAALQACEDSSFIKQGMFIHATVLKSS 348
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+ V +AL+ MY + G + E+ +F + +W +++S ++G Y + +
Sbjct: 349 YYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYH 408
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
EM + G +PD + +S++ R+G G + +K+ ++ + +VDM +
Sbjct: 409 EMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKN-GLDSDLQVGNSLVDMYAKF 467
Query: 508 GRLEEAEELVGQIP 521
++ + + ++P
Sbjct: 468 CSMKYMDCIFDKMP 481
>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 219/637 (34%), Positives = 363/637 (56%), Gaps = 21/637 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDAVTYSTALSFCLDHEG 72
+F ++ D+++WNT++S + K++ + + L+ G+ V++
Sbjct: 56 VFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVGD 115
Query: 73 FLFGLQLHSLIVKFGLD--SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL 130
F L+ +++K G + ++++V ++ I+MY+ G L R+VFD K + WN ++
Sbjct: 116 FKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMI 175
Query: 131 SGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
G+ Q+ + L L M + LD V+F SA +A + L LG+Q+H ++K
Sbjct: 176 GGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHT 235
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MN--REDAVSLFKE 245
V+V N ++ YS+C + +VF +M +++V+SW TMIS N E+ + L E
Sbjct: 236 VLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYE 295
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
M+ G + VT L+ A S + G+ H I+ + + + LI MYA+
Sbjct: 296 MQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHG-IKFDGMDSYLIDMYAKSGL 354
Query: 306 MQDSEKVFDE--LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVL 362
++ S++VF+ + R+ +WNA+I+GY QNGL A F +++++ +PNA T S+L
Sbjct: 355 IRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASIL 414
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
A + I+L G++ H I+ LD + V +AL+DMY K G+I ++ VF ++ E++
Sbjct: 415 PACSSLGSINL--GKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERN 472
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
+T +I +HG E+ ++ F M+ G++PD+ITF++VL+ C G++ +G +F+
Sbjct: 473 SVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFE 532
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI-PGGPGLSVLQSLLGACRIHGN 541
SM +D+ I+PS HY C+ DMLGRVGR+ EA E V Q+ G + + SLLGACR+HG+
Sbjct: 533 SMKRDFKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHGH 592
Query: 542 VEMGERIADALMKMEPAG--SGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSW 599
+E+GE +++ L++M +G VL+SN+YAE+ +WE V LRK M+ KG+RKEVG SW
Sbjct: 593 IELGEEVSNRLLEMNSVDRLAGYQVLLSNMYAEEANWETVDKLRKSMREKGLRKEVGCSW 652
Query: 600 ADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
D G + L F S D H R EEIY M E L EM+
Sbjct: 653 IDTGGL--LVRFVSKDKDHTRCEEIYEMLERLAMEME 687
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 237/468 (50%), Gaps = 22/468 (4%)
Query: 103 SRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSF 162
SR RL+ +VF M +D ++WN ++S Y + Y VEAI MM+ G++ VSF
Sbjct: 47 SRLSRLLH--KVFKTMHKRDVIAWNTMVSWYVKTERY-VEAIRQFRLMMKWGIKPSPVSF 103
Query: 163 TSAASACGHEKNLELGKQIHGVSIKMG--YGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+ A + + ++G+ +K+G Y + V + +S Y++ KVF
Sbjct: 104 VNVFPAISSVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSC 163
Query: 221 HDRNVISWTTMISMNRE-----DAVSLF-KEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+++ W TMI + + + V LF + M+ + +DVTF+ + A+S + G
Sbjct: 164 LEKSAEVWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLG 223
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
+ +H +K + + +V N ++ MY+R S+Q S +VF+++ ++++SWN +ISG+ QN
Sbjct: 224 QQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQN 283
Query: 335 GLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
GL + + + K+ ++ T S+L+A + + G++ H+++I+ G+ D +
Sbjct: 284 GLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNREI--GKQTHAYLIRHGIKFDGM 341
Query: 394 VGSALLDMYGKRGSIFESQRVF--NETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
S L+DMY K G I SQRVF N Q + + W A+I+ ++G E F+ M
Sbjct: 342 -DSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLE 400
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
+ +RP+++T S+L C G I+ G+ L ++ Y ++ + + +VDM + G +
Sbjct: 401 QNLRPNAVTLASILPACSSLGSINLGKQLHGVSIR-YSLDQNIFVRTALVDMYSKSGAIN 459
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
AE + Q ++ +LG +G MGE M+ +G
Sbjct: 460 YAESVFTQSSERNSVTYTTMILG----YGQHGMGENALSLFHSMKKSG 503
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 220/468 (47%), Gaps = 24/468 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS----FALRMNLIGVVFD 56
++MY + G D +F++ WNT++ G +++ L F M + D
Sbjct: 144 ISMYAELGCLDLCRKVFDSCLEKSAEVWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILD 203
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT+ +AL+ + G Q+H+ +K V V NA++ MYSR + + VF+
Sbjct: 204 DVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFE 263
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+MP KD VSWN ++SG+ Q+G E ++ + EM ++G D V+ TS SA + +N E
Sbjct: 264 KMPEKDVVSWNTMISGFIQNG-LDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNRE 322
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR--RMHDRNVISWTTMISM 234
+GKQ H I+ G + + L+ Y+K + + +VF + +R+ +W +I+
Sbjct: 323 IGKQTHAYLIRHGIKFD-GMDSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAG 381
Query: 235 NR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
E A F+ M + PN VT ++ A S + G+ +HG+ I+ +
Sbjct: 382 YTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQN 441
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V L+ MY++ ++ +E VF + S R +++ +I GY Q+G+ A+ F + K
Sbjct: 442 IFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKK 501
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRG 406
+P+A TF +VL+A A + G R +K P + DM G+ G
Sbjct: 502 SGIQPDAITFVAVLSACSYAGLVD--EGLRIFES-MKRDFKIQPSTAHYCCVADMLGRVG 558
Query: 407 SIFESQRVFNETQEKSEF--AWTAIISALARHGDY---ESVMNQFKEM 449
+ E+ + E+ W +++ A HG E V N+ EM
Sbjct: 559 RVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHGHIELGEEVSNRLLEM 606
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 212/649 (32%), Positives = 359/649 (55%), Gaps = 19/649 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKSD---DALS-FALRMNLIGVVF 55
+N+Y +D A C+F+N+ NP +I WN +++G+ K+ +AL F ++ +
Sbjct: 45 INLYLSCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKP 104
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D+ TY + L C ++ G +H+ +VK GL ++ VG++L+ MY++ +A +F
Sbjct: 105 DSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLF 164
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+EMP KD WN ++S Y Q G++ EA+ M R G + V+ T+A S+C +L
Sbjct: 165 NEMPEKDVACWNTVISCYYQSGNFK-EALEYFGLMRRFGFEPNSVTITTAISSCARLLDL 223
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G +IH I G+ + + L+ Y KC A +VF +M + V++W +MIS
Sbjct: 224 NRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGY 283
Query: 236 --REDAVS---LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ D++S LFK M +GV P T LI S + EG+ +HG I+ S+
Sbjct: 284 GLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDV 343
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ + L+ +Y + ++ +E +F + +++SWN +ISGY G A+ F +++
Sbjct: 344 FINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEAL-GLFSEMRK 402
Query: 351 S--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S +P+A TF SVL A ++ +L+ G+ H+ II+ LD++ +V ALLDMY K G++
Sbjct: 403 SYVEPDAITFTSVLTA--CSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAV 460
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E+ VF ++ +WT++I+A HG + F EM ++PD +TFL++L+ C
Sbjct: 461 DEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSAC 520
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG-GPGLS 527
G G++ +G + F+ M+ Y I P +HYSC++D+LGR GRL EA E++ Q P +
Sbjct: 521 GHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVE 580
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+L +L ACR+H N+++G IA L+ +P S +Y+L+SN+YA W+ V ++R MK
Sbjct: 581 LLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMK 640
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G++K G SW ++ + F DN+H E +++ L M+
Sbjct: 641 ELGLKKNPGCSWIEIN--QKILPFFVEDNSHLHLELVFKCLSYLSDHME 687
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 138/268 (51%), Gaps = 8/268 (2%)
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL- 316
+ L+ A +K+G++IH + ++ +C LI +Y ++ VFD +
Sbjct: 6 LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNME 65
Query: 317 -SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISL 373
C EI WN L++GY +N + + A++ F ++ KP++YT+ SVL A G L
Sbjct: 66 NPC-EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVL 124
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
G+ H+ ++K GL D +VGS+L+ MY K + ++ +FNE EK W +IS
Sbjct: 125 --GKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCY 182
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
+ G+++ + F M G P+S+T + ++ C R +++G + + ++ + S
Sbjct: 183 YQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDS 242
Query: 494 PDHYSCMVDMLGRVGRLEEAEELVGQIP 521
S +VDM G+ G LE A E+ Q+P
Sbjct: 243 FIS-SALVDMYGKCGHLEMAIEVFEQMP 269
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 212/655 (32%), Positives = 364/655 (55%), Gaps = 15/655 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y KSG A +F+++ +V+W ++ G+ + + +A + M G+V D +T
Sbjct: 83 YLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITL 142
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+T LS + E Q+H +VK G DS + V N+L+ Y + L A +F M
Sbjct: 143 ATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAE 202
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
KD+V++NA+L+GY+++G + +AI +M G R +F + +A ++E G+Q
Sbjct: 203 KDNVTFNALLTGYSKEG-FNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQ 261
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----N 235
+H +K + +V V N L+ YSK + +A K+F M + + IS+ +I+
Sbjct: 262 VHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGR 321
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
E+++ LF+E++ F L+ + ++ GR IH I T+ +SE V N
Sbjct: 322 VEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNS 381
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
L+ MYA+ + ++ ++F +L+ + + W ALISGY Q GL ++ F + + +
Sbjct: 382 LVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGAD 441
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
+ T+ S+L A ++L G++ HS II+ G S+ GSAL+DMY K GSI E+ ++
Sbjct: 442 SATYASILRACANLASLTL--GKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQM 499
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F E ++ +W A+ISA A++GD + F++M + G++P+S++FLS+L C G++
Sbjct: 500 FQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLV 559
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+G F+SM + Y +EP +HY+ MVDML R GR +EAE+L+ ++P P + S+L
Sbjct: 560 EEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILN 619
Query: 535 ACRIHGNVEMGERIADALMKMEP-AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
+CRIH N E+ + AD L M+ + YV MSN+YA G+W+ V ++K ++ +G+RK
Sbjct: 620 SCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRK 679
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+SW ++ H FS+ D +HP+++EI R + L +M+ K + AL
Sbjct: 680 VPAYSWVEIK--QKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCAL 732
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 254/486 (52%), Gaps = 20/486 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ YCK+ A +F ++ D V++N +L+G+ K + DA++ +M +G
Sbjct: 181 LDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSE 240
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L+ + + FG Q+HS +VK V+V NAL+ YS+ R+VEAR++F E
Sbjct: 241 FTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYE 300
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA--SACGHEKNL 175
MP D +S+N +++ +G VE L L + + R D F A S + NL
Sbjct: 301 MPEVDGISYNVLITCCAWNGR--VEESLELFREL-QFTRFDRRQFPFATLLSIAANSLNL 357
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E+G+QIH +I + V VGN L+ Y+KC+ G+AN++F + ++ + WT +IS
Sbjct: 358 EMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGY 417
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
ED + LF EM + + T+ ++ A + + G+ +H I++ LS
Sbjct: 418 VQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNV 477
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ L+ MYA+ S++++ ++F E+ R +SWNALIS YAQNG A+++F +I
Sbjct: 478 FSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHS 537
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSI 408
+PN+ +F S+L A + + G + + + +V L+ ++++DM + G
Sbjct: 538 GLQPNSVSFLSILCACSHCGLV--EEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRF 595
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMEN-KGVRPDSITFLSVLT 466
E++++ E E W++I+++ H + E + ++ N KG+R D+ ++S+
Sbjct: 596 DEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLR-DAAPYVSMSN 654
Query: 467 VCGRNG 472
+ G
Sbjct: 655 IYAAAG 660
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 235/475 (49%), Gaps = 39/475 (8%)
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG-- 140
++K G D N + + + G L AR++FDEMP+K+ +S N ++ GY + G+
Sbjct: 33 MIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTA 92
Query: 141 ----------------------------VEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+EA +M R G+ DH++ + S
Sbjct: 93 RSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEF 152
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+++ Q+HG +K+GY + + V N L+ +Y K G A +F+ M +++ +++ ++
Sbjct: 153 ESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALL 212
Query: 233 S-MNRE----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ ++E DA++LF +M+ G P++ TF ++ A + ++ G+ +H +K NF+
Sbjct: 213 TGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFV 272
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
V N L+ Y++ + + ++ K+F E+ + IS+N LI+ A NG +++ F +
Sbjct: 273 WNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFREL 332
Query: 348 -IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ F ++L+ AA ++L+ G++ HS I S+ +VG++L+DMY K
Sbjct: 333 QFTRFDRRQFPFATLLSI--AANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCD 390
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
E+ R+F + +S WTA+IS + G +E + F EM + DS T+ S+L
Sbjct: 391 KFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILR 450
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
C + G+ L +++ + + S +VDM + G ++EA ++ ++P
Sbjct: 451 ACANLASLTLGKQLHSRIIRSGCLS-NVFSGSALVDMYAKCGSIKEALQMFQEMP 504
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 214/648 (33%), Positives = 360/648 (55%), Gaps = 21/648 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
MY K G AL +F+ + +P+ VSW +++ F ++ +AL + RM L G+ D
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+ A+ C + G LH++I++ L + ++ +G ALITMY+R L AR+ FDEM
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 119 PNKDSVSWNAILSGYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
K V+WNA+++GY+++GD+ ++ ++ +G++ D ++F+SA AC ++
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G++I ++ GY + V N L++ YSKC A KVF R+ +R+VI+W TMIS
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ A+ LF+ M + PN VTFIGL+ A + +++GR IH + + S+
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300
Query: 292 VCNCLITMYARFES-MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ N L+ MY + S ++++ +VF+ + R++I+WN LI Y Q G + A+ F + E
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ PN T +VL+A + + G+ H+ I +D ++ ++L++MY + GS+
Sbjct: 361 NVAPNEITLSNVLSACAVLG--AKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLD 418
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ VF ++KS +W+ +I+A A+HG + + F E+ +G+ D +T +S L+ C
Sbjct: 419 DTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS 478
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
GM+ +G F SM+ D+ + P H+ CMVD+L R GRLE AE L+ +P P
Sbjct: 479 HGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAW 538
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYV-LMSNLYAEKGDWEMVAILRKGMKS 588
SLL C++H + + R+AD L ++E S V L+SN+YAE G W+ V RK
Sbjct: 539 TSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDV---RKTRNR 595
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ RK G S+ ++ D +H F +GD +HP E I + L +MK
Sbjct: 596 RAARKNPGCSYIEINDT--VHEFVAGDKSHPEEELIAAEIKRLSKQMK 641
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 139/498 (27%), Positives = 259/498 (52%), Gaps = 23/498 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLI-----GVV 54
+ MY + + A F+ + +V+WN +++G+ ++ D + + +++ G+
Sbjct: 101 ITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMK 160
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
DA+T+S+AL C G ++ + V G S+ V NALI MYS+ G L AR+V
Sbjct: 161 PDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKV 220
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD + N+D ++WN ++SGY + G +A+ M + + V+F +AC + ++
Sbjct: 221 FDRLKNRDVIAWNTMISGYAKQG-AATQALELFQRMGPNDPKPNVVTFIGLLTACTNLED 279
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT-GDANKVFRRMHDRNVISWTTMIS 233
LE G+ IH + GY + + +GNVL++ Y+KC + +A +VF RM R+VI+W +I
Sbjct: 280 LEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIV 339
Query: 234 M-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+DA+ +FK+M+L+ V PN++T ++ A ++ ++G+ +H L +
Sbjct: 340 AYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKA 399
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ + N L+ MY R S+ D+ VF + + ++SW+ LI+ YAQ+G S ++ F+ ++
Sbjct: 400 DVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELL 459
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHG-QRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+E + T S L+A + LK G Q S + GL D ++D+ + G
Sbjct: 460 QEGLAADDVTMVSTLSA--CSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAG 517
Query: 407 SIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE---SVMNQFKEMENKGVRPDSITFL 462
+ ++ + ++ AWT+++S H D + V ++ E+E++ ++T L
Sbjct: 518 RLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESED-EHSTVTLL 576
Query: 463 S-VLTVCGRNGMIHKGRH 479
S V GR + K R+
Sbjct: 577 SNVYAEAGRWDDVRKTRN 594
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 215/654 (32%), Positives = 363/654 (55%), Gaps = 32/654 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+++Y G A+ +F + D+VSWN ++ +S D AL RM L GV
Sbjct: 170 LHIYGSCGCVASAMLLFEKMER-DLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPAR 228
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T AL+ C +H ++ + GL+ + V AL + Y+R G L +A+ VFD
Sbjct: 229 ITLVIALTVCAT---IRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDR 285
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+D VSWNA+L Y Q G EA L M+ +G+ V+ +A++ C +L
Sbjct: 286 AAERDVVSWNAMLGAYAQHGHMS-EAALLFARMLHEGISPSKVTLVNASTGC---SSLRF 341
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+ IHG +++ G + +GN L+ Y++C +A +F+R+ N +SW TMI+ + +
Sbjct: 342 GRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI-PCNAVSWNTMIAGSSQ 400
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISI----GNLVKEGRMIHGLCIKTNFLS 288
AV LF+ M+L+G+ P T++ L+ A++ + EGR +H + + S
Sbjct: 401 KGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYAS 460
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCRE---IISWNALISGYAQNGLSLAAVQAFF 345
EP++ ++ MYA ++ ++ F + + ++SWNA+IS +Q+G A+ F
Sbjct: 461 EPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFR 520
Query: 346 GV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ + PN T +VL+A A +L G+ H H+ G++S+ V +AL MYG+
Sbjct: 521 RMDLHGVAPNQITCVAVLDACAGAA--ALTEGEIVHDHLRHSGMESNLFVATALASMYGR 578
Query: 405 RGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
GS+ ++ +F + E+ + A+I+A +++G + F M+ +G RPD +F+S
Sbjct: 579 CGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVS 638
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL+ C G+ +G +F SM + Y I PS DHY+C VD+LGR G L +AEEL+ +
Sbjct: 639 VLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVK 698
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMK-MEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
P + V ++LLGACR + +V+ G R+A+++++ ++P +YV++SN+ A G W+ A +
Sbjct: 699 PTVLVWKTLLGACRKYRDVDRG-RLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEV 757
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
R M+S+G+RKE G SW ++ +H F +GD +HPRSEEIYR E L +E++
Sbjct: 758 RTEMESRGLRKEAGKSWIEIK--SRVHEFVAGDRSHPRSEEIYRELERLHAEIR 809
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 267/549 (48%), Gaps = 24/549 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+ +Y K +F+ L D SW T+++ + ++ A+ RM GV DA
Sbjct: 69 LRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDA 128
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ L C G +H+ IV+ GL + + N L+ +Y G + A +F++
Sbjct: 129 VTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEK 188
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSWNA ++ Q GD G+ A+ M +G+R ++ A + C +
Sbjct: 189 M-ERDLVSWNAAIAANAQSGDLGI-ALELFQRMQLEGVRPARITLVIALTVCA---TIRQ 243
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
+ IH + + G + V L S Y++ A +VF R +R+V+SW M+ +
Sbjct: 244 AQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQ 303
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A LF M +G+ P+ VT L++A + + ++ GRMIHG ++ + +
Sbjct: 304 HGHMSEAALLFARMLHEGISPSKVT---LVNASTGCSSLRFGRMIHGCALEKGLDRDIVL 360
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ MY R S +++ +F + C +SWN +I+G +Q G AV+ F + E
Sbjct: 361 GNALLDMYTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGM 419
Query: 352 KPNAYTFGSVLNAVGA--AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P T+ ++L AV + E ++ G++ HS I+ G S+P +G+A++ MY G+I
Sbjct: 420 APVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAID 479
Query: 410 ESQRVFNETQEKSE---FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
E+ F + +W AIIS+L++HG + + F+ M+ GV P+ IT ++VL
Sbjct: 480 EAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLD 539
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C + +G + D L+ +E + + + M GR G LE A E+ ++ +
Sbjct: 540 ACAGAAALTEGEIVHDH-LRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDV 598
Query: 527 SVLQSLLGA 535
+ +++ A
Sbjct: 599 VIFNAMIAA 607
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 227/449 (50%), Gaps = 26/449 (5%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G ++H+ IV GL+ E+ GN L+ +Y + L + VF + +D SW I++ YT+
Sbjct: 48 GRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTE 105
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
G AI M ++G+R D V+F + AC +L G+ IH ++ G
Sbjct: 106 HGQ-AKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSV 164
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDG 250
+ N+L+ Y C A +F +M +R+++SW I+ N + A+ LF+ M+L+G
Sbjct: 165 LANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEG 223
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V P +T L+ A+++ +++ + IH + ++ V L + YAR + ++
Sbjct: 224 VRPARIT---LVIALTVCATIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAK 280
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAE 369
+VFD + R+++SWNA++ YAQ+G A F ++ E P+ T +NA
Sbjct: 281 EVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTL---VNASTGCS 337
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL+ G+ H ++ GLD D ++G+ALLDMY + GS E++ +F + +W +
Sbjct: 338 --SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPCNA-VSWNTM 394
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG----MIHKGRHLFDSML 485
I+ ++ G + + F+ M+ +G+ P T+L++L N + +GR L ++
Sbjct: 395 IAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIV 454
Query: 486 K-DYHIEPSPDHYSCMVDMLGRVGRLEEA 513
Y EP+ + +V M G ++EA
Sbjct: 455 SCGYASEPAIG--TAVVKMYASCGAIDEA 481
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 178/362 (49%), Gaps = 22/362 (6%)
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
A G ++ L G++IH + +G +GN L+ Y KCE GD +VF R+ R+ S
Sbjct: 38 AAGDDRLLSQGRRIHARIVSLGL--EEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEAS 95
Query: 228 WTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
WTT+I+ E A+ +F M+ +GV + VTF+ ++ A + + +GR IH +
Sbjct: 96 WTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIV 155
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
++ + + N L+ +Y + + +F+++ R+++SWNA I+ AQ+G A++
Sbjct: 156 ESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALE 214
Query: 343 AFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F + E +P T L +++ Q H + + GL+ +V +AL
Sbjct: 215 LFQRMQLEGVRPARITLVIALTVCA-----TIRQAQAIHFIVRESGLEQTLVVSTALASA 269
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y + G +++++ VF+ E+ +W A++ A A+HG F M ++G+ P +T
Sbjct: 270 YARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTL 329
Query: 462 LSVLTVCG--RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
++ T C R G + G L + +D + + ++DM R G EEA L +
Sbjct: 330 VNASTGCSSLRFGRMIHGCALEKGLDRDIVLG------NALLDMYTRCGSPEEARHLFKR 383
Query: 520 IP 521
IP
Sbjct: 384 IP 385
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 218/617 (35%), Positives = 348/617 (56%), Gaps = 20/617 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFALRMNLIG---VVFDAVT 59
Y G A +F+ L + +N ++ + K D + + + ++G D T
Sbjct: 65 YAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYT 124
Query: 60 YSTALSFCLDHEGFLFGLQLH--SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y + C + +G LH +L+ KFG S ++V N+L+ MY G + EAR+VFD
Sbjct: 125 YPFVIKACSELLLVEYGRVLHGLTLVSKFG--SHLFVLNSLLAMYMNCGEVEEARKVFDA 182
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K VSWN +++GY ++G + A++ +M+ G+ +D S S ACG+ K LE+
Sbjct: 183 MKEKSVVSWNTMINGYFKNG-FANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEV 241
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+++HG+ + G + V N L+ Y+KC +A VF M +R+V+SWT+MI+
Sbjct: 242 GRRVHGLVEEKVLGKKI-VSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYIL 300
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + A+SLFK M+++G+ PN VT ++ A + N +K+GR +HG +K SE +V
Sbjct: 301 NGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAV 360
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
LI MYA+ + S VF S ++ + WNAL+SG N L+ A+ F ++ E
Sbjct: 361 ETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGV 420
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ NA T S+L A G D L+ +S++++ G S+ V ++L+D+Y K GS+ +
Sbjct: 421 EINAATCNSLLPAYGILAD--LQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESA 478
Query: 412 QRVFNETQEKSE--FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++FN + F W+ II+ HG E+ ++ FK+M GV+P+ +TF SVL C
Sbjct: 479 HKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCS 538
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
GM+ G +LF MLKD+ P+ DHY+CMVD+LGR GR++EA +L+ +P PG +V
Sbjct: 539 HAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVW 598
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+LLGAC +H NVE+GE A L ++EP +G+YVL++ LYA G WE +R+ M
Sbjct: 599 GALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDI 658
Query: 590 GVRKEVGFSWADVGDID 606
G+RK S + G ++
Sbjct: 659 GLRKAPAHSLIEAGTVN 675
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 234/451 (51%), Gaps = 13/451 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLH+ ++ GL S + + + L+ Y+ G + AR++FDE+ + ++ +N ++ Y G
Sbjct: 42 QLHAHLITSGLLS-IDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKG 100
Query: 138 DYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
DY EA+ +EM+ K D+ ++ AC +E G+ +HG+++ +G+H+ V
Sbjct: 101 DY-FEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFV 159
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGV 251
N L++ Y C +A KVF M +++V+SW TMI+ ++ A+ +F +M GV
Sbjct: 160 LNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGV 219
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
+ + + ++ A ++ GR +HGL ++ L + V N L+ MYA+ SM ++
Sbjct: 220 EIDGASVVSVLPACGYLKELEVGRRVHGL-VEEKVLGKKIVSNALVDMYAKCGSMDEARL 278
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAF-FGVIKESKPNAYTFGSVLNAVGAAED 370
VFD + R+++SW ++I+GY NG + +A+ F I+ +PN+ T +L A + +
Sbjct: 279 VFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNN 338
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
LK G+ H ++K L S+ V ++L+DMY K + S VF T K W A++
Sbjct: 339 --LKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALL 396
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
S + + FK+M +GV ++ T S+L G + ++ +++ +
Sbjct: 397 SGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFV 456
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ + ++D+ + G LE A ++ IP
Sbjct: 457 S-NIQVATSLIDIYSKCGSLESAHKIFNTIP 486
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 257/534 (48%), Gaps = 64/534 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY G+ ++A +F+ + +VSWNT+++G+ K ++ AL +M GV D
Sbjct: 164 LAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDG 223
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + L C + G ++H L+ + L ++ V NAL+ MY++ G + EAR VFD
Sbjct: 224 ASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI-VSNALVDMYAKCGSMDEARLVFDN 282
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M +D VSW ++++GY +GD ++ L+L ++M+ +GLR + V+ AC NL+
Sbjct: 283 MVERDVVSWTSMINGYILNGD--AKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLK 340
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+ +HG +K + V+V L+ Y+KC G + VF R + + W ++S
Sbjct: 341 DGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCV 400
Query: 234 MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N+ +A+ LFK+M ++GV N T L+ A I ++ I+ +++ F+S
Sbjct: 401 HNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQ 460
Query: 292 VCNCLITMYARFESMQDSEKVFDELS--CREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V LI +Y++ S++ + K+F+ + ++I W+ +I+GY +G AV F +++
Sbjct: 461 VATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQ 520
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGS 407
KPN TF SVL Q C H+ ++ GL Y +
Sbjct: 521 SGVKPNDVTFTSVL--------------QSCSHAGMVDDGL-------------YLFKFM 553
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ + Q + N+ +T ++ L R G + + K M P + ++L
Sbjct: 554 LKDHQTIPNDDH------YTCMVDLLGRAGRMDEAYDLIKTMP---FMPGHAVWGALLGA 604
Query: 468 CGRNGMIHKG----RHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVGRLEEAEEL 516
C + + G R LF+ +EP + +Y + + +GR E+AE +
Sbjct: 605 CVMHENVELGEVAARWLFE-------LEPGNTGNYVLLAKLYAALGRWEDAENV 651
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 215/656 (32%), Positives = 352/656 (53%), Gaps = 20/656 (3%)
Query: 7 SGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLI--GVVFDAVTYS 61
+G A +F+ + + DIVSW +++ + SD+AL M ++ V D S
Sbjct: 53 AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS 112
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
L C +G LH+ VK L S VYVG++L+ MY R G++ ++ RVF EMP +
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR 172
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
++V+W AI++G G Y E + EM R D +F A AC + ++ GK I
Sbjct: 173 NAVTWTAIITGLVHAGRYK-EGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE---- 237
H I G+ T + V N L + Y++C D +F M +R+V+SWT++I +
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291
Query: 238 -DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
AV F +MR V PN+ TF + A + + + G +H + SV N +
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSM 351
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPN 354
+ MY+ ++ + +F + CR+IISW+ +I GY Q G + +F +++S KP
Sbjct: 352 MKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFK-YFSWMRQSGTKPT 410
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
+ S+L+ G I + G++ H+ + GL+ + V S+L++MY K GSI E+ +
Sbjct: 411 DFALASLLSVSGNMAVI--EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F ET + TA+I+ A HG + ++ F++ G RPDS+TF+SVLT C +G +
Sbjct: 469 FGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQL 528
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
G H F+ M + Y++ P+ +HY CMVD+L R GRL +AE+++ ++ V +LL
Sbjct: 529 DLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLI 588
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
AC+ G++E G R A+ +++++P + + V ++N+Y+ G+ E A +RK MK+KGV KE
Sbjct: 589 ACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKE 648
Query: 595 VGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL--GSEMKYLNSKRERAIAL 648
G W+ + D + F SGD HP+SE+IY + E G+E + +RA +
Sbjct: 649 PG--WSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAVSGAEAHRFDCTLKRAFGV 702
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 225/452 (49%), Gaps = 16/452 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY + G+ DK+ +F+ + + V+W +++G + + L++ M+ + D
Sbjct: 150 LDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDT 209
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ AL C +G +H+ ++ G + + V N+L TMY+ G + + +F+
Sbjct: 210 YTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFEN 269
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSW +++ Y + G V+A+ I+M + + +F S SAC L
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQ-EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVW 328
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+Q+H + +G +SV N +M YS C A+ +F+ M R++ISW+T+I
Sbjct: 329 GEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQ 388
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E+ F MR G P D L+ +++ GR +H L + +V
Sbjct: 389 AGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTV 448
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LI MY++ S++++ +F E +I+S A+I+GYA++G S A+ F +K
Sbjct: 449 RSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGF 508
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIF 409
+P++ TF SVL A + + L + ++++ + P ++D+ + G +
Sbjct: 509 RPDSVTFISVLTACTHSGQLDLGFH---YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLS 565
Query: 410 ESQRVFNE-TQEKSEFAWTAIISALARHGDYE 440
+++++ NE + +K + WT ++ A GD E
Sbjct: 566 DAEKMINEMSWKKDDVVWTTLLIACKAKGDIE 597
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 352/627 (56%), Gaps = 22/627 (3%)
Query: 25 IVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHS 81
+ WNT+L + ++ L M D T AL C + +G +H
Sbjct: 6 LYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHG 65
Query: 82 LIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD-- 138
+ K L S++YVG++LI MY + GR++EA R+FDE+ D V+W++++SG+ ++G
Sbjct: 66 FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPY 125
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
VE ++ M + D V+ + SAC N LG+ +HG I+ G+ +S+ N
Sbjct: 126 QAVEFFRRMV--MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVN 183
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCP 253
L++ Y+K +A +F+ + +++VISW+T+I+ + +A+ +F +M DG P
Sbjct: 184 SLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEP 243
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
N T + ++ A + + +++GR H L I+ +E V L+ MY + S +++ VF
Sbjct: 244 NVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVF 303
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGAAEDI 371
+ ++++SW ALISG+ NG++ +++ F ++ E ++P+A VL G+ ++
Sbjct: 304 SRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVL---GSCSEL 360
Query: 372 SLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+C HS++IK G DS+P +G++L+++Y + GS+ + +VFN K WT++I
Sbjct: 361 GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLI 420
Query: 431 SALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
+ HG + F M ++ V+P+ +TFLS+L+ C G+IH+G +F M+ DY
Sbjct: 421 TGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYR 480
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
+ P+ +HY+ +VD+LGRVG L+ A E+ ++P P +L +LLGACRIH N EM E +A
Sbjct: 481 LAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVA 540
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
L ++E +G Y+LMSN+Y KG+WE V LR +K +G++K + S ++ +H
Sbjct: 541 KKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIR--RKVH 598
Query: 610 GFSSGDNTHPRSEEIYRMAECLGSEMK 636
F + D HP E +Y + + L MK
Sbjct: 599 RFVADDELHPEKEPVYGLLKELDLHMK 625
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 199/378 (52%), Gaps = 13/378 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIG-VVFDAV 58
MY K G+ +AL +F+ L PDIV+W++++SGFEK+ A+ F RM + V D V
Sbjct: 86 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 145
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T T +S C G +H +++ G +++ + N+L+ Y++ EA +F +
Sbjct: 146 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 205
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
KD +SW+ +++ Y Q+G EA+L +MM G + + AC +LE G
Sbjct: 206 AEKDVISWSTVIACYVQNGA-AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG 264
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MN 235
++ H ++I+ G T V V L+ Y KC +A VF R+ ++V+SW +IS +N
Sbjct: 265 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN 324
Query: 236 --REDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++ F M L+ P+ + + ++ + S +++ + H IK F S P +
Sbjct: 325 GMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI 384
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK--E 350
L+ +Y+R S+ ++ KVF+ ++ ++ + W +LI+GY +G A++ F ++K E
Sbjct: 385 GASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSE 444
Query: 351 SKPNAYTFGSVLNAVGAA 368
KPN TF S+L+A A
Sbjct: 445 VKPNEVTFLSILSACSHA 462
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 9/291 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+N Y KS F +A+ +F + D++SW+TV++ + ++ A L N + G +
Sbjct: 186 LNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNV 245
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T L C G + H L ++ GL++EV V AL+ MY + EA VF
Sbjct: 246 ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSR 305
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P KD VSW A++SG+T +G I ++ R D + +C LE
Sbjct: 306 IPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQ 365
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
K H IK G+ ++ +G L+ YS+C G+A+KVF + ++ + WT++I+
Sbjct: 366 AKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGI 425
Query: 234 -MNREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
A+ F M + V PN+VTF+ ++ A S L+ EG I L +
Sbjct: 426 HGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMV 476
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
++S + W ++ +L+R +E V+ F M +PD+ T L CG ++ G
Sbjct: 3 KRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEM 62
Query: 480 LFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
+ + KD + D Y S ++ M + GR+ EA + ++
Sbjct: 63 IHGFVKKD--VTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL 103
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 199/618 (32%), Positives = 341/618 (55%), Gaps = 15/618 (2%)
Query: 17 FNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGF 73
F+ + + WN +++ KS D ++ +M GV D+ T+S
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 74 LFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGY 133
G QLH I+K G VGN+L+ Y + R+ AR+VFDEM +D +SWN+I++GY
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 134 TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
+G + + ++M+ G+ +D + S + C + + LG+ +H + +K +
Sbjct: 121 VSNG-LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNRE----DAVSLFKEMRL 248
N L+ YSKC A VFR M DR+V+S+T+MI+ RE +AV LF+EM
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
+G+ P+ T +++ + L+ EG+ +H + + + V N L+ MYA+ SMQ+
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 299
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVG 366
+E VF E+ ++IISWN +I GY++N + A+ F +++E + P+ T VL A
Sbjct: 300 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 359
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
+ + G+ H +I++ G SD V ++L+DMY K G++ + +F++ K +W
Sbjct: 360 SLS--AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 417
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
T +I+ HG + + F +M G+ D I+F+S+L C +G++ +G F+ M
Sbjct: 418 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 477
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
+ IEP+ +HY+C+VDML R G L +A + +P P ++ +LL CRIH +V++ E
Sbjct: 478 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 537
Query: 547 RIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDID 606
++A+ + ++EP +G YVLM+N+YAE WE V LRK + +G+RK G SW ++
Sbjct: 538 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIK--G 595
Query: 607 GLHGFSSGDNTHPRSEEI 624
++ F +GD+++P +E I
Sbjct: 596 RVNIFVAGDSSNPETENI 613
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 141/552 (25%), Positives = 262/552 (47%), Gaps = 71/552 (12%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
Y K+ + D A +F+ + D++SWN++++G+ ++ LS ++M + G+ D T
Sbjct: 88 FYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLAT 147
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ + C D G +HS+ VK E N L+ MYS+ G L A+ VF EM
Sbjct: 148 IVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 207
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ VS+ ++++GY ++G G EA+ EM +G+ D + T+ + C + L+ GK
Sbjct: 208 DRSVVSYTSMIAGYAREGLAG-EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 266
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN- 235
++H + G + V N LM Y+KC +A VF M +++ISW T+I S N
Sbjct: 267 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 326
Query: 236 -REDAVSLF----KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+A+SLF +E R P++ T ++ A + + +GR IHG ++ + S+
Sbjct: 327 YANEALSLFNLLLEEKRFS---PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 383
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N L+ MYA+ ++ + +FD+++ ++++SW +I+GY +G A+ F
Sbjct: 384 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF------ 437
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + + G+++D I +LL G + E
Sbjct: 438 ------------------------------NQMRQAGIEADEISFVSLLYACSHSGLVDE 467
Query: 411 SQRVFNETQEKSEFA-----WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
R FN + + + + I+ LAR GD ++ ++ +EN + PD+ + ++L
Sbjct: 468 GWRFFNIMRHECKIEPTVEHYACIVDMLARTGD---LIKAYRFIENMPIPPDATIWGALL 524
Query: 466 TVCGRNGMIHKGRHLFDSML-KDYHIEP-SPDHYSCMVDMLGRVGRLEEAEEL---VGQ- 519
C IH L + + K + +EP + +Y M ++ + E+ + L +GQ
Sbjct: 525 CGC----RIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQR 580
Query: 520 -IPGGPGLSVLQ 530
+ PG S ++
Sbjct: 581 GLRKNPGCSWIE 592
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 217/437 (49%), Gaps = 23/437 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G D A +F +++ +VS+ ++++G+ + + +A+ M G+ D
Sbjct: 187 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 246
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L+ C + G ++H I + L +++V NAL+ MY++ G + EA VF E
Sbjct: 247 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 306
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL--DHVSFTSAASACGHEKNL 175
M KD +SWN I+ GY+++ Y EA L+L ++ + R D + AC
Sbjct: 307 MRVKDIISWNTIIGGYSKNC-YANEA-LSLFNLLLEEKRFSPDERTVACVLPACASLSAF 364
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
+ G++IHG ++ GY + V N L+ Y+KC A+ +F + ++++SWT MI+
Sbjct: 365 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 424
Query: 234 -MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
M+ ++A++LF +MR G+ ++++F+ L++A S LV EG + ++ EP
Sbjct: 425 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNI-MRHECKIEP 483
Query: 291 SVCN--CLITMYARFESMQDSEKVFDELSC-REIISWNALISG-YAQNGLSLAAVQAFFG 346
+V + C++ M AR + + + + + + W AL+ G + + LA A
Sbjct: 484 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 543
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
E + Y VL A AE + +R I + GL +P G + +++ G R
Sbjct: 544 FELEPENTGYY---VLMANIYAEAEKWEQVKRLRKRIGQRGLRKNP--GCSWIEIKG-RV 597
Query: 407 SIFESQRVFNETQEKSE 423
+IF + N E E
Sbjct: 598 NIFVAGDSSNPETENIE 614
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 209/632 (33%), Positives = 362/632 (57%), Gaps = 14/632 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
+Y +S + A IF+ +N+ D VS+N+++SG + SD AL +M + D +T
Sbjct: 305 LYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCIT 364
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++ LS C G+QLHS +K G+ +++ + +L+ +YS+ + A + F
Sbjct: 365 VASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTE 424
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ V WN +L Y Q + ++ +M +G+ + ++ S C L LG+
Sbjct: 425 TENIVLWNVMLVAYGQLDNLS-DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
QIH IK G+ +V V +VL+ Y+K A ++ RR+ + +V+SWT MI+ +
Sbjct: 484 QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD 543
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+ LF+EM G+ +++ F I A + +++G+ IH F ++ S+ N
Sbjct: 544 MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN 603
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKP 353
LI++YAR +Q++ F+++ + ISWN+L+SG AQ+G A+Q F +++ E++
Sbjct: 604 ALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEV 663
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N +T+GS ++A + +I K GQ+ HS ++K G DS+ V ++L+ +Y K GSI ++ R
Sbjct: 664 NMFTYGSAISAAASLANI--KQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWR 721
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
FN+ E++ +W A+I+ ++HG + F+EM+ G+ P+ +TF+ VL+ C G+
Sbjct: 722 EFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGL 781
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ +G F+SM K + + P +HY C+VD+LGR G+L+ A E + ++P + ++LL
Sbjct: 782 VKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLL 841
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
AC IH N+E+GER A L+++EP S +YVL+SN+YA W RK MK +GV+K
Sbjct: 842 SACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKK 901
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
E G SW +V + +H F +GD HP + +IY
Sbjct: 902 EPGRSWIEVK--NAVHAFYAGDKLHPLTNQIY 931
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 251/497 (50%), Gaps = 16/497 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K+G + A +FN + DIV+W ++SG ++ ++A+ M+ +
Sbjct: 202 IDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTP 261
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS + F G QLH L++K+G SE YV N L+ +YSR +L+ A R+F
Sbjct: 262 YVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFST 321
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++D VS+N+++SG Q G + A+ +M R L+ D ++ S SAC L
Sbjct: 322 MNSRDGVSYNSLISGLVQQG-FSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK 380
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G Q+H +IK G + + L+ YSKC A+K F N++ W M+
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQ 440
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N D+ +F++M+++G+ PN T+ ++ + + G IH IKT F V
Sbjct: 441 LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYV 500
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
C+ LI MYA++ + + ++ L +++SW A+I+GY Q+ + A+Q F +E +
Sbjct: 501 CSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLF----EEME 556
Query: 353 PNAYTFGSV--LNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
F ++ +A+ A I +L+ GQ+ H+ G +D + +AL+ +Y + G I
Sbjct: 557 YRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQ 616
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E+ F + +K+ +W +++S LA+ G +E + F M + T+ S ++
Sbjct: 617 EAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAA 676
Query: 470 RNGMIHKGRHLFDSMLK 486
I +G+ + +LK
Sbjct: 677 SLANIKQGQQIHSMVLK 693
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 236/478 (49%), Gaps = 13/478 (2%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
GV + Y L CL ++LH I K G D E + ++L+ Y R G A
Sbjct: 53 GVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGA 112
Query: 112 RRVFDEMPNKDSVSWNAILSGYT-QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC- 169
+VFDE N+ SWN ++ + Q ++ V + M+ +G+ + +F AC
Sbjct: 113 VKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFR--RMLAEGITPNGYTFAGVLKACV 170
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
G + KQ+H + G+ + V N+L+ YSK A KVF + +++++W
Sbjct: 171 GGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWV 230
Query: 230 TMIS---MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
MIS N E+A+ LF +M + P ++ A + L + G +H L IK
Sbjct: 231 AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKW 290
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
F SE VCN L+ +Y+R + +E++F ++ R+ +S+N+LISG Q G S A++ F
Sbjct: 291 GFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELF 350
Query: 345 FGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ ++ KP+ T S+L+A + +L G + HSH IK G+ +D I+ +LLD+Y
Sbjct: 351 TKMQRDCLKPDCITVASLLSACASVG--ALHKGMQLHSHAIKAGMSADIILEGSLLDLYS 408
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K + + + F T+ ++ W ++ A + + F++M+ +G+ P+ T+ S
Sbjct: 409 KCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPS 468
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+L C G ++ G + ++K + + S ++DM + G+L A ++ ++P
Sbjct: 469 ILRTCTSLGALYLGEQIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 164/282 (58%), Gaps = 9/282 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K GQ AL I L D+VSW +++G+ + D +AL M G+ FD
Sbjct: 505 IDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDN 564
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ +++A+S C G Q+H+ G +++ + NALI++Y+R GR+ EA F++
Sbjct: 565 IGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK 624
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +K+++SWN+++SG Q G Y EA+ + M+R ++ ++ SA SA N++
Sbjct: 625 IGDKNNISWNSLVSGLAQSG-YFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQ 683
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+QIH + +K GY + V N L+S Y+K DA + F M +RNVISW MI+ +
Sbjct: 684 GQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQ 743
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+A+ LF+EM++ G+ PN VTF+G++ A S LVKEG
Sbjct: 744 HGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEG 785
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 168/344 (48%), Gaps = 9/344 (2%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M +G+R ++ ++ C +L ++H K G+ + + L+ Y +
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 210 TGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
A KVF +R+V SW MI + + LF+ M +G+ PN TF G++ A
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168
Query: 265 ISIGNLV-KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
G++ + +H F S P V N LI +Y++ ++ ++KVF+ + ++I++
Sbjct: 169 CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVT 228
Query: 324 WNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
W A+ISG +QNGL A+ F + E P Y SVL+A + L G++ H
Sbjct: 229 WVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFEL--GEQLHCL 286
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
+IK G S+ V + L+ +Y + + ++R+F+ + ++ ++IS L + G +
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ F +M+ ++PD IT S+L+ C G +HKG L +K
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIK 390
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 134/304 (44%), Gaps = 11/304 (3%)
Query: 229 TTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
T + + + L M GV N ++ L+ + E +H K+ F
Sbjct: 32 TLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDG 91
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
EP + + L+ Y R + KVFDE S R + SWN +I + + F ++
Sbjct: 92 EPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRML 151
Query: 349 KES-KPNAYTFGSVLNA-VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
E PN YTF VL A VG DI+ + ++ HS G DS P+V + L+D+Y K G
Sbjct: 152 AEGITPNGYTFAGVLKACVGG--DIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNG 209
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I +++VFN K W A+IS L+++G E + F +M + P SVL+
Sbjct: 210 YIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLS 269
Query: 467 VCGRNGMIHKGRHLFDSMLK-DYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIPGG 523
+ + G L ++K +H E Y C +V + R +L AE + +
Sbjct: 270 ASTKIQLFELGEQLHCLVIKWGFHSET----YVCNGLVALYSRSRKLISAERIFSTMNSR 325
Query: 524 PGLS 527
G+S
Sbjct: 326 DGVS 329
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 212/637 (33%), Positives = 364/637 (57%), Gaps = 18/637 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFD 56
++MY K A +F+ +N D+VSWN+++S + + +AL M GV +
Sbjct: 52 VSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGAN 111
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T AL C D G+++H+ I+K +VYV NAL+ M+ R+G++ A R+FD
Sbjct: 112 TYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFD 171
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E+ KD+++WN++++G+TQ+G Y EA+ + L+ D VS S +A G L
Sbjct: 172 ELDEKDNITWNSMIAGFTQNGLYN-EALQFFCGLQDANLKPDEVSLISILAASGRLGYLL 230
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
GK+IH ++K +++ +GN L+ YSKC A VF +M ++++ISWTT+I+
Sbjct: 231 NGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYA 290
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +A+ L ++++ G+ + + + A S + + +HG +K LS+
Sbjct: 291 QNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG-LSDLM 349
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ N +I +YA ++ + ++F+ + C++++SW ++IS Y NGL+ A+ F+ ++KE+
Sbjct: 350 MQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFY-LMKET 408
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+P++ T S+L+A + ++ G+ H I + G + ++L+DMY GS+
Sbjct: 409 SVEPDSITLVSILSAAASLSALN--KGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLE 466
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ +VF T+ KS WT +I+A HG ++ + F ME++ + PD ITFL++L C
Sbjct: 467 NAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACS 526
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+G+I++G+ L ++M Y +EP P+HY+C+VD+LGR LEEA V + P V
Sbjct: 527 HSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVW 586
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+ LGACRIH N ++GE A L+ ++P GSYVL+SN++A G W+ V +R MK
Sbjct: 587 CAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGG 646
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
G++K G SW +VG + +H F D +HP S +IY+
Sbjct: 647 GLKKNPGCSWIEVG--NKVHTFLVRDKSHPESYKIYQ 681
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/501 (28%), Positives = 252/501 (50%), Gaps = 15/501 (2%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
M ++GV FD+ T+ L C E G ++H LI+K G DS V+V N+L++MY++
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 108 LVEARRVFDEMPNK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA 166
++ AR++FD M + D VSWN+I+S Y+ +G +EA+ EM + G+ + + +A
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQ-CMEALGLFREMQKAGVGANTYTLVAAL 119
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
AC +LG +IH +K V V N L++ + + A ++F + +++ I
Sbjct: 120 QACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNI 179
Query: 227 SWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+W +MI+ + +A+ F ++ + P++V+ I ++ A + G+ IH
Sbjct: 180 TWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYA 239
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
+K S + N LI MY++ + + VFD++ +++ISW +I+ YAQN A+
Sbjct: 240 MKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEAL 299
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
+ V K + GS L A L H + H + +K GL SD ++ + ++D
Sbjct: 300 KLLRKVQTKGMDVDTMMIGSTLLACSGLR--CLSHAKEVHGYTLKRGL-SDLMMQNMIID 356
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
+Y G+I + R+F + K +WT++IS +G + F M+ V PDSIT
Sbjct: 357 VYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSIT 416
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSML-KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
+S+L+ ++KG+ + + K + +E S + +VDM G LE A + V
Sbjct: 417 LVSILSAAASLSALNKGKEIHGFIFRKGFMLEGST--VNSLVDMYACCGSLENAYK-VFI 473
Query: 520 IPGGPGLSVLQSLLGACRIHG 540
L + +++ A +HG
Sbjct: 474 CTRSKSLVLWTTMINAYGMHG 494
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 210/644 (32%), Positives = 348/644 (54%), Gaps = 19/644 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDDALS----FALRMNLIGVVFDAVTYSTALSFCLDHE 71
IF ++ PD+ +N ++ GF ++ S FA + ++ TY+ A+S
Sbjct: 74 IFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFR 133
Query: 72 GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
G +H + G DSE+ +G+ ++ MY ++ R+ +AR+VFD MP KD++ WN ++S
Sbjct: 134 DDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMIS 193
Query: 132 GYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
GY ++ Y VE+I +++ + RLD + A + L LG QIH ++ K G
Sbjct: 194 GYRKNEMY-VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKE 245
+H V +S YSKC A+ +FR +++++ MI + E ++SLFKE
Sbjct: 253 YSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
+ L G T + L+ L+ IHG +K+NFLS SV L T+Y++
Sbjct: 313 LMLSGAKLKSSTLVSLVPVSGHLMLIYA---IHGYSLKSNFLSHTSVSTALTTVYSKLNE 369
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNA 364
++ + K+FDE + + SWNA+ISGY QNGL+ A+ F + E PN T +L+A
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSA 429
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+SL G+ H + +S V +AL+ MY K GSI E++R+F+ +K+E
Sbjct: 430 CAQLGALSL--GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEV 487
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W +IS HG + + F EM N G+ P +TFL VL C G++ +G +F+SM
Sbjct: 488 TWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+ Y EPS HY+C+VD+LGR G L+ A + + +P PG SV ++LLGACRIH + +
Sbjct: 548 IHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNL 607
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
+++ L +++P G +VL+SN+++ ++ A +R+ K + + K G++ ++G+
Sbjct: 608 ARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGE 667
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
H F+SGD +HP+ + I+ E L +M+ + E +AL
Sbjct: 668 TP--HVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELAL 709
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 217/454 (47%), Gaps = 26/454 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLIG---VVFD 56
+ MY K + + A +F+ + D + WNT++SG+ K++ + S + +LI D
Sbjct: 161 VKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLD 220
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T L + + G+Q+HSL K G S YV I++YS+ G++ A +F
Sbjct: 221 TTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFR 280
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNL 175
E D V++NA++ GYT +G+ E L+L E+M G +L + S GH L
Sbjct: 281 EFRRPDIVAYNAMIHGYTSNGE--TELSLSLFKELMLSGAKLKSSTLVSLVPVSGH---L 335
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
L IHG S+K + +H SV L + YSK A K+F ++++ SW MIS
Sbjct: 336 MLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 234 -MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
N EDA+SLF+EM+ PN VT ++ A + + G+ +H L T+F S
Sbjct: 396 TQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V LI MYA+ S+ ++ ++FD + + ++WN +ISGY +G A+ F ++
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNS 515
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSI 408
P TF VL A A + K G + +I + G + + ++D+ G+ G +
Sbjct: 516 GIAPTPVTFLCVLYACSHAGLV--KEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHL 573
Query: 409 FESQRVFNETQ----EKSEFAWTAIISALARHGD 438
QR + + W ++ A H D
Sbjct: 574 ---QRALQFIEAMPIQPGPSVWETLLGACRIHKD 604
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 208/649 (32%), Positives = 368/649 (56%), Gaps = 22/649 (3%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALS-FALRMNLIGVVFDA 57
++Y K A +F+ +P++ WN+ L + ++ ++ L F L + G D
Sbjct: 44 SLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDN 103
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
T AL C G +H K + S+++VG+AL+ +YS+ G++ EA +VF+
Sbjct: 104 FTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFE 163
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIE--MMRKGLRLDHVSFTSAASACGHEKN 174
E D+V W ++++GY Q+ D E LAL +M + LD V+ S SAC N
Sbjct: 164 EFQRPDTVLWTSMVTGYQQNND--PEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLN 221
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
++ G +HG+ I+ + + + N L++ Y+K A +F +M +++VISW+TMI+
Sbjct: 222 VKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIAC 281
Query: 234 -MNRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
N E +A++LF EM PN VT + + A ++ ++EG+ IH + + F +
Sbjct: 282 YANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELD 341
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV LI MY + ++ +F L ++++SW AL+SGYAQNG++ ++ F ++
Sbjct: 342 FSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLS 401
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ +P+A +V+ + A+ ++ + C H ++++ G +S+ VG++L+++Y K GS
Sbjct: 402 DGIQPDAV---AVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGS 458
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLT 466
+ ++ ++F + W+++I+A HG + F +M +N VRP+++TFLS+L+
Sbjct: 459 LGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILS 518
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G++ +G +FD M+ DY + P +H+ MVD+LGR+G+L +A +++ ++P G
Sbjct: 519 ACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGP 578
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +LLGACRIH N+EMGE A L ++P+ +G Y+L+SN+YA G W+ VA LR +
Sbjct: 579 HVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRI 638
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
K +G++K G S +V G+H F + D HP S++IY + L ++M
Sbjct: 639 KERGLKKMFGQSMVEVR--GGVHSFLASDRFHPDSQKIYELLRKLEAQM 685
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/433 (33%), Positives = 247/433 (57%), Gaps = 12/433 (2%)
Query: 213 ANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISI 267
A+ VF + + W MI D ++ L+ +M G+ P+ F + + +
Sbjct: 771 ASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAG 830
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
+ ++ G++IH + ++ V L+ MYA+ ++ + VFD+++ R+++SW ++
Sbjct: 831 LSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSM 890
Query: 328 ISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
ISGYA NG + + FF +++ S PN + SVL A G +L+ G+ HS++I+
Sbjct: 891 ISGYAHNGYN-SETLGFFDLMRSSGVIPNRVSILSVLLACGNLG--ALRKGEWFHSYVIQ 947
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
G + D +V +A++DMY K GS+ ++ +F+ET K W+A+I++ HG ++
Sbjct: 948 TGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDL 1007
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLG 505
F +M GVRP +TF VL+ C +G++ +G+ F M +++ I +Y+CMVD+LG
Sbjct: 1008 FDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLG 1067
Query: 506 RVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVL 565
R G+L EA +L+ +P P S+ SLLGACRIH N+++ E+IAD L ++P +G +VL
Sbjct: 1068 RAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVL 1127
Query: 566 MSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+SN+YA K W V +RK M +G K GFS + + +H F GD +HP+ E++Y
Sbjct: 1128 LSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYD--NQVHKFGVGDRSHPQWEKLY 1185
Query: 626 RMAECLGSEMKYL 638
E L + MK+L
Sbjct: 1186 AKLEELAAPMKHL 1198
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/505 (27%), Positives = 251/505 (49%), Gaps = 18/505 (3%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLHS + K G+ + + L ++Y++ L AR+VFDE P+ + WN+ L Y ++
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 138 DYGVEAILALIEMM--RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG-YGTHV 194
+ E L L +M G D+ + A AC + LELGK IHG + K G+ +
Sbjct: 82 QW--EETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDM 139
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEM-RL 248
VG+ L+ YSKC G+A KVF + + WT+M++ + E+A++LF +M +
Sbjct: 140 FVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
D V + VT + ++ A + VK G +HGL I+ F + + N L+ +YA+ +
Sbjct: 200 DCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKI 259
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGA 367
+ +F ++ +++ISW+ +I+ YA N + A+ F +I K +PN+ T S L A
Sbjct: 260 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 319
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
+ + L+ G++ H + G + D V +AL+DMY K E+ +F +K +W
Sbjct: 320 SRN--LEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWV 377
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
A++S A++G M F+ M + G++PD++ + +L G+ + L +++
Sbjct: 378 ALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS 437
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELV-GQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
+ + ++++ + G L +A +L G I + + S++ A IHG
Sbjct: 438 -GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIV--RDVVIWSSMIAAYGIHGRGGEAL 494
Query: 547 RIADALMKMEPAGSGSYVLMSNLYA 571
I D ++K + +S L A
Sbjct: 495 EIFDQMVKNSTVRPNNVTFLSILSA 519
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 238/454 (52%), Gaps = 18/454 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIG-VVFD 56
+ +Y K GQ +AL +F PD V W ++++G+++++D AL+ +M ++ VV D
Sbjct: 146 VELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLD 205
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT + +S C G +H L+++ D ++ + N+L+ +Y++ G A +F
Sbjct: 206 PVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFS 265
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+MP KD +SW+ +++ Y + + EA+ EM+ K + V+ SA AC +NLE
Sbjct: 266 KMPEKDVISWSTMIACYANN-EAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLE 324
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
GK+IH +++ G+ SV L+ Y KC +A +F+R+ ++V+SW ++S
Sbjct: 325 EGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYA 384
Query: 237 EDAVS-----LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ ++ +F+ M DG+ P+ V + ++ A S + ++ +HG +++ F S
Sbjct: 385 QNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVF 444
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V LI +Y++ S+ D+ K+F + R+++ W+++I+ Y +G A++ F ++K S
Sbjct: 445 VGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNS 504
Query: 352 --KPNAYTFGSVLNAVGAAEDIS--LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+PN TF S+L+A A + LK R H ++ DS+ ++D+ G+ G
Sbjct: 505 TVRPNNVTFLSILSACSHAGLVEEGLKIFDR-MVHDYQLRPDSEHF--GIMVDLLGRIGQ 561
Query: 408 IFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ ++ + N W A++ A H + E
Sbjct: 562 LGKAMDIINRMPIPAGPHVWGALLGACRIHHNIE 595
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 184/376 (48%), Gaps = 21/376 (5%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
+ H+ I +GL + + MY + R+ A VF+++PN S WN ++ G+ DG
Sbjct: 738 KTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDG 797
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ + ++ +MM KGL+ D +F A +C +L+ GK IH + G + V
Sbjct: 798 RF-LSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS------MNREDAVSLFKEMRLDGV 251
L+ Y+KC A VF +M R+++SWT+MIS N E + F MR GV
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSE-TLGFFDLMRSSGV 915
Query: 252 CPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
PN V+ + ++ ++ GNL +++G H I+T F + V ++ MY++ S+ +
Sbjct: 916 IPNRVSILSVL--LACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLA 973
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV--- 365
+FDE + ++++ W+A+I+ Y +G A+ F ++K +P+ TF VL+A
Sbjct: 974 RCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHS 1033
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF-NETQEKSEF 424
G E+ + +I L + + ++D+ G+ G + E+ + N E
Sbjct: 1034 GLLEEGKMYFQLMTEEFVIARKLSN----YACMVDLLGRAGQLSEAVDLIENMPVEPDAS 1089
Query: 425 AWTAIISALARHGDYE 440
W +++ A H + +
Sbjct: 1090 IWGSLLGACRIHNNLD 1105
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 164/350 (46%), Gaps = 16/350 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS---FALRMNLIGVVFDAVT 59
MY + D A +F ++ NP WN ++ GF LS +M G+ D
Sbjct: 761 MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFA 820
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ AL C G +H +V G ++++V AL+ MY++ G + AR VFD+M
Sbjct: 821 FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA 880
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELG 178
+D VSW +++SGY +G Y E L ++MR G+ + VS S ACG+ L G
Sbjct: 881 VRDLVSWTSMISGYAHNG-YNSET-LGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKG 938
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+ H I+ G+ + V +M YSKC A +F ++++ W+ MI+
Sbjct: 939 EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIH 998
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ A+ LF +M GV P+ VTF ++ A S L++EG+M L + F+ +
Sbjct: 999 GHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQL-MTEEFVIARKLS 1057
Query: 294 N--CLITMYARFESMQDSEKVFDELSCREIIS-WNALISG-YAQNGLSLA 339
N C++ + R + ++ + + + S W +L+ N L LA
Sbjct: 1058 NYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLA 1107
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 100/182 (54%), Gaps = 4/182 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G + A +F+ + D+VSW +++SG+ + + L F M GV+ +
Sbjct: 860 VDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNR 919
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V+ + L C + G HS +++ G + ++ V A++ MYS+ G L AR +FDE
Sbjct: 920 VSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDE 979
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
KD V W+A+++ Y G +G +AI +M++ G+R HV+FT SAC H LE
Sbjct: 980 TAGKDLVCWSAMIASYGIHG-HGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEE 1038
Query: 178 GK 179
GK
Sbjct: 1039 GK 1040
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 71/180 (39%), Gaps = 14/180 (7%)
Query: 340 AVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
AV F+ IK ++ T GS A G ++ H+ I GL D + +
Sbjct: 703 AVLQFWQRIKATESKYKTIGS---APGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFA 759
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
MY I + VF + F W +I A G + S + + +M KG++PD
Sbjct: 760 IMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKF 819
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSML-----KDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
F L C + +G+ + ++ D ++ + +VDM + G +E A
Sbjct: 820 AFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAA------LVDMYAKCGDIEAAR 873
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 15/140 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
M+MY K G D A C+F+ D+V W+ +++ + A+ +M GV
Sbjct: 961 MDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSH 1020
Query: 58 VTYSTALSFCLDHEGFL------FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
VT++ LS C H G L F L ++ L + ++ + R G+L EA
Sbjct: 1021 VTFTCVLSAC-SHSGLLEEGKMYFQLMTEEFVIARKLSNYA----CMVDLLGRAGQLSEA 1075
Query: 112 RRVFDEMP-NKDSVSWNAIL 130
+ + MP D+ W ++L
Sbjct: 1076 VDLIENMPVEPDASIWGSLL 1095
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 213/631 (33%), Positives = 353/631 (55%), Gaps = 21/631 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + D VSWN +L+ S +A M+ G+ + +AL
Sbjct: 49 VFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARR 108
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G QL SL +K GL + V+ +AL+ +Y++ GR+ +AR+VFD MP +++VSWNA+++G
Sbjct: 109 PAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAG 168
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
YT+ GD A+ +EM R+GL D +F S +A + L Q+HG +K G
Sbjct: 169 YTESGDMA-SALELFLEMEREGLVPDEATFASLLTAV-EGPSCFLMHQLHGKIVKYGSAL 226
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS------MNREDAVSLFKE 245
++V N ++ YS+C D+ ++F + D R++ISW M+ M+ E +
Sbjct: 227 GLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRM 286
Query: 246 MRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
M+ GV P+ +F +I + S G+ +GR+IHGL IK+ VCN LI MY R+
Sbjct: 287 MQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYN 346
Query: 305 S---MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
M+D+ K F+ L ++ +SWN++++GY+Q+GLS A++ F + E+ + + Y F +
Sbjct: 347 ENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSA 406
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
L + ++E L+ G++ H +I G S+ V S+L+ MY K G I ++++ F E +
Sbjct: 407 ALRS--SSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADK 464
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
S W A+I A+HG E+V F EM + D ITF+ ++T C G++ +G +
Sbjct: 465 SSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI 524
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
++M Y + +HY+C VD+ GR G+L++A++L+ +P P V +LLGACRIHG
Sbjct: 525 LNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHG 584
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
NVE+ +A L EP +YVL+S++Y+ G W A +++ MK +G+ K G+S
Sbjct: 585 NVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSLI 644
Query: 601 DVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
+V + +H F++ D +HP+ +EIY M L
Sbjct: 645 EVK--NEVHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 212/415 (51%), Gaps = 19/415 (4%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGR--LVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
H+ ++K G + N L+T YSR L ARRVFDE+P +D VSWNA+L+ + G
Sbjct: 14 HASLLKSGFAAPT-PWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASG 72
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ EA L M +GL + + SA + + +G Q+ +++K G +V
Sbjct: 73 AHP-EAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAA 131
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVC 252
+ L+ Y+KC DA +VF M +RN +SW +I+ E A+ LF EM +G+
Sbjct: 132 SALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLV 191
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P++ TF L+ A+ G +HG +K +V N IT Y++ S++DS ++
Sbjct: 192 PDEATFASLLTAVE-GPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRI 250
Query: 313 FDEL-SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAE 369
FD + R++ISWNA++ Y NG+ A++ F +++ES P+ Y+F S++++ +E
Sbjct: 251 FDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSC--SE 308
Query: 370 DISLKH-GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS---IFESQRVFNETQEKSEFA 425
H G+ H +IK L+ V +AL+ MY + + ++ + FN K +
Sbjct: 309 HGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVS 368
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
W ++++ ++HG + F+ M ++ VR D F + L ++ G+ +
Sbjct: 369 WNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQI 423
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 233/456 (51%), Gaps = 19/456 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+++Y K G+ A +F+ + + VSWN +++G+ +S D AL L M G+V D
Sbjct: 135 LDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDE 194
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ L+ FL QLH IVK+G + V NA IT YS+ G L ++RR+FD
Sbjct: 195 ATFASLLTAVEGPSCFLMH-QLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDG 253
Query: 118 MPN-KDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACG-HEKN 174
+ + +D +SWNA+L YT +G EA+ + MM++ G+ D SFTS S+C H +
Sbjct: 254 IGDIRDLISWNAMLGAYTHNG-MDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHD 312
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE---VTGDANKVFRRMHDRNVISWTTM 231
G+ IHG+ IK V N L++ Y++ + DA K F + ++ +SW +M
Sbjct: 313 DHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSM 372
Query: 232 ISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
++ + DA+ F+ M + V ++ F + + S +++ G+ IHGL I + F
Sbjct: 373 LTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGF 432
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S V + LI MY++ + D+ K F+E + WNA+I GYAQ+G + F
Sbjct: 433 ASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNE 492
Query: 347 VIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++ P + TF ++ + A + + + ++ K G+ + +D+YG+
Sbjct: 493 MLQRKAPLDHITFVGLITSCSHAGLVD-EGSEILNTMETKYGVPLRMEHYACGVDLYGRA 551
Query: 406 GSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G + +++++ + E W ++ A HG+ E
Sbjct: 552 GQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVE 587
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 215/653 (32%), Positives = 373/653 (57%), Gaps = 27/653 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTY 60
Y K G+ A +F + D VSWNT+++GF + AL F M G D ++
Sbjct: 44 YAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSF 103
Query: 61 STALS--FCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ L C+ G++ G Q+HS++VK G + V+ G+AL+ MY++ R+ +A VF
Sbjct: 104 GSILKGVACV---GYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKS 160
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++SV+WNA++SGY Q GD G A L M +G+ +D +F + +L
Sbjct: 161 INIRNSVTWNALISGYAQVGDRGT-AFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKL 219
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR-RMHDRNVISWTTMISM-- 234
Q+H +K G + +V N +++ YS+C DA +VF + R++++W +M++
Sbjct: 220 TTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYL 279
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E+A LF EM++ G P+ T+ +I A G+ +G+ +HGL IK
Sbjct: 280 VNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVP 339
Query: 292 VCNCLITMYARF--ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ N LI MY + +SM ++ +F+ L ++ +SWN++++G++Q+GLS A++ FF ++
Sbjct: 340 ISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALK-FFENMR 398
Query: 350 ESKP--NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ Y F +VL + ++ +L+ GQ+ H ++K G + + V S+L+ MY K G
Sbjct: 399 SQYVVIDHYAFSAVLRS--CSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGV 456
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I ++++ F+ T + S AW ++I A+HG + ++ F M+++ V+ D ITF++VLT
Sbjct: 457 IEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTA 516
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ +G SM DY I P +HY+CM+D+LGR GRL+EA+ L+ +P P
Sbjct: 517 CSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAM 576
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V ++LLGACR G++E+ ++A L+++EP +YVL+S+++ W A +++ MK
Sbjct: 577 VWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMK 636
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY-RMAECLGSEMKYLN 639
+GV+K G+SW +V + + F++ D +HP EEIY R+ E L E++ L+
Sbjct: 637 ERGVKKVPGWSWIEVK--NEVRSFNAEDRSHPNCEEIYLRLGE-LMEEIRRLD 686
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 235/451 (52%), Gaps = 13/451 (2%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H L +K G + +Y N +I+ Y++ G + A ++F E +D+VSWN +++G+ G++
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 140 GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
A+ L M R G +D SF S +E+G+Q+H + +KMGY +V G+
Sbjct: 82 ET-ALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSA 140
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPN 254
L+ Y+KCE DA +VF+ ++ RN ++W +IS +R A L M L+GV +
Sbjct: 141 LLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEID 200
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
D TF L+ + +L K +H +K S+ +VCN +IT Y+ S++D+E+VFD
Sbjct: 201 DGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFD 260
Query: 315 -ELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDIS 372
+ R++++WN++++ Y N A Q F + + +P+ YT+ SV++A A E
Sbjct: 261 GAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISA--AFEGSH 318
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK--RGSIFESQRVFNETQEKSEFAWTAII 430
G+ H +IK GL+ + ++L+ MY K S+ E+ +F + K +W +I+
Sbjct: 319 QGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSIL 378
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
+ ++ G E + F+ M ++ V D F +VL C + G+ + +LK
Sbjct: 379 TGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKS-GF 437
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
EP+ S ++ M + G +E+A + P
Sbjct: 438 EPNGFVASSLIFMYSKCGVIEDARKSFDATP 468
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 223/456 (48%), Gaps = 21/456 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK-SDDALSFALR--MNLIGVVFDA 57
++MY K + + A +F ++N + V+WN ++SG+ + D +F L M L GV D
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD- 116
T++ L+ D + Q+H+ IVK GL S+ V NA+IT YS G + +A RVFD
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +D V+WN++L+ Y + EA +EM G D ++TS SA +
Sbjct: 262 AIETRDLVTWNSMLAAYLVNNQEE-EAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQG 320
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTY--SKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
GK +HG+ IK G V + N L++ Y S + +A +F + +++ +SW +++
Sbjct: 321 QGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTG 380
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
S EDA+ F+ MR V + F ++ + S ++ G+ +H L +K+ F
Sbjct: 381 FSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPN 440
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI- 348
V + LI MY++ ++D+ K FD I+WN+LI GYAQ+G A+ FF +
Sbjct: 441 GFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKD 500
Query: 349 KESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ K + TF +VL A +G E+ S G+ + ++D+ G+
Sbjct: 501 RRVKLDHITFVAVLTACSHIGLVEE----GWSFLKSMESDYGIPPRMEHYACMIDLLGRA 556
Query: 406 GSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G + E++ + E W ++ A GD E
Sbjct: 557 GRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIE 592
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 7/186 (3%)
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L+++ + +L H IK G + + ++ Y K G I + ++F ET ++
Sbjct: 4 LHSLSQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQR 63
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+W +I+ G++E+ + K M+ G D +F S+L G + G+ +
Sbjct: 64 DAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVH 123
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
M+K + E + S ++DM + R+E+A E+ I ++ S+ I G
Sbjct: 124 SMMVKMGY-EGNVFAGSALLDMYAKCERVEDAFEVFKSI------NIRNSVTWNALISGY 176
Query: 542 VEMGER 547
++G+R
Sbjct: 177 AQVGDR 182
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 212/643 (32%), Positives = 351/643 (54%), Gaps = 15/643 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAV 58
MY G D A +F+ + + VSWN ++S + K+D DA+ M G+
Sbjct: 51 MYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEF 110
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+S ++ C G Q+H+++V+ G + +V+ NAL+ MY + GR+ A +F++M
Sbjct: 111 GFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKM 170
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P+ D VSWNA++SG +G + AI L++M GL + +S AC +LG
Sbjct: 171 PDSDVVSWNALISGCVLNG-HDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 229
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+QIHG IK + +G L+ Y+K DA KVF M R++I W +IS
Sbjct: 230 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHG 289
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
++A S+F +R +G+ N T ++ + + R +H L K F+ + V
Sbjct: 290 GRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVV 349
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N LI Y + + D+ +VF+E S +II+ ++I+ +Q A++ F ++++ +
Sbjct: 350 NGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLE 409
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ + S+LNA + + + G++ H+H+IK SD G+AL+ Y K GSI +++
Sbjct: 410 PDPFVLSSLLNACASLS--AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 467
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
F+ E+ +W+A+I LA+HG + + F M ++G+ P+ IT SVL C G
Sbjct: 468 LAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 527
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ + + F+SM + + I+ + +HYSCM+D+LGR G+L++A ELV +P SV +L
Sbjct: 528 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGAL 587
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
LGA R+H + E+G+ A+ L +EP SG++VL++N YA G W VA +RK MK ++
Sbjct: 588 LGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIK 647
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
KE SW +V D +H F GD +HP ++EIY + LG M
Sbjct: 648 KEPAMSWVEVK--DKVHTFIVGDKSHPMTKEIYSKLDELGDLM 688
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 151/494 (30%), Positives = 250/494 (50%), Gaps = 19/494 (3%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM-PNKDSVSWNAILSGY 133
G Q+H++ + G S+V+V NAL+ MY +G + +ARRVFDE +++VSWN ++S Y
Sbjct: 25 LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAY 84
Query: 134 TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
++ G +AI EM+ G++ F+ +AC +N++ G+Q+H + ++MGY
Sbjct: 85 VKNDQCG-DAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 143
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEMRL 248
V N L+ Y K A+ +F +M D +V+SW +IS +N D A+ L +M+
Sbjct: 144 VFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKS 203
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
G+ PN ++ A + GR IHG IK N S+ + L+ MYA+ + D
Sbjct: 204 SGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDD 263
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGA 367
+ KVFD +S R++I WNALISG + G A F+G+ KE N T +VL + +
Sbjct: 264 AMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTAS 323
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
E S ++ H+ K+G D V + L+D Y K + ++ RVF E A T
Sbjct: 324 LEAASAT--RQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVT 381
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
++I+AL++ E + F EM KG+ PD S+L C +G+ + ++K
Sbjct: 382 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 441
Query: 488 YHIEPSPDHYS--CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+ D ++ +V + G +E+AE +P G+ +++G HG+ G
Sbjct: 442 QFMS---DAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGH---G 494
Query: 546 ERIADALMKMEPAG 559
+R + +M G
Sbjct: 495 KRALELFGRMVDEG 508
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 229/451 (50%), Gaps = 14/451 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G+ D A IF + + D+VSWN ++SG A+ L+M G+V +
Sbjct: 151 VDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNV 210
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ L C F G Q+H ++K DS+ Y+G L+ MY++ L +A +VFD
Sbjct: 211 FMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDW 270
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++D + WNA++SG + G + EA + ++GL ++ + + + +
Sbjct: 271 MSHRDLILWNALISGCSHGGRHD-EAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASA 329
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
+Q+H ++ K+G+ V N L+ +Y KC DA +VF ++I+ T+MI+
Sbjct: 330 TRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQ 389
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E A+ LF EM G+ P+ L++A + + ++G+ +H IK F+S+
Sbjct: 390 CDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA 449
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ YA+ S++D+E F L R ++SW+A+I G AQ+G A++ F ++ E
Sbjct: 450 GNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGI 509
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFE 410
PN T SVL A A + +R + + ++ G+D S ++D+ G+ G + +
Sbjct: 510 NPNHITMTSVLCACNHAGLVD--EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 567
Query: 411 SQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ + N + + W A++ A H D E
Sbjct: 568 AMELVNSMPFQANASVWGALLGASRVHKDPE 598
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 150/300 (50%), Gaps = 11/300 (3%)
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMI 232
+ +LG Q+H +++ G+G+ V V N L++ Y DA +VF +RN +SW ++
Sbjct: 22 DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 81
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S + DA+ +F EM G+ P + F +++A + + GR +H + ++ +
Sbjct: 82 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 141
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ N L+ MY + + + +F+++ +++SWNALISG NG A++
Sbjct: 142 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ- 200
Query: 348 IKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+K S PN + S+L A A L G++ H +IK DSD +G L+DMY K
Sbjct: 201 MKSSGLVPNVFMLSSILKACAGAGAFDL--GRQIHGFMIKANADSDDYIGVGLVDMYAKN 258
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
+ ++ +VF+ + W A+IS + G ++ + F + +G+ + T +VL
Sbjct: 259 HFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVL 318
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 212/657 (32%), Positives = 355/657 (54%), Gaps = 21/657 (3%)
Query: 7 SGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSF--ALRMNLIGVVFDAVTYS 61
SG+ A +F+ + DI SW ++ G+ K ++AL A+R++ +GV D S
Sbjct: 41 SGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLS 100
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
AL C +G LH+ K L S V+VG+AL+ MY R G++ ++ RVF EMP +
Sbjct: 101 VALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFR 160
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQ 180
+SV+W A ++G G + E + +M R K L D +F A AC + ++ G++
Sbjct: 161 NSVTWTAFITGLVHAGLH-YEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGRE 219
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----N 235
IH I G+ + V N L + Y++C D ++F M +R+V+ WT++I+
Sbjct: 220 IHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQ 279
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
E AV+ F MR V PN+ TF A + + + G +HG SV N
Sbjct: 280 EEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNS 339
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KP 353
++ MY+ + + +F + CR+IISW+ +I GY+Q + +F ++++ +P
Sbjct: 340 MMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFK-YFSWMRQAGPQP 398
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ S+L+ G L+ G++ H+ + +GL+ +P + SAL++MY K GSI E+ +
Sbjct: 399 TDFALASLLSVSGIMA--VLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASK 456
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF E + TA+I+ A HG E ++ F++ RPD +TF+SVLT C +G
Sbjct: 457 VFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQ 516
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ G F+ M ++Y++ P+ +HY CMVD+L R GRL +AE+++ ++P V +LL
Sbjct: 517 LDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLL 576
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
AC+ G+VE G R A +++++P + V ++N+++ G+W+ A +RK MKSKGV K
Sbjct: 577 RACKEKGDVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNWKEAANVRKDMKSKGVIK 636
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE--CLGSEMKYLNSKRERAIAL 648
E G W+ + D + F+SG +HP+SE++ + E + SE + +RA L
Sbjct: 637 EPG--WSSILIKDQVSAFASGSLSHPQSEDVCSILELVVIDSEAHRYDCAIKRAFGL 691
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 239/480 (49%), Gaps = 21/480 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIG-VVFD 56
++MY + G+ DK+ +F + + V+W ++G + + L + +M+ + D
Sbjct: 138 LDMYMRIGKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSD 197
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ AL C D +G ++H+ ++ G + ++V N+L TMY+ G + + R+F+
Sbjct: 198 TFAFAIALKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFE 257
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +D V W ++++ Y + G +A+ + M + + +F S +AC L
Sbjct: 258 SMSERDVVLWTSLITAYIRIGQEE-KAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLV 316
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
G+Q+HG +G G +SV N +M YS C A+ +F+ M R++ISW+T+I
Sbjct: 317 WGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYS 376
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E+ F MR G P D L+ I ++++GR +H L + P+
Sbjct: 377 QAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPT 436
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ + LI MY++ S+ ++ KVF+E +I+S A+I+GYA++G A+ F +K S
Sbjct: 437 IRSALINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLS 496
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSI 408
+P+ TF SVL A + + L + ++++ + P ++D+ + G +
Sbjct: 497 FRPDDVTFISVLTACSHSGQLDLGFQ---YFNLMQENYNMRPAKEHYGCMVDLLCRAGRL 553
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+++++ NE +K + WT ++ A GD E + + + + D +F +++T+
Sbjct: 554 NDAEKMINEMPWKKDDVVWTTLLRACKEKGDVE----RGRRAAQRILELDPTSFTTLVTL 609
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 216/638 (33%), Positives = 358/638 (56%), Gaps = 25/638 (3%)
Query: 3 MYCKSGQFDKALCIFNN--LNNPDIVSWNTVLS---GFEKSDDALSFALRMNLIGVVFDA 57
MY K G A +F++ + D VSWN+++S G +S +ALS RM +GV +
Sbjct: 192 MYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNT 251
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ +AL C G +H++I+K ++VYV NALI MY+ G++ +A RVF
Sbjct: 252 YTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKS 311
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD VSWN +LSG Q+ Y +AI +M G + D VS + +A G NL
Sbjct: 312 MLFKDCVSWNTLLSGMVQNDMYS-DAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLA 370
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G ++H +IK G +++ +GN L+ Y KC F M ++++ISWTT+I+ +
Sbjct: 371 GMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQ 430
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIG----NLVKEGRMIHGLCIKTNFLS 288
DA++L ++++L+ + D IG I G L+KE IHG +K L+
Sbjct: 431 NECHLDALNLLRKVQLEKM-DVDPMMIGSILLACSGLKSEKLIKE---IHGYVLKGG-LA 485
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ + N ++ +Y + + VF+ ++ ++I+SW ++I+ NGL++ A++ F +I
Sbjct: 486 DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLI 545
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ + +P+ T SVL A A SLK G+ H +I+ G + ++ ++L+DMY + G+
Sbjct: 546 ETNIEPDLITLVSVLYAAAALS--SLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGT 603
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ +FN +++ WT++I+A HG + ++ F +M ++ V PD ITFL++L
Sbjct: 604 MENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYA 663
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C +G++ +G+ F+ M +Y +EP P+HY+C+VD+L R LEEA V +P P
Sbjct: 664 CSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAE 723
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V +LLGACRIH N ++GE A L+++ SG+YVL+SN +A G W V +R MK
Sbjct: 724 VWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMK 783
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
++K+ G SW +V + +H F + D +HP+ IY
Sbjct: 784 GNKLKKKPGCSWIEVE--NKIHTFMARDKSHPQCNNIY 819
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 220/420 (52%), Gaps = 16/420 (3%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNALITMYSRWGRLVEARRVFDE 117
YS AL C H+ G QLH+ +K LDS V++ + MY + G +A +VFD+
Sbjct: 49 YSQALELCASHKALPQGQQLHAHFLKTQNYLDS-VFLDTKFVHMYGKCGSFYDAVKVFDK 107
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + +WNA++ G Y VEAI EM G+ LD +F ACG K L
Sbjct: 108 MSERTIFTWNAMIGACVSAGRY-VEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRL 166
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR--MHDRNVISWTTMISMN 235
G +IHGV++K GYG V V N L++ Y+KC G A +F M + +SW ++IS +
Sbjct: 167 GCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAH 226
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+A+SLF+ M+ GV N TF+ + A +K GR IH + +K+N ++
Sbjct: 227 VGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDV 286
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N LI MYA M+D+E+VF + ++ +SWN L+SG QN + A+ F +
Sbjct: 287 YVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDS 346
Query: 351 -SKPNAYTFGSVLNAVGAA-EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
KP+ SVLN + A+ +L G H++ IK G+DS+ +G++L+DMYGK +
Sbjct: 347 GQKPDQV---SVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCV 403
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
F EK +WT II+ A++ + +N ++++ + + D + S+L C
Sbjct: 404 KYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLAC 463
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 158/567 (27%), Positives = 280/567 (49%), Gaps = 22/567 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G F A+ +F+ ++ I +WN ++ + +A+ M ++GV DA
Sbjct: 89 VHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDA 148
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L C + G ++H + VK G V+V NALI MY++ G L AR +FD
Sbjct: 149 FTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDS 208
Query: 118 --MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M D VSWN+I+S + +G+ +EA+ M G+ + +F SA AC +
Sbjct: 209 GLMEKDDPVSWNSIISAHVGEGE-SLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFI 267
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
++G+ IH V +K + T V V N L++ Y+ C DA +VF+ M ++ +SW T++S
Sbjct: 268 KIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGM 327
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ DA++ F++M+ G P+ V+ + +I A + G +H IK S
Sbjct: 328 VQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNM 387
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
+ N LI MY + ++ F+ + +++ISW +I+GYAQN L A+ V ++
Sbjct: 388 HIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLE 447
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ + GS+L A + S K + H +++K GL +D ++ +A++++YG+ +
Sbjct: 448 KMDVDPMMIGSILLACSGLK--SEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVD 504
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ VF K +WT++I+ +G + F + + PD IT +SVL
Sbjct: 505 YARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAA 564
Query: 470 RNGMIHKGRHLFDSML-KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+ KG+ + ++ K + +E + +VDM R G +E A + + L +
Sbjct: 565 ALSSLKKGKEIHGFLIRKGFFLEGLIA--NSLVDMYARCGTMENARNIFNYVKQR-DLIL 621
Query: 529 LQSLLGACRIHGNVEMGERIADALMKM 555
S++ A +HG G+ D KM
Sbjct: 622 WTSMINANGMHG---CGKDAIDLFSKM 645
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 372 SLKHGQRCHSHIIKVG--LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+L GQ+ H+H +K LDS + + + MYGK GS +++ +VF++ E++ F W A+
Sbjct: 61 ALPQGQQLHAHFLKTQNYLDS-VFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAM 119
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
I A G Y + +KEM GV D+ TF VL CG
Sbjct: 120 IGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACG 159
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 207/568 (36%), Positives = 321/568 (56%), Gaps = 15/568 (2%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
L C + FL GL LH+ +K G+ S++ V N +I +YS+ G ++ ARR+FDEM +++
Sbjct: 10 LHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNL 69
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
VSW+AI+SGY Q G + +LAL + + + F S SAC L G Q+H
Sbjct: 70 VSWSAIISGYDQTG----QPLLALNLFSQMRIVPNEYVFASVISACASLTALSQGLQVHA 125
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNRED 238
S+K+G + V N L+S Y KC + DA V M + N +S+ +I+ E
Sbjct: 126 QSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEK 185
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
+ FK MR G P+ TF GL+ + + G +H IK N + N +IT
Sbjct: 186 GIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIIT 245
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAY 356
MY++F ++++EKVF + +++ISWN L++ A++ F ++ KP+ +
Sbjct: 246 MYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDF 305
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
TF VL A S++HG++ H H+I+ D V +AL++MY K GSI S VF
Sbjct: 306 TFAGVLAACAGLA--SIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFR 363
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
T +++ +W II+A HG + F++M+ G+ PDS+TF+ +LT C G++ +
Sbjct: 364 RTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEE 423
Query: 477 GRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGAC 536
G+ F+SM + Y I P+ +H+SC++D+LGR GRL+EAEE + ++P G +L SLL AC
Sbjct: 424 GQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSAC 483
Query: 537 RIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVG 596
R+HG++ +GE +A L+K++P + YVL+SNLYA W VA K +K G++KE G
Sbjct: 484 RLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKEPG 543
Query: 597 FSWADVGDIDGLHGFSSGDNTHPRSEEI 624
S DV + F+ GD +H R EEI
Sbjct: 544 HSLIDV--MGMFEKFTMGDLSHSRIEEI 569
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 243/512 (47%), Gaps = 65/512 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIG---VVFDA 57
+N+Y K G A +F+ +++ ++VSW+ ++SG++++ L L +NL +V +
Sbjct: 45 INLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQPL---LALNLFSQMRIVPNE 101
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+++ +S C GLQ+H+ +K G S +V NALI+MY + G +A V +
Sbjct: 102 YVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNV 161
Query: 118 MPNKDSVSWNAILSGYT--QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M ++VS+NA+++G+ Q + G+EA M +KG D +F+ C +
Sbjct: 162 MSEPNAVSYNALIAGFVENQQPEKGIEAFKV---MRQKGFAPDRFTFSGLLGICTSYDDF 218
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
G Q+H IK+ +GNV+++ YSK + +A KVF + ++++ISW T+++
Sbjct: 219 WRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTAC 278
Query: 235 ----NREDAVSLFKEMRLDGVC---PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ E A+ +F++M LD VC P+D TF G++ A + ++ G+ IHG I+T
Sbjct: 279 CFCKDHERALRVFRDM-LD-VCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQY 336
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ V N L+ MYA+ S+++S VF S R ++SWN +I+ + +GL A++ F
Sbjct: 337 QDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHF--- 393
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ VG+ D + LL G
Sbjct: 394 ---------------------------------EKMKTVGIHPDSVTFVGLLTACNHAGL 420
Query: 408 IFESQRVFNETQEKSEF-----AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
+ E Q FN +E ++ +I L R G + + ME D I
Sbjct: 421 VEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAE---EYMEKLPFGHDPIILG 477
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
S+L+ C +G + G HL +LK + SP
Sbjct: 478 SLLSACRLHGDMVIGEHLATQLLKLQPVTTSP 509
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 172/368 (46%), Gaps = 15/368 (4%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
L+H + G +H +KT LS+ V N +I +Y++ ++ + ++FDE+S R
Sbjct: 9 LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRN 68
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
++SW+A+ISGY Q G L A+ F + PN Y F SV++A A +L G + H
Sbjct: 69 LVSWSAIISGYDQTGQPLLALNLFSQM--RIVPNEYVFASVISA--CASLTALSQGLQVH 124
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
+ +K+G S V +AL+ MY K G ++ V N E + ++ A+I+ + E
Sbjct: 125 AQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPE 184
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCM 500
+ FK M KG PD TF +L +C +G L M+K ++E S + +
Sbjct: 185 KGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIK-LNLEDSAFIGNVI 243
Query: 501 VDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGS 560
+ M + +EEAE++ G I +S +L+ AC + E R+ ++ +
Sbjct: 244 ITMYSKFNLIEEAEKVFGLIKEKDLIS-WNTLVTACCFCKDHERALRVFRDMLDVCFVKP 302
Query: 561 GSYVLMSNLYAEKGDWEMVAILRKGMKSKG--VRKEVGFSWADVGDIDGLHGFSSGDNTH 618
+ L A G +A +R G + G +R + DVG + L + +
Sbjct: 303 DDFTFAGVLAACAG----LASIRHGKQIHGHLIRTR---QYQDVGVSNALVNMYAKCGSI 355
Query: 619 PRSEEIYR 626
S +++R
Sbjct: 356 KNSYDVFR 363
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 212/643 (32%), Positives = 351/643 (54%), Gaps = 15/643 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAV 58
MY G D A +F+ + + VSWN ++S + K+D DA+ M G+
Sbjct: 144 MYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEF 203
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+S ++ C G Q+H+++V+ G + +V+ NAL+ MY + GR+ A +F++M
Sbjct: 204 GFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKM 263
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P+ D VSWNA++SG +G + AI L++M GL + +S AC +LG
Sbjct: 264 PDSDVVSWNALISGCVLNG-HDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 322
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+QIHG IK + +G L+ Y+K DA KVF M R++I W +IS
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHG 382
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
++A S+F +R +G+ N T ++ + + R +H L K F+ + V
Sbjct: 383 GRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVV 442
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N LI Y + + D+ +VF+E S +II+ ++I+ +Q A++ F ++++ +
Sbjct: 443 NGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLE 502
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ + S+LNA + + + G++ H+H+IK SD G+AL+ Y K GSI +++
Sbjct: 503 PDPFVLSSLLNACASLS--AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 560
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
F+ E+ +W+A+I LA+HG + + F M ++G+ P+ IT SVL C G
Sbjct: 561 LAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ + + F+SM + + I+ + +HYSCM+D+LGR G+L++A ELV +P SV +L
Sbjct: 621 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGAL 680
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
LGA R+H + E+G+ A+ L +EP SG++VL++N YA G W VA +RK MK ++
Sbjct: 681 LGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIK 740
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
KE SW +V D +H F GD +HP ++EIY + LG M
Sbjct: 741 KEPAMSWVEVK--DKVHTFIVGDKSHPMTKEIYSKLDELGDLM 781
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 275/556 (49%), Gaps = 25/556 (4%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + +P VSW+++++ + + A+ M GV + L D +
Sbjct: 59 VFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQ- 117
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM-PNKDSVSWNAILS 131
G Q+H++ + G S+V+V NAL+ MY +G + +ARRVFDE +++VSWN ++S
Sbjct: 118 --LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMS 175
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
Y ++ G +AI EM+ G++ F+ +AC +N++ G+Q+H + ++MGY
Sbjct: 176 AYVKNDQCG-DAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 234
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEM 246
V N L+ Y K A+ +F +M D +V+SW +IS +N D A+ L +M
Sbjct: 235 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+ G+ PN ++ A + GR IHG IK N S+ + L+ MYA+ +
Sbjct: 295 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV 365
D+ KVFD +S R++I WNALISG + G A F+G+ KE N T +VL +
Sbjct: 355 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKST 414
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ E S ++ H+ K+G D V + L+D Y K + ++ RVF E A
Sbjct: 415 ASLEAASAT--RQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIA 472
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
T++I+AL++ E + F EM KG+ PD S+L C +G+ + ++
Sbjct: 473 VTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532
Query: 486 KDYHIEPSPDHYS--CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
K + D ++ +V + G +E+AE +P G+ +++G HG+
Sbjct: 533 KRQFMS---DAFAGNALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGH-- 586
Query: 544 MGERIADALMKMEPAG 559
G+R + +M G
Sbjct: 587 -GKRALELFGRMVDEG 601
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 229/451 (50%), Gaps = 14/451 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G+ D A IF + + D+VSWN ++SG A+ L+M G+V +
Sbjct: 244 VDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNV 303
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ L C F G Q+H ++K DS+ Y+G L+ MY++ L +A +VFD
Sbjct: 304 FMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDW 363
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++D + WNA++SG + G + EA + ++GL ++ + + + +
Sbjct: 364 MSHRDLILWNALISGCSHGGRHD-EAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASA 422
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
+Q+H ++ K+G+ V N L+ +Y KC DA +VF ++I+ T+MI+
Sbjct: 423 TRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQ 482
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E A+ LF EM G+ P+ L++A + + ++G+ +H IK F+S+
Sbjct: 483 CDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFA 542
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ YA+ S++D+E F L R ++SW+A+I G AQ+G A++ F ++ E
Sbjct: 543 GNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGI 602
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFE 410
PN T SVL A A + +R + + ++ G+D S ++D+ G+ G + +
Sbjct: 603 NPNHITMTSVLCACNHAGLVD--EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660
Query: 411 SQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ + N + + W A++ A H D E
Sbjct: 661 AMELVNSMPFQANASVWGALLGASRVHKDPE 691
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 206/417 (49%), Gaps = 17/417 (4%)
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
A T S L+ + L G LH+ ++K G + + N LI+ YS+ R ARRVFD
Sbjct: 4 AGTISQQLTRYAAAQALLPGAHLHANLLKSGFLASLR--NHLISFYSKCRRPCCARRVFD 61
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E+P+ VSW+++++ Y+ +G AI A M +G+ + + + +
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNG-LPRSAIQAFHGMRAEGVCCNEFALPVVLKCV---PDAQ 117
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMISMN 235
LG Q+H +++ G+G+ V V N L++ Y DA +VF +RN +SW ++S
Sbjct: 118 LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAY 177
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ DA+ +F EM G+ P + F +++A + + GR +H + ++ + +
Sbjct: 178 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDV 237
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
N L+ MY + + + +F+++ +++SWNALISG NG A++ +K
Sbjct: 238 FTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ-MKS 296
Query: 351 SK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S PN + S+L A A L G++ H +IK DSD +G L+DMY K +
Sbjct: 297 SGLVPNVFMLSSILKACAGAGAFDL--GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
++ +VF+ + W A+IS + G ++ + F + +G+ + T +VL
Sbjct: 355 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVL 411
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 149/295 (50%), Gaps = 14/295 (4%)
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
G +H +K+ FL+ S+ N LI+ Y++ + +VFDE+ +SW++L++ Y+
Sbjct: 23 GAHLHANLLKSGFLA--SLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 334 NGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
NGL +A+QAF G+ E N + VL V A+ G + H+ + G SD
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQ-----LGAQVHAMAMATGFGSDV 135
Query: 393 IVGSALLDMYGKRGSIFESQRVFNET-QEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
V +AL+ MYG G + +++RVF+E E++ +W ++SA ++ + F EM
Sbjct: 136 FVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVW 195
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
G++P F V+ C + I GR + +M+ E + +VDM ++GR++
Sbjct: 196 SGIQPTEFGFSCVVNACTGSRNIDAGRQVH-AMVVRMGYEKDVFTANALVDMYVKMGRVD 254
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLM 566
A + ++P +S +L+ C ++G+ R + L++M+ +G V M
Sbjct: 255 IASVIFEKMPDSDVVS-WNALISGCVLNGH---DHRAIELLLQMKSSGLVPNVFM 305
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/612 (33%), Positives = 328/612 (53%), Gaps = 23/612 (3%)
Query: 45 ALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR 104
A+ M G + Y L C++ LH +VK G ++++V +L+ Y R
Sbjct: 66 AMAMLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMR 125
Query: 105 WGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS 164
G +AR +FD+MP K+ V+W A+++GYT + +EA+ +EM+ G H + +
Sbjct: 126 CGASQDARSLFDQMPEKNVVTWTALITGYTVNSQL-LEALEVFVEMLEAGRYPSHYTLGA 184
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
+AC N +LG Q+HG +IK + S+GN L Y+K A + FR + D+N
Sbjct: 185 MLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKN 244
Query: 225 VISWTTMISMNRED------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
VI+WTTMIS ED ++LF +M +DGV PN+ T ++ + G+ +
Sbjct: 245 VITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQ 304
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ----- 333
C K + V N + +Y R ++ + F+E+ II+WNA+ISGYAQ
Sbjct: 305 AFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETA 364
Query: 334 ------NGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
A++ F + + + KP+ +TF S+L+ + ++L+ G++ H+ IK
Sbjct: 365 KDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSM--MALEQGEQIHAQTIKT 422
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
G SD +V SAL++MY K G I ++ + F E ++ WT++IS ++HG + + F
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLF 482
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
++M GVRP+ ITF+ VL+ C G+ K H FD M ++Y IEP DHY CMVDM R
Sbjct: 483 EDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVR 542
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLM 566
+GRL++A + + P ++ SL+ CR HGN+E+ AD L+++ P G +YVL+
Sbjct: 543 LGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLL 602
Query: 567 SNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
N+Y W VA +RK MK +G+ + SW + D ++ F + D TH S+E+Y+
Sbjct: 603 LNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIK--DKVYFFKANDKTHELSDELYQ 660
Query: 627 MAECLGSEMKYL 638
+ E L + K +
Sbjct: 661 LLENLLEKAKTI 672
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 232/480 (48%), Gaps = 29/480 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+N Y + G A +F+ + ++V+W +++G+ + +AL + M G
Sbjct: 120 VNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSH 179
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T L+ C G Q+H +K+ S +GN+L MY++ G L A R F
Sbjct: 180 YTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRM 239
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P+K+ ++W ++S +D +Y + ++M+ G+ + + TS S CG +L L
Sbjct: 240 VPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNL 299
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+ K+G T++ V N M Y + T +A + F M D ++I+W MIS
Sbjct: 300 GKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQ 359
Query: 234 ---MNRED---------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
++D A+ +F+ ++ + P+ TF ++ S +++G IH
Sbjct: 360 IMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQT 419
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IKT FLS+ V + L+ MY + ++D+ K F E+S R +++W ++ISGY+Q+G A+
Sbjct: 420 IKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAI 479
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SAL 398
Q F + +PN TF VL+A A L + ++K +PIV +
Sbjct: 480 QLFEDMRFAGVRPNEITFVCVLSACSYA---GLAEKAEHYFDMMKEEYKIEPIVDHYGCM 536
Query: 399 LDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVM---NQFKEMENKGV 454
+DM+ + G + ++ T E +E W+++++ HG+ E ++ E+ KG+
Sbjct: 537 VDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGI 596
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 199/422 (47%), Gaps = 36/422 (8%)
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIE------MMRKGLRLDHVSFTSAASACGHEKNL 175
D +WN Q+G +EA L ++ M+R+G + + C +L
Sbjct: 36 DKNNWNGRSIQAAQNGS-TMEAPLRPLDVGEAMAMLREGKTVQSAMYVPLLHVCVETGSL 94
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
+ +HG +K G + V L++ Y +C + DA +F +M ++NV++WT +I
Sbjct: 95 GGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGY 154
Query: 233 SMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++N + +A+ +F EM G P+ T +++A S N G +HG IK LS
Sbjct: 155 TVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSIT 214
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG------YAQNGLSLAAVQAF 344
S+ N L MYA+ S++ + + F + + +I+W +IS Y + GL+L
Sbjct: 215 SIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLM 274
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
GV+ PN +T SV++ G D++L G++ + K+G ++ V ++ + +Y +
Sbjct: 275 DGVL----PNEFTLTSVMSLCGTRLDLNL--GKQVQAFCFKIGCQTNIPVKNSTMYLYLR 328
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALAR---------HGDYE--SVMNQFKEMENKG 453
+G E+ R F E + S W A+IS A+ H + F+ ++
Sbjct: 329 KGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSA 388
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
++PD TF S+L+VC + +G + +K + + S +V+M + G +E+A
Sbjct: 389 MKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVN-SALVNMYNKCGCIEDA 447
Query: 514 EE 515
+
Sbjct: 448 TK 449
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 207/592 (34%), Positives = 323/592 (54%), Gaps = 49/592 (8%)
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
+ V+ N++I+ RWG + E+ +F MP KD SWN++++G+ Q D EA+ +
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQH-DRFEEALDWFV 145
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
M R L+ SF S SAC K+L+LG QIHG+ K Y V +G+ L+ YSKC
Sbjct: 146 RMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCG 205
Query: 209 VTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIH 263
+ G A +VF M ++NV+SW +I+ + +A+ F M G P++VT ++
Sbjct: 206 LVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVS 265
Query: 264 AISIGNLVKEGRMIHGLCIKTN-FLSEPSVCNCLITMYARFESMQDSEKVFDELSCR--- 319
A + KEG IH +K++ F ++ + N L+ MYA+ + ++ VFD + R
Sbjct: 266 ACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAV 325
Query: 320 ----------------------------EIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+I+SWNALI+GY QNG + A+ F + +ES
Sbjct: 326 SETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRES 385
Query: 352 K-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL------DSDPIVGSALLDMYGK 404
P YTFG++LNA D+ L G++ HSH++K G + D VG++L+DMY K
Sbjct: 386 VCPTHYTFGNLLNASANLADLEL--GRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMK 443
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GS+ E RVF EK +W +I A++G + F++M G +PD +T +
Sbjct: 444 CGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGT 503
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L C G++ +GR F SM K++ + P DHY+CMVD+LGR G LEEA++L+ +P P
Sbjct: 504 LCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQP 563
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
V SLL AC++H N+ +G+ +A+ + +++P SG YVL++N+Y+E G W +RK
Sbjct: 564 DAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRK 623
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
M+ +GV K+ G SW D+ +H F D HP+ +EIY + + L M+
Sbjct: 624 LMRRRGVVKQPGCSWIDIQ--SNVHVFMVKDKRHPQKKEIYSILKLLTKHMR 673
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 153/559 (27%), Positives = 254/559 (45%), Gaps = 97/559 (17%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTAL 64
G D++ +F+ + D SWN++++GF + D +AL + +RM+ V + ++ + L
Sbjct: 104 GFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGL 163
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
S C + G Q+H LI K +V++G+ LI YS+ G + ARRVFD M K+ V
Sbjct: 164 SACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVV 223
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
SWN +++ Y Q+G +EA+ A M G + D V+ S SAC + G QIH
Sbjct: 224 SWNCLITCYEQNGP-AIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHAR 282
Query: 185 SIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---------- 233
+K + + +GN L+ Y+KC +A VF RM RN +S TTM+S
Sbjct: 283 VVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKA 342
Query: 234 --------------------------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISI 267
E+A+ LF+ ++ + VCP TF L++A +
Sbjct: 343 ARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASAN 402
Query: 268 GNLVKEGRMIHGLCIKTNFL----SEPS--VCNCLITMYARFESMQDSEKVFDELSCREI 321
++ GR H +K F EP V N LI MY + S+++ +VF+ + ++
Sbjct: 403 LADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDH 462
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
+SWN +I GYAQNG + A++ F +++ KP+ T L A A
Sbjct: 463 VSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHA------------ 510
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR-VFNETQEKSEFA----WTAIISALAR 435
G + E +R F+ T+E +T ++ L R
Sbjct: 511 -------------------------GLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGR 545
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP-SP 494
G E + + M + PD++ + S+L+ C + I G+++ + K + I+P S
Sbjct: 546 AGCLEEAKDLIESMPKQ---PDAVVWSSLLSACKVHRNITLGKYVAE---KIFEIDPTSS 599
Query: 495 DHYSCMVDMLGRVGRLEEA 513
Y + +M +GR +A
Sbjct: 600 GPYVLLANMYSELGRWGDA 618
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 189/379 (49%), Gaps = 51/379 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++ Y K G A +F+ + ++VSWN +++ +E++ +AL RM +G D
Sbjct: 198 IDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDE 257
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT ++ +S C F G+Q+H+ +VK +++ +GNAL+ MY++ GR+ EAR VFD
Sbjct: 258 VTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFD 317
Query: 117 EMP-------------------------------NKDSVSWNAILSGYTQDGDYGVEAIL 145
MP KD VSWNA+++GYTQ+G+ E L
Sbjct: 318 RMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGEN--EEAL 375
Query: 146 ALIEMM-RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH------VSVGN 198
L M+ R+ + H +F + +A + +LELG+Q H +K G+ + VGN
Sbjct: 376 GLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGN 435
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCP 253
L+ Y KC + +VF M +++ +SW TMI + +A+ LF++M G P
Sbjct: 436 SLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKP 495
Query: 254 NDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
+ VT IG + A S LV+EG R + + L C++ + R +++++ +
Sbjct: 496 DHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDL 555
Query: 313 FDELSCR-EIISWNALISG 330
+ + + + + W++L+S
Sbjct: 556 IESMPKQPDAVVWSSLLSA 574
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 185/430 (43%), Gaps = 78/430 (18%)
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
D F C ++ + +HG I+ + V + N L+ Y KC A KVF
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 218 RRMHDRNVISWTTMISM------------------------------------NREDAVS 241
RM +RNV S+ ++IS E+A+
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
F M D ND +F + A S +K G IHGL K+ + + + + LI Y+
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFG 359
+ + + +VFD + + ++SWN LI+ Y QNG ++ A++A FG + E KP+ T
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEA-FGRMTELGFKPDEVTLA 261
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNE- 417
SV++A A + K G + H+ ++K +D I+G+AL+DMY K G + E++ VF+
Sbjct: 262 SVVSA--CATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRM 319
Query: 418 ------------------------------TQEKSEFAWTAIISALARHGDYESVMNQFK 447
++K +W A+I+ ++G+ E + F+
Sbjct: 320 PVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFR 379
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD---YHIEPSPDHY--SCMVD 502
++ + V P TF ++L + GR ++K + PD + + ++D
Sbjct: 380 MLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLID 439
Query: 503 MLGRVGRLEE 512
M + G +EE
Sbjct: 440 MYMKCGSVEE 449
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 128/282 (45%), Gaps = 34/282 (12%)
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII--------- 322
++ R +HG I+T F E + N LI +Y + + + KVFD +S R +
Sbjct: 41 RDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTL 100
Query: 323 ----------------------SWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFG 359
SWN++I+G+AQ+ A+ F + ++ N Y+FG
Sbjct: 101 MRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFG 160
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
S L+A +D LK G + H I K D +GS L+D Y K G + ++RVF+ +
Sbjct: 161 SGLSACSRLKD--LKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGME 218
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
EK+ +W +I+ ++G + F M G +PD +T SV++ C +G
Sbjct: 219 EKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQ 278
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ ++K + +VDM + GR+ EA + ++P
Sbjct: 279 IHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMP 320
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 209/632 (33%), Positives = 361/632 (57%), Gaps = 14/632 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
+Y +S + A IF+ +N+ D VS+N+++SG + SD AL +M + D +T
Sbjct: 305 LYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCIT 364
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++ LS C G+QLHS +K G+ +++ + +L+ +YS+ + A + F
Sbjct: 365 VASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTE 424
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ V WN +L Y Q + ++ +M +G+ + ++ S C L LG+
Sbjct: 425 TENIVLWNVMLVAYGQLDNLS-DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
QIH IK G+ +V V +VL+ Y+K A ++ RR+ + +V+SWT MI+ +
Sbjct: 484 QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD 543
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+ LF+EM G+ +++ F I A + +++G+ IH F ++ S+ N
Sbjct: 544 MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN 603
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKP 353
LI++YAR +Q++ F+++ + ISWN+L+SG AQ+G A+Q F +++ E++
Sbjct: 604 ALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEV 663
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N +T+GS ++A + +I K GQ+ HS ++K G DS+ V ++L+ +Y K GSI ++ R
Sbjct: 664 NMFTYGSAISAAASLANI--KQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWR 721
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
FN+ E++ +W A+I+ ++HG + F+EM+ G+ P+ +TF+ VL+ C G+
Sbjct: 722 EFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGL 781
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ +G F+SM K + + P +HY C+VD+LGR G+L+ A E + ++P + ++LL
Sbjct: 782 VKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLL 841
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
AC IH N+E+GER A L+++EP S +YVL+SN+YA W RK MK GV+K
Sbjct: 842 SACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKK 901
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
E G SW +V + +H F +GD HP + +IY
Sbjct: 902 EPGRSWIEVK--NAVHAFYAGDKLHPLTNQIY 931
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 251/497 (50%), Gaps = 16/497 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K+G + A +FN + DIV+W ++SG ++ ++A+ M+ +
Sbjct: 202 IDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTP 261
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS + F G QLH L++K+G SE YV N L+ +YSR +L+ A R+F
Sbjct: 262 YVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFST 321
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++D VS+N+++SG Q G + A+ +M R L+ D ++ S SAC L
Sbjct: 322 MNSRDGVSYNSLISGLVQQG-FSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK 380
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G Q+H +IK G + + L+ YSKC A+K F N++ W M+
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQ 440
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N D+ +F++M+++G+ PN T+ ++ + + G IH IKT F V
Sbjct: 441 LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYV 500
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
C+ LI MYA++ + + ++ L +++SW A+I+GY Q+ + A+Q F +E +
Sbjct: 501 CSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLF----EEME 556
Query: 353 PNAYTFGSV--LNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
F ++ +A+ A I +L+ GQ+ H+ G +D + +AL+ +Y + G I
Sbjct: 557 YRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQ 616
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E+ F + +K+ +W +++S LA+ G +E + F M + T+ S ++
Sbjct: 617 EAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAA 676
Query: 470 RNGMIHKGRHLFDSMLK 486
I +G+ + +LK
Sbjct: 677 SLANIKQGQQIHSMVLK 693
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 236/478 (49%), Gaps = 13/478 (2%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
GV + Y L CL ++LH I K G D E + ++L+ Y R G A
Sbjct: 53 GVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGA 112
Query: 112 RRVFDEMPNKDSVSWNAILSGYT-QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC- 169
+VFDE N+ SWN ++ + Q ++ V + M+ +G+ + +F AC
Sbjct: 113 VKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFR--RMLAEGITPNGYTFAGVLKACV 170
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
G + KQ+H + G+ + V N+L+ YSK A KVF + +++++W
Sbjct: 171 GGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWV 230
Query: 230 TMIS---MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
MIS N E+A+ LF +M + P ++ A + L + G +H L IK
Sbjct: 231 AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKW 290
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
F SE VCN L+ +Y+R + +E++F ++ R+ +S+N+LISG Q G S A++ F
Sbjct: 291 GFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELF 350
Query: 345 FGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ ++ KP+ T S+L+A + +L G + HSH IK G+ +D I+ +LLD+Y
Sbjct: 351 TKMQRDCLKPDCITVASLLSACASVG--ALHKGMQLHSHAIKAGMSADIILEGSLLDLYS 408
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K + + + F T+ ++ W ++ A + + F++M+ +G+ P+ T+ S
Sbjct: 409 KCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPS 468
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+L C G ++ G + ++K + + S ++DM + G+L A ++ ++P
Sbjct: 469 ILRTCTSLGALYLGEQIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 164/282 (58%), Gaps = 9/282 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K GQ AL I L D+VSW +++G+ + D +AL M G+ FD
Sbjct: 505 IDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDN 564
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ +++A+S C G Q+H+ G +++ + NALI++Y+R GR+ EA F++
Sbjct: 565 IGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK 624
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +K+++SWN+++SG Q G Y EA+ + M+R ++ ++ SA SA N++
Sbjct: 625 IGDKNNISWNSLVSGLAQSG-YFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQ 683
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+QIH + +K GY + V N L+S Y+K DA + F M +RNVISW MI+ +
Sbjct: 684 GQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQ 743
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+A+ LF+EM++ G+ PN VTF+G++ A S LVKEG
Sbjct: 744 HGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEG 785
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 168/344 (48%), Gaps = 9/344 (2%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M +G+R ++ ++ C +L ++H K G+ + + L+ Y +
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 210 TGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
A KVF +R+V SW MI + + LF+ M +G+ PN TF G++ A
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168
Query: 265 ISIGNLV-KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
G++ + +H F S P V N LI +Y++ ++ ++KVF+ + ++I++
Sbjct: 169 CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVT 228
Query: 324 WNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
W A+ISG +QNGL A+ F + E P Y SVL+A + L G++ H
Sbjct: 229 WVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFEL--GEQLHCL 286
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
+IK G S+ V + L+ +Y + + ++R+F+ + ++ ++IS L + G +
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ F +M+ ++PD IT S+L+ C G +HKG L +K
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIK 390
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 134/304 (44%), Gaps = 11/304 (3%)
Query: 229 TTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
T + + + L M GV N ++ L+ + E +H K+ F
Sbjct: 32 TLHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDG 91
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
EP + + L+ Y R + KVFDE S R + SWN +I + + F ++
Sbjct: 92 EPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRML 151
Query: 349 KES-KPNAYTFGSVLNA-VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
E PN YTF VL A VG DI+ + ++ HS G DS P+V + L+D+Y K G
Sbjct: 152 AEGITPNGYTFAGVLKACVGG--DIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNG 209
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I +++VFN K W A+IS L+++G E + F +M + P SVL+
Sbjct: 210 YIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLS 269
Query: 467 VCGRNGMIHKGRHLFDSMLK-DYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIPGG 523
+ + G L ++K +H E Y C +V + R +L AE + +
Sbjct: 270 ASTKIQLFELGEQLHCLVIKWGFHSET----YVCNGLVALYSRSRKLISAERIFSTMNSR 325
Query: 524 PGLS 527
G+S
Sbjct: 326 DGVS 329
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 223/663 (33%), Positives = 362/663 (54%), Gaps = 34/663 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVV--- 54
+N+Y K G F +F+ ++ + VSWN+++S FEK + AL A R L V
Sbjct: 136 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALE-AFRCMLDEDVEPS 194
Query: 55 -FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
F V+ + A S EG L G Q+H+ ++ G + ++ N L+ MY + G+L ++
Sbjct: 195 SFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKV 253
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
+ +D V+WN +LS Q+ + +EA+ L EM+ +G+ D + +S AC H +
Sbjct: 254 LLGSFEGRDLVTWNTVLSSLCQNEQF-LEALEYLREMVLEGVEPDGFTISSVLPACSHLE 312
Query: 174 NLELGKQIHGVSIKMGYGTHVS-VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
L GK++H ++K G S VG+ L+ Y C+ +VF M DR + W MI
Sbjct: 313 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMI 372
Query: 233 S---MNR--EDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+ N E+A+ LF EM G+ N T G++ A + IHG +K
Sbjct: 373 TGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGL 432
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG------LSLAA 340
+ V N L+ MY+R + ++++F ++ R++++WN +I+GY + L L
Sbjct: 433 DRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHK 492
Query: 341 VQAFFGVIKES------KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
+Q E KPN+ T ++L + A +L G+ H++ IK L +D V
Sbjct: 493 MQILERKASERASRVSLKPNSITLMTILPSCAALS--ALAKGKEIHAYAIKNNLATDVAV 550
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
GSAL+DMY K G + S++VF++ ++ W I+ A HG+ + ++ + M +GV
Sbjct: 551 GSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGV 610
Query: 455 RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
+P+ +TF+SV C +GM+++G +F +M KDY +EPS DHY+C+VD+LGR GR++EA
Sbjct: 611 KPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAY 670
Query: 515 ELVGQIPGG-PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEK 573
+L+ IP SLLGACRIH N+E+GE A L+++EP + YVL++N+Y+
Sbjct: 671 QLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 730
Query: 574 GDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGS 633
G W +R+ MK++GVRKE G SW + G D +H F +GD++HP+SE++ E L
Sbjct: 731 GLWYKATEVRRNMKAQGVRKEPGCSWIEHG--DEVHKFVAGDSSHPQSEKLRGYLETLWE 788
Query: 634 EMK 636
M+
Sbjct: 789 RMR 791
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 250/507 (49%), Gaps = 32/507 (6%)
Query: 40 DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNA 97
+A+ + M ++G+ D + L D + G Q+H+ + KFG +DS V V N
Sbjct: 76 EAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDS-VTVANT 134
Query: 98 LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL 157
L+ +Y + G +VFD + ++ VSWN+++S + + A+ A M+ + +
Sbjct: 135 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM-ALEAFRCMLDEDVEP 193
Query: 158 DHVSFTSAASACGH---EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
+ S A AC + + L +GKQ+H ++ G + N L++ Y K +
Sbjct: 194 SSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFII-NTLVAMYGKMGKLASSK 252
Query: 215 KVFRRMHDRNVISWTTMIS---MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN 269
+ R++++W T++S N + +A+ +EM L+GV P+ T ++ A S
Sbjct: 253 VLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLE 312
Query: 270 LVKEGRMIHGLCIKTNFLSEPS-VCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+++ G+ +H +K L E S V + L+ MY + + +VFD + R+I WNA+I
Sbjct: 313 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMI 372
Query: 329 SGYAQNGLSLAAVQAFFGVIKESK---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
+GYAQN A+ F ++ES N+ T V+ A + S K + H ++K
Sbjct: 373 TGYAQNEYDEEALLLFIE-MEESAGLLANSTTMAGVVPACVRSGAFSKK--EAIHGFVVK 429
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA---RHGDYESV 442
GLD D V +AL+DMY + G I ++R+F + +++ W II+ RH D +
Sbjct: 430 RGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLM 489
Query: 443 MNQFKEMENKG--------VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
+++ + +E K ++P+SIT +++L C + KG+ + +K+ ++
Sbjct: 490 LHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDV 548
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIP 521
S +VDM + G L+ + ++ QIP
Sbjct: 549 AVGSALVDMYAKCGCLQMSRKVFDQIP 575
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 119/242 (49%), Gaps = 10/242 (4%)
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
W L+ ++ L AV + +I KP+ + F ++L AV +D+ L G++ H+H
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDL--GKQIHAH 118
Query: 383 IIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
+ K G D + V + L+++Y K G +VF+ E+++ +W ++IS+L +E
Sbjct: 119 VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 178
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGM---IHKGRHLFDSMLKDYHIEPSPDHYS 498
+ F+ M ++ V P S T +SV C M + G+ + L+ E + +
Sbjct: 179 ALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG--ELNSFIIN 236
Query: 499 CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK-MEP 557
+V M G++G+L ++ L+G G ++ L C+ +E E + + +++ +EP
Sbjct: 237 TLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEP 296
Query: 558 AG 559
G
Sbjct: 297 DG 298
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/590 (35%), Positives = 329/590 (55%), Gaps = 28/590 (4%)
Query: 56 DAVTYSTALSFCLDHEGFL-FGLQLHSLIVK-FG---------LDSEVYVGNALITMYSR 104
+ V S LS C EG+L G LH+ I+K FG L + + V N+L++MYSR
Sbjct: 43 NQVDISFLLSLC-GREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSR 101
Query: 105 WGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFT 163
G L +A +VFD MP KD++SWN+ +SG +GD + ++ G+ + D + T
Sbjct: 102 CGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEM-GFRVFKQLYESGIYQFDQATLT 160
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
+ +AC + + K IH + GY ++VGN L+++Y +C +VF M ++
Sbjct: 161 TVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEK 220
Query: 224 NVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
NV++WT +IS E+++ LF +MR V PN +T++ + A S ++EGR IH
Sbjct: 221 NVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIH 280
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
GL K + + + L+ MY++ S++D+ K+F+ + +S ++ G AQNG
Sbjct: 281 GLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEE 340
Query: 339 AAVQAFFGVIKES---KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
++Q F ++K PN + ++L G D SL G++ HS IIK S+ V
Sbjct: 341 ESIQVFVKMVKNGVVIDPNMIS--AILGVFGI--DTSLALGKQIHSLIIKKSFGSNYFVN 396
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+ L++MY K G + +S ++F +++ +W ++I+A ARHG+ + ++EM +GV
Sbjct: 397 NGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVW 456
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P +TFLS+L C G++ KG +SM KDY I P +HY+C+VDM+GR G L EA++
Sbjct: 457 PTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKK 516
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
+ ++P PG+ V Q+LLGAC IHGN EMG+ A+ L P Y+L++N+Y+ +G
Sbjct: 517 FIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGK 576
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
W+ A K MK GV KE G SW ++ +H F D HP +E IY
Sbjct: 577 WKERARTIKKMKDMGVTKETGISWIEIE--KQIHSFVVEDRMHPHAEIIY 624
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 140/455 (30%), Positives = 230/455 (50%), Gaps = 21/455 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD-ALSFALRMNLI--GVV-FD 56
++MY + G+ A +F+++ D +SWN+ +SG + D + F + L G+ FD
Sbjct: 96 LSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFD 155
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T +T L+ C E +HSL+ +G + E+ VGNALIT Y R G RRVFD
Sbjct: 156 QATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFD 215
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNL 175
EM K+ V+W A++SG +Q Y E L L MR G + + +++ S+ AC + +
Sbjct: 216 EMSEKNVVTWTAVISGLSQGQFY--EESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAI 273
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM---I 232
G+QIHG+ K+G + + + LM YSKC DA K+F + + +S T + +
Sbjct: 274 REGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGL 333
Query: 233 SMN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ N E+++ +F +M +GV + ++ I + G+ IH L IK +F S
Sbjct: 334 AQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNY 393
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N LI MY++ + DS K+F + R +SWN++I+ +A++G A+Q + + E
Sbjct: 394 FVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLE 453
Query: 351 SK-PNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
P TF S+L+A VG E K S G+ + ++DM G+ G
Sbjct: 454 GVWPTDVTFLSLLHACAHVGLVE----KGMGFLESMAKDYGIGPRMEHYACVVDMMGRAG 509
Query: 407 SIFESQRVFNETQEKSE-FAWTAIISALARHGDYE 440
+ E+++ EK W A++ A + HG+ E
Sbjct: 510 LLNEAKKFIERLPEKPGILVWQALLGACSIHGNSE 544
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 216/453 (47%), Gaps = 38/453 (8%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIK-MGY--GTH-------VSVGNVLMSTYSK 206
++ V + S CG E L LG +H IK G+ G + + V N L+S YS+
Sbjct: 42 INQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSR 101
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPND-VTFIG 260
C DA KVF M ++ ISW + IS + E +FK++ G+ D T
Sbjct: 102 CGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTT 161
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
++ A +MIH L + E +V N LIT Y R +VFDE+S +
Sbjct: 162 VLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKN 221
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQR 378
+++W A+ISG +Q +++ FG +++ PN+ T+ S L A + +++ G++
Sbjct: 222 VVTWTAVISGLSQGQFYEESLK-LFGKMRDGPVDPNSLTYLSSLMACSGLQ--AIREGRQ 278
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H + K+G+ D + SAL+DMY K GS+ ++ ++F +E E + T I+ LA++G
Sbjct: 279 IHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGF 338
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-----DYHIEPS 493
E + F +M GV D ++L V G + + G+ + ++K +Y +
Sbjct: 339 EEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVN-- 396
Query: 494 PDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALM 553
+ +++M + G L+++ ++ +P +S S++ A HGN ++ + M
Sbjct: 397 ----NGLINMYSKCGDLDDSIKIFCWMPQRNSVS-WNSMIAAFARHGNGSRALQLYEE-M 450
Query: 554 KMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
++E +S L+A V ++ KGM
Sbjct: 451 RLEGVWPTDVTFLSLLHA----CAHVGLVEKGM 479
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 214/654 (32%), Positives = 366/654 (55%), Gaps = 19/654 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++ Y K G A +F+ + D VSWNT++SG+ K +DA M G D
Sbjct: 42 LDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDG 101
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++S L + F G Q+H L++K G + VYVG++L+ MY++ R+ +A F E
Sbjct: 102 YSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKE 161
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +SVSWNA+++G+ Q D L + M+ + +D +F + L
Sbjct: 162 ISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNL 221
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMIS--- 233
KQ+H +K+G +++ N ++S+Y+ C DA +VF + +++ISW +MI+
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFS 281
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+E A LF +M+ V + T+ GL+ A S G+ +HG+ IK S
Sbjct: 282 KHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTS 341
Query: 292 VCNCLITMYARFES--MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
N LI+MY +F + M+D+ +F+ L +++ISWN++I+G+AQ GLS AV+ FF ++
Sbjct: 342 ATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVK-FFSYLR 400
Query: 350 ES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
S K + Y F ++L + ++ +L+ GQ+ H+ K G S+ V S+L+ MY K G
Sbjct: 401 SSEIKVDDYAFSALLRS--CSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGI 458
Query: 408 IFESQRVFNETQEK-SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I +++ F + K S AW A+I A+HG + ++ F +M N+ V+ D +TF ++LT
Sbjct: 459 IESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILT 518
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G+I +G L + M Y I+P +HY+ VD+LGR G + +A+EL+ +P P
Sbjct: 519 ACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDP 578
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
VL++ LG CR G +EM ++A+ L+++EP +YV +S++Y++ WE A ++K M
Sbjct: 579 MVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMM 638
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNS 640
K +GV+K G+SW ++ + + F++ D ++P ++IY M + L EM++L+S
Sbjct: 639 KERGVKKVPGWSWIEIR--NQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQWLDS 690
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 224/451 (49%), Gaps = 14/451 (3%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H +K G S++YV N ++ Y ++G L A +FDEMP +DSVSWN ++SGYT G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 140 GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
+A M R G +D SF+ K +LG+Q+HG+ IK GY +V VG+
Sbjct: 83 E-DAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPN 254
L+ Y+KCE DA + F+ + + N +SW +I+ + + A L M +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 255 DV-TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
D TF L+ + + +H +K E ++CN +I+ YA S+ D+++VF
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 314 DEL-SCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDI 371
D L +++ISWN++I+G++++ L +A + F + + + + YT+ +L+A E
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK--RGSIFESQRVFNETQEKSEFAWTAI 429
G+ H +IK GL+ +AL+ MY + G++ ++ +F + K +W +I
Sbjct: 322 IF--GKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSI 379
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I+ A+ G E + F + + ++ D F ++L C + G+ + K
Sbjct: 380 ITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGF 439
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ + S ++ M + G +E A + QI
Sbjct: 440 V-SNEFVISSLIVMYSKCGIIESARKCFQQI 469
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
+ H IK +S+ V N ++ Y +F + + +FDE+ R+ +SWN +ISGY G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 336 LSLAAVQAFFGVIKESKPNA--YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
L F +K S + Y+F +L + + + L G++ H +IK G + +
Sbjct: 81 -KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDL--GEQVHGLVIKGGYECNVY 137
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK- 452
VGS+L+DMY K + ++ F E E + +W A+I+ + D ++ ME K
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA 197
Query: 453 GVRPDSITFLSVLTV 467
V D+ TF +LT+
Sbjct: 198 AVTMDAGTFAPLLTL 212
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 212/658 (32%), Positives = 347/658 (52%), Gaps = 80/658 (12%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D+ ++ L C+ + + ++H+ I+K SE+++ N L+ Y + G +AR+V
Sbjct: 17 LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76
Query: 115 FDEMPNK-------------------------------DSVSWNAILSGYTQDGDYGVEA 143
FD MP + D SWNA++SG+ Q D EA
Sbjct: 77 FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQH-DRFEEA 135
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
+ ++M + L+ SF SA SAC +L +G QIH + K Y V +G+ L+
Sbjct: 136 LRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDM 195
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTF 258
YSKC V A + F M RN++SW ++I+ ++ A+ +F M +GV P+++T
Sbjct: 196 YSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITL 255
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTN-FLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
++ A + + ++EG IH +K + + ++ + N L+ MYA+ + ++ VFD +
Sbjct: 256 ASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP 315
Query: 318 CREIIS-------------------------------WNALISGYAQNGLSLAAVQAFFG 346
R ++S WNALI+GY QNG + AV+ F
Sbjct: 316 LRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLL 375
Query: 347 VIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL------DSDPIVGSALL 399
+ +ES P YTFG++LNA D LK G++ H+ I+K G +SD VG++L+
Sbjct: 376 LKRESIWPTHYTFGNLLNACANLAD--LKLGRQAHTQILKHGFWFQSGEESDIFVGNSLI 433
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K G + + VF E+ +W A+I A++G + + F++M G +PD +
Sbjct: 434 DMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHV 493
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
T + VL+ C G++ +GR F SM + + P DH++CMVD+LGR G L+EA +L+
Sbjct: 494 TMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQT 553
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P P V SLL AC++HGN+E+G+ +A+ LM+++P SG YVL+SN+YAE G W+ V
Sbjct: 554 MPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDV 613
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKY 637
+RK M+ +GV K+ G SW ++ +H F D HP ++I+ + + L +MK+
Sbjct: 614 VRVRKQMRQRGVIKQPGCSWIEIQ--SRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKW 669
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 243/489 (49%), Gaps = 52/489 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++ K G+ D+A +F ++ PD SWN ++SGF + D +AL F + M+ V +
Sbjct: 92 LSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNE 151
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ +ALS C G+Q+H+LI K +VY+G+AL+ MYS+ G + A+R FD
Sbjct: 152 YSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDG 211
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++ VSWN++++ Y Q+G G +A+ + MM G+ D ++ S SAC +
Sbjct: 212 MAVRNIVSWNSLITCYEQNGPAG-KALEVFVMMMDNGVEPDEITLASVVSACASWSAIRE 270
Query: 178 GKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM----- 231
G QIH +K Y + +GN L+ Y+KC +A VF RM RNV+S T+M
Sbjct: 271 GLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYA 330
Query: 232 --------------------ISMN-----------REDAVSLFKEMRLDGVCPNDVTFIG 260
+S N E+AV LF ++ + + P TF
Sbjct: 331 RAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGN 390
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFL------SEPSVCNCLITMYARFESMQDSEKVFD 314
L++A + +K GR H +K F S+ V N LI MY + ++D VF+
Sbjct: 391 LLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFE 450
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTFGSVLNAVGAAEDISL 373
+ R+++SWNA+I GYAQNG A++ F ++ KP+ T VL+A A +
Sbjct: 451 RMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLV-- 508
Query: 374 KHGQR-CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE-TQEKSEFAWTAIIS 431
+ G+R HS ++GL + ++D+ G+ G + E+ + + W ++++
Sbjct: 509 EEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLA 568
Query: 432 ALARHGDYE 440
A HG+ E
Sbjct: 569 ACKVHGNIE 577
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + +F + D+VSWN ++ G+ ++ +AL +M + G D
Sbjct: 433 IDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDH 492
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
VT LS C L EG + HS+ + GL ++ + R G L EA
Sbjct: 493 VTMIGVLSACSHAGLVEEGRRY---FHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEAND 549
Query: 114 VFDEMP-NKDSVSWNAILS-----GYTQDGDYGVEAILAL 147
+ MP D+V W ++L+ G + G Y E ++ +
Sbjct: 550 LIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEI 589
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 213/602 (35%), Positives = 337/602 (55%), Gaps = 17/602 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFALRMNLI--GVVFDA 57
+NMYCK G + A +FN + ++VSW ++SG+ + D +F L LI G +
Sbjct: 194 INMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNK 253
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V++++ L C + GL+LH+ I + GL+ EV VGNALI+MY+R G L AR+VFD
Sbjct: 254 VSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDN 313
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ + + VSWNA+++GY + + EA +M +KG + D ++ S + C +L
Sbjct: 314 LRSPNRVSWNAMIAGYGEG--FMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNR 371
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK++H ++ + V+V L+S Y+KC +A KVF +M ++N +SW I+
Sbjct: 372 GKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCR 431
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ ++A +FK+MR D V P+ VTFI L+++ + + GR IHG + LS V
Sbjct: 432 HGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLV 491
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-S 351
N LI+MY R + D+ +VF + R++ SWNA+I+ Y Q+G + +A F E
Sbjct: 492 ANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGG 551
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
K + YTF +VL A+ ED L G++ H + K GL+ D + + L+ MY K GS+ ++
Sbjct: 552 KGDKYTFINVLRAIANLED--LDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDA 609
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDY-ESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
VF QEK W A+++A H D+ + + F++M +GV PDS T+ SVL C R
Sbjct: 610 YSVFKNVQEKDVVCWNAMLAAY-NHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACAR 668
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G I G+ F + LK+ +E HY+CMV LGR L+EAEE + +I + +
Sbjct: 669 LGAIEHGKK-FHTQLKEAAMETDTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWE 727
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYV-LMSNLYAEKGDWEMVAILRKGMKSK 589
SLL ACRIH NV + E + L+ ++ S + + N+YA G WE V++++ M+
Sbjct: 728 SLLVACRIHHNVGLAETAVEHLLDVKAQSSPAVCEQLMNIYAAAGRWEDVSVIKATMREA 787
Query: 590 GV 591
G+
Sbjct: 788 GL 789
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 258/475 (54%), Gaps = 11/475 (2%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
GV + Y+ L C+ + G ++H + + ++Y+ N LI+MYS+ G + +A
Sbjct: 46 GVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDA 105
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
VF M +KD VSWNA++SGY G G EA+ +M R+GL+ + SF S SAC
Sbjct: 106 NNVFQSMEDKDVVSWNAMISGYALHGR-GQEAVDLFYQMQREGLKPNQNSFISILSACQT 164
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
LE G+QIH K GY + V+V L++ Y KC A KVF M +RNV+SWT M
Sbjct: 165 PIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAM 224
Query: 232 ISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS + ++A LF+++ G PN V+F ++ A + N +++G +H +
Sbjct: 225 ISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGL 284
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
E V N LI+MYAR S+ ++ +VFD L +SWNA+I+GY + G A + F
Sbjct: 285 EQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRD 343
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ ++ +P+ +T+ S+L A+ L G+ HS I++ ++D V +AL+ MY K
Sbjct: 344 MQQKGFQPDRFTYASLLAIC--ADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKC 401
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GS+ E+++VFN+ EK+ +W A I+ RHG + FK+M V PD +TF+++L
Sbjct: 402 GSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLL 461
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
C +GR++ + + + + + ++ M GR G+L +A E+ +I
Sbjct: 462 NSCTSPEDFERGRYIHGK-IDQWGMLSNNLVANALISMYGRCGKLADAREVFYRI 515
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/521 (30%), Positives = 283/521 (54%), Gaps = 12/521 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K G + A +F ++ + D+VSWN ++SG+ + +A+ +M G+ +
Sbjct: 93 ISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQ 152
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ + LS C FG Q+HS I K G +S+V V ALI MY + G L AR+VF+E
Sbjct: 153 NSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNE 212
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++ VSW A++SGY Q GD EA + +++R G + + VSF S AC + +LE
Sbjct: 213 MRERNVVSWTAMISGYVQHGD-SKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQ 271
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
G ++H + G V VGN L+S Y++C +A +VF + N +SW MI+
Sbjct: 272 GLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE 331
Query: 236 --REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E+A LF++M+ G P+ T+ L+ + + G+ +H ++T + ++ +V
Sbjct: 332 GFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVA 391
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK- 352
LI+MYA+ S++++ KVF+++ + +SWNA I+ ++G A Q F + ++
Sbjct: 392 TALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVI 451
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ TF ++LN+ + ED + G+ H I + G+ S+ +V +AL+ MYG+ G + +++
Sbjct: 452 PDHVTFITLLNSCTSPED--FERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAR 509
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
VF + + +W A+I+A +HG S + F + +++G + D TF++VL
Sbjct: 510 EVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLE 569
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ GR + +++ +E + ++ M + G L +A
Sbjct: 570 DLDAGRKIH-GLVEKAGLEKDIRILTTLIKMYSKCGSLRDA 609
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 215/396 (54%), Gaps = 11/396 (2%)
Query: 152 RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
++G++ + + C K+L GK++H + + + N+L+S YSKC
Sbjct: 44 KRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIE 103
Query: 212 DANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
DAN VF+ M D++V+SW MIS ++AV LF +M+ +G+ PN +FI ++ A
Sbjct: 104 DANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQ 163
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNA 326
+++ G IH K + S+ +V LI MY + S++ + KVF+E+ R ++SW A
Sbjct: 164 TPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTA 223
Query: 327 LISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
+ISGY Q+G S A F +I+ ++PN +F S+L A D L+ G + H++I +
Sbjct: 224 MISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPND--LEQGLKLHAYIKQ 281
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
GL+ + +VG+AL+ MY + GS+ +++VF+ + + +W A+I+ G E
Sbjct: 282 AGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYG-EGFMEEAFRL 340
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLG 505
F++M+ KG +PD T+ S+L +C +++G+ L +++ E + ++ M
Sbjct: 341 FRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTA-WEADVTVATALISMYA 399
Query: 506 RVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+ G LEEA ++ Q+P +S + + C HG+
Sbjct: 400 KCGSLEEARKVFNQMPEKNAVS-WNAFIACCCRHGS 434
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 215/639 (33%), Positives = 346/639 (54%), Gaps = 18/639 (2%)
Query: 7 SGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSF--ALRMNLIGVVFDAVTYS 61
+G A +F+ + + DIVSW ++ G+ SD+A+ A+R+ V D S
Sbjct: 47 AGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVS 106
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
L C +G LH+ VK L S V+VG++L+ MY R G++ ++ RVF EMP +
Sbjct: 107 VVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFR 166
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
++V+W AI++G G Y E + EM D +F A AC + ++ GKQI
Sbjct: 167 NAVTWTAIITGLVHAGRYK-EGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQI 225
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNR---- 236
H I G+ V V N L + Y++C D +F M +R+V+SWT++I + NR
Sbjct: 226 HTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHE 285
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
E AV F +MR V PN+ TF + A + + + G +H SV N +
Sbjct: 286 EKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSM 345
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPN 354
+ MY+ + + +F + CR+IISW+ +I GY+Q G A + +F +++S KP
Sbjct: 346 MKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFK-YFSWMRQSGPKPT 404
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
+ S+L+ G L+ G++ H+ GL+ + V S L++MY K G+I E+ ++
Sbjct: 405 DFALASLLSVSGNMA--VLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKI 462
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F ET + TA+I+ A HG + ++ F++ G PDS+TF+SVLT C +G +
Sbjct: 463 FEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQL 522
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
G H F+ M + Y++ P+ +HY CMVD+L R GRL EAE+++ ++ V +LL
Sbjct: 523 DLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLI 582
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
AC+ G++E G R A+ +++++P + + V ++N+Y+ G+ E A +RK MK+KGV KE
Sbjct: 583 ACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKE 642
Query: 595 VGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGS 633
G W+ + D + F SGD HP SE+IY + E + S
Sbjct: 643 PG--WSSIKIKDCVSAFVSGDRFHPLSEDIYNILELVVS 679
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 227/452 (50%), Gaps = 16/452 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY + G+ +K+ +F+ + + V+W +++G + + L++ M+ + D
Sbjct: 144 LDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDT 203
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ AL C +G Q+H+ ++ G D+ V+V N+L TMY+ G + + +F+
Sbjct: 204 FTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFEN 263
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSW +++ Y + G + +A+ I+M + + +F + SAC L
Sbjct: 264 MSERDVVSWTSLIVAYNRIG-HEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVW 322
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR- 236
G+Q+H +G +SV N +M YS C A+ +F+ M R++ISW+T+I
Sbjct: 323 GEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQ 382
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E+A F MR G P D L+ +++ GR +H L +V
Sbjct: 383 AGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTV 442
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LI MY++ +++++ K+F+E +I+S A+I+GYA++G S A+ F +K
Sbjct: 443 RSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGF 502
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIF 409
P++ TF SVL A + + L + ++++ + P ++D+ + G +
Sbjct: 503 SPDSVTFISVLTACTHSGQLDLGFH---YFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLS 559
Query: 410 ESQRVFNE-TQEKSEFAWTAIISALARHGDYE 440
E++++ +E + +K + WT ++ A GD E
Sbjct: 560 EAEKMIDEMSWKKDDVVWTTLLIACKAKGDIE 591
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 223/642 (34%), Positives = 339/642 (52%), Gaps = 18/642 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+NMY K G F A +F+ L ++VS+ T++ G + ++A + R+ G +
Sbjct: 472 LNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQ 531
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T L + + +H+ K G D +VG+ALI YS G + +ARRVFD
Sbjct: 532 FVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDG 591
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLE 176
+ KD+V+W A++S Y+++ E L + MR + +L+ + TS A ++
Sbjct: 592 IVGKDAVAWTAMVSCYSEND--CPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVV 649
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
LGK IH S+K Y T V L+ Y+KC DA F + + +VI W+ MIS
Sbjct: 650 LGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYA 709
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E A LF M V PN+ + ++ A + L+ G+ IH IK SE
Sbjct: 710 QCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELF 769
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI +YA+ M+ S ++F L +SWN +I GY+++G AA+ F + S
Sbjct: 770 VGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAAS 829
Query: 352 KPNA-YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ T+ SVL A A S+ H + H I K +SD IV ++L+D Y K G I +
Sbjct: 830 VPSTQVTYSSVLRA--CASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRD 887
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F +E +W AIIS A HG F M ++ + ITF+++L+VCG
Sbjct: 888 AREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGS 947
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G LFDSM D+ IEPS +HY+C+V +LGR GRL +A +G IP P V +
Sbjct: 948 TGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWR 1007
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL +C +H NVE+G A+ ++++EP +YVL+SN+Y+ G + VA RK M++ G
Sbjct: 1008 ALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIG 1067
Query: 591 VRKEVGFSWADV-GDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
VRKE G SW ++ G++ H FS G HP I M E L
Sbjct: 1068 VRKEPGLSWVEIKGEV---HAFSVGSEDHPCMRVINAMLEWL 1106
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 247/509 (48%), Gaps = 17/509 (3%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNALITMYSRWGRLVEARR 113
D+ Y+ L C+ G +H +V+ G +++ N L+ MY++ G A R
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHE 172
VFD +P ++ VS+ ++ G+ G++ E AL + +R +G ++ T+
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEF--EEASALFQRLRWEGHEVNQFVLTTVLKLVVAM 544
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
L L +H + K+G+ + VG+ L+ YS C V DA +VF + ++ ++WT M+
Sbjct: 545 DTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMV 604
Query: 233 SMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S E+ + +F +MR+ N ++ A + V G+ IH +KT +
Sbjct: 605 SCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYD 664
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+E V L+ MYA+ +++D+ F+ ++ ++I W+ +IS YAQ + A + F +
Sbjct: 665 TERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRM 724
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++ S PN ++ SVL A + L G++ H+H IK+G +S+ VG+AL+D+Y K
Sbjct: 725 MRSSVSPNEFSLSSVLQACANMPLLDL--GKQIHNHAIKIGHESELFVGNALIDLYAKCS 782
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ S +F+ ++ +E +W II ++ G E+ ++ F+EM V +T+ SVL
Sbjct: 783 DMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLR 842
Query: 467 VCGRNGMI-HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
C I H G+ +++ + ++D + G + +A E+ +
Sbjct: 843 ACASTASINHVGQ--VHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKEC-D 899
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMK 554
L +++ +HG M + + D + K
Sbjct: 900 LVSWNAIISGYAVHGQAAMAQELFDMMSK 928
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 221/638 (34%), Positives = 359/638 (56%), Gaps = 23/638 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + ++V+WNT++S + K++ +A M +G+ V++
Sbjct: 174 VFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSD 233
Query: 73 FLFGLQLHSLIVKFGLD--SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL 130
+ L+ L+VK G D + +V ++ I MY+ G + AR +FD +++ WN ++
Sbjct: 234 YDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMI 293
Query: 131 SGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
GY Q+ + +EAI +++M + LD V+F SA +A + LELG+Q+H +K
Sbjct: 294 GGYVQN-NCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSS 352
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFK 244
V + N ++ YS+C G + KVF M +R+V++W TM+S ++ + L
Sbjct: 353 TILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVF 412
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
M+ G + VT L+ S + G+ H I+ E + + LI MYA+
Sbjct: 413 AMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDMYAKSG 471
Query: 305 SMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSV 361
+ ++++F++ S R+ +WNA+I+GY QNGLS F +I+++ +PNA T S+
Sbjct: 472 LITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASI 531
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L A I L G++ H I+ L+ + VG+ALLDMY K G+I ++ VF ET EK
Sbjct: 532 LPACNPMGTIGL--GKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEK 589
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+ +T +IS+ +HG E ++ F M G++PDS+TF+++L+ C G++ +G +F
Sbjct: 590 NSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIF 649
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV-GQIPGGPGLSVLQSLLGACRIHG 540
SM ++Y I+PS +HY C+ DMLGRVGR+ EA E V G G + SLLGACRIHG
Sbjct: 650 QSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHG 709
Query: 541 NVEMGERIADALMKMEPAGS--GSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
E+G+ +A+ L++ME S G +VL+SN+YA +G+W+ V +RK M+ KG+ KE G S
Sbjct: 710 EFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCS 769
Query: 599 WADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
W +V ++ F S D+ HP+ EIY+M E L EMK
Sbjct: 770 WVEVA--GHVNCFMSRDHKHPQCAEIYQMLEKLAMEMK 805
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 164/619 (26%), Positives = 289/619 (46%), Gaps = 68/619 (10%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNL-IGVVFDAVTY 60
C+ G +AL +F+++ P V WNT++ GF ++ DAL F RM FD+ T+
Sbjct: 48 CRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTF 107
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE---------- 110
S+ L C G LH +++ S V N+L+ MYS V
Sbjct: 108 SSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNN 167
Query: 111 ---ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
RRVFD M ++ V+WN ++S Y + + +EA MMR G+R VSF +
Sbjct: 168 CDLVRRVFDTMRKRNVVAWNTMISWYVKT-ERLIEAFKMFRTMMRMGIRPTPVSFVNVFP 226
Query: 168 ACGHEKNLELGKQIHGVSIKMG--YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
A + + ++G+ +K+G + V + + Y++ A ++F +RN
Sbjct: 227 AVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNT 286
Query: 226 ISWTTMISMNRE-----DAVSLFKE-MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
W TMI + +A+ LF + M + +DVTF+ + AIS ++ GR +H
Sbjct: 287 EVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHA 346
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
+K++ + + + N +I MY+R S+ S KVF + R++++WN ++S + QNGL
Sbjct: 347 YILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDE 406
Query: 340 AVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
+ F + K+ ++ T ++L+ A+ S + G++ H+++I+ G+ + + S L
Sbjct: 407 GLMLVFAMQKQGFMVDSVTLTALLSL--ASNLRSQEIGKQAHAYLIRHGIQFEGM-DSYL 463
Query: 399 LDMYGKRGSIFESQRVF--NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
+DMY K G I +Q++F N ++ E W A+I+ ++G E F++M + VRP
Sbjct: 464 IDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRP 523
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLF---------------DSMLKDYH------------ 489
+++T S+L C G I G+ + ++L Y
Sbjct: 524 NAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVF 583
Query: 490 ---IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG---PGLSVLQSLLGACRIHGNVE 543
+E + Y+ M+ G+ G E A L + G P ++L AC G V+
Sbjct: 584 AETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVD 643
Query: 544 MGERIADAL---MKMEPAG 559
G RI ++ K++P+
Sbjct: 644 EGLRIFQSMEREYKIQPSA 662
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 229/467 (49%), Gaps = 24/467 (5%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS----FALRMNLIGVVFDAV 58
MY + G D A IF+ + WNT++ G+ +++ + F M V D V
Sbjct: 264 MYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDV 323
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ +AL+ + G QLH+ I+K +V + NA+I MYSR G + + +VF M
Sbjct: 324 TFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNM 383
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+D V+WN ++S + Q+G E ++ + M ++G +D V+ T+ S + ++ E+G
Sbjct: 384 LERDVVTWNTMVSAFVQNG-LDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIG 442
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISWTTMISMNR 236
KQ H I+ G + + L+ Y+K + A ++F + +DR+ +W MI+
Sbjct: 443 KQAHAYLIRHGIQFE-GMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYT 501
Query: 237 EDAVS-----LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ +S +F++M V PN VT ++ A + + G+ IHG I+
Sbjct: 502 QNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVF 561
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+ MY++ ++ +E VF E + +++ +IS Y Q+G+ A+ F ++
Sbjct: 562 VGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSG 621
Query: 352 -KPNAYTFGSVLNAVGAA--EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
KP++ TF ++L+A A D L+ Q K+ ++ A DM G+ G +
Sbjct: 622 IKPDSVTFVAILSACSYAGLVDEGLRIFQSMERE-YKIQPSAEHYCCVA--DMLGRVGRV 678
Query: 409 FES-QRVFNETQEKSEFA-WTAIISALARHGDYE---SVMNQFKEME 450
E+ + V +E + F W +++ A HG++E V N+ EME
Sbjct: 679 VEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLEME 725
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 222/654 (33%), Positives = 345/654 (52%), Gaps = 23/654 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+N Y K G A +F+ + + VS+ T++ G+ + ++AL R+ G +
Sbjct: 89 LNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNH 148
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T L + + +H+ K G D +VG ALI YS G + AR VFD
Sbjct: 149 FVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDG 208
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD+V+W A++S Y+++ D A+ +M G + + TSA A + L
Sbjct: 209 IVGKDAVTWTAMVSCYSEN-DIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALL 267
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK IHG S+K Y T VG L+ Y+KC DA+ +F + +VI W+ +IS
Sbjct: 268 GKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQ 327
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E A +F M V PN+ + G++ A + ++ G IH L IK + SE V
Sbjct: 328 SCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFV 387
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
N L+ MYA+ +M++S ++F L +SWN +I GY Q+G + A+ F +
Sbjct: 388 GNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHM 447
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
TF SVL A A S+KH + HS I K ++D IV ++L+D Y K G I ++
Sbjct: 448 LSTQVTFSSVLRA--CANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDA 505
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+VF E +W +IISA A HG + + F M ++ + +TF+S+L+VCG
Sbjct: 506 LKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGST 565
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++++G LF+SM+ D+ I+PS +HY+C+V +LGR GRL +A + +G IP P V ++
Sbjct: 566 GLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRA 625
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL +C +H NV +G A+ ++ +EP +YVL+SN+YA G + VA+ RK M++ GV
Sbjct: 626 LLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGV 685
Query: 592 RKEVGFSWADV-GDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
+KE G SW ++ G++ H FS G HP I M E +LN K R
Sbjct: 686 KKEAGLSWVEIKGEV---HAFSVGSADHPDMRIINAMLE-------WLNLKASR 729
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 240/508 (47%), Gaps = 13/508 (2%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNALITMYSRWGRLVEAR 112
D+ + L C+ G +H+ +V+ G + + N L+ Y++ G L AR
Sbjct: 43 LDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATAR 102
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
R+FD MP ++ VS+ ++ GY G++ EA+ + R+G ++H T+
Sbjct: 103 RLFDGMPERNRVSFVTLMQGYALRGEFE-EALELFRRLQREGHEVNHFVLTTILKVLVTM 161
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
L IH + K+G+ + VG L+ YS C A VF + ++ ++WT M+
Sbjct: 162 DAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMV 221
Query: 233 SMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S E+ A++ F +MR+ G PN + A + G+ IHG +KT +
Sbjct: 222 SCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYD 281
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+EP V L+ MYA+ ++D+ +F+ + ++I W+ LIS YAQ+ + A + F +
Sbjct: 282 TEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRM 341
Query: 348 IKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++ PN ++ VL A A L+ G++ H+ IK+G +S+ VG+AL+DMY K
Sbjct: 342 MRSFVVPNEFSLSGVLQA--CANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCR 399
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
++ S +F+ Q+ +E +W II + G E ++ F EM + +TF SVL
Sbjct: 400 NMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLR 459
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C I + S+++ + ++D + G + +A ++ I +
Sbjct: 460 ACANTSSIKHAVQI-HSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVV 518
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMK 554
S S++ A +HG + D + K
Sbjct: 519 S-WNSIISAYALHGRATNALELFDRMNK 545
>gi|224058449|ref|XP_002299515.1| predicted protein [Populus trichocarpa]
gi|222846773|gb|EEE84320.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/544 (37%), Positives = 307/544 (56%), Gaps = 18/544 (3%)
Query: 90 SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
S ++ NA+++MY+R GR V+A +VFDE+ D VSW + G DG VE ++
Sbjct: 7 SSMHFSNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERI-GTASDGHEAVELFRIVLS 65
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
+ GL ++ + + S G K L GKQI + K GY VSV N L+S Y KC
Sbjct: 66 L---GLDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQ 122
Query: 210 TGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHA 264
DA +VF M R+ +SW ++IS E+ A+ +F +MR + P T ++ A
Sbjct: 123 ICDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEA 182
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+S N K+ IH L +K F+ + S+ +CLIT Y R SM +S++VF E+ ++
Sbjct: 183 VSNSNNTKQVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHL 242
Query: 325 NALISGYAQNGL---SLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
N +I+ + + G +LA Q + + K ++ TF +L A A D+ L G+ HS
Sbjct: 243 NTMITTFVRAGYYTDALALYQTIWSL--HRKVDSRTFSIILKACSAITDMQL--GRAVHS 298
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
++K G D D V S+++D+Y K GSI ++++ F + S AW A++ A HG Y+
Sbjct: 299 LVLKTGFDQDSFVESSVIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQE 358
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
V + F +M G+ PD IT+L VL+ C G++ + RH DSM + + I P +HY+CM+
Sbjct: 359 VFDLFNKMSQFGIEPDEITYLGVLSSCCHGGLVKEARHYLDSMFELHGIIPHLEHYACMI 418
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG 561
D+LGRVG LE+A++ + +P P + + Q LL AC IHG+VE+G A L+++ P
Sbjct: 419 DLLGRVGLLEDAKKTIDHMPIQPDVHIWQILLSACNIHGHVELGRVAARKLLEIHPENES 478
Query: 562 SYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRS 621
+Y+L+SNLYA G W V LRK MK K +RKE G SW VG H F D +HP+S
Sbjct: 479 AYILLSNLYASVGMWNAVGRLRKEMKEKNLRKEPGSSWIQVGRKS--HTFFVNDTSHPQS 536
Query: 622 EEIY 625
+EIY
Sbjct: 537 KEIY 540
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 135/547 (24%), Positives = 244/547 (44%), Gaps = 62/547 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
M+MY + G+ A+ +F+ + PD+VSW + +A+ + +G+ + T
Sbjct: 16 MSMYARCGREVDAIKVFDEIAEPDVVSWTERIGTASDGHEAVELFRIVLSLGLDVNEYTL 75
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
LS + G Q+ +L K G V V NAL++MY + G++ +A RVF M
Sbjct: 76 INVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQICDACRVFYNMII 135
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+DSVSWN+++S +++G + +A+ +M L+ + S A + N + Q
Sbjct: 136 RDSVSWNSLISACSENG-FVNQALEVFYQMRELSLQPTIHTLASILEAVSNSNNTKQVIQ 194
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----N 235
IH + +K G+ VS+ + L++ Y +C ++ +VF + N++ TMI+
Sbjct: 195 IHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFVRAGY 254
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
DA++L++ + + TF ++ A S ++ GR +H L +KT F + V +
Sbjct: 255 YTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSFVESS 314
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGVIKE 350
+I +Y + S+ +EK F S + +WNA++ GYA +G F FG+
Sbjct: 315 VIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFGI--- 371
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ T+ VL++ CH ++K LD S+FE
Sbjct: 372 -EPDEITYLGVLSSC-------------CHGGLVK--------EARHYLD------SMFE 403
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ + + +I L R G E K +++ ++PD + +L+ C
Sbjct: 404 LHGIIPHLEH-----YACMIDLLGRVGLLEDAK---KTIDHMPIQPDVHIWQILLSACNI 455
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCM-------VDMLGRVGRL--EEAEELVGQIP 521
+G + GR +L+ I P + + V M VGRL E E+ + + P
Sbjct: 456 HGHVELGRVAARKLLE---IHPENESAYILLSNLYASVGMWNAVGRLRKEMKEKNLRKEP 512
Query: 522 GGPGLSV 528
G + V
Sbjct: 513 GSSWIQV 519
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 172/338 (50%), Gaps = 18/338 (5%)
Query: 188 MGY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--SMNREDAVSLF 243
MG+ G+ + N +MS Y++C DA KVF + + +V+SWT I + + +AV LF
Sbjct: 1 MGFLRGSSMHFSNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERIGTASDGHEAVELF 60
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
+ + G+ N+ T I ++ I + G+ I LC KT + SV N L++MY +
Sbjct: 61 RIVLSLGLDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKC 120
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVL 362
+ D+ +VF + R+ +SWN+LIS ++NG A++ F+ + + S +P +T S+L
Sbjct: 121 GQICDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASIL 180
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
AV + + K + HS ++K G D + S L+ YG+ S+ ES+RVF E + +
Sbjct: 181 EAVSNSNNT--KQVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVN 238
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
+I+ R G Y + ++ + + + DS TF +L C + GR +
Sbjct: 239 LVHLNTMITTFVRAGYYTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHS 298
Query: 483 SMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+LK D +E S ++D+ + G + +AE+
Sbjct: 299 LVLKTGFDQDSFVESS------VIDIYCKCGSIGQAEK 330
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 191/566 (33%), Positives = 316/566 (55%), Gaps = 10/566 (1%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
GL +H +VK+G ++ V NALI+ Y++ R+ +A VFDEMP +D +SWN+I+ G
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+G Y +A+ + M +G LD + S AC +G +HG S++ G + S
Sbjct: 63 NGLYD-KAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNR----EDAVSLFKEMRLDG 250
+GN L+ YS C NK+FR M +NV+SWT MI S R + LF+EM L+G
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
+ P+ + A + +K G+ +HG I+ V N L+ MY + M+++
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEAR 241
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAED 370
+FD ++ ++ ISWN LI GY+++ L+ A F ++ + +PNA T +L A AA
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACILPA--AASL 299
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
SL+ G+ H++ ++ G D V +AL+DMY K G++ ++R+F+ K+ +WT +I
Sbjct: 300 SSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMI 359
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
+ HG + F++M+ G++PD+ +F ++L C +G+ +G F++M ++ I
Sbjct: 360 AGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRI 419
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIAD 550
EP HY+CMVD+L G L+EA E + +P P S+ SLL CRIH NV++ E++A+
Sbjct: 420 EPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAE 479
Query: 551 ALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHG 610
+ ++EP +G YVL++N+YAE WE V L+ + +G+R+ G SW +V H
Sbjct: 480 MVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVR--GKAHI 537
Query: 611 FSSGDNTHPRSEEIYRMAECLGSEMK 636
F + + HP+ I + + M+
Sbjct: 538 FFAENRNHPQGMRIAEFLDDVARRMQ 563
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 149/543 (27%), Positives = 257/543 (47%), Gaps = 65/543 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y KS + + AL +F+ + DI+SWN+++ G + D A+ +RM L G D+
Sbjct: 26 ISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDS 85
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + + C+ G +H V+ GL SE +GNAL+ MYS ++F
Sbjct: 86 TTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRN 145
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ VSW A+++ YT+ G + A L EM +G+R D + TSA A ++L+
Sbjct: 146 MEQKNVVSWTAMITSYTRAGHFDKVAGL-FQEMGLEGIRPDVFAITSALDAFAGNESLKH 204
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GK +HG +I+ G + V N LM Y KC +A +F + ++ ISW T+I
Sbjct: 205 GKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSR 264
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S +A +LF EM L + PN VT ++ A + + ++ GR +H ++ +L + V
Sbjct: 265 SNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFV 323
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ MY + ++ + ++FD L+ + +ISW +I+GY +G A+ A F +K S
Sbjct: 324 ANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAI-ALFEQMKGSG 382
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+A +F ++L A SH S L D E
Sbjct: 383 IQPDAGSFSAILYAC---------------SH-------------SGLRD---------E 405
Query: 411 SQRVFNETQEKSEFA-----WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
R FN + + + ++ L G+ + ++ +E + PDS ++S+L
Sbjct: 406 GWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEA---YEFIETMPIEPDSSIWVSLL 462
Query: 466 TVCGRNGMIHKGRHLFDSMLK-DYHIEP-SPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
C IH+ L + + + + +EP + +Y + ++ R E +L ++ GG
Sbjct: 463 RGC----RIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKV-GG 517
Query: 524 PGL 526
GL
Sbjct: 518 RGL 520
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 148/286 (51%), Gaps = 4/286 (1%)
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
+G ++HG +K F ++ +VCN LI+ YA+ ++D+ VFDE+ R+IISWN++I G A
Sbjct: 2 DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61
Query: 333 QNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
NGL AV+ F + E + ++ T SV+ A + + G H + ++ GL S+
Sbjct: 62 SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFI--GGVVHGYSVRTGLISE 119
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+G+ALLDMY + ++F ++K+ +WTA+I++ R G ++ V F+EM
Sbjct: 120 TSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGL 179
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
+G+RPD S L N + G+ + +++ IE + +++M + G +E
Sbjct: 180 EGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRN-GIEEVLPVANALMEMYVKCGYME 238
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
EA + + +S + G R + E + L+++ P
Sbjct: 239 EARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRP 284
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 361/646 (55%), Gaps = 15/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY + G +A +F L D+ +W ++ + + D AL +M V+
Sbjct: 46 IQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTK 105
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY L+ C E G+++H I++ G + +V+VG ALI MY++ G + A F
Sbjct: 106 VTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKR 165
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++D VSW A+++ Q + + L M G+ + ++ + +A G L
Sbjct: 166 LEHRDVVSWTAMIAACVQHDQFALARWL-YRRMQLDGVVPNKITLYTVFNAYGDPNYLSE 224
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK ++G+ + V V N ++ + + GDA ++F M DR+V++W +I++
Sbjct: 225 GKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQ 284
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N +AV LF ++ DGV ND+TF+ +++ + + +G++IH L + + + V
Sbjct: 285 NENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVV 344
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-S 351
L+++Y R E+ + K+F ++ +++I+W + YAQNG A+Q F + E
Sbjct: 345 ATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGR 404
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P + T +VL+ A +L+ G++ HSHII+ + +V +AL++MYGK G + E+
Sbjct: 405 RPTSATLVAVLDT--CAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEA 462
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
VF + ++ W +++ A A+HG Y+ + F +M+ GV+ D+++F+SVL+ +
Sbjct: 463 MSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHS 522
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG-PGLSVLQ 530
G + G F +ML+D+ I P+P+ Y C+VD+LGR GR++EA ++V ++ G P +
Sbjct: 523 GSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWM 582
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGACR H + + A+ +++ +P+ SG+YV++SN+YA GDW+ V +RK M+S+G
Sbjct: 583 TLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRG 642
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V+KE G S ++ ++ +H F GD +HPR IY + L SEM+
Sbjct: 643 VKKEPGRSSIEI--LNRVHEFLEGDRSHPRRHPIYAELDVLNSEMR 686
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 254/493 (51%), Gaps = 15/493 (3%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D + L C + G ++H + G + V LI MY++ G + EA++VF
Sbjct: 3 DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 62
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ + KD +W ++ Y Q GDY A+ +M + + V++ + +AC ++L
Sbjct: 63 EILERKDVFAWTRMIGIYCQQGDYD-RALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+ G +IHG ++ G+ V VG L++ Y+KC A F+R+ R+V+SWT MI+
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 181
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A L++ M+LDGV PN +T + +A N + EG+ ++GL S+
Sbjct: 182 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDV 241
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N + M+ + D+ ++F+++ R++++WN +I+ Y QN AV+ FG +++
Sbjct: 242 RVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVR-LFGRLQQ 300
Query: 351 S--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
K N TF +LN + SL G+ H + + G D D +V +AL+ +YG+ +
Sbjct: 301 DGVKANDITFVLMLNVYTSL--TSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAP 358
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ ++F + K WT + A A++G + + F+EM+ +G RP S T ++VL C
Sbjct: 359 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 418
Query: 469 GRNGMIHKGRHLFDSMLKD-YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
+ KGR + ++++ + +E + + +++M G+ G++ EA + ++ L
Sbjct: 419 AHLAALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKMAKRDIL- 475
Query: 528 VLQSLLGACRIHG 540
V S+LGA HG
Sbjct: 476 VWNSMLGAYAQHG 488
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 4/265 (1%)
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ F+ L+ S V GR +H F VC LI MYA+ S+ ++++V
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
F+ L +++ +W +I Y Q G A+ F+ + +E P T+ ++LNA + E
Sbjct: 62 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE-- 119
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SLK G H I++ G + D VG+AL++MY K GS+ + F + + +WTA+I+
Sbjct: 120 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 179
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A +H + ++ M+ GV P+ IT +V G + +G+ ++ ++ +E
Sbjct: 180 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVY-GLVSSGVME 238
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEEL 516
+ V+M G G L +A L
Sbjct: 239 SDVRVMNSAVNMFGNAGLLGDARRL 263
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+ F ++L +A+++ HG+R H H+ G + + +V L+ MY + GS+ E+
Sbjct: 1 KPDTAFFVALLQRCSSAKNVD--HGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEA 58
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
Q+VF + K FAWT +I + GDY+ + F +M+ + V P +T++++L C
Sbjct: 59 QQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAST 118
Query: 472 GMIHKGRHLFDSMLK 486
+ G + +L+
Sbjct: 119 ESLKDGMEIHGQILQ 133
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 210/637 (32%), Positives = 346/637 (54%), Gaps = 22/637 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSF-ALRMNLIG---VVFDA 57
MY K G ++A+ +F ++ ++VSWN+++ GF E SF A R L+G V D
Sbjct: 145 MYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDV 204
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T T L C E G+ +H L VK GL+ E+ V N+LI MYS+ L EA+ +FD+
Sbjct: 205 ATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDK 264
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK---GLRLDHVSFTSAASACGHEKN 174
K+ VSWN+++ GY ++ D V L++ M+ ++ D + + C
Sbjct: 265 NDKKNIVSWNSMIGGYAREED--VCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSE 322
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L+ K++HG S + G ++ V N ++ Y++C + +VF M + V SW ++
Sbjct: 323 LQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCG 382
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + A+ L+ +M G+ P+ T L+ A S + G IHG ++ +
Sbjct: 383 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 442
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
P + L+++Y ++ +FD + R ++SWN +I+GY+QNGL A+ F ++
Sbjct: 443 PFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 502
Query: 350 ES-KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ +P +++ GA +S L+ G+ H +K L D V S+++DMY K G
Sbjct: 503 DGIQPYEI---AIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGC 559
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I SQR+F+ +EK +W II+ HG + + F++M G++PD TF +L
Sbjct: 560 IGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMA 619
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ G F+ ML ++IEP +HY+C+VDMLGR GR+++A L+ ++PG P
Sbjct: 620 CSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSR 679
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+ SLL +CRIHGN+ +GE++A+ L+++EP +YVL+SNL+A G W+ V +R MK
Sbjct: 680 IWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMK 739
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
G++K+ G SW +VG +H F GD P EE+
Sbjct: 740 DIGLQKDAGCSWIEVG--GKVHNFLIGDEMLPELEEV 774
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 264/522 (50%), Gaps = 18/522 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALS-FALRMNLIGVVFD 56
+ MY G + +F+ L ++ WN ++S + +++ DA+S F+ +++ D
Sbjct: 41 ITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPD 100
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T + C G +H + K L S+V+VGNALI MY + G + EA +VF+
Sbjct: 101 NFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFE 160
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM--RKGLRLDHVSFTSAASACGHEKN 174
MP ++ VSWN+I+ G++++G + E+ A EM+ + D + + C E++
Sbjct: 161 HMPERNLVSWNSIICGFSENG-FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEED 219
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-S 233
+E G +HG+++K+G + V N L+ YSKC +A +F + +N++SW +MI
Sbjct: 220 IEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGG 279
Query: 234 MNREDAVS----LFKEMRLDG--VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
RE+ V L ++M+ + + ++ T + ++ + ++ + +HG +
Sbjct: 280 YAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQ 339
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S V N I Y R ++ SE+VFD + + + SWNAL+ GYAQN A+ + +
Sbjct: 340 SNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQM 399
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
P+ +T GS+L A + SL +G+ H ++ GL DP +G +LL +Y G
Sbjct: 400 TDSGLDPDWFTIGSLLLACSRMK--SLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCG 457
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
F +Q +F+ + +S +W +I+ +++G + +N F++M + G++P I + V
Sbjct: 458 KPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCG 517
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG 508
C + + G+ L LK H+ S ++DM + G
Sbjct: 518 ACSQLSALRLGKELHCFALK-AHLTEDIFVSSSIIDMYAKGG 558
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 223/439 (50%), Gaps = 21/439 (4%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNA-LITMYSRWGRLVEARRVFDEMPNKD 122
L C + G +LH ++ +V N +ITMYS G ++R VFD++ K+
Sbjct: 5 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 64
Query: 123 SVSWNAILSGYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
WNAI+S YT++ + + LI + + D+ + AC +L LG+
Sbjct: 65 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEH--KPDNFTLPCVIKACAGLLDLGLGQI 122
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE--- 237
IHG++ KM + V VGN L++ Y KC + +A KVF M +RN++SW ++I E
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGF 182
Query: 238 --DAVSLFKEMRL--DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
++ + F+EM + + P+ T + ++ + +++G +HGL +K E V
Sbjct: 183 LQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVN 242
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK---- 349
N LI MY++ + +++ +FD+ + I+SWN++I GYA+ + F+ + K
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREE---DVCRTFYLLQKMQTE 299
Query: 350 ESKPNAYTFGSVLNAVGAA-EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
++K A F ++LN + E L+ + H + + GL S+ +V +A + Y + G++
Sbjct: 300 DAKMKADEF-TILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGAL 358
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S+RVF+ K+ +W A++ A++ D ++ + +M + G+ PD T S+L C
Sbjct: 359 CSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 418
Query: 469 GRNGMIHKGRHLFDSMLKD 487
R +H G + L++
Sbjct: 419 SRMKSLHYGEEIHGFALRN 437
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 113/222 (50%), Gaps = 7/222 (3%)
Query: 261 LIHAISIGNLVKEGRMIHGLC-IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
L+ A ++ GR +H + T F ++ + +ITMY+ S DS VFD+L +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQ 377
+ WNA++S Y +N L A+ F +I E KP+ +T V+ A D+ L GQ
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGL--GQ 121
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
H K+ L SD VG+AL+ MYGK G + E+ +VF E++ +W +II + +G
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENG 181
Query: 438 DYESVMNQFKEM--ENKGVRPDSITFLSVLTVCGRNGMIHKG 477
+ N F+EM + PD T ++VL VC I KG
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKG 223
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 7/147 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G + IF+ L D+ SWN +++G+ + +AL +M +G+ D
Sbjct: 551 IDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDD 610
Query: 58 VTYSTALSFCLDHEGFLF-GLQLHSLIVKF-GLDSEVYVGNALITMYSRWGRLVEARRVF 115
T++ L C H G + GL+ + ++ ++ ++ ++ M R GR+ +A R+
Sbjct: 611 FTFTGILMAC-SHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLI 669
Query: 116 DEMP-NKDSVSWNAILSGYTQDGDYGV 141
+EMP + DS W+++LS G+ G+
Sbjct: 670 EEMPGDPDSRIWSSLLSSCRIHGNLGL 696
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 220/660 (33%), Positives = 354/660 (53%), Gaps = 42/660 (6%)
Query: 11 DKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTAL--SFCL 68
D+A +F+ + NPD+ +N ++ F ++ S AV+ T L S L
Sbjct: 59 DQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSS-------------AVSLYTHLRKSTPL 105
Query: 69 DHEGFLFGLQLH--------------SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ + F + + S++ FG S+++VG+A++ Y ++ R+ AR+V
Sbjct: 106 EPDNFTYAFVISGASSLGLGLLLHAHSIVAGFG--SDLFVGSAIVACYFKFSRVAAARKV 163
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD M +D+V WN ++SG ++ + EAIL +M++ G+ D + + ++
Sbjct: 164 FDGMLERDTVLWNTMVSGLVKNSCFD-EAILIFGDMVKGGIGFDSTTVAAVLPGVAELQD 222
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
L LG I +++K+G+ +H V L YSKC A +F ++ +++S+ MIS
Sbjct: 223 LALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISG 282
Query: 234 ----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
E +V LFKE+ + G N + +GLI + R IHG C K+ +S
Sbjct: 283 YTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSN 342
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV L T+Y+R ++ + +FDE S + + SWNA+ISGYAQNGL+ A+ F + K
Sbjct: 343 SSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQK 402
Query: 350 -ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E +PN T S+L+A +SL G+ H I + +S+ V +AL+DMY K GSI
Sbjct: 403 CEVRPNPVTVTSILSACAQLGALSL--GKWVHDLINRESFESNIFVSTALIDMYAKCGSI 460
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E+QR+F+ EK+ W A+IS HG +N F EM + V P +TFLSVL C
Sbjct: 461 TEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYAC 520
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +G +F SM+ D+ EP P+HY+CMVD+LGR G L++A + + ++P PG V
Sbjct: 521 SHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPV 580
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LLGAC IH + + +D L +++P G YVL+SN+Y+ ++ A +R +K
Sbjct: 581 WGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKR 640
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+ + K G + +V + LH F+SGD +HP++ IY M E L +M+ + E AL
Sbjct: 641 RKLAKTPGCTLIEVANT--LHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTAL 698
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 213/451 (47%), Gaps = 24/451 (5%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y K + A +F+ + D V WNT++SG K+ D+A+ M G+ FD+ T
Sbjct: 151 YFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTV 210
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ L + + G+ + L +K G S YV L +YS+ G + AR +F ++
Sbjct: 211 AAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQ 270
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
D VS+NA++SGYT + + E+ + L E++ G +++ S +L L +
Sbjct: 271 PDLVSYNAMISGYTCNNE--TESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTR 328
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN---- 235
IHG K G ++ SV L + YS+ A +F ++++ SW MIS
Sbjct: 329 CIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNG 388
Query: 236 -REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
E A+SLF+EM+ V PN VT ++ A + + G+ +H L + +F S V
Sbjct: 389 LTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVST 448
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI MYA+ S+ +++++F + + ++WNA+ISGY +G A+ F ++ P
Sbjct: 449 ALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSP 508
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQR-----CHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
TF SVL A A + + G H H G + P + ++D+ G+ G++
Sbjct: 509 TGVTFLSVLYACSHAGLV--REGDEIFRSMVHDH----GFEPLPEHYACMVDLLGRAGNL 562
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGD 438
++ + E W A++ A H D
Sbjct: 563 DKALDFIRKMPVEPGPPVWGALLGACMIHKD 593
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 14/311 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYST 62
+Y K G+ + A +F + PD+VS+N ++SG+ +++ S + V + V S+
Sbjct: 251 LYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSS 310
Query: 63 ALSFCLDHEGFLFG-LQL----HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ L F FG L L H K G+ S V AL T+YSR + AR +FDE
Sbjct: 311 IVG--LIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDE 368
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
K SWNA++SGY Q+G +AI EM + +R + V+ TS SAC L L
Sbjct: 369 SSEKSLASWNAMISGYAQNG-LTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSL 427
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK +H + + + +++ V L+ Y+KC +A ++F M ++N ++W MIS
Sbjct: 428 GKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGL 487
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEPS 291
+A++LF EM V P VTF+ +++A S LV+EG + + F P
Sbjct: 488 HGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPE 547
Query: 292 VCNCLITMYAR 302
C++ + R
Sbjct: 548 HYACMVDLLGR 558
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 219/638 (34%), Positives = 358/638 (56%), Gaps = 23/638 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + ++V+WNT++S + K++ +A M +G+ V++
Sbjct: 174 VFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMND 233
Query: 73 FLFGLQLHSLIVKFGLD--SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL 130
+ L+ L+VK G D + +V ++ I MY+ G + AR +FD +++ WN ++
Sbjct: 234 YDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMI 293
Query: 131 SGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
GY Q+ + +EAI +++M + LD V+F SA +A + L+LG+Q+H +K
Sbjct: 294 GGYVQN-NCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSS 352
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFK 244
V + N ++ YS+C G + KVF M +R+V++W TM+S ++ + L
Sbjct: 353 TILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVF 412
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
EM+ G + VT L+ S + G+ H I+ E + LI MYA+
Sbjct: 413 EMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDGYLIDMYAKSG 471
Query: 305 SMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSV 361
+ ++++F++ S R+ +WNA+I+GY QNGLS F +I+++ +PNA T S+
Sbjct: 472 LITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASI 531
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L A I L G++ H I+ L+ + VG+ALLDMY K G+I ++ VF ET EK
Sbjct: 532 LPACNPMGTIGL--GKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEK 589
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+ +T +I + +HG E ++ F M G++PDS+TF+++L+ C G++ +G +F
Sbjct: 590 NSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIF 649
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV-GQIPGGPGLSVLQSLLGACRIHG 540
SM ++Y I+PS +HY C+ DMLGRVGR+ EA E V G G + SLLGACRIHG
Sbjct: 650 QSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHG 709
Query: 541 NVEMGERIADALMKMEPAG--SGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
E+G+ +A+ L++ME +G +VL+SN+YA +G+W+ V +RK M+ KG+ KE G S
Sbjct: 710 EFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCS 769
Query: 599 WADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
W +V ++ F S D+ HP+ EIY+M E L EMK
Sbjct: 770 WVEVA--GHVNCFMSRDHKHPQCAEIYQMLEKLAMEMK 805
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 171/650 (26%), Positives = 300/650 (46%), Gaps = 69/650 (10%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNL-IGVVFDAVTY 60
C+ G +AL +F+++ P V WNT++ GF ++ DAL F RM FD+ T+
Sbjct: 48 CRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTF 107
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE---------- 110
S+ L C G LH +++ S V N+L+ MYS V
Sbjct: 108 SSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNN 167
Query: 111 ---ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
RRVFD M ++ V+WN ++S Y + + +EA MMR G+R VSF +
Sbjct: 168 CDLVRRVFDTMRKRNVVAWNTMISWYVKT-ERLIEAFKMFRTMMRMGIRPTPVSFVNVFP 226
Query: 168 ACGHEKNLELGKQIHGVSIKMG--YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
A + + ++G+ +K+G Y V + + Y++ A ++F +RN
Sbjct: 227 AVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNT 286
Query: 226 ISWTTMISMNRE-----DAVSLFKE-MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
W TMI + +A+ LF + M + +DVTF+ + AIS + GR +H
Sbjct: 287 EVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHA 346
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
+K++ + + + N +I MY+R S+ S KVF + R++++WN ++S + QNGL
Sbjct: 347 YILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDE 406
Query: 340 AVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
+ F + K+ ++ T ++L+ A+ S + G++ H+++I+ G+ + + G L
Sbjct: 407 GLMLVFEMQKQGFMVDSVTLTALLSL--ASNLRSQEIGKQAHAYLIRHGIQFEGMDGY-L 463
Query: 399 LDMYGKRGSIFESQRVF--NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
+DMY K G I +Q++F N ++ E W A+I+ ++G E F++M + VRP
Sbjct: 464 IDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRP 523
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLF---------------DSMLKDYH------------ 489
+++T S+L C G I G+ + ++L Y
Sbjct: 524 NAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVF 583
Query: 490 ---IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG---PGLSVLQSLLGACRIHGNVE 543
+E + Y+ M+ G+ G E A L + G P ++L AC G V+
Sbjct: 584 AETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVD 643
Query: 544 MGERIADAL---MKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
G RI ++ K++P+ S Y ++++ G KG+ +G
Sbjct: 644 EGLRIFQSMEREYKIQPS-SEHYCCVADMLGRVGRVXEAYEFVKGLGEEG 692
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 227/467 (48%), Gaps = 24/467 (5%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS----FALRMNLIGVVFDAV 58
MY + G D A IF+ + WNT++ G+ +++ + F M D V
Sbjct: 264 MYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDV 323
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ +AL+ + G QLH+ I+K +V + NA+I MYSR G + + +VF M
Sbjct: 324 TFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNM 383
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+D V+WN ++S + Q+G E ++ + EM ++G +D V+ T+ S + ++ E+G
Sbjct: 384 LERDVVTWNTMVSAFVQNG-LDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIG 442
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR--MHDRNVISWTTMISMNR 236
KQ H I+ G + L+ Y+K + A ++F + +DR+ +W MI+
Sbjct: 443 KQAHAYLIRHGIQFE-GMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYT 501
Query: 237 EDAVS-----LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ +S +F++M V PN VT ++ A + + G+ IHG I+
Sbjct: 502 QNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVF 561
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+ MY++ ++ +E VF E + +++ +I Y Q+G+ A+ F ++
Sbjct: 562 VGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSG 621
Query: 352 -KPNAYTFGSVLNAVGAA--EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
KP++ TF ++L+A A D L+ Q K+ S+ A DM G+ G +
Sbjct: 622 IKPDSVTFVAILSACSYAGLVDEGLRIFQSMERE-YKIQPSSEHYCCVA--DMLGRVGRV 678
Query: 409 FES-QRVFNETQEKSEF-AWTAIISALARHGDYE---SVMNQFKEME 450
E+ + V +E + F W +++ A HG++E V N+ EME
Sbjct: 679 XEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEME 725
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 209/616 (33%), Positives = 346/616 (56%), Gaps = 25/616 (4%)
Query: 24 DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
++V+W +V+SG+ ++ + AL+ M GV + + AL C D G Q+H
Sbjct: 5 NVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVH 64
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
SL V+ G + ++G+ LI MYSR G L A+ VFD M + D V + +++S + ++G++
Sbjct: 65 SLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFE 124
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK-MGYGTH-VSVGN 198
+ A ALI+M+++GL+ + + T+ +AC LG+QIHG IK +G + V
Sbjct: 125 LAA-EALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSST 179
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCP 253
L+ YS+ A VF +H +NV+SW +M+ + E+A+ +F +M +GV P
Sbjct: 180 ALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDP 239
Query: 254 NDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
N+ ++ A SIG GR +H IK + +++ V N L++MY R +++ E +
Sbjct: 240 NEFALSIVLGACGSIG----LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAM 295
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
+++ +++SW IS QNG A+ + E PN Y F SVL++ A+
Sbjct: 296 LNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSS--CADVA 353
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SL G + H +K+G DS+ G+AL++MY K G + ++ F+ +W ++I
Sbjct: 354 SLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIH 413
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A+HGD + F +M + G++PD TFL VL C +GM+ +G F M+ Y
Sbjct: 414 GHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFT 473
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
P+P HY+CM+DMLGR GR +EA ++ +P P + ++LL +C++H N+++G+ AD
Sbjct: 474 PAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADR 533
Query: 552 LMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGF 611
LM++ S SYVLMSN+YA G+WE +R+ M GV+K+ G SW ++ + +H F
Sbjct: 534 LMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEIN--NEVHTF 591
Query: 612 SSGDNTHPRSEEIYRM 627
+S D +HP S+ IY+M
Sbjct: 592 ASRDMSHPNSDSIYQM 607
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 223/449 (49%), Gaps = 23/449 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+ MY + G A +F+ +++PD+V + +++S F ++ + A ++M G+ +
Sbjct: 83 IEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNE 142
Query: 58 VTYSTALSFCLDHEGFLFGLQLHS-LIVKFGLDSE-VYVGNALITMYSRWGRLVEARRVF 115
T +T L+ C + G Q+H LI K GL S+ VY ALI YSR G A+ VF
Sbjct: 143 HTMTTILTACPR----VLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVF 198
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D + K+ VSW +++ Y +DG EA+ +M+ +G+ + + + ACG ++
Sbjct: 199 DSLHCKNVVSWCSMMQLYIRDGRLE-EALQVFGDMISEGVDPNEFALSIVLGACG---SI 254
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
LG+Q+H +IK T + V N L+S Y + + + + ++ + +++SWTT IS N
Sbjct: 255 GLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISAN 314
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E A++L +M +G PN F ++ + + + +G H L +K SE
Sbjct: 315 FQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEI 374
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
N LI MY++ M + FD + ++ SWN+LI G+AQ+G + A++ F +
Sbjct: 375 CTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSN 434
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSI 408
KP+ TF VL +G ++ G+ +I + P + ++DM G+ G
Sbjct: 435 GIKPDDSTFLGVL--MGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRF 492
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARH 436
E+ R+ N+ E W ++++ H
Sbjct: 493 DEALRMINDMPFEPDALIWKTLLASCKLH 521
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 188/378 (49%), Gaps = 20/378 (5%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP K+ V+W +++SGYT++G EA LA+ +M+ G+ + + +A AC L
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGR--PEAALAMFADMVESGVAPNDFACNAALVACADLGALR 58
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+Q+H ++++ G+ +G+ L+ YS+C A +VF RM +V+ +T++IS
Sbjct: 59 AGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFC 118
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E A +M G+ PN+ T ++ A G+ IHG IK L S
Sbjct: 119 RNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP----RVLGQQIHGYLIKKIGLRSQS 174
Query: 292 V--CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V LI Y+R + ++ VFD L C+ ++SW +++ Y ++G A+Q F +I
Sbjct: 175 VYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMIS 234
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E PN + VL A G S+ G++ H IK L +D V +ALL MYG+ G +
Sbjct: 235 EGVDPNEFALSIVLGACG-----SIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLV 289
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E + + N+ + +WT ISA ++G E + +M ++G P+ F SVL+ C
Sbjct: 290 EELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSC 349
Query: 469 GRNGMIHKGRHLFDSMLK 486
+ +G LK
Sbjct: 350 ADVASLDQGMQFHCLALK 367
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
K+ AWT+++S R+G E+ + F +M GV P+ + L C G + G +
Sbjct: 4 KNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQV 63
Query: 481 FDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRI 538
++ + D + SC+++M R G L A+E+ ++ P + SL+ A
Sbjct: 64 HSLAVRAGF---AGDAWIGSCLIEMYSRCGSLPAAKEVFDRM-DSPDVVGYTSLISAFCR 119
Query: 539 HGNVEMGERIADALMKMEPAG 559
+G E+ A+AL++M G
Sbjct: 120 NGEFELA---AEALIQMLKQG 137
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 216/655 (32%), Positives = 348/655 (53%), Gaps = 29/655 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAVT 59
MY A F+ L ++ SW +++ F +S + L RM GV DAVT
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ TAL C D E G+++H ++V L+ + V NAL+ MY + G L A+RVF +M
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 120 -NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
++ +SW+ + + G+ EA+ M+ G++ + + SAC ++ G
Sbjct: 121 RTRNVISWSIMAGAHALHGNVW-EALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD--RNVISWTTMISM-- 234
+ IH G+ + + V N +M+ Y +C +A KVF M + R+V+SW M+S
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+DA+ L++ M+L P+ VT++ L+ A S V GR++H +
Sbjct: 240 HNDRGKDAIQLYQRMQLR---PDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 296
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF------ 345
V N L++MYA+ S ++ VFD++ R IISW +IS Y + L A F
Sbjct: 297 VGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELE 356
Query: 346 --GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
G + KP+A F ++LNA A+ +L+ G+ GL SD VG+A++++YG
Sbjct: 357 KNGSSQRVKPDALAFVTILNA--CADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYG 414
Query: 404 KRGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K G I E++R+F+ + + W A+I+ A+ G + F ME +GVRPDS +F+
Sbjct: 415 KCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFV 474
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDY-HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
S+L C G+ +G+ F SM +Y ++ + H+ C+ D+LGR GRL+EAEE + ++P
Sbjct: 475 SILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLP 534
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAI 581
P SLL ACR H +++ + +A+ L+++EP + YV +SN+YAE W VA
Sbjct: 535 VKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAK 594
Query: 582 LRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+RK M +GV+KE G S ++G +H F++GD+ HPR+ EI L S+MK
Sbjct: 595 VRKFMAEQGVKKERGVSTIEIGKY--MHDFATGDDAHPRNREIREELAKLHSQMK 647
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS----------DDALSFALRMNL 50
++MY K G +A +F+ + I+SW T++S + + L +
Sbjct: 302 VSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSS 361
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
V DA+ + T L+ C D G + GL S+ VG A++ +Y + G + E
Sbjct: 362 QRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEE 421
Query: 111 ARRVFDEMPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
ARR+FD + ++ V WNA+++ Y Q G EA+ M +G+R D SF S AC
Sbjct: 422 ARRIFDAVCSRPDVQLWNAMIAVYAQFGQ-SHEALKLFWRMEMEGVRPDSFSFVSILLAC 480
Query: 170 GHEKNLELGK 179
H + GK
Sbjct: 481 SHTGLEDQGK 490
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 207/647 (31%), Positives = 343/647 (53%), Gaps = 61/647 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K + D ++ F+++ + VSW+ +++G ++DD L M GV
Sbjct: 216 LDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQ 275
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ C G QLH +K ++V +G A + MY + L +A+++F+
Sbjct: 276 STFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNS 335
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+PN + S+NAI+ GY + KGL LD VS + A AC K
Sbjct: 336 LPNHNLQSYNAIIVGYARSD---------------KGLGLDEVSLSGAFRACAVIKGDLE 380
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G Q+HG+S+K +++ V N ++ Y KC +A VF M R+ +SW +I+
Sbjct: 381 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 440
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N E +SLF IH IK+ + V
Sbjct: 441 NGNEEKTLSLF---------------------------------IHNRIIKSRLGLDSFV 467
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
LI MY++ M+ +EK+ D L+ + ++SWNA+ISG++ S A + F +++
Sbjct: 468 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 527
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P+ +T+ ++L+ A ++++ G++ H+ IIK L SD + S L+DMY K G++ +
Sbjct: 528 DPDNFTYATILDT--CANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDF 585
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
Q +F + + W A++ A+HG E + F+ M+ + V+P+ TFL+VL CG
Sbjct: 586 QLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHM 645
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ KG H F SML +Y ++P +HYSC+VD++GR G++ +A EL+ +P + ++
Sbjct: 646 GLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRT 705
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL C+IHGNVE+ E+ A +++++EP S +YVL+SN+YA G W V LRK M+ G+
Sbjct: 706 LLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGL 765
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+KE G SW ++ +H F GD HPRS+EIY + L EMK++
Sbjct: 766 KKEPGCSWIEIK--SEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWV 810
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 150/526 (28%), Positives = 252/526 (47%), Gaps = 58/526 (11%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTY 60
Y G A +F+ + D+VSWN+++SG+ + D + L+M +G VFD T+
Sbjct: 118 YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTF 177
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ L C E G+Q+H L VK G D +V G+AL+ MY++ +L + + F MP
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPE 237
Query: 121 KDSVSWNAILSGYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K+ VSW+AI++G Q+ D G+E EM + G+ + +F S +C L LG
Sbjct: 238 KNWVSWSAIIAGCVQNDDLRGGLE---LFKEMQKAGVGVSQSTFASVFRSCAGLSALRLG 294
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNRE 237
Q+HG ++K +GT V +G + Y KC DA K+F + + N+ S+ +I R
Sbjct: 295 SQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS 354
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
D G+ ++V+ G A ++ EG +HGL +K+ S V N ++
Sbjct: 355 D----------KGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAIL 404
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYT 357
MY + ++ ++ VF+E+ R+ +SWNA+I+ + QNG + F
Sbjct: 405 DMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFI------------ 452
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
H+ IIK L D VG AL+DMY K G + +++++ +
Sbjct: 453 ----------------------HNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDR 490
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
E++ +W AIIS + E F +M GV PD+ T+ ++L C + G
Sbjct: 491 LAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELG 550
Query: 478 RHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
+ + ++K E D Y S +VDM + G +++ + + + P
Sbjct: 551 KQIHAQIIKK---ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 593
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 147/563 (26%), Positives = 270/563 (47%), Gaps = 67/563 (11%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+S C D + G Q H+ ++ V+V N LI MY + L A +VFD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 119 PNKDSVSWNAILSGYTQDGDYGV------------------------------EAILALI 148
P +D+VSWNA+L GY GD GV + I +
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
+M R G D +F +C ++ G QIHG+++KMG+ V G+ L+ Y+KC+
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 209 VTGDANKVFRRMHDRNVISWTTMIS--MNRED---AVSLFKEMRLDGVCPNDVTFIGLIH 263
+ + F M ++N +SW+ +I+ + +D + LFKEM+ GV + TF +
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
+ + + ++ G +HG +KT+F ++ + + MY + ++ D++K+F+ L + S
Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
+NA+I GYA++ L G+ + S A+ +V+ G E G + H
Sbjct: 344 YNAIIVGYARSDKGL-------GLDEVSLSGAFRACAVIK--GDLE------GLQVHGLS 388
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
+K S+ V +A+LDMYGK G++ E+ VF E + +W AII+A ++G+ E +
Sbjct: 389 MKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTL 448
Query: 444 NQFKEMENKGVRP----DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC 499
+ F + N+ ++ DS ++++ + + GM+ K L D + E + ++
Sbjct: 449 SLF--IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRL-----AEQTVVSWNA 501
Query: 500 MVDMLGRVGRLEEAEELVGQIPG---GPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
++ + EEA++ ++ P ++L C VE+G++I ++K E
Sbjct: 502 IISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE 561
Query: 557 PAGSGSYV--LMSNLYAEKGDWE 577
S +Y+ + ++Y++ G+ +
Sbjct: 562 -LQSDAYISSTLVDMYSKCGNMQ 583
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 207/637 (32%), Positives = 355/637 (55%), Gaps = 23/637 (3%)
Query: 3 MYCKSGQFDKALCIFNN--LNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
MY K G A +F+ + D VSWN+++S +ALS RM +GV +
Sbjct: 189 MYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNT 248
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ AL D G+ +H ++K ++VYV NALI MY++ GR+ +A RVF+
Sbjct: 249 YTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFES 308
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSWN +LSG Q+ Y +A+ +M G + D VS + +A G NL
Sbjct: 309 MLCRDYVSWNTLLSGLVQNELYS-DALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLK 367
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GK++H +I+ G +++ +GN L+ Y+KC F MH++++ISWTT+I+ +
Sbjct: 368 GKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQ 427
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAIS---IGNLVKEGRMIHGLCIKTNFLSE 289
+A++LF+++++ G+ + + ++ A S N ++E IHG K + L++
Sbjct: 428 NEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIRE---IHGYVFKRD-LAD 483
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ N ++ +Y + + + F+ + ++I+SW ++I+ NGL + A++ F+ + +
Sbjct: 484 IMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQ 543
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ +P++ S L+A A SLK G+ H +I+ G + + S+L+DMY G++
Sbjct: 544 TNIQPDSIAIISALSAT--ANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTV 601
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S+++F+ +++ WT++I+A HG + FK+M ++ V PD ITFL++L C
Sbjct: 602 ENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYAC 661
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G++ +G+ F+ M Y +EP P+HY+CMVD+L R LEEA V +P P +
Sbjct: 662 SHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEI 721
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LLGAC IH N E+GE A L++ + SG Y L+SN++A G W V +R MK
Sbjct: 722 WCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKG 781
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
G++K G SW +V + +H F + D +HP++++IY
Sbjct: 782 NGLKKNPGCSWIEVD--NKIHTFMARDKSHPQTDDIY 816
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 245/470 (52%), Gaps = 25/470 (5%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+S L C+ + G QLH+L++K L + ++ L+ MY + G L +A +VFDEM
Sbjct: 48 AHSLLLDLCVAAKALPQGQQLHALLLKSHLSA--FLATKLVLMYGKCGSLRDAVKVFDEM 105
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+ SWNA++ + G Y +EAI +M G+ +D +F S ACG LG
Sbjct: 106 SERTIFSWNALMGAFVSSGKY-LEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLG 164
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR--RMHDRNVISWTTMISM-- 234
+IHGV++K GYG V V N L++ Y KC G A +F M + +SW ++IS
Sbjct: 165 AEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV 224
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N +A+SLF+ M+ GV N TF+ + + + VK G IHG +K+N ++
Sbjct: 225 AEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVY 284
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE- 350
V N LI MYA+ M+D+ +VF+ + CR+ +SWN L+SG QN L A+ F +
Sbjct: 285 VANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSG 344
Query: 351 SKPNAYTFGSVLNAVGAA-EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+ SVLN + A+ +L G+ H++ I+ GLDS+ +G+ L+DMY K +
Sbjct: 345 QKPDQV---SVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVK 401
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC- 468
F EK +WT II+ A++ + +N F++++ KG+ D + SVL C
Sbjct: 402 YMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461
Query: 469 ---GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
RN + ++F L D ++ + +V++ G VG ++ A
Sbjct: 462 GLKSRNFIREIHGYVFKRDLADIMLQ------NAIVNVYGEVGHIDYARR 505
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 95/193 (49%), Gaps = 5/193 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+N+Y + G D A F ++ + DIVSW ++++ + +AL + + D+
Sbjct: 491 VNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDS 550
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ +ALS + G ++H +++ G E + ++L+ MY+ G + +R++F
Sbjct: 551 IAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHS 610
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +D + W ++++ G G +AI +M + + DH++F + AC H +
Sbjct: 611 VKQRDLILWTSMINANGMHG-CGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVE 669
Query: 178 GKQIHGVSIKMGY 190
GK+ + +K GY
Sbjct: 670 GKRFFEI-MKYGY 681
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 210/635 (33%), Positives = 346/635 (54%), Gaps = 16/635 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ Y ++G A +F+ + + D V WN +L+G+ K+ D+A + M ++
Sbjct: 189 IKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNS 248
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT++ LS C FG QLH L+V GL+ + V N L+ MY++ G L +ARR+FD
Sbjct: 249 VTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDM 308
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D V+WN ++SGY Q+G + EA EM+ ++ D ++F+S L
Sbjct: 309 MPKTDLVTWNGMISGYVQNG-FMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQ 367
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK+IH I+ G V + + L+ Y KC A K+F + +++ T MIS
Sbjct: 368 GKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVL 427
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
MN +A+ +F+ + + + N VT ++ A + + G+ +HG +K
Sbjct: 428 NGMN-NNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCY 486
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
V + ++ MYA+ + + + F +S ++ + WN++I+ +QNG A+ F + +
Sbjct: 487 VGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAG 546
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+K + + + L+A A +L +G+ H+ +++ SD SAL+DMY K G++
Sbjct: 547 TKYDCVSISAALSA--CANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDL 604
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ RVF+ +EK+E +W +II+A HG + +N F M G++PD +TFL++++ CG
Sbjct: 605 ACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGH 664
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G + +G H F M ++ I +HY+CMVD+ GR GRL EA ++ +P P V
Sbjct: 665 AGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWG 724
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGACR+HGNVE+ E + L ++P SG YVL+SN++A G WE V +R MK +G
Sbjct: 725 TLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERG 784
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
V+K G SW DV + H F + D +HP+S +IY
Sbjct: 785 VQKVPGCSWIDVNNTT--HMFVAADRSHPQSSQIY 817
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 153/527 (29%), Positives = 262/527 (49%), Gaps = 23/527 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+ MY G F A IF L WN ++ GF + D AL F +M G + D
Sbjct: 88 LGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDK 147
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + C G +H I G + +V+VG++LI YS G + +AR +FD
Sbjct: 148 YTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDR 207
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP+KD V WN +L+GY ++GD+ A +EM R + V+F S C E +
Sbjct: 208 MPSKDGVLWNVMLNGYVKNGDWD-NATGVFMEMRRTETNPNSVTFACVLSVCASEIMINF 266
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
G Q+HG+ + G V N L++ Y+KC DA ++F M ++++W MIS
Sbjct: 267 GSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQ 326
Query: 236 ---REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++A LF EM + P+ +TF + +S G +++G+ IH I+ + +
Sbjct: 327 NGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFL 386
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LI +Y + ++ + K+FD+ + +I+ A+ISGY NG++ A++ F +++E
Sbjct: 387 KSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERM 446
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ N+ T SVL A ++L G+ H HI+K G VGSA++DMY K G + +
Sbjct: 447 RANSVTLASVLPACAGLAALTL--GKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLA 504
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ F +K W ++I++ +++G E ++ F++M G + D ++ + L+ C
Sbjct: 505 HQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANL 564
Query: 472 GMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+H G+ + M++ D E S ++DM + G L+ A
Sbjct: 565 PALHYGKEIHAFMMRGAFRSDLFAE------SALIDMYSKCGNLDLA 605
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 130/460 (28%), Positives = 230/460 (50%), Gaps = 10/460 (2%)
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
+ L C D G G Q H+ ++ G+ +G L+ MY G ++A+ +F ++
Sbjct: 51 SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
S WN ++ G+T G + A+L +M+ G D +F ACG ++ LG+ +
Sbjct: 111 CSEPWNWMIRGFTMMGQFDF-ALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVV 169
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNR 236
H MG+ V VG+ L+ YS+ DA +F RM ++ + W M+ + +
Sbjct: 170 HDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDW 229
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
++A +F EMR PN VTF ++ + ++ G +HGL + + + V N L
Sbjct: 230 DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTL 289
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
+ MYA+ + D+ ++FD + ++++WN +ISGY QNG A F +I KP++
Sbjct: 290 LAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDS 349
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
TF S L + +E +L+ G+ H +II+ G+ D + SAL+D+Y K + ++++F
Sbjct: 350 ITFSSFLPLL--SEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIF 407
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
++ TA+IS +G + + F+ + + +R +S+T SVL C +
Sbjct: 408 DQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALT 467
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
G+ L +LK+ H S S ++DM + GRL+ A +
Sbjct: 468 LGKELHGHILKNGH-GGSCYVGSAIMDMYAKCGRLDLAHQ 506
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 210/632 (33%), Positives = 339/632 (53%), Gaps = 16/632 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + +IVSWN ++SG+ D AL ++M + V FD VT A+ C +
Sbjct: 211 LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGS 270
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G Q+H L +KF ++Y+ NAL+ MYS G L + ++F+ +PN+D+ WN+++S
Sbjct: 271 LKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISA 330
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH-EKNLELGKQIHGVSIKMGYG 191
Y G + EA+ I M +G++ D + S C L GK +H IK G
Sbjct: 331 YAAFGCHE-EAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMR 389
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEM 246
S+GN L+S Y++ K+F RM ++ISW TMI + R A LF+ M
Sbjct: 390 IDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERM 449
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
R + PN T I ++ A + GR IHG +K + + L MY
Sbjct: 450 RESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDE 509
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVG 366
+ +F+ R++ISWNA+I+ Y +N + A+ F +I E++PN+ T +VL++
Sbjct: 510 ATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEAEPNSVTIINVLSSF- 568
Query: 367 AAEDISLKHGQRCHSHIIKVG--LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+L GQ H+++ + G L D + +A + MY + GS+ ++ +F +++
Sbjct: 569 -THLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNII 627
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+W A+I+ +G M F +M G RP+ +TF+SVL+ C +G I G LF SM
Sbjct: 628 SWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSM 687
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
++D+++ P HYSC+VD+L R G ++EA E + +P P SV ++LL +CR + + +
Sbjct: 688 VQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQ 747
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
+ I + L K+EP +G+YVL+SN+YA G W V +R +K KG+RK G SW V
Sbjct: 748 AKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVK- 806
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ +H FS+GD +HP+S++IY L S M+
Sbjct: 807 -NQVHCFSAGDRSHPQSDKIYAKLSILLSSMR 837
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/535 (26%), Positives = 271/535 (50%), Gaps = 21/535 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ YCK G + A C+F+ +++ D+V WN ++ G+ ++A+ M + ++
Sbjct: 95 VDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNS 154
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFD 116
T L C G +H ++ G+ DS +V ALI Y R+ V +FD
Sbjct: 155 RTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRV-LPLLFD 213
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M ++ VSWNA++SGY GDY +A+ ++M+ ++ D V+ A AC +L+
Sbjct: 214 LMVVRNIVSWNAMISGYYDVGDY-FKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLK 272
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN- 235
LGKQIH ++IK + + + N L++ YS ++++F + +R+ W +MIS
Sbjct: 273 LGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYA 332
Query: 236 ----REDAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEP 290
E+A+ LF M+ +GV ++ T + ++ + + + +G+ +H IK+ +
Sbjct: 333 AFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDA 392
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
S+ N L++MY ++ +K+FD + +IISWN +I A+N L A + F ++E
Sbjct: 393 SLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACE-LFERMRE 451
Query: 351 S--KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
S KPN+YT S+L A ED++ L G+ H +++K ++ + + +AL DMY G
Sbjct: 452 SEIKPNSYTIISIL---AACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGD 508
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
++ +F ++ +W A+I++ ++ + F M ++ P+S+T ++VL+
Sbjct: 509 EATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEA-EPNSVTIINVLSS 567
Query: 468 CGRNGMIHKGRHLFDSMLKD-YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +G+ L + + + + + + M R G L+ AE + +P
Sbjct: 568 FTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 622
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 249/514 (48%), Gaps = 26/514 (5%)
Query: 24 DIVSWNTVL--SGFEKSDDA-LSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
D WN+V+ K+D A LS +M +GV+ + T L C G +H
Sbjct: 17 DPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIH 76
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
I L +V VG A++ Y + G + +AR VFD M ++D V WNA++ GY G Y
Sbjct: 77 RSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYE 136
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG-YGTHVSVGNV 199
EA+L + EM R+ LR + + + AC L LG+ +HG ++ G + ++ V
Sbjct: 137 -EAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATA 195
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPN 254
L+ Y + ++ +F M RN++SW MIS + A+ LF +M +D V +
Sbjct: 196 LIGFYLRFDMRV-LPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFD 254
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
VT + + A + +K G+ IH L IK F+ + + N L+ MY+ S++ S ++F+
Sbjct: 255 CVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFE 314
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFF-----GVIKESKPNAYTFGSVLNAVGAAE 369
+ R+ WN++IS YA G A+ F GV K+ + +V+ + E
Sbjct: 315 SVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDER-------TVVIMLSMCE 367
Query: 370 DIS--LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
+++ L G+ H+H+IK G+ D +G+ALL MY + + Q++F+ + +W
Sbjct: 368 ELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWN 427
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
+I ALAR+ F+ M ++P+S T +S+L C + GR + ++K
Sbjct: 428 TMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMK- 486
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ IE + + + DM G A +L P
Sbjct: 487 HSIEINQPLRTALADMYMNCGDEATARDLFEGCP 520
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 156/331 (47%), Gaps = 18/331 (5%)
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
N + +S + +M GV PN+ T ++ A + N V+ G+ IH T+ + + V
Sbjct: 33 NDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGT 92
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
++ Y + ++D+ VFD +S R+++ WNA++ GY G A+ + +E+ +P
Sbjct: 93 AVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRP 152
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-DSDPIVGSALLDMYGKRGSIFESQ 412
N+ T ++L A A ++ L G+ H + ++ G+ DS+P V +AL+ Y R +
Sbjct: 153 NSRTMVALLLACEGASELRL--GRGVHGYCLRNGMFDSNPHVATALIGFY-LRFDMRVLP 209
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F+ ++ +W A+IS GDY + F +M V+ D +T L + C G
Sbjct: 210 LLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELG 269
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPG--GPGLSV 528
+ G+ + +K +E D Y + +++M G LE + +L +P P +
Sbjct: 270 SLKLGKQIHQLAIKFEFVE---DLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNS 326
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+ S A H E D ++M+ G
Sbjct: 327 MISAYAAFGCH------EEAMDLFIRMQSEG 351
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF----EKSDDALSFALRMNLIGVVFD 56
+ MY + G A IF L +I+SWN +++G+ SD L+F+ +M G +
Sbjct: 602 ITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFS-QMLEDGFRPN 660
Query: 57 AVTYSTALSFCLDHEGFL-FGLQL-HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
VT+ + LS C H GF+ GLQL HS++ F + E+ + ++ + +R G + EAR
Sbjct: 661 GVTFVSVLSAC-SHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREF 719
Query: 115 FDEMP-NKDSVSWNAILS 131
D MP D+ W A+LS
Sbjct: 720 IDSMPIEPDASVWRALLS 737
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 360/646 (55%), Gaps = 15/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY + G +A +F L D+ +W ++ + + D AL +M V+
Sbjct: 47 IQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTK 106
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY L+ C E G+++H I++ G + +V+VG ALI MY++ G + A F
Sbjct: 107 VTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKR 166
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++D VSW A+++ Q + + L M G+ + ++ + +A G L
Sbjct: 167 LEHRDVVSWTAMIAACVQHDQFALARWL-YRRMQLDGVVPNKITLYTVFNAYGDPHYLSE 225
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK I+ + + V V N M+ + + GDA ++F M DR+V++W +I+
Sbjct: 226 GKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQ 285
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N +AV LF ++ DG+ ND+TF+ +++ + + +G++IH L + + + V
Sbjct: 286 NENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVV 345
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-S 351
L+++Y R E+ + K+F ++ +++I+W + YAQNG A+Q F + E
Sbjct: 346 ATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGR 405
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P + T +VL+ A +L+ G++ HSHII+ G + +V +AL++MYGK G + E+
Sbjct: 406 RPTSATLVAVLDT--CAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEA 463
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VF + ++ W +++ A A+HG Y+ + F +M+ G + D+++F+SVL+ +
Sbjct: 464 RSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHS 523
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG-PGLSVLQ 530
G + G F +ML+D+ I P+P+ Y C+VD+LGR GR++EA ++V ++ G P +
Sbjct: 524 GSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWM 583
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGACR H + + A+ +++ +P+ SG+YV++SN+YA GDW+ V +RK M+S+G
Sbjct: 584 TLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRG 643
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V+KE G S ++ ++ +H F GD +HPR IY + L SEM+
Sbjct: 644 VKKEPGRSSIEI--LNRVHEFLEGDRSHPRRHPIYAELDVLNSEMR 687
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 253/493 (51%), Gaps = 15/493 (3%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D + L C + G ++H + G + V LI MY++ G + EA++VF
Sbjct: 4 DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 63
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ + KD +W ++ Y Q GDY A+ +M + + V++ + +AC ++L
Sbjct: 64 EILERKDVFAWTRMIGIYCQQGDYD-RALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+ G +IHG ++ G+ V VG L++ Y+KC A F+R+ R+V+SWT MI+
Sbjct: 123 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 182
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A L++ M+LDGV PN +T + +A + + EG+ I+ L S+
Sbjct: 183 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDV 242
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N + M+ + D+ ++F+++ R++++WN +I+ Y QN AV+ FG +++
Sbjct: 243 RVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVR-LFGRLQQ 301
Query: 351 S--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
K N TF +LN + SL G+ H + + G D D +V +AL+ +YG+ +
Sbjct: 302 DGIKANDITFVLMLNVYTSL--TSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAP 359
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ ++F + K WT + A A++G + + F+EM+ +G RP S T ++VL C
Sbjct: 360 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 419
Query: 469 GRNGMIHKGRHLFDSMLKD-YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
+ KGR + ++++ + +E + + +++M G+ G++ EA + ++ L
Sbjct: 420 AHLAALQKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFEKMAKRDIL- 476
Query: 528 VLQSLLGACRIHG 540
V S+LGA HG
Sbjct: 477 VWNSMLGAYAQHG 489
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 131/265 (49%), Gaps = 4/265 (1%)
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ F+ L+ S V GR +H F VC LI MYA+ S+ ++++V
Sbjct: 3 PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
F+ L +++ +W +I Y Q G A+ F+ + +E P T+ ++LNA + E
Sbjct: 63 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE-- 120
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SLK G H I++ G + D VG+AL++MY K GS+ + F + + +WTA+I+
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A +H + ++ M+ GV P+ IT +V G + +G+ ++ S++ +E
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIY-SLVSSRVME 239
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEEL 516
+ ++M G G L +A L
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRL 264
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+ F ++L +A+++ HG+R H H+ G + + +V L+ MY + GS+ E+
Sbjct: 2 KPDTAFFVALLQRCSSAKNVD--HGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEA 59
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
Q+VF + K FAWT +I + GDY+ + F +M+ + V P +T++++L C
Sbjct: 60 QQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAST 119
Query: 472 GMIHKGRHLFDSMLK 486
+ G + +L+
Sbjct: 120 ESLKDGMEIHGQILQ 134
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 216/674 (32%), Positives = 362/674 (53%), Gaps = 54/674 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N+Y K F A + + + PD+VSW+ ++SG+ ++ ++AL M L+G +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 58 VTYS----------------------------------------TALSFCLDHEGFLFGL 77
T+S T L+ C E +G+
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
++H ++K G DS+ + NAL+ MY++ G A VF E+P D VSWNA+++G
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ A+ L +M + + +SA AC ++LG+Q+H +KM VG
Sbjct: 269 KNDL-ALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVG 327
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVC 252
L+ YSKC + DA VF M ++VI W ++IS +A+SLF M +G+
Sbjct: 328 VGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLE 387
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
N T ++ + + +H + IK+ + + V N L+ Y + ++D+ KV
Sbjct: 388 FNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKV 447
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDI 371
F+ +++++ ++I+ Y+Q GL A++ + + ++ KP+A+ F S+ NA A
Sbjct: 448 FEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNA--CANLS 505
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
+ + G++ H H++K GL SD G++L++MY K GSI ++ +FNE + +W+A+I
Sbjct: 506 AYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIG 565
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
LA+HG + F +M G+ P+ IT +SVL+ C G++ + R F M K + I
Sbjct: 566 GLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGIT 625
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
P+ +HY+CMVD+LGRVGRL+EA LV ++P +V +LLGA RIH N+E+G A+
Sbjct: 626 PTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEM 685
Query: 552 LMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGF 611
L+ +EP SG+++L++N+YA G W+ VA +R+ MK+ V+KE G SW ++ D ++ F
Sbjct: 686 LLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELK--DKVYTF 743
Query: 612 SSGDNTHPRSEEIY 625
GD +HPRS+EIY
Sbjct: 744 IVGDRSHPRSKEIY 757
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 217/652 (33%), Positives = 361/652 (55%), Gaps = 19/652 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y G A IF+N++ D V++NT+++G + + A+ RM+L G+ D+
Sbjct: 290 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 349
Query: 58 VTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T ++ + C +G LF G QLH+ K G S + AL+ +Y++ + A F
Sbjct: 350 NTLASLVVAC-SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 408
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E ++ V WN +L Y D + +M + + + ++ S C +LE
Sbjct: 409 ETEVENVVLWNVMLVAYGLLDDLR-NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 467
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
LG+QIH IK + + V +VL+ Y+K A + R ++V+SWTTMI+
Sbjct: 468 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 527
Query: 234 -MNRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N +D A++ F++M G+ ++V + A + +KEG+ IH + F S+
Sbjct: 528 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 587
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
N L+T+Y+R +++S F++ + I+WNAL+SG+ Q+G + A++ F + +E
Sbjct: 588 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 647
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
N +TFGS + A A+E ++K G++ H+ I K G DS+ V +AL+ MY K GSI +
Sbjct: 648 IDNNNFTFGSAVKA--ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISD 705
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+++ F E K+E +W AII+A ++HG ++ F +M + VRP+ +T + VL+ C
Sbjct: 706 AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 765
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ KG F+SM +Y + P P+HY C+VDML R G L A+E + ++P P V +
Sbjct: 766 IGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWR 825
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL AC +H N+E+GE A L+++EP S +YVL+SNLYA W+ + R+ MK KG
Sbjct: 826 TLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKG 885
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL---GSEMKYLN 639
V+KE G SW +V + +H F GD HP ++EI+ + L SE+ Y+
Sbjct: 886 VKKEPGQSWIEVK--NSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQ 935
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 261/525 (49%), Gaps = 15/525 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++Y ++G D A +F+ L D SW ++SG K++ +A+ M ++G++
Sbjct: 189 IDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTP 248
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+S+ LS C E G QLH L++K G S+ YV NAL+++Y G L+ A +F
Sbjct: 249 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 308
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D+V++N +++G +Q G YG +A+ M GL D + S AC + L
Sbjct: 309 MSQRDAVTYNTLINGLSQCG-YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 367
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+Q+H + K+G+ ++ + L++ Y+KC A F NV+ W M+
Sbjct: 368 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 427
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ ++ +F++M+++ + PN T+ ++ I +G+L + G IH IKTNF
Sbjct: 428 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL-ELGEQIHSQIIKTNFQLNAY 486
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VC+ LI MYA+ + + + + ++++SW +I+GY Q A+ F ++
Sbjct: 487 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 546
Query: 352 KPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + NAV A + +LK GQ+ H+ G SD +AL+ +Y + G I E
Sbjct: 547 IRSDEV--GLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 604
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S F +T+ AW A++S + G+ E + F M +G+ ++ TF S +
Sbjct: 605 SYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASE 664
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+ +G+ + + K + + + + ++ M + G + +AE+
Sbjct: 665 TANMKQGKQVHAVITKTGY-DSETEVCNALISMYAKCGSISDAEK 708
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/562 (26%), Positives = 262/562 (46%), Gaps = 23/562 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ Y G A +F+ + I +WN ++ + + +RM V +
Sbjct: 87 FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNE 146
Query: 58 VTYSTALSFCLDHE-GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+S L C F Q+H+ I+ GL V N LI +YSR G + ARRVFD
Sbjct: 147 GTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD 206
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ KD SW A++SG +++ + EAI +M G+ +F+S SAC ++LE
Sbjct: 207 GLRLKDHSSWVAMISGLSKN-ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 265
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MN 235
+G+Q+HG+ +K+G+ + V N L+S Y A +F M R+ +++ T+I+ ++
Sbjct: 266 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 325
Query: 236 R----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E A+ LFK M LDG+ P+ T L+ A S + G+ +H K F S
Sbjct: 326 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 385
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV---- 347
+ L+ +YA+ ++ + F E ++ WN ++ Y GL L ++ F +
Sbjct: 386 IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GL-LDDLRNSFRIFRQM 441
Query: 348 -IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
I+E PN YT+ S+L D+ L G++ HS IIK + V S L+DMY K G
Sbjct: 442 QIEEIVPNQYTYPSILKTCIRLGDLEL--GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 499
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ + + K +WT +I+ ++ + + F++M ++G+R D + + ++
Sbjct: 500 KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVS 559
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C + +G+ + P + +V + R G++EE+ Q G +
Sbjct: 560 ACAGLQALKEGQQIHAQACVSGFSSDLP-FQNALVTLYSRCGKIEESYLAFEQTEAGDNI 618
Query: 527 SVLQSLLGACRIHGNVEMGERI 548
+ +L+ + GN E R+
Sbjct: 619 A-WNALVSGFQQSGNNEEALRV 639
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 227/464 (48%), Gaps = 12/464 (2%)
Query: 67 CLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVS 125
CL G L G +LHS I+K GLDS + L Y G L A +VFDEMP + +
Sbjct: 54 CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFT 113
Query: 126 WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC-GHEKNLELGKQIHGV 184
WN ++ G E + M+ + + + +F+ AC G ++ +QIH
Sbjct: 114 WNKMIKELASRNLIG-EVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHAR 172
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDA 239
+ G V N L+ YS+ A +VF + ++ SW MIS +A
Sbjct: 173 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEA 232
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ LF +M + G+ P F ++ A ++ G +HGL +K F S+ VCN L+++
Sbjct: 233 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 292
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTF 358
Y ++ +E +F +S R+ +++N LI+G +Q G A++ F + + +P++ T
Sbjct: 293 YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 352
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
S++ A A D +L GQ+ H++ K+G S+ + ALL++Y K I + F ET
Sbjct: 353 ASLVVACSA--DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 410
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+ ++ W ++ A D + F++M+ + + P+ T+ S+L C R G + G
Sbjct: 411 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 470
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+ ++K + + + S ++DM ++G+L+ A +++ + G
Sbjct: 471 QIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 513
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 13/283 (4%)
Query: 243 FKEMRLD-----GVCPNDVTFIGLIH-AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
F+E R+D G+ PN T L+ + + EGR +H +K S + L
Sbjct: 27 FQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKL 86
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
Y + + KVFDE+ R I +WN +I A L F ++ E+ PN
Sbjct: 87 FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNE 146
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
TF VL A ++ ++ H+ I+ GL +V + L+D+Y + G + ++RVF
Sbjct: 147 GTFSGVLEACRGG-SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 205
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ + K +W A+IS L+++ + F +M G+ P F SVL+ C + +
Sbjct: 206 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 265
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEEL 516
G L +LK + S D Y C +V + +G L AE +
Sbjct: 266 IGEQLHGLVLK---LGFSSDTYVCNALVSLYFHLGNLISAEHI 305
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 216/646 (33%), Positives = 344/646 (53%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N Y K A +F+ + + + VS+ T++ G+ + +A+ R+ G +
Sbjct: 86 LNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNP 145
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ST L + E G +H+ + K G DS+ +VG ALI YS G AR+VFD
Sbjct: 146 FVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDA 205
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
+ KD VSW +++ Y ++ + E L L MR G + ++ +F S AC +
Sbjct: 206 IEYKDMVSWTGMVACYVENECF--EESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFN 263
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
+GK +HG + K Y + VG L+ Y K DA +VF M +VI W+ MI
Sbjct: 264 VGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYA 323
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
S E+A+ +F MR V PN T L+ A + ++ G IH +K
Sbjct: 324 QSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVF 383
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
V N L+ MYA+ M++S ++F E +SWN +I GY Q G A+ F +++ +
Sbjct: 384 VSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQ 443
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ T+ SVL A +L+ G + HS +K D + +VG+AL+DMY K G+I +
Sbjct: 444 VQGTEVTYSSVLRACAGIA--ALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKD 501
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF+ +E + +W A+IS + HG Y + F+ M +PD +TF+ +L+ C
Sbjct: 502 ARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSN 561
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G+ F SM+++Y IEP +HY+CMV +LGR G L++A +LV +IP P + V +
Sbjct: 562 AGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWR 621
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL AC IH +VE+G A ++++EP ++VL+SN+YA W VA +R MK KG
Sbjct: 622 ALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKG 681
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+RKE G SW + + +H FS GD +HP ++ I M E L + +
Sbjct: 682 IRKEPGLSW--IENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKAR 725
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 241/465 (51%), Gaps = 10/465 (2%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
F+ Y + L C+ + G LH I+K G +++ N L+ Y ++ L +A ++
Sbjct: 42 FNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKL 101
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FDEMP++++VS+ ++ GY+Q + EAI + +G L+ F++ +
Sbjct: 102 FDEMPDRNTVSFVTLIQGYSQCLRFS-EAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEW 160
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
+LG +H K+G+ + VG L+ YS C A +VF + ++++SWT M++
Sbjct: 161 AKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVAC 220
Query: 235 NR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
E+++ LF MR+ G PN+ TF ++ A + G+ +HG KT++L E
Sbjct: 221 YVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEE 280
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V LI +Y + + D+ +VF+E+ ++I W+ +I+ YAQ+ S A++ F + +
Sbjct: 281 LFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRR 340
Query: 350 E-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
PN +T S+L A + D+ L G + H H++KVGLD + V +AL+DMY K G +
Sbjct: 341 GLVLPNQFTLASLLQACASLVDLQL--GNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRM 398
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S ++F+E+ ++ +W +I + G+ E + FK+M V+ +T+ SVL C
Sbjct: 399 ENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRAC 458
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ G + +K + + + + ++DM + G +++A
Sbjct: 459 AGIAALEPGSQIHSLSVKTIY-DKNTVVGNALIDMYAKCGNIKDA 502
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 217/652 (33%), Positives = 361/652 (55%), Gaps = 19/652 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y G A IF+N++ D V++NT+++G + + A+ RM+L G+ D+
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 58 VTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T ++ + C +G LF G QLH+ K G S + AL+ +Y++ + A F
Sbjct: 390 NTLASLVVAC-SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E ++ V WN +L Y D + +M + + + ++ S C +LE
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLR-NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
LG+QIH IK + + V +VL+ Y+K A + R ++V+SWTTMI+
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 234 -MNRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N +D A++ F++M G+ ++V + A + +KEG+ IH + F S+
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
N L+T+Y+R +++S F++ + I+WNAL+SG+ Q+G + A++ F + +E
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 687
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
N +TFGS + A A+E ++K G++ H+ I K G DS+ V +AL+ MY K GSI +
Sbjct: 688 IDNNNFTFGSAVKA--ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISD 745
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+++ F E K+E +W AII+A ++HG ++ F +M + VRP+ +T + VL+ C
Sbjct: 746 AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 805
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ KG F+SM +Y + P P+HY C+VDML R G L A+E + ++P P V +
Sbjct: 806 IGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWR 865
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL AC +H N+E+GE A L+++EP S +YVL+SNLYA W+ + R+ MK KG
Sbjct: 866 TLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKG 925
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL---GSEMKYLN 639
V+KE G SW +V + +H F GD HP ++EI+ + L SE+ Y+
Sbjct: 926 VKKEPGQSWIEVK--NSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQ 975
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 261/525 (49%), Gaps = 15/525 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++Y ++G D A +F+ L D SW ++SG K++ +A+ M ++G++
Sbjct: 229 IDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTP 288
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+S+ LS C E G QLH L++K G S+ YV NAL+++Y G L+ A +F
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D+V++N +++G +Q G YG +A+ M GL D + S AC + L
Sbjct: 349 MSQRDAVTYNTLINGLSQCG-YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+Q+H + K+G+ ++ + L++ Y+KC A F NV+ W M+
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ ++ +F++M+++ + PN T+ ++ I +G+L + G IH IKTNF
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL-ELGEQIHSQIIKTNFQLNAY 526
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VC+ LI MYA+ + + + + ++++SW +I+GY Q A+ F ++
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 352 KPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + NAV A + +LK GQ+ H+ G SD +AL+ +Y + G I E
Sbjct: 587 IRSDEV--GLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 644
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S F +T+ AW A++S + G+ E + F M +G+ ++ TF S +
Sbjct: 645 SYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASE 704
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+ +G+ + + K + + + + ++ M + G + +AE+
Sbjct: 705 TANMKQGKQVHAVITKTGY-DSETEVCNALISMYAKCGSISDAEK 748
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/562 (26%), Positives = 262/562 (46%), Gaps = 23/562 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ Y G A +F+ + I +WN ++ + + +RM V +
Sbjct: 127 FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNE 186
Query: 58 VTYSTALSFCLDHE-GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+S L C F Q+H+ I+ GL V N LI +YSR G + ARRVFD
Sbjct: 187 GTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD 246
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ KD SW A++SG +++ + EAI +M G+ +F+S SAC ++LE
Sbjct: 247 GLRLKDHSSWVAMISGLSKN-ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MN 235
+G+Q+HG+ +K+G+ + V N L+S Y A +F M R+ +++ T+I+ ++
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 236 R----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E A+ LFK M LDG+ P+ T L+ A S + G+ +H K F S
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 425
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV---- 347
+ L+ +YA+ ++ + F E ++ WN ++ Y GL L ++ F +
Sbjct: 426 IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GL-LDDLRNSFRIFRQM 481
Query: 348 -IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
I+E PN YT+ S+L D+ L G++ HS IIK + V S L+DMY K G
Sbjct: 482 QIEEIVPNQYTYPSILKTCIRLGDLEL--GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 539
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ + + K +WT +I+ ++ + + F++M ++G+R D + + ++
Sbjct: 540 KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVS 599
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C + +G+ + P + +V + R G++EE+ Q G +
Sbjct: 600 ACAGLQALKEGQQIHAQACVSGFSSDLP-FQNALVTLYSRCGKIEESYLAFEQTEAGDNI 658
Query: 527 SVLQSLLGACRIHGNVEMGERI 548
+ +L+ + GN E R+
Sbjct: 659 A-WNALVSGFQQSGNNEEALRV 679
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 227/464 (48%), Gaps = 12/464 (2%)
Query: 67 CLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVS 125
CL G L G +LHS I+K GLDS + L Y G L A +VFDEMP + +
Sbjct: 94 CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFT 153
Query: 126 WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC-GHEKNLELGKQIHGV 184
WN ++ G E + M+ + + + +F+ AC G ++ +QIH
Sbjct: 154 WNKMIKELASRNLIG-EVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHAR 212
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDA 239
+ G V N L+ YS+ A +VF + ++ SW MIS +A
Sbjct: 213 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEA 272
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ LF +M + G+ P F ++ A ++ G +HGL +K F S+ VCN L+++
Sbjct: 273 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 332
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTF 358
Y ++ +E +F +S R+ +++N LI+G +Q G A++ F + + +P++ T
Sbjct: 333 YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 392
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
S++ A A D +L GQ+ H++ K+G S+ + ALL++Y K I + F ET
Sbjct: 393 ASLVVACSA--DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+ ++ W ++ A D + F++M+ + + P+ T+ S+L C R G + G
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+ ++K + + + S ++DM ++G+L+ A +++ + G
Sbjct: 511 QIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 129/287 (44%), Gaps = 13/287 (4%)
Query: 243 FKEMRLD-----GVCPNDVTFIGLIH-AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
F+E R+D G+ PN T L+ + + EGR +H +K S + L
Sbjct: 67 FQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKL 126
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
Y + + KVFDE+ R I +WN +I A L F ++ E+ PN
Sbjct: 127 FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNE 186
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
TF VL A ++ ++ H+ I+ GL +V + L+D+Y + G + ++RVF
Sbjct: 187 GTFSGVLEACRGG-SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ + K +W A+IS L+++ + F +M G+ P F SVL+ C + +
Sbjct: 246 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQI 520
G L +LK + S D Y C +V + +G L AE + +
Sbjct: 306 IGEQLHGLVLK---LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 216/652 (33%), Positives = 361/652 (55%), Gaps = 22/652 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+N+Y K G A+ +F+ ++V WN +L+G +++ +A+ L M +G+ D
Sbjct: 242 INLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADE 301
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY + L C + G Q+ + +K +D+ ++V NA + M+S++G + +A+ +F+
Sbjct: 302 FTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNL 361
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD+VSWNA+L G T + + EAI L M G+ D VSF + +AC + + E
Sbjct: 362 ITYKDTVSWNALLVGLTHN-EEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATET 420
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQIH +++K ++ +VG+ L+ YSK KV ++ +++ +I+
Sbjct: 421 GKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQ 480
Query: 234 MNRED-AVSLFKEMRLDGVCPNDVTFIGLIHAIS--IGNLVKEGRMIHGLCIKTNFLSE- 289
NRED A+ LF+++ DG+ P+ TF ++ + + +++ G+ +H +K+ FL++
Sbjct: 481 NNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSII--GKQVHCYTLKSGFLNDD 538
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVI 348
SV L+ Y + +D+ K+ E+ + ++ W A++SGYAQNG S ++ +F+ +
Sbjct: 539 TSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMR 598
Query: 349 K-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ P+ TF S+L A +E +L G+ H IIK G S SA++DMY K G
Sbjct: 599 SYDVHPDEVTFASILKA--CSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGD 656
Query: 408 IFESQRVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I S F E + K + W ++I A++G + + F++M++ ++ D +TFL VL
Sbjct: 657 IISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLI 716
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G+I +GRH FDSM K Y I P DHY+C +D+LGR G L+EA+E++ ++P P
Sbjct: 717 ACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDG 776
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
+ + L ACR+H + E GE A L+++EP S +YVL+SN+YA G+W + R+ M
Sbjct: 777 VIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAAAGNWVEAKMAREAM 836
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM-KY 637
+ KG K G SW VG+ L F D H + IY M + L M KY
Sbjct: 837 REKGATKFPGCSWITVGNKTSL--FLVQDKNHLGALRIYEMLDNLTRMMHKY 886
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/540 (28%), Positives = 278/540 (51%), Gaps = 19/540 (3%)
Query: 8 GQFDKALCIFNNLNNPD-IVSWNTVLSGFEKSD----DALSFALRMNLIGVVFDAVTYST 62
G+ + A + + + P V+WN V+SG+ + + M G+ T+++
Sbjct: 146 GRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFAS 205
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
LS + F+ G Q+H+ V+ GLD+ V+VG++LI +Y++ G + +A VFD K+
Sbjct: 206 MLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKN 265
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
V WNA+L+G ++ +Y VEAI + M R GL D ++ S AC H + LG+Q+
Sbjct: 266 VVMWNAMLNGLVRN-EYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQ 324
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM---ISMNRED- 238
V+IK + V N + +SK DA +F + ++ +SW + ++ N ED
Sbjct: 325 CVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDE 384
Query: 239 -AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
A+ + K M LDGV P++V+F +I+A S + G+ IH L +K + S +V + LI
Sbjct: 385 EAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLI 444
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
Y++ ++ KV ++ I+ N LI+G QN A+ F V+++ KP+++
Sbjct: 445 DFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSF 504
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVF 415
TF S+L+ G +S G++ H + +K G L+ D VG +L+ Y K ++ ++
Sbjct: 505 TFSSILS--GCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLL 562
Query: 416 NETQE-KSEFAWTAIISALARHG-DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
E + K+ WTAI+S A++G Y+S+++ F M + V PD +TF S+L C
Sbjct: 563 IEMPDHKNLVEWTAIVSGYAQNGYSYQSLLS-FWRMRSYDVHPDEVTFASILKACSEMTA 621
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ G+ + ++K S ++DM + G + + E ++ +++ S++
Sbjct: 622 LSDGKEIHGLIIKS-GFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMI 680
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 234/480 (48%), Gaps = 51/480 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY + G+ A +F ++ PD V W +++SG+ ++ +A+ RM +G D
Sbjct: 73 VNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDR 132
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT C+ A++ + GRL +AR +
Sbjct: 133 VT-------CV----------------------------AVVCALTALGRLEDARTLLHR 157
Query: 118 MPNKDS-VSWNAILSGYTQDGDYGVE-AILALIEMMRK-GLRLDHVSFTSAASACGHEKN 174
MP S V+WNA++SGY Q G+E + L + MR GL +F S SA +
Sbjct: 158 MPAPSSTVAWNAVISGYAQQS--GIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATA 215
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
G+Q+H +++ G +V VG+ L++ Y+KC GDA VF ++NV+ W M+
Sbjct: 216 FIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNG 275
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + +A+ +F M+ G+ ++ T++ ++ A + + GR + + IK +
Sbjct: 276 LVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDAS 335
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-I 348
V N + M+++F ++ D++ +F+ ++ ++ +SWNAL+ G N A+ G+ +
Sbjct: 336 LFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNL 395
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
P+ +F +V+NA + + G++ H +K + S+ VGS+L+D Y K G +
Sbjct: 396 DGVTPDEVSFATVINACSNIR--ATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDV 453
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++V + S +I+ L ++ + ++ F+++ G++P S TF S+L+ C
Sbjct: 454 ESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGC 513
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 216/471 (45%), Gaps = 35/471 (7%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
GV D + LS C + G Q H K GL S + AL+ MY+R GR+ +A
Sbjct: 26 GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
RRVF + D+V W +++SGY + G + EA+ M + G D V+ + A
Sbjct: 86 RRVFGGISLPDTVCWASMISGYHRAGRFQ-EAVCLFTRMEKMGSSPDRVTCVAVVCALTA 144
Query: 172 EKNLELGKQ-IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
LE + +H +M + N ++S Y+ + +G ++VF
Sbjct: 145 LGRLEDARTLLH----RMPAPSSTVAWNAVISGYA--QQSGIEHEVF------------- 185
Query: 231 MISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
L+K+MR G+ P TF ++ A + EGR +H ++ +
Sbjct: 186 ----------GLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANV 235
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + LI +YA+ + D+ VFD + ++ WNA+++G +N + A+Q F + +
Sbjct: 236 FVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRL 295
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ + +T+ SVL A + L G++ IK +D+ V +A LDM+ K G+I
Sbjct: 296 GLEADEFTYVSVLGACAHLDSHCL--GRQVQCVTIKNCMDASLFVANATLDMHSKFGAID 353
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++ +FN K +W A++ L + + E ++ K M GV PD ++F +V+ C
Sbjct: 354 DAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACS 413
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
G+ + +K + I + S ++D + G +E +++ Q+
Sbjct: 414 NIRATETGKQIHCLAMK-HSICSNHAVGSSLIDFYSKHGDVESCRKVLAQV 463
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 213/647 (32%), Positives = 354/647 (54%), Gaps = 17/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+N+Y K G A +F+ +IV WN +L GF E ++ + M + D
Sbjct: 366 INLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADD 425
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L C++ G Q+H + +K G+D++++V NA++ MYS+ G + A+ +F
Sbjct: 426 FTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSL 485
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P KDSVSWNA++ G + + G EAI L M G+ LD VSF +A +AC + +E
Sbjct: 486 IPVKDSVSWNALIVGLAHNEEEG-EAINMLKRMKFYGIALDEVSFATAINACSNIWAIET 544
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW----TTMIS 233
GKQIH SIK ++ +VG+ L+ YSK + KV + +++ T ++
Sbjct: 545 GKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQ 604
Query: 234 MNRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE-PS 291
NRED A+ LF+++ DG P++ TF ++ + G+ +H +K+ L++ S
Sbjct: 605 NNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTS 664
Query: 292 VCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIK- 349
+ L+ +Y + + ++D+ K+ +E+ + ++ W A ISGYAQNG S+ ++ F+ +
Sbjct: 665 LGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSY 724
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ + + TF SVL A +E +L G+ H I+K G S SAL+DMY K G +
Sbjct: 725 DVRSDEATFTSVLKA--CSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVI 782
Query: 410 ESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S +F E + + W ++I A++G + F++M+ ++PD +T L VL C
Sbjct: 783 SSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIAC 842
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G+I +G H FDSM + Y I P DHY+C++D+LGR G L++A+E++ Q+P +
Sbjct: 843 SHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVI 902
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+ L AC++H + E G+ A L++MEP S +YV +S+L+A G+W + R+ M+
Sbjct: 903 WATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMRE 962
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
KGV K G SW VG+ + F D HP + IY+M + L M
Sbjct: 963 KGVMKFPGCSWITVGNKQSV--FVVQDTHHPDALSIYKMLDDLTGMM 1007
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/524 (29%), Positives = 269/524 (51%), Gaps = 15/524 (2%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD-DALSFALR--MNLIGVVFDAVTYSTAL 64
G+ A + + V+WN V++ + +S D+ F L M G++ T+++ L
Sbjct: 272 GRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASIL 331
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
S + F G Q+H+ VK GLD+ V+VG++LI +Y + G + +A++VFD K+ V
Sbjct: 332 SAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIV 391
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
WNAIL G+ Q+ + E I M R L D +F S AC + +L+LG+Q+H +
Sbjct: 392 MWNAILYGFVQN-ELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCI 450
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMNRE--DA 239
+IK G + V N ++ YSK A +F + ++ +SW +I + N E +A
Sbjct: 451 TIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEA 510
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+++ K M+ G+ ++V+F I+A S ++ G+ IH IK N S +V + LI +
Sbjct: 511 INMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDL 570
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
Y++F ++ S KV + I+ NALI+G QN A++ F V+K+ KP+ +TF
Sbjct: 571 YSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTF 630
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
S+L+ G +S G++ H + +K L+ D +G +L+ +Y K + ++ ++ E
Sbjct: 631 TSILS--GCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEE 688
Query: 418 TQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
+ K+ WTA IS A++G + F M + VR D TF SVL C +
Sbjct: 689 VPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTD 748
Query: 477 GRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
G+ + ++K + S ++DM + G + + E+ ++
Sbjct: 749 GKEIHGLIVKSGFVS-YETATSALMDMYSKCGDVISSFEIFKEL 791
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 228/477 (47%), Gaps = 47/477 (9%)
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
IG D + LS C G Q+H ++K G S V+ L+ MY++ G + +
Sbjct: 151 IGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDD 210
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
ARR+FD + D++ W ++++GY + G Y + LAL M
Sbjct: 211 ARRMFDGIACPDTICWTSMIAGYHRVGRY--QQALALFSRM------------------- 249
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
EK + Q+ V+I +ST + GDA + +R+ + ++W
Sbjct: 250 -EKMGSVPDQVTCVTI--------------ISTLASMGRLGDARTLLKRIRMTSTVAWNA 294
Query: 231 MISMNREDAVS-----LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I+ + + L+K+M+ G+ P TF ++ A + EGR IH +K
Sbjct: 295 VIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHG 354
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF- 344
+ V + LI +Y + + D++KVFD + + I+ WNA++ G+ QN L +Q F
Sbjct: 355 LDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQ 414
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + + + +TF SVL GA ++ SL G++ H IK G+D+D V +A+LDMY
Sbjct: 415 YMRRADLEADDFTFVSVL---GACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYS 471
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G+I ++ +F+ K +W A+I LA + + +N K M+ G+ D ++F +
Sbjct: 472 KLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFAT 531
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ C I G+ + + +K Y++ + S ++D+ + G +E + +++ +
Sbjct: 532 AINACSNIWAIETGKQIHSASIK-YNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHV 587
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 219/484 (45%), Gaps = 61/484 (12%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA--ILSGYTQD 136
LH+ I++ GL +G+AL+ +Y R GR+ A R + S A +LS + +
Sbjct: 75 LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134
Query: 137 GDYGVEAILALIEMMR--KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
G +L + +R G D SAC LE G+Q+H +K G+ + V
Sbjct: 135 G--SPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSV 192
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----MNR-EDAVSLFKEMRLD 249
L+ Y+KC DA ++F + + I WT+MI+ + R + A++LF M
Sbjct: 193 FCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKM 252
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
G P+ VT C +I+ A + D+
Sbjct: 253 GSVPDQVT-----------------------------------CVTIISTLASMGRLGDA 277
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-----PNAYTFGSVLNA 364
+ + ++WNA+I+ Y+Q+GL FG+ K+ K P TF S+L+A
Sbjct: 278 RTLLKRIRMTSTVAWNAVIASYSQSGLD----SEVFGLYKDMKKQGLMPTRSTFASILSA 333
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
AA + G++ H+ +K GLD++ VGS+L+++Y K G I ++++VF+ + EK+
Sbjct: 334 --AANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIV 391
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W AI+ ++ E + F+ M + D TF+SVL C + GR +
Sbjct: 392 MWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCIT 451
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+K+ ++ + M+DM ++G ++ A+ L IP +S ++G + N E
Sbjct: 452 IKN-GMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVG---LAHNEEE 507
Query: 545 GERI 548
GE I
Sbjct: 508 GEAI 511
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 229/713 (32%), Positives = 370/713 (51%), Gaps = 73/713 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPD--IVSWNTVLS-----GFEKSDDALSFALRMNLIGV 53
++MY KAL + L+ + WN ++ GF +D L RM +G
Sbjct: 65 ISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGF--LEDVLQLYRRMQRLGW 122
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
D T+ L C + F G +H+++ G + V+VGN L++MY R G AR+
Sbjct: 123 RPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQ 182
Query: 114 VFDEMPNK---DSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASA 168
VFDEM + D VSWN+I++ Y Q GD + A + + E M + G+R D VS + A
Sbjct: 183 VFDEMRERGVGDLVSWNSIVAAYMQGGD-SIRA-MKMFERMTEDLGIRPDAVSLVNVLPA 240
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C GKQ+HG +++ G V VGN ++ Y+KC + +ANKVF RM ++V+SW
Sbjct: 241 CASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSW 300
Query: 229 TTMIS----MNRED------------------------------------AVSLFKEMRL 248
M++ + R D A+ +F++MRL
Sbjct: 301 NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRL 360
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF---LSEPS----VCNCLITMYA 301
G PN VT + L+ ++ + G+ H IK ++P V N LI MY+
Sbjct: 361 CGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYS 420
Query: 302 RFESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKESK---PNAY 356
+ +S + + +FD + R +++W LI G AQ+G + A++ F +++ PNA+
Sbjct: 421 KCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAF 480
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVF 415
T L A A +L+ G++ H+++++ +S + V + L+DMY K G + ++ VF
Sbjct: 481 TISCALMA--CARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVF 538
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ +++ +WT++++ HG E + F EM+ G+ PD +TF+ VL C +GM+
Sbjct: 539 DNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVD 598
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
+G + F+ M KD+ + P +HY+CMVD+L R GRL+EA EL+ +P P +V +LL A
Sbjct: 599 QGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 658
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
CR++ NVE+GE A+ L+++E GSY L+SN+YA W+ VA +R MK+ G++K
Sbjct: 659 CRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRP 718
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
G SW V G F +GD +HP S++IY + L +K L + AL
Sbjct: 719 GCSW--VQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFAL 769
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 151/297 (50%), Gaps = 14/297 (4%)
Query: 200 LMSTYSKCEVTGDANKVFRRMH--DRNVISWTTMISMN-----REDAVSLFKEMRLDGVC 252
++S Y A V RR+H V W +I + ED + L++ M+ G
Sbjct: 64 IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 123
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ TF ++ A + G +H + + F V N L++MY R + +++ +V
Sbjct: 124 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQV 183
Query: 313 FDELSCR---EIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGA 367
FDE+ R +++SWN++++ Y Q G S+ A++ F + ++ +P+A + +VL A +
Sbjct: 184 FDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACAS 243
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
S G++ H + ++ GL D VG+A++DMY K G + E+ +VF + K +W
Sbjct: 244 VGAWS--RGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 301
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
A+++ ++ G ++ + F+++ + + + +T+ +V+ + G+ + +F M
Sbjct: 302 AMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQM 358
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 115/230 (50%), Gaps = 14/230 (6%)
Query: 296 LITMYARFESMQDSEKVFDEL--SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
+I+MY F S + V L S + WN LI G +Q + + + +
Sbjct: 64 IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 123
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ YTF VL A G E S + G H+ + G + + VG+ L+ MYG+ G+ ++
Sbjct: 124 PDHYTFPFVLKACG--EIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 181
Query: 413 RVFNETQEKSE---FAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVC 468
+VF+E +E+ +W +I++A + GD M F+ M E+ G+RPD+++ ++VL C
Sbjct: 182 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 241
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEEL 516
G +G+ + L+ E D + + +VDM + G +EEA ++
Sbjct: 242 ASVGAWSRGKQVHGYALRSGLFE---DVFVGNAVVDMYAKCGMMEEANKV 288
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 207/632 (32%), Positives = 350/632 (55%), Gaps = 41/632 (6%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVT 59
MY K +F + +F+ + ++VSWN + S + + D +A+ M L G+ + +
Sbjct: 201 MYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFS 260
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
S+ ++ C G +H ++K G D + + NAL+ MY++ G L +A VF+++
Sbjct: 261 LSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIK 320
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
D VSWNA+++G + E L L+ M++
Sbjct: 321 QPDIVSWNAVIAGCVLHEHH--EQALELLGQMKR-------------------------- 352
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
Q+H +KM + + V L+ YSKC++ DA F + ++++I+W +IS +
Sbjct: 353 QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYW 412
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+SLF EM +G+ N T ++ + + +V R +HGL +K+ F S+ V N
Sbjct: 413 EDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVN 472
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKP 353
LI Y + ++D+E++F+E + +++S+ ++I+ YAQ G A++ F + E KP
Sbjct: 473 SLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKP 532
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ + S+LNA A + + G++ H HI+K G D G++L++MY K GSI ++ R
Sbjct: 533 DRFVCSSLLNA--CANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGR 590
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
F+E E+ +W+A+I LA+HG + F +M +GV P+ IT +SVL C G+
Sbjct: 591 AFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGL 650
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ + + F+SM + + +P +HY+CM+D+LGR G++ EA ELV ++P SV +LL
Sbjct: 651 VTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALL 710
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
GA RIH +VE+G R A+ L +EP SG++VL++N+YA G WE VA +R+ M+ V+K
Sbjct: 711 GAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKK 770
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
E G SW +V D ++ F GD +H RS+EIY
Sbjct: 771 EPGMSWIEVK--DKVYTFLVGDRSHYRSQEIY 800
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/563 (26%), Positives = 282/563 (50%), Gaps = 41/563 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+N+Y K F A + + + PD+VSW+ ++SG+ ++ AL M+L+GV +
Sbjct: 98 INLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNE 157
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+S+ L C + G Q+H ++V G + +V+V N L+ MY++ ++++R+FDE
Sbjct: 158 FTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDE 217
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P ++ VSWNA+ S Y Q D+ EA+ EM+ G++ + S +S +AC ++
Sbjct: 218 IPERNVVSWNALFSCYVQ-XDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK IHG IK+GY N L+ Y+K DA VF ++ +++SW +I+
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E A+ L +M+ R +H +K + S+ V
Sbjct: 337 HEHHEQALELLGQMK---------------------------RQLHSSLMKMDMESDLFV 369
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
L+ MY++ + ++D+ F+ L +++I+WNA+ISGY+Q + A+ F + KE
Sbjct: 370 SVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGI 429
Query: 353 P-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
N T ++L + + + + ++ H +K G SD V ++L+D YGK + ++
Sbjct: 430 GFNQTTLSTILKSTAGLQVVHV--CRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDA 487
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+R+F E ++T++I+A A++G E + F EM++ ++PD S+L C
Sbjct: 488 ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANL 547
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
+G+ L +LK Y + +V+M + G +++A ++ G+ +
Sbjct: 548 SAFEQGKQLHVHILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWSA 605
Query: 532 LLGACRIHGNVEMGERIADALMK 554
++G HG+ ++ + ++K
Sbjct: 606 MIGGLAQHGHGRQALQLFNQMLK 628
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 151/508 (29%), Positives = 258/508 (50%), Gaps = 42/508 (8%)
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+V+YS LS C + GLQ+H+ I K GL + + N LI +YS+ AR++ D
Sbjct: 56 SVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVD 115
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E D VSW+A++SGY Q+G G A++A EM G++ + +F+S AC K+L
Sbjct: 116 ESSEPDLVSWSALISGYAQNG-LGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLR 174
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
+GKQ+HGV + G+ V V N L+ Y+KC+ D+ ++F + +RNV+SW + S
Sbjct: 175 IGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYV 234
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +AV LF EM L G+ PN+ + +++A + G++IHG IK + +P
Sbjct: 235 QXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPF 294
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
N L+ MYA+ + D+ VF+++ +I+SWNA+I+G V+ E
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAG---------------CVLHEH 339
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
A L +G + ++ HS ++K+ ++SD V L+DMY K + ++
Sbjct: 340 HEQA------LELLGQMK-------RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDA 386
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ FN EK AW AIIS +++ + ++ F EM +G+ + T ++L
Sbjct: 387 RMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGL 446
Query: 472 GMIHKGRHLFDSMLKD-YHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
++H R + +K +H D Y + ++D G+ +E+AE + + G +S
Sbjct: 447 QVVHVCRQVHGLSVKSGFH----SDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVS- 501
Query: 529 LQSLLGACRIHGNVEMGERIADALMKME 556
S++ A +G E ++ + ME
Sbjct: 502 FTSMITAYAQYGQGEEALKLFLEMQDME 529
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 176/341 (51%), Gaps = 12/341 (3%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P K + + +++D AIL LI+ + VS++ S C K+L
Sbjct: 19 LPFKPAPKLIQTVPQFSEDPQ--TTAILNLID--KGNFTPTSVSYSKLLSQCCTTKSLRP 74
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G QIH K G S+ N L++ YSKC G A K+ + +++SW+ +IS +
Sbjct: 75 GLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQ 134
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+ F EM L GV N+ TF ++ A SI ++ G+ +HG+ + + F + V
Sbjct: 135 NGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKES 351
N L+ MYA+ + DS+++FDE+ R ++SWNAL S Y Q AV F+ V+
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGI 254
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN ++ S++NA D S G+ H ++IK+G D DP +AL+DMY K G + ++
Sbjct: 255 KPNEFSLSSMVNACTGLRDSS--RGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADA 312
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
VF + ++ +W A+I+ H +E + +M+ +
Sbjct: 313 ISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQ 353
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 216/652 (33%), Positives = 369/652 (56%), Gaps = 24/652 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMN-LIGVVFDA-- 57
+ KSG A +FN + + V+ N ++ G + ++A + MN +I V ++
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 58 VTYSTALSFCLDHE-GFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVF 115
+ S+ + L E G G ++H ++ GL D V +GN L+ MY++ G + +ARRVF
Sbjct: 313 ILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF 372
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M +KDSVSWN++++G Q+G + +EA+ M R + + S+ S+C K
Sbjct: 373 YFMTDKDSVSWNSMITGLDQNGCF-IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SM 234
+LG+QIHG S+K+G +VSV N LM+ Y++ + K+F M + + +SW ++I ++
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Query: 235 NRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
R + AV F + G N +TF ++ A+S + + G+ IHGL +K N E
Sbjct: 492 ARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADE 551
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQ-AFFGV 347
+ N LI Y + M EK+F ++ R+ ++WN++ISGY N L A+ +F +
Sbjct: 552 ATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFML 611
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ +++ + +VL+A + +L+ G H+ ++ L+SD +VGSAL+DMY K G
Sbjct: 612 QTGQRLDSFMYATVLSAFASVA--TLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLSVLT 466
+ + R FN ++ ++W ++IS ARHG E + F+ M+ G PD +TF+ VL+
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G++ +G F+SM Y + P +H+SCM D+LGR G L++ E+ + ++P P +
Sbjct: 730 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNV 789
Query: 527 SVLQSLLGA-CRIHG-NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ +++LGA CR +G E+G++ A+ L ++EP + +YVL+ N+YA G WE + RK
Sbjct: 790 LIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARK 849
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
MK V+KE G+SW + DG+H F +GD +HP ++ IY+ + L +M+
Sbjct: 850 KMKDADVKKEAGYSWVTMK--DGVHMFVAGDKSHPDADVIYKKLKELNRKMR 899
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 250/498 (50%), Gaps = 28/498 (5%)
Query: 58 VTYSTALSF---CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+T LSF C+ H G HS + K LD +VY+ N LI Y G V AR+V
Sbjct: 1 MTNCVPLSFVQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKV 58
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH--E 172
FDEMP ++ VSW I+SGY+++G++ EA++ L +M+++G+ + +F S AC
Sbjct: 59 FDEMPLRNCVSWACIVSGYSRNGEHK-EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGS 117
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC-EVTGDANKVFRRMHDRNVISWTTM 231
+ G+QIHG+ K+ Y V NVL+S Y KC G A F + +N +SW ++
Sbjct: 118 VGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSI 177
Query: 232 ISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLI-HAISIGNL-VKEGRMIHGLCIKT 284
IS+ ++ A +F M+ DG P + TF L+ A S+ V+ I K+
Sbjct: 178 ISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKS 237
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
L++ V + L++ +A+ S+ + KVF+++ R ++ N L+ G + A + F
Sbjct: 238 GLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Query: 345 FGV--IKESKPNAYT-FGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-DSDPIVGSALLD 400
+ + + P +Y S AE++ LK G+ H H+I GL D +G+ L++
Sbjct: 298 MDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVN 357
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K GSI +++RVF +K +W ++I+ L ++G + + ++K M + P S T
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLK---DYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
+S L+ C G+ + LK D ++ S + ++ + G L E ++
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVS----NALMTLYAETGYLNECRKIF 473
Query: 518 GQIPGGPGLSVLQSLLGA 535
+P +S S++GA
Sbjct: 474 SSMPEHDQVS-WNSIIGA 490
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 152/540 (28%), Positives = 266/540 (49%), Gaps = 24/540 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N Y ++G A +F+ + + VSW ++SG+ ++ +AL F M G+ +
Sbjct: 43 INAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQ 102
Query: 58 VTYSTALSFC--LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW-GRLVEARRV 114
+ + L C + G LFG Q+H L+ K + V N LI+MY + G + A
Sbjct: 103 YAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCA 162
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS-AASACG-HE 172
F ++ K+SVSWN+I+S Y+Q GD A M G R +F S +AC E
Sbjct: 163 FGDIEVKNSVSWNSIISVYSQAGDQR-SAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTE 221
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT-TM 231
++ L +QI K G T + VG+ L+S ++K A KVF +M RN ++ M
Sbjct: 222 PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLM 281
Query: 232 ISMNR----EDAVSLFKEMR-LDGVCPND-VTFIGLIHAISIGNLV--KEGRMIHGLCIK 283
+ + R E+A LF +M + V P V + S+ V K+GR +HG I
Sbjct: 282 VGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVIT 341
Query: 284 TNFLS-EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
T + + N L+ MYA+ S+ D+ +VF ++ ++ +SWN++I+G QNG + AV+
Sbjct: 342 TGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVE 401
Query: 343 AFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
+ + + P ++T S L++ + + L GQ+ H +K+G+D + V +AL+ +
Sbjct: 402 RYKSMRRHDILPGSFTLISSLSSCASLKWAKL--GQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALAR-HGDYESVMNQFKEMENKGVRPDSIT 460
Y + G + E +++F+ E + +W +II ALAR + F + G + + IT
Sbjct: 460 YAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRIT 519
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
F SVL+ G+ + LK+ +I + ++ G+ G ++ E++ ++
Sbjct: 520 FSSVLSAVSSLSFGELGKQIHGLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRM 578
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 194/379 (51%), Gaps = 11/379 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K G A +F + + D VSWN++++G +++ +A+ M ++ +
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGS 415
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++LS C + G Q+H +K G+D V V NAL+T+Y+ G L E R++F
Sbjct: 416 FTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSS 475
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D VSWN+I+ + EA++ + R G +L+ ++F+S SA EL
Sbjct: 476 MPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL 535
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS--M 234
GKQIHG+++K + N L++ Y KC K+F RM + R+ ++W +MIS +
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Query: 235 NRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E A+ L M G + + ++ A + ++ G +H ++ S+
Sbjct: 596 HNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVV 655
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVIK 349
V + L+ MY++ + + + F+ + R SWN++ISGYA++G A++ F +
Sbjct: 656 VGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDG 715
Query: 350 ESKPNAYTFGSVLNAVGAA 368
++ P+ TF VL+A A
Sbjct: 716 QTPPDHVTFVGVLSACSHA 734
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 146/549 (26%), Positives = 261/549 (47%), Gaps = 41/549 (7%)
Query: 1 MNMYCKS-GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVT 59
++MY K G ALC F ++ + VSWN+++S + ++ D S A R +F ++
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRS-AFR------IFSSMQ 198
Query: 60 Y-----------STALSFC-LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
Y S + C L Q+ I K GL ++++VG+ L++ +++ G
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEA------ILALIEMMRKGLRLDHVS 161
L AR+VF++M +++V+ N ++ G + +G EA + ++I++ + + S
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQ-KWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
F + A E L+ G+++HG I G V +GN L++ Y+KC DA +VF M
Sbjct: 318 FPEYSLA--EEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375
Query: 221 HDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
D++ +SW +MI+ + +AV +K MR + P T I + + + K G+
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
IHG +K SV N L+T+YA + + K+F + + +SWN++I A++
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE 495
Query: 336 LSLA-AVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
SL AV F + K N TF SVL+AV + L G++ H +K + +
Sbjct: 496 RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEAT 553
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENK 452
+AL+ YGK G + +++F+ E+ + W ++IS + ++ M
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
G R DS + +VL+ + +G + ++ +E S +VDM + GRL+
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC-LESDVVVGSALVDMYSKCGRLDY 672
Query: 513 AEELVGQIP 521
A +P
Sbjct: 673 ALRFFNTMP 681
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 211/641 (32%), Positives = 351/641 (54%), Gaps = 28/641 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLN-NPDIVSWNTVLSGFEKSDDALSFALRMN------LIGV 53
++MY K G F A +F + D++SWNT+L S+D SF +N L G+
Sbjct: 377 ISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGA---SEDRKSFGKVVNTFHHMLLAGI 433
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD-SEVYVGNALITMYSRWGRLVEAR 112
+ V++ L+ C + E FG ++HSLI+ D E V L++MY + G + EA
Sbjct: 434 DPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAE 493
Query: 113 RVFDEMP--NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
VF EMP ++ V+WN +L Y Q+ D EA AL+EM++ G+ D +SFTS S+C
Sbjct: 494 LVFKEMPLPSRSLVTWNVMLGAYAQN-DRSKEAFGALMEMLQGGVLPDALSFTSVLSSCY 552
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ ++ + ++ GY + + L+S + +C A VF M +V+SWT
Sbjct: 553 CSQEAQV---LRMCILESGYRS-ACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTA 608
Query: 231 MISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
M+S E + +LF+ M+L+GV P+ T + + G++IH +
Sbjct: 609 MVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIG 668
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
++ +V N L+ MY+ +++ F+ + R+++SWN + + YAQ GL+ AV F
Sbjct: 669 LEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFR 728
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ E KP+ TF + LN G + +S G+ H+ + GLDSD V + L+ +Y K
Sbjct: 729 QMQLEGVKPDKLTFSTTLNVSGGSALVS--DGKLFHALAAESGLDSDVSVATGLVKLYAK 786
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + E+ +F + + AII ALA+HG E + F +M+ +GVRPD T +S+
Sbjct: 787 CGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSI 846
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
++ CG GM+ +G F +M + + I P+ +HY+C VD+LGR G+LE AE+++ ++P
Sbjct: 847 ISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFED 906
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
V SLLG C++ G+ E+GER A +++++P S ++V++SN+Y G W+ + RK
Sbjct: 907 NTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRK 966
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
M + V+ G SW ++G +H F +GD +HP+++EIY
Sbjct: 967 KMLDENVKNAPGMSWFEIG--KQVHEFVAGDRSHPKTDEIY 1005
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 155/531 (29%), Positives = 263/531 (49%), Gaps = 29/531 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVFD 56
+NMY K G + A+ +F + D+VSW + + + DAL M L + +
Sbjct: 173 INMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPN 232
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T+ TAL C G LHSL+ + L + NALI MY + G A VF
Sbjct: 233 VITFITALGACTSLRD---GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFK 289
Query: 117 EMPNK---DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
M ++ D VSWNA++S + G +G +A+ + +G+R + V+ + +A
Sbjct: 290 AMASRQELDLVSWNAMISASVEAGRHG-DAMAIFRRLRLEGMRPNSVTLITILNALAASG 348
Query: 174 -NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTM 231
+ + HG + GY V +GN ++S Y+KC A VFRR+ + +VISW TM
Sbjct: 349 VDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTM 408
Query: 232 ISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI-KTN 285
+ + + V+ F M L G+ PN V+FI +++A S + GR IH L + +
Sbjct: 409 LGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRR 468
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDE--LSCREIISWNALISGYAQNGLSLAAVQA 343
E SV L++MY + S+ ++E VF E L R +++WN ++ YAQN S A A
Sbjct: 469 DYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGA 528
Query: 344 FFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
+++ P+A +F SVL++ +++ Q I++ G S + +AL+ M+
Sbjct: 529 LMEMLQGGVLPDALSFTSVLSSCYCSQE-----AQVLRMCILESGYRS-ACLETALISMH 582
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
G+ + +++ VFNE +WTA++SA A + D++ V N F+ M+ +GV PD T
Sbjct: 583 GRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLA 642
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ L C + + G+ + + + + +E + +++M G EA
Sbjct: 643 TTLDTCLASTTLGLGK-VIHACVTEIGLEADIAVENALLNMYSNCGDWREA 692
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/573 (27%), Positives = 276/573 (48%), Gaps = 38/573 (6%)
Query: 41 ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALIT 100
+LS A+R++ D Y+ L C+D G H LI GL+ +++GN LI
Sbjct: 12 SLSGAVRVDRAA---DLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLIN 68
Query: 101 MYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
MY R G L EA +F +M ++ VSW A++S Q G + L ++ +
Sbjct: 69 MYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSY 128
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGY----GTHVSVGNVLMSTYSKCEVTGDANKV 216
+ + +AC + ++L +G+ IH + ++G T VGN +++ Y+KC DA V
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAV 188
Query: 217 FRRMHDRNVISWTTMISMNRE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
F + +++V+SWT M + DA+ +F+EM L + PN +TFI + A +
Sbjct: 189 FLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS--- 245
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE---IISWNAL 327
+++G +H L + + +P N LI MY + + + VF ++ R+ ++SWNA+
Sbjct: 246 LRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAM 305
Query: 328 ISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
IS + G A+ F + E +PN+ T ++LNA+ AA + + H I +
Sbjct: 306 ISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNAL-AASGVDFGAARGFHGRIWES 364
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQ 445
G D ++G+A++ MY K G + VF + K + +W ++ A + V+N
Sbjct: 365 GYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNT 424
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML---KDYHIEPSPDHYSCMVD 502
F M G+ P+ ++F+++L C + + GR + +L +DY +E S + +V
Sbjct: 425 FHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY-VESSV--ATMLVS 481
Query: 503 MLGRVGRLEEAEELVGQIP-GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG-- 559
M G+ G + EAE + ++P L +LGA + + + ALM+M G
Sbjct: 482 MYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA---YAQNDRSKEAFGALMEMLQGGVL 538
Query: 560 ----SGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
S + VL S +++ + IL G +S
Sbjct: 539 PDALSFTSVLSSCYCSQEAQVLRMCILESGYRS 571
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 155/551 (28%), Positives = 275/551 (49%), Gaps = 36/551 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD-ALSFALRMNLI---GVVFD 56
+NMY + G ++A IF+ + ++VSW ++S + A +FAL ++ +
Sbjct: 67 INMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPN 126
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD----SEVYVGNALITMYSRWGRLVEAR 112
+ T L+ C + G +H++I + GL+ + VGNA+I MY++ G L +A
Sbjct: 127 SYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAI 186
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
VF +P KD VSW A+ Y Q+ + +A+ EM+ + L + ++F +A AC
Sbjct: 187 AVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC--- 243
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR---NVISWT 229
+L G +H + + G N L++ Y KC A VF+ M R +++SW
Sbjct: 244 TSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWN 303
Query: 230 TMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL-VKEGRMIHGLCIK 283
MIS + E DA+++F+ +RL+G+ PN VT I +++A++ + R HG +
Sbjct: 304 AMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWE 363
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQ 342
+ +L + + N +I+MYA+ + VF + + ++ISWN ++ G +++ S V
Sbjct: 364 SGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTML-GASEDRKSFGKVV 422
Query: 343 AFFG--VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD-SDPIVGSALL 399
F ++ PN +F ++LNA +E +L G++ HS I+ D + V + L+
Sbjct: 423 NTFHHMLLAGIDPNKVSFIAILNACSNSE--ALDFGRKIHSLILTRRRDYVESSVATMLV 480
Query: 400 DMYGKRGSIFESQRVFNET--QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
MYGK GSI E++ VF E +S W ++ A A++ + EM GV PD
Sbjct: 481 SMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPD 540
Query: 458 SITFLSVLTVCGRNGMIHKGRH-LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+++F SVL+ C + R + +S + +E + ++ M GR LE+A +
Sbjct: 541 ALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETA------LISMHGRCRELEQARSV 594
Query: 517 VGQIPGGPGLS 527
++ G +S
Sbjct: 595 FNEMDHGDVVS 605
>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
Length = 917
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 342/579 (59%), Gaps = 19/579 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M MY G+ D A F+ + D +SWNT++SG ++ D+A+ RM G+ D
Sbjct: 348 MTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDK 407
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + + + L L+V+ G++ +V++ +ALI M+SR+G + EAR +FD+
Sbjct: 408 FTFISIIDGTARMQEAKI---LSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDD 464
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M ++D V W +I+S Y Q G + L +MR +GL + + +A +AC L
Sbjct: 465 MKDRDIVMWTSIISSYVQHGSS--DDALGCTRLMRLEGLMGNDFTLVTALNACASLTALS 522
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--M 234
GK IH +I+ G+ +VGN L++ Y+KC +A++VF + +N++SW T+ + +
Sbjct: 523 EGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQC-GKNLVSWNTIAAAYV 581
Query: 235 NRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
R+ +A+ LF+EM+L+G+ + V+F+ +++ S + EGR IH + ++T S+
Sbjct: 582 QRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSAS---EGRKIHNILLETGMESDHI 638
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+ MY +S+ ++ ++F + R+I+SWNA+I+G A++GLS A+Q F + E
Sbjct: 639 VSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEG 698
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ +F +VLNA + SLK + I G ++D IVG+A++ M+G+ G + E
Sbjct: 699 VAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAE 758
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++R F +E+ +W I++A A+HG+ E + F+ M+ + RPDSIT +SVL+ C
Sbjct: 759 ARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSH 818
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+I +G H F SM +++ I S +HY C+VD+L R GRL++AEEL+ ++P +
Sbjct: 819 GGLIEEGYHHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWM 878
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNL 569
+LL AC++ G+ + +R+ + +M+++P +YV++S++
Sbjct: 879 TLLSACKVQGDEKRAKRVGERVMELDPRRPAAYVVLSSV 917
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/503 (31%), Positives = 279/503 (55%), Gaps = 34/503 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY K G + A +F+ L D+VSW +++ + + D +AL RM GV+ +
Sbjct: 145 IKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNR 204
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+TY+TA+S C E G +HS +++ G +S+V V A++ MY + G L +AR VF+
Sbjct: 205 ITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFER 264
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEM-MRKGLRLDHVSFTSAASACGHEKNLE 176
MP+ ++VSWNAI++ TQ G VEA+ M ++ G+ D V+F + +AC L
Sbjct: 265 MPHPNTVSWNAIVAACTQHG-CCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLT 323
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+ +H ++ GY TH+ VGN +M+ YS C +A F M +R+ ISW T+IS +
Sbjct: 324 FGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHA 383
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +AV LF+ M +G+ P+ TFI +I + ++E +++ L +++ +
Sbjct: 384 QAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTA---RMQEAKILSELMVESGVELDVF 440
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS--------LAAVQA 343
+ + LI M++R+ +++++ +FD++ R+I+ W ++IS Y Q+G S L ++
Sbjct: 441 LVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEG 500
Query: 344 FFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
G N +T + LNA A +L G+ H+H I+ G + P VG+AL++MY
Sbjct: 501 LMG-------NDFTLVTALNA--CASLTALSEGKLIHAHAIERGFAASPAVGNALINMYA 551
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G + E+ RVF++ K+ +W I +A + + + F+EM+ +G++ D ++F++
Sbjct: 552 KCGCLEEADRVFHQCG-KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVT 610
Query: 464 VLTVCGRNGMIHKGRHLFDSMLK 486
VL C +GR + + +L+
Sbjct: 611 VLNGCSSAS---EGRKIHNILLE 630
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 151/529 (28%), Positives = 282/529 (53%), Gaps = 17/529 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + A+ +F +L++P VSWN++L+ F + A RM L G+ D
Sbjct: 44 IHMYGKCGCVEDAVSVFQSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDR 103
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ T L C G LH +++ GL+ V VG +LI MY + G + +ARRVFD+
Sbjct: 104 ITFVTVLDGCSAIGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDK 163
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +D VSW +++ Y Q D VEA+ M G+ + +++ +A SAC H +++
Sbjct: 164 LALQDVVSWTSMIMTYVQH-DRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMAD 222
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GK IH ++ G+ + V V +++ Y KC DA +VF RM N +SW +++ +
Sbjct: 223 GKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQ 282
Query: 238 -----DAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+A+ F+ M+L G+ P+ VTFI +++A S + G ++H ++ + +
Sbjct: 283 HGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLI 342
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V NC++TMY+ + ++ F + R+ ISWN +ISG+AQ G AV F ++ E
Sbjct: 343 VGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEG 402
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ +TF S+++ ++ + +++ G++ D + SAL++M+ + G++ E
Sbjct: 403 ITPDKFTFISIIDGTA-----RMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVRE 457
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F++ +++ WT+IIS+ +HG + + + M +G+ + T ++ L C
Sbjct: 458 ARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACAS 517
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
+ +G+ L + + SP + +++M + G LEEA+ + Q
Sbjct: 518 LTALSEGK-LIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQ 565
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 229/465 (49%), Gaps = 14/465 (3%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ L C G +HS + + V NA I MY + G + +A VF +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+ VSWN++L+ + +DG + +A M +GL D ++F + C +L G
Sbjct: 64 DHPSQVSWNSLLAAFARDGQF-QQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRG 122
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
K +HG ++ G +V VG L+ Y KC DA +VF ++ ++V+SWT+MI +
Sbjct: 123 KLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQH 182
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+A+ LF MR GV PN +T+ I A + + +G++IH ++ F S+ V
Sbjct: 183 DRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVS 242
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-- 351
++ MY + S++D+ +VF+ + +SWNA+++ Q+G + A+ F + +
Sbjct: 243 CAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGI 302
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P+ TF ++LNA + +L G+ H I++ G D+ IVG+ ++ MY G I +
Sbjct: 303 TPDKVTFITILNACSSPA--TLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNA 360
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
F+ E+ +W IIS A+ G + ++ F+ M +G+ PD TF+S++ R
Sbjct: 361 AAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTAR- 419
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ + ++ + +E S +++M R G + EA L
Sbjct: 420 ---MQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSL 461
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
Query: 359 GSVLNAVG-AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
G+ L +G A+ ++ G+ HS + D +V +A + MYGK G + ++ VF
Sbjct: 3 GTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQS 62
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
S+ +W ++++A AR G ++ F+ M+ +G+ PD ITF++VL C G + +G
Sbjct: 63 LDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRG 122
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ L + + +E + + ++ M G+ G +E+A + ++
Sbjct: 123 K-LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKL 164
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 208/635 (32%), Positives = 349/635 (54%), Gaps = 16/635 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+ +Y +G A +F+ L D + WN +L+G+ K+ D AL M V ++
Sbjct: 219 IKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNS 278
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V++ LS C G+QLH L+++ G +S+ V N +ITMYS+ G L +AR++FD
Sbjct: 279 VSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDI 338
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D+V+WN +++GY Q+G + EA+ M+ G++LD ++F S + +L+
Sbjct: 339 MPQTDTVTWNGLIAGYVQNG-FTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKY 397
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
K++H ++ G V + + L+ Y K A K F++ +V T MIS
Sbjct: 398 CKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVL 457
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+N E A++LF+ + +G+ PN +T ++ A + +K G+ +H +K +
Sbjct: 458 NGLNVE-ALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQ 516
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
V + + MYA+ + + + F + ++ + WN +I ++QNG A+ F +
Sbjct: 517 VGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSG 576
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+K ++ + + L+A A +L +G+ H +++ SD V S L+DMY K G +
Sbjct: 577 TKFDSVSLSATLSA--CANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLAL 634
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF+ K+E +W +II+A HG ++ F EM G++PD +TFL +++ CG
Sbjct: 635 ARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGH 694
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G + F M ++Y I +H++CMVD+ GR GRL EA + + +P P
Sbjct: 695 AGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWG 754
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLLGACR+HGNVE+ + + L++++P SG YVL+SN++A G+WE V +R MK KG
Sbjct: 755 SLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKG 814
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
V+K G+SW DV G H FS+ D HP+S EIY
Sbjct: 815 VQKIPGYSWIDVN--GGTHMFSAADGCHPQSVEIY 847
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 142/527 (26%), Positives = 258/527 (48%), Gaps = 17/527 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY F +F L + WN ++ GF D AL F RM V D
Sbjct: 118 LGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDK 177
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + C +H L G ++++G++LI +Y+ G + +A+ +FDE
Sbjct: 178 YTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDE 237
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P +D + WN +L+GY ++GD+ A+ EM ++ + VSF S C +
Sbjct: 238 LPVRDCILWNVMLNGYVKNGDFN-SALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRA 296
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
G Q+HG+ I+ G+ + +V N +++ YSKC DA K+F M + ++W +I+
Sbjct: 297 GIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQ 356
Query: 236 ---REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++AV+LFK M GV + +TF + ++ +K + +H ++ + +
Sbjct: 357 NGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYL 416
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
+ L+ +Y + ++ + K F + + ++ A+ISGY NGL++ A+ F +I+E
Sbjct: 417 KSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGM 476
Query: 353 -PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
PN T SVL A A SLK G+ H I+K GL++ VGS++ MY K G + +
Sbjct: 477 VPNCLTMASVLPACAALA--SLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLA 534
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ F K W +I + +++G E ++ F++M G + DS++ + L+ C
Sbjct: 535 YQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANY 594
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEEL 516
++ G+ L ++++ I D + S ++DM + G+L A +
Sbjct: 595 PALYYGKELHCFVVRNSFIS---DTFVASTLIDMYSKCGKLALARSV 638
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 5/258 (1%)
Query: 266 SIGNLVKEG-RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
S +LVK+ R IH + ++ + ++ MY S +D +F L + W
Sbjct: 86 SDASLVKQQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPW 145
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
N LI G++ G A+ FF ++ + P+ YTF V+ A G ++ L + H
Sbjct: 146 NWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPL--CKMVHELA 203
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
+G D +GS+L+ +Y G I +++ +F+E + W +++ ++GD+ S +
Sbjct: 204 RSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSAL 263
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
F+EM N V+P+S++F+ +L+VC G++ G L +++ E P + ++ M
Sbjct: 264 GTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRS-GFESDPTVANTIITM 322
Query: 504 LGRVGRLEEAEELVGQIP 521
+ G L +A ++ +P
Sbjct: 323 YSKCGNLFDARKIFDIMP 340
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 217/645 (33%), Positives = 351/645 (54%), Gaps = 17/645 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVL---SGFEKSDDALSFALRMNLIGVVFDAVTY 60
Y K G A +F+ + + +V+W ++ +G D+A +M + D VT+
Sbjct: 85 YVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTF 144
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVY--VGNALITMYSRWGRLVEARRVFDEM 118
+T L C D Q+H+ VK G D+ ++ V N L+ Y RL A +F+E+
Sbjct: 145 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEI 204
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+KDSV++N +++GY +DG Y EAI ++M + G + +F+ A + LG
Sbjct: 205 LDKDSVTFNTLITGYEKDGLY-TEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALG 263
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+Q+HG+S+ G+ SVGN ++ YSK + + +F M + + +S+ +IS
Sbjct: 264 QQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQA 323
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E++++LF+EM+ G + F ++ + + ++ GR +H I S V
Sbjct: 324 EQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVG 383
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N L+ MYA+ E ++E +F LS R +SW ALISGY Q GL A ++ F + + +
Sbjct: 384 NSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLR 443
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
+ TF +VL A +A SL G++ H+ II+ G + GS L+DMY K GSI ++
Sbjct: 444 ADQSTFATVLKA--SAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 501
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+VF E +++ +W A+ISA A +GD E+ + F +M G++PDS++ L VL C G
Sbjct: 502 QVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCG 561
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+ +G F +M Y I P HY+CM+D+LGR GR EAE+L+ ++P P + S+
Sbjct: 562 FVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 621
Query: 533 LGACRIHGNVEMGERIADALMKMEP-AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
L ACRI+ N + ER A+ L ME + +YV MSN+YA G WE V ++K M+ +G+
Sbjct: 622 LNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGI 681
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K +SW +V +H FSS D THP +EI + L +E++
Sbjct: 682 KKVPAYSWVEVN--HKIHVFSSNDQTHPNGDEIVKKINELTTEIE 724
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 165/641 (25%), Positives = 298/641 (46%), Gaps = 64/641 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ YC+ + D A +F + + D V++NT+++G+EK +A+ L+M G
Sbjct: 185 LKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSD 244
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+S L + F G QLH L V G + VGN ++ YS+ R++E R +F+E
Sbjct: 245 FTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNE 304
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D VS+N ++S Y+Q Y E++ EM G + F + S + +L++
Sbjct: 305 MPELDFVSYNVVISSYSQAEQYE-ESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQV 363
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+Q+H +I + + VGN L+ Y+KCE+ +A +F+ + R+ +SWT +IS +
Sbjct: 364 GRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQ 423
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ LF +MR + + TF ++ A + + G+ +H I++ L
Sbjct: 424 KGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFS 483
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ L+ MYA+ S++D+ +VF+E+ R +SWNALIS YA NG AA+ AF +I+
Sbjct: 484 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGL 543
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD----SDPIVG--------SALL 399
+P++ + VL A H ++ G + PI G + +L
Sbjct: 544 QPDSVSILGVLIACS-------------HCGFVEQGTEFFQAMSPIYGITPKKKHYACML 590
Query: 400 DMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDY---ESVMNQFKEMENKGVR 455
D+ G+ G E++++ +E E E W+++++A + + E Q ME +R
Sbjct: 591 DLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEK--LR 648
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV-------------- 501
D+ ++S+ + G RH+ +M ++ I+ P + V
Sbjct: 649 -DAAAYVSMSNIYAAAGKWENVRHVKKAM-RERGIKKVPAYSWVEVNHKIHVFSSNDQTH 706
Query: 502 ----DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
+++ ++ L E G P SV+Q + +I ER+A A +
Sbjct: 707 PNGDEIVKKINELTTEIEREGYKPDTS--SVVQDIDEQMKIESLKYHSERLAVAFALIST 764
Query: 558 AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
V+M NL A + + ++ K +K + + + GF+
Sbjct: 765 PEGCPIVVMKNLRACRDCHAAIKLISKIVK-RVITTQPGFA 804
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 241/476 (50%), Gaps = 24/476 (5%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
N +I+ Y + G L AR +FD MP++ V+W IL G+ ++ EA +M R
Sbjct: 79 NTMISGYVKMGDLSSARHLFDAMPDRTVVTWT-ILMGWYAGNNHFDEAFKLFRQMCRSCT 137
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH--VSVGNVLMSTYSKCEVTGDA 213
D+V+FT+ C Q+H ++K+G+ T+ ++V NVL+ +Y + A
Sbjct: 138 LPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLA 197
Query: 214 NKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
+F + D++ +++ T+I+ +D A+ LF +MR G P+D TF G++ A+
Sbjct: 198 CVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGL 257
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ G+ +HGL + T F + SV N ++ Y++ + + ++ +F+E+ + +S+N +I
Sbjct: 258 HDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVI 317
Query: 329 SGYAQ-----NGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
S Y+Q L+L G + + P F ++L+ AA SL+ G++ H
Sbjct: 318 SSYSQAEQYEESLNLFREMQCMGFDRRNFP----FATMLSI--AANLSSLQVGRQVHCQA 371
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
I DS VG++L+DMY K E++ +F ++S +WTA+IS + G + + +
Sbjct: 372 IVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGL 431
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
F +M +R D TF +VL + G+ L +++ ++E + S +VDM
Sbjct: 432 KLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDM 490
Query: 504 LGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+ G +++A ++ ++P +S +L+ A +G+ GE A KM +G
Sbjct: 491 YAKCGSIKDAVQVFEEMPDRNAVS-WNALISAYADNGD---GEAAIGAFTKMIQSG 542
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 221/664 (33%), Positives = 368/664 (55%), Gaps = 26/664 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVFDAVT 59
+ + G D A IF +++ + V+ N ++ G + + A F +L+ + +A +
Sbjct: 295 FARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEI--NASS 352
Query: 60 YSTALS----FCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRV 114
Y+ LS F EG G ++H+ +++ L D + +GNAL+ +Y++ + AR +
Sbjct: 353 YAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSI 412
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F MP+KD+VSWN+I+SG + + EA+ M R G+ S S S+C
Sbjct: 413 FQLMPSKDTVSWNSIISGLDHNERFE-EAVACFHTMRRNGMVPSKFSVISTLSSCASLGW 471
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
+ LG+QIHG IK G VSV N L++ Y++ + + KVF M + + +SW + I
Sbjct: 472 IMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGA 531
Query: 233 ----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ A+ F EM G PN VTFI ++ A+S +L++ GR IH L +K +
Sbjct: 532 LATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVAD 591
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ ++ N L+ Y + E M+D E +F +S R+ +SWNA+ISGY NG+ A+ + +
Sbjct: 592 DNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLM 651
Query: 348 IKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+++ + + +T +VL+A + +L+ G H+ I+ L+++ +VGSAL+DMY K G
Sbjct: 652 MQKGQRLDDFTLATVLSACASVA--TLERGMEVHACAIRACLEAEVVVGSALVDMYAKCG 709
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I + R F ++ ++W ++IS ARHG + F +M+ G PD +TF+ VL+
Sbjct: 710 KIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLS 769
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G++ +G F SM + Y + P +H+SCMVD+LGR G +++ EE + +P P
Sbjct: 770 ACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNA 829
Query: 527 SVLQSLLGA-CRIHG-NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ +++LGA CR + N E+G R A L+++EP + +YVL+SN++A G WE V R
Sbjct: 830 LIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARL 889
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
M++ V+KE G SW + DG+H F +GD THP E+IY + + ++M+ L E
Sbjct: 890 AMRNAEVKKEAGCSWVTMK--DGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPET 947
Query: 645 AIAL 648
AL
Sbjct: 948 KYAL 951
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 221/422 (52%), Gaps = 22/422 (5%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLH I K GL S+V+ N L+ ++ R G LV A+++FDEMP K+ VSW+ ++SGY Q+G
Sbjct: 60 QLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNG 119
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGH--EKNLELGKQIHGVSIKMGYGTHVS 195
EA + ++ GL +H + SA AC L+LG +IHG+ K Y + +
Sbjct: 120 -MPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMV 178
Query: 196 VGNVLMSTYSKCEVT-GDANKVFRRMHDRNVISWTTMISM--NREDAVS---LFKEMRLD 249
+ NVLMS YS C + DA +VF + + SW ++IS+ R DA+S LF M+ +
Sbjct: 179 LSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQRE 238
Query: 250 GV---C-PNDVTFIGLIHAISIGNLVKEGRMIHGLCI----KTNFLSEPSVCNCLITMYA 301
C PN+ TF L+ +LV G + + K++F+ + V + L++ +A
Sbjct: 239 ATELNCRPNEYTFCSLVTVAC--SLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFA 296
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSV 361
R+ + ++ +F+++ R ++ N L+ G A+ A + F + + NA ++ +
Sbjct: 297 RYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVL 356
Query: 362 LNAVGAAEDIS--LKHGQRCHSHIIKVGL-DSDPIVGSALLDMYGKRGSIFESQRVFNET 418
L+A ++ + GQ H+++I+ L D ++G+AL+++Y K +I ++ +F
Sbjct: 357 LSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLM 416
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
K +W +IIS L + +E + F M G+ P + +S L+ C G I G+
Sbjct: 417 PSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQ 476
Query: 479 HL 480
+
Sbjct: 477 QI 478
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 255/510 (50%), Gaps = 28/510 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N++ ++G A +F+ + ++VSW+ ++SG+ ++ D+A + G++ +
Sbjct: 81 VNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNH 140
Query: 58 VTYSTALSFC--LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV-EARRV 114
+AL C L G+++H LI K S++ + N L++MYS + +ARRV
Sbjct: 141 YAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRV 200
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL----DHVSFTSAAS-AC 169
F+E+ K S SWN+I+S Y + GD + A M R+ L + +F S + AC
Sbjct: 201 FEEIKMKTSASWNSIISVYCRRGD-AISAFKLFSSMQREATELNCRPNEYTFCSLVTVAC 259
Query: 170 GH-EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
+ L L +Q+ K + + VG+ L+S +++ + A +F +M DRN ++
Sbjct: 260 SLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTM 319
Query: 229 T-TMISMNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM----IHG 279
M+ + R E+A +FKEM+ D V N ++ L+ A + + +KEG+ +H
Sbjct: 320 NGLMVGLARQHQGEEAAKIFKEMK-DLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHA 378
Query: 280 LCIKTNFLSE-PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
I+ + + N L+ +YA+ ++ ++ +F + ++ +SWN++ISG N
Sbjct: 379 YLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFE 438
Query: 339 AAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
AV F + + P+ ++ S L++ + I L GQ+ H IK GLD D V +A
Sbjct: 439 EAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIML--GQQIHGEGIKCGLDLDVSVSNA 496
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA-RHGDYESVMNQFKEMENKGVRP 456
LL +Y + + E Q+VF E + +W + I ALA + F EM G +P
Sbjct: 497 LLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKP 556
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ +TF+++L+ ++ GR + +LK
Sbjct: 557 NRVTFINILSAVSSLSLLELGRQIHALILK 586
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 250/529 (47%), Gaps = 53/529 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+N+Y K D A IF + + D VSWN+++SG E+ ++A++ M G+V
Sbjct: 397 VNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSK 456
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + LS C + G Q+H +K GLD +V V NAL+T+Y+ + E ++VF
Sbjct: 457 FSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFL 516
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D VSWN+ + ++AI +EMM+ G + + V+F + SA LEL
Sbjct: 517 MPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLEL 576
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMISMNR 236
G+QIH + +K ++ N L++ Y KCE D +F RM + R+ +SW MIS
Sbjct: 577 GRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYI 636
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ A+ L M G +D T ++ A + ++ G +H I+ +E
Sbjct: 637 HNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVV 696
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + L+ MYA+ + + + F+ + R I SWN++ISGYA++G A++ F + +
Sbjct: 697 VGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHG 756
Query: 352 K-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ P+ TF VL+A H ++ G + + G ++E
Sbjct: 757 QLPDHVTFVGVLSACS-------------HVGLVDEGFEH-----------FKSMGEVYE 792
Query: 411 -SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ R+ + ++ ++ L R GD + + K M + P+++ + ++L C
Sbjct: 793 LAPRIEH---------FSCMVDLLGRAGDVKKLEEFIKTMP---MNPNALIWRTILGACC 840
Query: 470 RNGMIHK--GRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVGRLEEAEE 515
R + GR +++ +EP + +Y + +M G+ E+ EE
Sbjct: 841 RANSRNTELGRRAAKMLIE---LEPLNAVNYVLLSNMHAAGGKWEDVEE 886
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 150/313 (47%), Gaps = 16/313 (5%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
V++ +H KT S+ CN L+ ++ R ++ ++K+FDE+ + ++SW+ L+SG
Sbjct: 55 VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSG 114
Query: 331 YAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
YAQNG+ A F G+I PN Y GS L A LK G H I K
Sbjct: 115 YAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYA 174
Query: 390 SDPIVGSALLDMYGK-RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
SD ++ + L+ MY SI +++RVF E + K+ +W +IIS R GD S F
Sbjct: 175 SDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSS 234
Query: 449 MENKGV----RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS---PDHY--SC 499
M+ + RP+ TF S++TV ++ G L + ML IE S D Y S
Sbjct: 235 MQREATELNCRPNEYTFCSLVTVAC--SLVDCGLTLLEQMLA--RIEKSSFVKDLYVGSA 290
Query: 500 MVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+V R G ++ A+ + Q+ +++ ++G R H E +I + +
Sbjct: 291 LVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQG-EEAAKIFKEMKDLVEIN 349
Query: 560 SGSYVLMSNLYAE 572
+ SY ++ + + E
Sbjct: 350 ASSYAVLLSAFTE 362
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 146/291 (50%), Gaps = 13/291 (4%)
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+E Q+H K G + V N L++ + + A K+F M +N++SW+ ++S
Sbjct: 54 TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVS 113
Query: 234 MNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IG-NLVKEGRMIHGLCIKTNF 286
+ +A LF+ + G+ PN + A +G N++K G IHGL K+ +
Sbjct: 114 GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPY 173
Query: 287 LSEPSVCNCLITMYARFE-SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
S+ + N L++MY+ S+ D+ +VF+E+ + SWN++IS Y + G +++A + F
Sbjct: 174 ASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFS 233
Query: 346 GVIKES-----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
+ +E+ +PN YTF S++ + D L ++ + I K D VGSAL+
Sbjct: 234 SMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVS 293
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+ + G I ++ +F + +++ ++ LAR E FKEM++
Sbjct: 294 GFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKD 344
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 55/104 (52%)
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+ +++ + H I K GL SD + L++++ + G++ +Q++F+E +K+ +W+
Sbjct: 51 DSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSC 110
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
++S A++G + F+ + + G+ P+ S L C G
Sbjct: 111 LVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELG 154
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 205/626 (32%), Positives = 336/626 (53%), Gaps = 15/626 (2%)
Query: 21 NNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGL 77
++ D+ WN LS + ++ + A+ M V D++TY LS G
Sbjct: 258 DDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGK 317
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H +V+FG D V V N+ I MY + G + ARR+F +M D +SWN ++SG + G
Sbjct: 318 QIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSG 377
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGH-EKNLELGKQIHGVSIKMGYGTHVSV 196
L I+++R GL D + TS AC E++ +G+Q+H ++K G V
Sbjct: 378 LEECSLRL-FIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFV 436
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM-----ISMNREDAVSLFKEMRLDGV 251
L+ YSK +A +F ++ SW M +S N +A+ LF M G
Sbjct: 437 STALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGE 496
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
+ +TF A +++G+ IH + IK F + V + ++ MY + M+ + K
Sbjct: 497 KADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARK 556
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAED 370
VF+++ + ++W +ISG +NG A+ + + + +P+ YTF +++ A
Sbjct: 557 VFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLL-- 614
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+L+ G++ H++I+K+ DP V ++L+DMY K G+I ++ +F +S W A+I
Sbjct: 615 TALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMI 674
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
LA+HG+ E +N F EM+++GV PD +TF+ VL+ C +G+ FDSM K Y +
Sbjct: 675 VGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGV 734
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIAD 550
EP +HYSC+VD L R G ++EAE++V +P ++ ++LL ACR+ G+ E GER+A+
Sbjct: 735 EPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAE 794
Query: 551 ALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHG 610
L M+P+ S +YVL+SN+YA WE R MK V+KE GFSW D+ + +H
Sbjct: 795 KLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMK--NKVHL 852
Query: 611 FSSGDNTHPRSEEIYRMAECLGSEMK 636
F +GD +H ++ IY E + +K
Sbjct: 853 FVAGDRSHEETDLIYNKVEYVMKRIK 878
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 157/645 (24%), Positives = 285/645 (44%), Gaps = 86/645 (13%)
Query: 1 MNMYCKSGQFDKALCIFN--NLNNPDIVSWNTVLSGF---------EKSDDALSFALRMN 49
+ MY K G A +F+ ++ D+V++N +L+ + EK+ +A +
Sbjct: 55 ITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLR 114
Query: 50 LIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
++ T S CL + L VK GL +V+V AL+ +Y+++ R+
Sbjct: 115 QSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIR 174
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
EAR +FD MP +D V WN ++ Y + G G E + R GLR D VS
Sbjct: 175 EARVLFDRMPVRDVVLWNVMMKAYVEMGA-GDEVLGLFSAFHRSGLRPDCVSVR------ 227
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
+I MG G L +V A K+F D +V W
Sbjct: 228 ---------------TILMGVGKKTVFERELE------QVRAYATKLFVCDDDSDVTVWN 266
Query: 230 TMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
+S + +AV F++M V + +T+I ++ ++ N ++ G+ IHG ++
Sbjct: 267 KTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRF 326
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
+ SV N I MY + S+ + ++F ++ ++ISWN +ISG A++GL +++ F
Sbjct: 327 GWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLF 386
Query: 345 FGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+++ P+ +T SVL A + E+ S G++ H+ +K G+ D V +AL+D+Y
Sbjct: 387 IDLLRSGLLPDQFTITSVLRACSSLEE-SYCVGRQVHTCALKAGIVLDSFVSTALIDVYS 445
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G + E++ +F+ +W A++ +Y + F M +G + D ITF +
Sbjct: 446 KGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFAN 505
Query: 464 VLTVCGRNGMIHKGRHLFDSMLK-DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
G + +G+ + ++K +H + S ++DM + G ++ A ++ QIP
Sbjct: 506 AAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFV--ISGILDMYLKCGEMKSARKVFNQIPS 563
Query: 523 G----------------------------------PGLSVLQSLLGACRIHGNVEMGERI 548
P +L+ AC + +E G++I
Sbjct: 564 PDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQI 623
Query: 549 ADALMKMEPAGSGSYVLMS--NLYAEKGDWEMVAILRKGMKSKGV 591
+MK+ A +V+ S ++YA+ G+ E L + M ++ V
Sbjct: 624 HANIMKLNCAFD-PFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSV 667
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 210/458 (45%), Gaps = 44/458 (9%)
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP--NKDSVSWNAIL 130
+ G + H++IV GL+ + YV N LITMY++ G L AR++FD P ++D V++NAIL
Sbjct: 29 LILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAIL 88
Query: 131 SGYTQDGD-YGVEAI---LALIEMMRKGLRL-DHVSFTSAASACGHEKNLELGKQIHGVS 185
+ Y G+ + VE + ++R+ + L + + C + + + G +
Sbjct: 89 AAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYA 148
Query: 186 IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAV 240
+K+G V V L++ Y+K + +A +F RM R+V+ W M+ E + +
Sbjct: 149 VKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVL 208
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
LF G+ P+ V+ ++ G+ KT F E T
Sbjct: 209 GLFSAFHRSGLRPDCVSV---------------RTILMGVGKKTVFERELEQVRAYAT-- 251
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFG 359
K+F ++ WN +S Y Q G AV F +IK P ++ T+
Sbjct: 252 ----------KLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYI 301
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
+L+ V + + L G++ H +++ G D V ++ ++MY K GS+ ++R+F + +
Sbjct: 302 VILSVVASLNHLEL--GKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK 359
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR-NGMIHKGR 478
E +W +IS AR G E + F ++ G+ PD T SVL C GR
Sbjct: 360 EVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGR 419
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ LK + S + ++D+ + G++EEAE L
Sbjct: 420 QVHTCALKAGIVLDSFVS-TALIDVYSKGGKMEEAELL 456
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/367 (17%), Positives = 150/367 (40%), Gaps = 52/367 (14%)
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF--RRMHDRNVISWT 229
+ +L LGK+ H V + G V N L++ Y+KC A K+F DR+++++
Sbjct: 26 DSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYN 85
Query: 230 TMISM-----------NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
+++ +A +F+ +R + T L + +
Sbjct: 86 AILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQ 145
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
G +K + V L+ +YA+F+ ++++ +FD + R+++ WN ++ Y + G
Sbjct: 146 GYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAG- 204
Query: 339 AAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL---DSDPI 393
V F S +P+ + ++L VG + + + ++ ++ K+ + DSD
Sbjct: 205 DEVLGLFSAFHRSGLRPDCVSVRTILMGVG-KKTVFERELEQVRAYATKLFVCDDDSDVT 263
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
V W +S+ + G+ ++ F++M
Sbjct: 264 V-------------------------------WNKTLSSYLQAGEGWEAVDCFRDMIKSR 292
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
V DS+T++ +L+V + G+ + ++++ + + + ++M + G + A
Sbjct: 293 VPCDSLTYIVILSVVASLNHLELGKQIHGAVVR-FGWDQFVSVANSAINMYVKAGSVNYA 351
Query: 514 EELVGQI 520
+ GQ+
Sbjct: 352 RRMFGQM 358
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G + A +F +N + WN ++ G + +++AL+F M GV D
Sbjct: 643 VDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDR 702
Query: 58 VTYSTALSFCLDHEGFLFGL--QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT+ LS C H G S+ +G++ E+ + L+ SR G + EA +V
Sbjct: 703 VTFIGVLSAC-SHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVV 761
Query: 116 DEMPNKDSVS-WNAILSGYTQDGD 138
MP + S + + +L+ GD
Sbjct: 762 SSMPFEASATMYRTLLNACRVQGD 785
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE--F 424
A D L G+R H+ I+ GL+ D V + L+ MY K GS+F ++++F+ T +
Sbjct: 23 AIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLV 82
Query: 425 AWTAIISALARHGDYESV 442
+ AI++A A G+ V
Sbjct: 83 TYNAILAAYAHTGELHDV 100
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 217/655 (33%), Positives = 353/655 (53%), Gaps = 17/655 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+N+Y K G A +F+ +IV WN +L+GF E ++A+ M + D
Sbjct: 367 INLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDE 426
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L C F G Q+H + +K +D ++V NA + MYS++G + +A+ +F
Sbjct: 427 FTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSL 486
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P KDS+SWNA+ G Q+ + EA+ L M G+ D VSF++A +AC + + E
Sbjct: 487 IPYKDSISWNALTVGLAQNLEEE-EAVCMLKRMRLHGITPDDVSFSTAINACSNIRATET 545
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQIH ++IK G ++ +VG+ L+ YSK + K+F ++ +++ +I+
Sbjct: 546 GKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQ 605
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++A+ LF+++ DG+ P+ VTF ++ S G+ +H +K+ L + ++
Sbjct: 606 NNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTL 665
Query: 293 CNC-LITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIK- 349
L +Y + + ++D+ K+ E+ + + W A+ISGYAQNG ++ +F+ +
Sbjct: 666 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC 725
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ + TF SVL A ++ + G+ H I K G S SAL+DMY K G +
Sbjct: 726 NVRSDEATFASVLKAC--SDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVI 783
Query: 410 ESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S F E + K + W ++I A++G + + F++ME ++PD +TFL VL C
Sbjct: 784 SSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIAC 843
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G+I +GRH F SM K Y + P DHY+C +D+LGR G L+EA+E + Q+P P V
Sbjct: 844 THSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVV 903
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+ L ACR+H + E G+ A L+++EP S +YVL+S+L+A G+W + R+ M+
Sbjct: 904 WATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMRE 963
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
KGV K G SW VG+ L F D HP + IY M L MK N E
Sbjct: 964 KGVAKFPGCSWITVGNKTSL--FLVQDKYHPDNLRIYEMLGDLTGMMKKDNDIDE 1016
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/479 (33%), Positives = 257/479 (53%), Gaps = 26/479 (5%)
Query: 7 SGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDA--------- 57
SG+ D A + + P V+WN V+SG +S L N++G+ D
Sbjct: 272 SGRLDHATALLKKMPTPSTVAWNAVISGHAQS------GLEFNVLGLYKDMRSWGLWPTR 325
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ LS + + F+ G Q+H+ V GLD+ V+VG++LI +Y++ G +A+ VFD
Sbjct: 326 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 385
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
K+ V WNA+L+G+ Q+ + EAI MMR L+ D +F S AC + + L
Sbjct: 386 SCEKNIVMWNAMLTGFVQN-ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 444
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GKQ+H V+IK + V N + YSK GDA +F + ++ ISW +
Sbjct: 445 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 504
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++ E+AV + K MRL G+ P+DV+F I+A S + G+ IH L IK S +V
Sbjct: 505 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 564
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LI +Y++ ++ S K+F ++ I+ NALI+G+ QN A+Q F V+K+
Sbjct: 565 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 624
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFE 410
KP++ TF S+L+ G + ++ G++ H + +K G L D ++G +L +Y K + +
Sbjct: 625 KPSSVTFSSILS--GCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLED 682
Query: 411 SQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ ++ E + K+ F WTAIIS A++G + + F M + VR D TF SVL C
Sbjct: 683 ANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKAC 741
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 239/494 (48%), Gaps = 53/494 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G A +F+ + PD + W+++++ + + +AL+ RM+ +G D
Sbjct: 200 VDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQ 259
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT T +I+ + GRL A + +
Sbjct: 260 VTLVT-----------------------------------IISTLASSGRLDHATALLKK 284
Query: 118 MPNKDSVSWNAILSGYTQDG-DYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNL 175
MP +V+WNA++SG+ Q G ++ V L L + MR GL +F S SA + K
Sbjct: 285 MPTPSTVAWNAVISGHAQSGLEFNV---LGLYKDMRSWGLWPTRSTFASMLSAAANMKAF 341
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
G+Q+H ++ G +V VG+ L++ Y+KC DA VF ++N++ W M++
Sbjct: 342 VEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGF 401
Query: 234 -MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
N E+A+ +F+ M + ++ TF+ ++ A + + G+ +H + IK
Sbjct: 402 VQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISL 461
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
V N + MY+++ ++ D++ +F + ++ ISWNAL G AQN AV + +
Sbjct: 462 FVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLH 521
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ +F + +NA + + G++ H IK G+ S+ VGS+L+D+Y K G +
Sbjct: 522 GITPDDVSFSTAINACSNIR--ATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVE 579
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC- 468
S+++F + S A+I+ ++ + + + F+++ G++P S+TF S+L+ C
Sbjct: 580 SSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 639
Query: 469 -GRNGMIHKGRHLF 481
N I K H +
Sbjct: 640 GSLNSAIGKQVHCY 653
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/531 (24%), Positives = 241/531 (45%), Gaps = 51/531 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DAL-SFALRMNLIGVVFD 56
+ +YCKSG+ A + +++LS +S D L +F G D
Sbjct: 98 VELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPD 157
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ LS C +G Q+H +VK G S V+ AL+ MY++ G + ARRVFD
Sbjct: 158 QFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFD 217
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ D++ W+++++ Y + G Y EA+ M + G D V+ +
Sbjct: 218 GIACPDTICWSSMIACYHRVGCYQ-EALALFSRMDKMGSAPDQVTLVT------------ 264
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
++ST + A + ++M + ++W +IS +
Sbjct: 265 -----------------------IISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHA 301
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + + L+K+MR G+ P TF ++ A + EG+ +H + +
Sbjct: 302 QSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVF 361
Query: 292 VCNCLITMYARFESMQDSEKVFDELSC-REIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + LI +YA+ D++ VFD LSC + I+ WNA+++G+ QN L A++ F +++
Sbjct: 362 VGSSLINLYAKCGCPSDAKNVFD-LSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRY 420
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ + + +TF S+L A L G++ H IK +D V +A LDMY K G+I
Sbjct: 421 TLQTDEFTFVSILGACTYLSSFYL--GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIG 478
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++ +F+ K +W A+ LA++ + E + K M G+ PD ++F + + C
Sbjct: 479 DAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACS 538
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
G+ + +K Y I + S ++D+ + G +E + ++ Q+
Sbjct: 539 NIRATETGKQIHCLAIK-YGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV 588
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 207/455 (45%), Gaps = 56/455 (12%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH I++ G +G++L+ +Y + GR+ A + S + +++LS + + G
Sbjct: 78 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137
Query: 139 YGVEAILALIEMMR--KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G +L +R G R D SAC L G+Q+H +K G+ + V
Sbjct: 138 PG--DVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGV 251
L+ Y+KC +A +VF + + I W++MI+ ++A++LF M G
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ VT + + I L GR+ H +
Sbjct: 256 APDQVTLVTI-----ISTLASSGRLDH------------------------------ATA 280
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-----PNAYTFGSVLNAVG 366
+ ++ ++WNA+ISG+AQ+GL + G+ K+ + P TF S+L+A
Sbjct: 281 LLKKMPTPSTVAWNAVISGHAQSGLEFNVL----GLYKDMRSWGLWPTRSTFASMLSA-- 334
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
AA + GQ+ H+ + GLD++ VGS+L+++Y K G +++ VF+ + EK+ W
Sbjct: 335 AANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMW 394
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
A+++ ++ E + F+ M ++ D TF+S+L C + G+ + +K
Sbjct: 395 NAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 454
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ ++ S + +DM + G + +A+ L IP
Sbjct: 455 NC-MDISLFVANATLDMYSKYGAIGDAKALFSLIP 488
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 124/308 (40%), Gaps = 42/308 (13%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
+ +HG ++ G +G+ L+ Y K G A +R + ++++S +
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 238 ----DAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
D + F+ +R G P+ ++ A S ++ GR +H +K+ F S
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
L+ MYA+ + ++ +VFD ++C + I W+++I+ Y + G A+ F
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALF-------- 247
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
S + K+G D + ++ G + +
Sbjct: 248 ----------------------------SRMDKMGSAPDQVTLVTIISTLASSGRLDHAT 279
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+ + S AW A+IS A+ G +V+ +K+M + G+ P TF S+L+
Sbjct: 280 ALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 339
Query: 473 MIHKGRHL 480
+G+ +
Sbjct: 340 AFVEGQQM 347
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Query: 374 KHGQRC---HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+H Q C H I++ G +G +L+++Y K G + + E++ A ++++
Sbjct: 70 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 129
Query: 431 SALARHGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
S AR G V+ F+ + G RPD VL+ C R G++ GR + ++K
Sbjct: 130 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS-G 188
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
S + +VDM + G + A + I
Sbjct: 189 FSSSVFCEAALVDMYAKCGDVPNARRVFDGI 219
>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 650
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 207/599 (34%), Positives = 333/599 (55%), Gaps = 30/599 (5%)
Query: 61 STALSFCLDHEGFLFGLQLHSLIVK----FGLD----SEVYVGNALITMYSRWGRLVEAR 112
++ L+ C G +H+ I+K F D + +++ N+L++MYS+ G A
Sbjct: 38 TSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNAG 97
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAASACG 170
VFD MP +D+VSWN ++SG+ ++GD+ + + E R R D + T+ S C
Sbjct: 98 NVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGC- 156
Query: 171 HEKNLELG------KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
L LG + IHG+ G+ ++VGN L+++Y KCE KVF M +RN
Sbjct: 157 --DGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERN 214
Query: 225 VISWTTMIS---MNR--EDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIH 278
V++WT +IS N ED++ LF +MR G V PN +T++ + A S ++++G+ IH
Sbjct: 215 VVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIH 274
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
GL K S+ + + L+ +Y++ S+ + ++F+ + +S ++ +AQNG
Sbjct: 275 GLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEE 334
Query: 339 AAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A+Q F ++ + +A +VL G ++L G++ HS IIK +P VG+
Sbjct: 335 EAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLAL--GKQIHSLIIKKNFCENPFVGNG 392
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L++MY K G + +S VF + +K+ +W ++I+A ARHGD + ++EM +GV P
Sbjct: 393 LVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPT 452
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
+TFLS+L C G++ KG L +SM D+ I P +HY+C+VDMLGR G L EA++ +
Sbjct: 453 DVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFI 512
Query: 518 GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
+P G+ V Q+LLGAC IHG+ EMG+ AD L PA YVLM+N+Y+ +G+W+
Sbjct: 513 EGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYVLMANIYSSEGNWK 572
Query: 578 MVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
A K MK GV KEVG SW ++ ++ F GD HP ++ I+ + L +K
Sbjct: 573 ERASSIKRMKEMGVAKEVGISWIEIE--KKVNSFVVGDKLHPEADVIFWVLSGLLKHLK 629
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 234/461 (50%), Gaps = 27/461 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRM---NLIGVV 54
++MY K G+F A +F+ + D VSWNT++SGF ++ D + F +M N +
Sbjct: 84 LSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCR 143
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQ------LHSLIVKFGLDSEVYVGNALITMYSRWGRL 108
FD T +T LS C +G G+ +H L+ G + E+ VGNALIT Y +
Sbjct: 144 FDKATLTTMLSGC---DGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECF 200
Query: 109 VEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR--KGLRLDHVSFTSAA 166
+ R+VFDEM ++ V+W A++SG Q+ Y E L L MR + + +++ S+
Sbjct: 201 SQGRKVFDEMIERNVVTWTAVISGLAQNEFY--EDSLRLFAQMRCCGSVSPNVLTYLSSL 258
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
AC + L G++IHG+ K+G + + + + LM YSKC A ++F + + +
Sbjct: 259 MACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGV 318
Query: 227 SWTTMI---SMN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
S T ++ + N E+A+ +F +M G+ + ++ +G + G+ IH L
Sbjct: 319 SLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLI 378
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IK NF P V N L+ MY++ + DS VF +++ + +SWN++I+ +A++G A+
Sbjct: 379 IKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKAL 438
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
Q + + ++ P TF S+L+A A + K + S G+ + ++D
Sbjct: 439 QFYEEMRVEGVAPTDVTFLSLLHACSHAGLVE-KGMELLESMTNDHGISPRSEHYACVVD 497
Query: 401 MYGKRGSIFESQRVFNETQEK-SEFAWTAIISALARHGDYE 440
M G+ G + E+++ E W A++ A + HGD E
Sbjct: 498 MLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSIHGDSE 538
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 191/406 (47%), Gaps = 25/406 (6%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKM--------GYGTHVSVGNVLMSTYSKCE 208
L+H TS + CG ++NL LG IH IK + + N L+S YSKC
Sbjct: 32 LNHADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCG 91
Query: 209 VTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEM-RLDGVC-----PNDVT 257
+A VF M R+ +SW TMIS + + + FK+M + VC T
Sbjct: 92 EFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTT 151
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
+ + +G +MIHGL F E +V N LIT Y + E KVFDE+
Sbjct: 152 MLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMI 211
Query: 318 CREIISWNALISGYAQNGLSLAAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKH 375
R +++W A+ISG AQN +++ F PN T+ S L A + L+
Sbjct: 212 ERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQ--VLRD 269
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
GQ+ H + K+G+ SD + SAL+D+Y K GS+ + ++F +E + T I+ A A+
Sbjct: 270 GQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQ 329
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
+G E + F +M G+ D+ +VL V G + G+ + ++K E +P
Sbjct: 330 NGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCE-NPF 388
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+ +V+M + G L ++ + Q+ +S S++ A HG+
Sbjct: 389 VGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVS-WNSVIAAFARHGD 433
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 211/640 (32%), Positives = 351/640 (54%), Gaps = 20/640 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++M+ ++A +FNN+ D +SWN++++ + +++L M D
Sbjct: 393 ISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDY 452
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T S L C + +G LH LI K GL+S V V N+L++MY++ G +A VF
Sbjct: 453 ITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHT 512
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D +SWN++++ + +DG Y AIL L+EM++ +++V+FT+A SAC NLE
Sbjct: 513 MPARDLISWNSMMASHVEDGKYS-HAILLLVEMLKTRKAMNYVTFTTALSAC---YNLEK 568
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
K +H I ++ +GN L++ Y K + +A KV + M +R+V++W +I + +
Sbjct: 569 LKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHAD 628
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLI-HAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
D + F MR +G+ N +T + L+ +S L+K G IH + F +
Sbjct: 629 DKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTY 688
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + LITMYA+ + S +FD L+ + +WNA+ S A G A++ F ++
Sbjct: 689 VQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALK-FIARMRND 747
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ ++F L +G L GQ+ HS IIK+G + D V +A +DMYGK G I
Sbjct: 748 GVDLDQFSFSVALATIGNL--TVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEID 805
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ R+ + +S+ +W +ISALARHG + F EM + G++PD +TF+S+L+ C
Sbjct: 806 DVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACS 865
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G F SM ++ + + +H C++D+LGR GRL EAE + ++P P V
Sbjct: 866 HGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVW 925
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+SLL AC++HGN+E+G + AD L ++ + +YVL SN+ A W V +RK M+S+
Sbjct: 926 RSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQ 985
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
++K+ SW + + + F GD HP+S +IY E
Sbjct: 986 SLKKKPACSWIKLK--NKVMTFGMGDQFHPQSAQIYAKLE 1023
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 242/481 (50%), Gaps = 21/481 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMY K G A +F+ + + + SWN ++SGF + A+ F M GV +
Sbjct: 189 VNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSS 248
Query: 58 VTYSTALSFCLDHEGFLF--GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ ++ C D G + Q+H +VK GL S V+VG +L+ Y G + EA ++F
Sbjct: 249 YVIASMVTAC-DRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLF 307
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKN 174
+E+ + VSW +++ Y +G + +L + +R GL + + CG +
Sbjct: 308 EEIEEPNIVSWTSLMVCYADNGH--TKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGD 365
Query: 175 LELGKQIHGVSIKMGYGT-HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+G QI G IK G T VSV N L+S + + +A++VF M +R+ ISW ++I+
Sbjct: 366 KTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIIT 425
Query: 234 MNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ E+++ F MR + +T L+ A +K GR +HGL K+ S
Sbjct: 426 ASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLES 485
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
VCN L++MYA+ S +D+E VF + R++ISWN++++ + ++G A+ ++
Sbjct: 486 NVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEML 545
Query: 349 KESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
K K N TF + L+A E + + H+ +I + + I+G+ L+ MYGK G
Sbjct: 546 KTRKAMNYVTFTTALSACYNLEKLKI-----VHAFVIHFAVHHNLIIGNTLVTMYGKFGL 600
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ E+Q+V E+ W A+I A D + + F M +G+ + IT +++L
Sbjct: 601 MDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGT 660
Query: 468 C 468
C
Sbjct: 661 C 661
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 230/454 (50%), Gaps = 15/454 (3%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G LH+L VK + + N L+ MYS++G + A+ VFD+M +++ SWN ++SG+ +
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG-KQIHGVSIKMGYGTHV 194
G Y +A+ M G+ S +AC + G +QIHG +K G ++V
Sbjct: 226 VGWYH-KAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLD 249
VG L+ Y +ANK+F + + N++SWT+++ + + ++ +++++ +R +
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHN 344
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF-LSEPSVCNCLITMYARFESMQD 308
G+ T +I + G I G IK+ S SV N LI+M+ ++S+++
Sbjct: 345 GLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEE 404
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAY-TFGSVLNAVGA 367
+ +VF+ + R+ ISWN++I+ A NG ++ FF + + Y T ++L A G+
Sbjct: 405 ASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGS 464
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
A+ LK G+ H I K GL+S+ V ++LL MY + GS +++ VF+ + +W
Sbjct: 465 AQH--LKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWN 522
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
+++++ G Y + EM + +TF + L+ C N K H F
Sbjct: 523 SMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSAC-YNLEKLKIVHAFVIHFAV 581
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+H + +V M G+ G ++EA+++ +P
Sbjct: 582 HHNLIIGN---TLVTMYGKFGLMDEAQKVCKIMP 612
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 167/358 (46%), Gaps = 19/358 (5%)
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN- 235
+GK +H + +K + N L++ YSK A VF +M+DRN SW MIS
Sbjct: 165 VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224
Query: 236 ----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEP 290
A+ F M +GV P+ ++ A + EG R IHG +K +S
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V L+ Y S+ ++ K+F+E+ I+SW +L+ YA NG + + + +
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHT----KEVLNIYRH 340
Query: 351 SKPNAY-----TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGK 404
+ N T +V+ G D ++ G + +IK GLD+ + V ++L+ M+G
Sbjct: 341 LRHNGLICTGNTMATVIRTCGMFGDKTM--GYQILGDVIKSGLDTSSVSVANSLISMFGN 398
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
S+ E+ RVFN QE+ +W +II+A A +G +E + F M + D IT ++
Sbjct: 399 YDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISAL 458
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
L CG + GR L + K +E + + ++ M + G E+AE + +P
Sbjct: 459 LPACGSAQHLKWGRGLHGLITKS-GLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPA 515
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 134/257 (52%), Gaps = 5/257 (1%)
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
IS GN+ G+ +H LC+K N L+ MY++F S++ ++ VFD++ R SW
Sbjct: 160 ISEGNV---GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASW 216
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
N +ISG+ + G A+Q F + + P++Y S++ A + ++ + ++ H ++
Sbjct: 217 NNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMT-EGARQIHGYV 275
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
+K GL S+ VG++LL YG GS+ E+ ++F E +E + +WT+++ A +G + V+
Sbjct: 276 VKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVL 335
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
N ++ + + G+ T +V+ CG G G + ++K S + ++ M
Sbjct: 336 NIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISM 395
Query: 504 LGRVGRLEEAEELVGQI 520
G +EEA + +
Sbjct: 396 FGNYDSVEEASRVFNNM 412
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 357/646 (55%), Gaps = 17/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M + G+ A +F + D+ SWN ++ G+ KS D+AL RM GV D
Sbjct: 130 LSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDV 189
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L C + G ++H+ +++FG EV V NAL+TMY++ G ++ AR+VFD
Sbjct: 190 YTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDS 249
Query: 118 MPNKDSVSWNAILSGYTQDGD--YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M D +SWNA+++G+ ++G+ G+E L M+ ++ + ++ TS A G ++
Sbjct: 250 MTVMDCISWNAMIAGHFENGECNAGLELFLT---MLHDEVQPNLMTITSVTVASGLLSDV 306
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
K++HG+++K G+ V+ N L+ Y+ + A VF RM R+ ++WT MIS
Sbjct: 307 TFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGY 366
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++ A+ ++ M ++ V P+D+T + A + + G +H L F+S
Sbjct: 367 EKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYI 426
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N ++ MYA+ + + + +VF + ++++SW+++I+G+ N + A+ F ++ +
Sbjct: 427 VVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD 486
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN+ TF + A +L+ G+ H+H+++ G++ + + +AL+D+Y K G
Sbjct: 487 VKPNSVTF--IAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGY 544
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ F K +W +I+ HG ++ ++ F +M G PD +TF+++L C R
Sbjct: 545 AWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSR 604
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
GM+ +G LF SM + Y I P+ HY+CMVD+L R G+L EA + ++P P +V
Sbjct: 605 GGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWG 664
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL CRIH +VE+GE A ++ +EP +G +VL+ +LYA+ W+ +A +RK M+ KG
Sbjct: 665 ALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKG 724
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ + G SW +V + +H F + D +HP+ EI + E + MK
Sbjct: 725 LDHDSGCSWVEVKGV--VHAFLTDDESHPQIREINTVLEGIYERMK 768
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 203/400 (50%), Gaps = 12/400 (3%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+GNA+++M R+G A RVF +MP +D SWN ++ GY + G EA+ MM
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLD-EALDLYHRMMWA 183
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G+R D +F +CG + +G+++H ++ G+G V V N LM+ Y+KC A
Sbjct: 184 GVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAA 243
Query: 214 NKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
KVF M + ISW MI+ + E+ + LF M D V PN +T + A +
Sbjct: 244 RKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLL 303
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ V + +HGL +K F + + CN LI MYA M+ + VF + R+ ++W A+I
Sbjct: 304 SDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMI 363
Query: 329 SGYAQNGLSLAAVQAF-FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
SGY +NG A++ + + P+ T S L A SL G + H G
Sbjct: 364 SGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLG--SLDVGVKLHELAESKG 421
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA-RHGDYESVMNQF 446
S +V +A+L+MY K I ++ VF EK +W+++I+ H ++E+ + F
Sbjct: 422 FISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEA-LYYF 480
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ M V+P+S+TF++ L C G + G+ + +L+
Sbjct: 481 RHML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLR 519
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+G+A+L M + G + + RVF + E+ F+W ++ + G + ++ + M G
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
VRPD TF VL CG GR + +L+ + D + ++ M + G + A
Sbjct: 185 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLR-FGFGEEVDVLNALMTMYAKCGDVMAA 243
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
++ ++V+ + I G+ E GE
Sbjct: 244 RKVFDS------MTVMDCISWNAMIAGHFENGE 270
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 218/657 (33%), Positives = 350/657 (53%), Gaps = 19/657 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++ Y SG A +F + + + +W ++ ++ DALS M GV+ D
Sbjct: 81 LSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDR 140
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT +T L+ G LH +KFGLD+ V+V N L+ Y + G L ARRVF E
Sbjct: 141 VTVTTVLNL----PGCTVP-SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLE 195
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +KD+V++NA++ G +++G + +A+ M R G+ H +F+S + +L L
Sbjct: 196 MHDKDAVTYNAMMMGCSKEGLH-TQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLL 254
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G Q+H + ++ +V V N L+ YSKC+ D ++F M +R+ +S+ +I+
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 314
Query: 235 NREDA--VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N+ A + LF+EM+ G + + ++ V G+ IH + SE +
Sbjct: 315 NQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLL 374
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI MY++ + ++ F S + ISW ALI+GY QNG A+Q F + +
Sbjct: 375 GNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGL 434
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ TF S++ A + I L G++ HS++I+ G S GS L+DMY K G + E+
Sbjct: 435 RPDRATFSSIIKASSSLAMIGL--GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEA 492
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
R F+E E++ +W A+ISA A +G+ ++ + F+ M + G PDS+TFLSVL C N
Sbjct: 493 LRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHN 552
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G+ + F M Y I P +HY+C++D LGRVG + ++++ ++P + S
Sbjct: 553 GLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 612
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
+L +CRIHGN E+ AD L MEP + YV++SN+YA G WE A ++K M+ +GV
Sbjct: 613 ILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGV 672
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
RKE G+SW ++ ++ F+S D T P +EI + L EM K + AL
Sbjct: 673 RKESGYSWVEIK--QKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCAL 727
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 231/483 (47%), Gaps = 52/483 (10%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
L + +VK G D Y N + G L AR +FD+MP+K+ S N ILS Y+ GD
Sbjct: 30 LDARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGD 89
Query: 139 YGV------------------------------EAILALIEMMRKGLRLDHVSFTSAASA 168
+A+ M+ +G+ D V+ T+ +
Sbjct: 90 LPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNL 149
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
G +H +IK G THV V N L+ Y K + A +VF MHD++ +++
Sbjct: 150 PGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTY 204
Query: 229 TT-MISMNRE----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
M+ ++E A+ LF MR G+ TF ++ + + G +H L ++
Sbjct: 205 NAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLR 264
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ + V N L+ Y++ + + D ++FDE+ R+ +S+N +I+ YA N + ++
Sbjct: 265 STSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRL 324
Query: 344 F-----FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
F G ++ P + ++L+ G+ D+ + G++ H+ ++ +GL S+ ++G+AL
Sbjct: 325 FREMQKLGFDRQVLP----YATMLSVAGSLPDVHI--GKQIHAQLVLLGLASEDLLGNAL 378
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+DMY K G + ++ F+ EKS +WTA+I+ ++G +E + F +M G+RPD
Sbjct: 379 IDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDR 438
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
TF S++ MI GR L +++ + + S S +VDM + G L+EA
Sbjct: 439 ATFSSIIKASSSLAMIGLGRQLHSYLIRSGY-KSSVFSGSVLVDMYAKCGCLDEALRTFD 497
Query: 519 QIP 521
++P
Sbjct: 498 EMP 500
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 214/640 (33%), Positives = 355/640 (55%), Gaps = 22/640 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNN-PDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAV 58
MY K G D A+ +F +++ D+ SWN+++SG ++ AL M + ++
Sbjct: 208 MYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSY 267
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVG-NALITMYSRWGRLVEARRVFDE 117
T L C + G +LH+ ++K G SEV + NAL+ MY++ GR+ A RVF E
Sbjct: 268 TTVGVLQVCTELAQLNLGRELHAALLKSG--SEVNIQCNALLVMYTKCGRVDSALRVFRE 325
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD +SWN++LS Y Q+G Y EAI + EM+R G + DH S +SA GH L
Sbjct: 326 IDEKDYISWNSMLSCYVQNGLYA-EAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLN 384
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GK++H +IK + VGN LM Y KC + VF RM ++ ISWTT+I+ +
Sbjct: 385 GKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQ 444
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ +F+E + +G+ + + ++ A S + + +H I+ L + V
Sbjct: 445 SSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLL-DLVV 503
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N +I +Y + S K+F+ + ++I++W ++I+ YA +GL L F ++ +
Sbjct: 504 KNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGL-LNEALVLFAEMQSTD 562
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P++ S+L A+G SL G+ H +I+ + + S+L+DMY GS+
Sbjct: 563 VQPDSVALVSILGAIGGLS--SLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSG 620
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ +VFN + K WTA+I+A HG + ++ FK M GV PD ++FL++L C
Sbjct: 621 ALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSH 680
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+ ++++G+ D M+ Y +EP +HY+C+VD+LGR G+ EEA E + +P P V
Sbjct: 681 SKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWC 740
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLLGACR+H N E+ A+ L+++EP G+YVL+SN++AE G W +R + +G
Sbjct: 741 SLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERG 800
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI-YRMAE 629
+RK+ SW ++G + +H F++ DN+H +E I ++AE
Sbjct: 801 LRKDPACSWIEIG--NNVHTFTTRDNSHRDAERINLKLAE 838
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 213/407 (52%), Gaps = 20/407 (4%)
Query: 76 GLQLHSLIVKFGL--DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGY 133
G+Q+H+ V G + ++ L+ MY + GR+ +AR +FD M ++ SWNA++ Y
Sbjct: 77 GVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAY 136
Query: 134 TQDGDYGVEAILALIEMMR----KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
G EA L + MR G+ D + S A G E + G ++HG+++K G
Sbjct: 137 LSSGS-ACEA-LGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHG 194
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMISMNRED-----AVSLF 243
V N L++ Y+KC + A +VF MHD R+V SW +MIS ++ A+ LF
Sbjct: 195 LDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLF 254
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV-CNCLITMYAR 302
+ M+ + N T +G++ + + GR +H +K+ SE ++ CN L+ MY +
Sbjct: 255 RGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSG--SEVNIQCNALLVMYTK 312
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSV 361
+ + +VF E+ ++ ISWN+++S Y QNGL A++ +++ +P+ S+
Sbjct: 313 CGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSL 372
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
+AVG L +G+ H++ IK LDSD VG+ L+DMY K I S VF+ + K
Sbjct: 373 SSAVGHLG--WLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIK 430
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+WT II+ A+ + + F+E + +G++ D + S+L C
Sbjct: 431 DHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEAC 477
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 210/472 (44%), Gaps = 29/472 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
M+MY K + + +F+ + D +SW T+++ + +S +AL G+ D
Sbjct: 408 MDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDP 467
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + L C E L QLH ++ GL ++ V N +I +Y G + + ++F+
Sbjct: 468 MMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFET 526
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD V+W ++++ Y G EA++ EM ++ D V+ S A G +L
Sbjct: 527 VEQKDIVTWTSMINCYANSGLLN-EALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAK 585
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK++HG I+ + ++ + L+ YS C A KVF + ++++ WT MI+
Sbjct: 586 GKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGM 645
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP-- 290
+ + A+ LFK M GV P+ V+F+ L++A S LV EG+ + + T L EP
Sbjct: 646 HGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRL-EPWQ 704
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISG---YAQNGLSLAAVQAFFG 346
C++ + R +++ + + + + + W +L+ + + L++ A
Sbjct: 705 EHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLE 764
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ ++ N +V +G + + + I + GL DP + +++ G
Sbjct: 765 LEPDNPGNYVLVSNVFAEMG-----KWNNAKEVRARISERGLRKDP--ACSWIEI-GNNV 816
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDY----ESVMNQFKEMENKGV 454
F ++ + E+ I L + G Y SV++ E E V
Sbjct: 817 HTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDV 868
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 8/193 (4%)
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL--DSDPIVGSALLDMYGKRGSIFE 410
P +G VL+ V A + ++ G + H+H + G D + + LL MYGK G + +
Sbjct: 56 PPQEHYGWVLDLVAAKKAVA--QGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVAD 113
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME---NKGVRPDSITFLSVLTV 467
++ +F+ ++ F+W A+I A G + ++ M GV PD T SVL
Sbjct: 114 ARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKA 173
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
G G G + +K + ++ S + ++ M + G L+ A + + G ++
Sbjct: 174 SGVEGDGRCGCEVHGLAVK-HGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVA 232
Query: 528 VLQSLLGACRIHG 540
S++ C +G
Sbjct: 233 SWNSMISGCLQNG 245
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 208/637 (32%), Positives = 353/637 (55%), Gaps = 23/637 (3%)
Query: 3 MYCKSGQFDKALCIFNN--LNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
MY K G A +F+ + D VSWN+++S K +ALS RM +GV +
Sbjct: 189 MYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNT 248
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ AL D G+ +H +K ++VYV NALI MY++ GR+ +A RVF
Sbjct: 249 YTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFAS 308
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSWN +LSG Q+ Y +A+ +M + D VS + +A G NL
Sbjct: 309 MLCRDYVSWNTLLSGLVQNELYR-DALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLN 367
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GK++H +I+ G +++ +GN L+ Y+KC F MH++++ISWTT+I+ +
Sbjct: 368 GKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQ 427
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAIS---IGNLVKEGRMIHGLCIKTNFLSE 289
+A++LF+++++ G+ + + ++ A S N ++E IHG K + L++
Sbjct: 428 NECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIRE---IHGYVFKRD-LAD 483
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ N ++ +Y + + F+ + ++I+SW ++I+ NGL + A++ F+ + +
Sbjct: 484 IMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQ 543
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ +P++ S L+A A SLK G+ H +I+ G + + S+L+DMY G++
Sbjct: 544 TNIQPDSIAIISALSAT--ANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTV 601
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S+++F+ +++ WT++I+A HG + FK+M ++ V PD ITFL++L C
Sbjct: 602 ENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYAC 661
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G++ +G+ F+ M Y +EP P+HY+CMVD+L R LEEA + V +P P V
Sbjct: 662 SHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEV 721
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LLGAC IH N E+GE A L++ + SG Y L+SN++A G W V +R MK
Sbjct: 722 WCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKG 781
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
G++K G SW +V + +H F + D +HP++++IY
Sbjct: 782 NGLKKNPGCSWIEVD--NKIHTFMARDKSHPQTDDIY 816
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 245/468 (52%), Gaps = 25/468 (5%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+S L C+ + G QLH+ ++K L + ++ L+ MY + G L +A +VFDEM
Sbjct: 48 AHSLLLDLCVAVKALPQGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEM 105
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+ +WNA++ + G Y +EAI EM G+ +D +F S ACG LG
Sbjct: 106 TERTIFTWNAMMGAFVSSGKY-LEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLG 164
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR--RMHDRNVISWTTMISMNR 236
+IHGV++K G+G V V N L++ Y KC G A +F M + +SW ++IS +
Sbjct: 165 AEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV 224
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+A+SLF+ M+ GV N TF+ + + + VK G IHG +K+N ++
Sbjct: 225 TEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVY 284
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI MYA+ M+D+E+VF + CR+ +SWN L+SG QN L A+ F + +
Sbjct: 285 VANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSA 344
Query: 352 -KPNAYTFGSVLNAVGAA-EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+ SVLN + A+ +L +G+ H++ I+ GLDS+ +G+ L+DMY K +
Sbjct: 345 QKPDQV---SVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVK 401
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC- 468
F EK +WT II+ A++ + +N F++++ KG+ D + SVL C
Sbjct: 402 HMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461
Query: 469 ---GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
RN + ++F L D ++ + +V++ G VG + A
Sbjct: 462 GLKSRNFIREIHGYVFKRDLADIMLQ------NAIVNVYGEVGHRDYA 503
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 271/551 (49%), Gaps = 17/551 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G A+ +F+ + I +WN ++ F S +A+ M ++GV DA
Sbjct: 86 LHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDA 145
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD- 116
T+ + L C G ++H + VK G V+V NALI MY + G L AR +FD
Sbjct: 146 CTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDG 205
Query: 117 -EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M +D+VSWN+I+S + +G +EA+ M G+ + +F +A +
Sbjct: 206 IMMEKEDTVSWNSIISAHVTEGK-CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFV 264
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
+LG IHG ++K + V V N L++ Y+KC DA +VF M R+ +SW T++S
Sbjct: 265 KLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGL 324
Query: 234 MNRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ E DA++ F++M+ P+ V+ + LI A + G+ +H I+ S
Sbjct: 325 VQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNM 384
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
+ N LI MYA+ ++ F+ + +++ISW +I+GYAQN L A+ F V +K
Sbjct: 385 QIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVK 444
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ GSVL A + S + H ++ K L +D ++ +A++++YG+ G
Sbjct: 445 GMDVDPMMIGSVLRACSGLK--SRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRD 501
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++R F + K +WT++I+ +G + F ++ ++PDSI +S L+
Sbjct: 502 YARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATA 561
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+ KG+ + +++ P S +VDM G +E + ++ + L +
Sbjct: 562 NLSSLKKGKEIHGFLIRKGFFLEGPI-ASSLVDMYACCGTVENSRKMFHSVK-QRDLILW 619
Query: 530 QSLLGACRIHG 540
S++ A +HG
Sbjct: 620 TSMINANGMHG 630
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 218/657 (33%), Positives = 350/657 (53%), Gaps = 19/657 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++ Y SG A +F + + + +W ++ ++ DALS M GV+ D
Sbjct: 81 LSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDR 140
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT +T L+ G LH +KFGLD+ V+V N L+ Y + G L ARRVF E
Sbjct: 141 VTVTTVLNL----PGCTVP-SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLE 195
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +KD+V++NA++ G +++G + +A+ M R G+ H +F+S + +L L
Sbjct: 196 MHDKDAVTYNAMMMGCSKEGLH-TQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLL 254
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G Q+H + ++ +V V N L+ YSKC+ D ++F M +R+ +S+ +I+
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 314
Query: 235 NREDA--VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N+ A + LF+EM+ G + + ++ V G+ IH + SE +
Sbjct: 315 NQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLL 374
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI MY++ + ++ F S + ISW ALI+GY QNG A+Q F + +
Sbjct: 375 GNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGL 434
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ TF S++ A + I L G++ HS++I+ G S GS L+DMY K G + E+
Sbjct: 435 RPDRATFSSIIKASSSLAMIGL--GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEA 492
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
R F+E E++ +W A+ISA A +G+ ++ + F+ M + G PDS+TFLSVL C N
Sbjct: 493 LRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHN 552
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G+ + F M Y I P +HY+C++D LGRVG + ++++ ++P + S
Sbjct: 553 GLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 612
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
+L +CRIHGN E+ AD L MEP + YV++SN+YA G WE A ++K M+ +GV
Sbjct: 613 ILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGV 672
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
RKE G+SW ++ ++ F+S D T P +EI + L EM K + AL
Sbjct: 673 RKESGYSWVEIK--QKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCAL 727
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 231/483 (47%), Gaps = 52/483 (10%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
L + +VK G D Y N + G L AR +FD+MP+K+ S N ILS Y+ GD
Sbjct: 30 LDARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGD 89
Query: 139 YGV------------------------------EAILALIEMMRKGLRLDHVSFTSAASA 168
+A+ M+ +G+ D V+ T+ +
Sbjct: 90 LPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNL 149
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
G +H +IK G THV V N L+ Y K + A +VF MHD++ +++
Sbjct: 150 PGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTY 204
Query: 229 TT-MISMNRE----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
M+ ++E A+ LF MR G+ TF ++ + + G +H L ++
Sbjct: 205 NAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLR 264
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ + V N L+ Y++ + + D ++FDE+ R+ +S+N +I+ YA N + ++
Sbjct: 265 STSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRL 324
Query: 344 F-----FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
F G ++ P + ++L+ G+ D+ + G++ H+ ++ +GL S+ ++G+AL
Sbjct: 325 FREMQKLGFDRQVLP----YATMLSVAGSLPDVHI--GKQIHAQLVLLGLASEDLLGNAL 378
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+DMY K G + ++ F+ EKS +WTA+I+ ++G +E + F +M G+RPD
Sbjct: 379 IDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDR 438
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
TF S++ MI GR L +++ + + S S +VDM + G L+EA
Sbjct: 439 ATFSSIIKASSSLAMIGLGRQLHSYLIRSGY-KSSVFSGSVLVDMYAKCGCLDEALRTFD 497
Query: 519 QIP 521
++P
Sbjct: 498 EMP 500
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 204/632 (32%), Positives = 335/632 (53%), Gaps = 78/632 (12%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG- 137
+H+ ++K G +EV++ N LI Y++ G L + R++FD+MP ++ +WN++++G T+ G
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101
Query: 138 -----------------------------DYGVEAILALIEMMRKGLRLDHVSFTSAASA 168
D EA+ M ++G L+ +F S SA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C ++ G QIH + K + V +G+ L+ YSKC DA +VF M DRNV+SW
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSW 221
Query: 229 TTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
++I+ + +A+ +F+ M V P++VT +I A + + +K G+ +H +K
Sbjct: 222 NSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVK 281
Query: 284 TNFL-SEPSVCNCLITMYARFESMQDSEKVFDELSCREII-------------------- 322
+ L ++ + N + MYA+ ++++ +FD + R +I
Sbjct: 282 MDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARL 341
Query: 323 -----------SWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAED 370
SWNALI+GY QNG + A+ F + +ES P YTF ++L A D
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLAD 401
Query: 371 ISLKHGQRCHSHIIKVGL------DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+ L G + H H++K G + D VG++L+DMY K G + E VF + E+
Sbjct: 402 LHL--GMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+W A+I A++G + F+EM + G +PD IT + VL+ CG G + +GRH F SM
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+D+ + P DHY+CMVD+LGR G LEEA+ ++ ++P P + SLL AC++H N+ +
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITL 579
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
G+ +A+ L ++E + SG YVL+SN+YAE G W +RK M+ +GV K+ G SW +
Sbjct: 580 GKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIP- 638
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
H F D +HPR ++I+ + + L +EM+
Sbjct: 639 -GHAHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 147/555 (26%), Positives = 257/555 (46%), Gaps = 85/555 (15%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYST 62
K G D+A +F ++ D +WN+++SGF + D +AL + M+ G V + T+++
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFAS 157
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
LS C G+Q+HSLI K S+VY+G+AL+ MYS+ G + +A++VFDEM +++
Sbjct: 158 GLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRN 217
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSWN++++ Y Q+G VEA+ M+ + D V+ S SAC +++G+++H
Sbjct: 218 VVSWNSLITCYEQNGP-AVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 183 GVSIKMG-YGTHVSVGNVLMSTYSKCE-------------------------------VT 210
+KM + + N + Y+KC T
Sbjct: 277 ARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAAST 336
Query: 211 GDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHA- 264
A +F +M +RNV+SW +I+ E+A+SLF ++ + VCP TF ++ A
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKAC 396
Query: 265 -----ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
+ +G + HG ++ + V N LI MY + +++ VF ++ R
Sbjct: 397 ADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQR 378
+ +SWNA+I G+AQNG A++ F ++ KP+ T VL+A G
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACG------------ 504
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H+ ++ G R R F + + T ++ L R G
Sbjct: 505 -HAGFVEEG-----------------RHYFSSMTRDFGVAPLRDHY--TCMVDLLGRAGF 544
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS 498
E + +EM V+PDS+ + S+L C + I G+++ + + + P Y
Sbjct: 545 LEEAKSIIEEMP---VQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGP--YV 599
Query: 499 CMVDMLGRVGRLEEA 513
+ +M +G+ +A
Sbjct: 600 LLSNMYAELGKWGDA 614
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 186/380 (48%), Gaps = 53/380 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI----GVVFD 56
++MY K G + A +F+ + + ++VSWN++++ +E++ A+ AL++ + V D
Sbjct: 194 VDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVE-ALKVFQVMLESWVEPD 252
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVF 115
VT ++ +S C G ++H+ +VK L +++ + NA + MY++ R+ EAR +F
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 116 DEMP-------------------------------NKDSVSWNAILSGYTQDGDYGVEAI 144
D MP ++ VSWNA+++GYTQ+G+ EA+
Sbjct: 313 DSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE-NEEAL 371
Query: 145 LALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI------HGVSIKMGYGTHVSVGN 198
+ R+ + H +F + AC +L LG Q HG + G + VGN
Sbjct: 372 SLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGN 431
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMRLDGVCP 253
L+ Y KC + VFR+M +R+ +SW MI + N +A+ LF+EM G P
Sbjct: 432 SLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKP 491
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP--SVCNCLITMYARFESMQDSEK 311
+ +T IG++ A V+EGR + +F P C++ + R +++++
Sbjct: 492 DHITMIGVLSACGHAGFVEEGRHYFS-SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKS 550
Query: 312 VFDELSCR-EIISWNALISG 330
+ +E+ + + + W +L++
Sbjct: 551 IIEEMPVQPDSVIWGSLLAA 570
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 34/279 (12%)
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWN--------- 325
R +H IK+ F +E + N LI YA+ S++D ++FD++ R + +WN
Sbjct: 40 RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL 99
Query: 326 ----------------------ALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVL 362
+++SG+AQ+ A+ F + KE N YTF S L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGL 159
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
+A D + G + HS I K SD +GSAL+DMY K G++ ++Q+VF+E +++
Sbjct: 160 SACSGLND--MNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRN 217
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
+W ++I+ ++G + F+ M V PD +T SV++ C I G+ +
Sbjct: 218 VVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHA 277
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
++K + + VDM + R++EA + +P
Sbjct: 278 RVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 49/207 (23%)
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
S P A S + +A D+ RC H+ +IK G ++ + + L+D Y K GS+
Sbjct: 19 SSPFAKLLDSCIKLKLSAIDV------RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLE 72
Query: 410 ESQRVFNETQEKSEFAWTAIISAL-------------------------------ARHGD 438
+ +++F++ +++ F W ++++ L A+H
Sbjct: 73 DGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDR 132
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP---D 495
E + F M +G + TF S L+ C +++G + + K SP D
Sbjct: 133 CEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAK------SPCLSD 186
Query: 496 HY--SCMVDMLGRVGRLEEAEELVGQI 520
Y S +VDM + G + +A+++ ++
Sbjct: 187 VYIGSALVDMYSKCGNVNDAQQVFDEM 213
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 211/631 (33%), Positives = 346/631 (54%), Gaps = 23/631 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEK--SDDALSFALR-MNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + D SWN++L+ + A LR M+ G+ + +AL
Sbjct: 57 LFDEIPRLDAASWNSLLAAHVSIGAHPAACRLLRAMHERGLAANTFALGSALRSAAAMGC 116
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G QLHSL VK GL V+ AL+ MY++ GR +A R+FD MP +++VSWNA+++G
Sbjct: 117 SALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAG 176
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Y + G A+ +EM R+G D +F + + ++ L Q+HG +K G
Sbjct: 177 YVESGKVA-PAVQLFVEMEREGFLPDEATFAALLTVV-NDSTCFLMHQLHGKIVKYGSAL 234
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMIS------MNREDAVSLFKE 245
+ V N ++ YS+C ++ ++F + DR ++ISW M+ M E
Sbjct: 235 GLIVLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASM 294
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
MR GV P+ +F +I A + + G +IHGL K F VCN LI MY RF
Sbjct: 295 MRASGVQPDMYSFTSIISACA-EHRDHGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSE 353
Query: 306 ---MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSV 361
M+D+ K FD L ++ +SWN++++GY+Q+GLS A++ F + E+ + Y F +
Sbjct: 354 NCMMEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAA 413
Query: 362 LNAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
L + D++L + G++ H +I+ G S+ V S+L+ MY K G + ++ + F E +
Sbjct: 414 LRSC---SDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADK 470
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
S W +++ A+HG ++V + F +M V D ITF+ ++T C G++ +G +
Sbjct: 471 SSSVPWNSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEI 530
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
++M Y I +HY+C +D+ GR G+L++A+EL+ +P P V +LLGACR+HG
Sbjct: 531 LNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRVHG 590
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
N+E+ +A L++ EP +YVL+SN+Y+ G W AI++K MK+KG+ K G+SW
Sbjct: 591 NMELASDVASHLLEAEPRQHSTYVLLSNMYSGLGMWSDRAIVQKEMKNKGLSKVPGWSWI 650
Query: 601 DVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
+V + +H F++ D +HPR +EIY M L
Sbjct: 651 EVK--NEVHSFNAEDGSHPRMDEIYEMLSLL 679
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 230/455 (50%), Gaps = 19/455 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K G+ A +F+ + + VSWN +++G+ +S A+ + M G + D
Sbjct: 143 LHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDE 202
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L+ D FL QLH IVK+G + V NA IT YS+ G L +RR+FDE
Sbjct: 203 ATFAALLTVVNDSTCFLMH-QLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDE 261
Query: 118 MPNK-DSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNL 175
+ ++ D +SWNA+L Y G EA+ MMR G++ D SFTS SAC ++
Sbjct: 262 IGDRSDLISWNAMLGAYATHG-MEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRD- 319
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE---VTGDANKVFRRMHDRNVISWTTMI 232
G IHG+ K G+ V N L++ Y++ + DA K F + ++ +SW +M+
Sbjct: 320 HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSML 379
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + DA+ F+ M+ + + ++ F + + S L++ GR IHGL I++ F
Sbjct: 380 TGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFA 439
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S V + LI MY++ + D+ K F+E + WN+++ GYAQ+G + A F +
Sbjct: 440 SNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQM 499
Query: 348 IKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++ P + TF ++ A A + + + ++ + G+ + +D+YG+ G
Sbjct: 500 LELKVPLDHITFVGLITACSHAGLVD-EGSEILNTMESRYGIPLRMEHYACGIDLYGRAG 558
Query: 407 SIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ +++ + + E W ++ A HG+ E
Sbjct: 559 QLDKAKELIDSMPFEPDAMVWMTLLGACRVHGNME 593
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 206/413 (49%), Gaps = 18/413 (4%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGR-LVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
H+ ++K G+ S N L+T YS L ARR+FDE+P D+ SWN++L+ + G
Sbjct: 23 HATLLKSGVTSPT-PWNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGA 81
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+ L L M +GL + + SA + LG Q+H +++K G +V
Sbjct: 82 HPAACRL-LRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSAT 140
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCP 253
L+ Y+KC T DA ++F M +RN +SW +++ E AV LF EM +G P
Sbjct: 141 ALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLP 200
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
++ TF L+ ++ + +HG +K V N IT Y++ ++ +S ++F
Sbjct: 201 DEATFAALLTVVNDSTCFLMHQ-LHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIF 259
Query: 314 DELSCR-EIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAED 370
DE+ R ++ISWNA++ YA +G+ A++ F +++ S +P+ Y+F S+++A D
Sbjct: 260 DEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRD 319
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS---IFESQRVFNETQEKSEFAWT 427
G H + K G + V +AL+ MY + + ++ + F+ K +W
Sbjct: 320 ---HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWN 376
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
++++ ++HG + F+ M+++ + D F + L C ++ GR +
Sbjct: 377 SMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQI 429
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 217/655 (33%), Positives = 353/655 (53%), Gaps = 17/655 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+N+Y K G A +F+ +IV WN +L+GF E ++A+ M + D
Sbjct: 377 INLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDE 436
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L C F G Q+H + +K +D ++V NA + MYS++G + +A+ +F
Sbjct: 437 FTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSL 496
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P KDS+SWNA+ G Q+ + EA+ L M G+ D VSF++A +AC + + E
Sbjct: 497 IPYKDSISWNALTVGLAQNLEEE-EAVCMLKRMRLHGITPDDVSFSTAINACSNIRATET 555
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQIH ++IK G ++ +VG+ L+ YSK + K+F ++ +++ +I+
Sbjct: 556 GKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQ 615
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++A+ LF+++ DG+ P+ VTF ++ S G+ +H +K+ L + ++
Sbjct: 616 NNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTL 675
Query: 293 CNC-LITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIK- 349
L +Y + + ++D+ K+ E+ + + W A+ISGYAQNG ++ +F+ +
Sbjct: 676 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC 735
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ + TF SVL A ++ + G+ H I K G S SAL+DMY K G +
Sbjct: 736 NVRSDEATFASVLKAC--SDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVI 793
Query: 410 ESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S F E + K + W ++I A++G + + F++ME ++PD +TFL VL C
Sbjct: 794 SSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIAC 853
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G+I +GRH F SM K Y + P DHY+C +D+LGR G L+EA+E + Q+P P V
Sbjct: 854 THSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVV 913
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+ L ACR+H + E G+ A L+++EP S +YVL+S+L+A G+W + R+ M+
Sbjct: 914 WATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMRE 973
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
KGV K G SW VG+ L F D HP + IY M L MK N E
Sbjct: 974 KGVAKFPGCSWITVGNKTSL--FLVQDKYHPDNLRIYEMLGDLTGMMKKDNDIDE 1026
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/479 (33%), Positives = 257/479 (53%), Gaps = 26/479 (5%)
Query: 7 SGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDA--------- 57
SG+ D A + + P V+WN V+SG +S L N++G+ D
Sbjct: 282 SGRLDHATALLKKMPTPSTVAWNAVISGHAQS------GLEFNVLGLYKDMRSWGLWPTR 335
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ LS + + F+ G Q+H+ V GLD+ V+VG++LI +Y++ G +A+ VFD
Sbjct: 336 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 395
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
K+ V WNA+L+G+ Q+ + EAI MMR L+ D +F S AC + + L
Sbjct: 396 SCEKNIVMWNAMLTGFVQN-ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 454
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GKQ+H V+IK + V N + YSK GDA +F + ++ ISW +
Sbjct: 455 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 514
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++ E+AV + K MRL G+ P+DV+F I+A S + G+ IH L IK S +V
Sbjct: 515 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 574
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LI +Y++ ++ S K+F ++ I+ NALI+G+ QN A+Q F V+K+
Sbjct: 575 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 634
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFE 410
KP++ TF S+L+ G + ++ G++ H + +K G L D ++G +L +Y K + +
Sbjct: 635 KPSSVTFSSILS--GCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLED 692
Query: 411 SQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ ++ E + K+ F WTAIIS A++G + + F M + VR D TF SVL C
Sbjct: 693 ANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKAC 751
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 239/494 (48%), Gaps = 53/494 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G A +F+ + PD + W+++++ + + +AL+ RM+ +G D
Sbjct: 210 VDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQ 269
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT T +I+ + GRL A + +
Sbjct: 270 VTLVT-----------------------------------IISTLASSGRLDHATALLKK 294
Query: 118 MPNKDSVSWNAILSGYTQDG-DYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNL 175
MP +V+WNA++SG+ Q G ++ V L L + MR GL +F S SA + K
Sbjct: 295 MPTPSTVAWNAVISGHAQSGLEFNV---LGLYKDMRSWGLWPTRSTFASMLSAAANMKAF 351
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
G+Q+H ++ G +V VG+ L++ Y+KC DA VF ++N++ W M++
Sbjct: 352 VEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGF 411
Query: 234 -MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
N E+A+ +F+ M + ++ TF+ ++ A + + G+ +H + IK
Sbjct: 412 VQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISL 471
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
V N + MY+++ ++ D++ +F + ++ ISWNAL G AQN AV + +
Sbjct: 472 FVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLH 531
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ +F + +NA + + G++ H IK G+ S+ VGS+L+D+Y K G +
Sbjct: 532 GITPDDVSFSTAINACSNIR--ATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVE 589
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC- 468
S+++F + S A+I+ ++ + + + F+++ G++P S+TF S+L+ C
Sbjct: 590 SSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 649
Query: 469 -GRNGMIHKGRHLF 481
N I K H +
Sbjct: 650 GSLNSAIGKQVHCY 663
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/531 (24%), Positives = 241/531 (45%), Gaps = 51/531 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DAL-SFALRMNLIGVVFD 56
+ +YCKSG+ A + +++LS +S D L +F G D
Sbjct: 108 VELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPD 167
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ LS C +G Q+H +VK G S V+ AL+ MY++ G + ARRVFD
Sbjct: 168 QFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFD 227
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ D++ W+++++ Y + G Y EA+ M + G D V+ +
Sbjct: 228 GIACPDTICWSSMIACYHRVGCYQ-EALALFSRMDKMGSAPDQVTLVT------------ 274
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
++ST + A + ++M + ++W +IS +
Sbjct: 275 -----------------------IISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHA 311
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + + L+K+MR G+ P TF ++ A + EG+ +H + +
Sbjct: 312 QSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVF 371
Query: 292 VCNCLITMYARFESMQDSEKVFDELSC-REIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + LI +YA+ D++ VFD LSC + I+ WNA+++G+ QN L A++ F +++
Sbjct: 372 VGSSLINLYAKCGCPSDAKNVFD-LSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRY 430
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ + + +TF S+L A L G++ H IK +D V +A LDMY K G+I
Sbjct: 431 TLQTDEFTFVSILGACTYLSSFYL--GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIG 488
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++ +F+ K +W A+ LA++ + E + K M G+ PD ++F + + C
Sbjct: 489 DAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACS 548
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
G+ + +K Y I + S ++D+ + G +E + ++ Q+
Sbjct: 549 NIRATETGKQIHCLAIK-YGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV 598
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 207/455 (45%), Gaps = 56/455 (12%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH I++ G +G++L+ +Y + GR+ A + S + +++LS + + G
Sbjct: 88 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 147
Query: 139 YGVEAILALIEMMR--KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G +L +R G R D SAC L G+Q+H +K G+ + V
Sbjct: 148 PG--DVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 205
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGV 251
L+ Y+KC +A +VF + + I W++MI+ ++A++LF M G
Sbjct: 206 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 265
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ VT + + I L GR+ H +
Sbjct: 266 APDQVTLVTI-----ISTLASSGRLDH------------------------------ATA 290
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-----PNAYTFGSVLNAVG 366
+ ++ ++WNA+ISG+AQ+GL + G+ K+ + P TF S+L+A
Sbjct: 291 LLKKMPTPSTVAWNAVISGHAQSGLEFNVL----GLYKDMRSWGLWPTRSTFASMLSA-- 344
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
AA + GQ+ H+ + GLD++ VGS+L+++Y K G +++ VF+ + EK+ W
Sbjct: 345 AANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMW 404
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
A+++ ++ E + F+ M ++ D TF+S+L C + G+ + +K
Sbjct: 405 NAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 464
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ ++ S + +DM + G + +A+ L IP
Sbjct: 465 NC-MDISLFVANATLDMYSKYGAIGDAKALFSLIP 498
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 124/308 (40%), Gaps = 42/308 (13%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
+ +HG ++ G +G+ L+ Y K G A +R + ++++S +
Sbjct: 86 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145
Query: 238 ----DAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
D + F+ +R G P+ ++ A S ++ GR +H +K+ F S
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 205
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
L+ MYA+ + ++ +VFD ++C + I W+++I+ Y + G A+ F
Sbjct: 206 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALF-------- 257
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
S + K+G D + ++ G + +
Sbjct: 258 ----------------------------SRMDKMGSAPDQVTLVTIISTLASSGRLDHAT 289
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+ + S AW A+IS A+ G +V+ +K+M + G+ P TF S+L+
Sbjct: 290 ALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 349
Query: 473 MIHKGRHL 480
+G+ +
Sbjct: 350 AFVEGQQM 357
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Query: 374 KHGQRC---HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+H Q C H I++ G +G +L+++Y K G + + E++ A ++++
Sbjct: 80 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 139
Query: 431 SALARHGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
S AR G V+ F+ + G RPD VL+ C R G++ GR + ++K
Sbjct: 140 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS-G 198
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
S + +VDM + G + A + I
Sbjct: 199 FSSSVFCEAALVDMYAKCGDVPNARRVFDGI 229
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 219/649 (33%), Positives = 349/649 (53%), Gaps = 81/649 (12%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
Y+ LS E + G LH +I++ Y+ N L+T Y + GR ARRVFD M
Sbjct: 9 YAALLSAAARTEPHVAG-ALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVFDAM 67
Query: 119 PN-------------------------------KDSVSWNAILSGYTQDGDYG--VEAIL 145
P+ +D VS+NA+++G++ G + V L
Sbjct: 68 PHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYL 127
Query: 146 ALIEMMR--KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
AL++ + R+ + AASA G + LGKQ H +++G+G + VG+ L+
Sbjct: 128 ALLQADSSVRPSRITMSTMVMAASALG---DRALGKQFHCQILRLGFGANAFVGSPLVDM 184
Query: 204 YSKCEVTGDANKVF---------------------------RR----MHDRNVISWTTMI 232
Y+K + GDA + F RR M DR+ I+WTTM+
Sbjct: 185 YAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMV 244
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + +A+ +F+ MR G+ + TF ++ A + +++G+ IH I+T +
Sbjct: 245 TGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYD 304
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
V + L+ MY++ S++ +E VF ++C+ IISW ALI GY QNG S AV+ F +
Sbjct: 305 DNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEM 364
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++ P+ YT GSV+++ A SL+ G + H + GL V +AL+ +YGK G
Sbjct: 365 QRDGIDPDDYTLGSVISS--CANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
SI ++ R+F+E + +WTA++S A+ G + ++ F++M KGV+PD +TF+ VL+
Sbjct: 423 SIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLS 482
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C R G + KGR F SM KD+ I P DHY+CM+D+ R G+L+EAEE + Q+P P
Sbjct: 483 ACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDA 542
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
+LL ACR+ G++E+G+ A+ L++++P SYVL+ +++A KG W VA LR+GM
Sbjct: 543 IGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGM 602
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
+ + V+KE G SW + + +H FS+ D +HP S+ IY E L S+M
Sbjct: 603 RDRQVKKEPGCSW--IKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKM 649
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 173/330 (52%), Gaps = 11/330 (3%)
Query: 11 DKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFC 67
++A +F + + D ++W T+++GF ++ +AL RM G+ D T+ + L+ C
Sbjct: 223 EEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTAC 282
Query: 68 LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN 127
G Q+H+ I++ D V+VG+AL+ MYS+ + A VF M K+ +SW
Sbjct: 283 GALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWT 342
Query: 128 AILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
A++ GY Q+G EA+ EM R G+ D + S S+C + +LE G Q H +++
Sbjct: 343 ALIVGYGQNG-CSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALV 401
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSL 242
G +++V N L++ Y KC DA+++F M + +SWT ++S ++ + L
Sbjct: 402 SGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDL 461
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR-MIHGLCIKTNFLSEPSVCNCLITMYA 301
F++M GV P+ VTFIG++ A S V++GR H + + C+I +Y+
Sbjct: 462 FEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYS 521
Query: 302 RFESMQDSEKVFDELSCR-EIISWNALISG 330
R ++++E+ ++ + I W L+S
Sbjct: 522 RSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 6/241 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K A +F + +I+SW ++ G+ + S++A+ M G+ D
Sbjct: 314 VDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDD 373
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + +S C + G Q H L + GL + V NAL+T+Y + G + +A R+FDE
Sbjct: 374 YTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDE 433
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D VSW A++SGY Q G E I +M+ KG++ D V+F SAC +E
Sbjct: 434 MSFHDQVSWTALVSGYAQFGR-AKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEK 492
Query: 178 GKQ-IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMISMN 235
G+ H + G ++ YS+ +A + ++M + I W T++S
Sbjct: 493 GRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSAC 552
Query: 236 R 236
R
Sbjct: 553 R 553
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 214/614 (34%), Positives = 332/614 (54%), Gaps = 15/614 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVF-DAVT 59
Y G A +F+ L NP + SWN ++ + S DAL ++M G + D T
Sbjct: 66 YAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYT 125
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y + C D+ G +H+ V G DS+ +V N+L+ MY G + ARRVFD M
Sbjct: 126 YPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMR 185
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ VSWN +++GY ++G EA++ M+ KG+ D + S C + K LE+G+
Sbjct: 186 ERTLVSWNTMINGYFKNGCVK-EALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGR 244
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM-----ISM 234
++H + G +SV N L+ Y+KC +A +F M R+V+SWTTM ++
Sbjct: 245 RVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNG 304
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+ A+ L + M+ + V PN VT ++ A + +K GR +HG I+ SE V
Sbjct: 305 DARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVET 364
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI MYA+ ++ S +VF + S + WNA+ISG NGLS A++ F ++ E+ P
Sbjct: 365 ALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDP 424
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N T S+L A D L+ + H ++I+ G S V + L+D+Y K GS+ +
Sbjct: 425 NDATLNSLLPAYAFLTD--LQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHN 482
Query: 414 VFN--ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+FN ++K W+AII+ HG E+ ++ F +M GV+P+ ITF S+L C
Sbjct: 483 IFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHA 542
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G LF ML+D + DHY+C++D+LGR GRLEEA EL+ + P +V +
Sbjct: 543 GLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGA 602
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLG+C IH NVE+GE A L ++EP +G+YVL++N+Y+ G W +R M + G+
Sbjct: 603 LLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGL 662
Query: 592 RKEVGFSWADVGDI 605
RK S +V +I
Sbjct: 663 RKTPAHSLIEVRNI 676
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 250/506 (49%), Gaps = 15/506 (2%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVY---VGNALITMYSRWGRLVEARRVFD 116
Y + L C + Q+H+ + GL S Y + ++L Y+ G AR++FD
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFD 80
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL-DHVSFTSAASACGHEKNL 175
E+ N SWNA++ YT G +A+ ++M+ G R D+ ++ ACG
Sbjct: 81 ELRNPSLFSWNAMIRMYTNSG-LSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLP 139
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E+G IH ++ G+ + V N LM+ Y C A +VF M +R ++SW TMI+
Sbjct: 140 EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGY 199
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++A+ +F M G+ P+ T + ++ S ++ GR +H L N +
Sbjct: 200 FKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDI 259
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
SV N L+ MYA+ +M +++ +F E+ R+++SW +++GY NG + +A+ + E
Sbjct: 260 SVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
S KPN T SVL+A A SLKHG+ H I+ L+S+ IV +AL+DMY K ++
Sbjct: 320 SVKPNFVTLASVLSA--CASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVN 377
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
S RVF++ ++ W AIIS +G + FK+M + V P+ T S+L
Sbjct: 378 LSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYA 437
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP-GGPGLSV 528
+ + R++ +++ + + + ++D+ + G LE A + IP +
Sbjct: 438 FLTDLQQARNMHGYLIRSGFLS-RIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIIT 496
Query: 529 LQSLLGACRIHGNVEMGERIADALMK 554
+++ +HG+ E + D +++
Sbjct: 497 WSAIIAGYGMHGHGETAISLFDQMVQ 522
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 261/531 (49%), Gaps = 57/531 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M MY G+ + A +F+ + +VSWNT+++G+ K+ +AL M G+ D
Sbjct: 165 MAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDC 224
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C + G ++H+L+ L ++ V N+L+ MY++ G + EA+ +F E
Sbjct: 225 ATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYE 284
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M +D VSW +++GY +GD + L L +MM+ + ++ + V+ S SAC +L+
Sbjct: 285 MDKRDVVSWTTMMNGYILNGD--ARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLK 342
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+ +HG +I+ + V V L+ Y+KC + +VF + + W +IS
Sbjct: 343 HGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCI 402
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++R+ A+ LFK+M ++ V PND T L+ A + +++ R +HG I++ FLS
Sbjct: 403 HNGLSRK-AIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRI 461
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVI 348
V LI +Y++ S++ + +F+ + ++II+W+A+I+GY +G A+ F ++
Sbjct: 462 EVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMV 521
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ KPN TF S+L+A H+ ++ GL
Sbjct: 522 QSGVKPNEITFTSILHACS-------------HAGLVDEGL------------------G 550
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+F+ N+ +++ +T +I L R G E + M RP+ + ++L
Sbjct: 551 LFKFMLEDNQMSLRTDH-YTCVIDLLGRAGRLEEAYELIRTM---AFRPNHAVWGALLGS 606
Query: 468 CGRNGMIHKGRHLFDSMLK-DYHIEP-SPDHYSCMVDMLGRVGRLEEAEEL 516
C +IH+ L + K + +EP + +Y + ++ VGR +AE +
Sbjct: 607 C----VIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHV 653
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 210/639 (32%), Positives = 341/639 (53%), Gaps = 22/639 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVL------SGFEKSDDALSFALRMNLIGVVFD 56
MY K G + A+ +F + N ++VSWN+V+ GF + L G+V D
Sbjct: 239 MYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPD 298
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T T + C G+ +H L K G+ EV V N+L+ MYS+ G L EAR +FD
Sbjct: 299 VATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFD 358
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKN 174
K+ VSWN I+ GY+++GD+ + L++ M++ +R++ V+ + AC E
Sbjct: 359 MNGGKNVVSWNTIIWGYSKEGDF--RGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQ 416
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L K+IHG + + G+ V N ++ Y+KC A +VF M + V SW +I
Sbjct: 417 LLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGA 476
Query: 235 NRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ ++ ++ LF M G+ P+ T L+ A + ++ G+ IHG ++ +
Sbjct: 477 HAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELD 536
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ L+++Y + SM + +FD++ + ++ WN +I+G++QN L A+ F ++
Sbjct: 537 EFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLS 596
Query: 350 ES-KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
KP VL GA +S L+ G+ HS +K L D V AL+DMY K G
Sbjct: 597 GGIKPQEIAVTGVL---GACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGC 653
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +SQ +F+ EK E W II+ HG + F+ M+NKG RPDS TFL VL
Sbjct: 654 MEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIA 713
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ +G M Y ++P +HY+C+VDMLGR G+L EA +LV ++P P
Sbjct: 714 CNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSG 773
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+ SLL +CR +G++E+GE ++ L+++EP + +YVL+SNLYA G W+ V +R+ MK
Sbjct: 774 IWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMK 833
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
G+ K+ G SW ++G + ++ F D + S++I +
Sbjct: 834 ENGLHKDAGCSWIEIGGM--VYRFLVSDGSLSESKKIQQ 870
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/531 (26%), Positives = 264/531 (49%), Gaps = 16/531 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALR-MNLIGVVFDAV 58
MY G + +F+ D+ +N +LSG+ ++ DA+S L ++ + D
Sbjct: 137 MYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNF 196
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T C G +H+L +K G S+ +VGNALI MY + G + A +VF+ M
Sbjct: 197 TLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETM 256
Query: 119 PNKDSVSWNAILSGYTQDGDYG--VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
N++ VSWN+++ +++G +G L+ +GL D + + AC +
Sbjct: 257 RNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVR 316
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMN 235
+G +HG++ K+G V+V N L+ YSKC G+A +F +NV+SW T+I +
Sbjct: 317 MGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYS 376
Query: 236 RE----DAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+E L +EM R + V N+VT + ++ A S + + + IHG + FL +
Sbjct: 377 KEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDE 436
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N + YA+ S+ +E+VF + + + SWNALI +AQNG ++ F ++
Sbjct: 437 LVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDS 496
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ +T GS+L + A L+ G+ H +++ GL+ D +G +L+ +Y + S+
Sbjct: 497 GMDPDRFTIGSLL--LACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSML 554
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ +F++ + KS W +I+ +++ ++ F++M + G++P I VL C
Sbjct: 555 LGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACS 614
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ + G+ + LK H+ ++DM + G +E+++ + ++
Sbjct: 615 QVSALRLGKEVHSFALK-AHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRV 664
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 222/437 (50%), Gaps = 17/437 (3%)
Query: 64 LSFCLDHEGFLFGLQLHSLI-VKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
L C H+ G ++H+L+ L ++V + +I MYS G ++R VFD KD
Sbjct: 99 LRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKD 158
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQI 181
+NA+LSGY+++ + +AI +E++ L D+ + A AC ++ELG+ +
Sbjct: 159 LFLYNALLSGYSRNALFR-DAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE---- 237
H +++K G + VGN L++ Y KC A KVF M +RN++SW +++ E
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277
Query: 238 -DAVSLFKEMRL---DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ +FK + + +G+ P+ T + +I A + V+ G ++HGL K E +V
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVN 337
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK- 352
N L+ MY++ + ++ +FD + ++SWN +I GY++ G + + +E K
Sbjct: 338 NSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKV 397
Query: 353 -PNAYTFGSVLNAV-GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
N T +VL A G + +SLK H + + G D +V +A + Y K S+
Sbjct: 398 RVNEVTVLNVLPACSGEHQLLSLK---EIHGYAFRHGFLKDELVANAFVAAYAKCSSLDC 454
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++RVF + K+ +W A+I A A++G ++ F M + G+ PD T S+L C R
Sbjct: 455 AERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACAR 514
Query: 471 NGMIHKGRHLFDSMLKD 487
+ G+ + ML++
Sbjct: 515 LKFLRCGKEIHGFMLRN 531
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 226/455 (49%), Gaps = 21/455 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS-FALRMNLI---GVVFD 56
++MY K G +A +F+ ++VSWNT++ G+ K D F L + V +
Sbjct: 341 VDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVN 400
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT L C L ++H + G + V NA + Y++ L A RVF
Sbjct: 401 EVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFC 460
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M K SWNA++ + Q+G G L L+ MM G+ D + S AC K L
Sbjct: 461 GMEGKTVSSWNALIGAHAQNGFPGKSLDLFLV-MMDSGMDPDRFTIGSLLLACARLKFLR 519
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
GK+IHG ++ G +G LMS Y +C +F +M +++++ W MI+
Sbjct: 520 CGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFS 579
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +A+ F++M G+ P ++ G++ A S + ++ G+ +H +K + LSE +
Sbjct: 580 QNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAH-LSEDA 638
Query: 292 VCNC-LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-FGVIK 349
C LI MYA+ M+ S+ +FD ++ ++ WN +I+GY +G L A++ F K
Sbjct: 639 FVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNK 698
Query: 350 ESKPNAYTFGSVLNAVGAAEDIS--LKH-GQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+P+++TF VL A A ++ LK+ GQ + + +K L+ V +DM G+ G
Sbjct: 699 GGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACV----VDMLGRAG 754
Query: 407 SIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ E+ ++ NE ++ + W++++S+ +GD E
Sbjct: 755 QLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLE 789
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 213/647 (32%), Positives = 357/647 (55%), Gaps = 20/647 (3%)
Query: 13 ALCIFNNLNNPDIVSWNTVLSGFEKSDD-----ALSFALRMNLIGVVFDAVTYSTALSFC 67
A +F ++ PDI +N ++ GF +D +L LR N + D TY+ A++ C
Sbjct: 63 ARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRN-TNLSPDNFTYAFAVAAC 121
Query: 68 LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN 127
++ L L HS+I +G S V+VG+AL+ +Y ++ R+V AR+VFD MP +D+V WN
Sbjct: 122 -SNDKHLMLLHAHSIIDGYG--SNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWN 178
Query: 128 AILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
+++G ++ + ++I EM+ G+R+D + T+ A + L++G I +++K
Sbjct: 179 TMINGLVKNCCFD-DSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALK 237
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSL 242
+G+G V L+S YSKC A +FRR++ ++I++ MIS E +V L
Sbjct: 238 IGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKL 297
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
F+E+ G + T +GLI S + IHG C+K+ + P+V +Y +
Sbjct: 298 FRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNK 357
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSV 361
+ + +FDE + +++WNA+ISGY QNG + A+ F ++K E PNA T ++
Sbjct: 358 LNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTI 417
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L+A A+ SL G+ H I L+ + V +AL+DMY K G+I E+ ++F+ EK
Sbjct: 418 LSA--CAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEK 475
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+ W +I HG + + EM + G P ++TFLSVL C G++ +G +F
Sbjct: 476 NTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIF 535
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+M+ Y IEP +HY+CMVD+LGR G+LE+A E + ++P PG +V +LLGAC IH +
Sbjct: 536 HNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKD 595
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
++ ++ L +++P G YVL+SN+Y+ + ++ A +R+ +K + + K G + +
Sbjct: 596 TDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIE 655
Query: 602 VGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
V H F SGD +H + +IY E L +M+ + + E AL
Sbjct: 656 VNGTP--HVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPAL 700
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 216/460 (46%), Gaps = 36/460 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++YCK + A +F+ + D V WNT+++G K+ DD++ M GV D+
Sbjct: 150 VDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDS 209
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L + + G+ + L +K G YV LI++YS+ G + AR +F
Sbjct: 210 STVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRR 269
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDH---VSFTSAASACGHEK 173
+ D +++NA++SG+T +G G E + L E++ G R+ V S GH
Sbjct: 270 INRPDLIAYNAMISGFTANG--GTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGH-- 325
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L L IHG +K G + +V + Y+K A +F ++ V++W MIS
Sbjct: 326 -LHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMIS 384
Query: 234 -----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ E A+SLFKEM PN VT ++ A + + G+ +H L N
Sbjct: 385 GYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEP 444
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
V L+ MYA+ ++ ++ ++FD +S + ++WN +I GY +G A++ + ++
Sbjct: 445 NIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEML 504
Query: 349 KES-KPNAYTFGSVLNA------VGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALL 399
P+A TF SVL A VG E+I H+ + K + +P++ + ++
Sbjct: 505 HLGYNPSAVTFLSVLYACSHAGLVGEGEEI-------FHNMVNKYRI--EPLIEHYACMV 555
Query: 400 DMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGD 438
D+ G+ G + ++ + E W ++ A H D
Sbjct: 556 DILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKD 595
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 216/650 (33%), Positives = 353/650 (54%), Gaps = 21/650 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFALRMNLIG---VVFDAV 58
MY K G D+A+ +F+ + ++VSWN+++ F E SF L M ++G ++ D V
Sbjct: 190 MYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVV 249
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T T L C G+ +H L VK GL EV V NA++ MYS+ G L EA+ F +
Sbjct: 250 TVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKN 309
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG--LRLDHVSFTSAASACGHEKNLE 176
NK+ VSWN ++S ++ +GD EA L EM +G ++ + V+ + AC + L
Sbjct: 310 NNKNVVSWNTMISAFSLEGDVN-EAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLR 368
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
K++HG S + + HV + N + Y+KC A KVF + D+ V SW +I +
Sbjct: 369 SLKELHGYSFRHCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHA 427
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ A+ L +M G P+ T L+ A + ++ G+ IHG ++ ++
Sbjct: 428 QNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFF 487
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L++ Y + +FD + + ++SWNA+ISGY+QNGL ++ F + E
Sbjct: 488 VGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEG 547
Query: 352 KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ ++++ GA +S L+ G+ H +++K D VG +++DMY K G I E
Sbjct: 548 IQSHEI--AIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKE 605
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S++VF+ ++K+ +W AII A HG + + ++ M+ G PD T++ +L CG
Sbjct: 606 SRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGH 665
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G F M IEP +HY+C++DML R GRL++A LV ++P +
Sbjct: 666 AGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWS 725
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLL +CR G +E+GE++A L+++EP + +YVL+SNLYA G W+ V +R+ MK G
Sbjct: 726 SLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIG 785
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEE---IYRMAECLGSEMKY 637
++K+ G SW +VG ++ F GD+ P+S E I+R E SE+ Y
Sbjct: 786 LQKDAGCSWIEVG--GRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGY 833
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 156/573 (27%), Positives = 302/573 (52%), Gaps = 39/573 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAV-- 58
+ MY G + +F+N+ +++ WN ++SG+ ++ L +++ V D V
Sbjct: 86 IKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRN------GLYGDVVKVFMDLVSD 139
Query: 59 --------TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
T+ + + C G +H +++K GL +V+VGNAL+ MY + G + E
Sbjct: 140 TDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDE 199
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASAC 169
A +VFD MP + VSWN+++ ++++G + ++ L+EM+ +GL D V+ + C
Sbjct: 200 AMKVFDFMPETNLVSWNSMICAFSENG-FSRDSFDLLMEMLGEEGLLPDVVTVVTILPVC 258
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
E +++G IHG+++K+G V V N ++ YSKC +A F + +++NV+SW
Sbjct: 259 AGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWN 318
Query: 230 TMISM-----NREDAVSLFKEMRLDG--VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
TMIS + +A +L +EM++ G + N+VT + ++ A ++ + +HG
Sbjct: 319 TMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSF 378
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
+ F + N I YA+ ++ +EKVF + + + SWNALI G+AQNG A+
Sbjct: 379 RHCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALH 437
Query: 343 AFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F + +P+ +T S+L + A SL++G+ H ++++ GL++D VG++LL
Sbjct: 438 LLFQMTYSGQQPDWFTISSLL--LACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSH 495
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG-DYESVMNQFKEMENKGVRPDSIT 460
Y G ++ +F+ ++K+ +W A+IS +++G YES + F++ ++G++ I
Sbjct: 496 YIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYES-LALFRKSLSEGIQSHEIA 554
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC-MVDMLGRVGRLEEAEELVGQ 519
+SV C + + G+ +LK E + C ++DM + G ++E+ ++
Sbjct: 555 IVSVFGACSQLSALRLGKEAHGYVLKALQTEDA--FVGCSIIDMYAKSGCIKESRKVFDG 612
Query: 520 IPGGPGLSVLQSLLGACRIHGN----VEMGERI 548
+ ++ +++ A IHG+ +E+ ER+
Sbjct: 613 LK-DKNVASWNAIIVAHGIHGHGKEAIELYERM 644
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 217/440 (49%), Gaps = 25/440 (5%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNA-LITMYSRWGRLVEARRVFDEMPNKD 122
L C + + G +LH + YV N LI MY+ G +++R VFD M K+
Sbjct: 50 LQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKN 109
Query: 123 SVSWNAILSGYTQDGDYG--VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+ WNA++SGYT++G YG V+ + L+ + D+ +F S ACG ++ LG+
Sbjct: 110 LIQWNALVSGYTRNGLYGDVVKVFMDLVS--DTDFQPDNFTFPSVIKACGGILDVRLGEV 167
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE--- 237
IHG+ IKMG V VGN L+ Y KC +A KVF M + N++SW +MI E
Sbjct: 168 IHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGF 227
Query: 238 --DAVSLFKEMR-LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
D+ L EM +G+ P+ VT + ++ + V G IHGL +K E V N
Sbjct: 228 SRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNN 287
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK----- 349
++ MY++ + +++ F + + + ++SWN +IS ++ G V F +++
Sbjct: 288 AMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEG----DVNEAFNLLQEMQIQ 343
Query: 350 --ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
E K N T +VL A + + L+ + H + + + +A + Y K G+
Sbjct: 344 GEEMKANEVTILNVLPA--CLDKLQLRSLKELHGYSFRHCFQHVEL-SNAFILAYAKCGA 400
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +++VF+ +K+ +W A+I A++GD ++ +M G +PD T S+L
Sbjct: 401 LNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLA 460
Query: 468 CGRNGMIHKGRHLFDSMLKD 487
C + G+ + +L++
Sbjct: 461 CAHLKSLQYGKEIHGYVLRN 480
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 213/634 (33%), Positives = 347/634 (54%), Gaps = 17/634 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRM--NLIGVVFDA 57
MY K G D A+ +F+ + ++VSWN+++SGF + S D + M G++ D
Sbjct: 75 MYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDI 134
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T T L C G+++H L VK GL +V V N+L+ MYS+ G L EA+ +FD+
Sbjct: 135 ATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDK 194
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEM-MRKGLRLDHVSFTSAASACGHEKNLE 176
K++VSWN ++ G G Y EA EM M++ + ++ V+ + AC L
Sbjct: 195 NNRKNAVSWNTMIGGLCTKG-YIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLR 253
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
K++HG SI+ G+ V N ++ Y+KC + A +VF M + V SW +I
Sbjct: 254 SLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCA 313
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + A++L+ +M G+ P+ T L+ A + ++ G+ +HG ++ +
Sbjct: 314 QNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSF 373
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ L+++Y + +FD + + +SWNA+ISGY+QNGL A+ F ++ +
Sbjct: 374 IGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDG 433
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ SVL A ++ +L+ G+ H + +K L D V + +DMY K G I E
Sbjct: 434 FQPSDIAVVSVLGA--CSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKE 491
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S+ VF+ + K +W AII+A HGD E + F+ M G PD TF+ +LTVC
Sbjct: 492 SRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSH 551
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G F+ M + IEP +HY+C++DMLGR GRL++A LV ++P P V
Sbjct: 552 AGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWS 611
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLL CR G +E+G+ +A+ L+++EP +YV +SNLYA G W+ V +R+ +K G
Sbjct: 612 SLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIG 671
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
++K+ G SW ++G +H F +GDN P+S+E+
Sbjct: 672 LQKDAGCSWIELG--GKVHSFVAGDNLLPQSKEM 703
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 273/519 (52%), Gaps = 27/519 (5%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T+ + C G +H +++K GL +V+VGNALI MY ++G + A +VF
Sbjct: 30 DNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVF 89
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM--RKGLRLDHVSFTSAASACGHEK 173
MP ++ VSWN+I+SG++++G + + L+EMM +GL D + + C E
Sbjct: 90 HYMPVRNLVSWNSIISGFSENG-FSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREV 148
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
++++G +IHG+++K+G V V N L+ YSKC +A +F + + +N +SW TMI
Sbjct: 149 DVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIG 208
Query: 234 MNRE-----DAVSLFKEMRL-DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+A +LF+EM++ + + N+VT + ++ A + ++ + +HG I+ F
Sbjct: 209 GLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQ 268
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG-----LSLAAVQ 342
+ V N + YA+ + +E+VF + + + SWNALI G AQNG L+L
Sbjct: 269 YDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQM 328
Query: 343 AFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
+ G++ P+ +T GS+L + +A SL++G+ H +++ GL+ D +G +LL +Y
Sbjct: 329 TYSGLV----PDWFTIGSLL--LASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLY 382
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
G ++ +F+ +EKS +W A+IS +++G E + F+++ + G +P I +
Sbjct: 383 IHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVV 442
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC-MVDMLGRVGRLEEAEELVGQIP 521
SVL C + + G+ LK +E +C +DM + G ++E+ + +
Sbjct: 443 SVLGACSQQSALRLGKETHCYALKALLMEDV--FVACSTIDMYAKSGCIKESRSVFDGLK 500
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGS 560
L+ +++ A +HG+ GE + +M G
Sbjct: 501 -NKDLASWNAIIAAYGVHGD---GEESIELFERMRKVGQ 535
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/536 (26%), Positives = 255/536 (47%), Gaps = 29/536 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLI-GVVFD 56
++MY K G +A +F+ N + VSWNT++ G +A + M + + +
Sbjct: 176 VDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVN 235
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT L CL+ +LH ++ G + V N + Y++ G L+ A RVF
Sbjct: 236 EVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFY 295
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M K SWNA++ G Q+GD +A+ I+M GL D + S A H K+L
Sbjct: 296 SMETKTVNSWNALIGGCAQNGD-PRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLR 354
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
GK++HG ++ G +G L+S Y C + A +F M +++ +SW MIS
Sbjct: 355 YGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYS 414
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
EDA+ LF+++ DG P+D+ + ++ A S + ++ G+ H +K + +
Sbjct: 415 QNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVF 474
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V I MYA+ +++S VFD L +++ SWNA+I+ Y +G +++ F + K
Sbjct: 475 VACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVG 534
Query: 352 K-PNAYTFGSVLNAVGAAEDIS--LKHGQRCHS-HIIKVGLDSDPIVGSALLDMYGKRGS 407
+ P+ +TF +L A + LK+ + H I+ L+ V +DM G+ G
Sbjct: 535 QMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACV----MDMLGRAGR 590
Query: 408 IFESQRVFNETQEKSEF-AWTAIISALARHGDYE---SVMNQFKEMENKGVRPDSITFLS 463
+ ++ R+ +E E+ + W++++S G+ E V + E+E K V + ++ +
Sbjct: 591 LDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVE-NYVSLSN 649
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
+ GR + + R M+KD ++ D +++ G+V + L+ Q
Sbjct: 650 LYAGSGRWDDVRRVRQ----MIKDIGLQ--KDAGCSWIELGGKVHSFVAGDNLLPQ 699
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 203/610 (33%), Positives = 333/610 (54%), Gaps = 23/610 (3%)
Query: 45 ALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR 104
A+ M G + Y L C++ +H + K G ++++V +L+ Y R
Sbjct: 66 AMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMR 125
Query: 105 WGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS 164
G +ARR+FD MP ++ V+W A+++GYT + + + +EM+ G H + +
Sbjct: 126 CGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPAL-GLEVFVEMLEMGRYPSHYTLGA 184
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
+AC +++LGKQ+HG +IK G + S+GN L S Y+K A + F R+ ++N
Sbjct: 185 TLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKN 244
Query: 225 VISWTTMISMNRED------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
VI+WTTMIS ED +SLF +M +DGV PN+ T ++ + G+ +
Sbjct: 245 VITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQ 304
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ----- 333
K + V N + +Y R ++ ++F+++ II+WNA+ISGYAQ
Sbjct: 305 AFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSA 364
Query: 334 -NGLSLAA--VQAF--FGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
+ L + QA F +K S KP+ +TF S+L+ A ++L+ G++ H+ IK
Sbjct: 365 KDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAM--MALEQGEQIHAQTIKS 422
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
G SD +V SAL++MY K G I ++ + F E ++ WT++IS ++HG + + F
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLF 482
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
+EM GVRP+ ITF+S+L+ C G++ + H FD M K+Y IEP DHY CM+DM R
Sbjct: 483 EEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVR 542
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLM 566
+GR+E+A + + P ++ SL+ CR HGN+E+ AD L++++P G +Y+L+
Sbjct: 543 LGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILL 602
Query: 567 SNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
N+Y W+ VA +RK MK + V SW + D ++ F + D THP++ E+Y+
Sbjct: 603 LNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIK--DKVYFFRANDRTHPQATELYQ 660
Query: 627 MAECLGSEMK 636
+ E L + K
Sbjct: 661 LLENLLEKAK 670
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 241/480 (50%), Gaps = 29/480 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE-KSDDALSFALRMNLI--GVVFDA 57
+N Y + G A +F+ + ++V+W +++G+ S AL + + ++ G
Sbjct: 120 VNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSH 179
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T L+ CL G Q+H +K+G +S +GN+L ++Y++ G L A R F
Sbjct: 180 YTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWR 239
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P K+ ++W ++S +D + + I+M+ G+ + + TS S CG +L L
Sbjct: 240 IPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNL 299
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+ S K+G T++ V N M Y + T +A ++F +M D ++I+W MIS
Sbjct: 300 GKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQ 359
Query: 234 ---MNRED---------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
++D A+++F++++ + P+ TF ++ S +++G IH
Sbjct: 360 IMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQT 419
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IK+ FLS+ V + L+ MY + +QD+ K F E+ R ++W ++ISGY+Q+G A+
Sbjct: 420 IKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAI 479
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SAL 398
Q F + + +PN TF S+L+A A L + ++K +P+V +
Sbjct: 480 QLFEEMRLAGVRPNEITFVSLLSACSYA---GLVEEAEHYFDMMKKEYCIEPVVDHYGCM 536
Query: 399 LDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVM---NQFKEMENKGV 454
+DM+ + G + ++ T E +E W+++++ HG+ E ++ E++ KG+
Sbjct: 537 IDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGI 596
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 208/640 (32%), Positives = 347/640 (54%), Gaps = 15/640 (2%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNL-IGVVFDAVTYS 61
K G+ +A +FN +++ D +SW +++G+ S++AL M + G+ D S
Sbjct: 96 KLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVS 155
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
AL C FG LH VK GL + V+V +AL+ MY + G+ + VF+ M +
Sbjct: 156 VALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTR 215
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
+ VSW A++ G G ++ + EM R + D +F A A L GK I
Sbjct: 216 NVVSWTAVIVGLVHAG-CSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAI 274
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NR 236
H +IK G+ V N L + YSKC ++F +M +V+SWT +I +
Sbjct: 275 HAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDE 334
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
E A+ FK MR V PN+ TF +I A + + K G IHG ++ + SV N +
Sbjct: 335 ERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSI 394
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNA 355
IT+Y++ +Q++ VFD ++ ++IISW+ +IS Y Q + A + +E KPN
Sbjct: 395 ITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNE 454
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+ SVL+ G+ L+ G++ H++ + +GLD + +V SAL+ MY + G++ E+ ++F
Sbjct: 455 FALASVLSVCGSMA--LLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIF 512
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ + +WTA+I+ A HG + ++ F+ + + G+ PD +TF+ +LT C G++
Sbjct: 513 DSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVD 572
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
G + + M +Y I PS +HY C++D+L R GRL EAE +V +P V +LL A
Sbjct: 573 LGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRA 632
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
CR HG+++ A+ ++++ P +G+++ ++N+Y+ G E A +RK MKSKGV KE
Sbjct: 633 CRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEP 692
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
G+SW + D L+ F +G +HP S++I + E L + +
Sbjct: 693 GWSW--INSNDQLNTFVAGVQSHPLSKQITTILELLRTSI 730
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 244/502 (48%), Gaps = 28/502 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G+ ++ +F N+ ++VSW V+ G S D LS+ M V +D+
Sbjct: 193 VDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDS 252
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ AL + +G +H+ +K G + YV N L TMYS+ + R+F +
Sbjct: 253 HTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGK 312
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D VSW ++ Y Q GD A+ A M + + + +F S SAC + +
Sbjct: 313 MSTPDVVSWTNLIMTYVQMGDEE-RALDAFKRMRKSDVSPNEYTFASVISACANLAITKW 371
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+QIHG ++++G +SV N +++ YSKC + +A+ VF M +++ISW+T+IS+
Sbjct: 372 GEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQ 431
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ ++A + M +G PN+ ++ L++ G+ +H + E V
Sbjct: 432 GSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMV 491
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LI+MY+R ++Q++ K+FD + +I+SW A+I+GYA++G S A+ F +
Sbjct: 492 HSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGL 551
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS-----ALLDMYGKRG 406
P+ TF +L A A + L + K+ + I S ++D+ + G
Sbjct: 552 MPDYVTFIGILTACNHAGLVDLGF------YYYKLMTNEYQIAPSKEHYGCIIDLLCRAG 605
Query: 407 SIFESQR-VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS----ITF 461
+ E++ V N + W+ ++ A HGD + + ++M + P+S IT
Sbjct: 606 RLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLR--LHPNSAGAHITL 663
Query: 462 LSVLTVCGRNGMIHKGRHLFDS 483
++ + GR R L S
Sbjct: 664 ANIYSASGRREEAAHVRKLMKS 685
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 206/435 (47%), Gaps = 17/435 (3%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
N+ + + G++ EAR +F++M ++D +SW +++GY + IL + GL
Sbjct: 88 NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
+ D + A AC N+ G+ +HG S+K G V V + L+ Y K T
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207
Query: 216 VFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
VF M RNV+SWT +I + D +S F EM V + TF + A + L
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL 267
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+ G+ IH IK F V N L TMY++ ++F ++S +++SW LI
Sbjct: 268 LHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMT 327
Query: 331 YAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
Y Q G A+ AF + K + PN YTF SV++A A K G++ H H +++GL
Sbjct: 328 YVQMGDEERALDAFKRMRKSDVSPNEYTFASVISA--CANLAITKWGEQIHGHALRLGLV 385
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
V ++++ +Y K G + E+ VF+ K +W+ IIS + + N M
Sbjct: 386 DALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWM 445
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH----YSCMVDMLG 505
+G +P+ SVL+VCG ++ G+ + Y + DH +S ++ M
Sbjct: 446 SREGPKPNEFALASVLSVCGSMALLEPGKQ-----VHAYALCIGLDHETMVHSALISMYS 500
Query: 506 RVGRLEEAEELVGQI 520
R G L+EA ++ I
Sbjct: 501 RSGNLQEASKIFDSI 515
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 216/635 (34%), Positives = 345/635 (54%), Gaps = 25/635 (3%)
Query: 23 PD--IVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGL 77
PD VS+ T++ G+ +S D+ + R++ G + ++T L + E
Sbjct: 2 PDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAY 61
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
LH+ I K G +S +VG ALI Y+ G + AR+ FD + KD VSW +++ Y ++
Sbjct: 62 SLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEND 121
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ +++ EM G +H +F AC + +GK +HG +K Y + VG
Sbjct: 122 RFQ-DSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVC 252
L+ Y+K D +VF M +VI W+ MIS +AV LF +MR V
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240
Query: 253 PNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
PN TF ++ + SI NL + G+ +H +K V N L+ +YA+ + +S K
Sbjct: 241 PNQFTFASVLQSCASIENL-QLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMK 299
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAED 370
+F EL R ++WN +I GY Q+G A+ + +++ + + + T+ SVL A +
Sbjct: 300 LFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAA 359
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+ L G + HS +K D D +VG+AL+DMY K GSI ++ VF+ E+ E +W A+I
Sbjct: 360 MEL--GTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMI 417
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
S + HG + F+ M+ P+ +TF+S+L+ C G++ G++ F SM++DY I
Sbjct: 418 SGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGI 477
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIAD 550
EP +HY+CMV +LGR G L++A +L+ +IP P + V ++LLGAC IH +V++G A
Sbjct: 478 EPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQ 537
Query: 551 ALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHG 610
+++++P ++VL+SN+YA W VA +RK MK+KGV+KE G SW + I +H
Sbjct: 538 QILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGI--VHY 595
Query: 611 FSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
FS GD +HP + I M E +LN K E+A
Sbjct: 596 FSVGDTSHPDMKMISGMLE-------WLNMKTEKA 623
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 246/452 (54%), Gaps = 16/452 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++ Y G + A F+ + D+VSW +++ + ++D D+L M ++G +
Sbjct: 83 IDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNH 142
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L C+ E F G +H ++K + ++YVG L+ +Y+++G + RVF+E
Sbjct: 143 FTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEE 202
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D + W+ ++S Y Q + EA+ +M R + + +F S +C +NL+L
Sbjct: 203 MPKHDVIPWSFMISRYAQ-SNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQL 261
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GKQ+H +K+G +V V N LM Y+KC ++ K+F + +RN ++W TMI
Sbjct: 262 GKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQ 321
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S + + A+SL+K M V ++VT+ ++ A + ++ G IH L +KT + + V
Sbjct: 322 SGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVV 381
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N LI MYA+ S++++ VFD LS R+ ISWNA+ISGY+ +GL A++A F +++E++
Sbjct: 382 GNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKA-FQMMQETE 440
Query: 353 --PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSIF 409
PN TF S+L+A A + + GQ +++ G++ + ++ + G+ G +
Sbjct: 441 CVPNKLTFVSILSACSNAGLLDI--GQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLD 498
Query: 410 ESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
++ ++ E E + W A++ A H D +
Sbjct: 499 KAVKLIEEIPLEPNVKVWRALLGACVIHNDVD 530
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 209/404 (51%), Gaps = 14/404 (3%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP++++VS+ ++ GY Q + ++ ++ L + R+G L+ FT+ + E
Sbjct: 1 MPDRNTVSFVTLIQGYVQ--SFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAE 58
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
L +H K+G+ ++ VG L+ Y+ C A + F + ++++SWT M++
Sbjct: 59 LAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYA 118
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E D++ LF EMR+ G PN TF G++ A G+ +HG +KT + +
Sbjct: 119 ENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLY 178
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+ +Y +F D +VF+E+ ++I W+ +IS YAQ+ S AV+ FG ++ +
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVE-LFGQMRRA 237
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
PN +TF SVL + + E++ L G++ H H++KVGLD + V +AL+D+Y K G +
Sbjct: 238 FVLPNQFTFASVLQSCASIENLQL--GKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLD 295
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
S ++F E ++E W +I + GD + ++ +K M V+ +T+ SVL C
Sbjct: 296 NSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACA 355
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ G + LK + + + ++DM + G ++ A
Sbjct: 356 SLAAMELGTQIHSLSLKTIY-DKDVVVGNALIDMYAKCGSIKNA 398
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 217/667 (32%), Positives = 348/667 (52%), Gaps = 49/667 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF----------EKSD----------- 39
+N KSGQ + A +F+ + D SWNT++S + E D
Sbjct: 72 LNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWS 131
Query: 40 -------------DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKF 86
+A M L G T + L C G +H +VK
Sbjct: 132 SIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKN 191
Query: 87 GLDSEVYVGNALITMYSRWGRLVEARRVFD--EMPNKDSVSWNAILSGYTQDGDYGVEAI 144
G + V+V L+ MY++ + EA +F E K+ V W A+++GY Q+GD G +A+
Sbjct: 192 GFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGD-GYKAV 250
Query: 145 LALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTY 204
M +G+ + +F + +AC G+Q+HG +K G+G++V V + L+ Y
Sbjct: 251 EFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMY 310
Query: 205 SKCEVTGDANKVFRRMHDRNVISWTT-MISMNR----EDAVSLFKEMRLDGVCPNDVTFI 259
+KC +A + M D +V+SW + M+ R E+A+ LFK M + +D TF
Sbjct: 311 AKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFP 370
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
+++ +G++ + +HGL IKT F + V N L+ MYA+ M + VF+++ +
Sbjct: 371 SVLNCCVVGSI--NPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEK 428
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQR 378
++ISW +L++GYAQN +++ F + + P+ + S+L+A AE L+ G++
Sbjct: 429 DVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSA--CAELTLLEFGKQ 486
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H IK GL V ++L+ MY K G + ++ +F Q K WTAII A++G
Sbjct: 487 VHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGK 546
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS 498
+ + + M + G RPD ITF+ +L C G++ +GR F M K Y I+P P+HY+
Sbjct: 547 GRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYA 606
Query: 499 CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPA 558
CM+D+ GR G+L+EA++L+ Q+ P +V +SLL ACR+H N+E+ ER A L ++EP
Sbjct: 607 CMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPM 666
Query: 559 GSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTH 618
+ YV++SN+Y+ W VA +RK MKSKG+ KE G SW ++ ++ F S D H
Sbjct: 667 NAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEIN--SRVNTFISDDRGH 724
Query: 619 PRSEEIY 625
PR EIY
Sbjct: 725 PREAEIY 731
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 226/465 (48%), Gaps = 47/465 (10%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG-------------- 137
+Y N L+ S+ G++ +AR++FD+MP KD SWN ++S Y G
Sbjct: 65 IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 124
Query: 138 --------------DYG--VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
+G VEA M +G + + S C ++ G+ I
Sbjct: 125 KSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMI 184
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DR-NVISWTTMISMNRED- 238
HG +K G+ +V V L+ Y+KC+ +A +F+ + DR N + WT M++ ++
Sbjct: 185 HGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNG 244
Query: 239 ----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
AV F+ M GV N TF ++ A S G +HG +K+ F S V +
Sbjct: 245 DGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQS 304
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKP 353
L+ MYA+ +++++ + + + +++SWN+L+ G+ ++GL A++ F + + K
Sbjct: 305 ALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKI 364
Query: 354 NAYTFGSVLNA--VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ YTF SVLN VG+ S+ H IIK G ++ +V +AL+DMY K G + +
Sbjct: 365 DDYTFPSVLNCCVVGSINPKSV------HGLIIKTGFENYKLVSNALVDMYAKTGDMDCA 418
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
VF + EK +WT++++ A++ +E + F +M GV PD S+L+ C
Sbjct: 419 YTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAEL 478
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
++ G+ + +K + S Y+ +V M + G L++A+ +
Sbjct: 479 TLLEFGKQVHLDFIKS-GLRWSQSVYNSLVAMYAKCGCLDDADAI 522
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 214/614 (34%), Positives = 332/614 (54%), Gaps = 15/614 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVF-DAVT 59
Y G A +F+ L NP + SWN ++ + S DAL ++M G + D T
Sbjct: 66 YAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYT 125
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y + C D+ G +H+ V G DS+ +V N+L+ MY G + ARRVFD M
Sbjct: 126 YPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMR 185
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ VSWN +++GY ++G EA++ M+ KG+ D + S C + K LE+G+
Sbjct: 186 ERTLVSWNTMINGYFKNGCVK-EALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGR 244
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM-----ISM 234
++H + G +SV N L+ Y+KC +A +F M R+V+SWTTM ++
Sbjct: 245 RVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNG 304
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+ A+ L + M+ + V PN VT ++ A + +K GR +HG I+ SE V
Sbjct: 305 DARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVET 364
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI MYA+ ++ S +VF + S + WNA+ISG NGLS A++ F ++ E+ P
Sbjct: 365 ALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDP 424
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N T S+L A D L+ + H ++I+ G S V + L+D+Y K GS+ +
Sbjct: 425 NDATLNSLLPAYAFLTD--LQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHN 482
Query: 414 VFN--ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+FN ++K W+AII+ HG E+ ++ F +M GV+P+ ITF S+L C
Sbjct: 483 IFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHA 542
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G LF ML+D + DHY+C++D+LGR GRLEEA EL+ + P +V +
Sbjct: 543 GLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGA 602
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLG+C IH NVE+GE A L ++EP +G+YVL++N+Y+ G W +R M + G+
Sbjct: 603 LLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGL 662
Query: 592 RKEVGFSWADVGDI 605
RK S +V +I
Sbjct: 663 RKTPAHSLIEVRNI 676
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 143/506 (28%), Positives = 252/506 (49%), Gaps = 15/506 (2%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVY---VGNALITMYSRWGRLVEARRVFD 116
Y + L C + Q+H+ + GL S Y + ++L Y+ +G AR++FD
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFD 80
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL-DHVSFTSAASACGHEKNL 175
E+ N SWNA++ YT G +A+ ++M+ G R D+ ++ ACG
Sbjct: 81 ELRNPSLFSWNAMIRMYTNSG-LSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLP 139
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E+G IH ++ G+ + V N LM+ Y C A +VF M +R ++SW TMI+
Sbjct: 140 EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGY 199
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++A+ +F M G+ P+ T + ++ S ++ GR +H L N +
Sbjct: 200 FKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDI 259
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
SV N L+ MYA+ +M +++ +F E+ R+++SW +++GY NG + +A+ + E
Sbjct: 260 SVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
S KPN T SVL+A A SLKHG+ H I+ L+S+ IV +AL+DMY K ++
Sbjct: 320 SVKPNFVTLASVLSA--CASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVN 377
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
S RVF++T ++ W AIIS +G + FK+M + V P+ T S+L
Sbjct: 378 LSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYA 437
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP-GGPGLSV 528
+ + R++ +++ + + + ++D+ + G LE A + IP +
Sbjct: 438 FLTDLQQARNMHGYLIRSGFLS-RIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIIT 496
Query: 529 LQSLLGACRIHGNVEMGERIADALMK 554
+++ +HG+ E + D +++
Sbjct: 497 WSAIIAGYGMHGHGETAISLFDQMVQ 522
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 261/531 (49%), Gaps = 57/531 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M MY G+ + A +F+ + +VSWNT+++G+ K+ +AL M G+ D
Sbjct: 165 MAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDC 224
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C + G ++H+L+ L ++ V N+L+ MY++ G + EA+ +F E
Sbjct: 225 ATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYE 284
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M +D VSW +++GY +GD + L L +MM+ + ++ + V+ S SAC +L+
Sbjct: 285 MDKRDVVSWTTMMNGYILNGD--ARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLK 342
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+ +HG +I+ + V V L+ Y+KC + +VF + + W +IS
Sbjct: 343 HGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCI 402
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++R+ A+ LFK+M ++ V PND T L+ A + +++ R +HG I++ FLS
Sbjct: 403 HNGLSRK-AIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRI 461
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVI 348
V LI +Y++ S++ + +F+ + ++II+W+A+I+GY +G A+ F ++
Sbjct: 462 EVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMV 521
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ KPN TF S+L+A H+ ++ GL
Sbjct: 522 QSGVKPNEITFTSILHACS-------------HAGLVDEGL------------------G 550
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+F+ N+ +++ +T +I L R G E + M RP+ + ++L
Sbjct: 551 LFKFMLEDNQMSLRTDH-YTCVIDLLGRAGRLEEAYELIRTM---AFRPNHAVWGALLGS 606
Query: 468 CGRNGMIHKGRHLFDSMLK-DYHIEP-SPDHYSCMVDMLGRVGRLEEAEEL 516
C +IH+ L + K + +EP + +Y + ++ VGR +AE +
Sbjct: 607 C----VIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHV 653
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 210/639 (32%), Positives = 357/639 (55%), Gaps = 18/639 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M+ ++A C+F+++ D +SWN++++ + + +L + +M D
Sbjct: 202 ISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDY 261
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T S L C + +G LH ++VK GL+S V V N+L++MYS+ G+ +A VF +
Sbjct: 262 ITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHK 321
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D +SWN++++ + +G+Y A+ LIEM++ ++V+FT+A SAC NLE
Sbjct: 322 MRERDLISWNSMMASHVDNGNYP-RALELLIEMLQTRKATNYVTFTTALSAC---YNLET 377
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
K +H I +G ++ +GN L++ Y K A +V + M DR+ ++W +I +
Sbjct: 378 LKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHAD 437
Query: 235 NRED--AVSLFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N+E A+ F +R +GV N +T + L+ A +S +L+ G IH + F E
Sbjct: 438 NKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETF 497
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + LITMYA+ + S +FD L+ + +WNA++S A G A++ + +
Sbjct: 498 VQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDG 557
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ ++F SV +A+ + L GQ+ HS IIK G +S+ V +A +DMYGK G I +
Sbjct: 558 IHLDQFSF-SVAHAIIGNLTL-LDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDD 615
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
R+ + + +S+ +W +ISALARHG ++ F EM + G+RPD +TF+S+L+ C
Sbjct: 616 VFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSH 675
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G F SM + + +H C++D+LGR G+L EAE + ++P P V +
Sbjct: 676 GGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWR 735
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLL AC+IHGN+E+ + AD L +++ + +YVL SN+ A W V +RK M+S
Sbjct: 736 SLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHN 795
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
++K+ SW + + + F GD HP++ EIY E
Sbjct: 796 IKKKPACSWVKLK--NQVTTFGMGDQYHPQNAEIYAKLE 832
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 272/536 (50%), Gaps = 20/536 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F + P+IVSW +++ G+ + + +S R+ GV + +T + C
Sbjct: 116 VFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVD 175
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
+ G Q+ ++K GLD+ V V N+LI+M+ + EA VFD+M +D++SWN+I++
Sbjct: 176 KMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITA 235
Query: 133 YTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
+G E L MR + D+++ ++ CG +NL G+ +HG+ +K G
Sbjct: 236 SVHNGH--CEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLE 293
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM 246
++V V N L+S YS+ + DA VF +M +R++ISW +M++ N A+ L EM
Sbjct: 294 SNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEM 353
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
N VTF A+S ++ +++H I + N L+TMY +F SM
Sbjct: 354 LQTRKATNYVTFTT---ALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSM 410
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAV 365
+++V + R+ ++WNALI G+A N AA++AF + +E P N T ++L+A
Sbjct: 411 AAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAF 470
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ +D+ L HG H+HI+ G + + V S+L+ MY + G + S +F+ K+
Sbjct: 471 LSPDDL-LDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSST 529
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W AI+SA A +G E + +M N G+ D +F + G ++ +G+ L ++
Sbjct: 530 WNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLII 589
Query: 486 KDYHIEPSPDH-YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
K H S D+ + +DM G+ G +++ ++ Q P L+ A HG
Sbjct: 590 K--HGFESNDYVLNATMDMYGKCGEIDDVFRILPQ-PRSRSQRSWNILISALARHG 642
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 250/476 (52%), Gaps = 20/476 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MY K G + A +F+ + + SWN ++SGF + A+ F M GV +
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 60 YSTALSFCLDHEGFLF--GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ ++ C D G + Q+H+ ++K GL +V+VG +L+ Y +G + E VF E
Sbjct: 61 AASLVTAC-DRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKE 119
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
+ + VSW +++ GY +G V+ ++++ +R+ G+ + + + +CG +
Sbjct: 120 IEEPNIVSWTSLMVGYAYNG--CVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKM 177
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
LG Q+ G IK G T VSV N L+S + C+ +A+ VF M +R+ ISW ++I+ +
Sbjct: 178 LGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASV 237
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E ++ F +MR + +T L+ ++ GR +HG+ +K+ S
Sbjct: 238 HNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVC 297
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VCN L++MY++ +D+E VF ++ R++ISWN++++ + NG A++ +++
Sbjct: 298 VCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTR 357
Query: 352 KPNAY-TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
K Y TF + L+A E + + H+ +I +GL + I+G+AL+ MYGK GS+
Sbjct: 358 KATNYVTFTTALSACYNLETLKI-----VHAFVILLGLHHNLIIGNALVTMYGKFGSMAA 412
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+QRV ++ E W A+I A + + + + F + +GV + IT +++L+
Sbjct: 413 AQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLS 468
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 146/318 (45%), Gaps = 10/318 (3%)
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVCPNDVTF 258
YSK A VF +M +RN SW ++S + A+ F M GV P+
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61
Query: 259 IGLIHAISIGNLVKEGRM-IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
L+ A + EG +H IK + V L+ Y F + + + VF E+
Sbjct: 62 ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHG 376
I+SW +L+ GYA NG + + + ++ N +V+ + G D L G
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKML--G 179
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
+ +IK GLD+ V ++L+ M+G SI E+ VF++ +E+ +W +II+A +
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
G E + F +M + D IT ++L VCG + GR L ++K +E +
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKS-GLESNVCV 298
Query: 497 YSCMVDMLGRVGRLEEAE 514
+ ++ M + G+ E+AE
Sbjct: 299 CNSLLSMYSQAGKSEDAE 316
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%)
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K GSI +Q VF++ E++E +W ++S R G Y+ M F M GVRP S
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 461 FLSVLTVCGRNGMIHKG 477
S++T C R+G + +G
Sbjct: 61 AASLVTACDRSGCMTEG 77
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 216/655 (32%), Positives = 352/655 (53%), Gaps = 17/655 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+N+Y K G A +F+ +IV WN +L+GF E ++A+ M + D
Sbjct: 367 INLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDE 426
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L C F G Q+H + +K +D ++V NA + MYS++G + +A+ +F
Sbjct: 427 FTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSL 486
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P KDS+SWNA+ G Q+ + EA+ L M G+ D VSF++A +AC + + E
Sbjct: 487 IPYKDSISWNALTVGLAQNLEEE-EAVCMLKRMRLHGITPDDVSFSTAINACSNIRATET 545
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQIH ++IK G ++ +VG+ L+ YSK + K+F ++ +++ +I+
Sbjct: 546 GKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQ 605
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++A+ LF+++ DG+ P+ VTF ++ S G+ +H +K+ L + ++
Sbjct: 606 NNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTL 665
Query: 293 CNC-LITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIK- 349
L +Y + + ++D+ K+ E+ + + W A+ISGYAQNG ++ +F+ +
Sbjct: 666 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC 725
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ + TF SVL A ++ + G+ H I K G S SAL+DMY K G +
Sbjct: 726 NVRSDEATFASVLKAC--SDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVI 783
Query: 410 ESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S F E + K + W ++I A++G + + F++ME ++PD +TFL VL C
Sbjct: 784 SSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIAC 843
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G+I +GRH F M K Y + P DHY+C +D+LGR G L+EA+E + Q+P P V
Sbjct: 844 THSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVV 903
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+ L ACR+H + E G+ A L+++EP S +YVL+S+L+A G+W + R+ M+
Sbjct: 904 WATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMRE 963
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
KGV K G SW VG+ L F D HP + IY M L MK N E
Sbjct: 964 KGVAKFPGCSWITVGNKTSL--FLVQDKYHPDNLRIYEMLGDLTGMMKKDNDIDE 1016
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/479 (33%), Positives = 257/479 (53%), Gaps = 26/479 (5%)
Query: 7 SGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDA--------- 57
SG+ D A + + P V+WN V+SG +S L N++G+ D
Sbjct: 272 SGRLDHATALLKKMPTPSTVAWNAVISGHAQS------GLEFNVLGLYKDMRSWGLWPTR 325
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ LS + + F+ G Q+H+ V GLD+ V+VG++LI +Y++ G +A+ VFD
Sbjct: 326 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 385
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
K+ V WNA+L+G+ Q+ + EAI MMR L+ D +F S AC + + L
Sbjct: 386 SCEKNIVMWNAMLTGFVQN-ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 444
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GKQ+H V+IK + V N + YSK GDA +F + ++ ISW +
Sbjct: 445 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 504
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++ E+AV + K MRL G+ P+DV+F I+A S + G+ IH L IK S +V
Sbjct: 505 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 564
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LI +Y++ ++ S K+F ++ I+ NALI+G+ QN A+Q F V+K+
Sbjct: 565 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 624
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFE 410
KP++ TF S+L+ G + ++ G++ H + +K G L D ++G +L +Y K + +
Sbjct: 625 KPSSVTFSSILS--GCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLED 682
Query: 411 SQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ ++ E + K+ F WTAIIS A++G + + F M + VR D TF SVL C
Sbjct: 683 ANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKAC 741
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 239/494 (48%), Gaps = 53/494 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G A +F+ + PD + W+++++ + + +AL+ RM+ +G D
Sbjct: 200 VDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQ 259
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT T +I+ + GRL A + +
Sbjct: 260 VTLVT-----------------------------------IISTLASSGRLDHATALLKK 284
Query: 118 MPNKDSVSWNAILSGYTQDG-DYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNL 175
MP +V+WNA++SG+ Q G ++ V L L + MR GL +F S SA + K
Sbjct: 285 MPTPSTVAWNAVISGHAQSGLEFNV---LGLYKDMRSWGLWPTRSTFASMLSAAANMKAF 341
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
G+Q+H ++ G +V VG+ L++ Y+KC DA VF ++N++ W M++
Sbjct: 342 VEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGF 401
Query: 234 -MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
N E+A+ +F+ M + ++ TF+ ++ A + + G+ +H + IK
Sbjct: 402 VQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISL 461
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
V N + MY+++ ++ D++ +F + ++ ISWNAL G AQN AV + +
Sbjct: 462 FVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLH 521
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ +F + +NA + + G++ H IK G+ S+ VGS+L+D+Y K G +
Sbjct: 522 GITPDDVSFSTAINACSNIR--ATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVE 579
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC- 468
S+++F + S A+I+ ++ + + + F+++ G++P S+TF S+L+ C
Sbjct: 580 SSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 639
Query: 469 -GRNGMIHKGRHLF 481
N I K H +
Sbjct: 640 GSLNSAIGKQVHCY 653
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/531 (24%), Positives = 241/531 (45%), Gaps = 51/531 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DAL-SFALRMNLIGVVFD 56
+ +YCKSG+ A + +++LS +S D L +F G D
Sbjct: 98 VELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPD 157
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ LS C +G Q+H +VK G S V+ AL+ MY++ G + ARRVFD
Sbjct: 158 QFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFD 217
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ D++ W+++++ Y + G Y EA+ M + G D V+ +
Sbjct: 218 GIACPDTICWSSMIACYHRVGCYQ-EALALFSRMDKMGSAPDQVTLVT------------ 264
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
++ST + A + ++M + ++W +IS +
Sbjct: 265 -----------------------IISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHA 301
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + + L+K+MR G+ P TF ++ A + EG+ +H + +
Sbjct: 302 QSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVF 361
Query: 292 VCNCLITMYARFESMQDSEKVFDELSC-REIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + LI +YA+ D++ VFD LSC + I+ WNA+++G+ QN L A++ F +++
Sbjct: 362 VGSSLINLYAKCGCPSDAKNVFD-LSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRY 420
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ + + +TF S+L A L G++ H IK +D V +A LDMY K G+I
Sbjct: 421 TLQTDEFTFVSILGACTYLSSFYL--GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIG 478
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++ +F+ K +W A+ LA++ + E + K M G+ PD ++F + + C
Sbjct: 479 DAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACS 538
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
G+ + +K Y I + S ++D+ + G +E + ++ Q+
Sbjct: 539 NIRATETGKQIHCLAIK-YGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV 588
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 207/455 (45%), Gaps = 56/455 (12%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH I++ G +G++L+ +Y + GR+ A + S + +++LS + + G
Sbjct: 78 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137
Query: 139 YGVEAILALIEMMR--KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G +L +R G R D SAC L G+Q+H +K G+ + V
Sbjct: 138 PG--DVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGV 251
L+ Y+KC +A +VF + + I W++MI+ ++A++LF M G
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ VT + + I L GR+ H +
Sbjct: 256 APDQVTLVTI-----ISTLASSGRLDH------------------------------ATA 280
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-----PNAYTFGSVLNAVG 366
+ ++ ++WNA+ISG+AQ+GL + G+ K+ + P TF S+L+A
Sbjct: 281 LLKKMPTPSTVAWNAVISGHAQSGLEFNVL----GLYKDMRSWGLWPTRSTFASMLSA-- 334
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
AA + GQ+ H+ + GLD++ VGS+L+++Y K G +++ VF+ + EK+ W
Sbjct: 335 AANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMW 394
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
A+++ ++ E + F+ M ++ D TF+S+L C + G+ + +K
Sbjct: 395 NAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 454
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ ++ S + +DM + G + +A+ L IP
Sbjct: 455 NC-MDISLFVANATLDMYSKYGAIGDAKALFSLIP 488
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 124/308 (40%), Gaps = 42/308 (13%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
+ +HG ++ G +G+ L+ Y K G A +R + ++++S +
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135
Query: 238 ----DAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
D + F+ +R G P+ ++ A S ++ GR +H +K+ F S
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
L+ MYA+ + ++ +VFD ++C + I W+++I+ Y + G A+ F
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALF-------- 247
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
S + K+G D + ++ G + +
Sbjct: 248 ----------------------------SRMDKMGSAPDQVTLVTIISTLASSGRLDHAT 279
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+ + S AW A+IS A+ G +V+ +K+M + G+ P TF S+L+
Sbjct: 280 ALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 339
Query: 473 MIHKGRHL 480
+G+ +
Sbjct: 340 AFVEGQQM 347
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Query: 374 KHGQRC---HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+H Q C H I++ G +G +L+++Y K G + + E++ A ++++
Sbjct: 70 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 129
Query: 431 SALARHGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
S AR G V+ F+ + G RPD VL+ C R G++ GR + ++K
Sbjct: 130 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS-G 188
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
S + +VDM + G + A + I
Sbjct: 189 FSSSVFCEAALVDMYAKCGDVPNARRVFDGI 219
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 207/652 (31%), Positives = 363/652 (55%), Gaps = 23/652 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVV------FDA 57
Y K + + A +F+ + + D VSWN ++S F S D L+G + FD+
Sbjct: 38 YAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGD---LDTTWQLLGAMRRSTHAFDS 94
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L G QLHS+++K GL V+ G+AL+ MY++ GR+ + VF
Sbjct: 95 RTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQS 154
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ VSWN +++ Y++ GD + A L M +G+ +D + + + + +L
Sbjct: 155 MPERNYVSWNTLVASYSRVGDCDM-AFWVLSCMELEGVEIDDGTVSPLLTLLDNAMFYKL 213
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR-RMHDRNVISWTTMISM-- 234
Q+H +K G +V N ++ YS+C DA +VF + R++++W +M+
Sbjct: 214 TMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYL 273
Query: 235 --NRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ED A +F +M+ G P+ T+ G++ A S+ G+ +HGL IK +
Sbjct: 274 MHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVP 333
Query: 292 VCNCLITMYARF--ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-I 348
V N LI+MY RF M+D+ ++F + ++ +WN++++GY Q GLS A++ F +
Sbjct: 334 VSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRC 393
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ + YTF +V+ + ++ +L+ GQ+ H +KVG D++ VGS+L+ MY K G I
Sbjct: 394 LVIEIDHYTFSAVIRS--CSDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGII 451
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++++ F T + + W +II A+HG ++ F M+ + V+ D ITF++VLT C
Sbjct: 452 EDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTAC 511
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
NG++ +G + +SM D+ I P +HY+C +D+ GR G L++A LV +P P V
Sbjct: 512 SHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYGRAGHLKKATALVETMPFEPDAMV 571
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
L++LLGACR G++E+ +IA L+++EP +YV++S +Y W A + + M+
Sbjct: 572 LKTLLGACRFCGDIELASQIAKILLELEPEEHCTYVILSEMYGRFKMWGEKASVTRMMRE 631
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNS 640
+GV+K G+SW +V + +H F++ D++HP+ EEIY + + L +K ++
Sbjct: 632 RGVKKVPGWSWIEVK--NNVHAFNAEDHSHPQCEEIYILLQQLNEGIKLFDN 681
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 225/459 (49%), Gaps = 20/459 (4%)
Query: 70 HEGFLFGL-QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
H L GL H +K G ++ Y N LIT Y++ L A +VFDEMP++D+VSWNA
Sbjct: 5 HSLTLLGLIATHCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNA 64
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
I+S + GD ++ L+ MR+ D +F S + L+LG+Q+H V +K
Sbjct: 65 IISAFASSGD--LDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLK 122
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNR----EDAVSL 242
+G +V G+ L+ Y+KC D VF+ M +RN +SW T++ S +R + A +
Sbjct: 123 VGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWV 182
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
M L+GV +D T L+ + K +H +K +VCN IT Y+
Sbjct: 183 LSCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSE 242
Query: 303 FESMQDSEKVFD-ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
S+QD+E+VFD + CR++++WN+++ Y + A + F + +P+AYT+
Sbjct: 243 CCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTG 302
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS--IFESQRVFNET 418
++ A E + G+ H +IK GLD+ V +AL+ MY + + ++ R+F
Sbjct: 303 IVGACSVQEHKTC--GKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSM 360
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
K W +I++ + G E + F +M + D TF +V+ C + G+
Sbjct: 361 DLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQ 420
Query: 479 HLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEE 515
LK + + Y S ++ M + G +E+A +
Sbjct: 421 QFHVLALK---VGFDTNSYVGSSLIFMYSKCGIIEDARK 456
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 191/377 (50%), Gaps = 15/377 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-LSFALR--MNLIGVVFDA 57
++MY K G+ D +F ++ + VSWNT+++ + + D ++F + M L GV D
Sbjct: 136 LDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDD 195
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD- 116
T S L+ + + +QLH IVK GL+ V NA IT YS L +A RVFD
Sbjct: 196 GTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDG 255
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +D V+WN++L Y + A ++M G D ++T AC +++
Sbjct: 256 AVLCRDLVTWNSMLGAYLMHEKEDL-AFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKT 314
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC--EVTGDANKVFRRMHDRNVISWTTMISM 234
GK +HG+ IK G V V N L+S Y + DA ++F M ++ +W ++++
Sbjct: 315 CGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAG 374
Query: 235 N-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
EDA+ LF +MR + + TF +I + S ++ G+ H L +K F +
Sbjct: 375 YVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTN 434
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + LI MY++ ++D+ K F+ S I WN++I GYAQ+G A+ F+ ++K
Sbjct: 435 SYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFY-MMK 493
Query: 350 ESKP--NAYTFGSVLNA 364
E K + TF +VL A
Sbjct: 494 ERKVKLDHITFVAVLTA 510
>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Brachypodium distachyon]
Length = 689
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 210/631 (33%), Positives = 345/631 (54%), Gaps = 23/631 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + PD SWN++L+ + A M+ GV + ++L
Sbjct: 47 VFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQGVAANTFALGSSLRSAAAARC 106
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G QL SL K GL V+ +AL+ MY++ GR+ +ARRVFD MP +++VSWNA+++G
Sbjct: 107 PALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSWNALIAG 166
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Y + G ++A+ I M + L D +F + +A + N L Q+HG +K G
Sbjct: 167 YVESGKV-LQALELFINMETERLVPDEATFAALLTAFD-DSNYFLMHQLHGKIVKYGSAL 224
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMISMNRE-----DAVSLFKEM 246
++V N ++ YS+C ++ ++F ++ D R++ISW M+ DA+ F M
Sbjct: 225 GLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRM 284
Query: 247 -RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
R GV + +F +I + +GR IHGL IK VCN LI MY R
Sbjct: 285 IRESGVQLDMYSFTSIISTCPEHD-DHQGRAIHGLVIKNGLEGATPVCNALIAMYTRISG 343
Query: 306 ---MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGS 360
M+D+ K FD L ++ +SWN++++GY+Q+ LS A++ FF ++ + + + Y F +
Sbjct: 344 NCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALR-FFRCMQSANIRCDEYAFSA 402
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
L + +E L+ G++ H II G S+ V S+L+ MY K G + ++++ F E +
Sbjct: 403 ALRSC--SELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADK 460
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
S W ++I A+HG V + F EM V D +TF+ ++T C G++ +G +
Sbjct: 461 GSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDEGSEI 520
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
++M Y I +HY+C VD+ GR G+LE+A+EL+ +P P V +LLGACRIHG
Sbjct: 521 LNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGACRIHG 580
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
N+E+ +A L+ EP +Y+L+S++Y+ G W AI+++ MK++G+ K G+SW
Sbjct: 581 NMELASEVASHLLVSEPKQHSTYILLSSMYSGLGMWSDRAIVQREMKNRGLSKVPGWSWI 640
Query: 601 DVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
+V + +H F++ D +HPR +EIY M L
Sbjct: 641 EVK--NEVHSFNAEDRSHPRMDEIYEMLSLL 669
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 233/456 (51%), Gaps = 21/456 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G+ A +F+ + + VSWN +++G+ +S AL + M +V D
Sbjct: 133 LHMYAKCGRVRDARRVFDGMPERNTVSWNALIAGYVESGKVLQALELFINMETERLVPDE 192
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L+ D + QLH IVK+G + V NA IT YS+ G L E+RR+FD+
Sbjct: 193 ATFAALLT-AFDDSNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFDQ 251
Query: 118 M-PNKDSVSWNAILSGYTQDG-DYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKN 174
+ ++D +SWNA+L YT G DY +A+ + M+R+ G++LD SFTS S C E +
Sbjct: 252 IGDSRDLISWNAMLGAYTYHGMDY--DAMGFFVRMIRESGVQLDMYSFTSIISTCP-EHD 308
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE---VTGDANKVFRRMHDRNVISWTTM 231
G+ IHG+ IK G V N L++ Y++ + DA K F + ++ +SW +M
Sbjct: 309 DHQGRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNSM 368
Query: 232 ISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
++ + DA+ F+ M+ + ++ F + + S +++ GR IHG I + F
Sbjct: 369 LTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGF 428
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S V + LI MY++ + D++K F+E + WN++I GYAQ+G + F
Sbjct: 429 ASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFNE 488
Query: 347 VIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++ P + TF ++ + A + + + ++ + G+ + +D+YG+
Sbjct: 489 MVELKVPLDHVTFVGLITSCSHAGLVD-EGSEILNAMETRYGIPLRMEHYACGVDLYGRA 547
Query: 406 GSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G + +++ + + E W ++ A HG+ E
Sbjct: 548 GQLEKAKELIDSMPFEPDAMVWMTLLGACRIHGNME 583
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 217/434 (50%), Gaps = 22/434 (5%)
Query: 96 NALITMYSRWGR-LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG 154
N L+T YS L ARRVFDE+P D+ SWN++L+ + G + L L M +G
Sbjct: 28 NQLLTAYSLSPLGLAAARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCL-LRAMHAQG 86
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
+ + + S+ + + LG Q+ ++ K G +V + L+ Y+KC DA
Sbjct: 87 VAANTFALGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDAR 146
Query: 215 KVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN 269
+VF M +RN +SW +I+ E A+ LF M + + P++ TF L+ A N
Sbjct: 147 RVFDGMPERNTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAALLTAFDDSN 206
Query: 270 LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL-SCREIISWNALI 328
++ HG +K +V N IT Y++ ++ +S ++FD++ R++ISWNA++
Sbjct: 207 YFLMHQL-HGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAML 265
Query: 329 SGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
Y +G+ A+ F +I+ES + + Y+F S+++ +D G+ H +IK
Sbjct: 266 GAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTCPEHDD---HQGRAIHGLVIKN 322
Query: 387 GLDSDPIVGSALLDMYGKRGS---IFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
GL+ V +AL+ MY + + ++ + F+ K +W ++++ ++H +
Sbjct: 323 GLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADAL 382
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMV 501
F+ M++ +R D F + L C ++ GR + S++ H + +++ S ++
Sbjct: 383 RFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSII---HSGFASNNFVSSSLI 439
Query: 502 DMLGRVGRLEEAEE 515
M + G L++A++
Sbjct: 440 FMYSKSGILDDAKK 453
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 203/612 (33%), Positives = 338/612 (55%), Gaps = 13/612 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++ Y + G AL +F N+ D WN ++ GF + DA+ F RM GV D
Sbjct: 67 LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDN 126
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY + C G ++H ++K GLD ++Y+GN+LI MY++ G + A VF E
Sbjct: 127 FTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFRE 186
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D VSWN+++SGY GD G ++ EM G++LD S AC E L
Sbjct: 187 MPVRDLVSWNSMISGYVSVGD-GWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRN 245
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
GK+IH ++ V V L+ Y+KC A ++F ++ D+++++W MI S+
Sbjct: 246 GKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSL 305
Query: 235 NRE--DAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N + ++ + ++M+ G + P+ +T I L+ + + G+ +HG I+ FL
Sbjct: 306 NAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLV 365
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ L+ MY ++ +E +F +++ R +ISWNA+I+ Y +NG + A+ F + ++
Sbjct: 366 LETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKT 425
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+A T S+L A AE SL+ ++ H ++ K+ LDS+ V ++++ MYGK G++
Sbjct: 426 LKPDATTIASILPAY--AELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLR 483
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F+ K +W +I A A HG + F EM KG P+ TF+S+L C
Sbjct: 484 AREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSV 543
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++++G F+SM +DY+I P +HY C++D++GR G L+ A+ + ++P P +
Sbjct: 544 AGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWG 603
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLL A R G+VE+ E A+ ++ +E +G YVL+SN+YAE G WE V ++ MK +G
Sbjct: 604 SLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEG 663
Query: 591 VRKEVGFSWADV 602
+ K VG S D+
Sbjct: 664 LEKSVGCSVVDL 675
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 219/654 (33%), Positives = 345/654 (52%), Gaps = 23/654 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N+Y K G A +F+ + ++VS+ T++ G+ ++A R+ G +
Sbjct: 91 LNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNH 150
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T L + + +H+ K G D +VG++LI YS G + AR VFD
Sbjct: 151 FVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDG 210
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD+V+W A++S Y+++ D +A+ +M G + + TS A + L
Sbjct: 211 IIWKDAVTWTAMVSCYSEN-DIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVL 269
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK IHG ++K T VG L+ Y+KC DA VF + +VI W+ +IS
Sbjct: 270 GKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQ 329
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E A +F M V PN+ + G++ A + + G+ IH L IK + SE V
Sbjct: 330 SYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFV 389
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
N L+ +YA+ +M++S ++F L +SWN +I GY Q+G + A+ F +
Sbjct: 390 GNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHV 449
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
TF SVL A A S+KH + HS I K ++D IV ++L+D Y K G I ++
Sbjct: 450 LSTQVTFSSVLRA--CANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDA 507
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+VF + +W AIIS A HG + F M +P+ +TF+++L+VCG
Sbjct: 508 LKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGST 567
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++++G LF+SM D+ I+PS DHY+C+V +LGR GRL +A + +G IP P V ++
Sbjct: 568 GLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRA 627
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL +C +H NV +G+ A+ ++++EP +YVL+SN+YA G + VA+LRK M++ GV
Sbjct: 628 LLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGV 687
Query: 592 RKEVGFSWADV-GDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
+KEVG SW ++ G++ H FS G HP I M E +LN K R
Sbjct: 688 KKEVGLSWVEIKGEV---HAFSVGSADHPDMRIINAMLE-------WLNLKASR 731
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 211/428 (49%), Gaps = 11/428 (2%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNALITMYSRWGRLVEAR 112
D+ + L C+ G +H+ +V+ G + + N L+ +Y++ G L AR
Sbjct: 45 LDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAAR 104
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
R+FD MP ++ VS+ ++ GY G + EA + R+G ++H T+
Sbjct: 105 RLFDGMPERNMVSFVTLVQGYALRGGFE-EAAGLFRRLQREGHEVNHFVLTTILKVLVAM 163
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
L IH + K+G+ + VG+ L+ YS C A VF + ++ ++WT M+
Sbjct: 164 DAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMV 223
Query: 233 SMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S EDA++ F +MR+ G PN ++ A + G+ IHG +KT
Sbjct: 224 SCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCD 283
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+EP V L+ MYA+ ++D+ VF+ + ++I W+ LIS YAQ+ + A + F +
Sbjct: 284 TEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRM 343
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++ S PN ++ VL A + L GQ+ H+ +IK+G +S+ VG+AL+D+Y K
Sbjct: 344 MRSSVVPNEFSLSGVLQACANVAFLDL--GQQIHNLVIKLGYESELFVGNALMDVYAKCR 401
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
++ S +F ++ +E +W II + G E ++ F+EM V +TF SVL
Sbjct: 402 NMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLR 461
Query: 467 VCGRNGMI 474
C I
Sbjct: 462 ACANTASI 469
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 207/634 (32%), Positives = 343/634 (54%), Gaps = 14/634 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY G A +F+ + D V WN ++ G+ K+ A+ M G +
Sbjct: 188 IKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNF 247
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + LS FG+QLH+L VK+GL+SEV V N L++MY++ L + ++F
Sbjct: 248 ATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGL 307
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D V+WN ++SG Q+G + +A+L +M + G+R D V+ S A
Sbjct: 308 MPRDDLVTWNGMISGCVQNG-FVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQ 366
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
GK++HG ++ V + + L+ Y KC A V+ +V+ +TMIS +
Sbjct: 367 GKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVL 426
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++AV +F+ + G+ PN V ++ A + +K G+ +H +K + V
Sbjct: 427 NGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYV 486
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ L+ MYA+ + S +F ++S ++ ++WN++IS +AQNG A+ F + E
Sbjct: 487 ESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGV 546
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
K + T SVL+A + I +G+ H +IK + +D SAL+DMYGK G++ +
Sbjct: 547 KYSNVTISSVLSACASLPAI--YYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWA 604
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
RVF EK+E +W +II++ +G + ++ + M+ +G + D +TFL++++ C
Sbjct: 605 HRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHA 664
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + +G LF M ++Y I P +H++CMVD+ R G+L++A EL+ +P P + +
Sbjct: 665 GQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGA 724
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACR+H NVE+ E + L K++P SG YVLMSN+ A G W+ V+ +R+ MK V
Sbjct: 725 LLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKV 784
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+K G+SW DV + H F + D +HP SE+IY
Sbjct: 785 QKIPGYSWVDVNNTS--HLFVAADKSHPDSEDIY 816
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 157/535 (29%), Positives = 278/535 (51%), Gaps = 18/535 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN---PDIVSWNTVLSGFEKSDD---ALSFALRM--NLIG 52
+ MY + +F A+ +F++L + WN ++ G + D AL F L+M +
Sbjct: 82 VGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSA 141
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
+ D+ T+ + C G +H GLD +++VG+ALI MY+ G L +AR
Sbjct: 142 PLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDAR 201
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+VFD M +D V WN ++ GY + G A+ +M G + + S E
Sbjct: 202 QVFDGMAERDCVLWNVMMDGYVKAGSVS-SAVELFGDMRASGCEPNFATLACFLSVSATE 260
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+L G Q+H +++K G + V+V N L+S Y+KC+ D K+F M ++++W MI
Sbjct: 261 SDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMI 320
Query: 233 SMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S ++ A+ LF +M+ G+ P+ VT + L+ A++ N +G+ +HG ++
Sbjct: 321 SGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVH 380
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + + L+ +Y + +++ ++ V+D +++ + +ISGY NG+S AV+ F +
Sbjct: 381 MDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYL 440
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+++ +PNA SVL A A ++K GQ HS+ +K + V SAL+DMY K G
Sbjct: 441 LEQGIRPNAVAIASVLPA--CASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCG 498
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ S +F++ K E W ++IS+ A++G+ E +N F+EM +GV+ ++T SVL+
Sbjct: 499 RLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLS 558
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
C I+ G+ + ++K I S ++DM G+ G LE A + +P
Sbjct: 559 ACASLPAIYYGKEIHGVVIKG-PIRADLFAESALIDMYGKCGNLEWAHRVFESMP 612
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 215/646 (33%), Positives = 352/646 (54%), Gaps = 17/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS---FALRMNLIGVVFDA 57
+N+Y K + A +F+ + + ++W T++ G + +D S A M +G F+
Sbjct: 120 VNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNE 179
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S L C E + G Q+H ++K G D +V+VG +LI+MYSR G L A +V+
Sbjct: 180 HTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSN 239
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD N ++S Y + G G +AI + ++ GL + +FT+ SAC + ++E+
Sbjct: 240 LAYKDVRCLNFMISEYGKAG-CGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEV 298
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
+ +HG+ IK G G +SVGN ++S Y K + +A K F M +RN++SWT ++S
Sbjct: 299 LRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVK 358
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N + A+ F ++ GV + F L+ S + G IHG +K ++ + SV
Sbjct: 359 NGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSV 418
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK--E 350
LI +YA+ ++ + VF L + I+S+NA++SGY G A F ++ +
Sbjct: 419 GTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYI--GADEEDAMALFSQLRLAD 476
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP++ TF +L+ +A+ L G+ H++IIK G +++P VG+A++ MY K GSI +
Sbjct: 477 IKPDSVTFARLLSL--SADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGD 534
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ ++F +W A+ISA A HG + F+EM+ + PD IT LSVL C
Sbjct: 535 ACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSY 594
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G++ +G LF+ M Y I+P +H++CMVD+LGR G L EA + + P + +
Sbjct: 595 SGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWR 654
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+L+ C++HG++ G+ + L+ + P +GSY+L+SNLYA G A +R M
Sbjct: 655 TLVHVCKLHGDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLK 714
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V KE G SW ++ + +H F + D HP S+EIY + L SEMK
Sbjct: 715 VSKEAGSSWIEID--NKVHQFVASDKDHPESKEIYAKLDLLKSEMK 758
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 242/451 (53%), Gaps = 13/451 (2%)
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
+ G +H+ + K G ++ + GN L+ +Y ++ +L +A+ VFDEM +++++W ++ G
Sbjct: 94 LMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKG 153
Query: 133 YTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
+ Q D VE++ + EM G + + + AC +NL G+QIHG IK G+
Sbjct: 154 HLQVND--VESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFD 211
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEM 246
V VG L+S YS+C G A KV+ + ++V MIS E A+ +F +
Sbjct: 212 EDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHL 271
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
G+ PND TF +I A + V+ R++HG+CIK E SV N ++++Y + +
Sbjct: 272 LGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGML 331
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAV 365
+++EK F + R ++SW AL+SGY +NG A++ F +++ ++ F ++L+
Sbjct: 332 EEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLD-- 389
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
G +E +L G + H ++K+G D VG+AL+D+Y K + ++ VF+ +K+ +
Sbjct: 390 GCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVS 449
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
+ AI+S D E M F ++ ++PDS+TF +L++ + KG+ L ++
Sbjct: 450 FNAILSGYIG-ADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYII 508
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
K E +P + ++ M + G + +A +L
Sbjct: 509 KT-GFEANPSVGNAVITMYAKCGSIGDACQL 538
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 158/302 (52%), Gaps = 10/302 (3%)
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+L LG+ IH K+GY GN L++ Y K GDA VF M RN I+WTT+I
Sbjct: 93 DLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIK 152
Query: 234 --MNREDAVSLF---KEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFL 287
+ D S+F +EM G N+ T ++ A S+ NLV+ G IHG IK F
Sbjct: 153 GHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVR-GEQIHGFVIKRGFD 211
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ V LI+MY+R + +EKV+ L+ +++ N +IS Y + G A+ F +
Sbjct: 212 EDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHL 271
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ +PN YTF +V++A DI ++ + H IK G + VG+A++ +Y K G
Sbjct: 272 LGSGLEPNDYTFTNVISACNG--DIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHG 329
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ E+++ F E++ +WTA++S ++G+ + + F ++ GV DS F ++L
Sbjct: 330 MLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLD 389
Query: 467 VC 468
C
Sbjct: 390 GC 391
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
GQ H+ + K+G +D G+ L+++YGK + ++Q VF+E ++ WT +I +
Sbjct: 97 GQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQ 156
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
D ESV +EM G + T +L C + +G + ++K E D
Sbjct: 157 VNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDE---D 213
Query: 496 HY--SCMVDMLGRVGRLEEAEELVGQI 520
+ + ++ M R G L AE++ +
Sbjct: 214 VFVGTSLISMYSRCGDLGAAEKVYSNL 240
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 216/658 (32%), Positives = 348/658 (52%), Gaps = 31/658 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY A F+ L ++ SW +++ F +S + L RM GV DA
Sbjct: 86 VSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDA 145
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ TAL C D E G+++H ++V L+ + V NAL+ MY + G L A+RVF +
Sbjct: 146 VTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAK 205
Query: 118 MP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M ++ +SW+ + + G+ EA+ M+ G++ + + SAC ++
Sbjct: 206 MERTRNVISWSIMAGAHALHGNVW-EALRHFRFMLLLGIKATKSAMVTILSACSSPALVQ 264
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD--RNVISWTTMISM 234
G+ IH G+ + + V N +M+ Y +C +A KVF M + R+V+SW M+S
Sbjct: 265 DGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSA 324
Query: 235 -----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+DA+ L++ M+L + VT++ L+ A S V GR++H +
Sbjct: 325 YVHNDRGKDAIQLYQRMQLRA---DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKN 381
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF---- 345
V N L++MYA+ S ++ VFD++ R IISW +IS Y + L A F
Sbjct: 382 VIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLE 441
Query: 346 ----GVIKESKPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLD 400
G + KP+A F ++LNA D+S L+ G+ GL SD VG+A+++
Sbjct: 442 LEKNGSSQRVKPDALAFVTILNACA---DVSALEQGKMVSEQAASCGLSSDKAVGTAVVN 498
Query: 401 MYGKRGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
+YGK G I E +R+F+ + + W A+I+ A+ G + F ME +GVRPDS
Sbjct: 499 LYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSF 558
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDY-HIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
+F+S+L C G+ +G+ F SM +Y ++ + H+ C+ D+LGR GRL+EAEE +
Sbjct: 559 SFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLE 618
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEM 578
++P P SLL ACR H +++ + +A+ L+++EP + YV +SN+YAE W
Sbjct: 619 KLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHA 678
Query: 579 VAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
VA +RK M +GV+KE G S ++G +H F++GD+ HPR+ EI L S+MK
Sbjct: 679 VAKVRKFMAEQGVKKERGVSTIEIGKY--MHDFATGDDAHPRNREIREELAKLHSQMK 734
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 264/518 (50%), Gaps = 23/518 (4%)
Query: 33 SGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSE 91
+ ++SD A S L + V + TY+ L C + G ++HSL VK L
Sbjct: 20 ASLDRSDIA-SAVLDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGN 78
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
+ +GN +++MY+ +A+ FD + ++ SW +++ + G E + AL M
Sbjct: 79 LILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQ-SKETLRALERMR 137
Query: 152 RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
+ G+R D V+F +A +CG ++L G +IH + + V N L++ Y KC
Sbjct: 138 QDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLS 197
Query: 212 DANKVFRRM-HDRNVISWTTM-----ISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI 265
A +VF +M RNVISW+ M + N +A+ F+ M L G+ + ++ A
Sbjct: 198 HAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSAC 257
Query: 266 SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL--SCREIIS 323
S LV++GR+IH + F SE V N ++TMY R +++++ KVFD + + R+++S
Sbjct: 258 SSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVS 317
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
WN ++S Y N A+Q + + + + + T+ S+L+A +AED+ L G+ H I
Sbjct: 318 WNIMLSAYVHNDRGKDAIQLYQRM--QLRADKVTYVSLLSACSSAEDVGL--GRVLHKQI 373
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH---GDYE 440
+ L+ + IVG+AL+ MY K GS E++ VF++ +++S +WT IISA R +
Sbjct: 374 VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEAC 433
Query: 441 SVMNQFKEMENKG----VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
+ Q E+E G V+PD++ F+++L C + +G+ + +
Sbjct: 434 HLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGK-MVSEQAASCGLSSDKAV 492
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+ +V++ G+ G +EE + + P + + +++
Sbjct: 493 GTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIA 530
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-DSDPIVGSALLDMYGKRGSIFESQRVF 415
T+ +L A+ +L G++ HS +K L + I+G+ ++ MY S +++ F
Sbjct: 45 TYARLLQRCARAQ--ALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAF 102
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ ++++ ++WT +++A A G + + + M GVRPD++TF++ L CG +
Sbjct: 103 DALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLR 162
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
G + M+ D +E P + +++M + G L A+ + ++ + + GA
Sbjct: 163 DGIRIHQ-MVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGA 221
Query: 536 CRIHGNV 542
+HGNV
Sbjct: 222 HALHGNV 228
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 207/637 (32%), Positives = 343/637 (53%), Gaps = 20/637 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ +Y +G A +F+ L D + WN +L G+ KS D+A+ M + ++
Sbjct: 154 IKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNS 213
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY+ LS C F G QLH L++ G + + V N L+ MYS+ G L+ AR++F+
Sbjct: 214 VTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNT 273
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D+V+WN +++GY Q+G + EA M+ G++ D V+F S + +L
Sbjct: 274 MPQTDTVTWNGLIAGYVQNG-FTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRH 332
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
K++H ++ V + + L+ Y K A K+F++ +V T MIS
Sbjct: 333 CKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVL 392
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+N DA++ F+ + +G+ N +T ++ A + +K G+ +H +K + +
Sbjct: 393 HGLNI-DAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVN 451
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + + MYA+ + + + F +S R+ + WN++IS ++QNG A+ F ++
Sbjct: 452 VGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLF----RQM 507
Query: 352 KPNAYTFGSVLNAVGAAEDISLK---HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ F SV + + +L +G+ H ++I+ SD V S L+DMY K G++
Sbjct: 508 GMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNL 567
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ VFN K+E +W +II+A HG ++ + EM G+ PD +TFL +++ C
Sbjct: 568 ALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISAC 627
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G G++ +G H F M ++Y I +HY+CMVD+ GR GR+ EA + + +P P V
Sbjct: 628 GHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGV 687
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LLGACR+HGNVE+ + + L++++P SG YVL+SN++A+ G+W V +R MK
Sbjct: 688 WGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKE 747
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
KGV+K G+SW DV G H FS+ D HP S EIY
Sbjct: 748 KGVQKIPGYSWIDVN--GGTHMFSAADGNHPESVEIY 782
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 253/524 (48%), Gaps = 17/524 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ +Y G+F A +F L + WN ++ G D AL F +M V D
Sbjct: 53 LGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDK 112
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + C + +H G +++ G+ALI +Y+ G + +ARRVFDE
Sbjct: 113 YTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDE 172
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P +D++ WN +L GY + GD+ AI EM ++ V++T S C N
Sbjct: 173 LPLRDTILWNVMLRGYVKSGDFD-NAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCA 231
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
G Q+HG+ I G+ V N L++ YSKC A K+F M + ++W +I+
Sbjct: 232 GTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQ 291
Query: 236 ---REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++A LF M GV P+ VTF + +I ++ + +H ++ + +
Sbjct: 292 NGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYL 351
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
+ LI +Y + ++ + K+F + ++ A+ISGY +GL++ A+ F +I+E
Sbjct: 352 KSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGM 411
Query: 353 -PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
N+ T SVL A A +LK G+ H HI+K L++ VGSA+ DMY K G + +
Sbjct: 412 VTNSLTMASVLPACAAVA--ALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLA 469
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
F ++ W ++IS+ +++G E ++ F++M G + DS++ S L+
Sbjct: 470 YEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANL 529
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEA 513
++ G+ + ++++ S D + S ++DM + G L A
Sbjct: 530 PALYYGKEMHGYVIRNAF---SSDTFVASTLIDMYSKCGNLALA 570
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 218/445 (48%), Gaps = 10/445 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ ++ G+ + ++ +Y GR +A +F E+ + ++ WN ++ G G
Sbjct: 32 QVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLG 91
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ A+L +M+ + D +F ACG N+ L +H + +G+ + G
Sbjct: 92 WFDF-ALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAG 150
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVC 252
+ L+ Y+ DA +VF + R+ I W M+ S + ++A+ F EMR
Sbjct: 151 SALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSM 210
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
N VT+ ++ + G +HGL I + F +P V N L+ MY++ ++ + K+
Sbjct: 211 VNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKL 270
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
F+ + + ++WN LI+GY QNG + A F +I KP++ TF S L ++ E
Sbjct: 271 FNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSI--LESG 328
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SL+H + HS+I++ + D + SAL+D+Y K G + ++++F + TA+IS
Sbjct: 329 SLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMIS 388
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
HG +N F+ + +G+ +S+T SVL C + G+ L +LK +E
Sbjct: 389 GYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKK-RLE 447
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEEL 516
+ S + DM + GRL+ A E
Sbjct: 448 NIVNVGSAITDMYAKCGRLDLAYEF 472
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 169/379 (44%), Gaps = 15/379 (3%)
Query: 151 MRKGLRLDHVS--FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
M K LD ++ S AC ++ +Q+H I G G + + ++ Y C
Sbjct: 1 MAKPETLDSLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCG 60
Query: 209 VTGDANKVFRRMHDRNVISWTTMIS----MNREDAVSLFK-EMRLDGVCPNDVTFIGLIH 263
DA +F + R + W MI + D LF +M V P+ TF +I
Sbjct: 61 RFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIK 120
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
A N V ++H F + + LI +YA ++D+ +VFDEL R+ I
Sbjct: 121 ACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTIL 180
Query: 324 WNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
WN ++ GY ++G A+ F + S N+ T+ +L+ + G + H
Sbjct: 181 WNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCA--GTQLHGL 238
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
+I G + DP V + L+ MY K G++ ++++FN + W +I+ ++G +
Sbjct: 239 VIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEA 298
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCM 500
F M + GV+PDS+TF S L +G + + + +++ H P D Y S +
Sbjct: 299 APLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVR--HRVPF-DVYLKSAL 355
Query: 501 VDMLGRVGRLEEAEELVGQ 519
+D+ + G +E A ++ Q
Sbjct: 356 IDVYFKGGDVEMARKIFQQ 374
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 214/647 (33%), Positives = 353/647 (54%), Gaps = 17/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+N+Y K G A +F+ +IV WN +L GF ++D + + M + D
Sbjct: 369 INLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADD 428
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L C++ + G Q+H + +K +D++++V NA++ MYS+ G + A+ +F
Sbjct: 429 FTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSL 488
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P KDSVSWNA++ G + + EA+ L M G+ D VSF +A +AC + + E
Sbjct: 489 IPGKDSVSWNALIVGLAHNEEEE-EAVYMLKRMKCYGIAPDEVSFATAINACSNIRATET 547
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQIH SIK ++ +VG+ L+ YSK + KV + +++ +I+
Sbjct: 548 GKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQ 607
Query: 234 MNRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE-PS 291
NRED A+ LF+++ DG P++ TF ++ + G+ +H +K+ L++ S
Sbjct: 608 NNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTS 667
Query: 292 VCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIK- 349
+ L+ +Y + + ++D+ K+ E+ + ++ W A ISGYAQNG S ++ F+ +
Sbjct: 668 LGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSH 727
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ + + TF SVL A +E +L G+ H IIK G S SAL+DMY K G +
Sbjct: 728 DVRSDEATFASVLKA--CSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVI 785
Query: 410 ESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S +F E + K W ++I A++G + F++M+ ++PD +T L VL C
Sbjct: 786 SSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIAC 845
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G+I +GR+LFDSM + Y I P DHY+C++D+LGR G L+EA+E++ Q+P +
Sbjct: 846 SHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVI 905
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+ L AC++H + E G+ A L++MEP S +YV +S+L+A G+W + R+ M+
Sbjct: 906 WATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMRE 965
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
KGV K G SW VG+ L F D HP + IY+M + L M
Sbjct: 966 KGVMKFPGCSWITVGNKTNL--FVVQDTHHPDTLGIYKMLDDLTGMM 1010
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 152/524 (29%), Positives = 265/524 (50%), Gaps = 15/524 (2%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTAL 64
G+ A + + P V+WN V+S + +S + M G++ T+++ L
Sbjct: 275 GRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASML 334
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
S F G Q+H+ VK GLD+ V+VG++LI +Y + G + +A++VFD K+ V
Sbjct: 335 SAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIV 394
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
WNA+L G+ Q+ D E I M R L D +F S AC + +L++G+Q+H +
Sbjct: 395 MWNAMLYGFVQN-DLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCI 453
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDA 239
+IK + V N ++ YSK A +F + ++ +SW +I + E+A
Sbjct: 454 TIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEA 513
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
V + K M+ G+ P++V+F I+A S + G+ IH IK N S +V + LI +
Sbjct: 514 VYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDL 573
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
Y++F ++ S KV + ++ NALI+G QN A++ F V+K+ KP+ +TF
Sbjct: 574 YSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTF 633
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
S+L+ G +S G++ HS+ +K L+ D +G +L+ +Y K + ++ ++ E
Sbjct: 634 ASILS--GCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAE 691
Query: 418 TQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
+ K+ WTA IS A++G + + F M + VR D TF SVL C +
Sbjct: 692 VPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTD 751
Query: 477 GRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
G+ + ++K + S ++DM + G + + E+ ++
Sbjct: 752 GKEIHGLIIKSGFVS-YETAASALMDMYSKCGDVISSFEIFKEL 794
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 222/477 (46%), Gaps = 47/477 (9%)
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
IG D + LS C G Q+H ++K G S + L+ MY++ + +
Sbjct: 154 IGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKD 213
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASAC 169
ARRVFD + D++ W ++++GY + G Y + LAL M K G D V++ +
Sbjct: 214 ARRVFDGIACPDTICWASMIAGYHRVGRY--QQALALFSRMEKMGSAPDQVTYVT----- 266
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
++ST + DA + +R+ + ++W
Sbjct: 267 ------------------------------IISTLASMGRLSDARTLLKRIQMPSTVAWN 296
Query: 230 TMISMNREDAVS-----LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
+IS + + L+K+M+ G+ P TF ++ A + EG+ IH +K
Sbjct: 297 AVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKH 356
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
+ V + LI +Y + + D++KVFD + + I+ WNA++ G+ QN L +Q F
Sbjct: 357 GLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMF 416
Query: 345 -FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + + + +TF SVL A + SL G++ H IK +D+D V +A+LDMY
Sbjct: 417 QYMRRADLEADDFTFVSVLGACINLD--SLDIGRQVHCITIKNSMDADLFVANAMLDMYS 474
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G+I ++ +F+ K +W A+I LA + + E + K M+ G+ PD ++F +
Sbjct: 475 KLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFAT 534
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ C G+ + + +K Y++ + S ++D+ + G +E + +++ +
Sbjct: 535 AINACSNIRATETGKQIHCASIK-YNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHV 590
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 220/492 (44%), Gaps = 76/492 (15%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
FDA + T H+ G+ LH+ +++ GL +G+AL+ +Y R GR+ A R
Sbjct: 62 FDATPHRT-------HQARACGV-LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRA 113
Query: 115 FD--EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR--KGLRLDHVSFTSAASACG 170
+ +++LS + + G +L + +R G D SAC
Sbjct: 114 LGCCTGAPASGAAASSVLSCHARSG--SPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACS 171
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
LE G+Q+H +K G+ + L+ Y+KC DA +VF + + I W +
Sbjct: 172 RLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWAS 231
Query: 231 MIS----MNR-EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MI+ + R + A++LF M G P+ VT++ + I L GR
Sbjct: 232 MIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTI-----ISTLASMGR---------- 276
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ D+ + + ++WNA+IS Y+Q+GL F
Sbjct: 277 --------------------LSDARTLLKRIQMPSTVAWNAVISSYSQSGLE----SEVF 312
Query: 346 GVIKESK-----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
G+ K+ K P TF S+L+A AA + GQ+ H+ +K GLD++ VGS+L++
Sbjct: 313 GLYKDMKRQGLMPTRSTFASMLSA--AASMTAFDEGQQIHAAAVKHGLDANVFVGSSLIN 370
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
+Y K G I ++++VF+ + EK+ W A++ ++ E + F+ M + D T
Sbjct: 371 LYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFT 430
Query: 461 FLSVLTVCGRNGMIHKGRHLF-----DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
F+SVL C + GR + +SM D + + M+DM ++G ++ A+
Sbjct: 431 FVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVA------NAMLDMYSKLGAIDVAKA 484
Query: 516 LVGQIPGGPGLS 527
L IPG +S
Sbjct: 485 LFSLIPGKDSVS 496
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ + VL+A +L+ G++ H ++K G S + L+DMY K + +++
Sbjct: 158 PDQFGLAVVLSACSRLG--ALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDAR 215
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
RVF+ W ++I+ R G Y+ + F ME G PD +T++++++ G
Sbjct: 216 RVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMG 275
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG---PGLSVL 529
+ R ++LK + PS ++ ++ + G E L + P S
Sbjct: 276 RLSDAR----TLLKRIQM-PSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTF 330
Query: 530 QSLLGACRIHGNVEMGERIADALMK 554
S+L A + G++I A +K
Sbjct: 331 ASMLSAAASMTAFDEGQQIHAAAVK 355
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 212/645 (32%), Positives = 348/645 (53%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+ MY +G A F+ + D V WN ++ G+ K+ D A+ M + G +
Sbjct: 183 IKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNF 242
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + LS C L G+QLHSL VK GL+ EV V N L++MY++ L +A R+F+
Sbjct: 243 ATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFEL 302
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P D V+WN ++SG Q+G EA+ +M+R G R D V+ S A L+
Sbjct: 303 LPRDDLVTWNGMISGCVQNGLLD-EALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQ 361
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
GK++HG I+ + + L+ Y KC A ++ +V+ +T+IS +
Sbjct: 362 GKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVL 421
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N E A+ +F+ + + PN VT ++ A + + + G+ IHG ++ + + V
Sbjct: 422 NGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYV 481
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ L+ MYA+ + S +F ++S ++ ++WN++IS ++QNG A+ F + E
Sbjct: 482 ESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGI 541
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
K N T S L+A + I +G+ H IIK + +D SAL+DMY K G++ +
Sbjct: 542 KYNNVTISSALSACASLPAI--YYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELA 599
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
RVF +K+E +W +IISA HG + ++ M+ +G +PD +TFL++++ C
Sbjct: 600 LRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHA 659
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G LF M K+Y I P +H++CMVD+ R GRL++A + + +P P + +
Sbjct: 660 GLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGA 719
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACR+H NVE+ + + L K++P SG YVLMSN+ A G W+ V+ +R+ MK +
Sbjct: 720 LLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKI 779
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
K G+SW DV + H F + D +HP SE+IY + L E++
Sbjct: 780 LKIPGYSWVDVNNSS--HLFVASDKSHPESEDIYTSLKALLQELR 822
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 159/557 (28%), Positives = 283/557 (50%), Gaps = 19/557 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDI---VSWNTVLSGFEKSDD---ALSFALRM--NLIG 52
+ MY + +F A+ +F+ L + WN ++ GF + A+ F ++M +
Sbjct: 77 LGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAA 136
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
DA T + C G +H GL S+VYVG+ALI MYS G L +AR
Sbjct: 137 PSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDAR 196
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
FD MP +D V WN ++ GY + GD G A+ M G + + S C E
Sbjct: 197 DAFDGMPWRDCVLWNVMMDGYIKAGDVG-GAVRLFRNMRVSGCEPNFATLACFLSVCAAE 255
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+L G Q+H +++K G V+V N L+S Y+KC DA ++F + ++++W MI
Sbjct: 256 ADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMI 315
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S + +A+ LF +M G P+ VT + L+ A++ N +K+G+ +HG I+
Sbjct: 316 SGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVH 375
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + + L+ +Y + ++ + ++D +++ + +ISGY NG+S A+Q F +
Sbjct: 376 MDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYL 435
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+++ KPNA T SVL A + + L GQ H ++++ + V SAL+DMY K G
Sbjct: 436 LEQCIKPNAVTVASVLPACASISALPL--GQEIHGYVLRNAYEGKCYVESALMDMYAKCG 493
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ S +F++ K E W ++IS+ +++G+ + ++ F++M +G++ +++T S L+
Sbjct: 494 RLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALS 553
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C I+ G+ + ++K I+ S ++DM + G +E A + +P +
Sbjct: 554 ACASLPAIYYGKEIHGVIIKG-PIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEV 612
Query: 527 SVLQSLLGACRIHGNVE 543
S S++ A HG V+
Sbjct: 613 S-WNSIISAYGAHGLVK 628
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 214/651 (32%), Positives = 356/651 (54%), Gaps = 25/651 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG------FEKSDDALSFALRMNLIGVV 54
+N Y K + A +F+ + D VSWNT+++G E S D L M G
Sbjct: 40 LNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRC---MRSCGFE 96
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D T+ + L F G Q+HS+I+K G VY G+AL+ MY++ +L +A
Sbjct: 97 LDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLS 156
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEK 173
F + ++VSWNA+++GY Q GD E L++ M ++G ++D ++
Sbjct: 157 FLSISKHNTVSWNAMINGYAQAGDR--ETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDAD 214
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMI 232
L Q+HG IK G ++ N L+++YSKC DA ++F R++++W +++
Sbjct: 215 FCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLL 274
Query: 233 SM----NRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ ++ED A L +M+ G P+ ++ +I A N+ GR +HGL IK F
Sbjct: 275 AAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFE 334
Query: 288 SEPSVCNCLITMYAR--FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ N LI+MY + + SM+++ +F+ L ++ +SWN++++G +Q G S AV++F
Sbjct: 335 QSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFL 394
Query: 346 GVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ + + Y+F +VL + L GQ+ H +K GL+S+ V S+L+ MY K
Sbjct: 395 HMRSAAMDIDHYSFSAVLRSCSDLATFQL--GQQIHVLALKYGLESNEFVSSSLIFMYSK 452
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G I +++R F E + S W A++ A+HG ++ F ME K V+ D ITF++V
Sbjct: 453 CGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAV 512
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
LT C G++ +G M DY + P +HY+C VD+ GR GRLEEA+ L+ ++P P
Sbjct: 513 LTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKP 572
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+V ++ LGACR GN+E+ ++A L++MEP +YVL+SN+Y W+ A +++
Sbjct: 573 DTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKR 632
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
MK +GV+K G+SW +V + +H F + D++HP ++IY + E L E+
Sbjct: 633 LMKERGVKKVPGWSWIEVN--NNVHAFIAQDHSHPSCQQIYFLLEVLLEEI 681
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 224/444 (50%), Gaps = 15/444 (3%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
HSL VK G ++VY N ++ Y + L A +FDEMP +DSVSWN +++G+ G+
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGN- 79
Query: 140 GVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+EA ++ MR G LD +F S LG+Q+H + IKMGY +V G+
Sbjct: 80 -LEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGS 138
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCP 253
L+ Y+KCE DA F + N +SW MI + +RE A L M +G
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+D T+ L+ + + +HG IK ++CN LIT Y++ S+ D++++F
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258
Query: 314 DELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
D + R++++WN+L++ Y A + + + +P+ Y++ S+++A E+I
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISAC-FNENI 317
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR--GSIFESQRVFNETQEKSEFAWTAI 429
S +G+ H +IK G + + +AL+ MY K GS+ E+ +F + K +W +I
Sbjct: 318 S-NNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSI 376
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
++ L++ G E + F M + + D +F +VL C G+ + LK Y
Sbjct: 377 LTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALK-YG 435
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEA 513
+E + S ++ M + G +E+A
Sbjct: 436 LESNEFVSSSLIFMYSKCGIIEDA 459
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 207/634 (32%), Positives = 343/634 (54%), Gaps = 14/634 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY G A +F+ + D V WN ++ G+ K+ A+ M G +
Sbjct: 188 IKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNF 247
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + LS FG+QLH+L VK+GL+SEV V N L++MY++ L + ++F
Sbjct: 248 ATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGL 307
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D V+WN ++SG Q+G + +A+L +M + G+R D V+ S A
Sbjct: 308 MPRDDLVTWNGMISGCVQNG-FVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQ 366
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
GK++HG ++ V + + L+ Y KC A V+ +V+ +TMIS +
Sbjct: 367 GKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVL 426
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++AV +F+ + G+ PN V ++ A + +K G+ +H +K + V
Sbjct: 427 NGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYV 486
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ L+ MYA+ + S +F ++S ++ ++WN++IS +AQNG A+ F + E
Sbjct: 487 ESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGV 546
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
K + T SVL+A + I +G+ H +IK + +D SAL+DMYGK G++ +
Sbjct: 547 KYSNVTISSVLSACASLPAI--YYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWA 604
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
RVF EK+E +W +II++ +G + ++ + M+ +G + D +TFL++++ C
Sbjct: 605 HRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHA 664
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + +G LF M ++Y I P +H++CMVD+ R G+L++A EL+ +P P + +
Sbjct: 665 GQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGA 724
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACR+H NVE+ E + L K++P SG YVLMSN+ A G W+ V+ +R+ MK V
Sbjct: 725 LLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKV 784
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+K G+SW DV + H F + D +HP SE+IY
Sbjct: 785 QKIPGYSWVDVNNTS--HLFVAADKSHPDSEDIY 816
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 157/535 (29%), Positives = 278/535 (51%), Gaps = 18/535 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN---PDIVSWNTVLSGFEKSDD---ALSFALRM--NLIG 52
+ MY + +F A+ +F++L + WN ++ G + D AL F L+M +
Sbjct: 82 VGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSA 141
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
+ D+ T+ + C G +H GLD +++VG+ALI MY+ G L +AR
Sbjct: 142 PLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDAR 201
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+VFD M +D V WN ++ GY + G A+ +M G + + S E
Sbjct: 202 QVFDGMAERDCVLWNVMMDGYVKAGSVS-SAVELFGDMRASGCEPNFATLACFLSVSATE 260
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+L G Q+H +++K G + V+V N L+S Y+KC+ D K+F M ++++W MI
Sbjct: 261 SDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMI 320
Query: 233 SMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S ++ A+ LF +M+ G+ P+ VT + L+ A++ N +G+ +HG ++
Sbjct: 321 SGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVH 380
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + + L+ +Y + +++ ++ V+D +++ + +ISGY NG+S AV+ F +
Sbjct: 381 MDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYL 440
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+++ +PNA SVL A A ++K GQ HS+ +K + V SAL+DMY K G
Sbjct: 441 LEQGIRPNAVAIASVLPA--CASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCG 498
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ S +F++ K E W ++IS+ A++G+ E +N F+EM +GV+ ++T SVL+
Sbjct: 499 RLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLS 558
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
C I+ G+ + ++K I S ++DM G+ G LE A + +P
Sbjct: 559 ACASLPAIYYGKEIHGVVIKG-PIRADLFAESALIDMYGKCGNLEWAHRVFESMP 612
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 207/630 (32%), Positives = 347/630 (55%), Gaps = 19/630 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + PD VSWN++L+ + DA M+ G+ +AL
Sbjct: 51 VFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGLTASTFALGSALRSAAAARR 110
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G QL S VK GL V+ +AL+ +Y++ GRL +ARRVFD MP +++VSWNA+++G
Sbjct: 111 PELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAG 170
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Y + +A+ +EM R L D +F + + L +Q+HG K G
Sbjct: 171 YAESRK-PAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSAL 229
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS------MNREDAVSLFKEM 246
+ V N ++ YS+C D+ ++F + R++ISW +M+ M+ E + M
Sbjct: 230 GLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMM 289
Query: 247 RLDGVCPNDVTFIGLIHAISI-GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
R GV P+ +F ++ S G ++GR IH L +K VCN +I MY RF
Sbjct: 290 RESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTE 349
Query: 306 ---MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVL 362
M+D+ K FD L ++ +SWN++++GY+ +GLS A++ FF ++ + F ++
Sbjct: 350 NCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALR-FFRFMRAENVSTDEF-ALS 407
Query: 363 NAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
A+ + D++ L+ G++ HS +I+ G S+ V S+L+ MY K G + ++++ F E +
Sbjct: 408 AALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKG 467
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
S W +++ A+HG ++V + F EM + V D +TF+++LT G++ +G +
Sbjct: 468 SSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEIL 527
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+SM Y I +HY+C VD+ GR G+L++A+EL+ +P P V +LLGACRIHGN
Sbjct: 528 NSMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGN 587
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
+E+ +A L EP +YVL+S++Y+ +G W A ++K MK++G+ K G+SW +
Sbjct: 588 MELASDVASHLFVAEPRQHSTYVLLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWIE 647
Query: 602 VGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
V + +H F++ D +HPR +EI+ M L
Sbjct: 648 VK--NEVHSFNADDRSHPRMDEIFDMLRML 675
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 199/398 (50%), Gaps = 15/398 (3%)
Query: 96 NALITMYSRWGR---LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR 152
N L+T YS G L ARRVFDE+P D+VSWN++L+ + G + +A L +M
Sbjct: 30 NQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHR-DAWRLLKDMHA 88
Query: 153 KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD 212
+GL + SA + + ELG Q+ ++K G +V + L+ Y+KC D
Sbjct: 89 RGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSD 148
Query: 213 ANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISI 267
A +VF M RN +SW +I S A+ LF EM+ + P+D TF L+ +
Sbjct: 149 ARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEG 208
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
+ + +HG K V N IT Y++ + DS ++FD + R++ISWN++
Sbjct: 209 PSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSM 268
Query: 328 ISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
+ YA +G+ A++ F +++ES +P+ Y+F SV++ V + + G+ HS ++K
Sbjct: 269 LGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVS-VCSEHGCDDRQGRSIHSLVVK 327
Query: 386 VGLDSDPIVGSALLDMYGKRGS---IFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
+GL+ V +A++ MY + + ++ + F+ K +W ++++ + HG
Sbjct: 328 IGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDA 387
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+ F+ M + V D + L C ++ GR +
Sbjct: 388 LRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQV 425
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 223/458 (48%), Gaps = 23/458 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+++Y K G+ A +F+ + + VSWN +++G+ K A+ L M + +V D
Sbjct: 137 LDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDD 196
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L+ + QLH I K+G + V NA IT YS+ G ++RR+FD
Sbjct: 197 ATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDG 256
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACG-HEKNL 175
+ ++D +SWN++L Y G EA+ + MMR+ G++ D SFTS S C H +
Sbjct: 257 IQSRDLISWNSMLGAYAYHG-MDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDD 315
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE---VTGDANKVFRRMHDRNVISWTTMI 232
G+ IH + +K+G V N +++ Y++ + DA K F + ++ +SW +M+
Sbjct: 316 RQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSML 375
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ DA+ F+ MR + V ++ + + S +++ GR +H L I++ F
Sbjct: 376 TGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFS 435
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S V + LI MY++ + D+ K F+E + WN+++ GYAQ+G + F +
Sbjct: 436 SNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEM 495
Query: 348 IKESKP-NAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ P + TF ++L A G ++ S + I + ++ + +D+YG
Sbjct: 496 LDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEH----YACGVDLYG 551
Query: 404 KRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ G + +++ + + W ++ A HG+ E
Sbjct: 552 RAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNME 589
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 214/651 (32%), Positives = 356/651 (54%), Gaps = 25/651 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG------FEKSDDALSFALRMNLIGVV 54
+N Y K + A +F+ + D VSWNT+++G E S D L M G
Sbjct: 40 LNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRC---MRSCGFE 96
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D T+ + L F G Q+HS+I+K G VY G+AL+ MY++ +L +A
Sbjct: 97 LDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLS 156
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEK 173
F + ++VSWNA+++GY Q GD E L++ M ++G ++D ++
Sbjct: 157 FLSISKHNTVSWNAMINGYAQAGDR--ETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDAD 214
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMI 232
L Q+HG IK G ++ N L+++YSKC DA ++F R++++W +++
Sbjct: 215 FCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLL 274
Query: 233 SM----NRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ ++ED A L +M+ G P+ ++ +I A N+ GR +HGL IK F
Sbjct: 275 AAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFE 334
Query: 288 SEPSVCNCLITMYAR--FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ N LI+MY + + SM+++ +F+ L ++ +SWN++++G +Q G S AV++F
Sbjct: 335 QSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFL 394
Query: 346 GVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ + + Y+F +VL + L GQ+ H +K GL+S+ V S+L+ MY K
Sbjct: 395 HMRSAAMDIDHYSFSAVLRSCSDLATFQL--GQQIHVLALKYGLESNEFVSSSLIFMYSK 452
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G I +++R F E + S W A++ A+HG ++ F ME K V+ D ITF++V
Sbjct: 453 CGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAV 512
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
LT C G++ +G M DY + P +HY+C VD+ GR GRLEEA+ L+ ++P P
Sbjct: 513 LTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKP 572
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+V ++ LGACR GN+E+ ++A L++MEP +YVL+SN+Y W+ A +++
Sbjct: 573 DTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKR 632
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
MK +GV+K G+SW +V + +H F + D++HP ++IY + E L E+
Sbjct: 633 LMKERGVKKVPGWSWIEVN--NNVHAFIAQDHSHPSCQQIYFLLEVLLEEI 681
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 224/444 (50%), Gaps = 15/444 (3%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
HSL VK G ++VY N ++ Y + L A +FDEMP +DSVSWN +++G+ G+
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGN- 79
Query: 140 GVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+EA ++ MR G LD +F S LG+Q+H + IKMGY +V G+
Sbjct: 80 -LEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGS 138
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCP 253
L+ Y+KCE DA F + N +SW MI + +RE A L M +G
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+D T+ L+ + + +HG IK ++CN LIT Y++ S+ D++++F
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258
Query: 314 DELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
D + R++++WN+L++ Y A + + + +P+ Y++ S+++A E+I
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISAC-FNENI 317
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR--GSIFESQRVFNETQEKSEFAWTAI 429
S +G+ H +IK G + + +AL+ MY K GS+ E+ +F + K +W +I
Sbjct: 318 S-NNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSI 376
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
++ L++ G E + F M + + D +F +VL C G+ + LK Y
Sbjct: 377 LTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALK-YG 435
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEA 513
+E + S ++ M + G +E+A
Sbjct: 436 LESNEFVSSSLIFMYSKCGIIEDA 459
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 212/654 (32%), Positives = 359/654 (54%), Gaps = 32/654 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+++Y G A+ +F + D+VSWN ++ +S D AL RM L GV
Sbjct: 170 LHIYGSCGCVASAMLLFERMER-DLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPAR 228
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T LS C +HS++ + GL+ + V AL + Y+R G L +A+ VFD
Sbjct: 229 ITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDR 285
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+D VSWNA+L Y Q G EA L M+ +G+ V+ +A++ C +L
Sbjct: 286 AAERDVVSWNAMLGAYAQHGHMS-EAALLFARMLHEGIPPSKVTLVNASTGC---SSLRF 341
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+ IH +++ G + +GN L+ Y++C +A +F + N +SW TMI+ + +
Sbjct: 342 GRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQ 400
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISI----GNLVKEGRMIHGLCIKTNFLS 288
A+ LF+ M+L+G+ P T++ L+ A++ + EGR +H + + S
Sbjct: 401 KGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYAS 460
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCRE---IISWNALISGYAQNGLSLAAVQAFF 345
EP++ ++ MYA ++ ++ F + + ++SWNA+IS +Q+G A+ F
Sbjct: 461 EPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFR 520
Query: 346 GV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ + PN T +VL+A A +L G H H+ G++S+ V +AL MYG+
Sbjct: 521 RMDLHGVAPNQITCVAVLDACAGA--AALTEGVIVHDHLRHSGMESNVFVATALASMYGR 578
Query: 405 RGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
GS+ ++ +F + E+ + A+I+A +++G + F M+ +G RPD +F+S
Sbjct: 579 CGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVS 638
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL+ C G+ +G +F SM + Y I PS DHY+C VD+LGR G L +AEEL+ +
Sbjct: 639 VLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVK 698
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMK-MEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
P + V ++LLGACR + +V+ G R+A+++++ ++P +YV++SN+ A G W+ A +
Sbjct: 699 PTVLVWKTLLGACRKYRDVDRG-RLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEV 757
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
R M+S+G+RK+ G SW ++ +H F +GD +HPRSEEIYR E L +E++
Sbjct: 758 RTEMESRGLRKQAGKSWIEIK--SRVHEFVAGDRSHPRSEEIYRELERLHAEIR 809
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/550 (26%), Positives = 267/550 (48%), Gaps = 26/550 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+ +Y K +F+ L D SW T+++ + ++ A+ RM GV DA
Sbjct: 69 LRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDA 128
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ L C G +H+ IV+ GL+ + + N L+ +Y G + A +F+
Sbjct: 129 VTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFER 188
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M +D VSWNA ++ Q GD ++ L L + M+ +G+R ++ S C +
Sbjct: 189 M-ERDLVSWNAAIAANAQSGD--LDMALELFQRMQLEGVRPARITLVITLSVCA---KIR 242
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
+ IH + + G + V L S Y++ A +VF R +R+V+SW M+
Sbjct: 243 QARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYA 302
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +A LF M +G+ P+ VT L++A + + ++ GRMIH ++ +
Sbjct: 303 QHGHMSEAALLFARMLHEGIPPSKVT---LVNASTGCSSLRFGRMIHACALEKGLDRDIV 359
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ N L+ MY R S +++ +F+ + +SWN +I+G +Q G A++ F + E
Sbjct: 360 LGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEG 418
Query: 352 -KPNAYTFGSVLNAVGA--AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
P T+ ++L AV + E ++ G++ HS I+ G S+P +G+A++ MY G+I
Sbjct: 419 MAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAI 478
Query: 409 FESQRVFNETQEKSE---FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
E+ F + +W AIIS+L++HG + + F+ M+ GV P+ IT ++VL
Sbjct: 479 DEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVL 538
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
C + +G + D L+ +E + + + M GR G LE A E+ ++
Sbjct: 539 DACAGAAALTEGVIVHDH-LRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERD 597
Query: 526 LSVLQSLLGA 535
+ + +++ A
Sbjct: 598 VVIFNAMIAA 607
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 229/448 (51%), Gaps = 24/448 (5%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G ++H+ IV GL+ E+ GN L+ +Y + L + VF + +D SW I++ YT+
Sbjct: 48 GRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTE 105
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
G AI M ++G+R D V+F + AC +L G+ IH ++ G
Sbjct: 106 HGQ-AKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSV 164
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDG 250
+ N+L+ Y C A +F RM +R+++SW I+ N + A+ LF+ M+L+G
Sbjct: 165 LANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEG 223
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V P +T L+ +S+ +++ R IH + ++ V L + YAR + ++
Sbjct: 224 VRPARIT---LVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAK 280
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAED 370
+VFD + R+++SWNA++ YAQ+G A F ++ E P + +++NA
Sbjct: 281 EVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKV--TLVNASTGCS- 337
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
SL+ G+ H+ ++ GLD D ++G+ALLDMY + GS E++ +F E + +W +I
Sbjct: 338 -SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF-EGIPGNAVSWNTMI 395
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG----MIHKGRHLFDSMLK 486
+ ++ G + + F+ M+ +G+ P T+L++L N + +GR L ++
Sbjct: 396 AGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVS 455
Query: 487 -DYHIEPSPDHYSCMVDMLGRVGRLEEA 513
Y EP+ + +V M G ++EA
Sbjct: 456 CGYASEPAIG--TAVVKMYASCGAIDEA 481
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
A +D L G+R H+ I+ +GL+ + +G+ LL +Y K S+ + + VF+ + + E +
Sbjct: 38 AAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRDEAS 95
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
WT II+A HG + + F M+ +GVR D++TFL+VL C R G + +GR +
Sbjct: 96 WTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 208/655 (31%), Positives = 351/655 (53%), Gaps = 15/655 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTY 60
+ K G+ KA +F+ + VSW ++ G+ +S +A M G+ D VT
Sbjct: 84 HLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL 143
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
T LS + E +Q+H+ ++K G + + V N+L+ Y + L A ++F M N
Sbjct: 144 VTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN 203
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
KD+V++N++++GY+ +G EAI +E+ G++ +F + SA + + G+Q
Sbjct: 204 KDTVTFNSLMTGYSNEG-LNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQ 262
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----N 235
+HG +K + +V VGN L+ YSK + + K+F M + + IS+ +I+
Sbjct: 263 VHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQ 322
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
+++ LF++++ F L+ + ++ GR IH I E V N
Sbjct: 323 FKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENA 382
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-N 354
L+ MYA+ ++++K+FD ++C+ + W A+IS Y Q G + F + + P +
Sbjct: 383 LVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPAD 442
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
TF S+L A ISL G++ HS +I+ G S+ GSALLD Y K G + ++ +
Sbjct: 443 QATFASILRACANLASISL--GRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKS 500
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F E E++ +W A+ISA A++G+ + +N F++M G +PDS++FLSVL+ C G +
Sbjct: 501 FGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFV 560
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+ F+SM + Y + P +HY+ MVD+L R GR +EAE+L+ ++P P + S+L
Sbjct: 561 EEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLN 620
Query: 535 ACRIHGNVEMGERIADALMKMEP-AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
+CRIH N E+ ++ AD L ME + Y+ MSN+YA G W+ VA ++K M+ +GVRK
Sbjct: 621 SCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRK 680
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+SW ++ H FS+ D +HP ++I R L EM+ K + AL
Sbjct: 681 VPAYSWVEIK--HQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCAL 733
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 238/457 (52%), Gaps = 17/457 (3%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
N +I+ + ++G+L +AR +FD M + +VSW ++ GY Q + EA +M R G+
Sbjct: 78 NMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQ-SNQSKEAFRLYADMRRGGI 136
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
D+V+ + S G + + QIH IK+GY ++ V N L+ Y K A++
Sbjct: 137 EPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQ 196
Query: 216 VFRRMHDRNVISWTTMIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN 269
+F+ M +++ +++ ++++ +N E+A+ LF E+ G+ P+D TF L+ A +
Sbjct: 197 LFKHMLNKDTVTFNSLMTGYSNEGLN-EEAIELFLELHNSGIKPSDFTFAALLSAAVGLD 255
Query: 270 LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALIS 329
K G+ +HG +KTNF+ V N L+ Y++ + + + K+F E+ + IS+N +I+
Sbjct: 256 DTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVIT 315
Query: 330 GYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
YA NG + F + + F ++L+ A ++L+ G++ H I VG
Sbjct: 316 SYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSI--ATSSLNLRMGRQIHCQAITVGA 373
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
+ + V +AL+DMY K E+Q++F+ KS WTA+ISA + G +E +N F +
Sbjct: 374 NFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSD 433
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGR 506
M GV D TF S+L C I GR L +++ + + Y S ++D +
Sbjct: 434 MRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMS---NVYSGSALLDTYAK 490
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
G + +A + G++P +S +L+ A +GNV+
Sbjct: 491 CGCMTDAIKSFGEMPERNSVS-WNALISAYAQNGNVD 526
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 236/457 (51%), Gaps = 26/457 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ YCK+ A +F ++ N D V++N++++G+ +++A+ L ++ G+
Sbjct: 182 VDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSD 241
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ LS + + FG Q+H ++K V+VGNAL+ YS+ ++ E ++F E
Sbjct: 242 FTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYE 301
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAA--SACGHEK 173
MP D +S+N +++ Y +G + ++ RK R D F A S
Sbjct: 302 MPELDGISYNVVITSYAWNGQFKES-----FDLFRKLQFTRFDRRQFPFATLLSIATSSL 356
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
NL +G+QIH +I +G V N L+ Y+KC +A K+F + ++ + WT MIS
Sbjct: 357 NLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMIS 416
Query: 234 M-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
E+ +++F +MR GV + TF ++ A + + GR +H L I++ F+S
Sbjct: 417 AYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMS 476
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ L+ YA+ M D+ K F E+ R +SWNALIS YAQNG + +F +I
Sbjct: 477 NVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMI 536
Query: 349 KES-KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ KP++ +F SVL+A G E+ +L H + I +V + ++++D+ +
Sbjct: 537 QSGYKPDSVSFLSVLSACSHCGFVEE-ALWHFNSM-TQIYEVTPKREHY--TSMVDVLCR 592
Query: 405 RGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G E++++ E E SE W++++++ H ++E
Sbjct: 593 NGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHE 629
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 102/230 (44%), Gaps = 38/230 (16%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVC--NCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ +I +KT F P+ C N + + + + +VFD++ + IS N +I
Sbjct: 24 LNSNHLIDAHIVKTGF--NPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMI 81
Query: 329 SGYAQNGLSLAAVQAFFGVIKES--------------------------------KPNAY 356
SG+ + G A + F G+++ + +P+
Sbjct: 82 SGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYV 141
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
T ++L+ G E ++ + H+H+IK+G + + +V ++L+D Y K ++ + ++F
Sbjct: 142 TLVTLLSGFGELETKNVI--VQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
K + ++++ + G E + F E+ N G++P TF ++L+
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLS 249
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 202/610 (33%), Positives = 332/610 (54%), Gaps = 23/610 (3%)
Query: 45 ALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR 104
A+ M G + Y L C++ +H + K G ++++V +L+ Y R
Sbjct: 66 AMTMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMR 125
Query: 105 WGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS 164
+ARR+FD MP ++ V+W A+++GYT + + + +EM+ G H + +
Sbjct: 126 CSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPAL-GLEVFVEMLEMGRYPSHYTLGA 184
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
+AC +++LGKQ+HG +IK G + S+GN L S Y+K A + F R+ ++N
Sbjct: 185 TLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKN 244
Query: 225 VISWTTMISMNRED------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
VI+WTTMIS ED +SLF +M +DGV PN+ T ++ + G+ +
Sbjct: 245 VITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQ 304
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ----- 333
K + V N + +Y R ++ ++F+++ II+WNA+ISGYAQ
Sbjct: 305 AFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSA 364
Query: 334 -NGLSLAA--VQAF--FGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
+ L + QA F +K S KP+ +TF S+L+ A ++L+ G++ H+ IK
Sbjct: 365 KDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAM--MALEQGEQIHAQTIKS 422
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
G SD +V SAL++MY K G I ++ + F E ++ WT++IS ++HG + + F
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLF 482
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
+EM GVRP+ ITF+S+L+ C G++ + H FD M K+Y IEP DHY CM+DM R
Sbjct: 483 EEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVR 542
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLM 566
+GR+E+A + + P ++ SL+ CR HGN+E+ AD L++++P G +Y+L+
Sbjct: 543 LGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILL 602
Query: 567 SNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
N+Y W+ VA +RK MK + V SW + D ++ F + D THP++ E+Y+
Sbjct: 603 LNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIK--DKVYFFRANDRTHPQATELYQ 660
Query: 627 MAECLGSEMK 636
+ E L + K
Sbjct: 661 LLENLLEKAK 670
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 240/480 (50%), Gaps = 29/480 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE-KSDDALSFALRMNLI--GVVFDA 57
+N Y + A +F+ + ++V+W +++G+ S AL + + ++ G
Sbjct: 120 VNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSH 179
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T L+ CL G Q+H +K+G +S +GN+L ++Y++ G L A R F
Sbjct: 180 YTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWR 239
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P K+ ++W ++S +D + + I+M+ G+ + + TS S CG +L L
Sbjct: 240 IPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNL 299
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+ S K+G T++ V N M Y + T +A ++F +M D ++I+W MIS
Sbjct: 300 GKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQ 359
Query: 234 ---MNRED---------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
++D A+++F++++ + P+ TF ++ S +++G IH
Sbjct: 360 IMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQT 419
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IK+ FLS+ V + L+ MY + +QD+ K F E+ R ++W ++ISGY+Q+G A+
Sbjct: 420 IKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAI 479
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SAL 398
Q F + + +PN TF S+L+A A L + ++K +P+V +
Sbjct: 480 QLFEEMRLAGVRPNEITFVSLLSACSYA---GLVEEAEHYFDMMKKEYCIEPVVDHYGCM 536
Query: 399 LDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVM---NQFKEMENKGV 454
+DM+ + G + ++ T E +E W+++++ HG+ E ++ E++ KG+
Sbjct: 537 IDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGI 596
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 208/655 (31%), Positives = 351/655 (53%), Gaps = 15/655 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTY 60
+ K G+ KA +F+ + VSW ++ G+ +S +A M G+ D VT
Sbjct: 84 HLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL 143
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
T LS + E +Q+H+ ++K G + + V N+L+ Y + L A ++F M N
Sbjct: 144 VTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN 203
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
KD+V++N++++GY+ +G EAI +E+ G++ +F + SA + + G+Q
Sbjct: 204 KDTVTFNSLMTGYSNEG-LNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQ 262
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----N 235
+HG +K + +V VGN L+ YSK + + K+F M + + IS+ +I+
Sbjct: 263 VHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQ 322
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
+++ LF++++ F L+ + ++ GR IH I E V N
Sbjct: 323 FKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENA 382
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-N 354
L+ MYA+ ++++K+FD ++C+ + W A+IS Y Q G + F + + P +
Sbjct: 383 LVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPAD 442
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
TF S+L A ISL G++ HS +I+ G S+ GSALLD Y K G + ++ +
Sbjct: 443 QATFASILRACANLASISL--GRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKS 500
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F E E++ +W A+ISA A++G+ + +N F++M G +PDS++FLSVL+ C G +
Sbjct: 501 FGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFV 560
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+ F+SM + Y + P +HY+ MVD+L R GR +EAE+L+ ++P P + S+L
Sbjct: 561 EEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLN 620
Query: 535 ACRIHGNVEMGERIADALMKMEP-AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
+CRIH N E+ ++ AD L ME + Y+ MSN+YA G W+ VA ++K M+ +GVRK
Sbjct: 621 SCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRK 680
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+SW ++ H FS+ D +HP ++I R L EM+ K + AL
Sbjct: 681 VPAYSWVEIK--HQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCAL 733
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 238/457 (52%), Gaps = 17/457 (3%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
N +I+ + ++G+L +AR +FD M + +VSW ++ GY Q + EA +M R G+
Sbjct: 78 NMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQ-SNQSKEAFRLYADMRRGGI 136
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
D+V+ + S G + + QIH IK+GY ++ V N L+ Y K A++
Sbjct: 137 EPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQ 196
Query: 216 VFRRMHDRNVISWTTMIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN 269
+F+ M +++ +++ ++++ +N E+A+ LF E+ G+ P+D TF L+ A +
Sbjct: 197 LFKHMLNKDTVTFNSLMTGYSNEGLN-EEAIELFLELHNSGIKPSDFTFAALLSAAVGLD 255
Query: 270 LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALIS 329
K G+ +HG +KTNF+ V N L+ Y++ + + + K+F E+ + IS+N +I+
Sbjct: 256 DTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVIT 315
Query: 330 GYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
YA NG + F + + F ++L+ A ++L+ G++ H I VG
Sbjct: 316 SYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSI--ATSSLNLRMGRQIHCQAITVGA 373
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
+ + V +AL+DMY K E+Q++F+ KS WTA+ISA + G +E +N F +
Sbjct: 374 NFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSD 433
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGR 506
M GV D TF S+L C I GR L +++ + + Y S ++D +
Sbjct: 434 MRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMS---NVYSGSALLDTYAK 490
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
G + +A + G++P +S +L+ A +GNV+
Sbjct: 491 CGCMTDAIKSFGEMPERNSVS-WNALISAYAQNGNVD 526
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 236/457 (51%), Gaps = 26/457 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ YCK+ A +F ++ N D V++N++++G+ +++A+ L ++ G+
Sbjct: 182 VDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSD 241
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ LS + + FG Q+H ++K V+VGNAL+ YS+ ++ E ++F E
Sbjct: 242 FTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXE 301
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAA--SACGHEK 173
MP D +S+N +++ Y +G + ++ RK R D F A S
Sbjct: 302 MPELDGISYNVVITSYAWNGQFKES-----FDLFRKLQFTRFDRRQFPFATLLSIATSSL 356
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
NL +G+QIH +I +G V N L+ Y+KC +A K+F + ++ + WT MIS
Sbjct: 357 NLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMIS 416
Query: 234 M-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
E+ +++F +MR GV + TF ++ A + + GR +H L I++ F+S
Sbjct: 417 AYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMS 476
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ L+ YA+ M D+ K F E+ R +SWNALIS YAQNG + +F +I
Sbjct: 477 NVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMI 536
Query: 349 KES-KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ KP++ +F SVL+A G E+ +L H + I +V + ++++D+ +
Sbjct: 537 QSGYKPDSVSFLSVLSACSHCGFVEE-ALWHFNSM-TQIYEVTPKREHY--TSMVDVLCR 592
Query: 405 RGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G E++++ E E SE W++++++ H ++E
Sbjct: 593 NGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHE 629
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 102/230 (44%), Gaps = 38/230 (16%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVC--NCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ +I +KT F P+ C N + + + + +VFD++ + IS N +I
Sbjct: 24 LNSNHLIDAHIVKTGF--NPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMI 81
Query: 329 SGYAQNGLSLAAVQAFFGVIKES--------------------------------KPNAY 356
SG+ + G A + F G+++ + +P+
Sbjct: 82 SGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYV 141
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
T ++L+ G E ++ + H+H+IK+G + + +V ++L+D Y K ++ + ++F
Sbjct: 142 TLVTLLSGFGELETKNVI--VQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
K + ++++ + G E + F E+ N G++P TF ++L+
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLS 249
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 207/652 (31%), Positives = 352/652 (53%), Gaps = 21/652 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLI----GVVF 55
+ MY K G A+ +F + D VSWNT++SGF +S D + S + ++ G
Sbjct: 81 LGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYH 140
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ V ALS C + GL++H +VK G+DS+ ++ +ALI MY + G + A VF
Sbjct: 141 NRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVF 200
Query: 116 D-----EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
+ E+ ++ WN ++ GY + + A+ +EM+ G+ D + C
Sbjct: 201 ERIRDNELVGRNMAVWNVMILGYVSNECLSL-ALELFVEMLELGISPDSSTVVVVLVLCS 259
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW-T 229
+L +GKQIHG+ + +G V VG LM Y KC + ++F+R + N++ W +
Sbjct: 260 QLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGS 319
Query: 230 TMISMNRE----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
M++ + +A+ F E LD P+ V + + A S +L G IHG IK
Sbjct: 320 VMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMG 379
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F S+ V L+ Y + M+ +++VF LS R+++SWNALISG+AQN + A++AF
Sbjct: 380 FDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFR 439
Query: 346 GV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ K+ KPN T +L+ + L + H ++++ +++ +V ++L+ Y K
Sbjct: 440 DMQSKQIKPNTVTMACILSVCTHLSVMIL--CKEVHCYLLRHWFETNALVNNSLISAYAK 497
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G I S+ VF + ++E W +I+ HG + + F++M+ ++PD TF S+
Sbjct: 498 CGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSL 557
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L+ C +G + G F+SM++DY++EP + Y+CMVD+LGR G L +A +L+ +P P
Sbjct: 558 LSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSP 617
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ SLL +C+ HGN ++ E +A+ + +++ + G VL++NLY + G+ V +R
Sbjct: 618 DDRIWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRVRT 677
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K G++K+ G SW +V + +H F +GD +H RS +IY E L EMK
Sbjct: 678 DIKQMGLKKQPGCSWIEVD--NSIHIFVAGDYSHDRSGDIYATIESLSLEMK 727
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 254/552 (46%), Gaps = 59/552 (10%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G Q+H ++KFG +++V N+L+ MY + G A +F+ M +DSVSWN ++SG+ Q
Sbjct: 58 GKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQ 117
Query: 136 DGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
GDY V++++ M+++ G + V+ +A S+C K L G +IHG +K G +
Sbjct: 118 SGDY-VKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSD 176
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHD-----RNVISWTTMISMNRED-----AVSLF 243
+ + L+ Y KC +A VF R+ D RN+ W MI + A+ LF
Sbjct: 177 EFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELF 236
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
EM G+ P+ T + ++ S + G+ IHGL + + V L+ MY +
Sbjct: 237 VEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKC 296
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVL 362
+ S ++F ++ W +++ AQNG A++ F + + P+ +L
Sbjct: 297 GDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVI---LL 353
Query: 363 NAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
A+ A +SLK G H IK+G DSD VG AL+D YGK G + +Q+VF +
Sbjct: 354 AALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTR 413
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC------------- 468
+W A+IS A++ + + F++M++K ++P+++T +L+VC
Sbjct: 414 DLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVH 473
Query: 469 ----------------------GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
+ G IH R +F+ + E + + M GR
Sbjct: 474 CYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKL--PVRNEVTWNSILLGFGMHGR 531
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK---MEPAGSGSY 563
+ E + + P SLL +C G V+ G + +++M+ +EP Y
Sbjct: 532 TDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVE-QY 590
Query: 564 VLMSNLYAEKGD 575
M +L G+
Sbjct: 591 TCMVDLLGRAGN 602
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 191/406 (47%), Gaps = 22/406 (5%)
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA-ASACGHEKNLELGKQIHGVS 185
N ++ T+DG + +AI ++ + G ++ F A G ++ GKQIHG
Sbjct: 7 NRMIKECTEDG-FFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHL 65
Query: 186 IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAV 240
+K G+ + V N L+ Y KC G+A +F RM +R+ +SW TMI S + ++
Sbjct: 66 LKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSL 125
Query: 241 SLFKEM--RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
+F+ M G N V + + + + + G IHG +K S+ + + LI
Sbjct: 126 VMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIE 185
Query: 299 MYARFESMQDSEKVFD-----ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
MY + ++++E VF+ EL R + WN +I GY N A++ F +++
Sbjct: 186 MYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGIS 245
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P++ T VL D+++ G++ H I+ +GLD D VG+AL++MY K G S
Sbjct: 246 PDSSTVVVVLVLCSQLLDLAV--GKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSL 303
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
++F +Q + W +++ A++G + F E PD + L+ L C
Sbjct: 304 QIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLS 363
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEEL 516
+ +G + +K + D + +VD G+ G +E A+++
Sbjct: 364 LKPRGMAIHGFAIK---MGFDSDVFVGGALVDFYGKCGDMEYAQQV 406
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 208/649 (32%), Positives = 353/649 (54%), Gaps = 19/649 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKSD---DALS-FALRMNLIGVVF 55
+N Y +D A C+F+N+ NP +I WN +++G+ K+ +AL F ++ +
Sbjct: 45 INQYLSCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKP 104
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D+ TY + C ++ G +H+ ++K GL ++ VG++L+ MY + +A +F
Sbjct: 105 DSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLF 164
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+EMP KD WN ++S Y Q G++ +A+ M R G + V+ T+A S+C +L
Sbjct: 165 NEMPEKDVACWNTVISCYYQSGNFK-DALEYFGLMRRFGFEPNSVTITTAISSCARLLDL 223
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G +IH I G+ + + L+ Y KC A ++F +M + V++W +MIS
Sbjct: 224 NRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGY 283
Query: 236 --REDAVS---LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ D +S LFK M +GV P T LI S + EG+ +HG I+ +
Sbjct: 284 GLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDV 343
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + L+ +Y + ++ +EK+F + +++SWN +ISGY G A+ F +++
Sbjct: 344 FVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEAL-GLFSEMRK 402
Query: 351 S--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S + +A TF SVL A ++ +L+ G+ H+ II+ LD++ +V ALLDMY K G++
Sbjct: 403 SYVESDAITFTSVLTA--CSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAV 460
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E+ VF ++ +WT++I+A HG + F EM V+PD + FL++L+ C
Sbjct: 461 DEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSAC 520
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG-GPGLS 527
G G++ +G + F+ M+ Y I P +HYSC++D+LGR GRL EA E++ Q P +
Sbjct: 521 GHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVE 580
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+L +L ACR+H N+++G IA L+ +P S +Y+L+SN+YA W+ V ++R MK
Sbjct: 581 LLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMK 640
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G++K G SW ++ + F DN+H E +++ L M+
Sbjct: 641 ELGLKKNPGCSWIEIN--QKILPFFVEDNSHLHLELVFKCLSYLSDHME 687
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 137/268 (51%), Gaps = 8/268 (2%)
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL- 316
+ L+ A +K+G++IH + ++ +C LI Y ++ VFD +
Sbjct: 6 LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNME 65
Query: 317 -SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISL 373
C EI WN L++GY +N + + A++ F ++ KP++YT+ SV A G L
Sbjct: 66 NPC-EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVL 124
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
G+ H+ +IK GL D +VGS+L+ MYGK + ++ +FNE EK W +IS
Sbjct: 125 --GKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCY 182
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
+ G+++ + F M G P+S+T + ++ C R +++G + + ++ + S
Sbjct: 183 YQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDS 242
Query: 494 PDHYSCMVDMLGRVGRLEEAEELVGQIP 521
S +VDM G+ G LE A E+ Q+P
Sbjct: 243 FIS-SALVDMYGKCGHLEMAIEIFEQMP 269
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 206/647 (31%), Positives = 359/647 (55%), Gaps = 18/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+ MY + D A +F+ + + VSW +V++ ++ DAL M G D
Sbjct: 93 ITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQ 152
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+A+ C + G Q+H+ +K S++ V NAL+TMYS+ G + + +F+
Sbjct: 153 FALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFER 212
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNLE 176
+ +KD +SW +I++G+ Q G + +EA+ EM+ +G + F SA ACG + E
Sbjct: 213 IKDKDLISWGSIIAGFAQQG-FEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWE 271
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+QIHG+SIK + VG L Y++C+ A F R+ +++SW ++++
Sbjct: 272 YGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYS 331
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+A+ LF EMR G+ P+ +T GL+ A + + GR+IH +K + S
Sbjct: 332 VEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVS 391
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VCN L++MYAR + + VF E+ +++++WN++++ AQ+ V F ++ +S
Sbjct: 392 VCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHP-EEVLKLFSLLNKS 450
Query: 352 KP--NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+P + + +VL+A +AE + ++ H++ K GL D ++ + L+D Y K GS+
Sbjct: 451 EPSLDRISLNNVLSA--SAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLD 508
Query: 410 ESQRVFNET-QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ R+F + F+W+++I A+ G + + F M + G+RP+ +TF+ VLT C
Sbjct: 509 DAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTAC 568
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
R G +++G + + M +Y I P+ +H SC+VD+L R G+L EA + Q+P P + +
Sbjct: 569 SRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIM 628
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
++LL A ++H ++EMG+R A+ ++ ++P+ S +YVL+ N+YA G+W A L+K M++
Sbjct: 629 WKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRT 688
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
GV+K G SW + L F D +HP SEEIY M E +G EM
Sbjct: 689 SGVKKSPGKSWVKLK--GELKVFIVEDRSHPESEEIYAMLELIGMEM 733
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 223/435 (51%), Gaps = 21/435 (4%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+GN LITMY R AR+VFDEMP ++ VSW ++++ + Q+G G +A+ M+R
Sbjct: 88 LGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAG-DALGLFSSMLRS 146
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G D + SA AC ++ G+Q+H ++K G+ + V N L++ YSK + D
Sbjct: 147 GTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDG 206
Query: 214 NKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGV-CPNDVTFIGLIHAISI 267
+F R+ D+++ISW ++I+ + +A+ +F+EM ++G PN+ F A
Sbjct: 207 FMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGA 266
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
+ G IHGL IK + V L MYAR +++ + F + +++SWN++
Sbjct: 267 VGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSI 326
Query: 328 ISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
++ Y+ GL L+ F +++S +P+ T +L A + +L HG+ HS+++K
Sbjct: 327 VNAYSVEGL-LSEALVLFSEMRDSGLRPDGITVRGLLCACVGRD--ALYHGRLIHSYLVK 383
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
+GLD D V ++LL MY + + + VF+E +++ W +I++A A+H E V+
Sbjct: 384 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKL 443
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL----FDSMLKDYHIEPSPDHYSCMV 501
F + D I+ +VL+ G + + F + L D + + ++
Sbjct: 444 FSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLS-----NTLI 498
Query: 502 DMLGRVGRLEEAEEL 516
D + G L++A L
Sbjct: 499 DTYAKCGSLDDAMRL 513
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 211/441 (47%), Gaps = 37/441 (8%)
Query: 151 MRKGLRLD-HVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
+ +G R+ H+ +S++S Q+ G ++ +GN L++ Y +C
Sbjct: 60 LPQGRRVHRHLVASSSSSP---------DAQLAGNTV---------LGNHLITMYGRCAA 101
Query: 210 TGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHA 264
A +VF M RN +SW ++I+ + + DA+ LF M G + + A
Sbjct: 102 PDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRA 161
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+ V GR +H +K+ S+ V N L+TMY++ + D +F+ + +++ISW
Sbjct: 162 CTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISW 221
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
++I+G+AQ G + A+Q F +I E PN + FGS A GA S ++G++ H
Sbjct: 222 GSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVG--SWEYGEQIHGL 279
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
IK LD D VG +L DMY + ++ ++ F + +W +I++A + G
Sbjct: 280 SIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEA 339
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVC-GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+ F EM + G+RPD IT +L C GR+ + H GR L S L ++ + ++
Sbjct: 340 LVLFSEMRDSGLRPDGITVRGLLCACVGRDALYH-GR-LIHSYLVKLGLDGDVSVCNSLL 397
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG 561
M R L A ++ +I + S+L AC H + E ++ L K EP S
Sbjct: 398 SMYARCSDLSSAMDVFHEIK-DQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP--SL 454
Query: 562 SYVLMSNLY---AEKGDWEMV 579
+ ++N+ AE G +EMV
Sbjct: 455 DRISLNNVLSASAELGYFEMV 475
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 201/603 (33%), Positives = 325/603 (53%), Gaps = 23/603 (3%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
G + Y L C++ G LH +VK G ++++V +L+ +Y R +A
Sbjct: 71 GQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDA 130
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
RR+FD MP+K+ V+W A+++G+T + + + A+ +EM+ G H + SAC
Sbjct: 131 RRLFDGMPDKNVVTWTALITGHTLNSEPAL-ALEVFVEMLELGRYPSHYTLGGMLSACSA 189
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+ ++LG+Q+HG SIK G T S+GN L Y K + F+ D+NVI+WTTM
Sbjct: 190 ARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTM 249
Query: 232 ISMNRED------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
IS ED +SLF +M GV PN+ T ++ + G+ + C K
Sbjct: 250 ISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVG 309
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ-----------N 334
+ V N + +Y R ++ ++F+E+ II+WNA+ISGYAQ
Sbjct: 310 CEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHAR 369
Query: 335 GLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
A++ F +++ E KP+ +TF S+L+ A ++L+ G++ H++ IK G SD +
Sbjct: 370 SRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAM--MALEQGEQIHANTIKTGCLSDVV 427
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
V SAL++MY K GSI + + F E ++ WT++IS ++HG + + F++M G
Sbjct: 428 VNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSG 487
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
RP+ ITF+S+L+ C G++ + FD M +YHIEP DHY CMVDM R+GRL++A
Sbjct: 488 ARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDA 547
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEK 573
+ + P ++ SL+ CR HGN+E+ AD L++++P +YVL+ N+Y
Sbjct: 548 FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYIST 607
Query: 574 GDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGS 633
G W VA +RK K + V SW + D ++ F + D THP++ E+Y++ E L
Sbjct: 608 GRWRDVARVRKLAKHEDVGVLRDRSWIAIR--DKVYFFRADDMTHPQATELYQLLENLLE 665
Query: 634 EMK 636
+ K
Sbjct: 666 KAK 668
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 228/463 (49%), Gaps = 26/463 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+N+Y + A +F+ + + ++V+W +++G + + AL + M +G
Sbjct: 118 VNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSH 177
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T LS C G Q+H +K+G D+ +GN+L +Y + G L R F
Sbjct: 178 YTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKG 237
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
P+K+ ++W ++S +D +Y + ++M+ G+ + + TS S CG ++ L
Sbjct: 238 TPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSL 297
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+ K+G ++ V N M Y + T +A ++F M ++I+W MIS
Sbjct: 298 GKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQ 357
Query: 234 ---MNRED---------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
++D A+ LF+++ + P+ TF ++ S +++G IH
Sbjct: 358 IMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANT 417
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IKT LS+ V + L+ MY + S++ + K F E+ R ++W ++ISGY+Q+G S A+
Sbjct: 418 IKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAI 477
Query: 342 QAFFG-VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SAL 398
Q F V+ ++PN TF S+L+A A + + +R + +++ +P+V +
Sbjct: 478 QLFEDMVLSGARPNEITFVSLLSACSYAGLV--EEAER-YFDMMRNEYHIEPLVDHYGCM 534
Query: 399 LDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+DM+ + G + ++ T E +E W+++++ HG+ E
Sbjct: 535 VDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNME 577
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 219/660 (33%), Positives = 356/660 (53%), Gaps = 37/660 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI--------G 52
+N+Y K F KA +F+++NN D+VSWN +++ F + M+L
Sbjct: 52 INLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKT 111
Query: 53 VVFDAVTYS---TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
+V +A T + TA S D G Q H+L VK +V+ ++L+ MY + G +
Sbjct: 112 IVPNAHTLTGVFTAASTLSDSRA---GRQAHALAVKTACSHDVFAASSLLNMYCKTGLVF 168
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR---KGLRLDHVSFTSAA 166
EAR +FDEMP +++VSW ++SGY + EA L ++MR KG + FTS
Sbjct: 169 EARDLFDEMPERNAVSWATMISGYASQ-ELADEA-FELFKLMRHEEKGKNENEFVFTSVL 226
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
SA + G+Q+H +++K G VSV N L++ Y KC DA K F ++N I
Sbjct: 227 SALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSI 286
Query: 227 SWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+W+ M++ + + A+ LF +M G P++ T +G+I+A S + EGR +HG
Sbjct: 287 TWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYS 346
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG-----L 336
+K + + V + L+ MYA+ S+ D+ K F+ + +++ W ++I+GY QNG L
Sbjct: 347 LKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGAL 406
Query: 337 SLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
+L GVI PN T SVL A + +L G++ H+ IIK + +GS
Sbjct: 407 NLYGKMQLGGVI----PNDLTMASVLKA--CSNLAALDQGKQMHAGIIKYNFSLEIPIGS 460
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
AL MY K GS+ + R+F + +W A+IS L+++G + F++M +G +P
Sbjct: 461 ALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKP 520
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
D++TF+++L+ C G++ +G F M +++I P+ +HY+CMVD+L R G+L EA+E
Sbjct: 521 DNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEF 580
Query: 517 VGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDW 576
+ GL + + LL A + H + ++G + LM++ S +YVL+S++Y G W
Sbjct: 581 IESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKW 640
Query: 577 EMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
E V +R MK++GV KE G SW ++ + H F GDN HP+ +EI + L MK
Sbjct: 641 EDVERVRGMMKARGVTKEPGCSWIELKSLT--HVFVVGDNMHPQIDEIRLGLKLLTKLMK 698
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 245/472 (51%), Gaps = 15/472 (3%)
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
AL C H+ G LH+ I+ G S + N+LI +Y++ +A VFD + NKD
Sbjct: 16 ALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKD 75
Query: 123 SVSWNAILSGYTQDGDYG----VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
VSWN +++ ++Q + V + + M K + + + T +A + G
Sbjct: 76 VVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAG 135
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNR 236
+Q H +++K V + L++ Y K + +A +F M +RN +SW TMIS ++
Sbjct: 136 RQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQ 195
Query: 237 E---DAVSLFKEMRLD--GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E +A LFK MR + G N+ F ++ A++ LV GR +H L +K + S
Sbjct: 196 ELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVS 255
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L+TMY + S++D+ K F+ + I+W+A+++G+AQ G S A++ F+ + +
Sbjct: 256 VANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSG 315
Query: 352 K-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ P+ +T V+NA A ++ G++ H + +K+G + V SAL+DMY K GSI +
Sbjct: 316 ELPSEFTLVGVINACSDA--CAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVD 373
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+++ F Q+ WT+II+ ++GDYE +N + +M+ GV P+ +T SVL C
Sbjct: 374 ARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSN 433
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+ +G+ + ++K Y+ S + M + G L++ + ++P
Sbjct: 434 LAALDQGKQMHAGIIK-YNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPA 484
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 198/421 (47%), Gaps = 35/421 (8%)
Query: 159 HVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR 218
H+ A C K L G+ +H + G + + N L++ Y+KC AN VF
Sbjct: 10 HLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFD 69
Query: 219 RMHDRNVISWTTMI---SMNREDAVS-----LFKEMRL--DGVCPNDVTFIGLIHAISIG 268
+++++V+SW +I S + A S LF+++ + + PN T G+ A S
Sbjct: 70 SINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTL 129
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ + GR H L +KT + + L+ MY + + ++ +FDE+ R +SW +I
Sbjct: 130 SDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMI 189
Query: 329 SGYAQNGLSLAAVQAFFGVIKESK---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
SGYA L+ A + F + E K N + F SVL+A+ + + G++ HS +K
Sbjct: 190 SGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCY--MLVNTGRQVHSLAMK 247
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
GL V +AL+ MY K GS+ ++ + F + K+ W+A+++ A+ GD + +
Sbjct: 248 NGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKL 307
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-DYHIEPSPDHYSCMVDML 504
F +M G P T + V+ C I +GR + LK Y ++ S +VDM
Sbjct: 308 FYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYV--LSALVDMY 365
Query: 505 GRVGRLEEAE---ELVGQIPGGPGLSVLQSLL----------GACRIHGNVEMGERIADA 551
+ G + +A E + Q P + + S++ GA ++G +++G I +
Sbjct: 366 AKCGSIVDARKGFECIQQ----PDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPND 421
Query: 552 L 552
L
Sbjct: 422 L 422
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 215/658 (32%), Positives = 364/658 (55%), Gaps = 32/658 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLN---NPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVV 54
+++Y KSG KA +F + D+VSW+ +++ + + DA+ + +G+V
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVE-AR 112
+ Y+ + C + + G ++K G +S+V VG +LI M+ + E A
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+VFD+M + V+W +++ Q G + EAI ++M+ G D + +S SAC
Sbjct: 224 KVFDKMSELNVVTWTLMITRCMQMG-FPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG---DANKVFRRMHDRNVISWT 229
+NL LGKQ+H +I+ G V L+ Y+KC G D KVF RM D +V+SWT
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 230 TMISMNRE------DAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNL--VKEGRMIHGL 280
+I+ + +A++LF EM G V PN TF A GNL + G+ + G
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC--GNLSDPRVGKQVLGQ 398
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
K S SV N +I+M+ + + M+D+++ F+ LS + ++S+N + G +N L+
Sbjct: 399 AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN-LNFEQ 457
Query: 341 VQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
I E + +A+TF S+L+ G A S++ G++ HS ++K+GL + V +AL
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLS--GVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+ MY K GSI + RVFN + ++ +WT++I+ A+HG V+ F +M +GV+P+
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
+T++++L+ C G++ +G F+SM +D+ I+P +HY+CMVD+L R G L +A E +
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEM 578
+P + V ++ LGACR+H N E+G+ A +++++P +Y+ +SN+YA G WE
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 579 VAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+R+ MK + + KE G SW +VG D +H F GD HP + +IY + L +E+K
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVG--DKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 240/479 (50%), Gaps = 26/479 (5%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D+VT+S+ L C+ F G +H+ +++F ++ + + N+LI++YS+ G +A VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 116 DEMP---NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+ M +D VSW+A+++ Y +G ++AI +E + GL + +T+ AC +
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNG-RELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 173 KNLELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVT-GDANKVFRRMHDRNVISWTT 230
+ +G+ G +K G + + V VG L+ + K E + +A KVF +M + NV++WT
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 231 MISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MI+ + +A+ F +M L G + T + A + + G+ +H I++
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 286 FLSEPSVCNCLITMYARFE---SMQDSEKVFDELSCREIISWNALISGYAQN-GLSLAAV 341
+ + C+ L+ MYA+ S+ D KVFD + ++SW ALI+GY +N L+ A+
Sbjct: 300 LVDDVE-CS-LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 342 QAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F +I + +PN +TF S A G D + G++ K GL S+ V ++++
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV--GKQVLGQAFKRGLASNSSVANSVI 415
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
M+ K + ++QR F EK+ ++ + R+ ++E E+ + + +
Sbjct: 416 SMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAF 475
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEEL 516
TF S+L+ G I KG + ++K + S + C ++ M + G ++ A +
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVK---LGLSCNQPVCNALISMYSKCGSIDTASRV 531
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 208/412 (50%), Gaps = 22/412 (5%)
Query: 143 AILALIEMMRKGLR-LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLM 201
A+ AL M R G+R +D V+F+S +C ++ LGK +H I+ + N L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 202 STYSKCEVTGDANKVF---RRMHDRNVISWTTMISM----NRE-DAVSLFKEMRLDGVCP 253
S YSK + A VF RR R+V+SW+ M++ RE DA+ +F E G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKT-NFLSEPSVCNCLITMYARFE-SMQDSEK 311
ND + +I A S + V GR+ G +KT +F S+ V LI M+ + E S +++ K
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTFGSVLNAVGAAED 370
VFD++S +++W +I+ Q G A++ F V+ + + +T SV +A E+
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK---RGSIFESQRVFNETQEKSEFAWT 427
+SL G++ HS I+ GL D V +L+DMY K GS+ + ++VF+ ++ S +WT
Sbjct: 285 LSL--GKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 428 AIISALARHGDYES-VMNQFKEMENKG-VRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
A+I+ ++ + + +N F EM +G V P+ TF S CG G+ +
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
K + + + ++ M + R+E+A+ + +S L G CR
Sbjct: 401 K-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 124/318 (38%), Gaps = 66/318 (20%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
++MY K G D A +FN + N +++SW ++++GF K A+ N + GV +
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
VTY LS C L EG+ +S+ + ++ ++ + R G L +A
Sbjct: 576 VTYVAILSACSHVGLVSEGWR---HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 114 VFDEMP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLD------HVSFTSAA 166
+ MP D + W L + + + A RK L LD ++ ++
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLAA-----RKILELDPNEPAAYIQLSNIY 687
Query: 167 SACGH------------EKNL---------ELGKQIHGVSIKMGYGTHVSVGNV------ 199
+ G E+NL E+G +IH + G H + +
Sbjct: 688 ACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYV--GDTAHPNAHQIYDELDR 745
Query: 200 LMSTYSKCEVTGDANKVFRRM---------------HDRNVISWTTMISMNREDAVSLFK 244
L++ +C D + V ++ H + +IS ++ V +FK
Sbjct: 746 LITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFK 805
Query: 245 EMRLDGVCPNDVTFIGLI 262
+R+ G C N + +I +
Sbjct: 806 NLRVCGDCHNAMKYISTV 823
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 219/650 (33%), Positives = 356/650 (54%), Gaps = 22/650 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD----ALSFALRMNLIGVVFDA-- 57
+ + G D A IF + ++VS N ++ G K A F +L+G+ D+
Sbjct: 327 FARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYV 386
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFD 116
V S F + EG G ++H+ +++ GL D++V +GN L+ MY++ G + +A VF+
Sbjct: 387 VLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE 446
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M KDSVSWN+++SG Q+ + +A + M R G + + S S+C +
Sbjct: 447 LMVEKDSVSWNSLISGLDQN-ECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIM 505
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
LG+QIH +K+G T VSV N L++ Y++ + KVF M + + +SW ++I
Sbjct: 506 LGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALS 565
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ AV F +M G + VTFI ++ A+S +L + IH L +K +
Sbjct: 566 DSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDT 625
Query: 291 SVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQ-AFFGVI 348
++ N L++ Y + M + EK+F +S R+ +SWN++ISGY N L A+ +F +
Sbjct: 626 AIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQ 685
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
K + +++TF ++L+A + +L+ G H+ I+ L+SD +VGSAL+DMY K G I
Sbjct: 686 KGQRLDSFTFATILSACASVA--TLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRI 743
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ R F ++ ++W ++IS ARHG E + F M G PD +TF+ VL+ C
Sbjct: 744 DYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSAC 803
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G + +G F SM + Y + P +H+SCMVD+LGR G+L+E + + +P P + +
Sbjct: 804 SHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLI 863
Query: 529 LQSLLGA-CRIHG-NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
+++LGA CR +G N E+G R A+ L+++EP + +YVL++N+YA WE VA R M
Sbjct: 864 WRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAM 923
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
K V+KE G SW + DG+H F +GD HP + IY L +M+
Sbjct: 924 KEAAVKKEAGCSWVTMK--DGVHVFVAGDKLHPEKDLIYDKLRELNRKMR 971
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 222/433 (51%), Gaps = 32/433 (7%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
+LH +K+G +++ N LI +Y R G L A+++FDEM N++ V+W ++SGYTQ+G
Sbjct: 92 ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNG 151
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE--KNLELGKQIHGVSIKMGYGTHVS 195
EA +M+R G +H +F SA AC +LG QIHG+ K YG+ V
Sbjct: 152 KPD-EACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVV 210
Query: 196 VGNVLMSTYSKC-EVTGDANKVFRRMHDRNVISWTTMISM--NREDAVS---LFKEMRLD 249
V NVL+S Y C + DA VF + RN ISW ++IS+ R DAVS LF M+ +
Sbjct: 211 VCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKE 270
Query: 250 GV----CPNDVTFIGLIHAISIGNLVKEGRMIHGLCI---------KTNFLSEPSVCNCL 296
G+ PN+ TF LI + GLC+ K+ FL + V + L
Sbjct: 271 GLGFSFKPNEYTFGSLITTAC-------SSVDFGLCVLEQMLARVEKSGFLQDLYVSSAL 323
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAY 356
++ +ARF D++ +F+++ R ++S N L+ G + AA + F + N+
Sbjct: 324 VSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD 383
Query: 357 TFGSVLNAVG--AAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQR 413
++ +L+A + + + G+ H+H+I+ GL+ + + +G+ L++MY K G+I ++
Sbjct: 384 SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS 443
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF EK +W ++IS L ++ E F M G P + T +S L+ C G
Sbjct: 444 VFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGW 503
Query: 474 IHKGRHLFDSMLK 486
I G + LK
Sbjct: 504 IMLGEQIHCDGLK 516
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 154/547 (28%), Positives = 285/547 (52%), Gaps = 35/547 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+N+Y + G A +F+ ++N ++V+W ++SG+ K D+A + M G + +
Sbjct: 113 INIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNH 172
Query: 58 VTYSTALSFCLDH--EGFLFGLQLHSLIVKFGLDSEVYVGNALITMY-SRWGRLVEARRV 114
+ +AL C + G G+Q+H LI K S+V V N LI+MY S +AR V
Sbjct: 173 YAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSV 232
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL----RLDHVSFTS-AASAC 169
FD + ++S+SWN+I+S Y++ GD V A M ++GL + + +F S +AC
Sbjct: 233 FDGIGIRNSISWNSIISVYSRRGD-AVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTAC 291
Query: 170 GH-EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
+ L + +Q+ K G+ + V + L+S +++ +T DA +F +M RNV+S
Sbjct: 292 SSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSM 351
Query: 229 TTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM----IHG 279
++ E A +F EM+ D V N +++ L+ A S ++++EGR +H
Sbjct: 352 NGLMVGLVKQKQGEAAAKVFHEMK-DLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHA 410
Query: 280 LCIKTNFL-SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
I+T ++ ++ N L+ MYA+ ++ D+ VF+ + ++ +SWN+LISG QN S
Sbjct: 411 HVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSE 470
Query: 339 AAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A ++F + + S P+ +T S L++ + I L G++ H +K+GLD+D V +A
Sbjct: 471 DAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIML--GEQIHCDGLKLGLDTDVSVSNA 528
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ----FKEMENKG 453
LL +Y + G E +VF+ E + +W ++I AL+ D E+ ++Q F +M G
Sbjct: 529 LLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALS---DSEASVSQAVKYFLQMMRGG 585
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+TF+++L+ + H+ H +++ Y + + ++ G+ G + E
Sbjct: 586 WGLSRVTFINILSAVSSLSL-HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNEC 644
Query: 514 EELVGQI 520
E++ ++
Sbjct: 645 EKIFARM 651
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 221/449 (49%), Gaps = 18/449 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMY KSG A +F + D VSWN+++SG ++ S+DA RM G +
Sbjct: 429 VNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSN 488
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + LS C + G Q+H +K GLD++V V NAL+ +Y+ G E +VF
Sbjct: 489 FTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSL 548
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D VSWN+++ + +A+ ++MMR G L V+F + SA E+
Sbjct: 549 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEV 608
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS--M 234
QIH + +K ++GN L+S Y KC + K+F RM + R+ +SW +MIS +
Sbjct: 609 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 668
Query: 235 NRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E A+ L M G + TF ++ A + ++ G +H I+ S+
Sbjct: 669 HNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVV 728
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + L+ MY++ + + + F+ + R + SWN++ISGYA++G A++ F ++ +
Sbjct: 729 VGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDG 788
Query: 352 KPNAY-TFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+P + TF VL+A VG E+ +H + S + ++ + S ++D+ G+ G
Sbjct: 789 QPPDHVTFVGVLSACSHVGFVEE-GFEHF-KSMSEVYRLSPRVEHF--SCMVDLLGRAGK 844
Query: 408 IFESQRVFNETQEKSE-FAWTAIISALAR 435
+ E N K W ++ A R
Sbjct: 845 LDEVGDFINSMPMKPNVLIWRTVLGACCR 873
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 162/317 (51%), Gaps = 16/317 (5%)
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
E +++H SIK G+ ++ + N L++ Y + G A K+F M +RN+++W +IS
Sbjct: 88 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 147
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI--SIGNLVKEGRMIHGLCIKTNFLS 288
++A + F++M G PN F + A S + K G IHGL KT + S
Sbjct: 148 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 207
Query: 289 EPSVCNCLITMYAR-FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ VCN LI+MY +S D+ VFD + R ISWN++IS Y++ G +++A F +
Sbjct: 208 DVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM 267
Query: 348 IKES-----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
KE KPN YTFGS++ ++ D L ++ + + K G D V SAL+ +
Sbjct: 268 QKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGF 327
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN-KGVRPDSITF 461
+ G +++ +F + ++ + ++ L + E+ F EM++ G+ DS +
Sbjct: 328 ARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDS--Y 385
Query: 462 LSVLTVCGRNGMIHKGR 478
+ +L+ ++ +GR
Sbjct: 386 VVLLSAFSEFSVLEEGR 402
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 16/327 (4%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
TF LI+ +E R +H IK F+ + N LI +Y R + ++K+FDE+
Sbjct: 73 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKH 375
S R +++W LISGY QNG A F +++ PN Y FGS L A + K
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 192
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGK-RGSIFESQRVFNETQEKSEFAWTAIISALA 434
G + H I K SD +V + L+ MYG S +++ VF+ ++ +W +IIS +
Sbjct: 193 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 252
Query: 435 RHGDYESVMNQFKEMENKGV----RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
R GD S + F M+ +G+ +P+ TF S++T + + G + + ML +
Sbjct: 253 RRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSS--VDFGLCVLEQMLA--RV 308
Query: 491 EPS---PDHY--SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
E S D Y S +V R G ++A+ + Q+ G + + L+ E
Sbjct: 309 EKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQM-GVRNVVSMNGLMVGLVKQKQGEAA 367
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAE 572
++ + + S SYV++ + ++E
Sbjct: 368 AKVFHEMKDLVGINSDSYVVLLSAFSE 394
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 215/658 (32%), Positives = 364/658 (55%), Gaps = 32/658 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLN---NPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVV 54
+++Y KSG KA +F + D+VSW+ +++ + + DA+ + +G+V
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVE-AR 112
+ Y+ + C + + G ++K G +S+V VG +LI M+ + E A
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+VFD+M + V+W +++ Q G + EAI ++M+ G D + +S SAC
Sbjct: 224 KVFDKMSELNVVTWTLMITRCMQMG-FPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG---DANKVFRRMHDRNVISWT 229
+NL LGKQ+H +I+ G V L+ Y+KC G D KVF RM D +V+SWT
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 230 TMISMNRE------DAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNL--VKEGRMIHGL 280
+I+ + +A++LF EM G V PN TF A GNL + G+ + G
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC--GNLSDPRVGKQVLGQ 398
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
K S SV N +I+M+ + + M+D+++ F+ LS + ++S+N + G +N L+
Sbjct: 399 AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN-LNFEQ 457
Query: 341 VQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
I E + +A+TF S+L+ G A S++ G++ HS ++K+GL + V +AL
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLS--GVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+ MY K GSI + RVFN + ++ +WT++I+ A+HG V+ F +M +GV+P+
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
+T++++L+ C G++ +G F+SM +D+ I+P +HY+CMVD+L R G L +A E +
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEM 578
+P + V ++ LGACR+H N E+G+ A +++++P +Y+ +SN+YA G WE
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 579 VAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+R+ MK + + KE G SW +VG D +H F GD HP + +IY + L +E+K
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVG--DKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 226/447 (50%), Gaps = 21/447 (4%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D+VT+S+ L C+ F G +H+ +++F ++ + + N+LI++YS+ G +A VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 116 DEMP---NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+ M +D VSW+A+++ Y +G ++AI +E + GL + +T+ AC +
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNG-RELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 173 KNLELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVT-GDANKVFRRMHDRNVISWTT 230
+ +G+ G +K G + + V VG L+ + K E + +A KVF +M + NV++WT
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 231 MISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MI+ + +A+ F +M L G + T + A + + G+ +H I++
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 286 FLSEPSVCNCLITMYARFE---SMQDSEKVFDELSCREIISWNALISGYAQN-GLSLAAV 341
+ + V L+ MYA+ S+ D KVFD + ++SW ALI+GY +N L+ A+
Sbjct: 300 LVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 342 QAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F +I + +PN +TF S A G D + G++ K GL S+ V ++++
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV--GKQVLGQAFKRGLASNSSVANSVI 415
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
M+ K + ++QR F EK+ ++ + R+ ++E E+ + + +
Sbjct: 416 SMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAF 475
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLK 486
TF S+L+ G I KG + ++K
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVK 502
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 208/412 (50%), Gaps = 22/412 (5%)
Query: 143 AILALIEMMRKGLR-LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLM 201
A+ AL M R G+R +D V+F+S +C ++ LGK +H I+ + N L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 202 STYSKCEVTGDANKVF---RRMHDRNVISWTTMISM----NRE-DAVSLFKEMRLDGVCP 253
S YSK + A VF RR R+V+SW+ M++ RE DA+ +F E G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKT-NFLSEPSVCNCLITMYARFE-SMQDSEK 311
ND + +I A S + V GR+ G +KT +F S+ V LI M+ + E S +++ K
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTFGSVLNAVGAAED 370
VFD++S +++W +I+ Q G A++ F V+ + + +T SV +A E+
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK---RGSIFESQRVFNETQEKSEFAWT 427
+SL G++ HS I+ GL D V +L+DMY K GS+ + ++VF+ ++ S +WT
Sbjct: 285 LSL--GKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 428 AIISALARHGDYES-VMNQFKEMENKG-VRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
A+I+ ++ + + +N F EM +G V P+ TF S CG G+ +
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
K + + + ++ M + R+E+A+ + +S L G CR
Sbjct: 401 K-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 210/641 (32%), Positives = 349/641 (54%), Gaps = 28/641 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLN-NPDIVSWNTVLSGFEKSDDALSFALRMN------LIGV 53
++MY K G F A +F + D++SWNT+L S+D SF +N L G+
Sbjct: 377 ISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGA---SEDRKSFGKVVNTFHHMLLAGI 433
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD-SEVYVGNALITMYSRWGRLVEAR 112
+ V++ L+ C + E FG ++HSLI+ D E V L++MY + G + EA
Sbjct: 434 DPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAE 493
Query: 113 RVFDEMP--NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
VF EMP ++ V+WN +L Y Q+ D EA AL+EM++ G+ D +SFTS S+C
Sbjct: 494 LVFKEMPLPSRSLVTWNVMLGAYAQN-DRSKEAFGALMEMLQGGVLPDALSFTSVLSSCY 552
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ ++ + ++ GY + + L+S + +C A VF M +V+SWT
Sbjct: 553 CSQEAQV---LRMCILESGYRS-ACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTA 608
Query: 231 MISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
M+S E + LF+ M+L+GV P+ T + + G++IH +
Sbjct: 609 MVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIG 668
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
++ +V N L+ MY+ +++ F+ + R+++SWN + + YAQ GL+ AV F
Sbjct: 669 LEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFR 728
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ E KP+ TF + LN G + +S G+ H + GLDSD V + L+ +Y K
Sbjct: 729 HMQLEGVKPDKLTFSTTLNVSGGSALVS--DGKLFHGLAAESGLDSDVSVATGLVKLYAK 786
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + E+ +F + + AII ALA+HG E + F +M+ +GVRPD T +S+
Sbjct: 787 CGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSI 846
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
++ CG GM+ +G F +M + + I P+ +HY+C VD+LGR G+LE AE+++ ++P
Sbjct: 847 ISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFED 906
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
V SLLG C++ G+ E+GER A +++++P S ++V++SN+Y G W+ + RK
Sbjct: 907 NTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRK 966
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+ + V+ G SW ++G +H F +GD +HP+++EIY
Sbjct: 967 KLLDQNVKNAPGMSWLEIG--KQVHEFVAGDRSHPQTDEIY 1005
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/573 (27%), Positives = 277/573 (48%), Gaps = 38/573 (6%)
Query: 41 ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALIT 100
+LS A+R++ D Y+ L C+D G + H LI GL+ +++GN LI
Sbjct: 12 SLSGAVRVDRAA---DLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLIN 68
Query: 101 MYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
MY R G L EA +F +M ++ VSW A++S Q G + L ++ +
Sbjct: 69 MYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSY 128
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGY----GTHVSVGNVLMSTYSKCEVTGDANKV 216
+ + +AC + ++L +G+ IH + ++G T VGN +++ Y+KC DA V
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAV 188
Query: 217 FRRMHDRNVISWTTMISMNRE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
F + +++V+SWT M + DA+ +F+EM L + PN +TFI + A +
Sbjct: 189 FLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS--- 245
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE---IISWNAL 327
+++G +H L + +P N LI MY + + + VF ++ R+ ++SWNA+
Sbjct: 246 LRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAM 305
Query: 328 ISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
IS + G A+ F + E +PN+ T ++LNA+ AA + ++ H I +
Sbjct: 306 ISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNAL-AASGVDFGAARKFHGRIWES 364
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQ 445
G D +VG+A++ MY K G + VF + K + +W ++ A + V+N
Sbjct: 365 GYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNT 424
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML---KDYHIEPSPDHYSCMVD 502
F M G+ P+ ++F+++L C + + GR + +L +DY +E S + +V
Sbjct: 425 FHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY-VESSV--ATMLVS 481
Query: 503 MLGRVGRLEEAEELVGQIP-GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG-- 559
M G+ G + EAE + ++P L +LGA + + + ALM+M G
Sbjct: 482 MYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGA---YAQNDRSKEAFGALMEMLQGGVL 538
Query: 560 ----SGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
S + VL S +++ + IL G +S
Sbjct: 539 PDALSFTSVLSSCYCSQEAQVLRMCILESGYRS 571
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 159/551 (28%), Positives = 277/551 (50%), Gaps = 36/551 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD-ALSFALRMNLI---GVVFD 56
+NMY + G ++A IF+ + ++VSW ++S +S A +FAL ++ +
Sbjct: 67 INMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPN 126
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSE----VYVGNALITMYSRWGRLVEAR 112
+ T L+ C + G +H++I + GL+ E VGNA+I MY++ G +A
Sbjct: 127 SYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAI 186
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
VF +P KD VSW A+ Y Q+ + +A+ EM+ + L + ++F +A AC
Sbjct: 187 AVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC--- 243
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR---NVISWT 229
+L G +H + + G G GN L++ Y KC A VF+ M R +++SW
Sbjct: 244 TSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWN 303
Query: 230 TMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL-VKEGRMIHGLCIK 283
MIS + E DA+++F+ +RL+G+ PN VT I +++A++ + R HG +
Sbjct: 304 AMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWE 363
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQ 342
+ +L + V N +I+MYA+ + VF + + ++ISWN ++ G +++ S V
Sbjct: 364 SGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTML-GASEDRKSFGKVV 422
Query: 343 AFFG--VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD-SDPIVGSALL 399
F ++ PN +F ++LNA +E +L G++ HS I+ D + V + L+
Sbjct: 423 NTFHHMLLAGIDPNKVSFIAILNACSNSE--ALDFGRKIHSLILTRRRDYVESSVATMLV 480
Query: 400 DMYGKRGSIFESQRVFNET--QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
MYGK GSI E++ VF E +S W ++ A A++ + EM GV PD
Sbjct: 481 SMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPD 540
Query: 458 SITFLSVLTVCGRNGMIHKGRH-LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+++F SVL+ C + R + +S + +E + ++ M GR LE+A +
Sbjct: 541 ALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETA------LISMHGRCRELEQARSV 594
Query: 517 VGQIPGGPGLS 527
++ G +S
Sbjct: 595 FDEMDHGDVVS 605
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 218/662 (32%), Positives = 355/662 (53%), Gaps = 32/662 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSD---DALSFALRMNLIGVV 54
+N+Y K G F +F+ ++ + VSWN+++S FEK + +A L N+
Sbjct: 53 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 112
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
F V+ TA S EG + G Q+H+ ++ G + ++ N L+ MY + G+L ++ +
Sbjct: 113 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVL 171
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
+D V+WN +LS Q+ +EA+ L EM+ +G+ D + +S AC H +
Sbjct: 172 LGSFGGRDLVTWNTVLSSLCQNEQL-LEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 230
Query: 175 LELGKQIHGVSIKMGYGTHVS-VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI- 232
L GK++H ++K G S VG+ L+ Y C+ +VF M DR + W MI
Sbjct: 231 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 290
Query: 233 --SMNRED--AVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S N D A+ LF M G+ N T G++ A IHG +K
Sbjct: 291 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 350
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG------LSLAAV 341
+ V N L+ MY+R + + ++F ++ R++++WN +I+GY + L L +
Sbjct: 351 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 410
Query: 342 QAFFGVIKES------KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
Q + + KPN+ T ++L + A +L G+ H++ IK L +D VG
Sbjct: 411 QNLERKVSKGASRVSLKPNSITLMTILPSCAALS--ALAKGKEIHAYAIKNNLATDVAVG 468
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
SAL+DMY K G + S++VF++ +K+ W II A HG+ + ++ + M +GV+
Sbjct: 469 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 528
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P+ +TF+SV C +GM+ +G +F M DY +EPS DHY+C+VD+LGR GR++EA +
Sbjct: 529 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ 588
Query: 516 LVGQIPGGPGLS-VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKG 574
L+ +P + SLLGA RIH N+E+GE A L+++EP + YVL++N+Y+ G
Sbjct: 589 LMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAG 648
Query: 575 DWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSE 634
W+ +R+ MK +GVRKE G SW + G D +H F +GD++HP+SE++ E L
Sbjct: 649 LWDKATEVRRNMKEQGVRKEPGCSWIEHG--DEVHKFVAGDSSHPQSEKLSGYLETLWER 706
Query: 635 MK 636
M+
Sbjct: 707 MR 708
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 140/536 (26%), Positives = 258/536 (48%), Gaps = 34/536 (6%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNALITMYSRW 105
M ++G+ D + L D + G Q+H+ + KFG +DS V V N L+ +Y +
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDS-VTVANTLVNLYRKC 59
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYT--QDGDYGVEAILALIEMMRKGLRLDHVSFT 163
G +VFD + ++ VSWN+++S + + +EA +++ + VS
Sbjct: 60 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 119
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
+A S + L +GKQ+H ++ G + N L++ Y K + + R
Sbjct: 120 TACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGR 178
Query: 224 NVISWTTMIS---MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
++++W T++S N + +A+ +EM L+GV P++ T ++ A S +++ G+ +H
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 238
Query: 279 GLCIKTNFLSEPS-VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS 337
+K L E S V + L+ MY + + +VFD + R+I WNA+I+GY+QN
Sbjct: 239 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 298
Query: 338 LAAVQAFFGVIKESK---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
A+ F G ++ES N+ T V+ A + S K + H ++K GLD D V
Sbjct: 299 KEALLLFIG-MEESAGLLANSTTMAGVVPACVRSGAFSRK--EAIHGFVVKRGLDRDRFV 355
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA---RHGDYESVMNQFKEMEN 451
+ L+DMY + G I + R+F + +++ W +I+ H D ++++ + +E
Sbjct: 356 QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 415
Query: 452 K--------GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
K ++P+SIT +++L C + KG+ + +K+ ++ S +VDM
Sbjct: 416 KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDM 474
Query: 504 LGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+ G L+ + ++ QIP + ++ A +HGN G+ D L M G
Sbjct: 475 YAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---GQEAIDLLRMMMVQG 526
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 203/637 (31%), Positives = 353/637 (55%), Gaps = 16/637 (2%)
Query: 10 FDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSF 66
+ A +F+ P + N +L G+ +S + L M + D+ + + AL
Sbjct: 80 LEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKA 139
Query: 67 CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSW 126
C + G+++ S V+ G++ +VG+++I+ ++G++ EA+RVFD MPNKD V W
Sbjct: 140 CASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCW 199
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSI 186
N+I+ GY Q G + V A EM G++ ++ TS ACG NL+LGK +HG +
Sbjct: 200 NSIIGGYVQAGCFDV-AFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVL 258
Query: 187 KMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAV-----S 241
+G G + V + YSK A VF +M RN++SW MIS + +
Sbjct: 259 GLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFD 318
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
LF + + T + L+ S + G+++HG I++ F S + ++ +Y+
Sbjct: 319 LFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYS 377
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
+ S++ + VF+ + R +I+W A++ G AQNG + A++ F + +E N+ TF S
Sbjct: 378 KCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVS 437
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE-TQ 419
++++ A SLK G+ H H+ ++G D + +AL+DMY K G I ++R+F+ +
Sbjct: 438 LVHS--CAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSI 495
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
K W ++I+ HG + + +M +G++P+ TFLS+L+ C + ++ +G
Sbjct: 496 SKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGIS 555
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIH 539
LF+SM +D++I P HY+C+VD+L R GR EEA+ L+ ++P PG +VL++LL CR H
Sbjct: 556 LFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTH 615
Query: 540 GNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSW 599
N+ +G + +D L+ ++ G Y+++SN+YAE W+ V +R M+++G++K G+S
Sbjct: 616 KNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSL 675
Query: 600 ADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ G + +H F +GDN+HP EEIY E L S ++
Sbjct: 676 VETG--NWVHTFFAGDNSHPNWEEIYHFLESLRSAVE 710
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 240/470 (51%), Gaps = 15/470 (3%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H+ I+ L ++ +V L+ YS L AR VFD+ + NA+L GY Q G Y
Sbjct: 52 HAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRY 111
Query: 140 GVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
L L +MR + L +D S T A AC + E+G +I +++ G + VG+
Sbjct: 112 --RETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGS 169
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCP 253
++S K G+A +VF M +++V+ W ++I + A LF EM G+ P
Sbjct: 170 SMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKP 229
Query: 254 NDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
+ +T LI A IGNL K G+ +HG + ++ V + MY++ ++ + V
Sbjct: 230 SPITMTSLIQACGGIGNL-KLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWV 288
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAV-GAAEDI 371
F ++ R ++SWNA+ISG +NGL + F +++ S + ++++ + G ++
Sbjct: 289 FYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSS--GGFDLTTIVSLLQGCSQTA 346
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SL G+ H I+ +S+ I+ +A++D+Y K GS+ ++ VFN ++++ WTA++
Sbjct: 347 SLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLV 405
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
LA++G E + F +M+ +G+ +S+TF+S++ C G + +GR + + +
Sbjct: 406 GLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFR-LGFA 464
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+ + +VDM + G++ AE + + + S++ +HG+
Sbjct: 465 FDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGH 514
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 162/326 (49%), Gaps = 12/326 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD-DALSFALRMNLIGVV--FDA 57
++MY K G + A +F + ++VSWN ++SG ++ SF L L+ FD
Sbjct: 273 VDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDL 332
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C G LH ++ +S + + A++ +YS+ G L +A VF+
Sbjct: 333 TTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNR 391
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +++ ++W A+L G Q+G + +A+ +M +G+ + V+F S +C H +L+
Sbjct: 392 MKDRNVITWTAMLVGLAQNG-HAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKR 450
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMIS--- 233
G+ IHG ++G+ + L+ Y+KC A ++F ++V+ W +MI+
Sbjct: 451 GRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYG 510
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEP 290
+ AV ++ +M +G+ PN TF+ L+ A S LV++G + + + N
Sbjct: 511 MHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIE 570
Query: 291 SVCNCLITMYARFESMQDSEKVFDEL 316
CL+ + +R ++++ + +++
Sbjct: 571 KHYACLVDLLSRAGRFEEAQALIEKM 596
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 214/647 (33%), Positives = 351/647 (54%), Gaps = 19/647 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRM--NLIGVVFDAV 58
+ K+G A +F+ + + +V+W ++ + ++ D+A +M + + D V
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVY--VGNALITMYSRWGRLVEARRVFD 116
T++T L C D Q+H+ VK G D+ + V N L+ Y RL A +F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E+P KDSV++N +++GY +DG Y E+I ++M + G + +F+ A +
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLY-TESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFA 267
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
LG+Q+H +S+ G+ SVGN ++ YSK + + +F M + + +S+ +IS
Sbjct: 268 LGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E ++ F+EM+ G + F ++ + + ++ GR +H + S
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L+ MYA+ E +++E +F L R +SW ALISGY Q GL A ++ F + +
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + TF +VL A +A SL G++ H+ II+ G + GS L+DMY K GSI +
Sbjct: 448 LRADQSTFATVLKA--SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ +VF E +++ +W A+ISA A +GD E+ + F +M G++PDS++ L VLT C
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G + +G F +M Y I P HY+CM+D+LGR GR EAE+L+ ++P P +
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625
Query: 531 SLLGACRIHGNVEMGERIADALMKMEP-AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
S+L ACRIH N + ER A+ L ME + +YV MSN+YA G+WE V ++K M+ +
Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G++K +SW +V +H FSS D THP +EI R L +E++
Sbjct: 686 GIKKVPAYSWVEVN--HKIHVFSSNDQTHPNGDEIVRKINELTAEIE 730
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 169/654 (25%), Positives = 296/654 (45%), Gaps = 67/654 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ YC+ + D A +F + D V++NT+++G+EK +++ L+M G
Sbjct: 191 LKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSD 250
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+S L + F G QLH+L V G + VGN ++ YS+ R++E R +FDE
Sbjct: 251 FTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDE 310
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP D VS+N ++S Y+Q Y EA L EM G + F + S + +L+
Sbjct: 311 MPELDFVSYNVVISSYSQADQY--EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQ 368
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
+G+Q+H ++ + + VGN L+ Y+KCE+ +A +F+ + R +SWT +IS
Sbjct: 369 MGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYV 428
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + LF +MR + + TF ++ A + + G+ +H I++ L
Sbjct: 429 QKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVF 488
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ L+ MYA+ S++D+ +VF+E+ R +SWNALIS +A NG AA+ AF +I+
Sbjct: 489 SGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG 548
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS----DPIVG--------SAL 398
+P++ + VL A H ++ G + PI G + +
Sbjct: 549 LQPDSVSILGVLTACS-------------HCGFVEQGTEYFQAMSPIYGITPKKKHYACM 595
Query: 399 LDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
LD+ G+ G E++++ +E E E W+++++A H + +++ + D
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRD 655
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLK----------------DYHIEPSPDHYSCMV 501
+ ++S+ + G K R + +M + H+ S D
Sbjct: 656 AAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNG 715
Query: 502 DMLGR-VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGS 560
D + R + L E G P SV+Q + +I ER+A A +
Sbjct: 716 DEIVRKINELTAEIEREGYKPDTS--SVVQDVDEQMKIESLKYHSERLAVAFALISTPEG 773
Query: 561 GSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSG 614
V+M NL A + + ++ SK V++E+ V D H FS G
Sbjct: 774 CPIVVMKNLRACRDCHAAIKLI-----SKIVKREIT-----VRDTSRFHHFSEG 817
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 135/531 (25%), Positives = 257/531 (48%), Gaps = 55/531 (10%)
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
FL ++ + I+K G D++ N ++ R G++ AR+V+DEMP+K++VS N ++SG
Sbjct: 29 FLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISG 88
Query: 133 YTQDGDYGV------------------------------EAILALIEMMRKG--LRLDHV 160
+ + GD EA +M R DHV
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTH--VSVGNVLMSTYSKCEVTGDANKVFR 218
+FT+ C Q+H ++K+G+ T+ ++V NVL+ +Y + A +F
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 219 RMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE 273
+ +++ +++ T+I+ +D ++ LF +MR G P+D TF G++ A+ +
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
G+ +H L + T F + SV N ++ Y++ + + ++ +FDE+ + +S+N +IS Y+Q
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 334 NGLSLAAVQAF-----FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
A++ F G + + P F ++L+ AA SL+ G++ H +
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFP----FATMLSI--AANLSSLQMGRQLHCQALLATA 382
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
DS VG++L+DMY K E++ +F +++ +WTA+IS + G + + + F +
Sbjct: 383 DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTK 442
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG 508
M +R D TF +VL + G+ L +++ ++E + S +VDM + G
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCG 501
Query: 509 RLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+++A ++ ++P +S +L+ A H + GE A KM +G
Sbjct: 502 SIKDAVQVFEEMPDRNAVS-WNALISA---HADNGDGEAAIGAFAKMIESG 548
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 218/662 (32%), Positives = 355/662 (53%), Gaps = 32/662 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSD---DALSFALRMNLIGVV 54
+N+Y K G F +F+ ++ + VSWN+++S FEK + +A L N+
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
F V+ TA S EG + G Q+H+ ++ G + ++ N L+ MY + G+L ++ +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVL 258
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
+D V+WN +LS Q+ +EA+ L EM+ +G+ D + +S AC H +
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQL-LEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 175 LELGKQIHGVSIKMGYGTHVS-VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI- 232
L GK++H ++K G S VG+ L+ Y C+ +VF M DR + W MI
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 233 --SMNRED--AVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S N D A+ LF M G+ N T G++ A IHG +K
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG------LSLAAV 341
+ V N L+ MY+R + + ++F ++ R++++WN +I+GY + L L +
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 342 QAFFGVIKES------KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
Q + + KPN+ T ++L + A +L G+ H++ IK L +D VG
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALS--ALAKGKEIHAYAIKNNLATDVAVG 555
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
SAL+DMY K G + S++VF++ +K+ W II A HG+ + ++ + M +GV+
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P+ +TF+SV C +GM+ +G +F M DY +EPS DHY+C+VD+LGR GR++EA +
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ 675
Query: 516 LVGQIPGGPGLS-VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKG 574
L+ +P + SLLGA RIH N+E+GE A L+++EP + YVL++N+Y+ G
Sbjct: 676 LMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAG 735
Query: 575 DWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSE 634
W+ +R+ MK +GVRKE G SW + G D +H F +GD++HP+SE++ E L
Sbjct: 736 LWDKATEVRRNMKEQGVRKEPGCSWIEHG--DEVHKFVAGDSSHPQSEKLSGYLETLWER 793
Query: 635 MK 636
M+
Sbjct: 794 MR 795
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 140/536 (26%), Positives = 258/536 (48%), Gaps = 34/536 (6%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNALITMYSRW 105
M ++G+ D + L D + G Q+H+ + KFG +DS V V N L+ +Y +
Sbjct: 88 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDS-VTVANTLVNLYRKC 146
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYT--QDGDYGVEAILALIEMMRKGLRLDHVSFT 163
G +VFD + ++ VSWN+++S + + +EA +++ + VS
Sbjct: 147 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 206
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
+A S + L +GKQ+H ++ G + N L++ Y K + + R
Sbjct: 207 TACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGR 265
Query: 224 NVISWTTMIS---MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
++++W T++S N + +A+ +EM L+GV P++ T ++ A S +++ G+ +H
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 279 GLCIKTNFLSEPS-VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS 337
+K L E S V + L+ MY + + +VFD + R+I WNA+I+GY+QN
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 385
Query: 338 LAAVQAFFGVIKESK---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
A+ F G ++ES N+ T V+ A + S K + H ++K GLD D V
Sbjct: 386 KEALLLFIG-MEESAGLLANSTTMAGVVPACVRSGAFSRK--EAIHGFVVKRGLDRDRFV 442
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA---RHGDYESVMNQFKEMEN 451
+ L+DMY + G I + R+F + +++ W +I+ H D ++++ + +E
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 502
Query: 452 K--------GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
K ++P+SIT +++L C + KG+ + +K+ ++ S +VDM
Sbjct: 503 KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDM 561
Query: 504 LGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+ G L+ + ++ QIP + ++ A +HGN G+ D L M G
Sbjct: 562 YAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---GQEAIDLLRMMMVQG 613
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 203/396 (51%), Gaps = 26/396 (6%)
Query: 142 EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT-HVSVGNVL 200
EA+L ++M+ G++ D+ +F + A +++ELGKQIH K GYG V+V N L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPND 255
++ Y KC G KVF R+ +RN +SW ++IS E A+ F+ M + V P+
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 256 VTFIGLIHAIS---IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
T + ++ A S + + G+ +H ++ L+ + N L+ MY + + S+ +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVL 258
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
R++++WN ++S QN L A++ ++ E +P+ +T SVL A E
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE-- 316
Query: 372 SLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
L+ G+ H++ +K G LD + VGSAL+DMY + +RVF+ ++ W A+I
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 431 SALARH-GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK--- 486
+ +++ D E+++ E+ G+ +S T V+ C R+G + + ++K
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 487 --DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
D ++ + ++DM R+G+++ A + G++
Sbjct: 437 DRDRFVQ------NTLMDMYSRLGKIDIAMRIFGKM 466
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 123/241 (51%), Gaps = 12/241 (4%)
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
W L+ ++ L AV + +I KP+ Y F ++L AV +D+ L G++ H+H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL--GKQIHAH 122
Query: 383 IIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
+ K G D + V + L+++Y K G +VF+ E+++ +W ++IS+L +E
Sbjct: 123 VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 182
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGM---IHKGRHLFDSMLKDYHIEPSPDHYS 498
+ F+ M ++ V P S T +SV+T C M + G+ + L+ E + +
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG--ELNSFIIN 240
Query: 499 CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA-CRIHGNVEMGERIADALMK-ME 556
+V M G++G+L ++ L+G GG L ++L + C+ +E E + + +++ +E
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSF-GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 557 P 557
P
Sbjct: 300 P 300
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 199/635 (31%), Positives = 338/635 (53%), Gaps = 17/635 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N+Y K A + + D+ WN LS +A+ M + +
Sbjct: 31 VNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQ 90
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+++ +S +G +H+ + K+G +S++ + NA +TMY + + + F
Sbjct: 91 FIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKA 150
Query: 118 MPNKDSVSWNAILSGY--TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M ++ S N +LSG+ T+ D G LI+++ +G + +F S C + +L
Sbjct: 151 MMIENLASRNNLLSGFCDTETCDQGPRI---LIQLLVEGFEPNMYTFISILKTCASKGDL 207
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
GK IHG IK G + N L++ Y+KC A KVF + +R+V+SWT +I+
Sbjct: 208 NEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGF 267
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +F +M +G PN TFI ++ + S + V G+ +H +K +
Sbjct: 268 VAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDF 327
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+ MYA+ ++D+E +F+ L R++ +W +++GYAQ+G AV+ F + +E
Sbjct: 328 VGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG 387
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN +T S L+ G + +L G++ HS IK G D V SAL+DMY K G + +
Sbjct: 388 VKPNEFTLASSLS--GCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVED 445
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF+ + +W II ++HG + F+ M ++G PD +TF+ VL+ C
Sbjct: 446 AEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSH 505
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+I +G+ F+S+ K Y I P+ +HY+CMVD+LGR G+ E E + ++ + + +
Sbjct: 506 MGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWE 565
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
++LGAC++HGN+E GER A L ++EP +Y+L+SN++A KG W+ V +R M ++G
Sbjct: 566 TVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRG 625
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
V+KE G SW +V +H F S D +HP+ EI+
Sbjct: 626 VKKEPGCSWVEVN--GQVHVFLSHDGSHPKIREIH 658
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 229/441 (51%), Gaps = 17/441 (3%)
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVE 142
++K G+ + ++ ++L+ +Y + L AR+V +EMP +D WN LS + + Y ++
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLS--SANSPYPLQ 72
Query: 143 AILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLM 201
+ L +MR +RL+ F S SA + G+ IH K G+ + + + N +
Sbjct: 73 EAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFV 132
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDV 256
+ Y K + + + F+ M N+ S ++S + + ++ ++G PN
Sbjct: 133 TMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMY 192
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
TFI ++ + + EG+ IHG IK+ + + N L+ +YA+ S + KVF E+
Sbjct: 193 TFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEI 252
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKH 375
R+++SW ALI+G+ G + ++ F ++ E PN YTF S+L + + D+ L
Sbjct: 253 PERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDL-- 309
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G++ H+ I+K LD + VG+AL+DMY K + +++ +FN ++ FAWT I++ A+
Sbjct: 310 GKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQ 369
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
G E + F +M+ +GV+P+ T S L+ C R + GR L +K S D
Sbjct: 370 DGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIK---AGQSGD 426
Query: 496 HY--SCMVDMLGRVGRLEEAE 514
+ S +VDM + G +E+AE
Sbjct: 427 MFVASALVDMYAKCGCVEDAE 447
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 218/662 (32%), Positives = 355/662 (53%), Gaps = 32/662 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSD---DALSFALRMNLIGVV 54
+N+Y K G F +F+ ++ + VSWN+++S FEK + +A L N+
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
F V+ TA S EG + G Q+H+ ++ G + ++ N L+ MY + G+L ++ +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVL 258
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
+D V+WN +LS Q+ +EA+ L EM+ +G+ D + +S AC H +
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQL-LEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 175 LELGKQIHGVSIKMGYGTHVS-VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI- 232
L GK++H ++K G S VG+ L+ Y C+ +VF M DR + W MI
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 233 --SMNRED--AVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S N D A+ LF M G+ N T G++ A IHG +K
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG------LSLAAV 341
+ V N L+ MY+R + + ++F ++ R++++WN +I+GY + L L +
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 342 QAFFGVIKES------KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
Q + + KPN+ T ++L + A +L G+ H++ IK L +D VG
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALS--ALAKGKEIHAYAIKNNLATDVAVG 555
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
SAL+DMY K G + S++VF++ +K+ W II A HG+ + ++ + M +GV+
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P+ +TF+SV C +GM+ +G +F M DY +EPS DHY+C+VD+LGR GR++EA +
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ 675
Query: 516 LVGQIPGGPGLS-VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKG 574
L+ +P + SLLGA RIH N+E+GE A L+++EP + YVL++N+Y+ G
Sbjct: 676 LMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAG 735
Query: 575 DWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSE 634
W+ +R+ MK +GVRKE G SW + G D +H F +GD++HP+SE++ E L
Sbjct: 736 LWDKATEVRRNMKEQGVRKEPGCSWIEHG--DEVHKFVAGDSSHPQSEKLSGYLETLWER 793
Query: 635 MK 636
M+
Sbjct: 794 MR 795
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 140/536 (26%), Positives = 258/536 (48%), Gaps = 34/536 (6%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNALITMYSRW 105
M ++G+ D + L D + G Q+H+ + KFG +DS V V N L+ +Y +
Sbjct: 88 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDS-VTVANTLVNLYRKC 146
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYT--QDGDYGVEAILALIEMMRKGLRLDHVSFT 163
G +VFD + ++ VSWN+++S + + +EA +++ + VS
Sbjct: 147 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 206
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
+A S + L +GKQ+H ++ G + N L++ Y K + + R
Sbjct: 207 TACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGR 265
Query: 224 NVISWTTMIS---MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
++++W T++S N + +A+ +EM L+GV P++ T ++ A S +++ G+ +H
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 279 GLCIKTNFLSEPS-VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS 337
+K L E S V + L+ MY + + +VFD + R+I WNA+I+GY+QN
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 385
Query: 338 LAAVQAFFGVIKESK---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
A+ F G ++ES N+ T V+ A + S K + H ++K GLD D V
Sbjct: 386 KEALLLFIG-MEESAGLLANSTTMAGVVPACVRSGAFSRK--EAIHGFVVKRGLDRDRFV 442
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA---RHGDYESVMNQFKEMEN 451
+ L+DMY + G I + R+F + +++ W +I+ H D ++++ + +E
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 502
Query: 452 K--------GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
K ++P+SIT +++L C + KG+ + +K+ ++ S +VDM
Sbjct: 503 KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDM 561
Query: 504 LGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+ G L+ + ++ QIP + ++ A +HGN G+ D L M G
Sbjct: 562 YAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---GQEAIDLLRMMMVQG 613
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 203/396 (51%), Gaps = 26/396 (6%)
Query: 142 EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT-HVSVGNVL 200
EA+L ++M+ G++ D+ +F + A +++ELGKQIH K GYG V+V N L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPND 255
++ Y KC G KVF R+ +RN +SW ++IS E A+ F+ M + V P+
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 256 VTFIGLIHAIS---IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
T + ++ A S + + G+ +H ++ L+ + N L+ MY + + S+ +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVL 258
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
R++++WN ++S QN L A++ ++ E +P+ +T SVL A E
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE-- 316
Query: 372 SLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
L+ G+ H++ +K G LD + VGSAL+DMY + +RVF+ ++ W A+I
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 431 SALARH-GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK--- 486
+ +++ D E+++ E+ G+ +S T V+ C R+G + + ++K
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 487 --DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
D ++ + ++DM R+G+++ A + G++
Sbjct: 437 DRDRFVQ------NTLMDMYSRLGKIDIAMRIFGKM 466
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 123/241 (51%), Gaps = 12/241 (4%)
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
W L+ ++ L AV + +I KP+ Y F ++L AV +D+ L G++ H+H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL--GKQIHAH 122
Query: 383 IIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
+ K G D + V + L+++Y K G +VF+ E+++ +W ++IS+L +E
Sbjct: 123 VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 182
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGM---IHKGRHLFDSMLKDYHIEPSPDHYS 498
+ F+ M ++ V P S T +SV+T C M + G+ + L+ E + +
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG--ELNSFIIN 240
Query: 499 CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA-CRIHGNVEMGERIADALMK-ME 556
+V M G++G+L ++ L+G GG L ++L + C+ +E E + + +++ +E
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSF-GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 557 P 557
P
Sbjct: 300 P 300
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 204/593 (34%), Positives = 327/593 (55%), Gaps = 49/593 (8%)
Query: 88 LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
L+ ++ N++I +++ G L +A +F++MP D SWN+++SG+ Q G + EA++
Sbjct: 81 LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFD-EALVYF 139
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
+M G ++ SF SA SAC ++L+LG QIH + + Y + V +G+ L+ YSKC
Sbjct: 140 AQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKC 199
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLI 262
A VF M R+ +SW ++I+ + +A+ +F EM GV P++VT ++
Sbjct: 200 GRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVV 259
Query: 263 HAISIGNLVKEGRMIHGLCIKTN-FLSEPSVCNCLITMYARFESMQDSEKVFDELSCR-- 319
A + + +KEG+ IH +K + F ++ + N L+ MYA+ + ++ +FD + R
Sbjct: 260 SACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSV 319
Query: 320 -----------------------------EIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
++I+WNALI+G QNG + A+ F + +E
Sbjct: 320 VSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRE 379
Query: 351 SK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL------DSDPIVGSALLDMYG 403
S P YTFG++LNA D+ L G++ HSH++K G DSD VG++L+DMY
Sbjct: 380 SVWPTHYTFGNLLNACANLADLQL--GRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYM 437
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K GS+ RVF EK +W A+I A++G + F +M G PD +T +
Sbjct: 438 KCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIG 497
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL C G++ +GR+ F SM + + P DHY+CMVD+LGR G LEEA+ L+ ++
Sbjct: 498 VLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQ 557
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
P V SLL AC++H N+++GE + L++++P SG YVL+SN+YAE DW+ V +R
Sbjct: 558 PDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVR 617
Query: 584 KGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
K M+ +GV K+ G SW ++ L+ F D H R +EIY + + +MK
Sbjct: 618 KLMRQRGVVKQPGCSWIEIQ--GELNVFMVKDKRHARKKEIYMVLRTILQQMK 668
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 149/530 (28%), Positives = 249/530 (46%), Gaps = 83/530 (15%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
+ KSG D A+ IF + D SWN+++SGFE+ D+AL + +M+ G + + ++
Sbjct: 95 FTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSF 154
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ALS C + G Q+HSL+ + S+VY+G+AL+ MYS+ GR+ A+ VFDEM
Sbjct: 155 GSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTV 214
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+ VSWN++++ Y Q+G EA+ +EM++ G+ D V+ S SAC ++ G+Q
Sbjct: 215 RSRVSWNSLITCYEQNGPVD-EALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQ 273
Query: 181 IHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS------ 233
IH +K + + +GN L+ Y+KC +A +F M R+V+S T+M+S
Sbjct: 274 IHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKAS 333
Query: 234 ------------------------------MNREDAVSLFKEMRLDGVCPNDVTFIGLIH 263
E+A+ LF+ ++ + V P TF L++
Sbjct: 334 KVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLN 393
Query: 264 AISIGNLVKEGRMIHGLCIKTNFL------SEPSVCNCLITMYARFESMQDSEKVFDELS 317
A + ++ GR H +K F S+ V N LI MY + S+++ +VF +
Sbjct: 394 ACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHML 453
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHG 376
++ +SWNA+I GYAQNG A++ F +++ + P+ T VL A A
Sbjct: 454 EKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHA-------- 505
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
LLD G + + +T ++ L R
Sbjct: 506 --------------------GLLD----EGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRA 541
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
G E N +EM ++PD+I + S+L C + I G ++ +L+
Sbjct: 542 GYLEEAKNLIEEM---SMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLE 588
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 190/378 (50%), Gaps = 49/378 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G+ + A +F+ + VSWN++++ +E++ D+AL + M GV D
Sbjct: 193 VDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDE 252
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT ++ +S C G Q+H+ +VK +++ +GNAL+ MY++ R+ EAR +FD
Sbjct: 253 VTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFD 312
Query: 117 EMP-------------------------------NKDSVSWNAILSGYTQDGDYGVEAIL 145
MP KD ++WNA+++G TQ+G+ EA++
Sbjct: 313 MMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGE-NEEALI 371
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY------GTHVSVGNV 199
+ R+ + H +F + +AC + +L+LG+Q H +K G+ + V VGN
Sbjct: 372 LFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNS 431
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPN 254
L+ Y KC + +VF+ M +++ +SW MI ++ A+ +F +M G P+
Sbjct: 432 LIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPD 491
Query: 255 DVTFIGLIHAISIGNLVKEGR-MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
VT IG++ A S L+ EGR + + + C++ + R +++++ +
Sbjct: 492 HVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLI 551
Query: 314 DELSCR-EIISWNALISG 330
+E+S + + I W +L++
Sbjct: 552 EEMSMQPDAIVWGSLLAA 569
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 184/401 (45%), Gaps = 71/401 (17%)
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
L LD F+ + C ++ ++H IK + + + N L+ Y KC A
Sbjct: 15 LFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVAR 74
Query: 215 KVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEM-------------------RLD- 249
K+F RM +RN+ SW ++I S +DAV +F++M R D
Sbjct: 75 KLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDE 134
Query: 250 -----------GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
G N+ +F + A + +K G IH L ++N+LS+ + + L+
Sbjct: 135 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 194
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYT 357
MY++ ++ ++ VFDE++ R +SWN+LI+ Y QNG A++ F +IK +P+ T
Sbjct: 195 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 254
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFN 416
SV++A ++K GQ+ H+ ++K +D I+G+ALLDMY K I E++ +F+
Sbjct: 255 LASVVSACATIS--AIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFD 312
Query: 417 ---------ETQEKSEFA----------------------WTAIISALARHGDYESVMNQ 445
ET S +A W A+I+ ++G+ E +
Sbjct: 313 MMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALIL 372
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
F+ ++ + V P TF ++L C + GR +LK
Sbjct: 373 FRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLK 413
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 34/312 (10%)
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
L K ++ D + + F L++ + ++ +H IK+ F SE + N LI +Y
Sbjct: 6 LVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYG 65
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF----------------- 344
+ + + K+FD + R I SWN++I + ++G AV F
Sbjct: 66 KCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISG 125
Query: 345 ---FGVIKES------------KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
G E+ N Y+FGS L+A +D LK G + HS + +
Sbjct: 126 FEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQD--LKLGSQIHSLVYRSNYL 183
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
SD +GSAL+DMY K G + +Q VF+E +S +W ++I+ ++G + + F EM
Sbjct: 184 SDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEM 243
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
GV PD +T SV++ C I +G+ + ++K + ++DM + R
Sbjct: 244 IKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNR 303
Query: 510 LEEAEELVGQIP 521
+ EA + +P
Sbjct: 304 INEARIIFDMMP 315
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + +F ++ D VSWN ++ G+ ++ + AL +M G D
Sbjct: 433 IDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDH 492
Query: 58 VTYSTALSFCLDHEGFL--FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT L C H G L S+ + GL ++ + R G L EA+ +
Sbjct: 493 VTMIGVLCAC-SHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLI 551
Query: 116 DEMP-NKDSVSWNAILSGYT-----QDGDYGVEAIL 145
+EM D++ W ++L+ Q G+Y V+ +L
Sbjct: 552 EEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLL 587
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 213/665 (32%), Positives = 365/665 (54%), Gaps = 27/665 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNL--NNPDIVSWNTVLSGFEKSDDALSFALRMN----LIGVV 54
+ +Y K A +F+ + D+VSW + S + + A + ALR+ G++
Sbjct: 91 LTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSR-NGAEAEALRLFGETLEEGLL 149
Query: 55 FDAVTYSTALSFCLDHEGF-LFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEAR 112
+A T A C E F L G + L+ K G ++V VG ALI M+++ G LV R
Sbjct: 150 PNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMR 209
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
RVFD + + V W +++ Y Q G Y EA+ ++M+ G + D + +S SAC
Sbjct: 210 RVFDGLFERTVVVWTLLITRYAQSG-YSDEAVELFLDMLENGFQPDQYTLSSMLSACTEL 268
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC---EVTGDANKVFRRMHDRNVISWT 229
+ LG+Q+H +++++G + V L+ Y+K + +A +VF RM NV++WT
Sbjct: 269 GSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWT 328
Query: 230 TMIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
++S + LF +M +G+ PN +T+ ++ A + GR IH C+K
Sbjct: 329 ALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVK 388
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+N V N L++MYA S++++ FD+L + ++S++ + G ++ Q
Sbjct: 389 SNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSN----TYQD 444
Query: 344 FFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ E + +TFGS+++A AA L GQR H+ +K G SD +G++L+ MY
Sbjct: 445 YQIERMELGISTFTFGSLISA--AASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYS 502
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
+ G + ++ +VF+E + + +WT++IS LA+HG + F +M GV+P+ +T+++
Sbjct: 503 RCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIA 562
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL+ C G++ +G+ F M K + + P +HY+CMVD+LGR G +E+A + + ++P
Sbjct: 563 VLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQ 622
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
V ++LLGAC+ H N+++GE A+ ++++EP YVL+SNLYAE G W+ VA +R
Sbjct: 623 VDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIR 682
Query: 584 KGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
M+ K + KE G SW V + +H F +GD +HP++EEIY E L E+K + +
Sbjct: 683 SLMRDKNLMKEKGLSWMHVDNT--IHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPD 740
Query: 644 RAIAL 648
++ L
Sbjct: 741 TSVVL 745
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 231/464 (49%), Gaps = 33/464 (7%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN--KDSVSWNAILSGY 133
LQ H L L+++ V N+L+T+YS+ + AR VFD MP +D VSW A+ S
Sbjct: 68 ALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCL 127
Query: 134 TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL-GKQIHGVSIKMGY-G 191
+++G EA+ E + +GL + + +A AC + L G + G+ K+G+ G
Sbjct: 128 SRNGAEA-EALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWG 186
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEM 246
T VSVG L+ ++K +VF + +R V+ WT +I S ++AV LF +M
Sbjct: 187 TDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDM 246
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF--- 303
+G P+ T ++ A + + G+ +H L ++ S+ V L+ MYA+
Sbjct: 247 LENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNG 306
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF-GVIKES-KPNAYTFGSV 361
+S+ ++ +VF+ + +++W AL+SGY Q G V F ++ E +PN T+ S+
Sbjct: 307 QSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSM 366
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L A D G++ H+H +K L +VG+AL+ MY + GSI E++ F++ EK
Sbjct: 367 LKACANLGD--QDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEK 424
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+ +++ + R Y+ Q + ME + + TF S+++ GM+ KG+ L
Sbjct: 425 NMVSFSGNLDGDGRSNTYQDY--QIERME---LGISTFTFGSLISAAASVGMLTKGQRLH 479
Query: 482 DSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
LK D I S +V M R G L +A ++ ++
Sbjct: 480 ALSLKAGFGSDRAIGNS------LVSMYSRCGYLVDACQVFDEM 517
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 211/646 (32%), Positives = 345/646 (53%), Gaps = 22/646 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MYCK + A +F+ + +I+S+N+++SG+ + + A+ L + D T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y+ AL FC + G LH L+V GL +V++ N LI MYS+ G+L +A +FD
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG---HEKNLE 176
+D VSWN+++SGY + G E + L +M R GL L + S AC +E +E
Sbjct: 211 ERDQVSWNSLISGYVRVGA-AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G IH + K+G + V L+ Y+K +A K+F M +NV+++ MIS
Sbjct: 270 KGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Query: 234 -MNR------EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
M+ +A LF +M+ G+ P+ TF ++ A S ++ GR IH L K NF
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S+ + + LI +YA S +D + F S ++I SW ++I + QN +A F
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ +P YT +++A A+ +L G++ + IK G+D+ V ++ + MY K
Sbjct: 450 LFSSHIRPEEYTVSLMMSA--CADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKS 507
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G++ + +VF E Q ++A+IS+LA+HG +N F+ M+ G++P+ FL VL
Sbjct: 508 GNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVL 567
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
C G++ +G F M DY I P+ H++C+VD+LGR GRL +AE L+
Sbjct: 568 IACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDH 627
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
++LL +CR++ + +G+R+A+ LM++EP SGSYVL+ N+Y + G +R+
Sbjct: 628 PVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVREL 687
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
M+ +GV+KE SW +G + H F+ D +HP S+ IY M E +
Sbjct: 688 MRDRGVKKEPALSWIVIG--NQTHSFAVADLSHPSSQMIYTMLETM 731
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 203/626 (32%), Positives = 336/626 (53%), Gaps = 73/626 (11%)
Query: 79 LHSLIVKFGLDSE-VYVGNALITMYSRWGRLVEARRVFDEMPN----------------- 120
+H LI+K L + ++ N L+T Y++ GRL ARRVFDEMP+
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 121 --------------KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA 166
+D+VS+NA+++G++ G L + + +R ++ ++
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK-------------------- 206
+ LG +H +++G+G + VG+ L+ Y+K
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 207 -----------CEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDG 250
C++ DA +F+ M DR+ I+WTTM++ + +A+ +F+ MR +G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V + TF ++ A ++EG+ IH +T + V + L+ MY++ S++ +E
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAE 369
VF ++CR IISW A+I GY QN S AV+AF + + KP+ +T GSV+++ A
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISS--CAN 391
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL+ G + H + GL V +AL+ +YGK GSI ++ R+F+E + +WTA+
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
++ A+ G + ++ F++M G++PD +TF+ VL+ C R G++ KG FDSM KD+
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHG 511
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I P DHY+CM+D+ R GR +EAEE + Q+P P +LL +CR+ GN+E+G+ A
Sbjct: 512 IVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAA 571
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
+ L++ +P SYVL+ +++A KG W VA LR+GM+ + V+KE G SW + + +H
Sbjct: 572 ENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSW--IKYKNKVH 629
Query: 610 GFSSGDNTHPRSEEIYRMAECLGSEM 635
FS+ D +HP S IY E L S+M
Sbjct: 630 IFSADDQSHPFSSRIYEKLEWLNSKM 655
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 168/649 (25%), Positives = 285/649 (43%), Gaps = 120/649 (18%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS-DDALSFALRMNLI---GVVFDAVTYSTALSFCLDHE 71
+F ++ D VS+N +++GF + A S L L+ V +T S +
Sbjct: 101 LFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160
Query: 72 GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP------------ 119
G +H +++ G + +VG+ L+ MY++ G + +ARRVF EM
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220
Query: 120 -------------------NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
++DS++W +++G TQ+G +EA+ M +G+ +D
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG-LQLEALDVFRRMRAEGVGIDQY 279
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+F S +ACG LE GKQIH + Y +V VG+ L+ YSKC A VFRRM
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 221 HDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
RN+ISWT MI + E+AV F EM++DG+ P+D T +I + + ++EG
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
H L + + + +V N L+T+Y + S++D+ ++FDE+S + +SW AL++GYAQ G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 336 LSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
+ + F ++ KP+ TF VL+A A +++ G D
Sbjct: 460 KAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAG-------------LVEKGCD----- 501
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFA-----WTAIISALARHGDYESVMNQFKEM 449
F+ Q+ +T +I +R G ++ K+M
Sbjct: 502 -------------------YFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQM 542
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVG 508
+ PD+ + ++L+ C G + G+ +++L+ +P +P Y + M G
Sbjct: 543 PHS---PDAFGWATLLSSCRLRGNMEIGKWAAENLLE---TDPQNPASYVLLCSMHAAKG 596
Query: 509 RLEEAEELV-----GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSY 563
+ E L Q+ PG S ++ ++H + A S+
Sbjct: 597 QWTEVAHLRRGMRDRQVKKEPGCSWIKY---KNKVH---------------IFSADDQSH 638
Query: 564 VLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFS 612
S +Y EK +W L M +G + +V DV D D +H S
Sbjct: 639 PFSSRIY-EKLEW-----LNSKMAEEGYKPDVSSVLHDVADADKVHMIS 681
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 118/248 (47%), Gaps = 20/248 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K A +F + +I+SW ++ G+ + S++A+ M + G+ D
Sbjct: 320 VDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDD 379
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + +S C + G Q H L + GL + V NAL+T+Y + G + +A R+FDE
Sbjct: 380 FTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDE 439
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D VSW A+++GY Q G E I +M+ GL+ D V+F SAC +E
Sbjct: 440 MSFHDQVSWTALVTGYAQFGK-AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEK 498
Query: 178 G-------KQIHG-VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISW 228
G ++ HG V I Y ++ YS+ +A + ++M H + W
Sbjct: 499 GCDYFDSMQKDHGIVPIDDHY-------TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGW 551
Query: 229 TTMISMNR 236
T++S R
Sbjct: 552 ATLLSSCR 559
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 358/646 (55%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G A +F+ + ++VS+ +V++G+ ++ +A++ L+M +V D
Sbjct: 106 LSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQ 165
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + + C + G QLH+ ++K S + NALI MY R+ ++ +A +VF
Sbjct: 166 FAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYG 225
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLE 176
+P KD +SW++I++G++Q G + EA+ L EM+ G+ + F S+ AC +
Sbjct: 226 IPAKDLISWSSIIAGFSQLG-FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 284
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--M 234
G QIHG+ IK+ + G L Y++C A +VF ++ + SW +I+
Sbjct: 285 YGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLA 344
Query: 235 NR---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N ++AVS+F EMR G P+ ++ L+ A + + +G IH IK FL++ S
Sbjct: 345 NNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLS 404
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAF-FGVIK 349
VCN L+TMY + +F++ + + +SWNA+++ Q+ + ++ F ++
Sbjct: 405 VCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVS 464
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
E +P+ T G++L G E SLK G + H + K GL + + + L+DMY K GS+
Sbjct: 465 ECEPDHITMGNLLR--GCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLR 522
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++R+F+ +W+ +I A+ G E + F+EM++ G+ P+ +TF+ VLT C
Sbjct: 523 QARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACS 582
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G L+ M ++ I P+ +H SC+VD+L R G L EAE + ++ P + V
Sbjct: 583 HVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVW 642
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LL AC+ GNV++ ++ A+ ++K++P S ++VL+ +++A G+WE A+LR MK
Sbjct: 643 KTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEDAALLRSSMKKH 702
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
V+K G SW DV D +H F + D HP ++IY + + S+M
Sbjct: 703 DVKKIPGQSWIDVE--DKIHIFFAEDVLHPERDDIYTVLHNIWSQM 746
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 136/266 (51%), Gaps = 5/266 (1%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T+I LI A S + +GR IH + +N + + N +++MY + S++D+ +VFD +
Sbjct: 66 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 125
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKH 375
R ++S+ ++I+GY+QNG A+ + +++ + P+ + FGS++ A A D+ L
Sbjct: 126 PERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVL-- 183
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G++ H+ +IK+ S I +AL+ MY + + ++ +VF K +W++II+ ++
Sbjct: 184 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQ 243
Query: 436 HGDYESVMNQFKEMENKGV-RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
G ++ KEM + GV P+ F S L C G + +K + +
Sbjct: 244 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK-LELTGNA 302
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQI 520
+ DM R G L+ A + QI
Sbjct: 303 IAGCSLCDMYARCGFLDSARRVFNQI 328
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
N I+ +N A++AF K S K T+ S++ A ++ SL G++ H H
Sbjct: 32 NDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSR--SLAQGRKIHDH 89
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
I+ D I+ + +L MYGK GS+ +++ VF+ E++ ++T++I+ +++G
Sbjct: 90 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEA 149
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD--HYSCM 500
+ + +M + PD F S++ C G + G+ L ++K +E S + +
Sbjct: 150 ITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIK---LESSSHLIAQNAL 206
Query: 501 VDMLGRVGRLEEAEELVGQIPG 522
+ M R ++ +A ++ IP
Sbjct: 207 IAMYVRFNQMSDASKVFYGIPA 228
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/626 (32%), Positives = 336/626 (53%), Gaps = 73/626 (11%)
Query: 79 LHSLIVKFGLDSE-VYVGNALITMYSRWGRLVEARRVFDEMPN----------------- 120
+H LI+K L + ++ N L+T Y++ GRL ARRVFDEMP+
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 121 --------------KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA 166
+D+VS+NA+++G++ G L + + +R ++ ++
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK-------------------- 206
+ LG +H +++G+G + VG+ L+ Y+K
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 207 -----------CEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDG 250
C++ DA +F+ M DR+ I+WTTM++ + +A+ +F+ MR +G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V + TF ++ A ++EG+ IH +T + V + L+ MY++ S++ +E
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAE 369
VF ++CR IISW A+I GY QN S AV+AF + + KP+ +T GSV+++ A
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISS--CAN 391
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL+ G + H + GL V +AL+ +YGK GSI ++ R+F+E + +WTA+
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
++ A+ G + ++ F++M G++PD +TF+ VL+ C R G++ KG FDSM KD+
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHG 511
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I P DHY+CM+D+ R GR +EAEE + Q+P P +LL +CR+ GN+E+G+ A
Sbjct: 512 IVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAA 571
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
+ L++ +P SYVL+ +++A KG W VA LR+GM+ + V+KE G SW + + +H
Sbjct: 572 ENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSW--IKYKNKVH 629
Query: 610 GFSSGDNTHPRSEEIYRMAECLGSEM 635
FS+ D +HP S IY E L S+M
Sbjct: 630 IFSADDQSHPFSSRIYEKLEWLNSKM 655
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 169/644 (26%), Positives = 285/644 (44%), Gaps = 110/644 (17%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS-DDALSFALRMNLI---GVVFDAVTYSTALSFCLDHE 71
+F ++ D VS+N +++GF + A S L L+ V +T S +
Sbjct: 101 LFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160
Query: 72 GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP------------ 119
G +H +++ G + +VG+ L+ MY++ G + +ARRVF EM
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220
Query: 120 -------------------NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
++DS++W +++G TQ+G +EA+ M +G+ +D
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG-LQLEALDVFRRMRAEGVGIDQY 279
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+F S +ACG LE GKQIH + Y +V VG+ L+ YSKC A VFRRM
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 221 HDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
RN+ISWT MI + E+AV F EM++DG+ P+D T +I + + ++EG
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
H L + + + +V N L+T+Y + S++D+ ++FDE+S + +SW AL++GYAQ G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 336 LSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
+ + F ++ KP+ TF VL+A A +++ G D
Sbjct: 460 KAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAG-------------LVEKGCD----- 501
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
D K I + +T +I +R G ++ K+M +
Sbjct: 502 ---YFDSMQKDHGIV-----------PIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHS-- 545
Query: 455 RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVGRLEEA 513
PD+ + ++L+ C G + G+ +++L+ +P +P Y + M G+ E
Sbjct: 546 -PDAFGWATLLSSCRLRGNMEIGKWAAENLLE---TDPQNPASYVLLCSMHAAKGQWTEV 601
Query: 514 EELV-----GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSN 568
L Q+ PG S ++ ++H + A S+ S
Sbjct: 602 AHLRRGMRDRQVKKEPGCSWIKY---KNKVH---------------IFSADDQSHPFSSR 643
Query: 569 LYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFS 612
+Y EK +W L M +G + +V DV D D +H S
Sbjct: 644 IY-EKLEW-----LNSKMAEEGYKPDVSSVLHDVADADKVHMIS 681
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 175/343 (51%), Gaps = 25/343 (7%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVT 59
+ CK + A +F + + D ++W T+++G ++ +AL RM GV D T
Sbjct: 223 LRCK--MIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ + L+ C G Q+H+ I + + V+VG+AL+ MYS+ + A VF M
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ +SW A++ GY Q+ EA+ A EM G++ D + S S+C + +LE G
Sbjct: 341 CRNIISWTAMIVGYGQNA-CSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----M 234
Q H +++ G +++V N L++ Y KC DA+++F M + +SWT +++
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-------RMIHGLCIKTNFL 287
++ + LF++M +G+ P+ VTFIG++ A S LV++G + HG+ +
Sbjct: 460 KAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHY 519
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALIS 329
+ C+I +Y+R +++E+ ++ + W L+S
Sbjct: 520 T------CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 118/248 (47%), Gaps = 20/248 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K A +F + +I+SW ++ G+ + S++A+ M + G+ D
Sbjct: 320 VDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDD 379
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + +S C + G Q H L + GL + V NAL+T+Y + G + +A R+FDE
Sbjct: 380 FTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDE 439
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D VSW A+++GY Q G E I +M+ GL+ D V+F SAC +E
Sbjct: 440 MSFHDQVSWTALVTGYAQFGK-AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEK 498
Query: 178 G-------KQIHG-VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISW 228
G ++ HG V I Y ++ YS+ +A + ++M H + W
Sbjct: 499 GCDYFDSMQKDHGIVPIDDHY-------TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGW 551
Query: 229 TTMISMNR 236
T++S R
Sbjct: 552 ATLLSSCR 559
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 225/675 (33%), Positives = 348/675 (51%), Gaps = 47/675 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG------FEKSDDALSFALRMNLIGVV 54
+NMY K G A +F+++ + D VSWN++++ +E S L N+
Sbjct: 374 VNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTS 433
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
F V+ + A S G G Q+H+ ++ G D Y NAL+TMY+R GR+ +A+ +
Sbjct: 434 FTLVSVAHACSHV--RGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKAL 490
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F KD VSWN ++S +Q+ D EA++ + M+ G+R D V+ S AC +
Sbjct: 491 FGVFDGKDLVSWNTVISSLSQN-DRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLER 549
Query: 175 LELGKQIHGVSIKMGYGTHVS-VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L +G++IH +++ G S VG L+ Y C+ VF + R V W +++
Sbjct: 550 LRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLA 609
Query: 234 ---MNRED--AVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
N D A+ LF EM + CPN TF ++ A + + IHG +K F
Sbjct: 610 GYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFG 669
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ V N L+ MY+R ++ S+ +F ++ R+I+SWN +I+G G A+ +
Sbjct: 670 KDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEM 729
Query: 348 IKES-------------------KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
+ KPN+ T +VL G A +L G+ H++ +K L
Sbjct: 730 QRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLP--GCAALAALGKGKEIHAYAVKQKL 787
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
D VGSAL+DMY K G + + RVF++ ++ W +I A HG E + F+
Sbjct: 788 AMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRI 847
Query: 449 MENKG------VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
M G +RP+ +T++++ C +GM+ +G HLF +M + +EP DHY+C+VD
Sbjct: 848 MTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVD 907
Query: 503 MLGRVGRLEEAEELVGQIPGGPG-LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG 561
+LGR GR++EA EL+ +P + SLLGACRIH +VE GE A L +EP +
Sbjct: 908 LLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVAS 967
Query: 562 SYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRS 621
YVLMSN+Y+ G W+ +RK MK GVRKE G SW + G D +H F SGD +HP+S
Sbjct: 968 HYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHG--DEVHKFLSGDASHPQS 1025
Query: 622 EEIYRMAECLGSEMK 636
+E++ E L M+
Sbjct: 1026 KELHEYLETLSQRMR 1040
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 170/570 (29%), Positives = 269/570 (47%), Gaps = 46/570 (8%)
Query: 24 DIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLI 83
D++ T S F DA+S M D + L G Q+H+ +
Sbjct: 300 DLLRSQTHSSSFR---DAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHV 356
Query: 84 VKFG--LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGV 141
KFG S V V N+L+ MY + G L AR+VFD++P++D VSWN++++ + ++
Sbjct: 357 FKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEW-- 414
Query: 142 EAILALIEMMRKGLRLDHVSFT--SAASACGHEK-NLELGKQIHGVSIKMGYGTHVSVGN 198
E L L +M +D SFT S A AC H + + LGKQ+H +++ G N
Sbjct: 415 ELSLHLFRLMLSE-NVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNN 472
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCP 253
L++ Y++ DA +F ++++SW T+IS E+A+ M +DGV P
Sbjct: 473 ALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRP 532
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS-VCNCLITMYARFESMQDSEKV 312
+ VT ++ A S ++ GR IH ++ L E S V L+ MY + + V
Sbjct: 533 DGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLV 592
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAED 370
FD + R + WNAL++GYA+N A++ F +I ES+ PNA TF SVL A +
Sbjct: 593 FDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKV 652
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
S K G H +I+K G D V +AL+DMY + G + S+ +F ++ +W +I
Sbjct: 653 FSDKEG--IHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMI 710
Query: 431 SALARHGDYESVMNQFKEMENK----------------GV--RPDSITFLSVLTVCGRNG 472
+ G Y+ +N EM+ + GV +P+S+T ++VL C
Sbjct: 711 TGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALA 770
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+ KG+ + +K + S +VDM + G L A + Q+P + L
Sbjct: 771 ALGKGKEIHAYAVKQ-KLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NVITWNVL 828
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGS 562
+ A +HG GE A L ++ AG GS
Sbjct: 829 IMAYGMHGK---GEE-ALELFRIMTAGGGS 854
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 357/646 (55%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G A +F+ + ++VS+ +V++G+ ++ +A+ L+M +V D
Sbjct: 109 LSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQ 168
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + + C G QLH+ ++K S + NALI MY R+ ++ +A RVF
Sbjct: 169 FAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYG 228
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLE 176
+P KD +SW++I++G++Q G + EA+ L EM+ G+ + F S+ AC +
Sbjct: 229 IPMKDLISWSSIIAGFSQLG-FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--M 234
G QIHG+ IK + G L Y++C A +VF ++ + SW +I+
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 235 NR---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N ++AVS+F +MR G P+ ++ L+ A + + +G IH IK FL++ +
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLT 407
Query: 292 VCNCLITMYARFESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAF-FGVIK 349
VCN L+TMY + +F++ + + +SWN +++ Q+ + ++ F ++
Sbjct: 408 VCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVS 467
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
E +P+ T G++L G E SLK G + H + +K GL + + + L+DMY K GS+
Sbjct: 468 ECEPDHITMGNLLR--GCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLG 525
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++R+F+ + +W+ +I A+ G E + FKEM++ G+ P+ +TF+ VLT C
Sbjct: 526 QARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACS 585
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G L+ +M ++ I P+ +H SC+VD+L R GRL EAE + ++ P + V
Sbjct: 586 HVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVW 645
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LL AC+ GNV + ++ A+ ++K++P S ++VL+ +++A G+WE A+LR MK
Sbjct: 646 KTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKH 705
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
V+K G SW ++ D +H F + D HP ++IY + + S+M
Sbjct: 706 DVKKIPGQSWIEIE--DKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 137/266 (51%), Gaps = 5/266 (1%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T+I LI A S + +GR IH + +N + + N +++MY + S++D+ +VFD +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKH 375
R ++S+ ++I+GY+QNG A++ + +++E P+ + FGS++ A ++ D+ L
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL-- 186
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G++ H+ +IK+ S I +AL+ MY + + ++ RVF K +W++II+ ++
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 436 HGDYESVMNQFKEMENKGV-RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
G ++ KEM + GV P+ F S L C G + +K + +
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS-ELAGNA 305
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQI 520
+ DM R G L A + QI
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQI 331
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
N I+ ++ A++AF K S K T+ S++ A ++ SL G++ H H
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSR--SLAQGRKIHDH 92
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
I+ D I+ + +L MYGK GS+ +++ VF+ E++ ++T++I+ +++G
Sbjct: 93 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD--HYSCM 500
+ + +M + + PD F S++ C + + G+ L ++K +E S + +
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK---LESSSHLIAQNAL 209
Query: 501 VDMLGRVGRLEEAEELVGQIP 521
+ M R ++ +A + IP
Sbjct: 210 IAMYVRFNQMSDASRVFYGIP 230
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 210/654 (32%), Positives = 353/654 (53%), Gaps = 22/654 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MYCK + A +F+ + +I+S+N+++SG+ + + A+ L + D T
Sbjct: 92 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFT 151
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y+ AL FC + FG LH L+V GL +V++ N LI MYS+ G+L +A +FD
Sbjct: 152 YAGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCN 211
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG---HEKNLE 176
+D VSWN+++SGY + G E + L +M R GL+L + S AC +E +E
Sbjct: 212 ERDQVSWNSLISGYVRVGA-AEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLME 270
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--M 234
G IH + K+G + V L+ Y+K +A K+F M +NV+++ MIS +
Sbjct: 271 KGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFL 330
Query: 235 NRED--------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+D A LF EM+ G+ P+ TF ++ A S ++ GR IH L K NF
Sbjct: 331 QMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 390
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S+ + + LI +YA S +D + F S ++I SW ++I + QN +A F
Sbjct: 391 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQ 450
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ +P YT +++A A+ +L G++ + IK G+D+ V ++ + MY K
Sbjct: 451 LFSSPIRPEEYTVSLMMSA--CADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKS 508
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G++ + +VF E Q ++A+IS+LA+HG +N F+ M+ +G++P+ FL VL
Sbjct: 509 GNMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVL 568
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
C G++ G + F +M Y I P+ H++C+ D+LGR GRL +AE L+
Sbjct: 569 IACCHGGLVTHGVNYFQTMKNSYGINPNEKHFTCLADLLGRTGRLSDAENLILSSGFQDH 628
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ ++LL +CR++ + +G+R+A+ LM++EP SGSYVL+ N+Y + G +R+
Sbjct: 629 PVMWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVREL 688
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLN 639
M+ +GV+KE SW +G + H F+ D +HP S+ IY M + + + + +++
Sbjct: 689 MRDRGVKKEPALSWIVLG--NQTHSFAVADWSHPSSQMIYTMLDTMNTVVDFVD 740
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 165/345 (47%), Gaps = 22/345 (6%)
Query: 153 KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD 212
K LD ++ +L LGK HG +K + + N L++ Y KC G
Sbjct: 42 KNTALDSEAYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGF 101
Query: 213 ANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISI 267
A ++F RM +RN+IS+ ++IS E A+ LF E R D + + T+ G +
Sbjct: 102 ARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGE 161
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
+ G+++HGL + + + N LI MY++ + + +FD + R+ +SWN+L
Sbjct: 162 RCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSL 221
Query: 328 ISGY-----AQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNA--VGAAEDISLKHGQRCH 380
ISGY A+ L+L A G+ K Y GSVL A + E + ++ G H
Sbjct: 222 ISGYVRVGAAEEPLNLLAKMHRAGL----KLTTYALGSVLKACCINLNEGL-MEKGMAIH 276
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY- 439
+ K+G++ D +V +ALLDMY K GS+ E+ ++F+ K+ + A+IS + D
Sbjct: 277 CYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDIT 336
Query: 440 ----ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
F EM+ +G+ P TF VL C + GR +
Sbjct: 337 DEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 381
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 205/634 (32%), Positives = 350/634 (55%), Gaps = 18/634 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
M+ G ++A IFN +N D +SWN+++S ++ +++ + M L+ + T
Sbjct: 204 MFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTT 263
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
S LS C + +G +H L VK+GL+S + + N L+++YS GR +A +F MP
Sbjct: 264 LSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMP 323
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D +SWN++L+ Y QDG + A+ EM+ +++V+FTSA +AC + GK
Sbjct: 324 ERDLISWNSMLACYVQDGR-CLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGK 382
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMNR 236
+HG + +G + +GN L++ Y KC +A KVF+RM + ++W +I + N
Sbjct: 383 ILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNA 442
Query: 237 E--DAVSLFKEMRLDGVCPND-VTFIGLI-HAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E +AV+ FK MR D +T + ++ ++ +L+K G IH + T F + V
Sbjct: 443 ELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHV 502
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LITMYA+ + S +FD+L + WNA+I+ A+ G A++ +
Sbjct: 503 QSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGI 562
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ + + F + L+ AA+ L+ GQ+ H IK+G + D + +A +DMYGK G + ++
Sbjct: 563 EFDQFNFSTALSV--AADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDA 620
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
R+ + ++S +W +IS ARHG + F +M GV+P+ ++F+ +L+ C
Sbjct: 621 LRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHG 680
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G + SM Y I+P +H CM+D+LGR GRL EAE + ++P P V +S
Sbjct: 681 GLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRS 740
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL +CRI+ N+++G + A L++++P+ +YVL SN++A G WE V +R M + +
Sbjct: 741 LLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKI 800
Query: 592 RKEVGFSWAD-VGDIDGLHGFSSGDNTHPRSEEI 624
+K+ SW G+I F GD THP+ E+I
Sbjct: 801 QKKPAHSWVKWKGNIS---IFGMGDQTHPQMEQI 831
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 161/571 (28%), Positives = 287/571 (50%), Gaps = 26/571 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y G A +FN + + ++VSW +++ + + + ++ RM G+ +
Sbjct: 101 VHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNE 160
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ +S C + G QL +KFGL+++V N+LI M+ G + EA +F+E
Sbjct: 161 NNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNE 220
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA---SACGHEKN 174
M +D++SWN+I+S Q+ + E MR L + +++T+ + S CG
Sbjct: 221 MNERDTISWNSIISANAQNTLH--EESFRYFHWMR--LVHEEINYTTLSILLSICGSVDY 276
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L+ GK +HG+++K G +++ + N L+S YS + DA +FRRM +R++ISW +M++
Sbjct: 277 LKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLAC 336
Query: 235 NRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+D A+ +F EM N VTF + A G+++HG + E
Sbjct: 337 YVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDE 396
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ N LIT Y + M +++KVF + + ++WNALI G+A N AV A F +++
Sbjct: 397 LIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAA-FKLMR 455
Query: 350 ESKPNAYTFGSVLNAVGAA---EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
E + + +++N +G+ ED+ +K+G H+H + G D D V S+L+ MY K G
Sbjct: 456 EGSTSGVDYITIVNILGSCLTHEDL-IKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCG 514
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ S +F++ K+ W AII+A AR+G E + M + G+ D F + L+
Sbjct: 515 DLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALS 574
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPGGP 524
V M+ +G+ L S +K + DH+ + +DM G+ G L++A ++ Q
Sbjct: 575 VAADLAMLEEGQQLHGSTIK---LGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRS 631
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKM 555
LS +L+ HG + ++K+
Sbjct: 632 RLS-WNTLISISARHGQFHKAKETFHDMLKL 661
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 152/578 (26%), Positives = 280/578 (48%), Gaps = 38/578 (6%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVT 59
MY K G+ + A +F+ ++ + SWN ++SG+ + +A+ F + IG+
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 60 YSTALSFC-----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
++ ++ C + EGF Q H +K GL +V+VG + + Y+ +G + A+++
Sbjct: 61 IASLVTACNKSSIMAKEGF----QFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKM 116
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F+EMP+++ VSW +++ Y+ +G E I M +G+ + + S+CG +
Sbjct: 117 FNEMPDRNVVSWTSLMVSYSDNGSKK-EVINTYKRMRHEGICCNENNIALVISSCGFLMD 175
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
+ LG Q+ G ++K G T VS N L+ + C +A +F M++R+ ISW ++IS
Sbjct: 176 IILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISA 235
Query: 235 N-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
N E++ F MRL N T L+ + +K G+ +HGL +K S
Sbjct: 236 NAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESN 295
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+CN L+++Y+ +D+E +F + R++ISWN++++ Y Q+G L A++ F ++
Sbjct: 296 ICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLW 355
Query: 350 ESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
K N TF S L A E + +G+ H ++ +GL + I+G+ L+ YGK +
Sbjct: 356 MKKEINYVTFTSALAACLDPEFFT--NGKILHGFVVVLGLQDELIIGNTLITFYGKCHKM 413
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTV 467
E+++VF + + W A+I A + + + FK M E D IT +++L
Sbjct: 414 AEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGS 473
Query: 468 CG------RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
C + G+ + D H++ S ++ M + G L + + Q+
Sbjct: 474 CLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSS------LITMYAKCGDLHSSSYIFDQLV 527
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
SV +++ A +G GE +++M AG
Sbjct: 528 FKTS-SVWNAIIAANARYG---FGEEALKLVVRMRSAG 561
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/536 (24%), Positives = 252/536 (47%), Gaps = 59/536 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+++Y +G+ A IF + D++SWN++L+ + + AL M + +
Sbjct: 303 LSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINY 362
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+++AL+ CLD E F G LH +V GL E+ +GN LIT Y + ++ EA++VF
Sbjct: 363 VTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQR 422
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR--LDHVSFTSAASAC-GHEKN 174
MP D V+WNA++ G+ + + EA+ A ++MR+G +D+++ + +C HE
Sbjct: 423 MPKLDKVTWNALIGGFANNAELN-EAVAAF-KLMREGSTSGVDYITIVNILGSCLTHEDL 480
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
++ G IH ++ G+ V + L++ Y+KC ++ +F ++ + W +I+
Sbjct: 481 IKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAA 540
Query: 235 NR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
N E+A+ L MR G+ + F + + +++EG+ +HG IK F +
Sbjct: 541 NARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELD 600
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ N + MY + + D+ ++ + + R +SWN LIS A++G A + F ++K
Sbjct: 601 HFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLK 660
Query: 350 ES-KPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
KPN +F +L+A G ++ + + I+ G++ ++D+ G+
Sbjct: 661 LGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEH----CVCMIDLLGRS 716
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + E++ E + P+ + + S+L
Sbjct: 717 GRLVEAEAFITEMP----------------------------------IPPNDLVWRSLL 742
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH-YSCMVDMLGRVGRLEEAEELVGQI 520
C + GR +L+ ++PS D Y ++ +GR E+ E++ GQ+
Sbjct: 743 ASCRIYRNLDLGRKAAKHLLE---LDPSDDSAYVLYSNVFATIGRWEDVEDVRGQM 795
>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
Length = 917
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 341/579 (58%), Gaps = 19/579 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M MY G+ D A F+ + D +SWNT++SG ++ D+A+ RM G+ D
Sbjct: 348 MTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDK 407
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + + + L L+V+ G++ +V++ +ALI M+SR+G + EAR +FD+
Sbjct: 408 FTFISIIDGTARMQEAKI---LSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDD 464
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M ++D V W +I+S Y Q G + L +MR +GL + + +A +AC L
Sbjct: 465 MKDRDIVMWTSIISSYVQHGSS--DDALGCTRLMRLEGLMGNDFTLVTALNACASLTALS 522
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--M 234
GK IH +I+ G+ +VGN L++ Y+KC +A+ VF + +N++SW T+ + +
Sbjct: 523 EGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQC-GKNLVSWNTIAAAYV 581
Query: 235 NRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
R+ +A+ LF+EM+L+G+ + V+F+ +++ S + EG IH + ++T S+
Sbjct: 582 QRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSAS---EGSKIHNILLETGMESDHI 638
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+ MY +S+ ++ ++F + R+I+SWNA+I+G A++GLS A+Q F + E
Sbjct: 639 VSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEG 698
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ +F +VLNA + SLK + I G ++D IVG+A++ M+G+ G + E
Sbjct: 699 VAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAE 758
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++R F +E+ +W I++A A+HG+ E + F+ M+ + RPDSIT +SVL+ C
Sbjct: 759 ARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSH 818
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+I +G + F SM +++ I S +HY C+VD+L R GRL++AEEL+ ++P +
Sbjct: 819 GGLIEEGYYHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWM 878
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNL 569
+LL AC++ G+ + +R+A+ +M+++P +YV++S++
Sbjct: 879 TLLSACKVQGDEKRAKRVAERVMELDPRRPAAYVVLSSV 917
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/485 (31%), Positives = 269/485 (55%), Gaps = 31/485 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY K G + A +F+ L D+VSW +++ + + D +AL RM GV+ +
Sbjct: 145 IKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNR 204
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+TY+TA+S C E G +HS +++ G +S+V V A++ MY + G L +AR VF+
Sbjct: 205 ITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFER 264
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEM-MRKGLRLDHVSFTSAASACGHEKNLE 176
MP+ ++VSWNAI++ TQ G VEA+ M ++ G D V+F + +AC L
Sbjct: 265 MPHPNTVSWNAIVAACTQHG-CCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLT 323
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+ ++ ++ GY TH+ VGN +M+ YS C +A F M +R+ ISW T+IS +
Sbjct: 324 FGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHA 383
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +AV LF+ M +G+ P+ TFI +I + ++E +++ L +++ +
Sbjct: 384 QAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTA---RMQEAKILSELMVESGVELDVF 440
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS--------LAAVQA 343
+ + LI M++R+ +++++ +FD++ R+I+ W ++IS Y Q+G S L ++
Sbjct: 441 LVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEG 500
Query: 344 FFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
G N +T + LNA A +L G+ HSH I+ G + P VG+AL++MY
Sbjct: 501 LMG-------NDFTLVTALNA--CASLTALSEGKLIHSHAIERGFAASPAVGNALINMYA 551
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G + E+ VF++ K+ +W I +A + + + F+EM+ +G++ D ++F++
Sbjct: 552 KCGCLEEADLVFHQCG-KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVT 610
Query: 464 VLTVC 468
VL C
Sbjct: 611 VLNGC 615
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/529 (28%), Positives = 281/529 (53%), Gaps = 17/529 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + A+ +F +L++P VSWN++L+ F + A RM L G+ D
Sbjct: 44 IHMYGKCGCVEDAVTVFQSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDR 103
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ T L C G LH +++ GL+ V VG +LI MY + G + +ARRVFD+
Sbjct: 104 ITFVTVLDGCTATGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDK 163
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +D VSW +++ Y Q D VEA+ M G+ + +++ +A SAC H +++
Sbjct: 164 LALQDVVSWTSMIMTYVQH-DRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMAD 222
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GK IH ++ G+ + V V +++ Y KC DA +VF RM N +SW +++ +
Sbjct: 223 GKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQ 282
Query: 238 -----DAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+A+ F+ M+L G P+ VTFI +++A S + G +++ ++ + +
Sbjct: 283 HGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLI 342
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V NC++TMY+ + ++ F + R+ ISWN +ISG+AQ G AV F ++ E
Sbjct: 343 VGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEG 402
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ +TF S+++ ++ + +++ G++ D + SAL++M+ + G++ E
Sbjct: 403 ITPDKFTFISIIDGTA-----RMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVRE 457
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F++ +++ WT+IIS+ +HG + + + M +G+ + T ++ L C
Sbjct: 458 ARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACAS 517
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
+ +G+ L S + SP + +++M + G LEEA+ + Q
Sbjct: 518 LTALSEGK-LIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQ 565
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 231/468 (49%), Gaps = 14/468 (2%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T+ L C G +HS + + V NA I MY + G + +A VF
Sbjct: 1 DRGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVF 60
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ + VSWN++L+ + +DG + +A M +GL D ++F + C +L
Sbjct: 61 QSLDHPSQVSWNSLLAAFARDGQF-QQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDL 119
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
GK +HG ++ G +V VG L+ Y KC DA +VF ++ ++V+SWT+MI
Sbjct: 120 SRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTY 179
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A+ LF MR GV PN +T+ I A + + +G++IH ++ F S+
Sbjct: 180 VQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDV 239
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V ++ MY + S++D+ +VF+ + +SWNA+++ Q+G + A+ F + +
Sbjct: 240 VVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQ 299
Query: 351 --SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S P+ TF ++LNA + +L G+ + I++ G D+ IVG+ ++ MY G I
Sbjct: 300 GGSTPDKVTFITILNACSSPA--TLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRI 357
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ F+ E+ +W IIS A+ G + ++ F+ M +G+ PD TF+S++
Sbjct: 358 DNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGT 417
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
R + + ++ + +E S +++M R G + EA L
Sbjct: 418 AR----MQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSL 461
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
Query: 359 GSVLNAVG-AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
G+ L +G A+ ++ G+ HS + D +V +A + MYGK G + ++ VF
Sbjct: 3 GTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQS 62
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
S+ +W ++++A AR G ++ F+ M+ +G+ PD ITF++VL C G + +G
Sbjct: 63 LDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRG 122
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ L + + +E + + ++ M G+ G +E+A + ++
Sbjct: 123 K-LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKL 164
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 211/645 (32%), Positives = 343/645 (53%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+ MY +G A F+ + D V WN ++ G K+ D A+ M G +
Sbjct: 183 VKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNF 242
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + LS C L G QLHSL VK GL+ EV V N L+ MY++ L +A R+F+
Sbjct: 243 ATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFEL 302
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D V+WN ++SG Q+G + VEA +M R G R D ++ S A L+
Sbjct: 303 MPQDDLVTWNGMISGCVQNGLF-VEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQ 361
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
GK++HG ++ V + + L+ Y KC A ++ +V+ +TMIS +
Sbjct: 362 GKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVL 421
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N E+A+ +F+ + + PN VT ++ + + G+ IHG ++ + + V
Sbjct: 422 NGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYV 481
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ L+ MYA+ + S +F ++S ++ ++WN++IS ++QNG A+ F + E
Sbjct: 482 ESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGI 541
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
K N T + L+A + I +G+ H IK + +D SAL+DMY K G++ +
Sbjct: 542 KYNNITISAALSACASLPAI--YYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELA 599
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
RVF +K+E +W +IISA HG + ++ M+ +G +PD +TFL++++ C
Sbjct: 600 LRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHA 659
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G LF M K Y I P +H++CMVD+ R G+L++A + + +P P + +
Sbjct: 660 GLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGA 719
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACR+H NVE+ + + L K++PA SG YVLMSN+ A G W+ V+ +R+ MK +
Sbjct: 720 LLHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKI 779
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
K G+SW DV + H F + D +HP SE+IY + L E++
Sbjct: 780 LKIPGYSWVDVNNSS--HLFVASDKSHPESEDIYTSLKTLLQELR 822
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 284/558 (50%), Gaps = 21/558 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVS---WNTVLSGFEKSDD---ALSFALRM--NLIG 52
+ MY + +F A+ +F+ L S WN ++ GF + A+ F ++M +
Sbjct: 77 LGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAA 136
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
DA T + C G +H GL ++VYVG+AL+ MY+ G L AR
Sbjct: 137 PSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNAR 196
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGH 171
FD +P +D V WN ++ G + GD V+ + L MR G + + S C
Sbjct: 197 DAFDGIPERDCVLWNVMMDGCIKAGD--VDGAVRLFRNMRASGCEPNFATLACFLSVCAT 254
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+ +L G Q+H +++K G V+V N L++ Y+KC+ DA ++F M ++++W M
Sbjct: 255 DADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGM 314
Query: 232 ISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS + +A LF +M+ G P+ +T + L+ A++ N +K+G+ +HG ++
Sbjct: 315 ISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCV 374
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ + + L+ +Y + ++ ++ ++D +++ + +ISGY NG+S A+Q F
Sbjct: 375 NMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRY 434
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++++ KPNA T SVL G A +L GQ+ H ++++ + V SAL+DMY K
Sbjct: 435 LLEQCIKPNAVTIASVLP--GCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKC 492
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + S +F + +K E W ++IS+ +++G + ++ F++M +G++ ++IT + L
Sbjct: 493 GRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAAL 552
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C I+ G+ + +K I+ S ++DM + G LE A + +P
Sbjct: 553 SACASLPAIYYGKEIHGVTIKG-PIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNE 611
Query: 526 LSVLQSLLGACRIHGNVE 543
+S S++ A HG V+
Sbjct: 612 VS-WNSIISAYGAHGLVK 628
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 227/713 (31%), Positives = 367/713 (51%), Gaps = 73/713 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPD--IVSWNTVLS-----GFEKSDDALSFALRMNLIGV 53
++MY KAL + L+ + WN ++ GF +D L RM +G
Sbjct: 84 ISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGF--LEDVLQLYRRMQRLGW 141
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
D T+ L C + F G +H+++ G + V+VGN L++MY R G AR+
Sbjct: 142 RPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQ 201
Query: 114 VFDEMPNK---DSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASA 168
VFDEM + D VSWN+I++ Y Q GD + A + + E M + G+R D VS + A
Sbjct: 202 VFDEMRERGVGDLVSWNSIVAAYMQGGD-SIRA-MKMFERMTEDLGIRPDAVSLVNVLPA 259
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C GKQ+HG +++ G V VGN ++ Y+KC + +ANKVF RM ++V+SW
Sbjct: 260 CASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSW 319
Query: 229 TTMIS----MNRED------------------------------------AVSLFKEMRL 248
M++ + R D A+ +F++M L
Sbjct: 320 NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLL 379
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF---LSEPS----VCNCLITMYA 301
G PN VT + L+ + + G+ H IK ++P V N LI MY+
Sbjct: 380 CGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYS 439
Query: 302 RFESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKESK---PNAY 356
+ +S + + +FD + R +++W LI G AQ+G + A++ F +++ PNA+
Sbjct: 440 KCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAF 499
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVF 415
T L A A +L+ G++ H+++++ +S + V + L+DMY K G + ++ VF
Sbjct: 500 TISCALMA--CARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVF 557
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ +++ +WT++++ HG E + F EM+ + PD +TF+ VL C +GM+
Sbjct: 558 DNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVD 617
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
+G + F+ M KD+ + P +HY+CMVD+L R GRL+EA EL+ +P P +V +LL A
Sbjct: 618 QGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 677
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
CR++ NVE+GE A+ L+++E GSY L+SN+YA W+ VA +R MK+ G++K
Sbjct: 678 CRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRP 737
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
G SW V G F +GD +HP S++IY + L +K L + AL
Sbjct: 738 GCSW--VQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFAL 788
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 152/298 (51%), Gaps = 14/298 (4%)
Query: 200 LMSTYSKCEVTGDANKVFRRMH--DRNVISWTTMISMN-----REDAVSLFKEMRLDGVC 252
++S Y A V RR+H V W +I + ED + L++ M+ G
Sbjct: 83 IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 142
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ TF ++ A + G +H + + F V N L++MY R + +++ +V
Sbjct: 143 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQV 202
Query: 313 FDELSCR---EIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGA 367
FDE+ R +++SWN++++ Y Q G S+ A++ F + ++ +P+A + +VL A +
Sbjct: 203 FDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACAS 262
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
S G++ H + ++ GL D VG+A++DMY K G + E+ +VF + K +W
Sbjct: 263 VGAWS--RGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 320
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
A+++ ++ G ++ + F+++ + + + +T+ +V+ + G+ + +F ML
Sbjct: 321 AMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQML 378
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 115/230 (50%), Gaps = 14/230 (6%)
Query: 296 LITMYARFESMQDSEKVFDEL--SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
+I+MY F S + V L S + WN LI G +Q + + + +
Sbjct: 83 IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 142
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ YTF VL A G E S + G H+ + G + + VG+ L+ MYG+ G+ ++
Sbjct: 143 PDHYTFPFVLKACG--EIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 200
Query: 413 RVFNETQEKSE---FAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVC 468
+VF+E +E+ +W +I++A + GD M F+ M E+ G+RPD+++ ++VL C
Sbjct: 201 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 260
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEEL 516
G +G+ + L+ E D + + +VDM + G +EEA ++
Sbjct: 261 ASVGAWSRGKQVHGYALRSGLFE---DVFVGNAVVDMYAKCGMMEEANKV 307
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/562 (34%), Positives = 329/562 (58%), Gaps = 17/562 (3%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
GLQ+H+ V G ++ + N LI MY + R+ A VFD M ++ VSW A++ GY Q
Sbjct: 23 GLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQ 82
Query: 136 DGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
+G+ + LAL+ EM G++ + +F+++ ACG +E G QIHG+ +K G+
Sbjct: 83 EGN--AKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVS 140
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLD 249
VGN + YSKC G A +VF +M RN++SW MI+ N ++ LF+ M+
Sbjct: 141 VVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQ 200
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS--VCNCLITMYARFESMQ 307
G P++ TF + A ++ G IH I F + + ++ +YA+ +
Sbjct: 201 GEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLF 260
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLN-AVG 366
+++KVFD + + +ISW+ALI G+AQ G L A+ F ++ES N F VL+ +G
Sbjct: 261 EAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMD-LFRQLRESVSNVDGF--VLSIMMG 317
Query: 367 AAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
D++L + G++ H +I+KV D V ++++DMY K G E++R+F+E Q ++ +
Sbjct: 318 VFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVS 377
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
WT +I+ +HG E ++ F M+ G+ D + +L++L+ C +G+I + + F +
Sbjct: 378 WTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLC 437
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
++ ++P+ +HY+CMVD+LGR G+L+EA+ L+ + P + Q+LL ACR+HGN+E+G
Sbjct: 438 NNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIG 497
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
+ + L +M+ +YV+MSN+YAE G W+ +RK +K+KG++KE G SW ++
Sbjct: 498 REVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEIN-- 555
Query: 606 DGLHGFSSGDNTHPRSEEIYRM 627
+H F GD+THP +E+I+ M
Sbjct: 556 KEIHFFYGGDDTHPLTEKIHEM 577
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 147/538 (27%), Positives = 259/538 (48%), Gaps = 71/538 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDA 57
++MY K + D A +F+ + ++VSW ++ G+ + +A L+ M GV +
Sbjct: 46 IDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNE 105
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ST+L C G+Q+H + VK G + VGNA I MYS+ GR+ A +VF++
Sbjct: 106 FTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNK 165
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ VSWNA+++G+T +G+ G ++++ M +G D +FTS ACG +
Sbjct: 166 MPFRNLVSWNAMIAGHTHEGN-GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRG 224
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMST----YSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
G QIH I G+ +S+ N++ S Y+KC +A KVF R+ +N+ISW+ +I
Sbjct: 225 GTQIHASLITRGF--PISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQ 282
Query: 234 -----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG-----NLVKEGRMIHGLCIK 283
N +A+ LF+++R + V D G + +I +G LV++G+ +H +K
Sbjct: 283 GFAQEGNLLEAMDLFRQLR-ESVSNVD----GFVLSIMMGVFADLALVEQGKQMHCYILK 337
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ SV N +I MY + +++E++F E+ R ++SW +I+GY ++GL A+
Sbjct: 338 VPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHL 397
Query: 344 FFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
F + + G++ D + ALL
Sbjct: 398 F------------------------------------NRMQLDGIELDEVAYLALLSACS 421
Query: 404 KRGSIFESQRVF----NETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
G I ESQ F N Q K + ++ L R G + N +EN ++P+
Sbjct: 422 HSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNL---IENMKLKPNE 478
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ ++L+ C +G + GR + + + + +P +Y M ++ G +E E +
Sbjct: 479 GIWQTLLSACRVHGNLEIGREVGEILFR--MDTDNPVNYVMMSNIYAEAGYWKECERV 534
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 189/365 (51%), Gaps = 21/365 (5%)
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C + G Q+H ++ MG+G + + N L+ Y KC A VF RM +RNV+SW
Sbjct: 14 CSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSW 73
Query: 229 TTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
T ++ N + +++L EM GV PN+ TF + A +V+ G IHG+C+K
Sbjct: 74 TALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVK 133
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG---LSLAA 340
+ F V N I MY++ + +E+VF+++ R ++SWNA+I+G+ G SL
Sbjct: 134 SGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVL 193
Query: 341 VQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG--LDSDPIVGSAL 398
Q G + P+ +TF S L A GA +++ G + H+ +I G + I+ SA+
Sbjct: 194 FQRMQG--QGEVPDEFTFTSTLKACGALG--AIRGGTQIHASLITRGFPISIRNIIASAI 249
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+D+Y K G +FE+Q+VF+ ++K+ +W+A+I A+ G+ M+ F+++ D
Sbjct: 250 VDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDG 309
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC---MVDMLGRVGRLEEAEE 515
++ V ++ +G+ + +LK PS S ++DM + G EEAE
Sbjct: 310 FVLSIMMGVFADLALVEQGKQMHCYILK----VPSGLDISVANSIIDMYLKCGLTEEAER 365
Query: 516 LVGQI 520
L ++
Sbjct: 366 LFSEM 370
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 12/266 (4%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
L+ S L +G +H + F + + N LI MY + + + VFD + R
Sbjct: 10 LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERN 69
Query: 321 IISWNALISGYAQNG-----LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKH 375
++SW AL+ GY Q G L+L + GV KPN +TF + L A GA + ++
Sbjct: 70 VVSWTALMCGYLQEGNAKGSLALLCEMGYSGV----KPNEFTFSTSLKACGALGVV--EN 123
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G + H +K G + +VG+A +DMY K G I +++VFN+ ++ +W A+I+
Sbjct: 124 GMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTH 183
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML-KDYHIEPSP 494
G+ + F+ M+ +G PD TF S L CG G I G + S++ + + I
Sbjct: 184 EGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRN 243
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQI 520
S +VD+ + G L EA+++ +I
Sbjct: 244 IIASAIVDLYAKCGYLFEAQKVFDRI 269
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 211/634 (33%), Positives = 341/634 (53%), Gaps = 14/634 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+ +Y +G A +F+ L D + WN +L G+ KS D A+ M + ++
Sbjct: 187 IKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNS 246
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY+ LS C F G Q+H L++ G + + V N L+ MYS+ G L +AR++F+
Sbjct: 247 VTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNT 306
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D+V+WN +++GY Q+G + EA M+ G++ D V+F S + +L
Sbjct: 307 MPQTDTVTWNGLIAGYVQNG-FTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRH 365
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
K++H ++ V + + L+ Y K A K+F++ +V T MIS
Sbjct: 366 CKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVL 425
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+N DA++ F+ + +G+ PN +T ++ A + +K G+ +H +K + +
Sbjct: 426 HGLNI-DAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVN 484
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + + MYA+ + + + F +S + I WN++IS ++QNG AV F + S
Sbjct: 485 VGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVD-LFRQMGMS 543
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ AA +L +G+ H ++I+ SD V SAL+DMY K G + +
Sbjct: 544 GAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALA 603
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VFN K+E +W +II+A HG ++ F EM GV PD +TFL +++ CG
Sbjct: 604 RCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHA 663
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G H F M ++Y I +HY+CMVD+ GR GRL EA + + +P P V +
Sbjct: 664 GLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGT 723
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGACR+HGNVE+ + + L++++P SG YVL+SN++A+ G+W V +R+ MK KGV
Sbjct: 724 LLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGV 783
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+K G+SW DV G H FS+ + HP S EIY
Sbjct: 784 QKIPGYSWIDVN--GGTHMFSAAEGNHPESVEIY 815
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 272/570 (47%), Gaps = 21/570 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ +Y G+ +F L + + WN ++ G D AL F +M V D
Sbjct: 86 LGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDK 145
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + C + +H+ G +++VG+ALI +Y+ G + +ARRVFDE
Sbjct: 146 YTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDE 205
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P +D++ WN +L GY + GD+ A+ M ++ V++T S C L
Sbjct: 206 LPQRDTILWNVMLHGYVKSGDFN-NAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCL 264
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
G Q+HG+ I G+ V N L++ YSKC DA K+F M + ++W +I+
Sbjct: 265 GTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQ 324
Query: 236 ---REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++A LF M GV P+ VTF + +I ++ + +H ++ + +
Sbjct: 325 NGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYL 384
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
+ LI +Y + ++ + K+F + + ++ A+ISGY +GL++ A+ F +I+E
Sbjct: 385 KSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGM 444
Query: 353 -PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
PN+ T SVL A A +LK G+ H I+K L++ VGSA+ DMY K G + +
Sbjct: 445 VPNSLTMASVLPA--CAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLA 502
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
F E W ++IS+ +++G E ++ F++M G + DS++ S L+
Sbjct: 503 YEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANL 562
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
++ G+ + ++++ S D + S ++DM + G+L A + + G +S
Sbjct: 563 PALYYGKEMHGYVIRNAF---SSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVS-W 618
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAG 559
S++ A +GN D +M AG
Sbjct: 619 NSIIAA---YGNHGCARECLDLFHEMLRAG 645
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 219/445 (49%), Gaps = 10/445 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ I+ G+ + + ++ +Y GR+ + +F + +++ WN ++ G G
Sbjct: 65 QVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLG 124
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ A+L +M+ + D +F ACG N+ L +H + +G+ + VG
Sbjct: 125 WFDF-ALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVG 183
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVC 252
+ L+ Y+ DA +VF + R+ I W M+ S + +A+ F MR
Sbjct: 184 SALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSM 243
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
N VT+ ++ + G +HGL I + F +P V N L+ MY++ ++ D+ K+
Sbjct: 244 VNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKL 303
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
F+ + + ++WN LI+GY QNG + A F +I KP++ TF S L ++ E
Sbjct: 304 FNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSI--LESG 361
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SL+H + HS+I++ + D + SAL+D+Y K G + ++++F + TA+IS
Sbjct: 362 SLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMIS 421
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
HG +N F+ + +G+ P+S+T SVL C + G+ L +LK +E
Sbjct: 422 GYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKK-QLE 480
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEEL 516
+ S + DM + GRL+ A E
Sbjct: 481 NIVNVGSAITDMYAKCGRLDLAYEF 505
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 164/360 (45%), Gaps = 13/360 (3%)
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
AC ++ +Q+H I G ++ + ++ Y C D +F + N +
Sbjct: 53 ACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALP 112
Query: 228 WTTMIS----MNREDAVSLFK-EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
W MI + D LF +M V P+ TF +I A N V ++H
Sbjct: 113 WNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTAR 172
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
F + V + LI +YA + D+ +VFDEL R+ I WN ++ GY ++G A+
Sbjct: 173 SLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMG 232
Query: 343 AFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F G+ S N+ T+ +L+ L G + H +I G + DP V + L+ M
Sbjct: 233 TFCGMRTSYSMVNSVTYTCILSICATRGKFCL--GTQVHGLVIGSGFEFDPQVANTLVAM 290
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K G++F+++++FN + W +I+ ++G + F M + GV+PDS+TF
Sbjct: 291 YSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTF 350
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQ 519
S L +G + + + +++ H P D Y S ++D+ + G +E A ++ Q
Sbjct: 351 ASFLPSILESGSLRHCKEVHSYIVR--HRVPF-DVYLKSALIDIYFKGGDVEMARKIFQQ 407
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/626 (32%), Positives = 335/626 (53%), Gaps = 73/626 (11%)
Query: 79 LHSLIVKFGLDSE-VYVGNALITMYSRWGRLVEARRVFDEMPN----------------- 120
+H LI+K L + ++ N L+T Y++ GRL ARRVFDEMP+
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 121 --------------KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA 166
+D+VS+NA+++G++ G L + + +R ++ ++
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK-------------------- 206
+ LG +H +++G+G + VG+ L+ Y+K
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 207 -----------CEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDG 250
C++ DA +F+ M DR+ I+WTTM++ + +A+ +F+ MR +G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V + TF ++ A +EG+ IH +T + V + L+ MY++ S++ +E
Sbjct: 274 VGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAE 369
VF ++CR IISW A+I GY QN S AV+AF + + KP+ +T GSV+++ A
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISS--CAN 391
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL+ G + H + GL V +AL+ +YGK GSI ++ R+F+E + +WTA+
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 451
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
++ A+ G + ++ F++M G++PD +TF+ VL+ C R G++ KG FDSM KD+
Sbjct: 452 VTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHD 511
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I P DHY+CM+D+ R GR +EAEE + Q+P P +LL +CR+ GN+E+G+ A
Sbjct: 512 IVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAA 571
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
+ L++ +P SYVL+ +++A KG W VA LR+GM+ + V+KE G SW + + +H
Sbjct: 572 ENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSW--IKYKNKVH 629
Query: 610 GFSSGDNTHPRSEEIYRMAECLGSEM 635
FS+ D +HP S IY E L S+M
Sbjct: 630 IFSADDQSHPFSSRIYEKLEWLNSKM 655
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 167/649 (25%), Positives = 285/649 (43%), Gaps = 120/649 (18%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS-DDALSFALRMNLI---GVVFDAVTYSTALSFCLDHE 71
+F ++ D VS+N +++GF + A S L L+ V +T S +
Sbjct: 101 LFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160
Query: 72 GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP------------ 119
G +H +++ G + +VG+ L+ MY++ G + +ARRVF EM
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220
Query: 120 -------------------NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
++DS++W +++G TQ+G +EA+ M +G+ +D
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG-LQLEALDVFRRMRAEGVGIDQY 279
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+F S +ACG E GKQIH + Y +V VG+ L+ YSKC A VFRRM
Sbjct: 280 TFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 221 HDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
RN+ISWT MI + E+AV F EM++DG+ P+D T +I + + ++EG
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
H L + + + +V N L+T+Y + S++D+ ++FDE+S + +SW AL++GYAQ G
Sbjct: 400 QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFG 459
Query: 336 LSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
+ + F ++ KP+ TF VL+A A +++ G D
Sbjct: 460 KAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAG-------------LVEKGCD----- 501
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFA-----WTAIISALARHGDYESVMNQFKEM 449
F+ Q+ + +T +I +R G ++ K+M
Sbjct: 502 -------------------YFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQM 542
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVG 508
+ PD+ + ++L+ C G + G+ +++L+ +P +P Y + M G
Sbjct: 543 PHS---PDAFGWATLLSSCRLRGNMEIGKWAAENLLE---TDPQNPASYVLLCSMHAAKG 596
Query: 509 RLEEAEELV-----GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSY 563
+ E L Q+ PG S ++ ++H + A S+
Sbjct: 597 QWTEVAHLRRGMRDRQVKKEPGCSWIKY---KNKVH---------------IFSADDQSH 638
Query: 564 VLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFS 612
S +Y EK +W L M +G + +V DV D D +H S
Sbjct: 639 PFSSRIY-EKLEW-----LNSKMAEEGYKPDVSSVLHDVADADKVHMIS 681
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 20/248 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K A +F + +I+SW ++ G+ + S++A+ M + G+ D
Sbjct: 320 VDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDD 379
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + +S C + G Q H L + GL + V NAL+T+Y + G + +A R+FDE
Sbjct: 380 FTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDE 439
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D VSW A+++GY Q G E I +M+ GL+ D V+F SAC +E
Sbjct: 440 MSFHDQVSWTALVTGYAQFGK-AKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEK 498
Query: 178 G--------KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISW 228
G K V I Y ++ YS+ +A + ++M H + W
Sbjct: 499 GCDYFDSMQKDHDIVPIDDHY-------TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGW 551
Query: 229 TTMISMNR 236
T++S R
Sbjct: 552 ATLLSSCR 559
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 342/646 (52%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K D ALC F + + VSW ++G +++ L + M +G+
Sbjct: 233 VDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQ 292
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+Y++A C G QLH+ +K S+ VG A++ +Y++ L +ARR F
Sbjct: 293 PSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFG 352
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+PN + NA++ G + G G+EA+ M+R +R D VS + SAC K
Sbjct: 353 LPNHTVETSNAMMVGLVRAG-LGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQ 411
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+Q+H ++IK G+ + V N ++ Y KC+ +A +F+ M ++ +SW +I+
Sbjct: 412 GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 471
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +D + F EM G+ P+D T+ ++ A + ++ G M+H IK+ S+ V
Sbjct: 472 NGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFV 531
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ ++ MY + + +++K+ D + ++++SWNA++SG++ N S A Q FF + +
Sbjct: 532 ASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA-QKFFSEMLDMG 590
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+ +TF +VL+ I L G++ H IIK + D + S L+DMY K G + +
Sbjct: 591 LKPDHFTFATVLDTCANLATIEL--GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPD 648
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S VF + +++ +W A+I A HG + F+ M+ + V P+ TF++VL C
Sbjct: 649 SLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSH 708
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+ G F M Y +EP +H++CMVD+LGR +EA + + +P + +
Sbjct: 709 VGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWK 768
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL C+I +VE+ E A ++ ++P S Y+L+SN+YAE G W V+ R+ +K
Sbjct: 769 TLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGR 828
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++KE G SW +V +HGF GD HPRS E+Y M L EMK
Sbjct: 829 LKKEPGCSWIEVQ--SEMHGFLVGDKAHPRSGELYEMLNDLIGEMK 872
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 270/524 (51%), Gaps = 17/524 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ Y +G A+ +F+ + +PD+VSWN ++SG+ + +++ + M GV D
Sbjct: 132 LTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDR 191
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L C E G+Q+H+L VK GL+ +V G+AL+ MY + L +A F
Sbjct: 192 TTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYG 251
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ VSW A ++G Q+ Y V + IEM R GL + S+ SA +C L
Sbjct: 252 MPERNWVSWGAAIAGCVQNEQY-VRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 310
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV-ISWTTMISMNR 236
G+Q+H +IK + + VG ++ Y+K DA + F + + V S M+ + R
Sbjct: 311 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 370
Query: 237 E----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF+ M + + V+ G+ A + +G+ +H L IK+ F + V
Sbjct: 371 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 430
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N ++ +Y + +++ ++ +F + ++ +SWNA+I+ QNG + F +++
Sbjct: 431 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 490
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+ +T+GSVL A A SL++G H +IK GL SD V S ++DMY K G I E+
Sbjct: 491 KPDDFTYGSVLKACAALR--SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 548
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
Q++ + + +W AI+S + + + E F EM + G++PD TF +VL C
Sbjct: 549 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 608
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEA 513
I G+ + ++K ++ D Y S +VDM + G + ++
Sbjct: 609 ATIELGKQIHGQIIKQEMLD---DEYISSTLVDMYAKCGDMPDS 649
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 236/466 (50%), Gaps = 11/466 (2%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
N ++T YS G + A +FD MP+ D VSWNA++SGY Q G + E++ +EM R+G+
Sbjct: 129 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQ-ESVDLFVEMARRGV 187
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
D +F +C + L LG Q+H +++K G V G+ L+ Y KC DA
Sbjct: 188 SPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALC 247
Query: 216 VFRRMHDRNVISWTTMIS--MNREDAV---SLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
F M +RN +SW I+ + E V LF EM+ G+ + ++ + + +
Sbjct: 248 FFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 307
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+ GR +H IK F S+ V ++ +YA+ S+ D+ + F L + + NA++ G
Sbjct: 308 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 367
Query: 331 YAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
+ GL + A+ F +I+ S + + + V +A AE GQ+ H IK G D
Sbjct: 368 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSA--CAETKGYFQGQQVHCLAIKSGFD 425
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
D V +A+LD+YGK ++ E+ +F ++K +W AII+AL ++G Y+ + F EM
Sbjct: 426 VDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEM 485
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
G++PD T+ SVL C + G + D ++K + S +VDM + G
Sbjct: 486 LRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKCGI 544
Query: 510 LEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM 555
++EA++L +I GG + ++L ++ E ++ ++ M
Sbjct: 545 IDEAQKLHDRI-GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDM 589
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 142/336 (42%), Gaps = 53/336 (15%)
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--------------- 233
G+ V N L+ Y++C A +VF M R+ +SW TM++
Sbjct: 89 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 148
Query: 234 --MNREDAVS-------------------LFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
M D VS LF EM GV P+ TF L+ + S +
Sbjct: 149 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 208
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G +H L +KT + + L+ MY + S+ D+ F + R +SW A I+G
Sbjct: 209 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 268
Query: 333 QNGLSLAAVQAFFGV----IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
QN + ++ F + + S+P ++ S + A L G++ H+H IK
Sbjct: 269 QNEQYVRGLELFIEMQRLGLGVSQP---SYASAFRSCAAMS--CLNTGRQLHAHAIKNKF 323
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVF----NETQEKSEFAWTAIISALARHGDYESVMN 444
SD +VG+A++D+Y K S+ +++R F N T E S A++ L R G M
Sbjct: 324 SSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS----NAMMVGLVRAGLGIEAMG 379
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
F+ M +R D ++ V + C +G+ +
Sbjct: 380 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQV 415
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 39/274 (14%)
Query: 282 IKTNFLSEPSVCNCLITMYAR----------FESMQDSEKV------------------- 312
+ + F+ V NCL+ MYAR F++M + V
Sbjct: 86 VVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAV 145
Query: 313 --FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAE 369
FD + +++SWNAL+SGY Q G+ +V F + + P+ TF +L + A E
Sbjct: 146 ALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALE 205
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
++SL G + H+ +K GL+ D GSAL+DMYGK S+ ++ F E++ +W A
Sbjct: 206 ELSL--GVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAA 263
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I+ ++ Y + F EM+ G+ ++ S C ++ GR L +K+
Sbjct: 264 IAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKN-- 321
Query: 490 IEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
+ S D + +VD+ + L +A +P
Sbjct: 322 -KFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 354
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 342/646 (52%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K D ALC F + + VSW ++G +++ L + M +G+
Sbjct: 191 VDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQ 250
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+Y++A C G QLH+ +K S+ VG A++ +Y++ L +ARR F
Sbjct: 251 PSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFG 310
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+PN + NA++ G + G G+EA+ M+R +R D VS + SAC K
Sbjct: 311 LPNHTVETSNAMMVGLVRAG-LGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQ 369
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+Q+H ++IK G+ + V N ++ Y KC+ +A +F+ M ++ +SW +I+
Sbjct: 370 GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 429
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +D + F EM G+ P+D T+ ++ A + ++ G M+H IK+ S+ V
Sbjct: 430 NGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFV 489
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ ++ MY + + +++K+ D + ++++SWNA++SG++ N S A Q FF + +
Sbjct: 490 ASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA-QKFFSEMLDMG 548
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+ +TF +VL+ I L G++ H IIK + D + S L+DMY K G + +
Sbjct: 549 LKPDHFTFATVLDTCANLATIEL--GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPD 606
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S VF + +++ +W A+I A HG + F+ M+ + V P+ TF++VL C
Sbjct: 607 SLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSH 666
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+ G F M Y +EP +H++CMVD+LGR +EA + + +P + +
Sbjct: 667 VGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWK 726
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL C+I +VE+ E A ++ ++P S Y+L+SN+YAE G W V+ R+ +K
Sbjct: 727 TLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGR 786
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++KE G SW +V +HGF GD HPRS E+Y M L EMK
Sbjct: 787 LKKEPGCSWIEVQ--SEMHGFLVGDKAHPRSGELYEMLNDLIGEMK 830
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 270/524 (51%), Gaps = 17/524 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ Y +G A+ +F+ + +PD+VSWN ++SG+ + +++ + M GV D
Sbjct: 90 LTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDR 149
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L C E G+Q+H+L VK GL+ +V G+AL+ MY + L +A F
Sbjct: 150 TTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYG 209
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ VSW A ++G Q+ Y V + IEM R GL + S+ SA +C L
Sbjct: 210 MPERNWVSWGAAIAGCVQNEQY-VRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV-ISWTTMISMNR 236
G+Q+H +IK + + VG ++ Y+K DA + F + + V S M+ + R
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328
Query: 237 E----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF+ M + + V+ G+ A + +G+ +H L IK+ F + V
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N ++ +Y + +++ ++ +F + ++ +SWNA+I+ QNG + F +++
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+ +T+GSVL A A SL++G H +IK GL SD V S ++DMY K G I E+
Sbjct: 449 KPDDFTYGSVLKACAALR--SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 506
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
Q++ + + +W AI+S + + + E F EM + G++PD TF +VL C
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEA 513
I G+ + ++K ++ D Y S +VDM + G + ++
Sbjct: 567 ATIELGKQIHGQIIKQEMLD---DEYISSTLVDMYAKCGDMPDS 607
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 236/466 (50%), Gaps = 11/466 (2%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
N ++T YS G + A +FD MP+ D VSWNA++SGY Q G + E++ +EM R+G+
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQ-ESVDLFVEMARRGV 145
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
D +F +C + L LG Q+H +++K G V G+ L+ Y KC DA
Sbjct: 146 SPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALC 205
Query: 216 VFRRMHDRNVISWTTMIS--MNREDAV---SLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
F M +RN +SW I+ + E V LF EM+ G+ + ++ + + +
Sbjct: 206 FFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 265
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+ GR +H IK F S+ V ++ +YA+ S+ D+ + F L + + NA++ G
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325
Query: 331 YAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
+ GL + A+ F +I+ S + + + V +A AE GQ+ H IK G D
Sbjct: 326 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSA--CAETKGYFQGQQVHCLAIKSGFD 383
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
D V +A+LD+YGK ++ E+ +F ++K +W AII+AL ++G Y+ + F EM
Sbjct: 384 VDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEM 443
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
G++PD T+ SVL C + G + D ++K + S +VDM + G
Sbjct: 444 LRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKCGI 502
Query: 510 LEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM 555
++EA++L +I GG + ++L ++ E ++ ++ M
Sbjct: 503 IDEAQKLHDRI-GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDM 547
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 143/336 (42%), Gaps = 53/336 (15%)
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--------------- 233
G+ + V N L+ Y++C A +VF M R+ +SW TM++
Sbjct: 47 GFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106
Query: 234 --MNREDAVS-------------------LFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
M D VS LF EM GV P+ TF L+ + S +
Sbjct: 107 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 166
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G +H L +KT + + L+ MY + S+ D+ F + R +SW A I+G
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226
Query: 333 QNGLSLAAVQAFFGV----IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
QN + ++ F + + S+P ++ S + A L G++ H+H IK
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQP---SYASAFRSCAAMS--CLNTGRQLHAHAIKNKF 281
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVF----NETQEKSEFAWTAIISALARHGDYESVMN 444
SD +VG+A++D+Y K S+ +++R F N T E S A++ L R G M
Sbjct: 282 SSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS----NAMMVGLVRAGLGIEAMG 337
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
F+ M +R D ++ V + C +G+ +
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQV 373
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 39/274 (14%)
Query: 282 IKTNFLSEPSVCNCLITMYAR----------FESMQDSEKV------------------- 312
+ + F+ V NCL+ MYAR F++M + V
Sbjct: 44 VVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAV 103
Query: 313 --FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAE 369
FD + +++SWNAL+SGY Q G+ +V F + + P+ TF +L + A E
Sbjct: 104 ALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALE 163
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
++SL G + H+ +K GL+ D GSAL+DMYGK S+ ++ F E++ +W A
Sbjct: 164 ELSL--GVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAA 221
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I+ ++ Y + F EM+ G+ ++ S C ++ GR L +K+
Sbjct: 222 IAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKN-- 279
Query: 490 IEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
+ S D + +VD+ + L +A +P
Sbjct: 280 -KFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/633 (31%), Positives = 334/633 (52%), Gaps = 61/633 (9%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
TY + L C D + G ++HS+I ++ + +G+ L+ MY G L E RR+FD++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 119 PN-------------------------------------------------KDSVSWNAI 129
N +D +SWN++
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 130 LSGYTQDGDYGVEAILALIE-MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
+SGY +G E L L E M+ G+ D + S + C + L LG+ +HG +IK
Sbjct: 223 ISGYVSNG--LSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKA 280
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNRED----AVSLF 243
+G +++ N L+ YSK A +VF M +R+V+SWT+MI+ RE +V LF
Sbjct: 281 SFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLF 340
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
EM +G+ P+ T ++HA + L++ G+ +H + S+ V N L+ MYA+
Sbjct: 341 HEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKC 400
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLN 363
SM D+ VF E+ ++I+SWN +I GY++N L A+ F + SKPN+ T +L
Sbjct: 401 GSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILP 460
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
A A +L+ GQ H HI++ G D V +AL+DMY K G++ ++ +F+ EK
Sbjct: 461 A--CASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDL 518
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
+WT +I+ HG + F EM N G+ PD ++F+S+L C +G++ +G F+
Sbjct: 519 VSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNM 578
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
M + IEP +HY+C+VD+L R G L +A + + +P P ++ +LL CRI+ +V+
Sbjct: 579 MRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVK 638
Query: 544 MGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG 603
+ E++A+ + ++EP +G YVL++N+YAE WE V LR+ + +G+RK G SW ++
Sbjct: 639 LAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIK 698
Query: 604 DIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+H F +GD++HP + +I + + + MK
Sbjct: 699 --GKVHIFVTGDSSHPLANKIELLLKKTRTRMK 729
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 145/549 (26%), Positives = 254/549 (46%), Gaps = 70/549 (12%)
Query: 1 MNMYCKSGQFDKALCIF------------------NNLNNPDIVSWNTVLSGFEK---SD 39
MN Y K G F ++L +F + L + D++SWN+++SG+ S+
Sbjct: 174 MNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSE 233
Query: 40 DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALI 99
L +M L+G+ D T + ++ C + L G LH +K E+ + N L+
Sbjct: 234 KGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLL 293
Query: 100 TMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH 159
MYS+ G L A +VF+ M + VSW ++++GY ++G + L EM ++G+ D
Sbjct: 294 DMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRL-FHEMEKEGISPDI 352
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR 219
+ T+ AC LE GK +H + + + V N LM Y+KC GDA+ VF
Sbjct: 353 FTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSE 412
Query: 220 MHDRNVISWTTMI---SMNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
M ++++SW TMI S N +A++LF EM+ + PN +T ++ A + ++ G
Sbjct: 413 MQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSK-PNSITMACILPACASLAALERG 471
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
+ IHG ++ F + V N L+ MY + ++ + +FD + ++++SW +I+GY +
Sbjct: 472 QEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMH 531
Query: 335 GLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
G A+ AF + +P+ +F S+L A SH
Sbjct: 532 GYGSEAIAAFNEMRNSGIEPDEVSFISILYAC---------------SH----------- 565
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
S LLD + F R + KSE + I+ LAR G+ K M
Sbjct: 566 --SGLLD---EGWGFFNMMRNNCCIEPKSEH-YACIVDLLARAGNLSKAYKFIKMMP--- 616
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD-YHIEP-SPDHYSCMVDMLGRVGRLE 511
+ PD+ + ++L C I+ L + + + + +EP + +Y + ++ + E
Sbjct: 617 IEPDATIWGALLCGC----RIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWE 672
Query: 512 EAEELVGQI 520
E ++L +I
Sbjct: 673 EVKKLRERI 681
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 342/646 (52%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K D ALC F + + VSW ++G +++ L + M +G+
Sbjct: 191 VDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQ 250
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+Y++A C G QLH+ +K S+ VG A++ +Y++ L +ARR F
Sbjct: 251 PSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFG 310
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+PN + NA++ G + G G+EA+ M+R +R D VS + SAC K
Sbjct: 311 LPNHTVETSNAMMVGLVRAG-LGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQ 369
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+Q+H ++IK G+ + V N ++ Y KC+ +A +F+ M ++ +SW +I+
Sbjct: 370 GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 429
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +D + F EM G+ P+D T+ ++ A + ++ G M+H IK+ S+ V
Sbjct: 430 NGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFV 489
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ ++ MY + + +++K+ D + ++++SWNA++SG++ N S A Q FF + +
Sbjct: 490 ASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEA-QKFFSEMLDMG 548
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+ +TF +VL+ I L G++ H IIK + D + S L+DMY K G + +
Sbjct: 549 LKPDHFTFATVLDTCANLATIEL--GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPD 606
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S VF + +++ +W A+I A HG + F+ M+ + V P+ TF++VL C
Sbjct: 607 SLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSH 666
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+ G F M Y +EP +H++CMVD+LGR +EA + + +P + +
Sbjct: 667 VGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWK 726
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL C+I +VE+ E A ++ ++P S Y+L+SN+YAE G W V+ R+ +K
Sbjct: 727 TLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGR 786
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++KE G SW +V +HGF GD HPRS E+Y M L EMK
Sbjct: 787 LKKEPGCSWIEVQ--SEMHGFLVGDKAHPRSGELYEMLNDLIGEMK 830
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 270/524 (51%), Gaps = 17/524 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ Y +G A+ +F+ + +PD+VSWN ++SG+ + +++ + M GV D
Sbjct: 90 LTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDR 149
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L C E G+Q+H+L VK GL+ +V G+AL+ MY + L +A F
Sbjct: 150 TTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYG 209
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ VSW A ++G Q+ Y V + IEM R GL + S+ SA +C L
Sbjct: 210 MPERNWVSWGAAIAGCVQNEQY-VRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV-ISWTTMISMNR 236
G+Q+H +IK + + VG ++ Y+K DA + F + + V S M+ + R
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328
Query: 237 E----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF+ M + + V+ G+ A + +G+ +H L IK+ F + V
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N ++ +Y + +++ ++ +F + ++ +SWNA+I+ QNG + F +++
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+ +T+GSVL A A SL++G H +IK GL SD V S ++DMY K G I E+
Sbjct: 449 KPDDFTYGSVLKACAALR--SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 506
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
Q++ + + +W AI+S + + + E F EM + G++PD TF +VL C
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEA 513
I G+ + ++K ++ D Y S +VDM + G + ++
Sbjct: 567 ATIELGKQIHGQIIKQEMLD---DEYISSTLVDMYAKCGDMPDS 607
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 236/466 (50%), Gaps = 11/466 (2%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
N ++T YS G + A +FD MP+ D VSWNA++SGY Q G + E++ +EM R+G+
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQ-ESVDLFVEMARRGV 145
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
D +F +C + L LG Q+H +++K G V G+ L+ Y KC DA
Sbjct: 146 SPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALC 205
Query: 216 VFRRMHDRNVISWTTMIS--MNREDAV---SLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
F M +RN +SW I+ + E V LF EM+ G+ + ++ + + +
Sbjct: 206 FFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 265
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+ GR +H IK F S+ V ++ +YA+ S+ D+ + F L + + NA++ G
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325
Query: 331 YAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
+ GL + A+ F +I+ S + + + V +A AE GQ+ H IK G D
Sbjct: 326 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSA--CAETKGYFQGQQVHCLAIKSGFD 383
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
D V +A+LD+YGK ++ E+ +F ++K +W AII+AL ++G Y+ + F EM
Sbjct: 384 VDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEM 443
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
G++PD T+ SVL C + G + D ++K + S +VDM + G
Sbjct: 444 LRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKCGI 502
Query: 510 LEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM 555
++EA++L +I GG + ++L ++ E ++ ++ M
Sbjct: 503 IDEAQKLHDRI-GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDM 547
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 142/336 (42%), Gaps = 53/336 (15%)
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--------------- 233
G+ V N L+ Y++C A +VF M R+ +SW TM++
Sbjct: 47 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106
Query: 234 --MNREDAVS-------------------LFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
M D VS LF EM GV P+ TF L+ + S +
Sbjct: 107 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 166
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G +H L +KT + + L+ MY + S+ D+ F + R +SW A I+G
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226
Query: 333 QNGLSLAAVQAFFGV----IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
QN + ++ F + + S+P ++ S + A L G++ H+H IK
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQP---SYASAFRSCAAMS--CLNTGRQLHAHAIKNKF 281
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVF----NETQEKSEFAWTAIISALARHGDYESVMN 444
SD +VG+A++D+Y K S+ +++R F N T E S A++ L R G M
Sbjct: 282 SSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS----NAMMVGLVRAGLGIEAMG 337
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
F+ M +R D ++ V + C +G+ +
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQV 373
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 39/274 (14%)
Query: 282 IKTNFLSEPSVCNCLITMYAR----------FESMQDSEKV------------------- 312
+ + F+ V NCL+ MYAR F++M + V
Sbjct: 44 VVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAV 103
Query: 313 --FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAE 369
FD + +++SWNAL+SGY Q G+ +V F + + P+ TF +L + A E
Sbjct: 104 ALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALE 163
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
++SL G + H+ +K GL+ D GSAL+DMYGK S+ ++ F E++ +W A
Sbjct: 164 ELSL--GVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAA 221
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I+ ++ Y + F EM+ G+ ++ S C ++ GR L +K+
Sbjct: 222 IAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKN-- 279
Query: 490 IEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
+ S D + +VD+ + L +A +P
Sbjct: 280 -KFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 210/649 (32%), Positives = 358/649 (55%), Gaps = 31/649 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTY 60
Y K G A F+ + + SW ++L+ + ++ AL RM+L + V Y
Sbjct: 68 YGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMDLQP---NPVVY 124
Query: 61 STALSFCLDHEGFLFGLQLHSLIV-KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+T L C E G +HS I GL +V + N+L+TMY++ G L +A+R+F+ M
Sbjct: 125 TTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMS 184
Query: 120 NKDSVS-WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+ SVS WNA+++ Y Q G + E + L E M + +FTS SAC + L+ G
Sbjct: 185 GRRSVSSWNAMIAAYAQSGHF--EEAIRLYEDM--DVEPSVRTFTSVLSACSNLGLLDQG 240
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
++IH + G +S+ N L++ Y++C+ DA K+F+R+ R+V+SW+ MI+ E
Sbjct: 241 RKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAET 300
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ + +M+L+GV PN TF ++ A S+G+L + GR +H + +
Sbjct: 301 DLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDL-RAGRAVHDQILGNGYKITLVN 359
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
L+ +Y + S+ ++ +FD++ R+ W LI GY++ G ++ + + +K
Sbjct: 360 GTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTK 419
Query: 353 PNAYT--FGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
A + V++A +GA D ++ HS I G+ SD ++ ++L++MY + G+
Sbjct: 420 VPATKIIYSCVISACASLGAFAD-----ARQAHSDIEADGMISDFVLATSLVNMYSRWGN 474
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +++VF++ + AWT +I+ A+HG++ + +KEME +G P +TF+ VL
Sbjct: 475 LESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYA 534
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G+ +G+ LF S+ DY + P+ HYSC++D+L R GRL +AEEL+ +P P
Sbjct: 535 CSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDV 594
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
SLLGA RIH +V+ A + K++P SYVL+SN++A G+ +A +R M
Sbjct: 595 TWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMV 654
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++GV+K G SW +V D +H F+ GDN+HPR +EI+ + L ++K
Sbjct: 655 ARGVKKRRGSSWIEVA--DQIHEFNVGDNSHPRFQEIFAELQRLSPKIK 701
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 271/547 (49%), Gaps = 44/547 (8%)
Query: 44 FALRMNLIGVVFDAV-TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMY 102
F L+ G FD+ Y AL C D E Q+H I + V++GN ++ Y
Sbjct: 13 FQLKEEKAGSRFDSSGHYRDALRQCQDLESVR---QIHDRI-SGAASANVFLGNEIVRAY 68
Query: 103 SRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSF 162
+ G + AR FD + K+ SW ++L+ Y Q+G Y A L L + M L+ + V +
Sbjct: 69 GKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHY--RAALDLYKRM--DLQPNPVVY 124
Query: 163 TSAASACGHEKNLELGKQIHG-VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
T+ AC + LE GK IH +S G V + N L++ Y+KC DA ++F RM
Sbjct: 125 TTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMS 184
Query: 222 -DRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
R+V SW MI S + E+A+ L+++M ++ P+ TF ++ A S L+ +GR
Sbjct: 185 GRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGR 241
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
IH L + S+ N L+TMYAR + + D+ K+F L R+++SW+A+I+ +A+
Sbjct: 242 KIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETD 301
Query: 336 LSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
L A++ + + E +PN YTF SVL A + D L+ G+ H I+ G +
Sbjct: 302 LFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGD--LRAGRAVHDQILGNGYKITLVN 359
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
G+AL+D+Y GS+ E++ +F++ + + E WT +I ++ G V+ ++EM+N
Sbjct: 360 GTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTK 419
Query: 455 RPDS-ITFLSVLTVCGRNGMIHKGRHLF-----DSMLKDYHIEPSPDHYSCMVDMLGRVG 508
P + I + V++ C G R D M+ D+ + S +V+M R G
Sbjct: 420 VPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATS------LVNMYSRWG 473
Query: 509 RLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGER-IADAL---MKMEPAGSGSYV 564
LE A ++ + +S +L I G + GE +A L M++E A
Sbjct: 474 NLESARQVFDK------MSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELT 527
Query: 565 LMSNLYA 571
M LYA
Sbjct: 528 FMVVLYA 534
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 175/341 (51%), Gaps = 16/341 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY + D A IF L D+VSW+ +++ F ++ D+A+ F +M L GV +
Sbjct: 263 LTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNY 322
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ L C G +H I+ G + G AL+ +Y+ +G L EAR +FD+
Sbjct: 323 YTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQ 382
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLD--HVSFTSAASACGHEKNL 175
+ N+D W ++ GY++ G +L L M+ ++ + ++ SAC
Sbjct: 383 IENRDEGLWTVLIGGYSKQGHR--TGVLELYREMKNTTKVPATKIIYSCVISACASLGAF 440
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+Q H G + + L++ YS+ A +VF +M R+ ++WTT+I+
Sbjct: 441 ADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGY 500
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A+ L+KEM L+G P+++TF+ +++A S L ++G+ + + I++++ P
Sbjct: 501 AKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLF-ISIQSDYAMHP 559
Query: 291 SVCN--CLITMYARFESMQDSEKVFDELSCR-EIISWNALI 328
++ + C+I + +R + D+E++ + + ++W++L+
Sbjct: 560 NIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL 600
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 203/648 (31%), Positives = 350/648 (54%), Gaps = 16/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+N+Y K + D A +F+ + + ++W +++ G+ + +D A S A M+ G F+
Sbjct: 109 LNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNE 168
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C + + G Q+H ++K G D V+VG +LI MY++ G A +VFD
Sbjct: 169 HTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDS 228
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD N ++ Y + G+ G +AI ++ G +FT+ S C + +E
Sbjct: 229 MGFKDIRCLNFMILEYGRAGN-GGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEE 287
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR 236
GKQ+ G++ K G+ + SVGN +++ Y + +A ++F M ++N+ISWT +IS +R
Sbjct: 288 GKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSR 347
Query: 237 ----EDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ AV F + + G+ + ++ S N ++ G IHG +K + +
Sbjct: 348 SGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVN 407
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+ +YA+ E +Q + VFD LS + I S+NA+++G+ ++ F ++ +
Sbjct: 408 VATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLA 467
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+ TF +L+ + A SL+ G+ H++ +K G D++ V ++++ MY K GSI
Sbjct: 468 GVKPDMVTFSRLLSLL--ANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIE 525
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ ++FN + +W A+ISA A HG + + F+EM+ KG PD T L++L C
Sbjct: 526 DAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACT 585
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+G+ G LF+ M Y I+P +HY+CM D+LGR G L EA +++ + P +
Sbjct: 586 YSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLW 645
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++L+ C++HGN+ G+ + L+ + P +GSY+L+SN+YA + + A +RK M
Sbjct: 646 RTLVNVCKLHGNLNFGKLASKHLLDLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMNDL 705
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKY 637
RKE G SW ++ + +H F + D HP S EIY E L EMK+
Sbjct: 706 KFRKEAGSSWIEID--NKVHHFVASDKDHPESREIYTRLELLTDEMKW 751
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 175/631 (27%), Positives = 307/631 (48%), Gaps = 50/631 (7%)
Query: 18 NNLNNP--DIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLF 75
NNL NP ++ ++T+ ++D L F LI + + FL
Sbjct: 44 NNLQNPKPNVTRYSTI-----SNEDTLLFNDWPELIKI-------------SIGSRDFLL 85
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G +HS +VK G + + GN ++ +Y ++ RL A++VFD M +++++W +++ GY +
Sbjct: 86 GQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLE 145
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
D D+ +A +M + G + + T AC + LG+QIH IK G+ +V
Sbjct: 146 DNDFQSAFSIA-GDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVF 204
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDG 250
VG L++ Y+K A KVF M +++ MI + N A+ +FK + DG
Sbjct: 205 VGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDG 264
Query: 251 VCPNDVTFIGLIHAISIGNL-VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
P D TF +I + G+L V+EG+ + GL K FLSE SV N +ITMY +++
Sbjct: 265 FEPTDYTFTNIISTCN-GDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEA 323
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPN--AYTFGSVLNAVGA 367
E++F +S + +ISW ALISGY+++G AV AF G+ E N + ++L+
Sbjct: 324 ERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSD 383
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
++ L G + H ++K+G D V +AL+D+Y K + ++ VF+ K ++
Sbjct: 384 CNNLEL--GLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFN 441
Query: 428 AIISA-LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
AI++ L GD E M F ++ GV+PD +TF +L++ + KGR +K
Sbjct: 442 AILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVK 501
Query: 487 ---DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
D +I + + ++ M + G +E+A ++ + +S +L+ A +HG +
Sbjct: 502 TGFDTNISVA----NSVISMYAKCGSIEDAHQMFNIMNCRDSIS-WNALISAYALHGQAQ 556
Query: 544 MGERIADALMKMEPAGSGSYVLMSNLYA--EKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
+ + MK + + +++ L A G W+ L M+ K K + +A
Sbjct: 557 KSLFLFEE-MKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYAC 615
Query: 602 VGDIDGLHGFSS------GDNTHPRSEEIYR 626
+ D+ G G+ S + P+S ++R
Sbjct: 616 MADLLGRAGYLSEAMDIIKRSPFPKSTLLWR 646
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 215/663 (32%), Positives = 362/663 (54%), Gaps = 29/663 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN-PDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
+ +Y + G A +F+ + DIVSW + S ++ ++L M G++ +
Sbjct: 91 LTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGLLPN 150
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIV-KFGL-DSEVYVGNALITMYSRWGRLVEARRV 114
A T C HE + + +V K GL +++ VG+ALI M +R G L AR+V
Sbjct: 151 AYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDLASARKV 210
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD + K V W ++S Y Q G+ EA+ ++ + G D + +S SAC +
Sbjct: 211 FDGLIEKTVVVWTLLISRYVQ-GECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGS 269
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD---ANKVFRRMHDRNVISWTTM 231
+ LG Q+H ++++MG+ + V L+ Y+K + ANKVF RM +VISWT +
Sbjct: 270 VRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTAL 329
Query: 232 IS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
IS + + LF EM + + PN +T+ ++ A + + GR +H IK+N
Sbjct: 330 ISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSN 389
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ +V N L++MYA M+++ +VF++L R +IS I+ L +
Sbjct: 390 QAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIS---CITEGRDAPLDHRIGRMDM 446
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
G+ ++ TF S+++A AA L GQ+ H+ +K G SD V ++L+ MY +
Sbjct: 447 GI------SSSTFASLISA--AASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRC 498
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++ R FNE ++++ +WT++IS LA+HG E ++ F +M GV+P+ +T+++VL
Sbjct: 499 GYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVL 558
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ +G+ F SM +D+ + P +HY+CMVD+L R G ++EA E + ++P
Sbjct: 559 SACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKAD 618
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
V ++LLGACR H N+E+GE A ++++EP YVL+SNLYA+ G W+ VA +R
Sbjct: 619 ALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSA 678
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
M+ + KE G SW +V + H F +GD +HPR+++IY + L E+K + + +
Sbjct: 679 MRDNNLNKETGLSWMEVENTT--HEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTS 736
Query: 646 IAL 648
I L
Sbjct: 737 IVL 739
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 148/458 (32%), Positives = 236/458 (51%), Gaps = 38/458 (8%)
Query: 75 FGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFDEMPN-KDSVSWNAILSG 132
G LH +++ L D + V N+L+T+YSR G + AR VFD M +D VSW A+ S
Sbjct: 66 LGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASC 125
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC-GHEKNLELGKQIHGVSIKMG-Y 190
++G E++L + EM+ GL + + + A AC HE +G + G+ KMG +
Sbjct: 126 LARNGAER-ESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLW 184
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKE 245
GT ++VG+ L+ ++ A KVF + ++ V+ WT +IS E+AV +F +
Sbjct: 185 GTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLD 244
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF-- 303
DG P+ T +I A + V+ G +H L ++ F S+ V L+ MYA+
Sbjct: 245 FLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNI 304
Query: 304 -ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKES-KPNAYTFGS 360
++M + KVF+ + ++ISW ALISGY Q+G+ V FG ++ ES KPN T+ S
Sbjct: 305 EQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSS 364
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
+L A D G++ H+H+IK + VG+AL+ MY + G + E++RVFN+ E
Sbjct: 365 ILKACANISD--HDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYE 422
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+S +IS + D + ++ + G+ S TF S+++ GM+ KG+ L
Sbjct: 423 RS------MISCITEGRD--APLDHRIGRMDMGI--SSSTFASLISAAASVGMLTKGQQL 472
Query: 481 FDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEA 513
LK D + S +V M R G LE+A
Sbjct: 473 HAMTLKAGFGSDRFVSNS------LVSMYSRCGYLEDA 504
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 224/673 (33%), Positives = 360/673 (53%), Gaps = 44/673 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLI----GV 53
+NMY K G A +F+ + D VSWN+++S FE+ + A+ A R+ L+
Sbjct: 54 VNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIK-AFRLMLMEGFEPS 112
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
F V+ + A S +G G Q+H + G + NAL+ MY++ GRL +A+
Sbjct: 113 SFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKS 171
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
+ ++D V+WN+++S ++Q+ + +EA++ L M+ +G++ D V+F S AC H
Sbjct: 172 LLVLFEDRDLVTWNSMISSFSQNERF-MEALMFLRLMVLEGVKPDGVTFASVLPACSHLD 230
Query: 174 NLELGKQIHGVSIKMGYGTHVS-VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
L GK+IH +++ S VG+ L+ Y C VF + DR + W MI
Sbjct: 231 LLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMI 290
Query: 233 -----SMNREDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
S + E A+ LF EM G+ N T ++ A + IHG IK
Sbjct: 291 AGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGL 350
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ + N LI MY+R ++ S+++FD + R+I+SWN +I+ Y G S A+
Sbjct: 351 ETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHE 410
Query: 347 V--IKES---------------KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
+ I+E KPN+ T +VL G A +L G+ H++ I+ L
Sbjct: 411 MQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLP--GCASLSALAKGKEIHAYAIRNLLA 468
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
S VGSAL+DMY K G + ++RVF++ ++ W II A HG + + F++M
Sbjct: 469 SQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDM 528
Query: 450 ENKG-----VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDML 504
+G V+P +TF+++ C +GM+ +G LF M ++ IEP+PDHY+C+VD++
Sbjct: 529 VAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLV 588
Query: 505 GRVGRLEEAEELVGQIPGG-PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSY 563
GR G++EEA LV +P G + SLLGACRI+ N+E+GE A+ L++++P + Y
Sbjct: 589 GRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHY 648
Query: 564 VLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEE 623
VL+SN+Y+ G W+ LR+ MK+ GV+KE G SW + G D +H F +GD +HP+SE+
Sbjct: 649 VLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYG--DEVHKFLAGDLSHPQSEK 706
Query: 624 IYRMAECLGSEMK 636
++ E L +K
Sbjct: 707 LHDFLETLSERLK 719
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 249/499 (49%), Gaps = 34/499 (6%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDS--EVYVGNALITMYSRWGRLV 109
G D + L + G Q+H+ + KFG S V + N L+ MY + G L
Sbjct: 5 GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
+A +VFD + +D VSWN+I+S + ++ V AI A M+ +G + S A AC
Sbjct: 65 DAYKVFDRITERDQVSWNSIISALCRFEEWEV-AIKAFRLMLMEGFEPSSFTLVSMALAC 123
Query: 170 GHEKN---LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
+ + L LGKQIHG + G+ S N LM+ Y+K DA + DR+++
Sbjct: 124 SNLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDRDLV 182
Query: 227 SWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+W +MIS + +A+ + M L+GV P+ VTF ++ A S +L++ G+ IH
Sbjct: 183 TWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYA 242
Query: 282 IKTNFLSEPS-VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
++T+ + E S V + L+ MY ++ VFD + R+I WNA+I+GYAQ+ A
Sbjct: 243 LRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKA 302
Query: 341 VQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
+ F + + NA T S++ A E IS K G H ++IK GL+++ + +AL
Sbjct: 303 LMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEG--IHGYVIKRGLETNRYLQNAL 360
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA---RHGDYESVMNQFKEMENKGV- 454
+DMY + G I S+R+F+ +++ +W II++ R D ++++ + +E K
Sbjct: 361 IDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTY 420
Query: 455 ------------RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
+P+SIT ++VL C + KG+ + +++ + S +VD
Sbjct: 421 DGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNL-LASQVTVGSALVD 479
Query: 503 MLGRVGRLEEAEELVGQIP 521
M + G L A + Q+P
Sbjct: 480 MYAKCGCLNLARRVFDQMP 498
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 193/382 (50%), Gaps = 21/382 (5%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG--THVSVGNVLMSTYSKC 207
M+ G D+ +F + A + L LGKQIH K GYG + V++ N L++ Y KC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLI 262
GDA KVF R+ +R+ +SW ++IS E A+ F+ M ++G P+ T + +
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSM- 119
Query: 263 HAISIGNLVKE-----GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
A++ NL K G+ IHG C + S N L+ MYA+ + D++ +
Sbjct: 120 -ALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSN-NALMAMYAKLGRLDDAKSLLVLFE 177
Query: 318 CREIISWNALISGYAQNGLSLAAVQAF-FGVIKESKPNAYTFGSVLNAVGAAEDISLKHG 376
R++++WN++IS ++QN + A+ V++ KP+ TF SVL A + L+ G
Sbjct: 178 DRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLD--LLRTG 235
Query: 377 QRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
+ H++ ++ + + VGSAL+DMY G + + VF+ ++ W A+I+ A+
Sbjct: 236 KEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQ 295
Query: 436 HGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
E + F EME G+ ++ T S++ R I + + ++K +E +
Sbjct: 296 SEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKR-GLETNR 354
Query: 495 DHYSCMVDMLGRVGRLEEAEEL 516
+ ++DM R+G ++ ++ +
Sbjct: 355 YLQNALIDMYSRMGDIKTSKRI 376
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 205/587 (34%), Positives = 327/587 (55%), Gaps = 16/587 (2%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+++ L C G +H+ + G+DSE AL MY++ R +ARRVFD M
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 119 PNKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
P +D V+WNA+++GY ++G +E ++ + E +G R D ++ S AC + + L
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQE--EEGERPDSITLVSVLPACANARALA 178
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
++ H +I+ G V+V ++ Y KC A VF M +N +SW MI
Sbjct: 179 ACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYA 238
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + +A++LF M +GV DV+ + + A + EG +H L ++ S S
Sbjct: 239 QNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVS 298
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
V N LITMY++ + + + VFDEL R +SWNA+I G AQNG S AV+ F + ++
Sbjct: 299 VMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN 358
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQR-CHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+++T SV+ A+ DIS R H + I++ LD D V +AL+DMY K G +
Sbjct: 359 VKPDSFTLVSVIPALA---DISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVN 415
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ +FN +E+ W A+I HG ++ + F+EM++ G+ P+ TFLSVL+ C
Sbjct: 416 IARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACS 475
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +GR F SM +DY +EP +HY MVD+LGR G+L+EA + ++P PGLSV
Sbjct: 476 HAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVY 535
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LGAC++H NVE+ E A + ++ P +VL++N+YA W+ VA +R M+
Sbjct: 536 GAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKN 595
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G++K G W+ + + +H F SG H +++EIY L E+K
Sbjct: 596 GLQKTPG--WSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIK 640
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 203/381 (53%), Gaps = 19/381 (4%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMN-LIGVVFDA 57
NMY K + A +F+ + D V+WN +++G+ + + A+ +RM G D+
Sbjct: 102 NMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T + L C + + H+ ++ GL+ V V A++ Y + G + AR VFD
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDW 221
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP K+SVSWNA++ GY Q+GD EA+ M+ +G+ + VS +A ACG L+
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGD-SREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
G ++H + +++G ++VSV N L++ YSKC+ A+ VF + R +SW MI +
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ 340
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N EDAV LF M+L+ V P+ T + +I A++ + + R IHG I+ + + V
Sbjct: 341 NGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYV 400
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGV 347
LI MYA+ + + +F+ R +I+WNA+I GY +G AAV+ F G+
Sbjct: 401 LTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGI 460
Query: 348 IKESKPNAYTFGSVLNAVGAA 368
+ PN TF SVL+A A
Sbjct: 461 V----PNETTFLSVLSACSHA 477
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 146/283 (51%), Gaps = 9/283 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++ YCK G A +F+ + + VSWN ++ G+ ++ D AL+ RM GV
Sbjct: 203 LDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTD 262
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V+ AL C + G+++H L+V+ GLDS V V NALITMYS+ R+ A VFDE
Sbjct: 263 VSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDE 322
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ + VSWNA++ G Q+G +A+ M + ++ D + S A +
Sbjct: 323 LDRRTQVSWNAMILGCAQNG-CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQ 381
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
+ IHG SI++ V V L+ Y+KC A +F +R+VI+W MI
Sbjct: 382 ARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGS 441
Query: 236 ---REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
+ AV LF+EM+ G+ PN+ TF+ ++ A S LV EGR
Sbjct: 442 HGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGR 484
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY K + D A +F+ L+ VSWN ++ G + S+DA+ RM L V D+
Sbjct: 304 ITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDS 363
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + + D L +H ++ LD +VYV ALI MY++ GR+ AR +F+
Sbjct: 364 FTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS 423
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++WNA++ GY G +G A+ EM G+ + +F S SAC H ++
Sbjct: 424 ARERHVITWNAMIHGYGSHG-FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDE 482
Query: 178 GKQIHGVSIKMGYG 191
G++ + S+K YG
Sbjct: 483 GRE-YFTSMKEDYG 495
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 206/587 (35%), Positives = 327/587 (55%), Gaps = 16/587 (2%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+++ L C G +H+ + G+DSE AL MY++ R +ARRVFD M
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 119 PNKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
P +D V+WNA+++GY ++G +E ++ + E +G R D ++ S AC + + L
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQE--EEGERPDSITLVSVLPACANARALA 178
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
++ H +I+ G V+V ++ Y KC A VF M +N +SW MI
Sbjct: 179 ACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYA 238
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + +A++LF M +GV DV+ + + A + EG +H L ++ S S
Sbjct: 239 QNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVS 298
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LITMY++ + + + VFDEL R +SWNA+I G AQNG S AV+ F + E+
Sbjct: 299 VMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN 358
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQR-CHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+++T SV+ A+ DIS R H + I++ LD D V +AL+DMY K G +
Sbjct: 359 VKPDSFTLVSVIPALA---DISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVN 415
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ +FN +E+ W A+I HG ++ + F+EM++ G+ P+ TFLSVL+ C
Sbjct: 416 IARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACS 475
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +GR F SM +DY +EP +HY MVD+LGR G+L+EA + ++P PGLSV
Sbjct: 476 HAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVY 535
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LGAC++H NVE+ E A + ++ P +VL++N+YA W+ VA +R M+
Sbjct: 536 GAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKN 595
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G++K G W+ + + +H F SG H +++EIY L E+K
Sbjct: 596 GLQKTPG--WSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIK 640
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 203/381 (53%), Gaps = 19/381 (4%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMN-LIGVVFDA 57
NMY K + A +F+ + D V+WN +++G+ + + A+ +RM G D+
Sbjct: 102 NMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T + L C + + H+ ++ GL+ V V A++ Y + G + AR VFD
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDW 221
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP K+SVSWNA++ GY Q+GD EA+ M+ +G+ + VS +A ACG L+
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGD-SREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
G ++H + +++G ++VSV N L++ YSKC+ A+ VF + R +SW MI +
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ 340
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N EDAV LF M+L+ V P+ T + +I A++ + + R IHG I+ + + V
Sbjct: 341 NGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYV 400
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGV 347
LI MYA+ + + +F+ R +I+WNA+I GY +G AAV+ F G+
Sbjct: 401 LTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGI 460
Query: 348 IKESKPNAYTFGSVLNAVGAA 368
+ PN TF SVL+A A
Sbjct: 461 V----PNETTFLSVLSACSHA 477
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 146/283 (51%), Gaps = 9/283 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++ YCK G A +F+ + + VSWN ++ G+ ++ D AL+ RM GV
Sbjct: 203 LDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTD 262
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V+ AL C + G+++H L+V+ GLDS V V NALITMYS+ R+ A VFDE
Sbjct: 263 VSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDE 322
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ + VSWNA++ G Q+G +A+ M + ++ D + S A +
Sbjct: 323 LDRRTQVSWNAMILGCAQNG-CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQ 381
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
+ IHG SI++ V V L+ Y+KC A +F +R+VI+W MI
Sbjct: 382 ARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGS 441
Query: 236 ---REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
+ AV LF+EM+ G+ PN+ TF+ ++ A S LV EGR
Sbjct: 442 HGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGR 484
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY K + D A +F+ L+ VSWN ++ G + S+DA+ RM L V D+
Sbjct: 304 ITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDS 363
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + + D L +H ++ LD +VYV ALI MY++ GR+ AR +F+
Sbjct: 364 FTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS 423
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++WNA++ GY G +G A+ EM G+ + +F S SAC H ++
Sbjct: 424 ARERHVITWNAMIHGYGSHG-FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDE 482
Query: 178 GKQIHGVSIKMGYG 191
G++ + S+K YG
Sbjct: 483 GRE-YFTSMKEDYG 495
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 207/648 (31%), Positives = 356/648 (54%), Gaps = 30/648 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTY 60
Y K G A F+ + + SW ++L+ + ++ AL RM+L + V Y
Sbjct: 68 YGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMDLQP---NPVVY 124
Query: 61 STALSFCLDHEGFLFGLQLHSLIV-KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+T L C + G +HS I GL +V + N+L+TMY++ G L +A+R+F+ M
Sbjct: 125 TTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMS 184
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ SWNA+++ Y Q G + E + L E M + +FTS SAC + L+ G+
Sbjct: 185 GRSVSSWNAMIAAYAQSGHF--EEAIRLYEDM--DVEPSVRTFTSVLSACSNLGLLDQGR 240
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
+IH + G +S+ N L++ Y++C+ DA K+F+R+ R+V+SW+ MI+ E
Sbjct: 241 KIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETD 300
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+A+ + +M+L+GV PN TF ++ A S+G+L + GR +H + +
Sbjct: 301 LFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDL-RAGRAVHDQILGNGYKITLVNG 359
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
L+ +Y + S+ ++ +FD++ R+ W LI GY++ G ++ + + +K
Sbjct: 360 TALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKV 419
Query: 354 NAYT--FGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
A + V++A +GA D ++ HS I G+ SD ++ ++L++MY + G++
Sbjct: 420 PATKIIYSCVISACASLGAFAD-----ARQAHSDIEADGMISDFVLATSLVNMYSRWGNL 474
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+++VF++ + AWT +I+ A+HG++ + +KEME +G P +TF+ VL C
Sbjct: 475 ESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYAC 534
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G+ +G+ LF S+ DY + P+ HYSC++D+L R GRL +AEEL+ +P P
Sbjct: 535 SHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVT 594
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
SLLGA RIH +V+ A + K++P SYVL+SN++A G+ +A +R M +
Sbjct: 595 WSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVA 654
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+GV+K G SW +V D +H F+ GDN+HPR +EI+ + L ++K
Sbjct: 655 RGVKKRRGSSWIEVA--DQIHEFNVGDNSHPRFQEIFAELQRLSPKIK 700
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 271/546 (49%), Gaps = 43/546 (7%)
Query: 44 FALRMNLIGVVFDAV-TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMY 102
F L+ G FD+ Y AL C D E Q+H I + V++GN ++ Y
Sbjct: 13 FQLKEEKAGSRFDSSGHYRDALRQCQDLESVR---QIHDRI-SGAASANVFLGNEIVRAY 68
Query: 103 SRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSF 162
+ G + AR FD + K+ SW ++L+ Y Q+G Y A L L + M L+ + V +
Sbjct: 69 GKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHY--RAALDLYKRM--DLQPNPVVY 124
Query: 163 TSAASACGHEKNLELGKQIHG-VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
T+ AC K LE GK IH +S G V + N L++ Y+KC DA ++F RM
Sbjct: 125 TTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMS 184
Query: 222 DRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
R+V SW MI S + E+A+ L+++M ++ P+ TF ++ A S L+ +GR
Sbjct: 185 GRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGRK 241
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
IH L + S+ N L+TMYAR + + D+ K+F L R+++SW+A+I+ +A+ L
Sbjct: 242 IHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDL 301
Query: 337 SLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A++ + + E +PN YTF SVL A + D L+ G+ H I+ G + G
Sbjct: 302 FDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGD--LRAGRAVHDQILGNGYKITLVNG 359
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+AL+D+Y GS+ E++ +F++ + + E WT +I ++ G V+ ++EM+N
Sbjct: 360 TALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKV 419
Query: 456 PDS-ITFLSVLTVCGRNGMIHKGRHLF-----DSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
P + I + V++ C G R D M+ D+ + S +V+M R G
Sbjct: 420 PATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATS------LVNMYSRWGN 473
Query: 510 LEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGER-IADAL---MKMEPAGSGSYVL 565
LE A ++ + +S +L I G + GE +A L M++E A
Sbjct: 474 LESARQVFDK------MSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTF 527
Query: 566 MSNLYA 571
M LYA
Sbjct: 528 MVVLYA 533
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/508 (24%), Positives = 245/508 (48%), Gaps = 46/508 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY K G + A +F ++ + SWN +++ + +S ++A+ M++ V
Sbjct: 164 LTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSV--- 220
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ LS C + G ++H+LI G + ++ + NAL+TMY+R L +A ++F
Sbjct: 221 RTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQR 280
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P +D VSW+A+++ + + D EAI +M +G+R ++ +F S AC +L
Sbjct: 281 LPRRDVVSWSAMIAAFAET-DLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRA 339
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+ +H + GY + G L+ Y+ +A +F ++ +R+ WT +I
Sbjct: 340 GRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSK 399
Query: 233 SMNREDAVSLFKEMRLDGVCP-NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+R + L++EM+ P + + +I A + + R H +S+
Sbjct: 400 QGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFV 459
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE- 350
+ L+ MY+R+ +++ + +VFD++S R+ ++W LI+GYA++G A+ G+ KE
Sbjct: 460 LATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLAL----GLYKEM 515
Query: 351 ----SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD----PIVG--SALLD 400
++P+ TF VL A A G + + + + SD P + S ++D
Sbjct: 516 ELEGAEPSELTFMVVLYACSHA-------GLQEQGKQLFISIQSDYAMHPNIAHYSCIID 568
Query: 401 MYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMEN-KGVRPDS 458
+ + G + +++ + N E ++ W++++ A H D + + ++ V P S
Sbjct: 569 LLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPAS 628
Query: 459 ITFLS-VLTVCG--------RNGMIHKG 477
LS V V G RN M+ +G
Sbjct: 629 YVLLSNVHAVTGNLAGMASVRNTMVARG 656
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 198/646 (30%), Positives = 348/646 (53%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K + +L +F+ L + + +SW+ ++G ++D L M G+
Sbjct: 199 VDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQ 258
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY++ C G QLH +K S+V VG A + MY++ + +A ++F
Sbjct: 259 STYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSL 318
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P+ + S+NA++ GY ++ + G +A +++ + D VS + A SA K
Sbjct: 319 LPDHNLQSYNAMIIGYARN-EQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSE 377
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G Q+HG++IK +++ V N ++ Y KC +A+ +F M R+ +SW +I+ +
Sbjct: 378 GLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQ 437
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +S F M + P++ T+ ++ A + G +HG IK+ + V
Sbjct: 438 NESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFV 497
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-- 350
+ L+ MY++ M+++EK+ L + ++SWNA+ISG++ S + Q FF + E
Sbjct: 498 GSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDS-QRFFSHMLEMG 556
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ +T+ +VL+ + L G++ H+ +IK+ L SD + S L+DMY K G++ +
Sbjct: 557 VEPDNFTYATVLDTCANLATVGL--GKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHD 614
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S +F + ++ W A+I A HG E + F+ M ++ ++P+ TF+SVL C
Sbjct: 615 SLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSH 674
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G KG F M Y +EP +HYSCMVD+LGR G++EEA L+ +P + +
Sbjct: 675 VGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWR 734
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL C+I GNVE+ E+ A +L+K++P S +Y L+SN+YA+ G W+ V+ +R+ M+S
Sbjct: 735 TLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHN 794
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++KE G SW +V D +H F D HP+ E IY + + L +M+
Sbjct: 795 LKKEPGCSWIEVK--DEVHTFLVCDKAHPKCEMIYSLLDLLICDMR 838
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/528 (31%), Positives = 286/528 (54%), Gaps = 20/528 (3%)
Query: 7 SGQFDKALCIFNNL-NNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYST 62
+G+ + A +FN++ ++ D+VSWN+++SG+ ++ D +++ L+M +GV+FD T +
Sbjct: 103 AGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAV 162
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
+L C E + G+Q+H + V+ G D +V G+AL+ MY++ L ++ VF E+P+K+
Sbjct: 163 SLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKN 222
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
+SW+A ++G Q+ D + + EM RKG+ + ++ S +C LG Q+H
Sbjct: 223 WISWSAAIAGCVQN-DQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLH 281
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMNRE-- 237
++K +G+ V VG + Y+KC+ DA K+F + D N+ S+ MI + N +
Sbjct: 282 CHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGF 341
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
A LF +++ + ++V+ G + A ++ EG +HGL IK+N S V N ++
Sbjct: 342 QAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAIL 401
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNA 355
MY + ++ ++ +FDE+ R+ +SWNA+I+ QN S + FG + SK P+
Sbjct: 402 DMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNE-SEGKTLSHFGAMLRSKMEPDE 460
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+T+GSVL A S +G H IIK G+ VGSAL+DMY K G + E++++
Sbjct: 461 FTYGSVLKACAGQRAFS--NGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIH 518
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+E++ +W AIIS + E F M GV PD+ T+ +VL C +
Sbjct: 519 YRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVG 578
Query: 476 KGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
G+ + M+K +E D Y S +VDM + G + ++ + + P
Sbjct: 579 LGKQIHAQMIK---LELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP 623
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 243/503 (48%), Gaps = 56/503 (11%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+S C + G + H+ ++ G V+V N LI MY + L A +VF+EM
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 119 PNKD--------------------------------SVSWNAILSGYTQDGDYGVEAILA 146
P +D VSWN+++SGY Q+GD ++I
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQ-KSIAV 144
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
++M G+ DH + + C ++ LG QIHG++++MG+ V G+ L+ Y+K
Sbjct: 145 FLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAK 204
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGL 261
C D+ VF + D+N ISW+ I+ ++ + LFKEM+ G+ + T+ +
Sbjct: 205 CNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASV 264
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
+ + + + G +H +KT+F S+ V + MYA+ ++M D+ K+F L +
Sbjct: 265 FRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNL 324
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFG--SVLNAVGAAEDIS-LKHGQR 378
S+NA+I GYA+N A + F + K N+++F S+ A+ AA I G +
Sbjct: 325 QSYNAMIIGYARNEQGFQAFKLFLQLQK----NSFSFDEVSLSGALSAAAVIKGHSEGLQ 380
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H IK L S+ V +A+LDMYGK G++ E+ +F+E + + +W AII+A ++
Sbjct: 381 LHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNES 440
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCG-----RNGMIHKGRHLFDSMLKDYHIEPS 493
++ F M + PD T+ SVL C NGM GR + M +
Sbjct: 441 EGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVG-- 498
Query: 494 PDHYSCMVDMLGRVGRLEEAEEL 516
S +VDM + G +EEAE++
Sbjct: 499 ----SALVDMYSKCGMMEEAEKI 517
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 129/303 (42%), Gaps = 46/303 (15%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
TF + S +K G+ H I + F V NCLI MY + +++ + KVF+E+
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 317 SCREI--------------------------------ISWNALISGYAQNGLSLAAVQAF 344
R+I +SWN+LISGY QNG ++ F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 345 -----FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
GV+ + T L ED L G + H +++G D D + GSAL+
Sbjct: 146 LKMRDLGVMFDHT----TLAVSLKICSLLEDQVL--GIQIHGIAVQMGFDYDVVTGSALV 199
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K S+ +S VF+E +K+ +W+A I+ ++ + FKEM+ KG+
Sbjct: 200 DMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQS 259
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLK-DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
T+ SV C G L LK D+ + + +DM + + +A +L
Sbjct: 260 TYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVG--TATLDMYAKCDNMSDAYKLFS 317
Query: 519 QIP 521
+P
Sbjct: 318 LLP 320
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 346/615 (56%), Gaps = 30/615 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFD 56
+++Y K G +A+ +F+ + NP +VSW +LSG+ KS+DA S AL M GV +
Sbjct: 292 VDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFS-ALEIFKEMRHSGVEIN 350
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF- 115
T ++ +S C Q+H+ + K G + V ALI+MYS+ G + + +VF
Sbjct: 351 NCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFE 410
Query: 116 --DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
D++ ++ V N +++ ++Q G +AI M+++GLR D S S S
Sbjct: 411 DLDDIQRQNIV--NVMITSFSQSKKPG-KAIRLFTRMLQEGLRTDEFSVCSLLSVL---D 464
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L LGKQ+HG ++K G ++VG+ L + YSKC ++ K+F+ + ++ W +MIS
Sbjct: 465 CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMIS 524
Query: 234 MNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
E +A+ LF EM DG P++ T ++ S + G+ IHG ++
Sbjct: 525 GFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDK 584
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ + L+ MY++ S++ + +V+D L + +S ++LISGY+Q+GL +Q F +
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGL----IQDGFLLF 640
Query: 349 KESKPNAYT-----FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
++ + +T S+L A +++ SL G + H++I K+GL ++P VGS+LL MY
Sbjct: 641 RDMVMSGFTMDSFAISSILKAAALSDESSL--GAQVHAYITKIGLCTEPSVGSSLLTMYS 698
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K GSI + + F++ AWTA+I++ A+HG + + M+ KG +PD +TF+
Sbjct: 699 KFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVG 758
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL+ C G++ + +SM+KDY IEP HY CMVD LGR GRL EAE + +
Sbjct: 759 VLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIK 818
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
P V +LL AC+IHG VE+G+ A +++EP+ +G+Y+ +SN+ AE G+W+ V R
Sbjct: 819 PDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETR 878
Query: 584 KGMKSKGVRKEVGFS 598
K MK GV+KE G+S
Sbjct: 879 KLMKGTGVQKEPGWS 893
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 158/558 (28%), Positives = 283/558 (50%), Gaps = 25/558 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y SG A +F+ + PD+VS N ++SG+++ +++L F +M+ +G +
Sbjct: 91 LSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANE 150
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++Y + +S C + LF + +K G V +ALI ++S+ R +A +VF +
Sbjct: 151 ISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRD 210
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLE 176
+ + WN I++G ++ +YG A+ L M G + D +++S +AC + L
Sbjct: 211 SLSANVYCWNTIIAGALRNQNYG--AVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLR 268
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--M 234
GK + IK G V V ++ Y+KC +A +VF R+ + +V+SWT M+S
Sbjct: 269 FGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYT 327
Query: 235 NREDAVS---LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
DA S +FKEMR GV N+ T +I A ++V E +H K+ F + S
Sbjct: 328 KSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSS 387
Query: 292 VCNCLITMYARFESMQDSEKVF---DELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
V LI+MY++ + SE+VF D++ + I+ N +I+ ++Q+ A++ F ++
Sbjct: 388 VAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRML 445
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+E + + ++ S+L+ + L G++ H + +K GL D VGS+L +Y K GS
Sbjct: 446 QEGLRTDEFSVCSLLSVLDC-----LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS 500
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ES ++F K W ++IS +G + F EM + G PD T +VLTV
Sbjct: 501 LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C + + +G+ + L+ I+ D S +V+M + G L+ A ++ ++P +S
Sbjct: 561 CSSHPSLPRGKEIHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVS 619
Query: 528 VLQSLLGACRIHGNVEMG 545
SL+ HG ++ G
Sbjct: 620 C-SSLISGYSQHGLIQDG 636
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 150/575 (26%), Positives = 282/575 (49%), Gaps = 42/575 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFD---- 56
++++ K+ +F+ A +F + + ++ WNT+++G ALR G VFD
Sbjct: 192 IDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAG----------ALRNQNYGAVFDLFHE 241
Query: 57 ---------AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
+ TYS+ L+ C E FG + + ++K G + +V+V A++ +Y++ G
Sbjct: 242 MCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGH 300
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
+ EA VF +PN VSW +LSGYT+ D A+ EM G+ +++ + TS S
Sbjct: 301 MAEAMEVFSRIPNPSVVSWTVMLSGYTKSND-AFSALEIFKEMRHSGVEINNCTVTSVIS 359
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD---RN 224
ACG + Q+H K G+ SV L+S YSK + +VF + D +N
Sbjct: 360 ACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN 419
Query: 225 VIS-WTTMISMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+++ T S +++ A+ LF M +G+ ++ + L+ + NL G+ +HG
Sbjct: 420 IVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL---GKQVHGYT 476
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
+K+ + + +V + L T+Y++ S+++S K+F + ++ W ++ISG+ + G A+
Sbjct: 477 LKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAI 536
Query: 342 QAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
F ++ + + P+ T +VL + SL G+ H + ++ G+D +GSAL++
Sbjct: 537 GLFSEMLDDGTSPDESTLAAVLTVCSSHP--SLPRGKEIHGYTLRAGIDKGMDLGSALVN 594
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K GS+ +++V++ E + +++IS ++HG + F++M G DS
Sbjct: 595 MYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFA 654
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLK-DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
S+L + G + + K EPS S ++ M + G +++ + Q
Sbjct: 655 ISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG--SSLLTMYSKFGSIDDCCKAFSQ 712
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
I GP L +L+ + HG ++ + LMK
Sbjct: 713 I-NGPDLIAWTALIASYAQHGKANEALQVYN-LMK 745
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 217/458 (47%), Gaps = 28/458 (6%)
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
LQ H L+ ++ L +V++ +L++ YS G + +A ++FD +P D VS N ++SGY Q
Sbjct: 70 LQAH-LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQH 128
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
+ E++ +M G + +S+ S SAC + + + +IKMGY + V
Sbjct: 129 RLFE-ESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVV 187
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGV 251
+ L+ +SK DA KVFR NV W T+I+ N LF EM +
Sbjct: 188 ESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ 247
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ T+ ++ A + ++ G+++ IK + VC ++ +YA+ M ++ +
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAME 306
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-----NAYTFGSVLNAVG 366
VF + ++SW ++SGY ++ + +A++ F KE + N T SV++A G
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIF----KEMRHSGVEINNCTVTSVISACG 362
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE-KSEFA 425
+ + H+ + K G D V +AL+ MY K G I S++VF + + + +
Sbjct: 363 RPSMVC--EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI 420
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV--CGRNGMIHKGRHLFDS 483
+I++ ++ + F M +G+R D + S+L+V C G G L
Sbjct: 421 VNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSG 480
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
++ D + S + + + G LEE+ +L IP
Sbjct: 481 LVLDLTVGSS------LFTLYSKCGSLEESYKLFQGIP 512
>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 202/552 (36%), Positives = 316/552 (57%), Gaps = 15/552 (2%)
Query: 101 MYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDH 159
MY++ G L +A ++FDEMP +D+VSWN ++SG+ +DG + V +M G RLD
Sbjct: 1 MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDV-GFGFFKQMQSLGFYRLDQ 59
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR 219
+ T+ SAC + + K +H +++ G+ +SVGN L+++Y KC + +VF
Sbjct: 60 ATLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDE 119
Query: 220 MHDRNVISWTTMIS--MNRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
M +RNVI+WT +IS + E D++ LF EM V PN +T++ + A S ++EG
Sbjct: 120 MLERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREG 179
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
IHG K S+ V + L+ MY++ SM D+ ++F+ + +S +++G+AQN
Sbjct: 180 CQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQN 239
Query: 335 GLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
G A+Q F +++ ++ ++ +VL GA D SL GQ+ HS +IK S+P
Sbjct: 240 GFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGA--DTSLGLGQQIHSLVIKRSFGSNPF 297
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
VG+ L++MY K G + +S +VF+ + +W ++I+A ARHGD + +KEM KG
Sbjct: 298 VGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKG 357
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
V P +TFLS+L C G++ KG SM + + + P +HY+C+VDMLGR G L EA
Sbjct: 358 VEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLNEA 417
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEK 573
+ + +P P + V Q+LLGAC IHG+ EMG+ A+ L+ P Y+L++N+Y+ K
Sbjct: 418 KTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYILLANIYSSK 477
Query: 574 GDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY-RMAECLG 632
G W+ A K MK V KE G SW ++ + LH F D HP++E IY +AE G
Sbjct: 478 GRWKERAKTIKRMKEMCVAKETGISWIEIE--NNLHSFVVEDKMHPQAEIIYGVLAELFG 535
Query: 633 SEMK--YLNSKR 642
+ Y+ KR
Sbjct: 536 HMIDEGYVPDKR 547
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 247/529 (46%), Gaps = 50/529 (9%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVV-FDAV 58
MY K+G A +F+ + D VSWN ++SGF K D F +M +G D
Sbjct: 1 MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T +T LS C E +H L V G E+ VGNALIT Y + G +VFDEM
Sbjct: 61 TLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEM 120
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
++ ++W AI+SG Q Y +++ +EM + + +++ S+ AC + L G
Sbjct: 121 LERNVITWTAIISGLVQSELYR-DSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREG 179
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN 235
QIHG K+G + V + LM YSKC GD ++F + +S T ++ + N
Sbjct: 180 CQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQN 239
Query: 236 --REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E+A+ F +M G + ++ + G+ IH L IK +F S P V
Sbjct: 240 GFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVG 299
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESK 352
N LI MY++ ++DS KVF + C +SWN++I+ +A++G A+Q + + +K +
Sbjct: 300 NGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVE 359
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P TF S+L+A H +++ G++ +S
Sbjct: 360 PTDVTFLSLLHACS-------------HVGLVEKGME------------------FLKSM 388
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE-MENKGVRPDSITFLSVLTVCGRN 471
++ + E + ++ L R G ++N+ K +E ++PD + + ++L CG +
Sbjct: 389 TEVHKLTPRMEH-YACVVDMLGRAG----LLNEAKTFIEGLPIKPDVLVWQALLGACGIH 443
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
G G++ + ++ +PSP Y + ++ GR +E + + ++
Sbjct: 444 GDPEMGKYAAEHLILSAPEKPSP--YILLANIYSSKGRWKERAKTIKRM 490
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M+MY K G L IF + D VS +L+GF ++ ++A+ F ++M G D+
Sbjct: 202 MDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQNGFEEEAMQFFVKMLEAGTEIDS 261
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S L G Q+HSL++K S +VGN LI MYS+ G L ++ +VF
Sbjct: 262 NMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSR 321
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH----EK 173
MP +SVSWN++++ + + GD G A+ EM KG+ V+F S AC H EK
Sbjct: 322 MPCMNSVSWNSMIAAFARHGD-GSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEK 380
Query: 174 NLELGK---QIHGVSIKM 188
+E K ++H ++ +M
Sbjct: 381 GMEFLKSMTEVHKLTPRM 398
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 219/651 (33%), Positives = 355/651 (54%), Gaps = 23/651 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD----ALSFALRMNLIGVVFDA-- 57
+ + G D A IF + ++VS N ++ G K A F +L+G+ D+
Sbjct: 800 FARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYV 859
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFD 116
V S F + EG G ++H+ +++ GL D++V +GN L+ MY++ G + +A VF+
Sbjct: 860 VLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE 919
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M KDSVSWN+++SG Q+ + +A + + M R G + + S S+C +
Sbjct: 920 LMVEKDSVSWNSLISGLDQN-ECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIM 978
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
LG+QIH +K+G T VSV N L++ Y++ + KVF M + + +SW ++I
Sbjct: 979 LGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALS 1038
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ AV F EM G + VTFI ++ A+S +L + IH L +K +
Sbjct: 1039 DSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDT 1098
Query: 291 SVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQ-AFFGVI 348
++ N L++ Y + M + EK+F +S R+ +SWN++ISGY N L A+ +F +
Sbjct: 1099 AIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQ 1158
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
K + +++TF +VL+A + +L+ G H+ I+ ++SD +VGSAL+DMY K G I
Sbjct: 1159 KGQRLDSFTFATVLSACASVA--TLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRI 1216
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT-FLSVLTV 467
+ R F ++ ++W ++IS ARHG E + F M G PD + L VL+
Sbjct: 1217 DYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSA 1276
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G + +G F SM + Y + P +H+SCMVD+LGR G+L+E + + +P P +
Sbjct: 1277 CSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVL 1336
Query: 528 VLQSLLGA-CRIHG-NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ +++LGA CR +G N E+G R A+ L+++EP + +YVL++N+YA WE VA R
Sbjct: 1337 IWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXA 1396
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
MK V+KE G SW + DG+H F +GD HP + IY L +M+
Sbjct: 1397 MKEAAVKKEAGCSWVTMK--DGVHVFVAGDKLHPEKDXIYDKLRELNRKMR 1445
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/433 (32%), Positives = 223/433 (51%), Gaps = 32/433 (7%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
+LH +K+G +++ N LI +Y R G L A+++FDEM N++ V+W ++SGYTQ+G
Sbjct: 565 ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNG 624
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE--KNLELGKQIHGVSIKMGYGTHVS 195
EA +M+R G +H +F SA AC +LG QIHG+ K YG+ V
Sbjct: 625 KPD-EACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVV 683
Query: 196 VGNVLMSTYSKC-EVTGDANKVFRRMHDRNVISWTTMISM--NREDAVS---LFKEMRLD 249
V NVL+S Y C + DA VF R+ RN ISW ++IS+ R D VS LF M+ +
Sbjct: 684 VCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKE 743
Query: 250 GV----CPNDVTFIGLIHAISIGNLVKEGRMIHGLCI---------KTNFLSEPSVCNCL 296
G+ PN+ TF LI A + GLC+ K+ FL + V + L
Sbjct: 744 GLGFSFKPNEYTFGSLITAAC-------SSVDFGLCVLEQMLARVEKSGFLQDLYVGSAL 796
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAY 356
++ +ARF D++ +F+++ R ++S N L+ G + AA + F + N+
Sbjct: 797 VSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD 856
Query: 357 TFGSVLNAVG--AAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQR 413
++ +L+A + + + G+ H+H+I+ GL+ + + +G+ L++MY K G+I ++
Sbjct: 857 SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS 916
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF EK +W ++IS L ++ E F M G P + T +S L+ C G
Sbjct: 917 VFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGW 976
Query: 474 IHKGRHLFDSMLK 486
I G + LK
Sbjct: 977 IMLGEQIHCDGLK 989
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 155/547 (28%), Positives = 284/547 (51%), Gaps = 35/547 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+N+Y + G A +F+ ++N ++V+W ++SG+ K D+A + M G + +
Sbjct: 586 INIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNH 645
Query: 58 VTYSTALSFCLDH--EGFLFGLQLHSLIVKFGLDSEVYVGNALITMY-SRWGRLVEARRV 114
+ +AL C + G G+Q+H LI K S+V V N LI+MY S +AR V
Sbjct: 646 YAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSV 705
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL----RLDHVSFTSAASACG 170
FD + ++S+SWN+I+S Y++ GD V A M ++GL + + +F S +A
Sbjct: 706 FDRIGIRNSISWNSIISVYSRRGD-XVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAAC 764
Query: 171 HEKNLELG--KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
+ L +Q+ K G+ + VG+ L+S +++ +T DA +F +M RNV+S
Sbjct: 765 SSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSM 824
Query: 229 TTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM----IHG 279
++ E A +F EM+ D V N +++ L+ A S ++++EGR +H
Sbjct: 825 NGLMVGLVKQKQGEAAAKVFHEMK-DLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHA 883
Query: 280 LCIKTNFL-SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
I+T ++ ++ N L+ MYA+ ++ D+ VF+ + ++ +SWN+LISG QN S
Sbjct: 884 HVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSE 943
Query: 339 AAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A ++F + + S P+ +T S L++ + I L G++ H +K+GLD+D V +A
Sbjct: 944 DAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIML--GEQIHCDGLKLGLDTDVSVSNA 1001
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ----FKEMENKG 453
LL +Y + G E +VF+ E + +W ++I AL+ D E+ ++Q F EM G
Sbjct: 1002 LLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALS---DSEASVSQAVKYFLEMMRGG 1058
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+TF+++L+ + H+ H +++ Y + + ++ G+ G + E
Sbjct: 1059 WGLSRVTFINILSAVSSLSL-HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNEC 1117
Query: 514 EELVGQI 520
E++ ++
Sbjct: 1118 EKIFARM 1124
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 213/447 (47%), Gaps = 13/447 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMY KSG A +F + D VSWN+++SG ++ S+DA LRM G +
Sbjct: 902 VNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSN 961
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + LS C + G Q+H +K GLD++V V NAL+ +Y+ G E +VF
Sbjct: 962 FTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSL 1021
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D VSWN+++ + +A+ +EMMR G L V+F + SA E+
Sbjct: 1022 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEV 1081
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS--M 234
QIH + +K ++GN L+S Y KC + K+F RM + R+ +SW +MIS +
Sbjct: 1082 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 1141
Query: 235 NRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E A+ L M G + TF ++ A + ++ G +H I+ S+
Sbjct: 1142 HNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVV 1201
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + L+ MY++ + + + F+ + R + SWN++ISGYA++G A++ F ++ +
Sbjct: 1202 VGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDG 1261
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIF 409
+P + +L + A + H + P V S ++D+ G+ G +
Sbjct: 1262 QPPDHV-APLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLD 1320
Query: 410 ESQRVFNETQEKSE-FAWTAIISALAR 435
E N K W ++ A R
Sbjct: 1321 EVGDFINSMPMKPNVLIWRTVLGACCR 1347
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 163/317 (51%), Gaps = 16/317 (5%)
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
E +++H SIK G+ ++ + N L++ Y + G A K+F M +RN+++W +IS
Sbjct: 561 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI--SIGNLVKEGRMIHGLCIKTNFLS 288
++A + F++M G PN F + A S + K G IHGL KT + S
Sbjct: 621 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 680
Query: 289 EPSVCNCLITMYAR-FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ VCN LI+MY +S D+ VFD + R ISWN++IS Y++ G ++A F +
Sbjct: 681 DVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSM 740
Query: 348 IKES-----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
KE KPN YTFGS++ A ++ D L ++ + + K G D VGSAL+ +
Sbjct: 741 QKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGF 800
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN-KGVRPDSITF 461
+ G +++ +F + ++ + ++ L + E+ F EM++ G+ DS +
Sbjct: 801 ARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDS--Y 858
Query: 462 LSVLTVCGRNGMIHKGR 478
+ +L+ ++ +GR
Sbjct: 859 VVLLSAFSEFSVLEEGR 875
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 16/327 (4%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
TF LI+ +E R +H IK F+ + N LI +Y R + ++K+FDE+
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKH 375
S R +++W LISGY QNG A F +++ PN Y FGS L A + K
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 665
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGK-RGSIFESQRVFNETQEKSEFAWTAIISALA 434
G + H I K SD +V + L+ MYG S +++ VF+ ++ +W +IIS +
Sbjct: 666 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYS 725
Query: 435 RHGDYESVMNQFKEMENKGV----RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
R GD S + F M+ +G+ +P+ TF S++T + + G + + ML +
Sbjct: 726 RRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSS--VDFGLCVLEQMLA--RV 781
Query: 491 EPS---PDHY--SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
E S D Y S +V R G ++A+ + Q+ G + + L+ E
Sbjct: 782 EKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQM-GVRNVVSMNGLMVGLVKQKQGEAA 840
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAE 572
++ + + S SYV++ + ++E
Sbjct: 841 AKVFHEMKDLVGINSDSYVVLLSAFSE 867
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 209/654 (31%), Positives = 355/654 (54%), Gaps = 21/654 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
+Y Q A +F+ + NP ++ WN ++ + + D A+ M +GV + T
Sbjct: 52 LYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYT 111
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y L C G+++HS FGL+S+V+V AL+ Y++ G LVEA+R+F M
Sbjct: 112 YPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS 171
Query: 120 NKDSVSWNAILSGYTQDGDYGV--EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
++D V+WNA+++G + YG+ +A+ +++M +G+ + + G K L
Sbjct: 172 HRDVVAWNAMIAGCSL---YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGH 228
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GK +HG ++ + V VG L+ Y+KC+ A K+F M RN +SW+ MI
Sbjct: 229 GKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVA 288
Query: 233 SMNREDAVSLFKEMRL-DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
S ++A+ LF +M L D + P VT ++ A + + GR +H IK + +
Sbjct: 289 SDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDIL 348
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ N L++MYA+ + D+ + FDE++ ++ +S++A++SG QNG + A + F +++ S
Sbjct: 349 LGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNG-NAAVALSIFRMMQLS 407
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ T VL A + +L+HG H ++I G +D ++ +AL+DMY K G I
Sbjct: 408 GIDPDLTTMLGVLPA--CSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKIS 465
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ VFN +W A+I HG + F ++ G++PD ITF+ +L+ C
Sbjct: 466 FAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCS 525
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+G++ +GR FD+M +D+ I P +H CMVD+LGR G ++EA + +P P + +
Sbjct: 526 HSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIW 585
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+LL ACRIH N+E+GE ++ + + P +G++VL+SN+Y+ G W+ A +R K
Sbjct: 586 SALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDW 645
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
G++K G SW ++ I +H F GD +H + +I R E L EMK L + E
Sbjct: 646 GLKKIPGCSWIEINGI--VHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAE 697
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 236/473 (49%), Gaps = 21/473 (4%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y L C+ + ++H +K +++ V + L +Y ++V ARR+FDE+P
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
N + WN I+ Y +G + AI M+ G+R + ++ AC +E G
Sbjct: 71 NPSVILWNQIIRAYAWNGPFD-GAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR--- 236
+IH + G + V V L+ Y+KC + +A ++F M R+V++W MI+
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+DAV L +M+ +G+CPN T +G++ + + G+ +HG C++ +F + V
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-- 352
L+ MYA+ + + + K+FD + R +SW+A+I GY + A++ F +I +
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD 309
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P T GSVL A D+S G++ H +IIK+G D ++G+ LL MY K G I ++
Sbjct: 310 PTPVTLGSVLRACAKLTDLS--RGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAI 367
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG--- 469
R F+E K +++AI+S ++G+ ++ F+ M+ G+ PD T L VL C
Sbjct: 368 RFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLA 427
Query: 470 --RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
++G G + D I + ++DM + G++ A E+ ++
Sbjct: 428 ALQHGFCSHGYLIVRGFATDTLI------CNALIDMYSKCGKISFAREVFNRM 474
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 244/481 (50%), Gaps = 39/481 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
++ Y K G +A +F+++++ D+V+WN +++G + DDA+ ++M G+ ++
Sbjct: 151 VDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNS 210
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T L + + G LH V+ D+ V VG L+ MY++ L+ AR++FD
Sbjct: 211 STIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDV 270
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
M ++ VSW+A++ GY D EA+ +M+ K + V+ S AC +L
Sbjct: 271 MGVRNEVSWSAMIGGYVA-SDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLS 329
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+++H IK+G + +GN L+S Y+KC V DA + F M+ ++ +S++ ++S
Sbjct: 330 RGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCV 389
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N A+S+F+ M+L G+ P+ T +G++ A S ++ G HG I F ++
Sbjct: 390 QNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTL 449
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+CN LI MY++ + + +VF+ + +I+SWNA+I GY +GL + A+ F ++
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG 509
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG------LDSD-PIVGS-----AL 398
KP+ TF +L++ HS ++ G + D IV +
Sbjct: 510 LKPDDITFICLLSSCS-------------HSGLVMEGRLWFDAMSRDFSIVPRMEHCICM 556
Query: 399 LDMYGKRGSIFESQR-VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
+D+ G+ G I E+ + N E W+A++SA H + E K++++ G P+
Sbjct: 557 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG--PE 614
Query: 458 S 458
S
Sbjct: 615 S 615
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 5/188 (2%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SL ++ H H +K ++D V L +Y + ++R+F+E S W II
Sbjct: 23 SLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIR 82
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A A +G ++ ++ + M + GVRP+ T+ VL C I G + S K + +E
Sbjct: 83 AYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI-HSHAKMFGLE 141
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
+ +VD + G L EA+ L + + +++ C ++G + +
Sbjct: 142 SDVFVCTALVDFYAKCGILVEAQRLFSSM-SHRDVVAWNAMIAGCSLYG---LCDDAVQL 197
Query: 552 LMKMEPAG 559
+M+M+ G
Sbjct: 198 IMQMQEEG 205
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 212/652 (32%), Positives = 361/652 (55%), Gaps = 19/652 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y G A IF+N++ D V++NT+++G + + A+ RM L G+ D+
Sbjct: 313 VSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDS 372
Query: 58 VTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T ++ + C +G LF G QLH+ K G S + AL+ +Y++ + A F
Sbjct: 373 NTLASLVVAC-SSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFL 431
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E ++ V WN +L Y D + +M + + + ++ S C +LE
Sbjct: 432 ETEVENVVLWNVMLVAYGLLDDLR-NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 490
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
LG+QIH IK + + V +VL+ Y+K A + R ++V+SWTTMI+
Sbjct: 491 LGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 550
Query: 234 -MNRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N +D A++ F++M G+ ++V + A + +KEG+ IH + F S+
Sbjct: 551 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 610
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
N L+T+Y++ +++++ F++ + I+WNAL+SG+ Q+G + A++ F + +E
Sbjct: 611 FQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREG 670
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
N +TFGS + A A+E ++K G++ H+ I K G DS+ V +A++ MY K GSI +
Sbjct: 671 IDSNNFTFGSAVKA--ASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISD 728
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+++ F E K+E +W A+I+A ++HG ++ F +M + VRP+ +T + VL+ C
Sbjct: 729 AKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 788
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ KG F+SM +Y + P P+HY C+VDML R G L A++ + ++P P V +
Sbjct: 789 IGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWR 848
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL AC +H N+E+GE A L+++EP S +YVL+SNLYA W+ + R+ MK KG
Sbjct: 849 TLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKG 908
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL---GSEMKYLN 639
V+KE G SW +V + +H F GD HP ++EI+ + L SE+ Y+
Sbjct: 909 VKKEPGQSWIEVK--NSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQ 958
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 263/525 (50%), Gaps = 15/525 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++Y ++G D+A +F+ L D SW ++SG K++ +A+ M ++G++
Sbjct: 212 IDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTP 271
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+S+ LS C E G QLH L++K G S+ YV NAL+++Y G L+ A +F
Sbjct: 272 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSN 331
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D+V++N +++G +Q G YG +A+ M GL D + S AC + L
Sbjct: 332 MSQRDAVTYNTLINGLSQCG-YGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFS 390
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+Q+H + K+G+ ++ + L++ Y+KC A F NV+ W M+
Sbjct: 391 GQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGL 450
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ ++ +F++M+++ + PN T+ ++ I +G+L + G IH IKT+F
Sbjct: 451 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL-ELGEQIHSQIIKTSFQLNAY 509
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VC+ LI MYA+ + + + + ++++SW +I+GY Q A+ F ++
Sbjct: 510 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 569
Query: 352 KPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + NAV A + +LK GQ+ H+ G SD +AL+ +Y K G+I E
Sbjct: 570 IRSDEV--GLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEE 627
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ F +T+ AW A++S + G+ E + F M +G+ ++ TF S +
Sbjct: 628 AYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASE 687
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+ +G+ + + K + + + + ++ M + G + +A++
Sbjct: 688 TANMKQGKQVHAVITKTGY-DSETEVCNAIISMYAKCGSISDAKK 731
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 167/613 (27%), Positives = 289/613 (47%), Gaps = 32/613 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS---FAL--RMNLIGVVF 55
++ Y G D AL +F+ + I +WN ++ E + +LS F L RM V
Sbjct: 110 LDFYLFKGDLDGALKVFDEMPERTIFTWNKMIK--ELASRSLSGKVFCLFGRMVNENVTP 167
Query: 56 DAVTYSTALSFCLDHE-GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ T+S L C F Q+H+ I+ GL V N LI +YSR G + ARRV
Sbjct: 168 NEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRV 227
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD + KD SW A++SG +++ + VEAI +M G+ +F+S SAC ++
Sbjct: 228 FDGLYLKDHSSWVAMISGLSKN-ECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIES 286
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
LE+G+Q+HG+ +K+G+ + V N L+S Y A +F M R+ +++ T+I+
Sbjct: 287 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLING 346
Query: 234 MNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+++ E A+ LFK M+LDG+ P+ T L+ A S + G+ +H K F S
Sbjct: 347 LSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASN 406
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-- 347
+ L+ +YA+ ++ + F E ++ WN ++ Y GL L ++ F +
Sbjct: 407 DKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAY---GL-LDDLRNSFRIFR 462
Query: 348 ---IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
I+E PN YT+ S+L D+ L G++ HS IIK + V S L+DMY K
Sbjct: 463 QMQIEEIVPNQYTYPSILKTCIRLGDLEL--GEQIHSQIIKTSFQLNAYVCSVLIDMYAK 520
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + + + K +WT +I+ ++ + + F++M ++G+R D + +
Sbjct: 521 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNA 580
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
++ C + +G+ + P + +V + + G +EEA Q G
Sbjct: 581 VSACAGLQALKEGQQIHAQACVSGFSSDLP-FQNALVTLYSKCGNIEEAYLAFEQTEAGD 639
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
++ +L+ + GN E R+ A M E S ++ S + A A +++
Sbjct: 640 NIA-WNALVSGFQQSGNNEEALRVF-ARMNREGIDSNNFTFGSAVKAASE----TANMKQ 693
Query: 585 GMKSKGVRKEVGF 597
G + V + G+
Sbjct: 694 GKQVHAVITKTGY 706
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 230/466 (49%), Gaps = 16/466 (3%)
Query: 67 CLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVS 125
CL G L G +LHS I+K G D+ + L+ Y G L A +VFDEMP + +
Sbjct: 77 CLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFT 136
Query: 126 WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC-GHEKNLELGKQIHGV 184
WN ++ G + M+ + + + +F+ AC G ++ +QIH
Sbjct: 137 WNKMIKELASRSLSG-KVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHAR 195
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNRE----DA 239
I G G V N L+ YS+ A +VF ++ ++ SW MIS +++ +A
Sbjct: 196 IIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEA 255
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ LF +M + G+ P F ++ A ++ G +HGL +K F S+ VCN L+++
Sbjct: 256 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 315
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTF 358
Y S+ +E +F +S R+ +++N LI+G +Q G A++ F + + +P++ T
Sbjct: 316 YFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTL 375
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
S++ V + D +L GQ+ H++ K+G S+ + ALL++Y K I + F ET
Sbjct: 376 ASLV--VACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLET 433
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+ ++ W ++ A D + F++M+ + + P+ T+ S+L C R G + G
Sbjct: 434 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 493
Query: 479 HLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIPG 522
+ ++K + Y C ++DM ++G+L+ A +++ + G
Sbjct: 494 QIHSQIIK---TSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 536
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 175/410 (42%), Gaps = 49/410 (11%)
Query: 216 VFRRMHDRNVISWTTMISMNREDAVSL-------FKEMRLD-----GVCPNDVTFIGLIH 263
V R++ R V+ I A+S+ F+E +D G+ PN T L+
Sbjct: 16 VPRKLKTRTVLRTLCQIRRASFTAISVSISEDESFQENGIDSVENCGIRPNHQTLKWLLE 75
Query: 264 -AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
+ + EGR +H +K F + + L+ Y + + KVFDE+ R I
Sbjct: 76 GCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIF 135
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
+WN +I A LS F ++ E+ PN TF VL A ++ ++ H+
Sbjct: 136 TWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG-SVAFDVVEQIHA 194
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
II GL IV + L+D+Y + G + ++RVF+ K +W A+IS L+++
Sbjct: 195 RIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVE 254
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK--------------- 486
+ F +M G+ P F SVL+ C + + G L +LK
Sbjct: 255 AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 314
Query: 487 -DYHIEP--SPDH------------YSCMVDMLGRVGRLEEAEELVG--QIPG-GPGLSV 528
+H+ S +H Y+ +++ L + G E+A EL Q+ G P +
Sbjct: 315 LYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNT 374
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYV-LMSNLYAEKGDWE 577
L SL+ AC G + G+++ K+ A + + NLYA+ D E
Sbjct: 375 LASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIE 424
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 207/647 (31%), Positives = 353/647 (54%), Gaps = 18/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+ MY + + A +F+ + + VSW +V++ +S DAL M G D
Sbjct: 83 ITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQ 142
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + C + G Q+H+ +K S++ V NAL+TMYS+ G + + +F
Sbjct: 143 FALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGR 202
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNLE 176
M KD +SW +I++G+ Q G +EA+ EM+ +G+ + F S SACG +LE
Sbjct: 203 MREKDPISWGSIIAGFAQQG-CEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLE 261
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+QIH +S+K + G L Y++C+ A +VF + +++SW ++I+
Sbjct: 262 YGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACS 321
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+A+ L EMR G+ P+ +T GL+ A + ++ GR++H +K + S
Sbjct: 322 VEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVS 381
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VCN L++MYAR + VF E R++++WN++++ Q+ L V F +++ S
Sbjct: 382 VCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQ-HLEVVFKLFNLLQRS 440
Query: 352 KP--NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P + + +VL+A +AE + ++ H+ KVGL +D ++ + L+D Y K GS+
Sbjct: 441 LPSLDRISLNNVLSA--SAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLD 498
Query: 410 ESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ ++F S+ F+W+++I A+ G ++ F M N GVRP+ +TF+ VLT C
Sbjct: 499 DAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTAC 558
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
R G++ +G + + M ++ + P+ +H SC++D+L R GRL EA + V Q+P P + +
Sbjct: 559 SRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVM 618
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
++LL + H +VEMG R A+ ++ ++P+ S +YVL+ N+Y+ GDW A L+K M+S
Sbjct: 619 WKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAYVLLCNIYSASGDWNEFARLKKAMRS 678
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
GV+K G SW + L F D +HP SEEIY M E +G EM
Sbjct: 679 SGVKKSPGKSWVKLK--GELKVFIVEDRSHPESEEIYTMLELVGMEM 723
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 202/388 (52%), Gaps = 14/388 (3%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+ N LITMY R AR VFDEMP K+ VSW ++++ + Q+ +A+ M+R
Sbjct: 78 LNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQN-RRSTDALGLFSSMLRS 136
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G D + S AC ++ +G+Q+H ++K G+ + V N L++ YSK + D
Sbjct: 137 GTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADG 196
Query: 214 NKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGV-CPNDVTFIGLIHAISI 267
+F RM +++ ISW ++I+ + +A+ +F+EM +G+ PN+ F + A +
Sbjct: 197 FLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGV 256
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNC-LITMYARFESMQDSEKVFDELSCREIISWNA 326
++ G IH L +K L S C L MYAR + ++ +++VF + +++SWN+
Sbjct: 257 LGSLEYGEQIHSLSVKYR-LDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNS 315
Query: 327 LISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII 384
+I+ + GL L+ ++ S +P+ T +L A + I +HG+ HS+++
Sbjct: 316 IINACSVEGL-LSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAI--QHGRLMHSYLV 372
Query: 385 KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMN 444
K+GLD D V ++LL MY + + VF+ET+++ W +I++A +H E V
Sbjct: 373 KLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFK 432
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNG 472
F ++ D I+ +VL+ G
Sbjct: 433 LFNLLQRSLPSLDRISLNNVLSASAELG 460
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 4/166 (2%)
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHI 383
N I +G AA+ AF + P + + + + +L G H H+
Sbjct: 5 NGTILQLYHSGRLSAALHAFQSIPSSPAPAPLSAATYAALLATCSRLRALCLGCLVHRHL 64
Query: 384 IK---VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
+ L + ++ + L+ MYG+ + ++ VF+E K+ +W ++I+A A++
Sbjct: 65 LASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRST 124
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ F M G PD S + C G I GR + +K
Sbjct: 125 DALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMK 170
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 221/655 (33%), Positives = 341/655 (52%), Gaps = 50/655 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y KSG +A +F+ + V+W ++ G+ + + +A ++M G D VT+
Sbjct: 88 YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 147
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
T LS C HE Q+ + I+K G DS + VGN L+ Y + RL A ++F EMP
Sbjct: 148 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE 207
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
DS ++ A+L + G++ I+ LG+Q
Sbjct: 208 IDSFTFAAVLCA-----NIGLDDIV-------------------------------LGQQ 231
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-- 238
IH IK + +V V N L+ YSK + DA K+F M +++ +S+ +IS D
Sbjct: 232 IHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGK 291
Query: 239 ---AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
A LF+E++ F ++ S + GR IH I T SE V N
Sbjct: 292 HKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNS 351
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PN 354
L+ MYA+ +++E +F L+ R + W A+IS Y Q G +Q F + + S +
Sbjct: 352 LVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIAD 411
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
TF S+L A + +SL G++ HS IIK G S+ GSALLD+Y K GSI ++ +
Sbjct: 412 QATFASLLRASASIASLSL--GKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQT 469
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F E +++ +W A+ISA A++G+ E+ + FKEM G++PDS++FL VL+ C +G++
Sbjct: 470 FQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLV 529
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+G F+SM + Y ++P +HY+ +VDML R GR EAE+L+ ++P P + S+L
Sbjct: 530 EEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLN 589
Query: 535 ACRIHGNVEMGERIADALMKMEP-AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
ACRIH N E+ R AD L ME + YV MSN+YA G WE V+ + K M+ +GV+K
Sbjct: 590 ACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKK 649
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+SW ++ H FS+ D HP+ EEI + + L M+ L K + + AL
Sbjct: 650 LPAYSWVEIK--HETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCAL 702
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 230/481 (47%), Gaps = 86/481 (17%)
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG-- 140
IVK G D + N + + + G L +AR++F++MP+K++VS N ++SGY + G+ G
Sbjct: 38 IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 97
Query: 141 ----------------------------VEAILALIEMMRKGLRLDHVSFTSAASAC-GH 171
EA ++M R G D+V+F + S C GH
Sbjct: 98 RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH 157
Query: 172 EKNLELGKQIHGVS---IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
E+G QI V IK+GY + + VGN L+ +Y K
Sbjct: 158 ----EMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKS--------------------- 192
Query: 229 TTMISMNRED-AVSLFKEM-RLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTN 285
NR D A LFKEM +D TF ++ A I + ++V G+ IH IKTN
Sbjct: 193 ------NRLDLACQLFKEMPEIDS-----FTFAAVLCANIGLDDIVL-GQQIHSFVIKTN 240
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F+ V N L+ Y++ +S+ D+ K+FDE+ ++ +S+N +ISGYA +G A F
Sbjct: 241 FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYA----F 296
Query: 346 GVIKESKPNA-----YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
+ +E + A + F ++L+ A+ + + G++ H+ I DS+ +VG++L+D
Sbjct: 297 DLFRELQFTAFDRKQFPFATMLSI--ASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVD 354
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K G E++ +F +S WTA+ISA + G YE + F +M V D T
Sbjct: 355 MYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQAT 414
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
F S+L + G+ L ++K + + S ++D+ + G +++A + ++
Sbjct: 415 FASLLRASASIASLSLGKQLHSFIIKSGFMS-NVFSGSALLDVYAKCGSIKDAVQTFQEM 473
Query: 521 P 521
P
Sbjct: 474 P 474
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 196/392 (50%), Gaps = 21/392 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE-KSDDALSFALRMNLIGVVFD--A 57
++ Y K A +F+ + D VS+N ++SG+ +F L L FD
Sbjct: 252 LDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQ 311
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++T LS + + G Q+H+ + DSE+ VGN+L+ MY++ G+ EA +F
Sbjct: 312 FPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTN 371
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL-DHVSFTSAASACGHEKNLE 176
+ ++ +V W A++S Y Q G Y E L L MR+ + D +F S A +L
Sbjct: 372 LTHRSAVPWTAMISAYVQKGFY--EEGLQLFNKMRQASVIADQATFASLLRASASIASLS 429
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
LGKQ+H IK G+ ++V G+ L+ Y+KC DA + F+ M DRN++SW MIS
Sbjct: 430 LGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYA 489
Query: 234 MNREDAVSL--FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N E +L FKEM L G+ P+ V+F+G++ A S LV+EG + H + + +P
Sbjct: 490 QNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEG-LWHFNSMTQIYKLDPR 548
Query: 292 VCN--CLITMYARFESMQDSEKVFDELSC-REIISWNALISG---YAQNGLSLAAVQAFF 345
+ ++ M R ++EK+ E+ + I W+++++ + L+ A F
Sbjct: 549 REHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLF 608
Query: 346 GV--IKESKPNAYTFGSVLNAVGAAEDISLKH 375
+ ++++ P ++ A G E++S H
Sbjct: 609 NMEELRDAAPYV-NMSNIYAAAGQWENVSKVH 639
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 88/210 (41%), Gaps = 40/210 (19%)
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHG--QRCHSHIIKVGLDSD-------------- 391
+K +PNA + L ++ + + L+ + I+K G D D
Sbjct: 1 MKPFRPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKN 60
Query: 392 -----------------PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
+ + ++ Y K G++ E++++F+ E++ WT +I +
Sbjct: 61 GELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYS 120
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK---DYHIE 491
+ ++ F +M+ G PD +TF+++L+ C + M ++ + ++K D +
Sbjct: 121 QLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLI 180
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +VD + RL+ A +L ++P
Sbjct: 181 VG----NTLVDSYCKSNRLDLACQLFKEMP 206
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 209/639 (32%), Positives = 346/639 (54%), Gaps = 28/639 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
+ S + AL +F+ +N D WN ++ GF +A+ F RM GV D TY
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ G ++H++++K G S+VYV N+LI++Y + G +A +VF+EMP
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D VSWN+++SGY GD G +++ EM++ G + D S SA AC H + ++GK+
Sbjct: 194 RDIVSWNSMISGYLALGD-GFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 181 IHGVSIKMGYGTHVSVGNVLMST-----YSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
IH +++ + + G+V++ T YSK A ++F M RN+++W MI
Sbjct: 253 IHCHAVR----SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCY 308
Query: 236 RE-----DAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
DA F++M +G+ P+ +T I L+ A +I EGR IHG ++ FL
Sbjct: 309 ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAI----LEGRTIHGYAMRRGFLPH 364
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ LI MY ++ +E +FD ++ + +ISWN++I+ Y QNG + +A++ F +
Sbjct: 365 MVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWD 424
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S P++ T S+L A AE +SL G+ H++I+K S+ I+ ++L+ MY G +
Sbjct: 425 SSLVPDSTTIASILPAY--AESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++++ FN K +W +II A A HG + F EM V P+ TF S+L C
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+GM+ +G F+SM ++Y I+P +HY CM+D++GR G A+ + ++P P +
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
SLL A R H ++ + E A+ + KME +G YVL+ N+YAE G WE V ++ M+S
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMES 662
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
KG+ + S + H F++GD +H + +IY +
Sbjct: 663 KGISRTSSRSTVEAKGKS--HVFTNGDRSHVATNKIYEV 699
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 223/450 (49%), Gaps = 18/450 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLIGVVFDAVT 59
+++Y K G A +F + DIVSWN+++SG+ D S L ++ F
Sbjct: 172 ISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDR 231
Query: 60 YST--ALSFCLDHEGFLFGLQLHSLIVKFGLDS-EVYVGNALITMYSRWGRLVEARRVFD 116
+ST AL C G ++H V+ +++ +V V +++ MYS++G + A R+F+
Sbjct: 232 FSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFN 291
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNL 175
M ++ V+WN ++ Y ++G +A L +M + GL+ D ++ + A +
Sbjct: 292 GMIQRNIVAWNVMIGCYARNGRV-TDAFLCFQKMSEQNGLQPDVITSINLLPASA----I 346
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G+ IHG +++ G+ H+ + L+ Y +C A +F RM ++NVISW ++I+
Sbjct: 347 LEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAY 406
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++ A+ LF+E+ + P+ T ++ A + + EGR IH +K+ + S
Sbjct: 407 VQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNT 466
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ N L+ MYA ++D+ K F+ + ++++SWN++I YA +G +V F +I
Sbjct: 467 IILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS 526
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
PN TF S+L A + + + + S + G+D +LD+ G+ G+
Sbjct: 527 RVNPNKSTFASLLAACSISGMVD-EGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFS 585
Query: 410 ESQRVFNETQ-EKSEFAWTAIISALARHGD 438
++R E + W ++++A H D
Sbjct: 586 AAKRFLEEMPFVPTARIWGSLLNASRNHKD 615
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 209/614 (34%), Positives = 328/614 (53%), Gaps = 18/614 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGV--VFDAV 58
Y G A +F + ++S+N V+ + + DA+S +RM GV V D
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
TY + + GL +H I++ + YV NAL+ MY +G++ AR VFD M
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
N+D +SWN ++SGY ++G Y +A++ M+ + + LDH + S CGH K+LE+G
Sbjct: 179 KNRDVISWNTMISGYYRNG-YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED 238
+ +H + + G + V N L++ Y KC +A VF RM R+VI+WT MI+ ED
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 239 -----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
A+ L + M+ +GV PN VT L+ V +G+ +HG ++ S+ +
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
LI+MYA+ + + +VF S W+A+I+G QN L A+ F + +E +
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN T S+L A A D L+ H ++ K G S + L+ +Y K G++ +
Sbjct: 418 PNIATLNSLLPAYAALAD--LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAH 475
Query: 413 RVFNETQEKSE----FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++FN QEK + W A+IS HGD + + F EM GV P+ ITF S L C
Sbjct: 476 KIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNAC 535
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G++ +G LF ML+ Y +HY+C+VD+LGR GRL+EA L+ IP P +V
Sbjct: 536 SHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTV 595
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LL AC H NV++GE A+ L ++EP +G+YVL++N+YA G W+ + +R M++
Sbjct: 596 WGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMEN 655
Query: 589 KGVRKEVGFSWADV 602
G+RK+ G S ++
Sbjct: 656 VGLRKKPGHSTIEI 669
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 251/518 (48%), Gaps = 34/518 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY G+ + A +F+ + N D++SWNT++SG+ ++ +DAL M V D
Sbjct: 159 LAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDH 218
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C + G +H L+ + L ++ V NAL+ MY + GR+ EAR VFD
Sbjct: 219 ATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDR 278
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M +D ++W +++GYT+DGD VE L L +M+ +G+R + V+ S S CG +
Sbjct: 279 MERRDVITWTCMINGYTEDGD--VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVN 336
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--M 234
GK +HG +++ + + + L+S Y+KC+ +VF + W+ +I+ +
Sbjct: 337 DGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCV 396
Query: 235 NRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E DA+ LFK MR + V PN T L+ A + +++ IH KT F+S
Sbjct: 397 QNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLD 456
Query: 292 VCNCLITMYARFESMQDSEKVFDELS----CREIISWNALISGYAQNGLSLAAVQAFFGV 347
L+ +Y++ +++ + K+F+ + ++++ W ALISGY +G A+Q F +
Sbjct: 457 AATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM 516
Query: 348 IKES-KPNAYTFGSVLNAVGAA----EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
++ PN TF S LNA + E ++L H + IV D+
Sbjct: 517 VRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIV-----DLL 571
Query: 403 GKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDY---ESVMNQFKEMENKGVRPDS 458
G+ G + E+ + E + W A+++A H + E N+ E+E + +
Sbjct: 572 GRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENT-GNY 630
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
+ ++ GR + K R SM+++ + P H
Sbjct: 631 VLLANIYAALGRWKDMEKVR----SMMENVGLRKKPGH 664
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 213/442 (48%), Gaps = 24/442 (5%)
Query: 93 YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR 152
++ + L Y+ G + AR++F+EMP +S+N ++ Y ++G Y +AI I M+
Sbjct: 50 HILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYH-DAISVFIRMVS 108
Query: 153 KGLRL--DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
+G++ D ++ A A G K+++LG +HG ++ +G V N L++ Y
Sbjct: 109 EGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV 168
Query: 211 GDANKVFRRMHDRNVISWTTMIS-------MNREDAVSLFKEMRLDGVCPNDVTFIGLIH 263
A VF M +R+VISW TMIS MN DA+ +F M + V + T + ++
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMN--DALMMFDWMVNESVDLDHATIVSMLP 226
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
++ GR +H L + + V N L+ MY + M ++ VFD + R++I+
Sbjct: 227 VCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVIT 286
Query: 324 WNALISGYAQNG-----LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQR 378
W +I+GY ++G L L + F GV +PNA T S+++ G A + + G+
Sbjct: 287 WTCMINGYTEDGDVENALELCRLMQFEGV----RPNAVTIASLVSVCGDA--LKVNDGKC 340
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H ++ + SD I+ ++L+ MY K + RVF+ + W+AII+ ++
Sbjct: 341 LHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNEL 400
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS 498
+ FK M + V P+ T S+L + + ++ + K + S D +
Sbjct: 401 VSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMS-SLDAAT 459
Query: 499 CMVDMLGRVGRLEEAEELVGQI 520
+V + + G LE A ++ I
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGI 481
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 193/532 (36%), Positives = 310/532 (58%), Gaps = 11/532 (2%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
FG QLH L +K G SE V N++ITMY ++ + AR+VFD MP++D ++WN++++GY
Sbjct: 69 FGTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYL 128
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG-VSIKMGYGTH 193
+G Y EA+ AL ++ GL S S CG ++G+QIH V + G
Sbjct: 129 HNG-YLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQS 187
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRL 248
+ + L+ Y +C + A +VF M +NV+SWTTMIS + ++A + F+ M+
Sbjct: 188 MFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQA 247
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF-ESMQ 307
+GVCPN VT I L+ A + VK G+ IHG + F S PS + L+ MY + E M
Sbjct: 248 EGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMH 307
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVG 366
+E +F+ S R+++ W+++I +++ G S A++ F + +E +PN T +V++A
Sbjct: 308 LAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACT 367
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
SLKHG H +I K G VG+AL++MY K G + S+++F E + W
Sbjct: 368 NLS--SLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTW 425
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+++ISA HG E + F EM +GV+PD+ITFL+VL+ C G++ +G+ +F +
Sbjct: 426 SSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRA 485
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
D I + +HY+C+VD+LGR G+LE A E+ +P P + SL+ AC++HG +++ E
Sbjct: 486 DCEIPLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAE 545
Query: 547 RIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
+A L++ EP +G+Y L++ +YAE G W +R+ MK + ++K GFS
Sbjct: 546 MLAPQLIRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKKCYGFS 597
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 233/455 (51%), Gaps = 26/455 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY K A +F+ + + D ++WN++++G+ + ++AL + L+G+V
Sbjct: 93 ITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEALNDVYLLGLVPKP 152
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSL-IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ +S C G G Q+H+L +V + +++ AL+ Y R G + A RVFD
Sbjct: 153 ELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFD 212
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M K+ VSW ++SG DY EA M +G+ + V+ + SAC ++
Sbjct: 213 GMEVKNVVSWTTMISGCIAHQDYD-EAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVK 271
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC-EVTGDANKVFRRMHDRNVISWTTMI-SM 234
GK+IHG + + G+ + S + L++ Y +C E A +F R+V+ W+++I S
Sbjct: 272 HGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSF 331
Query: 235 NRE----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+R A+ LF +MR + + PN VT + +I A + + +K G +HG K F
Sbjct: 332 SRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSI 391
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
SV N LI MYA+ + S K+F E+ R+ ++W++LIS Y +G A+Q F+ + +
Sbjct: 392 SVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAYGLHGCGEQALQIFYEMNER 451
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD-PIV---GSALLDMYGKR 405
KP+A TF +VL+A A ++ GQR +V D + P+ + L+D+ G+
Sbjct: 452 GVKPDAITFLAVLSACNHAGLVA--EGQRIFK---QVRADCEIPLTIEHYACLVDLLGRS 506
Query: 406 GSI---FESQRVFNETQEKSEFAWTAIISALARHG 437
G + E +R + S W++++SA HG
Sbjct: 507 GKLEYALEIRRTM--PMKPSARIWSSLVSACKLHG 539
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 137/284 (48%), Gaps = 9/284 (3%)
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
+ LF E+ L G +I A S G +H L +KT SE V N +I
Sbjct: 34 QTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQLHCLALKTGSHSETVVSNSII 93
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAY 356
TMY +F + + +VFD + R+ I+WN+LI+GY NG A++A V + P
Sbjct: 94 TMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEALNDVYLLGLVPKPE 153
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHII---KVGLDSDPIVGSALLDMYGKRGSIFESQR 413
SV++ G + K G++ H+ ++ ++G + +AL+D Y + G + R
Sbjct: 154 LLASVVSMCG--RRMGSKIGRQIHALVVVNERIG--QSMFLSTALVDFYFRCGDSLMALR 209
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF+ + K+ +WT +IS H DY+ F+ M+ +GV P+ +T +++L+ C G
Sbjct: 210 VFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGF 269
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
+ G+ + + + E P S +V+M + G EL+
Sbjct: 270 VKHGKEIHGYAFR-HGFESCPSFSSALVNMYCQCGEPMHLAELI 312
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 223/690 (32%), Positives = 351/690 (50%), Gaps = 72/690 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPD--IVSWNTVLSGFE---KSDDALSFALRMNLIGVVF 55
++ Y G A+ + D + WN+++ + +++ LS M+ +
Sbjct: 66 ISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTP 125
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T+ C + G H+L G S V+VGNAL+ MYSR G L +AR+VF
Sbjct: 126 DNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVF 185
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-----GLRLDHVSFTSAASACG 170
DEMP D VSWN+I+ Y + G + +AL EM K G R D ++ + C
Sbjct: 186 DEMPVWDVVSWNSIIESYAKLG----KPKMAL-EMFSKMTNEFGFRPDDITLVNVLPPCA 240
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
LGKQ HG ++ ++ VGN L+ Y+K + +AN VF M ++V+SW
Sbjct: 241 SVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNA 300
Query: 231 MIS----MNR-EDAVSLFKEMRLD--------------------------GVC------- 252
M++ + R EDAV LF++M+ + GVC
Sbjct: 301 MVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 253 --PNDVTFIGLIHAISIGNLVKEGRMIHGLCIK-------TNFLSEPSVCNCLITMYARF 303
PN+VT I ++ + + G+ IH IK E V N LI MYA+
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKC 420
Query: 304 ESMQDSEKVFDELSCRE--IISWNALISGYAQNGLSLAAVQAFFGVIKE---SKPNAYTF 358
+ + + +FD LS +E +++W +I GY+Q+G + A++ + +E ++PNA+T
Sbjct: 421 KKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNE 417
L A + +S+ G++ H++ ++ ++ P+ V + L+DMY K G I +++ VF+
Sbjct: 481 SCALVACASLAALSI--GKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDN 538
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
EK+E WT++++ HG E + F+EM G + D +T L VL C +GMI +G
Sbjct: 539 MMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
F+ M D+ + P P+HY+C+VD+LGR GRL A L+ ++P P V +LL CR
Sbjct: 599 MEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCR 658
Query: 538 IHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGF 597
IHG VE+GE A + ++ GSY L+SN+YA G W+ V +R M+ KG++K G
Sbjct: 659 IHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGC 718
Query: 598 SWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
SW V I G F GD THP ++EIY++
Sbjct: 719 SW--VEGIKGTTTFFVGDKTHPHAKEIYQV 746
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 220/491 (44%), Gaps = 59/491 (12%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS--VSWNAILSGYTQD 136
+H ++ FG+ + + + + LI+ Y G L A + P D+ WN+++ Y +
Sbjct: 47 IHQKLLSFGILT-LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNN 105
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G + + + M D+ +F ACG ++ G H +S G+ ++V V
Sbjct: 106 GRAN-KCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFV 164
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLD-G 250
GN L++ YS+C DA KVF M +V+SW ++I + A+ +F +M + G
Sbjct: 165 GNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFG 224
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
P+D+T + ++ + G+ HG + + + V NCL+ MYA+F M ++
Sbjct: 225 FRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEAN 284
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAF-------------------------- 344
VF + ++++SWNA+++GY+Q G AV+ F
Sbjct: 285 TVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 345 -----FGVIKES-----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD----- 389
GV ++ KPN T SVL+ G A +L HG+ H + IK +D
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLS--GCASVGALMHGKEIHCYAIKYPMDLRKNG 402
Query: 390 --SDPIVGSALLDMYGKRGSIFESQRVFN--ETQEKSEFAWTAIISALARHGDYESVMNQ 445
+ +V + L+DMY K + ++ +F+ +E+ WT +I ++HGD +
Sbjct: 403 HGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALEL 462
Query: 446 FKEM--ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
EM E+ RP++ T L C + G+ + L++ +C++DM
Sbjct: 463 LSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDM 522
Query: 504 LGRVGRLEEAE 514
+ G + +A
Sbjct: 523 YAKCGDIGDAR 533
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 166/353 (47%), Gaps = 13/353 (3%)
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISWTT 230
K + K IH + G T +++ + L+STY A + RR D V W +
Sbjct: 39 KTISQVKLIHQKLLSFGILT-LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 231 MISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I +S F M P++ TF + A + V+ G H L T
Sbjct: 98 LIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTG 157
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F+S V N L+ MY+R S+ D+ KVFDE+ +++SWN++I YA+ G A++ F
Sbjct: 158 FMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFS 217
Query: 346 GVIKE--SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ E +P+ T +VL + SL G++ H + + + VG+ L+DMY
Sbjct: 218 KMTNEFGFRPDDITLVNVLPPCASVGTRSL--GKQFHGFAVTSEMIQNMFVGNCLVDMYA 275
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G + E+ VF+ K +W A+++ ++ G +E + F++M+ + ++ D +T+ +
Sbjct: 276 KFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSA 335
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
++ + G+ ++ + ML I+P+ ++ VG L +E+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKEI 387
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 208/623 (33%), Positives = 339/623 (54%), Gaps = 20/623 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y G A +F+ + D+VSWN+++S F + DDA L M GV + +
Sbjct: 121 YAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASL 180
Query: 61 STALSFC-LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ + C ++ EG FGL +H L++K GLDS V +GNAL+ MY ++G + + +VF+ MP
Sbjct: 181 VSVVPACGVEQEGG-FGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMP 239
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIE-MMRKGLRLDHVSFTSAASACGHEKNLELG 178
++ VSWN+ + + G YG +LAL M +G ++ +S A +LG
Sbjct: 240 ERNEVSWNSAIGCFLNAGLYG--DVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLG 297
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+++HG SIK + V N L+ Y+K A VF ++ RNV+SW MI+
Sbjct: 298 REVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQN 357
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+A L +M+ DG CPN +T + L+ A S +K G+ IH I+T + + +
Sbjct: 358 GAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFIS 417
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N LI MYA+ ++ ++ +FD LS ++ +S+N LI GY+Q+ S ++ F + S
Sbjct: 418 NALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTLILGYSQSPWSFESLNLFKQL--SSVG 474
Query: 354 NAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
Y S + A+ A ++S K G+ H +++ L + P + + LL +Y K G + +
Sbjct: 475 IEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTAS 534
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
++FN +EK +W +I HG ++ + F M++ GV D +++++VL+VC G
Sbjct: 535 KIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGG 594
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ +G+ F ML ++EP HY+CMVD+LGR G+L E+ E++ +P V +L
Sbjct: 595 LVERGKKYFSHMLAQ-NLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGAL 653
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
LGACRIHGN+E+ + AD L +++P SG Y ++ N+YAE G W +R MKS+ V+
Sbjct: 654 LGACRIHGNIELAQYAADHLFELKPEHSGYYSVLRNMYAEAGRWNEAHKIRTLMKSRKVQ 713
Query: 593 KEVGFSWADVGDIDGLHGFSSGD 615
K +SW G + L F GD
Sbjct: 714 KNPAYSWVQSG--NKLQAFLVGD 734
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 143/454 (31%), Positives = 244/454 (53%), Gaps = 17/454 (3%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
GL+LH+ ++ G ++V+ GN L+ Y+ G +ARRVFDEMP +D VSWN+++S +
Sbjct: 95 GLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLA 154
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+ + +A AL+ MMR G+ ++ S S ACG E+ G +HG+ +K G + V+
Sbjct: 155 NKMFD-DARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVN 213
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNR---EDAVSLFKEMRLDG 250
+GN L+ Y K + KVF M +RN +SW + I +N D ++LF+ M G
Sbjct: 214 LGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERG 273
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
P +T L+ A+ GR +HG IK + V N L+ MYA+F S++ +
Sbjct: 274 FMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKAC 333
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK----PNAYTFGSVLNAVG 366
VF+++ R ++SWNA+I+ QNG A +AF VIK K PN+ T ++L A
Sbjct: 334 AVFEKIEVRNVVSWNAMIANLVQNG---AESEAFGLVIKMQKDGECPNSITLVNLLPA-- 388
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
+ SLK G++ H+ I+ GL D + +AL+DMY K G + +Q +F + EK + ++
Sbjct: 389 CSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF-DLSEKDDVSY 447
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+I ++ +N FK++ + G+ D+I+F+ LT C +G+ + +++
Sbjct: 448 NTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVR 507
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ P + ++ + + G L+ A ++ +I
Sbjct: 508 RL-LSNHPFLANTLLGLYTKGGMLDTASKIFNRI 540
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/513 (23%), Positives = 261/513 (50%), Gaps = 30/513 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + ++ +F + + VSWN+ + F + D L+ M+ G + +
Sbjct: 219 VDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGS 278
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T S+ L ++ F G ++H +K ++ +++V N+L+ MY+++G L +A VF++
Sbjct: 279 ITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEK 338
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ VSWNA+++ Q+G EA +I+M + G + ++ + AC +L+
Sbjct: 339 IEVRNVVSWNAMIANLVQNGAES-EAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKT 397
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GKQIH SI+ G + + N L+ Y+KC A +F + +++ +S+ T+I
Sbjct: 398 GKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF-DLSEKDDVSYNTLILGYSQ 456
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S ++++LFK++ G+ + ++F+G + A + + K+G+ IHG+ ++ + P +
Sbjct: 457 SPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFL 516
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ +Y + + + K+F+ + +++ SWN +I GY +G + A F + K
Sbjct: 517 ANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHG----QIDAAFHLFDLMK 572
Query: 353 PNAYTFGSVLNAVGAAEDIS----LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ T+ V + + S ++ G++ SH++ L+ + + ++D+ G+ G +
Sbjct: 573 DHGVTYDHV-SYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQL 631
Query: 409 FES-QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
ES + + + + W A++ A HG+ E + Q+ ++P+ + SVL
Sbjct: 632 TESVEIILDMPFHANSDVWGALLGACRIHGNIE--LAQYAADHLFELKPEHSGYYSVL-- 687
Query: 468 CGRNGMIHKGR----HLFDSMLKDYHIEPSPDH 496
RN GR H +++K ++ +P +
Sbjct: 688 --RNMYAEAGRWNEAHKIRTLMKSRKVQKNPAY 718
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 188/389 (48%), Gaps = 21/389 (5%)
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK--QIHGVSIKMGYGTHVSVGN 198
EA+L M+R G+ D +F A A K ++H +++ G+ V GN
Sbjct: 56 TEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGN 115
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNR--EDAVSLFKEMRLDGVCP 253
L++ Y+ C GDA +VF M R+V+SW +++S N+ +DA M GV
Sbjct: 116 TLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPV 175
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
N + + ++ A + G +HGL +KT S ++ N L+ MY +F ++ S KVF
Sbjct: 176 NVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVF 235
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
+ + R +SWN+ I + GL + F G+ + P + T S+L A+ E
Sbjct: 236 EGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPAL--VELGY 293
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
G+ H + IK ++ D V ++L+DMY K GS+ ++ VF + + ++ +W A+I+
Sbjct: 294 FDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIAN 353
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF-----DSMLKD 487
L ++G +M+ G P+SIT +++L C R + G+ + ++ D
Sbjct: 354 LVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFD 413
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
I + ++DM + G+L A+ +
Sbjct: 414 LFIS------NALIDMYAKCGQLRLAQSI 436
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 189/567 (33%), Positives = 321/567 (56%), Gaps = 14/567 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ ++ GL ++ LI S +G + AR+VFD++P WNAI+ GY+++
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNN 98
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ +A+L +M + D +F ACG +L++G+ +H ++G+ V V
Sbjct: 99 HFQ-DALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157
Query: 198 NVLMSTYSKCEVTGDANKVFR--RMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDG 250
N L++ Y+KC G A VF + +R ++SWT ++S + +A+ +F +MR
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V P+ V + +++A + +++GR IH +K +EP + L TMYA+ + ++
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAK 277
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAE 369
+FD++ +I WNA+ISGYA+NG + A+ F +I K+ +P+ + S ++A A+
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISA--CAQ 335
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL+ + ++ + D + SAL+DM+ K GS+ ++ VF+ T ++ W+A+
Sbjct: 336 VGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAM 395
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I HG ++ ++ ME GV P+ +TFL +L C +GM+ +G F+ M D+
Sbjct: 396 IVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRM-ADHK 454
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I P HY+C++D+LGR G L++A E++ +P PG++V +LL AC+ H +VE+G+ A
Sbjct: 455 INPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAA 514
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
L ++P+ +G YV +SNLYA W+ VA +R MK KG+ K+VG SW +V L
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR--GRLE 572
Query: 610 GFSSGDNTHPRSEEIYRMAECLGSEMK 636
GF GD +HPR EEI R E + S +K
Sbjct: 573 GFRVGDKSHPRYEEIERQVEWIESRLK 599
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 178/359 (49%), Gaps = 15/359 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPD--IVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+Y K + A +F L P+ IVSW ++S + ++ + AL +M + V D
Sbjct: 163 LYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDC 222
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V + L+ + G +H+ ++K GL++E + +L TMY++ G++ A+ +FD+
Sbjct: 223 VALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + + + WNA++SGY ++G + +AI EM+ K +R D +S TSA SAC +LE
Sbjct: 283 MKSPNLILWNAMISGYAKNG-FAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
+ + + Y V + + L+ ++KC A VF R DR+V+ W+ MI
Sbjct: 342 ARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGL 401
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+SL++ M DGV PNDVTF+GL+ A + +V+EG +
Sbjct: 402 HGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQH 461
Query: 293 CNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISGYAQNG---LSLAAVQAFFGV 347
C+I + R + + +V + + + W AL+S ++ L A Q F +
Sbjct: 462 YACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSI 520
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 103/254 (40%), Gaps = 42/254 (16%)
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
++ H+ ++ +GL + + L+ G I +++VF++ F W AII +R+
Sbjct: 38 RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-----DYHIE 491
++ + + +M+ V PDS TF +L CG + GR + + + D ++
Sbjct: 98 NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157
Query: 492 -----------------------PSPDH----YSCMVDMLGRVGRLEEAEELVGQIPG-- 522
P P+ ++ +V + G EA E+ Q+
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217
Query: 523 -GPGLSVLQSLLGACRIHGNVEMGERIADALMKM----EPAGSGSYVLMSNLYAEKGDWE 577
P L S+L A ++E G I ++MKM EP + ++ +YA+ G
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEP---DLLISLNTMYAKCGQVA 274
Query: 578 MVAILRKGMKSKGV 591
IL MKS +
Sbjct: 275 TAKILFDKMKSPNL 288
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++M+ K G + A +F+ + D+V W+ ++ G+ ++ +A+S M GV +
Sbjct: 365 IDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPND 424
Query: 58 VTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT+ L C +H G + G + + ++ + +I + R G L +A V
Sbjct: 425 VTFLGLLIAC-NHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIK 483
Query: 117 EMPNKDSVS-WNAILSG-----YTQDGDYGVEAILAL 147
MP + V+ W A+LS + + G Y + + ++
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSI 520
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 223/664 (33%), Positives = 354/664 (53%), Gaps = 27/664 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNP----DIVSWNTVLSGFE-----KSDDALSFALRMNLIGVV 54
Y +SGQ A +F L++P D V+W ++ F ++ DA+S M GV
Sbjct: 76 YSRSGQLSAAHHLF--LSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVA 133
Query: 55 FDAVTYSTALSFCLDHEGFLFGL---QLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVE 110
D VT +T L+ G + LH +K GL S V V N L+ Y + G L
Sbjct: 134 PDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAA 193
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
ARRVF EMP++DSV++NA++ G +++G + EA+ M RKGL +F++ +
Sbjct: 194 ARRVFQEMPHRDSVTYNAMMMGCSKEGSHA-EALDLFAAMRRKGLAATRFTFSTVLTVAT 252
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+L LG+Q+HG+ + ++V V N L+ YSKC+ + K+F M +R+ +S+
Sbjct: 253 GVGDLCLGRQVHGL-VARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNV 311
Query: 231 MIS---MNREDAV--SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MI+ NR ++ LF+EM+ + + L+ + G+ IH +
Sbjct: 312 MIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLG 371
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
SE V N LI MY++ + ++ F + + +SW A+I+G QNG A+Q F
Sbjct: 372 LSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFC 431
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
G+ + P+ TF S + A I L G++ HS++I+ G S GSALLDMY K
Sbjct: 432 GMRRAGLSPDRATFSSTIKASSNLAMIGL--GRQLHSYLIRSGHMSSVFSGSALLDMYTK 489
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + E+ + F+E E++ +W A+ISA A +G ++ + F+ M G +PDS+TFLSV
Sbjct: 490 CGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSV 549
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L+ C NG+ + F+ M +Y I P +HYSC++D LGRVGR ++ +E++G++P
Sbjct: 550 LSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFED 609
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ S+L +CR HGN ++ A+ L M + YV++SN++A+ G WE A ++K
Sbjct: 610 DPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKK 669
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
M+ +G+RKE G+SW +V ++ FSS D T+P EI E L EM K +
Sbjct: 670 IMRDRGLRKETGYSWVEVK--HKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDT 727
Query: 645 AIAL 648
+ L
Sbjct: 728 SCTL 731
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 240/491 (48%), Gaps = 22/491 (4%)
Query: 46 LRMNLIGVVFDAVTYSTALSF-CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR 104
L ++ FD TY L L G L Q +L + + + N +++ YSR
Sbjct: 21 LDARMVKTGFDPATYRLNLLLHSLISSGRL--AQARALFDQMPHRNNAFSLNRMLSGYSR 78
Query: 105 WGRLVEARRVFDEMPN--KDSVSWNAILSGY-TQDGDYGVEAILALIEMMRKGLRLDHVS 161
G+L A +F P +D+V+W ++ + + G +A+ +M+R+G+ D V+
Sbjct: 79 SGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVT 138
Query: 162 FTSA---ASACGHEKNLELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVF 217
+ A G + +H ++K+G ++V V N L+ Y K + A +VF
Sbjct: 139 VATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVF 198
Query: 218 RRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIH-AISIGNLV 271
+ M R+ +++ M+ + +A+ LF MR G+ TF ++ A +G+L
Sbjct: 199 QEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLC 258
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
GR +HGL + S V N L+ Y++ + + + +K+F E+ R+ +S+N +I+GY
Sbjct: 259 L-GRQVHGLVARATS-SNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGY 316
Query: 332 AQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
A N + ++ F + S A + S+L+ G+ I + G++ H+ ++ +GL S
Sbjct: 317 AWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGI--GKQIHAQLVLLGLSS 374
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
+ +VG+AL+DMY K G + ++ F +K+ +WTA+I+ ++G E + F M
Sbjct: 375 EDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMR 434
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
G+ PD TF S + MI GR L +++ H+ S S ++DM + G L
Sbjct: 435 RAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMS-SVFSGSALLDMYTKCGCL 493
Query: 511 EEAEELVGQIP 521
+EA + ++P
Sbjct: 494 DEALQTFDEMP 504
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 147/282 (52%), Gaps = 11/282 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRM--NLIGVVFD-- 56
++ Y K D+ +F+ + D VS+N +++G+ + A S LR+ + + FD
Sbjct: 282 LDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCA-SIVLRLFREMQSLSFDRQ 340
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
A+ Y++ LS G Q+H+ +V GL SE VGNALI MYS+ G L A+ F
Sbjct: 341 ALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFI 400
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+K VSW A+++G Q+G EA+ M R GL D +F+S A + +
Sbjct: 401 NKNDKTGVSWTAMITGCVQNGQQE-EALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIG 459
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
LG+Q+H I+ G+ + V G+ L+ Y+KC +A + F M +RN ISW +IS
Sbjct: 460 LGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYA 519
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE 273
++A+ +F+ M G P+ VTF+ ++ A S L +E
Sbjct: 520 HYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEE 561
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 11/195 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G D A F N N+ VSW +++G ++ ++AL M G+ D
Sbjct: 383 IDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDR 442
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+S+ + + G QLHS +++ G S V+ G+AL+ MY++ G L EA + FDE
Sbjct: 443 ATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDE 502
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE----- 172
MP ++S+SWNA++S Y G AI M+ G + D V+F S SAC H
Sbjct: 503 MPERNSISWNAVISAYAHYGQ-AKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEE 561
Query: 173 --KNLELGKQIHGVS 185
K EL + +G+S
Sbjct: 562 CMKYFELMEYEYGIS 576
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K G D+AL F+ + + +SWN V+S + ++ +A+ M G D+
Sbjct: 484 LDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDS 543
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIV--KFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT+ + LS C H G + ++ ++G+ + +I R GR + + +
Sbjct: 544 VTFLSVLSAC-SHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEML 602
Query: 116 DEMP-NKDSVSWNAILSGYTQDGDYGVEAILA 146
EMP D + W++IL G+ + + A
Sbjct: 603 GEMPFEDDPIIWSSILHSCRTHGNQDLARVAA 634
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 309/582 (53%), Gaps = 13/582 (2%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D + L C FL G ++H +VK G +V+V NALI MYS G L AR +F
Sbjct: 123 DNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLF 182
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D++ NKD VSW+ ++ Y + G EA+ L +M ++ + S +L
Sbjct: 183 DKIENKDVVSWSTMIRSYDRSGLLD-EALDLLRDMHVMRVKPSEIGMISITHVLAELADL 241
Query: 176 ELGKQIHGVSIKMGY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+LGK +H ++ G + V + L+ Y KCE A +VF + ++ISWT MI+
Sbjct: 242 KLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIA 301
Query: 234 M-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
N + V LF +M +G+ PN++T + L+ ++ G+++H ++ F
Sbjct: 302 AYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTL 361
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ I MY + ++ + VFD ++++ W+A+IS YAQN A F +
Sbjct: 362 SLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMT 421
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+PN T S+L A SL+ G+ HS+I K G+ D I+ ++ +DMY G
Sbjct: 422 GCGIRPNERTMVSLLMICAKAG--SLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGD 479
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I + R+F E ++ W A+IS A HG E+ + F+EME GV P+ ITF+ L
Sbjct: 480 IDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHA 539
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C +G++ +G+ LF M+ ++ P +HY CMVD+LGR G L+EA EL+ +P P ++
Sbjct: 540 CSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIA 599
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V S L AC++H N+++GE A + +EP SG VLMSN+YA W VA +R+ MK
Sbjct: 600 VFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMK 659
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
+G+ KE G S +V + LH F GD HP ++++Y M +
Sbjct: 660 DEGIVKEPGVSSIEVNGL--LHEFIMGDREHPDAKKVYEMID 699
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 204/411 (49%), Gaps = 15/411 (3%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
+D+ S AC + LG+++HG +K G+ V V N L+ YS+ A +
Sbjct: 122 VDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLL 181
Query: 217 FRRMHDRNVISWTTMI-SMNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F ++ +++V+SW+TMI S +R ++A+ L ++M + V P+++ I + H ++ +
Sbjct: 182 FDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADL 241
Query: 272 KEGRMIHGLCIKTNFLSEPSV--CNCLITMYARFESMQDSEKVFDELSCREIISWNALIS 329
K G+ +H ++ + V C LI MY + E++ + +VFD LS IISW A+I+
Sbjct: 242 KLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIA 301
Query: 330 GYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
Y V+ F ++ E PN T S++ G A + L G+ H+ ++ G
Sbjct: 302 AYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALEL--GKLLHAFTLRNGF 359
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
++ +A +DMYGK G + ++ VF+ + K W+A+IS+ A++ + + F
Sbjct: 360 TLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVH 419
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG 508
M G+RP+ T +S+L +C + G + G+ + S + I+ + VDM G
Sbjct: 420 MTGCGIRPNERTMVSLLMICAKAGSLEMGKWI-HSYIDKQGIKGDMILKTSFVDMYANCG 478
Query: 509 RLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
++ A L + +S+ +++ +HG+ GE + +ME G
Sbjct: 479 DIDTAHRLFAE-ATDRDISMWNAMISGFAMHGH---GEAALELFEEMEALG 525
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 213/468 (45%), Gaps = 27/468 (5%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
MY + G A +F+ + N D+VSW+T++ +++S D+AL M+++ V +
Sbjct: 168 MYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIG 227
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGL--DSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + G +H+ +++ G S V + ALI MY + L ARRVFD
Sbjct: 228 MISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDG 287
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +SW A+++ Y + E + ++M+ +G+ + ++ S CG LEL
Sbjct: 288 LSKASIISWTAMIAAYIHCNNLN-EGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALEL 346
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GK +H +++ G+ + + + Y KC A VF ++++ W+ MIS +
Sbjct: 347 GKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQ 406
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A +F M G+ PN+ T + L+ + ++ G+ IH K + +
Sbjct: 407 NNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMIL 466
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGV 347
+ MYA + + ++F E + R+I WNA+ISG+A +G AA++ F GV
Sbjct: 467 KTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGV 526
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRG 406
PN TF L+A + L+ G+R H + + G ++D+ G+ G
Sbjct: 527 ----TPNDITFIGALHA--CSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAG 580
Query: 407 SIFESQRVFNETQEKSEFA-WTAIISALARHGDY---ESVMNQFKEME 450
+ E+ + + A + + ++A H + E QF +E
Sbjct: 581 LLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLE 628
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 156/332 (46%), Gaps = 10/332 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K A +F+ L+ I+SW +++ + ++ + ++M G+ +
Sbjct: 269 IDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNE 328
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T + + C G LH+ ++ G + + A I MY + G + AR VFD
Sbjct: 329 ITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDS 388
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+KD + W+A++S Y Q+ EA + M G+R + + S C +LE+
Sbjct: 389 FKSKDLMMWSAMISSYAQNNCID-EAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEM 447
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK IH K G + + + Y+ C A+++F DR++ W MIS
Sbjct: 448 GKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAM 507
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEPS 291
+ E A+ LF+EM GV PND+TFIG +HA S L++EG R+ H + + F +
Sbjct: 508 HGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVE 567
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIIS 323
C++ + R + ++ ++ + R I+
Sbjct: 568 HYGCMVDLLGRAGLLDEAHELIKSMPMRPNIA 599
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 223/713 (31%), Positives = 345/713 (48%), Gaps = 72/713 (10%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y G D AL + + V WN ++ K D A++ + RM G D T
Sbjct: 106 YLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTL 165
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
L C + + G H LI G +S V++ NAL+ MYSR G L EA +FDE+
Sbjct: 166 PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 225
Query: 121 K---DSVSWNAILSGYTQDGDYGV-----EAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+ D +SWN+I+S + + + + ++ R D +S + ACG
Sbjct: 226 RGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL 285
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
K + K++HG +I+ G V VGN L+ Y+KC + +A KVF M ++V+SW M+
Sbjct: 286 KAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 345
Query: 233 S-----------------MNRE-----------------------DAVSLFKEMRLDGVC 252
+ M +E +A++LF++M G
Sbjct: 346 AGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSL 405
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS----------EPSVCNCLITMYAR 302
PN VT I ++ A + +G IH +K L+ + V N LI MY++
Sbjct: 406 PNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 465
Query: 303 FESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKES---KPNAYT 357
S + + +FD++ R +++W +I G+AQ G S A++ F +I E PNAYT
Sbjct: 466 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 525
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGL--DSDPIVGSALLDMYGKRGSIFESQRVF 415
+L A A +++ G++ H+++++ S V + L+DMY K G + ++ VF
Sbjct: 526 ISCILMA--CAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVF 583
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ +KS +WT++++ HG ++ F +M G PD ITFL VL C GM+
Sbjct: 584 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 643
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
+G FDSM DY + P +HY+C +D+L R GRL++A V +P P V +LL A
Sbjct: 644 QGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 703
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
CR+H NVE+ E + L++M GSY L+SN+YA G W+ VA +R MK G++K
Sbjct: 704 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 763
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
G SW V G F GD +HP S +IY + E L +K + E AL
Sbjct: 764 GCSW--VQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFAL 814
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 154/333 (46%), Gaps = 60/333 (18%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----------------------- 37
++ Y K G + A+ +FN + D+VSWN +++G+ +
Sbjct: 314 IDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDV 373
Query: 38 ---------------SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSL 82
S +AL+ +M G + + VT + LS C F G ++H+
Sbjct: 374 VTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAY 433
Query: 83 IVKF----------GLDSEVYVGNALITMYSRWGRLVEARRVFDEMP--NKDSVSWNAIL 130
+K G D ++ V NALI MYS+ AR +FD++P ++ V+W ++
Sbjct: 434 SLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMI 493
Query: 131 SGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
G+ Q GD +A+ +EM+ + G+ + + + AC H + +GKQIH ++
Sbjct: 494 GGHAQYGDSN-DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRH 552
Query: 189 GY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVS 241
+ V N L+ YSKC A VF M ++ ISWT+M++ +A+
Sbjct: 553 HRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALD 612
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+F +MR G P+D+TF+ +++A S +V +G
Sbjct: 613 IFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 645
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 151/306 (49%), Gaps = 17/306 (5%)
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----SMNRED-AVSLFKEMRLD 249
S+G ++++Y C T A V R+ + W +I R D A+++ M
Sbjct: 97 SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 156
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
G P+ T ++ A + G HGL F S +CN L+ MY+R S++++
Sbjct: 157 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 216
Query: 310 EKVFDELSCR---EIISWNALISGYAQNGLSLAAVQAF--FGVIKESKP-----NAYTFG 359
+FDE++ R ++ISWN+++S + ++ + A+ F +I KP + +
Sbjct: 217 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 276
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
++L A G+ + ++ + H + I+ G D VG+AL+D Y K G + + +VFN +
Sbjct: 277 NILPACGSLK--AVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 334
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
K +W A+++ ++ G++E+ FK M + + D +T+ +V+ + G H+ +
Sbjct: 335 FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 394
Query: 480 LFDSML 485
LF M+
Sbjct: 395 LFRQMI 400
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K G D A +F++++ +SW ++++G+ + +AL +M G V D
Sbjct: 567 IDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDD 626
Query: 58 VTYSTALSFCLDHEGFL-FGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T+ L C H G + GL S+ +GL I + +R GRL +A R
Sbjct: 627 ITFLVVLYAC-SHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTV 685
Query: 116 DEMP-NKDSVSWNAILSG 132
+MP +V W A+LS
Sbjct: 686 KDMPMEPTAVVWVALLSA 703
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 223/713 (31%), Positives = 345/713 (48%), Gaps = 72/713 (10%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y G D AL + + V WN ++ K D A++ + RM G D T
Sbjct: 99 YLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTL 158
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
L C + + G H LI G +S V++ NAL+ MYSR G L EA +FDE+
Sbjct: 159 PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 218
Query: 121 K---DSVSWNAILSGYTQDGDYGV-----EAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+ D +SWN+I+S + + + + ++ R D +S + ACG
Sbjct: 219 RGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL 278
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
K + K++HG +I+ G V VGN L+ Y+KC + +A KVF M ++V+SW M+
Sbjct: 279 KAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 338
Query: 233 S-----------------MNRE-----------------------DAVSLFKEMRLDGVC 252
+ M +E +A++LF++M G
Sbjct: 339 AGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSL 398
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS----------EPSVCNCLITMYAR 302
PN VT I ++ A + +G IH +K L+ + V N LI MY++
Sbjct: 399 PNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 458
Query: 303 FESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKES---KPNAYT 357
S + + +FD++ R +++W +I G+AQ G S A++ F +I E PNAYT
Sbjct: 459 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 518
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGL--DSDPIVGSALLDMYGKRGSIFESQRVF 415
+L A A +++ G++ H+++++ S V + L+DMY K G + ++ VF
Sbjct: 519 ISCILMA--CAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVF 576
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ +KS +WT++++ HG ++ F +M G PD ITFL VL C GM+
Sbjct: 577 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 636
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
+G FDSM DY + P +HY+C +D+L R GRL++A V +P P V +LL A
Sbjct: 637 QGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 696
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
CR+H NVE+ E + L++M GSY L+SN+YA G W+ VA +R MK G++K
Sbjct: 697 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 756
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
G SW V G F GD +HP S +IY + E L +K + E AL
Sbjct: 757 GCSW--VQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFAL 807
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 154/333 (46%), Gaps = 60/333 (18%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----------------------- 37
++ Y K G + A+ +FN + D+VSWN +++G+ +
Sbjct: 307 IDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDV 366
Query: 38 ---------------SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSL 82
S +AL+ +M G + + VT + LS C F G ++H+
Sbjct: 367 VTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAY 426
Query: 83 IVKF----------GLDSEVYVGNALITMYSRWGRLVEARRVFDEMP--NKDSVSWNAIL 130
+K G D ++ V NALI MYS+ AR +FD++P ++ V+W ++
Sbjct: 427 SLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMI 486
Query: 131 SGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
G+ Q GD +A+ +EM+ + G+ + + + AC H + +GKQIH ++
Sbjct: 487 GGHAQYGDSN-DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRH 545
Query: 189 GY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVS 241
+ V N L+ YSKC A VF M ++ ISWT+M++ +A+
Sbjct: 546 HRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALD 605
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+F +MR G P+D+TF+ +++A S +V +G
Sbjct: 606 IFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 638
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 151/306 (49%), Gaps = 17/306 (5%)
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----SMNRED-AVSLFKEMRLD 249
S+G ++++Y C T A V R+ + W +I R D A+++ M
Sbjct: 90 SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 149
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
G P+ T ++ A + G HGL F S +CN L+ MY+R S++++
Sbjct: 150 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 209
Query: 310 EKVFDELSCR---EIISWNALISGYAQNGLSLAAVQAF--FGVIKESKP-----NAYTFG 359
+FDE++ R ++ISWN+++S + ++ + A+ F +I KP + +
Sbjct: 210 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 269
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
++L A G+ + ++ + H + I+ G D VG+AL+D Y K G + + +VFN +
Sbjct: 270 NILPACGSLK--AVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 327
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
K +W A+++ ++ G++E+ FK M + + D +T+ +V+ + G H+ +
Sbjct: 328 FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 387
Query: 480 LFDSML 485
LF M+
Sbjct: 388 LFRQMI 393
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K G D A +F++++ +SW ++++G+ + +AL +M G V D
Sbjct: 560 IDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDD 619
Query: 58 VTYSTALSFCLDHEGFL-FGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T+ L C H G + GL S+ +GL I + +R GRL +A R
Sbjct: 620 ITFLVVLYAC-SHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTV 678
Query: 116 DEMP-NKDSVSWNAILSG 132
+MP +V W A+LS
Sbjct: 679 KDMPMEPTAVVWVALLSA 696
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 210/616 (34%), Positives = 331/616 (53%), Gaps = 22/616 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGV--VFDAV 58
Y G A +F+ + ++S+N V+ + + DA++ +RM G+ V D
Sbjct: 59 YALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGY 118
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVK--FGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
TY + + GL +H I++ FG+D YV NAL+ MY +GR+ AR VFD
Sbjct: 119 TYPFVAKAAGELKSISLGLVIHGRILRSWFGMDK--YVQNALLAMYMNFGRVEMARNVFD 176
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M N+D +SWN ++SGY ++G Y +A++ M+ +G+ DH + S CGH K LE
Sbjct: 177 VMKNRDVISWNTMISGYYRNG-YMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLE 235
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
+G+ +H + + G + V N L++ Y KC +A VF RM R+VI+WT MI+
Sbjct: 236 MGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYI 295
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
ED A+ L + M+ +GV PN VT L+ A + +G+ +HG I+ S+
Sbjct: 296 EDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDII 355
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ LI+MYA+ + + +VF S W+A+I+G QN L A+ F + +E
Sbjct: 356 IETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRRED 415
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+PN T S+L A D L+ H ++ K G S + L+ +Y K G++
Sbjct: 416 VEPNIATLNSLLPAYATLAD--LRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLES 473
Query: 411 SQRVFNETQEKSE----FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ ++FN QEK + W A+IS HGD + + F EM GV P+ ITF S L
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALN 533
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G++ +G LF ML+ Y +HY+C+VD+LGR GRL+EA L+ IP P
Sbjct: 534 ACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTS 593
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
++ +LL AC H NV++GE A+ L ++EP +G+YVL++N+YA G W+ + +R M
Sbjct: 594 TIWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMM 653
Query: 587 KSKGVRKEVGFSWADV 602
++ G+RK+ G S ++
Sbjct: 654 ENVGLRKKPGHSTIEI 669
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 254/526 (48%), Gaps = 50/526 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY G+ + A +F+ + N D++SWNT++SG+ ++ +DAL M GV D
Sbjct: 159 LAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDH 218
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C +G G +H L+ + L ++ V NAL+ MY + GR+ EAR VF
Sbjct: 219 ATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGR 278
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M +D ++W +++GY +DGD VE L L +M+ +G+R + V+ S SACG L
Sbjct: 279 MERRDVITWTCMINGYIEDGD--VENALELCRLMQFEGVRPNAVTIASLVSACGDALKLN 336
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--M 234
GK +HG +I+ + + + L+S Y+KC+ +VF + W+ +I+ +
Sbjct: 337 DGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCV 396
Query: 235 NRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E DA+ LFK MR + V PN T L+ A + +++ IH KT F+S
Sbjct: 397 QNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLD 456
Query: 292 VCNCLITMYARFESMQDSEKVFDELS----CREIISWNALISGYAQNGLSLAAVQAFFGV 347
L+ +Y++ +++ + K+F+ + ++++ W ALISGY +G A+Q F +
Sbjct: 457 AATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM 516
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV------------ 394
++ PN TF S LNA HS +++ GL +
Sbjct: 517 VRSGVTPNEITFTSALNACS-------------HSGLVEEGLTLFSFMLEHYKTLARSNH 563
Query: 395 GSALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDY---ESVMNQFKEME 450
+ ++D+ G+ G + E+ + E + W A+++A H + E N+ E+E
Sbjct: 564 YTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELE 623
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
+ + + ++ GR + K R +M+++ + P H
Sbjct: 624 PENT-GNYVLLANIYAALGRWKDMEKVR----NMMENVGLRKKPGH 664
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 213/442 (48%), Gaps = 24/442 (5%)
Query: 93 YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR 152
++ + L Y+ G + AR++FDEMP +S+N ++ Y +DG Y +AI I M+
Sbjct: 50 HILSTLSVTYALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYH-DAINVFIRMVS 108
Query: 153 KGLRL--DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
+G++ D ++ A A G K++ LG IHG ++ +G V N L++ Y
Sbjct: 109 EGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRV 168
Query: 211 GDANKVFRRMHDRNVISWTTMIS-------MNREDAVSLFKEMRLDGVCPNDVTFIGLIH 263
A VF M +R+VISW TMIS MN DA+ +F M +GV P+ T + ++
Sbjct: 169 EMARNVFDVMKNRDVISWNTMISGYYRNGYMN--DALMMFDWMVNEGVDPDHATIVSMLP 226
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
++ GR +H L + + V N L+ MY + M ++ VF + R++I+
Sbjct: 227 VCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVIT 286
Query: 324 WNALISGY-----AQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQR 378
W +I+GY +N L L + F GV +PNA T S+++A G A + L G+
Sbjct: 287 WTCMINGYIEDGDVENALELCRLMQFEGV----RPNAVTIASLVSACGDA--LKLNDGKC 340
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H I+ + SD I+ ++L+ MY K I RVF+ W+AII+ ++
Sbjct: 341 LHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNEL 400
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS 498
++ FK M + V P+ T S+L + + ++ + K + S D +
Sbjct: 401 VRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMS-SLDAAT 459
Query: 499 CMVDMLGRVGRLEEAEELVGQI 520
+V + + G LE A ++ I
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGI 481
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 215/663 (32%), Positives = 362/663 (54%), Gaps = 25/663 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN-PDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
+ MY K G + A +F+ + D+VSW + S ++ ++L M +G+ +
Sbjct: 83 LTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPN 142
Query: 57 AVTYSTALSFCLDHEGF-LFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRV 114
A T A C E F L G + ++K G ++V VG ALI M++R G LV A+RV
Sbjct: 143 AFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRV 202
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD + + SV W +++ Y Q G + + + M+ G D S +S SAC +
Sbjct: 203 FDGLIERTSVVWTLLITRYVQAG-CASKVVELFLHMLDDGFEPDGYSMSSMISACTELGS 261
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD---ANKVFRRMHDRNVISWTTM 231
+ LG+Q+H V++++G + V L+ Y+K ++ A KVF+ M NV+SWT +
Sbjct: 262 VRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTAL 321
Query: 232 IS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
IS + + ++LF+EM + + PN +T+ L+ A + + GR IH +KT+
Sbjct: 322 ISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTS 381
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
V N L++MYA M+++ K FD+L I+S + + N + ++
Sbjct: 382 IAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGM- 440
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ + +TF S+L+A AA L GQ+ H+ +K G SD + ++L+ MY +
Sbjct: 441 ----DDGVSTFTFASLLSA--AASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARC 494
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++ R F+E ++ + +WT+IIS LA+HG + ++ F +M GV+P+ +T+++VL
Sbjct: 495 GYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVL 554
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ +G+ F SM KD+ + P +HY+C+VD+L R G +EEA + + ++P
Sbjct: 555 SACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKAD 614
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
V ++LL ACR +GN E+GE A+ ++ +EP YVL+SNLYA+ G W+ VA +R
Sbjct: 615 ALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSL 674
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
M+ K + KE G SW DVG+ +H F +GD +HP + +IY L E+K + + +
Sbjct: 675 MRDKNLSKETGLSWMDVGNT--IHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTS 732
Query: 646 IAL 648
I L
Sbjct: 733 IVL 735
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 237/458 (51%), Gaps = 34/458 (7%)
Query: 75 FGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFDEMPN-KDSVSWNAILSG 132
G LH +++ LD++ V N+L+TMYS+ G + ARRVFD+M +D VSW A+ S
Sbjct: 58 LGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASC 117
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL-GKQIHGVSIKMGY- 190
++G E++ L EM+ GLR + + +AA AC ++ L G + G +K G+
Sbjct: 118 LARNGAER-ESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFW 176
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKE 245
GT VSVG L+ +++ A +VF + +R + WT +I+ + V LF
Sbjct: 177 GTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLH 236
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE- 304
M DG P+ + +I A + V+ G+ +H + ++ +S+ V L+ MYA+ +
Sbjct: 237 MLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKM 296
Query: 305 --SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKES-KPNAYTFGS 360
SM+ + KVF + ++SW ALISGY Q+G+ V A F ++ ES +PN T+ +
Sbjct: 297 ERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSN 356
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
+L A D G++ H+H++K + +VG+AL+ MY + G + E+++ F++ E
Sbjct: 357 LLKACANLSD--QDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYE 414
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+ + + + + S ++ + M++ GV + TF S+L+ G++ KG+ L
Sbjct: 415 TNILSMSPDVET---ERNNASCSSKIEGMDD-GV--STFTFASLLSAAASVGLLTKGQKL 468
Query: 481 FDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+K D I S +V M R G LE+A
Sbjct: 469 HALSMKAGFRSDQGISNS------LVSMYARCGYLEDA 500
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 216/663 (32%), Positives = 362/663 (54%), Gaps = 29/663 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN-PDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
+ +Y + G A +F+ + DIVSW + S ++ +L M G++ +
Sbjct: 91 LTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEMLESGLLPN 150
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIV-KFGL-DSEVYVGNALITMYSRWGRLVEARRV 114
A T A C HE + + +V K GL ++V VG+ALI M +R G L AR+V
Sbjct: 151 AYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLARNGDLASARKV 210
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD + K V W ++S Y Q G+ EA+ ++ + G D + +S SAC +
Sbjct: 211 FDGLIEKTVVVWTLLISRYVQ-GECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGS 269
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD---ANKVFRRMHDRNVISWTTM 231
+ LG Q+H ++++MG + V L+ Y+K + ANKVF RM +VISWT +
Sbjct: 270 VRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTAL 329
Query: 232 IS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
IS + ++LF EM + + PN +T+ ++ + + + GR +H IK+N
Sbjct: 330 ISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSN 389
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
S +V N L++MYA M+++ +VF++L R +I I+ L V+
Sbjct: 390 QASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIP---CITEGRDFPLDHRIVRMDV 446
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
G+ ++ TF S+++A AA L GQ+ H+ +K G SD V ++L+ MY +
Sbjct: 447 GI------SSSTFASLISA--AASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRC 498
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++ R FNE ++++ +WT++IS LA+HG E ++ F +M GV+P+ +T+++VL
Sbjct: 499 GYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVL 558
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ +G+ F SM +D+ + P +HY+CMVD+L R G ++EA E + ++P
Sbjct: 559 SACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKAD 618
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
V ++LLGACR H N+E+GE A ++++EP YVL+SNLYA+ G W+ VA +R
Sbjct: 619 ALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSA 678
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
M+ + KE G SW +V + H F +GD +HPR+++IY + L ++K + + +
Sbjct: 679 MRDNNLNKETGLSWMEVENTT--HEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTS 736
Query: 646 IAL 648
I L
Sbjct: 737 IVL 739
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 152/463 (32%), Positives = 240/463 (51%), Gaps = 48/463 (10%)
Query: 75 FGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFDEMPN-KDSVSWNAILSG 132
G LH +++ L D + V N+L+T+YSR G + AR VFD M +D VSW A+ S
Sbjct: 66 LGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASC 125
Query: 133 YTQDG-DYGVEAILALIEMMRKGLRLDHVSFTSAASAC-GHEKNLELGKQIHGVSIKMG- 189
++G + G ++L + EM+ GL + + +AA AC HE +G + G+ KMG
Sbjct: 126 LARNGAERG--SLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFK 244
+GT V+VG+ L+ ++ A KVF + ++ V+ WT +IS E+AV LF
Sbjct: 184 WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFL 243
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF- 303
+ DG P+ T +I A + V+ G +H L ++ S+ V L+ MYA+
Sbjct: 244 DFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSN 303
Query: 304 --ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKES-KPNAYTFG 359
++M + KVF+ + ++ISW ALISGY Q+G+ V A FG ++ ES KPN T+
Sbjct: 304 IGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYS 363
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
S+L + + D G++ H+H+IK S VG+AL+ MY + G + E++RVFN+
Sbjct: 364 SILKSCASISD--HDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLY 421
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD----SITFLSVLTVCGRNGMIH 475
E+S +I + D+ ++++ VR D S TF S+++ GM+
Sbjct: 422 ERS------MIPCITEGRDF--------PLDHRIVRMDVGISSSTFASLISAAASVGMLT 467
Query: 476 KGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEA 513
KG+ L LK D + S +V M R G LE+A
Sbjct: 468 KGQQLHAMSLKAGFGSDRFVSNS------LVSMYSRCGYLEDA 504
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 204/647 (31%), Positives = 359/647 (55%), Gaps = 18/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+ MY + D A +F+ + + VSW +V++ ++ DAL M G D
Sbjct: 93 ITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQ 152
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+A+ C + G Q+H+ +K S++ V NAL+TMYS+ G + + +F+
Sbjct: 153 FALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFER 212
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNLE 176
+ +KD +SW +I++G+ Q G + +EA+ +M+ +G + F SA ACG + E
Sbjct: 213 IKDKDLISWGSIIAGFAQQG-FEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWE 271
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+QIHG+SIK + VG L Y++ + A F R+ +++SW ++++
Sbjct: 272 YGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYS 331
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+A+ LF EMR G+ P+ +T GL+ A + + GR+IH +K + S
Sbjct: 332 VEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVS 391
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VCN L++MYAR + + VF E+ +++++WN++++ AQ+ V F ++ +S
Sbjct: 392 VCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHP-EEVLKLFSLLNKS 450
Query: 352 KP--NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+P + + +VL+A +AE + ++ H++ K GL D ++ + L+D Y K GS+
Sbjct: 451 EPSLDRISLNNVLSA--SAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLD 508
Query: 410 ESQRVFNET-QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ R+F + F+W+++I A+ G + ++ F M + G+RP+ +TF+ VLT C
Sbjct: 509 DAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTAC 568
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
R G +++G + + M +Y I P+ +H SC+VD+L R G+L EA + Q+P P + +
Sbjct: 569 SRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIM 628
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
++LL A ++H ++EMG+R A+ ++ ++P+ S +YVL+ N+YA G+W A L+K M++
Sbjct: 629 WKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRT 688
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
GV+K G SW + L F D +HP SEEIY M E +G EM
Sbjct: 689 SGVKKSPGKSWVKLK--GELKVFIVEDRSHPESEEIYAMLELIGMEM 733
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 224/435 (51%), Gaps = 21/435 (4%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+GN LITMY R AR+VFDEMP ++ VSW ++++ + Q+G G +A+ M+R
Sbjct: 88 LGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAG-DALGLFSSMLRS 146
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G D + SA AC ++ G+Q+H ++K G+ + V N L++ YSK + D
Sbjct: 147 GTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDG 206
Query: 214 NKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGV-CPNDVTFIGLIHAISI 267
+F R+ D+++ISW ++I+ + +A+ +F++M ++G PN+ F A
Sbjct: 207 FMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGA 266
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
+ G IHGL IK + V L MYARF+++ + F + +++SWN++
Sbjct: 267 VGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSI 326
Query: 328 ISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
++ Y+ GL L+ F +++S +P+ T +L A + +L HG+ HS+++K
Sbjct: 327 VNAYSVEGL-LSEALVLFSEMRDSGLRPDGITVRGLLCACVGRD--ALYHGRLIHSYLVK 383
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
+GLD D V ++LL MY + + + VF+E +++ W +I++A A+H E V+
Sbjct: 384 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKL 443
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL----FDSMLKDYHIEPSPDHYSCMV 501
F + D I+ +VL+ G + + F + L D + + ++
Sbjct: 444 FSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLS-----NTLI 498
Query: 502 DMLGRVGRLEEAEEL 516
D + G L++A L
Sbjct: 499 DTYAKCGSLDDAMRL 513
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 211/441 (47%), Gaps = 37/441 (8%)
Query: 151 MRKGLRLD-HVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
+ +G R+ H+ +S++S Q+ G ++ +GN L++ Y +C
Sbjct: 60 LPQGRRVHRHLVASSSSSP---------DAQLAGNTV---------LGNHLITMYGRCAA 101
Query: 210 TGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHA 264
A +VF M RN +SW ++I+ + + DA+ LF M G + + A
Sbjct: 102 PDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRA 161
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+ V GR +H +K+ S+ V N L+TMY++ + D +F+ + +++ISW
Sbjct: 162 CTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISW 221
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
++I+G+AQ G + A+Q F +I E PN + FGS A GA S ++G++ H
Sbjct: 222 GSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVG--SWEYGEQIHGL 279
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
IK LD D VG +L DMY + ++ ++ F + +W +I++A + G
Sbjct: 280 SIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEA 339
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVC-GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+ F EM + G+RPD IT +L C GR+ + H GR L S L ++ + ++
Sbjct: 340 LVLFSEMRDSGLRPDGITVRGLLCACVGRDALYH-GR-LIHSYLVKLGLDGDVSVCNSLL 397
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG 561
M R L A ++ +I + S+L AC H + E ++ L K EP S
Sbjct: 398 SMYARCSDLSSAMDVFHEIK-DQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP--SL 454
Query: 562 SYVLMSNLY---AEKGDWEMV 579
+ ++N+ AE G +EMV
Sbjct: 455 DRISLNNVLSASAELGYFEMV 475
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 212/657 (32%), Positives = 364/657 (55%), Gaps = 36/657 (5%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDAL--------SFALRMNLIG 52
+ + G D+A IF NL + V+ N ++ G K S++A+ SF + +
Sbjct: 315 FARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFV 374
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEA 111
V+ AV F + +G + G ++H I++ GL D ++ + N L+ MY++ G + +A
Sbjct: 375 VLLSAVA-----EFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKA 429
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACG 170
RVF + +D VSWN I+S Q+G E + MMR+G + + + S S+C
Sbjct: 430 SRVFRLLCARDRVSWNTIISVLDQNG--FCEGAMMNYCMMRQGCISPSNFAAISGLSSCA 487
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ L G+Q+H ++K G SV N L+ Y C ++ ++F M + +++SW +
Sbjct: 488 SLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNS 547
Query: 231 MISM------NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
++ + ++V +F M G+ PN VTF+ L+ A+S ++++ G+ +H + +K
Sbjct: 548 IMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKH 607
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQA 343
+ + +V N L++ YA+ M E++F +S R + +SWN++ISGY NG +
Sbjct: 608 GAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDC 667
Query: 344 FFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
+ ++ ++ + TF VLNA + +L+ G H+ I+ L+SD +V SALLDMY
Sbjct: 668 VWLMMHSNQMLDCCTFSIVLNACASVA--ALERGMEMHAFGIRSQLESDVVVESALLDMY 725
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K G I + +VFN +K+EF+W ++IS ARHG E + F+EM+ G PD +TF+
Sbjct: 726 SKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFV 785
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
SVL+ C G++ +G F+ M++D+ I P +HYSC++D+LGR G+L + +E + ++P
Sbjct: 786 SVLSACSHAGLVDRGLDYFE-MMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPM 844
Query: 523 GPGLSVLQSLLGACRIHGN---VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
P + +++L ACR + +++G+ + L+++EP +YVL SN YA G WE
Sbjct: 845 KPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDT 904
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
A R M ++KE G SW +G DG+H F +GD +HP ++EIY L ++K
Sbjct: 905 AKARAAMGGAAMKKEAGQSWVTLG--DGVHTFIAGDRSHPNTKEIYEKLNFLIQKIK 959
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 143/548 (26%), Positives = 261/548 (47%), Gaps = 30/548 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD- 56
+N+Y K + A +F+ + + VSW ++SG+ S D+A M G F
Sbjct: 98 VNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSR 157
Query: 57 --AVTYSTALSFCLD--HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW--GRLVE 110
T+ + L C D + F +Q+H L+ K S V NALI+MY G ++
Sbjct: 158 PTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQ 217
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG----LRLDHVSFTSAA 166
A++VFD P +D ++WNA++S Y + G Y V + M+ LR + +F S
Sbjct: 218 AQQVFDTTPVRDLITWNALMSVYAKKG-YVVSTFTLFMAMLHDDSAIELRPNEHTFGSLI 276
Query: 167 SACGHEK-NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
+A + + Q+ +K G + + VG+ L+S +++ + +A +F + +RN
Sbjct: 277 TATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNA 336
Query: 226 ISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE----GRM 276
++ +I E+AV +F R D N TF+ L+ A++ ++ ++ GR
Sbjct: 337 VTLNGLIVGLVKQHCSEEAVGIFMGTR-DSFVVNTDTFVVLLSAVAEFSIPEDGLMRGRE 395
Query: 277 IHGLCIKTNFLS-EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
+HG ++T + + ++ N L+ MYA+ ++ + +VF L R+ +SWN +IS QNG
Sbjct: 396 VHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNG 455
Query: 336 LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A+ + ++++ + F ++ A L GQ+ H +K GLD D V
Sbjct: 456 FCEGAMMN-YCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVS 514
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL-ARHGDYESVMNQFKEMENKGV 454
+AL+ MYG G+ ES +FN E +W +I+ + + H + F M G+
Sbjct: 515 NALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGL 574
Query: 455 RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
P+ +TF+++L+ ++ G+ + +LK IE + + M + G ++ E
Sbjct: 575 TPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALM-SCYAKSGDMDSCE 633
Query: 515 ELVGQIPG 522
+L + G
Sbjct: 634 QLFSSMSG 641
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 216/459 (47%), Gaps = 22/459 (4%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
+LH +VK GL ++++ N L+ +Y++ RL AR+VFD M +++VSW ++SGY G
Sbjct: 77 RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136
Query: 138 --DYGVEAILALIEMMRKGLRLDHVSFTSAASAC--GHEKNLELGKQIHGVSIKMGYGTH 193
D A++ + R +F S AC L Q+HG+ K Y ++
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196
Query: 194 VSVGNVLMSTYSKCEV--TGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEM 246
+V N L+S Y C V A +VF R++I+W ++S+ + +LF M
Sbjct: 197 TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAM 256
Query: 247 RLDGVC----PNDVTFIGLIHAISIGNLVKEGRM--IHGLCIKTNFLSEPSVCNCLITMY 300
D PN+ TF LI A S+ + G + + +K+ S+ V + L++ +
Sbjct: 257 LHDDSAIELRPNEHTFGSLITATSLSS-CSSGVLDQVFARVLKSGSSSDLYVGSALVSAF 315
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
AR + +++ +F L R ++ N LI G + S AV F G N TF
Sbjct: 316 ARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFVV 375
Query: 361 VLNAVG--AAEDISLKHGQRCHSHIIKVGL-DSDPIVGSALLDMYGKRGSIFESQRVFNE 417
+L+AV + + L G+ H HI++ GL D + + L++MY K G+I ++ RVF
Sbjct: 376 LLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRL 435
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
+ +W IIS L ++G E M + M + P + +S L+ C ++ G
Sbjct: 436 LCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAG 495
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ + +K + ++ + +V M G G E+ E+
Sbjct: 496 QQVHCDAVK-WGLDLDTSVSNALVKMYGDCGARSESWEI 533
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 175/360 (48%), Gaps = 25/360 (6%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN--- 235
+++H +K G + + N L++ Y+K A +VF M +RN +SWT ++S
Sbjct: 76 ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLS 135
Query: 236 --REDAVSLFKEMRLDG---VCPNDVTFIGLIHAISIG--NLVKEGRMIHGLCIKTNFLS 288
++A +FK M +G P TF ++ A +L+ +HGL KT + S
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYAS 195
Query: 289 EPSVCNCLITMYARFE---SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+VCN LI+MY +Q +++VFD R++I+WNAL+S YA+ G ++ F
Sbjct: 196 NTTVCNALISMYGNCSVGLPLQ-AQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFM 254
Query: 346 GVIK-----ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
++ E +PN +TFGS++ A + S Q + ++K G SD VGSAL+
Sbjct: 255 AMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQ-VFARVLKSGSSSDLYVGSALVS 313
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
+ + G + E++ +F +E++ +I L + E + F + V ++ T
Sbjct: 314 AFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVV-NTDT 372
Query: 461 FLSVLTVCGRNGM----IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
F+ +L+ + + +GR + +L+ I+ + +V+M + G +++A +
Sbjct: 373 FVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRV 432
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 202/651 (31%), Positives = 352/651 (54%), Gaps = 23/651 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG--FE-KSDDALSFALRMNLIGVVF---- 55
+Y + A +F + + WN +L FE + + LS +MN + V
Sbjct: 180 LYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEER 239
Query: 56 -DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D + S AL C L G +H + K +D +++VG+ALI +Y++ G++ +A +V
Sbjct: 240 PDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKV 299
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM--RKGLRLDHVSFTSAASACGHE 172
F E P D V W +I+SGY Q G E LA M + + D V+ S ASAC
Sbjct: 300 FMEYPKPDVVLWTSIISGYEQSG--SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQL 357
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
N +LG+ +HG + G + + N L+ Y K +A+ +FR M D+++ISW+TM+
Sbjct: 358 SNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMV 417
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + D + LF EM + PN VT + ++ A + + ++EG IH L + F
Sbjct: 418 ACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFE 477
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
E +V L+ MY + S + + +F+ + +++I+W L SGYA NG+ ++ F +
Sbjct: 478 METTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNM 537
Query: 348 IKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ ++P+A +L + +E L+ H+ +IK G +++ +G++L+++Y K
Sbjct: 538 LSSGTRPDAIALVKILTTI--SELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCS 595
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLSVL 465
SI ++ +VF K W++II+A HG E + F +M N +P+++TF+S+L
Sbjct: 596 SIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISIL 655
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C +G+I +G ++FD M+ Y ++P+ +HY+ MVD+LGR+G L+ A +++ +P G
Sbjct: 656 SACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAG 715
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ +LLGACRIH N++MGE A L ++P +G Y+L+SN+Y+ +W LR+
Sbjct: 716 PDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRL 775
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K K + K VG S ++ + + F +GD H S+ IY + L ++M+
Sbjct: 776 VKEKRLNKIVGQSVVELK--NEVRSFIAGDRIHDESDHIYEILTKLHAKMR 824
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 153/551 (27%), Positives = 258/551 (46%), Gaps = 55/551 (9%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLHS +K GL + ++ L +Y+R+ + A ++F E P++ WNA+L Y +G
Sbjct: 157 QLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEG 216
Query: 138 DYGVEAILALIEMMRK------GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
++ VE L+L M R D+ S + A +C + L LGK IHG K+
Sbjct: 217 EW-VET-LSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRID 274
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEM 246
+ VG+ L+ Y+KC DA KVF +V+ WT++I S + E A++ F M
Sbjct: 275 GDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRM 334
Query: 247 RL-DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
+ + V P+ VT + + A + + K GR +HG + ++ + N L+ +Y + S
Sbjct: 335 VVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGS 394
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNA 364
++++ +F E+S ++IISW+ +++ YA NG + F ++ K KPN T SVL A
Sbjct: 395 IKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRA 454
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+ L+ G + H + G + + V +AL+DMY K S ++ +FN +K
Sbjct: 455 CACISN--LEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVI 512
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK-------- 476
AW + S A +G M F+ M + G RPD+I + +LT G++ +
Sbjct: 513 AWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFV 572
Query: 477 -----------GRHLFDSMLKDYHIEPSPD-----------HYSCMVDMLGRVGRLEEAE 514
G L + K IE + +S ++ G G+ EEA
Sbjct: 573 IKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEAL 632
Query: 515 ELVGQIPG----GPGLSVLQSLLGACRIHGNVEMGERIADALM---KMEPAGSGSYVLMS 567
+L Q+ P S+L AC G ++ G + D ++ K++P S Y +M
Sbjct: 633 KLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKP-NSEHYAIMV 691
Query: 568 NLYAEKGDWEM 578
+L G+ +M
Sbjct: 692 DLLGRMGELDM 702
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 235/464 (50%), Gaps = 42/464 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLI-GVVFD 56
+++Y K GQ + A+ +F PD+V W +++SG+E+S + AL+F RM + V D
Sbjct: 284 IDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPD 343
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT + S C F G +H + + GLD+++ + N+L+ +Y + G + A +F
Sbjct: 344 PVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFR 403
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEA-ILALI-EMMRKGLRLDHVSFTSAASACGHEKN 174
EM +KD +SW+ +++ Y D G E +L L EM+ K ++ + V+ S AC N
Sbjct: 404 EMSDKDIISWSTMVACY---ADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISN 460
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
LE G +IH +++ G+ +V LM Y KC A +F RM ++VI+W + S
Sbjct: 461 LEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSG 520
Query: 235 NRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ +++ +F+ M G P+ + + ++ IS ++++ +H IK F +
Sbjct: 521 YADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENN 580
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ LI +YA+ S++D+ KVF ++ +++++W+++I+ Y +G A++ F+ +
Sbjct: 581 QFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMAN 640
Query: 350 ES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS-DPIVG----------- 395
S KPN TF S+L+A HS +IK G++ D +V
Sbjct: 641 HSDTKPNNVTFISILSACS-------------HSGLIKEGINMFDIMVNKYKLKPNSEHY 687
Query: 396 SALLDMYGKRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGD 438
+ ++D+ G+ G + + V N + W A++ A H +
Sbjct: 688 AIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQN 731
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 208/654 (31%), Positives = 354/654 (54%), Gaps = 21/654 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
+Y Q A +F+ + NP ++ WN ++ + + D A+ M +GV + T
Sbjct: 52 LYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYT 111
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y L C G+++HS FGL+S+V+V AL+ Y++ G LVEA+R+F M
Sbjct: 112 YPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS 171
Query: 120 NKDSVSWNAILSGYTQDGDYGV--EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
++D V+WNA+++G + YG+ +A+ +++M +G+ + + G K L
Sbjct: 172 HRDVVAWNAMIAGCSL---YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGH 228
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GK +HG ++ + V VG L+ Y+KC+ A K+F M RN +SW+ MI
Sbjct: 229 GKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVX 288
Query: 233 SMNREDAVSLFKEMRL-DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
S ++A+ LF +M L D + P VT ++ A + + GR +H IK + +
Sbjct: 289 SDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDIL 348
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ N L++MYA+ + D+ + FD ++ ++ +S++A++SG QNG + A + F +++ S
Sbjct: 349 LGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNG-NAAVALSIFRMMQLS 407
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ T VL A + +L+HG H ++I G +D ++ +AL+DMY K G I
Sbjct: 408 GIDPDLTTMLGVLPA--CSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKIS 465
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ VFN +W A+I HG + F ++ G++PD ITF+ +L+ C
Sbjct: 466 FAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCS 525
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+G++ +GR FD+M +D+ I P +H CMVD+LGR G ++EA + +P P + +
Sbjct: 526 HSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIW 585
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+LL ACRIH N+E+GE ++ + + P +G++VL+SN+Y+ G W+ A +R K
Sbjct: 586 SALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDW 645
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
G++K G SW ++ I +H F GD +H + +I R E L EMK L + E
Sbjct: 646 GLKKIPGCSWIEINGI--VHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAE 697
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 235/473 (49%), Gaps = 21/473 (4%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y L C+ + ++H +K +++ V + L +Y ++V ARR+FDE+P
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
N + WN I+ Y +G + AI M+ G+R + ++ AC +E G
Sbjct: 71 NPSVILWNQIIRAYAWNGPFD-GAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR--- 236
+IH + G + V V L+ Y+KC + +A ++F M R+V++W MI+
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+DAV L +M+ +G+CPN T +G++ + + G+ +HG C++ +F + V
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-- 352
L+ MYA+ + + + K+FD + R +SW+A+I GY + A++ F +I +
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD 309
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P T GSVL A D+S G++ H +IIK+G D ++G+ LL MY K G I ++
Sbjct: 310 PTPVTLGSVLRACAKLTDLS--RGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAI 367
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG--- 469
R F+ K +++AI+S ++G+ ++ F+ M+ G+ PD T L VL C
Sbjct: 368 RFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLA 427
Query: 470 --RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
++G G + D I + ++DM + G++ A E+ ++
Sbjct: 428 ALQHGFCSHGYLIVRGFATDTLI------CNALIDMYSKCGKISFAREVFNRM 474
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 244/481 (50%), Gaps = 39/481 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
++ Y K G +A +F+++++ D+V+WN +++G + DDA+ ++M G+ ++
Sbjct: 151 VDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNS 210
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T L + + G LH V+ D+ V VG L+ MY++ L+ AR++FD
Sbjct: 211 STIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDV 270
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
M ++ VSW+A++ GY D EA+ +M+ K + V+ S AC +L
Sbjct: 271 MGVRNEVSWSAMIGGYVX-SDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLS 329
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+++H IK+G + +GN L+S Y+KC V DA + F M+ ++ +S++ ++S
Sbjct: 330 RGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCV 389
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N A+S+F+ M+L G+ P+ T +G++ A S ++ G HG I F ++
Sbjct: 390 QNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTL 449
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+CN LI MY++ + + +VF+ + +I+SWNA+I GY +GL + A+ F ++
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG 509
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG------LDSD-PIVGS-----AL 398
KP+ TF +L++ HS ++ G + D IV +
Sbjct: 510 LKPDDITFICLLSSCS-------------HSGLVMEGRLWFDAMSRDFSIVPRMEHCICM 556
Query: 399 LDMYGKRGSIFESQR-VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
+D+ G+ G I E+ + N E W+A++SA H + E K++++ G P+
Sbjct: 557 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG--PE 614
Query: 458 S 458
S
Sbjct: 615 S 615
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 5/188 (2%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SL ++ H H +K ++D V L +Y + ++R+F+E S W II
Sbjct: 23 SLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIR 82
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A A +G ++ ++ + M + GVRP+ T+ VL C I G + S K + +E
Sbjct: 83 AYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI-HSHAKMFGLE 141
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
+ +VD + G L EA+ L + + +++ C ++G + +
Sbjct: 142 SDVFVCTALVDFYAKCGILVEAQRLFSSM-SHRDVVAWNAMIAGCSLYG---LCDDAVQL 197
Query: 552 LMKMEPAG 559
+M+M+ G
Sbjct: 198 IMQMQEEG 205
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/642 (31%), Positives = 352/642 (54%), Gaps = 21/642 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTY 60
Y K G+ A +F+ ++ ++S+N ++SG+ A+ + + D +Y
Sbjct: 54 YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ LS C + F G +H L + GL +V++ N LI MY + R+ AR +F+
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN--LELG 178
D+VSWN++++GY + G Y E + L++M GLRL+ + SA +C N + G
Sbjct: 174 LDNVSWNSLITGYARVGAYE-EMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYG 232
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNR 236
K +HG ++K G + VG L+ Y+K GDA ++FR ++NV+ + MI+ +
Sbjct: 233 KTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQT 292
Query: 237 ED--------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
ED A+ LF +M+ G+ P+D TF +I + + G+ IH K N S
Sbjct: 293 EDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQS 352
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ + + LI +Y+ S +D K F+ +I+SW +I+GYAQNG +A+ F+ ++
Sbjct: 353 DEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELL 412
Query: 349 KE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
KP+ + ++L+A A+ + + G++ H + +K G+ + IV ++ + MY K G+
Sbjct: 413 ASGKKPDEFIITTMLSA--CADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGN 470
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ F E + +W+ +I + A+HG + +N F+ M++ G+ P+ ITFL VLT
Sbjct: 471 LDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTA 530
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ +G ++SM KDY ++ + H +C+VD+L R GRL +A+ + G
Sbjct: 531 CSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPV 590
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+ ++LL CRI+ ++ G+ +A+ L++++P S SYVL+ N+Y + G +R+ MK
Sbjct: 591 MWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMK 650
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
+G+RKE G SW +VG + +H F GD +HP S+ IY+ E
Sbjct: 651 DRGIRKEPGQSWIEVG--NEVHSFVVGDISHPMSQIIYKKLE 690
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 220/428 (51%), Gaps = 16/428 (3%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D+V Y+ + F + G H+ ++K + +++ N + +YS+WG + A+++
Sbjct: 7 LDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKL 66
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD M + +S+N ++SGY G Y +AI E L+LD S+ SACG K+
Sbjct: 67 FDRMSERSVISYNILISGYGGMGFYH-KAIGLFSEARMACLKLDKFSYAGVLSACGQIKD 125
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
LGK IHG++I G G V + N+L+ Y KCE A +F + + +SW ++I+
Sbjct: 126 FALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITG 185
Query: 234 ----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHA--ISIGNLVKEGRMIHGLCIKTNFL 287
E+ + L +M G+ N T + + +++ N+V G+ +HG +K
Sbjct: 186 YARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLD 245
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN-----GLSLAAVQ 342
+ V L+ MYA+ + D+ ++F + ++ +NA+I+G+ Q + A++
Sbjct: 246 LDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALK 305
Query: 343 AFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F + ++ KP+ +TF S++ E + ++G++ H+HI K + SD +GS L+++
Sbjct: 306 LFSQMQRQGIKPSDFTFSSIIKICNHIE--AFEYGKQIHAHICKHNIQSDEFIGSTLIEL 363
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y GS + + FN T + +WT +I+ A++G +ES + F E+ G +PD
Sbjct: 364 YSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFII 423
Query: 462 LSVLTVCG 469
++L+ C
Sbjct: 424 TTMLSACA 431
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 228/507 (44%), Gaps = 66/507 (13%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
LD V++T + GK H IK + + + N ++ YSK G+A K+
Sbjct: 7 LDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKL 66
Query: 217 FRRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F RM +R+VIS+ +IS A+ LF E R+ + + ++ G++ A
Sbjct: 67 FDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDF 126
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
G++IHGL I + + N LI MY + E + + +F+ + +SWN+LI+GY
Sbjct: 127 ALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGY 186
Query: 332 AQNG-----LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
A+ G L L G+ + NA+T GS L + + + +G+ H + +K
Sbjct: 187 ARVGAYEEMLKLLVKMHHTGL----RLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQ 242
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD------YE 440
GLD D +VG+ALLDMY K G + ++ ++F + ++ + A+I+ + D YE
Sbjct: 243 GLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYE 302
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVC--------GRNGMIHKGRHLFDS--------- 483
+ + F +M+ +G++P TF S++ +C G+ H +H S
Sbjct: 303 A-LKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLI 361
Query: 484 -----------MLKDYHIEPSPD--HYSCMVDMLGRVGRLEEAEELVGQIPGG---PGLS 527
LK ++ P D ++ M+ + G+ E A L ++ P
Sbjct: 362 ELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEF 421
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSN----LYAEKGDWEMVAILR 583
++ ++L AC GE++ +K G G+ ++ N +YA+ G+ + I
Sbjct: 422 IITTMLSACADVAAERSGEQVHGYAVK---TGIGTLAIVQNSQISMYAKSGNLDSAKITF 478
Query: 584 KGMKSKGVRKEVGFSWADVGDIDGLHG 610
+ +K+ V SW+ + + HG
Sbjct: 479 EEIKNPDV-----VSWSVMICSNAQHG 500
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 208/650 (32%), Positives = 359/650 (55%), Gaps = 27/650 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N Y K G A +F+ +++ ++V W T++ + ++ D A S M G+ +
Sbjct: 90 INFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSS 149
Query: 58 VTYSTALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT LS L+ L LQ LH+ ++++G S+V + N+++ +Y + GR+ +A+ +F+
Sbjct: 150 VTMLGLLSGVLE----LVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFE 205
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +D +SWN+++SGY Q G+ E + LI M G+ D +F S SA + L
Sbjct: 206 LMDARDVISWNSLVSGYAQLGNIR-EVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLG 264
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MN 235
+GK +HG ++ G + L+ Y KC A ++F M ++VISWT MIS +
Sbjct: 265 VGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLV 324
Query: 236 RED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ D AV++F+ M V P+ T ++ A + G +HG ++ +
Sbjct: 325 QNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIP 384
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
N L+TMYA+ ++ S VFD +S R+I+SWNA++SG+AQNG A+ F + K
Sbjct: 385 SQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKAR 444
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P++ T S+L A + +L G+ H+ + K L ++ +AL+DMY K G +
Sbjct: 445 QRPDSITVVSLLQACASIG--ALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGS 502
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+Q+ F+ ++ +W++II+ HG E+ + + + + G++P+ + +LS+L+ C
Sbjct: 503 AQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSH 562
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
NG++ +G F SM KD+ IEP +H +C+VD+L R GR+EEA ++ P + VL
Sbjct: 563 NGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLG 622
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
LL ACR GNVE+G+ +A ++ ++PA +G+YV +++ YA W+ V + MKS
Sbjct: 623 ILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLH 682
Query: 591 VRKEVGFSWADVGDIDGLHG----FSSGDNTHPRSEEIYRMAECLGSEMK 636
++K G+S+ + LHG F + ++HP+ EEI + + LGSEM+
Sbjct: 683 LKKLPGWSFIE------LHGTITTFFTDHSSHPQFEEIMLVLKILGSEMR 726
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 254/509 (49%), Gaps = 16/509 (3%)
Query: 22 NPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQ 78
NP S+N +++ + D L M DA T+ + + C + F GL
Sbjct: 10 NPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLS 69
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
H ++ G S+ Y+ +LI YS++G AR+VFD M +++ V W ++ YT+ G+
Sbjct: 70 FHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGE 129
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+ V + I M R+G++ V+ S +L+ +H I+ G+G+ V++ N
Sbjct: 130 HDVAFSMYNI-MRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALAN 185
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCP 253
+++ Y KC DA +F M R+VISW +++S N + + L M+ DG+ P
Sbjct: 186 SMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEP 245
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+ TF L+ A ++ + + G+M+HG ++ + + LI MY + ++ + ++F
Sbjct: 246 DQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIF 305
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
+ + +++ISW A+ISG QN + AV F ++K P+ T SVL A AE S
Sbjct: 306 EGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAA--CAELGS 363
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
G H +I++ + D ++L+ MY K G + +S VF+ + +W AI+S
Sbjct: 364 FPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSG 423
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
A++G + F EM RPDSIT +S+L C G +H+G+ + + + K + P
Sbjct: 424 HAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSC-LGP 482
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +VDM + G L A++ ++P
Sbjct: 483 CILIDTALVDMYSKCGDLGSAQKCFDRMP 511
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 318/583 (54%), Gaps = 68/583 (11%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
+ N+LI++ ++ G L EA R+F MP D SWN+++SG+ Q D E++ ++M
Sbjct: 81 TFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH-DRFEESLEYFVKMH 139
Query: 152 RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
R+ L+ SF SA SAC +L +G Q+H + K Y T V +G+ L+ YSKC
Sbjct: 140 REDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVA 199
Query: 212 DANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
A +VF M +RN+++W ++I+ + +A+ +F M G+ P++VT ++ A +
Sbjct: 200 CAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACA 259
Query: 267 IGNLVKEGRMIHGLCIKTN-FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS-- 323
+KEG IH +KTN F + + N L+ MYA+ + ++ +VFD +S R ++S
Sbjct: 260 SLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSET 319
Query: 324 -----------------------------WNALISGYAQNGLSLAAVQAFFGVIKESK-P 353
WNALI+GY QNG + A++ F + +ES P
Sbjct: 320 SMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWP 379
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
YTFG++L SD VG++L+DMY K GSI + R
Sbjct: 380 THYTFGNLLK--------------------------SDIFVGNSLIDMYMKCGSIEDGSR 413
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF + +E+ +W AII A++G + F++M G +PD +T + VL C G+
Sbjct: 414 VFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGL 473
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ +GRH F SM +++ + P DHY+CMVD+LGR G L EA+ L+ +P P V SLL
Sbjct: 474 VEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLL 532
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
AC++HGN+EMG+ A+ L++++P SG YVL+SN+YAE G W V +RK M+ +GV K
Sbjct: 533 AACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTK 592
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ G SW +V +H F D +HP ++IY + + L +MK
Sbjct: 593 QPGCSWIEVE--SRVHVFLVKDKSHPHRKQIYSVLKMLTEQMK 633
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 161/552 (29%), Positives = 261/552 (47%), Gaps = 71/552 (12%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYST 62
KSG D+A +F ++ PD SWN+++SGF + D ++L + ++M+ + + ++ +
Sbjct: 93 KSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGS 152
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
ALS C G Q+H+L+ K ++VY+G+ALI MYS+ G + A VF M ++
Sbjct: 153 ALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERN 212
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
V+WN++++ Y Q+G EA+ + MM GL D V+ S SAC L+ G QIH
Sbjct: 213 LVTWNSLITCYEQNGP-ASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIH 271
Query: 183 GVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNREDAV 240
+K + + +GN L+ Y+KC +A +VF RM RNV+S T+M+S R +V
Sbjct: 272 ARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASV 331
Query: 241 SLFKEMRLDGVCPNDVTFIGLI----------HAISIGNLVKEGRMIHGLCIKTNFL-SE 289
+ M N V++ LI A+ + L+K + N L S+
Sbjct: 332 KAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSD 391
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VI 348
V N LI MY + S++D +VF+++ R+ +SWNA+I GYAQNG A+Q F ++
Sbjct: 392 IFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLV 451
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
KP+ T VL A A G +
Sbjct: 452 CGEKPDHVTMIGVLCACSHA-------------------------------------GLV 474
Query: 409 FESQRVFNETQEKSEFA----WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
E + F +E +T ++ L R G N + M V PD++ + S+
Sbjct: 475 EEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMP---VNPDAVVWGSL 531
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEP-SPDHYSCMVDM---LGRVGRLEEAEELVGQ- 519
L C +G I G+H + +L+ I+P + Y + +M LGR G + +L+ Q
Sbjct: 532 LAACKVHGNIEMGKHAAEKLLE---IDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQ 588
Query: 520 -IPGGPGLSVLQ 530
+ PG S ++
Sbjct: 589 GVTKQPGCSWIE 600
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 184/402 (45%), Gaps = 60/402 (14%)
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
F +C ++ + +H + + + + N L+ Y KC+ DA K+F RM
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 222 DRNVISWTTMISM------------------------------------NREDAVSLFKE 245
RN +W ++IS+ E+++ F +
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
M + N+ +F + A + + G +H L K+ + ++ + + LI MY++ S
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
+ +E+VF + R +++WN+LI+ Y QNG + A++ F ++ +P+ T SV++A
Sbjct: 198 VACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSA 257
Query: 365 VGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
A +LK G + H+ ++K D ++G+AL+DMY K + E++RVF+ ++
Sbjct: 258 --CASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNV 315
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
+ T+++S AR ++ F +M + V +++ +++ +NG + LF
Sbjct: 316 VSETSMVSGYARAASVKAARFMFSKMTQRNV----VSWNALIAGYTQNGENEEALRLF-R 370
Query: 484 MLKDYHIEPSPDHYS-------------CMVDMLGRVGRLEE 512
+LK I P+ HY+ ++DM + G +E+
Sbjct: 371 LLKRESIWPT--HYTFGNLLKSDIFVGNSLIDMYMKCGSIED 410
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 36/301 (11%)
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
PN F L+ + + R++H + T F E + N LI +Y + + + D+ K+
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP------------------- 353
FD + R +WN+LIS ++G L FG + E
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGF-LDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 354 --------------NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
N Y+FGS L+A D+++ G + H+ + K +D +GSAL+
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNM--GTQVHALVSKSRYSTDVYMGSALI 189
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K GS+ ++ VF+ E++ W ++I+ ++G + F M + G+ PD +
Sbjct: 190 DMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEV 249
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
T SV++ C + +G + ++K + +VDM + ++ EA + +
Sbjct: 250 TLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDR 309
Query: 520 I 520
+
Sbjct: 310 M 310
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/610 (32%), Positives = 325/610 (53%), Gaps = 23/610 (3%)
Query: 45 ALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR 104
A+ M G + Y L C++ LH +VK G +++V +L+ +Y R
Sbjct: 66 AMAMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMR 125
Query: 105 WGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS 164
G +AR +FDEMP K+ V+W A+++GYT + V A+ +EM++ G +
Sbjct: 126 CGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQ-PVLALEVFVEMLKLGRYPSDYTLGG 184
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
SAC N++LGKQ+HG +IK G + S+GN L Y+K + F+R+ D+N
Sbjct: 185 MLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKN 244
Query: 225 VISWTTMISMNRED------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
VI+WTTMIS ED ++LF +M V PN+ T ++ + G+ +
Sbjct: 245 VITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQ 304
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ----- 333
G C K + V N + +Y R +++ ++F+E+ +I+WNA+ISG+AQ
Sbjct: 305 GFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSA 364
Query: 334 ------NGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
A++ F +++ + KP+ +TF S+L+ ++L+ G++ H+ IK
Sbjct: 365 KDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTM--MALEQGEQIHAQTIKT 422
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
G SD +V SAL++MY K G I + + F E ++ WT++IS ++HG + F
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLF 482
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
++M G +P+ ITF+S+L+ C G++ + FD M +YHIEP DHY CM+DM R
Sbjct: 483 EDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVR 542
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLM 566
+GRL++A + + P ++ SL+ CR HGN+E+ AD L++++P +YVL+
Sbjct: 543 LGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLL 602
Query: 567 SNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
N+Y G W VA +RK K + + SW + D ++ F + D +HP+S E+Y+
Sbjct: 603 LNMYISTGRWRDVARVRKLSKHEDLGILRDRSWITIR--DKVYFFKADDRSHPQSTELYQ 660
Query: 627 MAECLGSEMK 636
+ E L + K
Sbjct: 661 LLETLLEKAK 670
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 229/467 (49%), Gaps = 34/467 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+N+Y + G A +F+ + ++V+W +++G+ + AL + M +G
Sbjct: 120 VNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSD 179
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T LS C+ G Q+H +K+G S +GN+L +Y++ G L R F
Sbjct: 180 YTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKR 239
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P+K+ ++W ++S +D +Y + ++M++ + + + TS S CG ++ L
Sbjct: 240 IPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNL 299
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+ G K+G T++ V N M Y + T +A ++F M D +VI+W MIS
Sbjct: 300 GKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQ 359
Query: 234 ---MNRED---------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
++D A+ +F+++ + P+ TF ++ S +++G IH
Sbjct: 360 IMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQT 419
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IKT FLS+ V + L+ MY + ++ + K F E+ R +++W ++ISGY+Q+G A+
Sbjct: 420 IKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAI 479
Query: 342 QAFFGVI-KESKPNAYTFGSVLNAVGAA----EDISLKHGQRCHSHIIKVGLDSDPIVG- 395
Q F +I +KPN TF S+L+A A E + + HI +P++
Sbjct: 480 QLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHI-------EPLMDH 532
Query: 396 -SALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
++DM+ + G + ++ E +E W+++++ HG+ E
Sbjct: 533 YGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNME 579
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/567 (33%), Positives = 318/567 (56%), Gaps = 14/567 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ ++ GL ++ LI S +G + AR+VFD++P WNAI+ GY+++
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ +A+L M + D +F AC +L++G+ +H ++G+ V V
Sbjct: 99 HFQ-DALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 198 NVLMSTYSKCEVTGDANKVFR--RMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDG 250
N L++ Y+KC G A VF + +R ++SWT ++S + +A+ +F +MR
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V P+ V + +++A + +K+GR IH +K EP + L TMYA+ + ++
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAE 369
+FD++ +I WNA+ISGYA+NG + A+ F +I K+ +P+ + S ++A A+
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA--CAQ 335
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL+ + + ++ + D + SAL+DM+ K GS+ ++ VF+ T ++ W+A+
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I HG ++ ++ ME GV P+ +TFL +L C +GM+ +G F+ M D+
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHK 454
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I P HY+C++D+LGR G L++A E++ +P PG++V +LL AC+ H +VE+GE A
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
L ++P+ +G YV +SNLYA W+ VA +R MK KG+ K+VG SW +V L
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR--GRLE 572
Query: 610 GFSSGDNTHPRSEEIYRMAECLGSEMK 636
F GD +HPR EEI R E + S +K
Sbjct: 573 AFRVGDKSHPRYEEIERQVEWIESRLK 599
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 216/445 (48%), Gaps = 15/445 (3%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTAL 64
G A +F++L P I WN ++ G+ +++ DAL M L V D+ T+ L
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD--EMPNKD 122
C G +H+ + + G D++V+V N LI +Y++ RL AR VF+ +P +
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSW AI+S Y Q+G+ +EA+ +M + ++ D V+ S +A ++L+ G+ IH
Sbjct: 187 IVSWTAIVSAYAQNGE-PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE----- 237
+KMG + L + Y+KC A +F +M N+I W MIS +
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
+A+ +F EM V P+ ++ I A + +++ R ++ ++++ + + + LI
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
M+A+ S++ + VFD R+++ W+A+I GY +G + A+ + + + PN
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
TF +L A + + + G + + ++ + ++D+ G+ G + ++ V
Sbjct: 426 TFLGLLMACNHSGMV--REGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
Query: 417 -ETQEKSEFAWTAIISALARHGDYE 440
+ W A++SA +H E
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVE 508
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 170/339 (50%), Gaps = 12/339 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPD--IVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+Y K + A +F L P+ IVSW ++S + ++ + AL +M + V D
Sbjct: 163 LYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDW 222
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V + L+ + G +H+ +VK GL+ E + +L TMY++ G++ A+ +FD+
Sbjct: 223 VALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + + + WNA++SGY ++G Y EAI EM+ K +R D +S TSA SAC +LE
Sbjct: 283 MKSPNLILWNAMISGYAKNG-YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
+ ++ + Y V + + L+ ++KC A VF R DR+V+ W+ MI
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+SL++ M GV PNDVTF+GL+ A + +V+EG +
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQH 461
Query: 293 CNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISG 330
C+I + R + + +V + + + W AL+S
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 101/254 (39%), Gaps = 42/254 (16%)
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
++ H+ ++ +GL + + L+ G I +++VF++ F W AII +R+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-----DYHIE 491
++ + + M+ V PDS TF +L C + GR + + + D ++
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 492 -----------------------PSPDH----YSCMVDMLGRVGRLEEAEELVGQIPG-- 522
P P+ ++ +V + G EA E+ Q+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 523 -GPGLSVLQSLLGACRIHGNVEMGERIADALMKM----EPAGSGSYVLMSNLYAEKGDWE 577
P L S+L A +++ G I +++KM EP + ++ +YA+ G
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP---DLLISLNTMYAKCGQVA 274
Query: 578 MVAILRKGMKSKGV 591
IL MKS +
Sbjct: 275 TAKILFDKMKSPNL 288
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++M+ K G + A +F+ + D+V W+ ++ G+ ++ +A+S M GV +
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 58 VTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT+ L C +H G + G + + ++ + +I + R G L +A V
Sbjct: 425 VTFLGLLMAC-NHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
Query: 117 EMPNKDSVS-WNAILSG-----YTQDGDYGVEAILAL 147
MP + V+ W A+LS + + G+Y + + ++
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSI 520
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 208/636 (32%), Positives = 341/636 (53%), Gaps = 22/636 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIG-VVFD 56
+ M+ + G A +F ++ ++ SWN ++ G+ K D+A+ RM +G V D
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPD 195
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ L C G ++H +V++G + ++ V NALITMY + G + AR +FD
Sbjct: 196 VYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP +D +SWNA++SGY ++G G E + M + D ++ TS SAC +
Sbjct: 256 RMPRRDIISWNAMISGYFENG-MGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
LG+ IH I G+ +SV N L Y +A K+F RM ++++SWTTMIS
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYE 374
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E A+ ++ M D V P+++T ++ A + + G +H L IK +S
Sbjct: 375 YNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI MY++ + + + +F + + +ISW ++I+G N A+ F +
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMTL 494
Query: 352 KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+PNA T + L A +GA L G+ H+H+++ G+ D + +ALLDMY + G +
Sbjct: 495 QPNAITLTAALAACARIGA-----LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ FN +Q+K +W +++ + G V+ F M VRPD ITF+S+L C
Sbjct: 550 NIAWNQFN-SQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGC 608
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ M+ +G F M ++Y + P+ HY+C+VD+LGR G L+EA + + ++P P +V
Sbjct: 609 GKSQMVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LL ACRIH N+++GE A + +++ G Y+L+ NLYA+ G W VA +R+ MK
Sbjct: 668 WGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKE 727
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
G+ + G SW +V +H F S D HP+++EI
Sbjct: 728 NGLTVDAGCSWVEVK--GKVHAFLSDDKYHPQTKEI 761
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 239/486 (49%), Gaps = 16/486 (3%)
Query: 37 KSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGN 96
K ++A+ M + V D + + C G +++S+ + V +GN
Sbjct: 74 KLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGN 133
Query: 97 ALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGL 155
A + M+ R+G LV+A VF +M ++ SWN ++ GY + G Y EAI M+ G+
Sbjct: 134 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQG-YFDEAICLYHRMLWVGGV 192
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
+ D +F CG +L G+++H ++ GY + V N L++ Y KC A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 216 VFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
+F RM R++ISW MIS E + + LF MR V P+ +T +I A +
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+ GR IH I T F + SVCN L MY S +++EK+F + C++I+SW +ISG
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISG 372
Query: 331 YAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
Y N L A+ + + ++S KP+ T +VL+A D L G H IK L
Sbjct: 373 YEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGD--LDTGVELHKLAIKARLI 430
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
S IV + L++MY K I ++ +F+ K+ +WT+II+ L + + F++M
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQM 490
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRV 507
+ ++P++IT + L C R G + G+ + +L+ D + + ++DM R
Sbjct: 491 K-MTLQPNAITLTAALAACARIGALMCGKEIHAHVLR---TGVGLDDFLPNALLDMYVRC 546
Query: 508 GRLEEA 513
GR+ A
Sbjct: 547 GRMNIA 552
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 230/714 (32%), Positives = 364/714 (50%), Gaps = 79/714 (11%)
Query: 4 YCKSGQFDKALCIFNNL--NNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
Y + G +A+ + L ++ + WN ++ K DD L F +M +G + D
Sbjct: 69 YIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHY 128
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ L C + G +H+++ GL S V++ N+++ MY R G L +A ++FDE+
Sbjct: 129 TFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEV 188
Query: 119 PNK---DSVSWNAILSGYTQDGDYGVEAILALIEMMRKG------LRLDHVSFTSAASAC 169
+ D VSWN+IL+ Y Q G ++ AL R G LR D ++ + AC
Sbjct: 189 LERKIEDIVSWNSILAAYVQGG----QSRTALRIAFRMGNHYSLKLRPDAITLVNILPAC 244
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
L+ GKQ+HG S++ G V VGN L+S Y+KC +ANKVF + ++V+SW
Sbjct: 245 ASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWN 304
Query: 230 TMIS-----------------MNRED-----------------------AVSLFKEMRLD 249
M++ M ED A+ +F++M+L
Sbjct: 305 AMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLY 364
Query: 250 GVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLS--------EPSVCNCLITMY 300
G+ PN VT L+ S+G L+ G+ H IK N L+ + V N LI MY
Sbjct: 365 GLEPNVVTLASLLSGCASVGALLY-GKQTHAYVIK-NILNLNWNDKEDDLLVLNGLIDMY 422
Query: 301 ARFESMQDSEKVFDELSCRE--IISWNALISGYAQNGLSLAAVQAFFGVIKES---KPNA 355
A+ +S + + +FD + ++ +++W +I GYAQ+G + A++ F + K+ KPNA
Sbjct: 423 AKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNA 482
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRV 414
+T L A ++ L G++ H++ ++ +S+ + VG+ L+DMY K G I ++ V
Sbjct: 483 FTLSCALMACARLGELRL--GRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAV 540
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F+ + ++ +WT++++ HG E ++ F +M+ G D ITFL VL C +GM+
Sbjct: 541 FDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMV 600
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+G F M+K + I P +HY+CMVD+LGR GRL EA EL+ + P V +LL
Sbjct: 601 DQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLS 660
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
A RIH N+E+GE A L ++ GSY L+SNLYA W+ VA +R MK G+RK
Sbjct: 661 ASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKR 720
Query: 595 VGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
G SW + F GD +HP SE+IY + L +K + + + AL
Sbjct: 721 PGCSW--IQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFAL 772
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 178/387 (45%), Gaps = 58/387 (14%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSF------------- 44
++MY K + ++A +F + D+VSWN +++G+ + D ALS
Sbjct: 276 VSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDV 335
Query: 45 ------------------AL----RMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSL 82
AL +M L G+ + VT ++ LS C L+G Q H+
Sbjct: 336 ITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAY 395
Query: 83 IVKFGL-------DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS--VSWNAILSGY 133
++K L + ++ V N LI MY++ AR +FD + KD V+W ++ GY
Sbjct: 396 VIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGY 455
Query: 134 TQDGDYG-VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Q G+ + A I + L+ + + + A AC L LG+Q+H +++ +
Sbjct: 456 AQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENES 515
Query: 193 HV-SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEM 246
V VGN L+ YSK A VF M RNV+SWT++++ E+A+ LF +M
Sbjct: 516 EVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQM 575
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN--CLITMYARFE 304
+ G + +TF+ +++A S +V +G MI+ + F P + C++ + R
Sbjct: 576 QKLGFAVDGITFLVVLYACSHSGMVDQG-MIYFHDMVKGFGITPGAEHYACMVDLLGRAG 634
Query: 305 SMQDSEKVFDELSCREI-ISWNALISG 330
+ ++ ++ +S + W AL+S
Sbjct: 635 RLNEAMELIKNMSMEPTAVVWVALLSA 661
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 203/626 (32%), Positives = 350/626 (55%), Gaps = 20/626 (3%)
Query: 22 NPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQ 78
NP VSW +V++ ++ DAL M G D +A+ C + G Q
Sbjct: 99 NP--VSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQ 156
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H+ +K S++ V NAL+TMYS+ G + + +F+ + +KD +SW +I++G+ Q G
Sbjct: 157 VHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQG- 215
Query: 139 YGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ +EA+ EM+ +G + F SA ACG + E G+QIHG+SIK + VG
Sbjct: 216 FEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVG 275
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVC 252
L Y++C+ A F R+ +++SW ++++ +A+ LF EMR G+
Sbjct: 276 CSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLR 335
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ +T GL+ A + + GR+IH +K + SVCN L++MYAR + + V
Sbjct: 336 PDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDV 395
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP--NAYTFGSVLNAVGAAED 370
F E+ +++++WN++++ AQ+ V F ++ +S+P + + +VL+A +AE
Sbjct: 396 FHEIKDQDVVTWNSILTACAQHNHP-EEVLKLFSLLNKSEPSLDRISLNNVLSA--SAEL 452
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET-QEKSEFAWTAI 429
+ ++ H++ K GL D ++ + L+D Y K GS+ ++ R+F + F+W+++
Sbjct: 453 GYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSL 512
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I A+ G + + F M + G+RP+ +TF+ VLT C R G +++G + + M +Y
Sbjct: 513 IVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYG 572
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I P+ +H SC+VD+L R G+L EA + Q+P P + + ++LL A ++H ++EMG+R A
Sbjct: 573 IVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAA 632
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
+ ++ ++P+ S +YVL+ N+YA G+W A L+K M++ GV+K G SW + L
Sbjct: 633 EGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLK--GELK 690
Query: 610 GFSSGDNTHPRSEEIYRMAECLGSEM 635
F D +HP SEEIY M E +G EM
Sbjct: 691 VFIVEDRSHPESEEIYAMLELIGMEM 716
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 225/466 (48%), Gaps = 42/466 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVF-D 56
+ MY K+G D +F + + D++SW ++++GF + +AL M + G +
Sbjct: 177 VTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPN 236
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ +A C + +G Q+H L +K+ LD ++YVG +L MY+R L AR F
Sbjct: 237 EFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFY 296
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ D VSWN+I++ Y+ +G EA++ EM GLR D ++ AC L
Sbjct: 297 RIEAPDLVSWNSIVNAYSVEGLLS-EALVLFSEMRDSGLRPDGITVRGLLCACVGRDALY 355
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+ IH +K+G VSV N L+S Y++C A VF + D++V++W ++++
Sbjct: 356 HGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACA 415
Query: 235 ---NREDAVSLF-----KEMRLDGVCPNDVTFIGLIHAISIG--NLVKEGRMIHGLCIKT 284
+ E+ + LF E LD + N+V L + +G +VK+ +H K
Sbjct: 416 QHNHPEEVLKLFSLLNKSEPSLDRISLNNV----LSASAELGYFEMVKQ---VHAYAFKA 468
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQA 343
+ + + N LI YA+ S+ D+ ++F+ + + R++ SW++LI GYAQ G + A
Sbjct: 469 GLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDL 528
Query: 344 F-----FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII---KVGLDSDPIVG 395
F G+ +PN TF VL A ++ + C+ + I + G+
Sbjct: 529 FSRMRSLGI----RPNHVTFIGVLTACSRVGFVN----EGCYYYSIMEPEYGIVPTREHC 580
Query: 396 SALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
S ++D+ + G + E+ ++ E W +++A H D E
Sbjct: 581 SCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDME 626
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 213/435 (48%), Gaps = 38/435 (8%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+GN LITMY R + VSW ++++ + Q+G G +A+ M+R
Sbjct: 88 LGNHLITMYGR-----------------NPVSWASVIAAHVQNGRAG-DALGLFSSMLRS 129
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G D + SA AC ++ G+Q+H ++K G+ + V N L++ YSK + D
Sbjct: 130 GTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDG 189
Query: 214 NKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGV-CPNDVTFIGLIHAISI 267
+F R+ D+++ISW ++I+ + +A+ +F+EM ++G PN+ F A
Sbjct: 190 FMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGA 249
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
+ G IHGL IK + V L MYAR +++ + F + +++SWN++
Sbjct: 250 VGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSI 309
Query: 328 ISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
++ Y+ GL L+ F +++S +P+ T +L A + +L HG+ HS+++K
Sbjct: 310 VNAYSVEGL-LSEALVLFSEMRDSGLRPDGITVRGLLCACVGRD--ALYHGRLIHSYLVK 366
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
+GLD D V ++LL MY + + + VF+E +++ W +I++A A+H E V+
Sbjct: 367 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKL 426
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL----FDSMLKDYHIEPSPDHYSCMV 501
F + D I+ +VL+ G + + F + L D + + ++
Sbjct: 427 FSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLS-----NTLI 481
Query: 502 DMLGRVGRLEEAEEL 516
D + G L++A L
Sbjct: 482 DTYAKCGSLDDAMRL 496
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 204/441 (46%), Gaps = 54/441 (12%)
Query: 151 MRKGLRLD-HVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
+ +G R+ H+ +S++S Q+ G ++ +GN L++ Y
Sbjct: 60 LPQGRRVHRHLVASSSSSP---------DAQLAGNTV---------LGNHLITMYG---- 97
Query: 210 TGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHA 264
RN +SW ++I+ + + DA+ LF M G + + A
Sbjct: 98 -------------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRA 144
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+ V GR +H +K+ S+ V N L+TMY++ + D +F+ + +++ISW
Sbjct: 145 CTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISW 204
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
++I+G+AQ G + A+Q F +I E PN + FGS A GA S ++G++ H
Sbjct: 205 GSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVG--SWEYGEQIHGL 262
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
IK LD D VG +L DMY + ++ ++ F + +W +I++A + G
Sbjct: 263 SIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEA 322
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVC-GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+ F EM + G+RPD IT +L C GR+ + H GR L S L ++ + ++
Sbjct: 323 LVLFSEMRDSGLRPDGITVRGLLCACVGRDALYH-GR-LIHSYLVKLGLDGDVSVCNSLL 380
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG 561
M R L A ++ +I + S+L AC H + E ++ L K EP S
Sbjct: 381 SMYARCSDLSSAMDVFHEIK-DQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP--SL 437
Query: 562 SYVLMSNLY---AEKGDWEMV 579
+ ++N+ AE G +EMV
Sbjct: 438 DRISLNNVLSASAELGYFEMV 458
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 30/292 (10%)
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS-------VCNCLITMYARFESMQDSE 310
+ L+ A S + +GR +H + ++ S + + N LITMY R
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGR-------- 98
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAE 369
+SW ++I+ + QNG + A+ F +++ + + + GS + A
Sbjct: 99 ---------NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
D+ G++ H+H +K SD IV +AL+ MY K G + + +F ++K +W +I
Sbjct: 150 DVGT--GRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSI 207
Query: 430 ISALARHGDYESVMNQFKEMENKGV-RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
I+ A+ G + F+EM +G P+ F S CG G G + +K Y
Sbjct: 208 IAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIK-Y 266
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
++ + DM R L+ A +I P L S++ A + G
Sbjct: 267 RLDRDLYVGCSLSDMYARCKNLDSARVAFYRIE-APDLVSWNSIVNAYSVEG 317
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 201/577 (34%), Positives = 332/577 (57%), Gaps = 17/577 (2%)
Query: 72 GFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL 130
G G ++H ++ GL D V +GN L+ MY++ G + +ARRVF M KDSVSWN+++
Sbjct: 48 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMI 107
Query: 131 SGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
+G Q+G + +EA+ M R + + S+ S+C K +LG+QIHG S+K+G
Sbjct: 108 TGLDQNGCF-IEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 166
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----SMNRE--DAVSLFK 244
+VSV N LM+ Y++ + K+F M + + +SW ++I S R +AV+ F
Sbjct: 167 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFL 226
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
G N +TF ++ A+S + + G+ IHGL +K N E + N LI Y +
Sbjct: 227 NALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCG 286
Query: 305 SMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQ-AFFGVIKESKPNAYTFGSVL 362
M EK+F +S R+ ++WN++ISGY N L A+ +F + + +++ + +VL
Sbjct: 287 EMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVL 346
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
+A + +L+ G H+ ++ L+SD +VGSAL+DMY K G + + R FN ++
Sbjct: 347 SAFASVA--TLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN 404
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLSVLTVCGRNGMIHKGRHLF 481
++W ++IS ARHG E + F M+ G PD +TF+ VL+ C G++ +G F
Sbjct: 405 SYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHF 464
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA-CRIHG 540
+SM Y + P +H+SCM D+LGR G L++ E+ + ++P P + + +++LGA CR +G
Sbjct: 465 ESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANG 524
Query: 541 -NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSW 599
E+G++ A+ L ++EP + +YVL+ N+YA G WE + RK MK V+KE G+SW
Sbjct: 525 RKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSW 584
Query: 600 ADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ DG+H F +GD +HP ++ IY+ + L +M+
Sbjct: 585 VTMK--DGVHMFVAGDKSHPDTDVIYKKLKELNRKMR 619
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 192/379 (50%), Gaps = 11/379 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K G A +F + D VSWN++++G +++ +A+ M ++ +
Sbjct: 76 VNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGS 135
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++LS C + G Q+H +K G+D V V NAL+T+Y+ G L E R++F
Sbjct: 136 FTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSS 195
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D VSWN+I+ EA+ + +R G +L+ ++F+S SA EL
Sbjct: 196 MPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGEL 255
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS--M 234
GKQIHG+++K + N L++ Y KC K+F RM + R+ ++W +MIS +
Sbjct: 256 GKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYI 315
Query: 235 NRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E A+ L M G + + ++ A + ++ G +H ++ S+
Sbjct: 316 HNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVV 375
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVIK 349
V + L+ MY++ + + + F+ + R SWN++ISGYA++G A++ F +
Sbjct: 376 VGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDG 435
Query: 350 ESKPNAYTFGSVLNAVGAA 368
++ P+ TF VL+A A
Sbjct: 436 QTPPDHVTFVGVLSACSHA 454
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 206/636 (32%), Positives = 341/636 (53%), Gaps = 17/636 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----SDDALSFALRMNLIGVVFD 56
+ M+ G+ A +F+ + D +SWN ++S + S L F+ M G+ D
Sbjct: 187 ITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFS-DMRHHGLRPD 245
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
A T + +S C + F G +HSL ++ LDS V V NAL+ MYS G+L +A +F
Sbjct: 246 ATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 305
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +D +SWN ++S Y Q+ + +A+ L ++ +H++F+SA AC L
Sbjct: 306 NMSRRDLISWNTMISSYVQNCN-STDALKTLGQLFHTNESPNHLTFSSALGACSSPGALI 364
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GK +H + +++ ++ VGN L++ Y KC DA KVF+ M +++S+ +I
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 424
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN-LVKEGRMIHGLCIKTNFLSEP 290
+ A+ +F MR G+ PN +T I + + + N L GR +H I+T FLS+
Sbjct: 425 VLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDE 484
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N LITMYA+ +++ S +F+ ++ + I+SWNA+I+ Q G A++ F +
Sbjct: 485 YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHA 544
Query: 351 -SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+K + L++ A SL+ G + H +K GLDSD V +A +DMYGK G +
Sbjct: 545 GNKLDRVCLAECLSS--CASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMD 602
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E +V + + + W +IS A++G ++ FK+M G +PD +TF+++L+ C
Sbjct: 603 EMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACS 662
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ KG ++SM + + P H C+VD+LGR+GR EAE+ + ++P P +
Sbjct: 663 HAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIW 722
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+SLL + R H N+E+G + A L++++P +YVL+SNLYA W V LR MK+
Sbjct: 723 RSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTI 782
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+ K SW + + + F GD H +E+IY
Sbjct: 783 NINKRPACSWLKLK--NEVSTFGIGDRGHKHAEKIY 816
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 266/526 (50%), Gaps = 12/526 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y G A +F + ++VSW ++ + ++AL +M GV +A
Sbjct: 86 LHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNA 145
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++T +S C E + GLQ+ S ++ GL ++V V N+LITM+ GR+ +A ++FD
Sbjct: 146 NAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDR 205
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D++SWNA++S Y+ G + L +M GLR D + S S C +
Sbjct: 206 MEEHDTISWNAMISMYSHQG-ICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSH 264
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G IH + ++ + V+V N L++ YS DA +F M R++ISW TMIS
Sbjct: 265 GSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQ 324
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N DA+ ++ PN +TF + A S + +G+M+H + ++ + V
Sbjct: 325 NCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLV 384
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LITMY + SM+D+EKVF + +I+S+N LI GYA A+Q F +
Sbjct: 385 GNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGI 444
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN T ++ + ++ D+ +G+ H++II+ G SD V ++L+ MY K G++ S
Sbjct: 445 KPNYITMINIHGSFASSNDLH-NYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS 503
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+FN K+ +W AII+A + G E + F +M++ G + D + L+ C
Sbjct: 504 TNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASL 563
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
+ +G L +K ++ + +DM G+ G+++E ++V
Sbjct: 564 ASLEEGMQLHGLGMKS-GLDSDSYVVNAAMDMYGKCGKMDEMLQVV 608
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 252/509 (49%), Gaps = 21/509 (4%)
Query: 27 SWNTVLSGFEK-SDDALSFALR--MNLIGVVFDAVTYSTALSFCLDH---EGFLFGLQLH 80
+W T +SG + D +F + M GV ++ ++ C EG G +H
Sbjct: 8 TWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIH 67
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
+L + GL VY+G AL+ +Y G + +A+R+F EMP ++ VSW A++ + +G Y
Sbjct: 68 ALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNG-YL 126
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EA+ A +M R G+ + +F + S CG +N G Q+ I G VSV N L
Sbjct: 127 EEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSL 186
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFKEMRLDGVCPND 255
++ + DA K+F RM + + ISW MISM + +F +MR G+ P+
Sbjct: 187 ITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDA 246
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
T L+ + + G IH LC++++ S +V N L+ MY+ + D+E +F
Sbjct: 247 TTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWN 306
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLK 374
+S R++ISWN +IS Y QN S A++ + ++ PN TF S L A + +L
Sbjct: 307 MSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPG--ALI 364
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G+ H+ ++++ L + +VG++L+ MYGK S+ ++++VF ++ +I A
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 424
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVL-TVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
D M F M + G++P+ IT +++ + N + + GR L +++ +
Sbjct: 425 VLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLS-- 482
Query: 494 PDHY--SCMVDMLGRVGRLEEAEELVGQI 520
D Y + ++ M + G LE + + I
Sbjct: 483 -DEYVANSLITMYAKCGNLESSTNIFNSI 510
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 209/637 (32%), Positives = 335/637 (52%), Gaps = 18/637 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+ MY G F A IF L WN ++ GF + D AL F +M G + D
Sbjct: 88 LGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDK 147
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + C G +H I G + +V+VG++LI YS G + +AR +FD
Sbjct: 148 YTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDR 207
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP+KD V WN +L+GY ++GD+ A +EM R + V+F S C E +
Sbjct: 208 MPSKDGVLWNVMLNGYVKNGDWD-NATGVFMEMRRTETNPNSVTFACVLSVCASEIMINF 266
Query: 178 GKQIHGVSIKMGYGTHVSVGNV--LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
G Q+HG+ + G V N L+ Y KC A K+F + +++ T MIS
Sbjct: 267 GSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGY 326
Query: 234 ----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
MN +A+ +F+ + + + N VT ++ A + + G+ +HG +K
Sbjct: 327 VLNGMN-NNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGS 385
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-I 348
V + ++ MYA+ + + + F +S ++ + WN++I+ +QNG A+ F + +
Sbjct: 386 CYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGM 445
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+K + + + L+A A +L +G+ H+ +++ SD SAL+DMY K G++
Sbjct: 446 AGTKYDCVSISAALSA--CANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNL 503
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ RVF+ +EK+E +W +II+A HG + +N F M G++PD +TFL++++ C
Sbjct: 504 DLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISAC 563
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G G + +G H F M ++ I +HY+CMVD+ GR GRL EA ++ +P P V
Sbjct: 564 GHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGV 623
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LLGACR+HGNVE+ E + L ++P SG YVL+SN++A G WE V +R MK
Sbjct: 624 WGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKE 683
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+GV+K G SW DV + H F + D +HP+S +IY
Sbjct: 684 RGVQKVPGCSWIDVNNTT--HMFVAADRSHPQSSQIY 718
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 229/465 (49%), Gaps = 22/465 (4%)
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
+ L C D G G Q H+ ++ G+ +G L+ MY G ++A+ +F ++
Sbjct: 51 SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
S WN ++ G+T G + A+L +M+ G D +F ACG ++ LG+ +
Sbjct: 111 CSEPWNWMIRGFTMMGQFDF-ALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVV 169
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNR 236
H MG+ V VG+ L+ YS+ DA +F RM ++ + W M+ + +
Sbjct: 170 HDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDW 229
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN-- 294
++A +F EMR PN VTF ++ + ++ G +HGL + + + V N
Sbjct: 230 DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTF 289
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI +Y + ++ + K+FD+ + +I+ A+ISGY NG++ A++ F +++E +
Sbjct: 290 ALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRA 349
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N+ T SVL A ++L G+ H HI+K G VGSA++DMY K G + + +
Sbjct: 350 NSVTLASVLPACAGLAALTL--GKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQ 407
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
F +K W ++I++ +++G E ++ F++M G + D ++ + L+ C
Sbjct: 408 TFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPA 467
Query: 474 IHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+H G+ + M++ D E S ++DM + G L+ A
Sbjct: 468 LHYGKEIHAFMMRGAFRSDLFAE------SALIDMYSKCGNLDLA 506
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 183/407 (44%), Gaps = 15/407 (3%)
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
S C L G+Q H + G G + +G L+ Y C DA +F ++
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 222 DRNVISWTTMIS----MNREDAVSLFK-EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
W MI M + D LF +M G P+ TF +I A N V GR+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
+H F + V + LI Y+ + D+ +FD + ++ + WN +++GY +NG
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 337 SLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A F + + E+ PN+ TF VL+ A +I + G + H ++ GL+ D V
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSV--CASEIMINFGSQLHGLVVSSGLEMDSPVA 286
Query: 396 S--ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+ AL+D+Y K + ++++F++ TA+IS +G + + F+ + +
Sbjct: 287 NTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQER 346
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+R +S+T SVL C + G+ L +LK+ H S S ++DM + GRL+ A
Sbjct: 347 MRANSVTLASVLPACAGLAALTLGKELHGHILKNGH-GGSCYVGSAIMDMYAKCGRLDLA 405
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGS 560
+ I + S++ +C +G E E I D +M AG+
Sbjct: 406 HQTFIGISDKDAV-CWNSMITSCSQNGKPE--EAI-DLFRQMGMAGT 448
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 188/567 (33%), Positives = 318/567 (56%), Gaps = 14/567 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ ++ GL ++ LI S +G + AR+VFD++P WNAI+ GY+++
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ +A+L M + D +F AC +L++G+ +H ++G+ V V
Sbjct: 99 HFQ-DALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 198 NVLMSTYSKCEVTGDANKVFR--RMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDG 250
N L++ Y+KC G A VF + +R ++SWT ++S + +A+ +F MR
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V P+ V + +++A + +K+GR IH +K EP + L TMYA+ + ++
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAE 369
+FD++ +I WNA+ISGYA+NG + A+ F +I K+ +P+ + S ++A A+
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA--CAQ 335
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL+ + + ++ + D + SAL+DM+ K GS+ ++ VF+ T ++ W+A+
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I HG ++ ++ ME GV P+ +TFL +L C +GM+ +G F+ ++ D+
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFN-LMADHK 454
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I P HY+C++D+LGR G L++A E++ +P PG++V +LL AC+ H +VE+GE A
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
L ++P+ +G YV +SNLYA W+ VA +R MK KG+ K+VG SW +V L
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR--GRLE 572
Query: 610 GFSSGDNTHPRSEEIYRMAECLGSEMK 636
F GD +HPR EEI R E + S +K
Sbjct: 573 AFRVGDKSHPRYEEIERQVEWIESRLK 599
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 215/445 (48%), Gaps = 15/445 (3%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTAL 64
G A +F++L P I WN ++ G+ +++ DAL M L V D+ T+ L
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD--EMPNKD 122
C G +H+ + + G D++V+V N LI +Y++ RL AR VF+ +P +
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSW AI+S Y Q+G+ +EA+ M + ++ D V+ S +A ++L+ G+ IH
Sbjct: 187 IVSWTAIVSAYAQNGE-PMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE----- 237
+KMG + L + Y+KC A +F +M N+I W MIS +
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
+A+ +F EM V P+ ++ I A + +++ R ++ ++++ + + + LI
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
M+A+ S++ + VFD R+++ W+A+I GY +G + A+ + + + PN
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
TF +L A + + + G + + ++ + ++D+ G+ G + ++ V
Sbjct: 426 TFLGLLMACNHSGMV--REGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
Query: 417 -ETQEKSEFAWTAIISALARHGDYE 440
+ W A++SA +H E
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVE 508
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 170/339 (50%), Gaps = 12/339 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPD--IVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+Y K + A +F L P+ IVSW ++S + ++ + AL M + V D
Sbjct: 163 LYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDW 222
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V + L+ + G +H+ +VK GL+ E + +L TMY++ G++ A+ +FD+
Sbjct: 223 VALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + + + WNA++SGY ++G Y EAI EM+ K +R D +S TSA SAC +LE
Sbjct: 283 MKSPNLILWNAMISGYAKNG-YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
+ ++ + Y V + + L+ ++KC A VF R DR+V+ W+ MI
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+SL++ M GV PNDVTF+GL+ A + +V+EG L +
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQH 461
Query: 293 CNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISG 330
C+I + R + + +V + + + W AL+S
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 100/254 (39%), Gaps = 42/254 (16%)
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
++ H+ ++ +GL + + L+ G I +++VF++ F W AII +R+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-----DYHIE 491
++ + + M+ V PDS TF +L C + GR + + + D ++
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 492 -----------------------PSPDH----YSCMVDMLGRVGRLEEAEELVGQIPG-- 522
P P+ ++ +V + G EA E+ +
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217
Query: 523 -GPGLSVLQSLLGACRIHGNVEMGERIADALMKM----EPAGSGSYVLMSNLYAEKGDWE 577
P L S+L A +++ G I +++KM EP + ++ +YA+ G
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP---DLLISLNTMYAKCGQVA 274
Query: 578 MVAILRKGMKSKGV 591
IL MKS +
Sbjct: 275 TAKILFDKMKSPNL 288
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++M+ K G + A +F+ + D+V W+ ++ G+ ++ +A+S M GV +
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 58 VTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT+ L C +H G + G +L+ ++ + +I + R G L +A V
Sbjct: 425 VTFLGLLMAC-NHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
Query: 117 EMPNKDSVS-WNAILSG-----YTQDGDYGVEAILAL 147
MP + V+ W A+LS + + G+Y + + ++
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSI 520
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 205/643 (31%), Positives = 346/643 (53%), Gaps = 15/643 (2%)
Query: 3 MYCKSGQFDKALCIFNNLN-NPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAV 58
MY G D+A +F+ + VSWN ++S + K+D A+ M GV +
Sbjct: 144 MYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEF 203
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+S ++ C G ++H+++++ G D +V+ NAL+ MYS+ G + A VF ++
Sbjct: 204 GFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKV 263
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P D VSWNA +SG G + A+ L++M GL + + +S AC LG
Sbjct: 264 PETDVVSWNAFISGCVLHG-HDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLG 322
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----- 233
+QIHG +K + + L+ Y+K + DA KVF + R+++ W +IS
Sbjct: 323 RQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHG 382
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+A+SLF MR +G N T ++ + + + + R +H L K FLS+ V
Sbjct: 383 AQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVV 442
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N LI Y + + + + +VF++ +II++ ++I+ +Q A++ F ++++
Sbjct: 443 NGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLD 502
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ + S+LNA + + + G++ H+H+IK SD G+AL+ Y K GSI ++
Sbjct: 503 PDPFVLSSLLNACASLS--AYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDAD 560
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
F+ EK +W+A+I LA+HG + ++ F M ++ + P+ IT SVL C G
Sbjct: 561 LAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAG 620
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ + + F+SM + + IE + +HY+CM+D+LGR G+L++A ELV +P +V +L
Sbjct: 621 LVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGAL 680
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L A R+H + E+G A+ L +EP SG++VL++N YA G W+ VA +RK MK V+
Sbjct: 681 LAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVK 740
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
KE SW ++ D +H F GD +HPR+ +IY + LG M
Sbjct: 741 KEPAMSWVELK--DKVHTFIVGDKSHPRARDIYAKLDELGDLM 781
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 162/567 (28%), Positives = 277/567 (48%), Gaps = 25/567 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y K A +F+ + +P VSW+++++ + + DAL M V +
Sbjct: 44 LSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNE 103
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
L C GF G QLH+L + GL +++V NAL+ MY +G + EAR VFDE
Sbjct: 104 FVLPVVLK-CAPDAGF--GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDE 160
Query: 118 MP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+++VSWN ++S Y ++ D A+ EM+ G++ + F+ +AC ++LE
Sbjct: 161 AGCERNTVSWNGLMSAYVKN-DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLE 219
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+++H + I+ GY V N L+ YSK A VF ++ + +V+SW IS
Sbjct: 220 AGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCV 279
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + A+ L +M+ G+ PN T ++ A + GR IHG +K N S+
Sbjct: 280 LHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNY 339
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ L+ MYA+ + D++KVFD + R+++ WNALISG + A+ F + KE
Sbjct: 340 IAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEG 399
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
N T +VL + + E IS ++ H+ K+G SD V + L+D Y K +
Sbjct: 400 FDVNRTTLAAVLKSTASLEAIS--DTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNY 457
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ RVF + A+T++I+AL++ E + F EM KG+ PD S+L C
Sbjct: 458 AYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACAS 517
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYS--CMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G+ + ++K + D ++ +V + G +E+A+ +P G+
Sbjct: 518 LSAYEQGKQVHAHLIKRQFMS---DVFAGNALVYTYAKCGSIEDADLAFSGLP-EKGVVS 573
Query: 529 LQSLLGACRIHGNVEMGERIADALMKM 555
+++G HG+ G+R D +M
Sbjct: 574 WSAMIGGLAQHGH---GKRALDVFHRM 597
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 143/565 (25%), Positives = 255/565 (45%), Gaps = 55/565 (9%)
Query: 71 EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL 130
+ L G +H+ ++K GL + N L++ YS+ ARRVFDE+P+ VSW++++
Sbjct: 18 QSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLV 75
Query: 131 SGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
+ Y+ + +A+ A M +R + C + G Q+H +++ G
Sbjct: 76 TAYSNNA-MPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAG--FGTQLHALAMATGL 131
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMISMNRED-----AVSLFK 244
G + V N L++ Y +A VF +RN +SW ++S ++ AV +F
Sbjct: 132 GGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFG 191
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
EM GV PN+ F +++A + ++ GR +H + I+T + + N L+ MY++
Sbjct: 192 EMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLG 251
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVL 362
++ + VF ++ +++SWNA ISG +G A++ +K S PN +T S+L
Sbjct: 252 DIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQ-MKSSGLVPNVFTLSSIL 310
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
A + +L G++ H ++K DSD + L+DMY K G + ++++VF+ ++
Sbjct: 311 KACAGSGAFNL--GRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRD 368
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH--- 479
W A+IS + + ++ F M +G + T +VL I R
Sbjct: 369 LVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHA 428
Query: 480 ----------------LFDSMLK----DYHIEPSPDH-------YSCMVDMLGRVGRLEE 512
L DS K +Y H ++ M+ L + E+
Sbjct: 429 LAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGED 488
Query: 513 AEELVGQIPG---GPGLSVLQSLLGACRIHGNVEMGERIADALMK---MEPAGSGSYVLM 566
A +L ++ P VL SLL AC E G+++ L+K M +G+ ++
Sbjct: 489 AIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVY 548
Query: 567 SNLYAEKGDWEMVAILRKGMKSKGV 591
+ YA+ G E + G+ KGV
Sbjct: 549 T--YAKCGSIEDADLAFSGLPEKGV 571
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 206/636 (32%), Positives = 341/636 (53%), Gaps = 17/636 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----SDDALSFALRMNLIGVVFD 56
+ M+ G+ A +F+ + D +SWN ++S + S L F+ M G+ D
Sbjct: 489 ITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFS-DMRHHGLRPD 547
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
A T + +S C + F G +HSL ++ LDS V V NAL+ MYS G+L +A +F
Sbjct: 548 ATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 607
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +D +SWN ++S Y Q+ + +A+ L ++ +H++F+SA AC L
Sbjct: 608 NMSRRDLISWNTMISSYVQNCN-STDALKTLGQLFHTNESPNHLTFSSALGACSSPGALI 666
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GK +H + +++ ++ VGN L++ Y KC DA KVF+ M +++S+ +I
Sbjct: 667 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 726
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN-LVKEGRMIHGLCIKTNFLSEP 290
+ A+ +F MR G+ PN +T I + + + N L GR +H I+T FLS+
Sbjct: 727 VLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDE 786
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N LITMYA+ +++ S +F+ ++ + I+SWNA+I+ Q G A++ F +
Sbjct: 787 YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHA 846
Query: 351 -SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+K + L++ A SL+ G + H +K GLDSD V +A +DMYGK G +
Sbjct: 847 GNKLDRVCLAECLSS--CASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMD 904
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E +V + + + W +IS A++G ++ FK+M G +PD +TF+++L+ C
Sbjct: 905 EMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACS 964
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ KG ++SM + + P H C+VD+LGR+GR EAE+ + ++P P +
Sbjct: 965 HAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIW 1024
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+SLL + R H N+E+G + A L++++P +YVL+SNLYA W V LR MK+
Sbjct: 1025 RSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTI 1084
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+ K SW + + + F GD H +E+IY
Sbjct: 1085 NINKRPACSWLKLK--NEVSTFGIGDRGHKHAEKIY 1118
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 266/526 (50%), Gaps = 12/526 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y G A +F + ++VSW ++ + ++AL +M GV +A
Sbjct: 388 LHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNA 447
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++T +S C E + GLQ+ S ++ GL ++V V N+LITM+ GR+ +A ++FD
Sbjct: 448 NAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDR 507
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D++SWNA++S Y+ G + L +M GLR D + S S C +
Sbjct: 508 MEEHDTISWNAMISMYSHQG-ICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSH 566
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G IH + ++ + V+V N L++ YS DA +F M R++ISW TMIS
Sbjct: 567 GSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQ 626
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N DA+ ++ PN +TF + A S + +G+M+H + ++ + V
Sbjct: 627 NCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLV 686
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LITMY + SM+D+EKVF + +I+S+N LI GYA A+Q F +
Sbjct: 687 GNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGI 746
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN T ++ + ++ D+ +G+ H++II+ G SD V ++L+ MY K G++ S
Sbjct: 747 KPNYITMINIHGSFASSNDLH-NYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS 805
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+FN K+ +W AII+A + G E + F +M++ G + D + L+ C
Sbjct: 806 TNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASL 865
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
+ +G L +K ++ + +DM G+ G+++E ++V
Sbjct: 866 ASLEEGMQLHGLGMKS-GLDSDSYVVNAAMDMYGKCGKMDEMLQVV 910
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 255/522 (48%), Gaps = 21/522 (4%)
Query: 14 LCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDH 70
L +F+ + + +W T +SG + A M GV ++ ++ C
Sbjct: 297 LHLFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERR 356
Query: 71 ---EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN 127
EG G +H+L + GL VY+G AL+ +Y G + +A+R+F EMP ++ VSW
Sbjct: 357 GRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWT 416
Query: 128 AILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
A++ + +G Y EA+ A +M R G+ + +F + S CG +N G Q+ I
Sbjct: 417 ALMVALSSNG-YLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIV 475
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----L 242
G VSV N L++ + DA K+F RM + + ISW MISM + +
Sbjct: 476 SGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLV 535
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
F +MR G+ P+ T L+ + + G IH LC++++ S +V N L+ MY+
Sbjct: 536 FSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSA 595
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSV 361
+ D+E +F +S R++ISWN +IS Y QN S A++ + ++ PN TF S
Sbjct: 596 AGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSA 655
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L A + +L G+ H+ ++++ L + +VG++L+ MYGK S+ ++++VF
Sbjct: 656 LGACSSPG--ALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH 713
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL-TVCGRNGMIHKGRHL 480
++ +I A D M F M + G++P+ IT +++ + N + + GR L
Sbjct: 714 DIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPL 773
Query: 481 FDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
+++ + D Y + ++ M + G LE + + I
Sbjct: 774 HAYIIRTGFLS---DEYVANSLITMYAKCGNLESSTNIFNSI 812
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 120/254 (47%), Gaps = 16/254 (6%)
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE---KVFDELSCREIISWNALISGYAQ 333
IHGL ++ N L+ Y R + +FDE++ R +W +SG +
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320
Query: 334 NGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAV-GAAEDISLKHGQRCHSHIIKVGLDSD 391
G A + G+ + P + + S++ A D + G H+ + GL +
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+G+ALL +YG RG + ++QR+F E E++ +WTA++ AL+ +G E + +++M
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440
Query: 452 KGVRPDSITFLSVLTVCGR-----NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
GV ++ F +V+++CG G+ + + + + S ++ M G
Sbjct: 441 DGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANS------LITMFGN 494
Query: 507 VGRLEEAEELVGQI 520
+GR+ +AE+L ++
Sbjct: 495 LGRVHDAEKLFDRM 508
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRW---GRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
+H L V+ L + N L+ Y R A +FDEM ++ +W +SG +
Sbjct: 38 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC---GHEKNLELGKQIHGVSIKMGYGT 192
G G A L M +G+ L + S +AC G ++ + G IH ++ + G
Sbjct: 98 CGRDGT-AFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMG 156
Query: 193 HVSVGNVLM 201
+V +G L+
Sbjct: 157 NVYIGRALL 165
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 208/648 (32%), Positives = 356/648 (54%), Gaps = 19/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY + G D A +F+ + + + VSW V++ ++ DA+ M G + D
Sbjct: 89 ITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQ 148
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+A+ C + G Q+H+ +K+ S++ V NAL+TMYS+ G + + +F+
Sbjct: 149 FALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFER 208
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKN-L 175
+ +KD +SW +I++G Q G ++A+ EM+ +G+ + F S AC N L
Sbjct: 209 IRDKDLISWGSIIAGLAQQGR-EMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSL 267
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E G+QIHGVS+K + G L Y++C A KVF R+ +++SW ++I+
Sbjct: 268 EYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAF 327
Query: 236 R-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+A+ LF EMR G+ P+ +T + L+ A + + +GR IH +K +
Sbjct: 328 SAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDV 387
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N L++MYAR + VF E R++++WN++++ Q+ L V F ++
Sbjct: 388 IVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQ-HLEDVFKLFSLLHR 446
Query: 351 SKP--NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S P + + +VL+A +AE + ++ H++ KVGL D ++ + L+D Y K GS+
Sbjct: 447 SMPSLDRISLNNVLSA--SAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSL 504
Query: 409 FESQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
++ ++F + F+W+++I A+ G + ++ F M N GV+P+ +TF+ VLT
Sbjct: 505 DDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTA 564
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C R G++ +G + + M +Y I P+ +H SC++D+L R GRL EA + V Q+P P +
Sbjct: 565 CSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDII 624
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+ ++LL A R H +V+MG+R A+ ++ ++P+ S +YVL+ N+YA G+W A L+K M+
Sbjct: 625 MWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMR 684
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
S GV+K G SW + L F D +HP S+EIY M E +G EM
Sbjct: 685 SSGVQKSPGKSWIKLK--GELKVFIVEDRSHPESDEIYTMLEVIGLEM 730
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 225/443 (50%), Gaps = 36/443 (8%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+ N LITMY R G AR VFD M +++ VSW A+++ + Q+ +A+ M+R
Sbjct: 84 LSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCA-DAMGLFSSMLRS 142
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G D + SA AC +L LG+Q+H +IK G+ + V N L++ YSK GD
Sbjct: 143 GTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDG 202
Query: 214 NKVFRRMHDRNVISWTTMIS----MNRE-DAVSLFKEMRLDGV-CPNDVTFIGLIHAIS- 266
+F R+ D+++ISW ++I+ RE DA+ +F+EM +GV PN+ F + A S
Sbjct: 203 FALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSV 262
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSVCNC-LITMYARFESMQDSEKVFDELSCREIISWN 325
+ N ++ G IHG+ +K L S C L MYAR + + KVF + +++SWN
Sbjct: 263 VVNSLEYGEQIHGVSVKYQ-LDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWN 321
Query: 326 ALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
+LI+ ++ GL L+ F +++S +P+ T ++L A + +L G+ HS++
Sbjct: 322 SLINAFSAKGL-LSEAMVLFSEMRDSGLRPDGITVMALLCACVGYD--ALHQGRSIHSYL 378
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
+K+GL D IV ++LL MY + + VF+ET ++ W +I++A +H E V
Sbjct: 379 VKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVF 438
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIH--KGRHLF--------DSMLKDYHIEPS 493
F + D I+ +VL+ G K H + D+ML +
Sbjct: 439 KLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSN------ 492
Query: 494 PDHYSCMVDMLGRVGRLEEAEEL 516
++D + G L++A +L
Sbjct: 493 -----GLIDTYAKCGSLDDANKL 510
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 372 SLKHGQRCHSHIIKVG-----LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
SL G+ H H++ L + I+ + L+ MYG+ G+ ++ VF+ +++ +W
Sbjct: 57 SLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDRNPVSW 116
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
A+I+A A++ M F M G PD S + C G + GR + +K
Sbjct: 117 AAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIK 176
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 204/628 (32%), Positives = 340/628 (54%), Gaps = 76/628 (12%)
Query: 79 LHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN----------------- 120
LH +I++ ++ N L+T Y + GR ARRVFD P+
Sbjct: 27 LHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHAR 86
Query: 121 --------------KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG--LRLDHVSFTS 164
+D+VS+NA+++G++ G + A+ ++R G +R ++ ++
Sbjct: 87 LLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHA-RAVRLYHTLLRAGSSVRPSRITMSA 145
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF------- 217
A + LG+Q H +++G+G + VG+ L+ Y+K + GDA +VF
Sbjct: 146 MVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKN 205
Query: 218 --------------------RR----MHDRNVISWTTMISMNRED-----AVSLFKEMRL 248
RR M DR+ I+WTTM++ ++ A++ F+ MR
Sbjct: 206 VVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRF 265
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
G+ + TF ++ A + +++G+ IH I+T++ V + L+ MY++ S++
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKP 325
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGA 367
+E F +SC+ IISW ALI GY QNG S AV+ F + ++ P+ +T GSV+++
Sbjct: 326 AETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISS--C 383
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
A SL+ G + H + GL V +AL+ +YGK GSI ++ R+F+E + +WT
Sbjct: 384 ANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWT 443
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
A+++ A+ G + ++ F++M K V+PD +TF+ VL+ C R G + KG F SM KD
Sbjct: 444 ALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKD 503
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGER 547
+ I P DHY+CM+D+ R GRL+EAEE + Q+P P +LL ACR+ G++E+G+
Sbjct: 504 HGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQW 563
Query: 548 IADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG 607
A+ L++++P SYVL+ +++A KG+W VA LR+GM+ + V+KE G SW + +
Sbjct: 564 AAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSW--IKYKNK 621
Query: 608 LHGFSSGDNTHPRSEEIYRMAECLGSEM 635
+H FS+ D +HP S+ IY E L S+M
Sbjct: 622 VHIFSADDQSHPFSKGIYEKLEWLNSKM 649
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 225/468 (48%), Gaps = 45/468 (9%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD-DALSFALRMNLI----GVVFDAVTYSTALSFCLDH 70
+F ++ D VS+N V++GF A + L L+ V +T S +
Sbjct: 94 LFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASAL 153
Query: 71 EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE------------- 117
G Q H I++ G +VG+ L+ MY++ G + +A+RVFDE
Sbjct: 154 GDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMI 213
Query: 118 ------------------MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH 159
M ++D ++W +++G+TQ+G +A+ M +G+ +D
Sbjct: 214 TGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNG-LESQALNFFRRMRFQGIAIDQ 272
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR 219
+F S +ACG LE GKQIH I+ Y +V VG+ L+ YSKC A FRR
Sbjct: 273 YTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRR 332
Query: 220 MHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
M +N+ISWT +I + E+AV +F EM+ DG+ P+D T +I + + ++EG
Sbjct: 333 MSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEG 392
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
H L + + + +V N L+T+Y + S++D+ ++FDE+ + +SW AL++GYAQ
Sbjct: 393 AQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQF 452
Query: 335 GLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
G + + F ++ K+ KP+ TF VL+A A + K HS G+
Sbjct: 453 GRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVE-KGCSYFHSMQKDHGIVPIDD 511
Query: 394 VGSALLDMYGKRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGDYE 440
+ ++D+Y + G + E++ + W ++SA GD E
Sbjct: 512 HYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDME 559
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 171/330 (51%), Gaps = 11/330 (3%)
Query: 11 DKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFC 67
++A +F + + D ++W T+++GF ++ AL+F RM G+ D T+ + L+ C
Sbjct: 223 EEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTAC 282
Query: 68 LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN 127
G Q+H+ I++ D V+VG+AL+ MYS+ + A F M K+ +SW
Sbjct: 283 GALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWT 342
Query: 128 AILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
A++ GY Q+G EA+ EM R G+ D + S S+C + +LE G Q H +++
Sbjct: 343 ALIVGYGQNG-CSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALV 401
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSL 242
G +++V N L++ Y KC DA+++F M + +SWT +++ ++ + L
Sbjct: 402 SGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDL 461
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEPSVCNCLITMYA 301
F++M V P+ VTFIG++ A S V++G H + + C+I +Y+
Sbjct: 462 FEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYS 521
Query: 302 RFESMQDSEKVFDELSCR-EIISWNALISG 330
R ++++E+ ++ + I W L+S
Sbjct: 522 RSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 6/241 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K A F ++ +I+SW ++ G+ + S++A+ M G+ D
Sbjct: 314 VDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDD 373
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + +S C + G Q H L + GL + V NAL+T+Y + G + +A R+FDE
Sbjct: 374 FTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDE 433
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D VSW A+++GY Q G E I +M+ K ++ D V+F SAC +E
Sbjct: 434 MLFHDQVSWTALVTGYAQFGR-AKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEK 492
Query: 178 G-KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMISMN 235
G H + G ++ YS+ +A + ++M + I W T++S
Sbjct: 493 GCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSAC 552
Query: 236 R 236
R
Sbjct: 553 R 553
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 215/653 (32%), Positives = 354/653 (54%), Gaps = 21/653 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNL--NNPDIVSWNTVLSGFE----KSDDALSF--ALRMNLIG 52
+ +Y K G ++ AL IF N+ + D+VSW+ ++S F +S L+F L+ +
Sbjct: 81 ITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNI 140
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVE- 110
+ + ++ L C + F GL + + ++K G DS V VG ALI M+++ G ++
Sbjct: 141 IYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQS 200
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
AR VFD+M +K+ V+W +++ Y+Q G +A+ ++ D + TS SAC
Sbjct: 201 ARMVFDKMQHKNLVTWTLMITRYSQLGLLD-DAVDLFCRLLVSEYTPDKFTLTSLLSACV 259
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ LGKQ+H I+ G + V VG L+ Y+K ++ K+F M NV+SWT
Sbjct: 260 ELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTA 319
Query: 231 MIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+IS ++A+ LF M V PN TF ++ A + G+ +HG IK
Sbjct: 320 LISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLG 379
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ V N LI MYAR +M+ + K F+ L + +IS+N + N +L + ++F
Sbjct: 380 LSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYN---TAADANAKALDSDESFN 436
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ + A F GAA ++ G++ H+ I+K G ++ + +AL+ MY K
Sbjct: 437 HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKC 496
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G+ + +VFN+ ++ WT+IIS A+HG + F EM GV+P+ +T+++VL
Sbjct: 497 GNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVL 556
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G+I + F+SM ++ I P +HY+CMVD+LGR G L EA E + +P
Sbjct: 557 SACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDAD 616
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
V ++ LG+CR+H N ++GE A +++ EP +Y+L+SNLYA +G W+ VA LRK
Sbjct: 617 ALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKS 676
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
MK K + KE G+SW +V + +H F GD +HP++ +IY + L ++K L
Sbjct: 677 MKQKKLIKETGYSWIEVD--NQVHKFHVGDTSHPQARKIYDELDELALKIKNL 727
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 214/438 (48%), Gaps = 16/438 (3%)
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S L C+ G LH ++ GL + + N+LIT+YS+ G A +F M +
Sbjct: 43 SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102
Query: 121 --KDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+D VSW+AI+S + + + L +++ R + + FT+ +C +
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162
Query: 177 LGKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCEV-TGDANKVFRRMHDRNVISWTTMISM 234
G I +K GY +HV VG L+ ++K + A VF +M +N+++WT MI+
Sbjct: 163 TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222
Query: 235 NRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ DAV LF + + P+ T L+ A G+ +H I++ S+
Sbjct: 223 YSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASD 282
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V L+ MYA+ ++++S K+F+ + ++SW ALISGY Q+ A++ F ++
Sbjct: 283 VFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLH 342
Query: 350 -ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
PN +TF SVL A + D + G++ H IK+GL + VG++L++MY + G++
Sbjct: 343 GHVTPNCFTFSSVLKACASLPDFGI--GKQLHGQTIKLGLSTINCVGNSLINMYARSGTM 400
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+++ FN EK+ ++ A A+ D + N E+E+ GV T+ +L+
Sbjct: 401 ECARKAFNILFEKNLISYNTAADANAKALDSDESFNH--EVEHTGVGASPFTYACLLSGA 458
Query: 469 GRNGMIHKGRHLFDSMLK 486
G I KG + ++K
Sbjct: 459 ACIGTIVKGEQIHALIVK 476
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 173/369 (46%), Gaps = 15/369 (4%)
Query: 131 SGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
S Y Q D E++ I + + + AC NLELGK +H I G
Sbjct: 11 SIYLQAKDLKFESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGL 70
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISWTTMISM---NREDAVSLFKE 245
+ N L++ YSKC +A +FR M H R+++SW+ +IS N ++ +L
Sbjct: 71 PLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTF 130
Query: 246 MRL-----DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC-LITM 299
+ + + + PN+ F L+ + S G I +KT + C LI M
Sbjct: 131 LHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDM 190
Query: 300 YAR-FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYT 357
+ + +Q + VFD++ + +++W +I+ Y+Q GL AV F ++ E P+ +T
Sbjct: 191 FTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFT 250
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
S+L+A E SL G++ HS +I+ GL SD VG L+DMY K ++ S+++FN
Sbjct: 251 LTSLLSACVELEFFSL--GKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNT 308
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
+ +WTA+IS + + + F M + V P+ TF SVL C G
Sbjct: 309 MLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIG 368
Query: 478 RHLFDSMLK 486
+ L +K
Sbjct: 369 KQLHGQTIK 377
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 191/571 (33%), Positives = 321/571 (56%), Gaps = 12/571 (2%)
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
+ALSFC G + H +VK GL S+ +V +LI MY++ G + A RV+D+M +
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSL 177
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
D+ + N ++S Y ++G + V+A +++ G R +H ++++ + CG ++ GKQ+
Sbjct: 178 DAATCNCLISAYARNG-FFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQL 236
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NR 236
H +KM Y + +VGN L++ YSKC + +A VF + RN+ISWT I+ +
Sbjct: 237 HAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDF 296
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
+ A+ F MR G+ PN+ TF ++ + +GRM H IK S V +
Sbjct: 297 KKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAI 356
Query: 297 ITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-N 354
I MY+ M ++EK F ++ +SWNALI+GY N A++AF ++KE N
Sbjct: 357 IDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACN 416
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
+T+ ++ A + SL + HS +IK ++S+ V S+L++ Y + GS+ + +V
Sbjct: 417 EFTYSNIFKACSSFP--SLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQV 474
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F + + +W +II A +++GD + ++M +G +P S TFL+VL+ C +G++
Sbjct: 475 FTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLV 534
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+G+ F SM++DY I+P H SCMVD+LGR G+LE A + + ++ P S+ + LL
Sbjct: 535 QEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLA 594
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
ACR + N++M E +A+ ++ +EP + YV +SN+YAE G W R+ M+ K + KE
Sbjct: 595 ACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKE 654
Query: 595 VGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
G SW +V + ++ F S D HP ++Y
Sbjct: 655 PGCSWIEVN--NKMYKFFSHDKAHPEMPKVY 683
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 278/550 (50%), Gaps = 42/550 (7%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
TY+ A+ G LH+ +V GL Y L++ Y+ G+L AR++FD++
Sbjct: 805 TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
PN + W +L+G + EA+ A EM ++GLR + S ACGH + G
Sbjct: 865 PNTNIRRW-IVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTG 923
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
+ +H V +K + + + + L+ YSKC A +VF + D++++ M+S +
Sbjct: 924 ENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQH 983
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ L ++M+ GV PN V++ LI S +G+
Sbjct: 984 GFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGD----------------------- 1020
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+++ R + E +++SW ++ISG+ QN + AF ++ +
Sbjct: 1021 -KSMVSEVFRLMTANGVEP--------DVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGF 1071
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P++ T S+L A + L+HG+ H + + +G++ D V SAL+DMY K G I E+
Sbjct: 1072 CPSSVTISSLLPACTNVAN--LRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEA 1129
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ +F E++ W ++I A HG + F +ME + D +TF +VL C
Sbjct: 1130 KILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHA 1189
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
GM+ G LF M + Y IEP +HY+CMVD+LGR G+L EA +L+ +P P V +
Sbjct: 1190 GMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGA 1249
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGACR HGN+E+ E A+ L ++EP GS +L+SNLYA+ G W A ++K MK +
Sbjct: 1250 LLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKF 1309
Query: 592 RKEVGFSWAD 601
K G SW +
Sbjct: 1310 GKFPGCSWIE 1319
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 254/526 (48%), Gaps = 52/526 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G+ D A+ +++ + + D + N ++S + ++ A +++ +G +
Sbjct: 155 IDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNH 214
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TYST L+ C G QLH+ +VK SE VGNAL+T+YS+ G + EA VF+
Sbjct: 215 YTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFES 274
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
+ ++ +SW A ++G+ Q GD+ + L MMR+ G+ + +F+ ++CG K+
Sbjct: 275 LRQRNIISWTASINGFYQHGDF--KKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFI 332
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMIS-- 233
G+ H IK G + V VG ++ YS +A K F++M + +SW +I+
Sbjct: 333 DGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGY 392
Query: 234 -MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+N E A+ F M + V N+ T+ + A S + IH IK+N S
Sbjct: 393 VLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNL 452
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + LI Y + S++++ +VF ++S +++SWN++I Y+QNG A+ +I+E
Sbjct: 453 HVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEE 512
Query: 351 -SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+KP + TF +VL+A HS +++ G + F
Sbjct: 513 GNKPTSXTFLTVLSACS-------------HSGLVQEGQE-------------------F 540
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
V + + + E + ++ L R G E+ ++ K++ ++P + + +L C
Sbjct: 541 FKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLT---MKPTASIWRPLLAACR 597
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPS-PDHYSCMVDMLGRVGRLEEAE 514
N + ++ + +L +EP+ Y + +M VGR +AE
Sbjct: 598 YNSNLQMAEYVAEKILD---LEPNDATVYVTLSNMYAEVGRWADAE 640
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 216/457 (47%), Gaps = 57/457 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M+ Y + GQ A +F+ + N +I W + + ++ALS M G+ +
Sbjct: 845 MSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQ 904
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ L C G +H++I+K +S+ Y+ +ALI MYS+ G + +A RVFD
Sbjct: 905 FVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDW 964
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +KD V NA++SGY Q G + EA+ + +M + G++ + VS+
Sbjct: 965 IVDKDLVVMNAMVSGYAQHG-FVHEALBLVQKMQQAGVKPNVVSW--------------- 1008
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH----DRNVISWTTMIS 233
N L++ +S+ ++VFR M + +V+SWT++IS
Sbjct: 1009 --------------------NTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVIS 1048
Query: 234 -----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFL 287
+ + FKEM G CP+ VT L+ A + + NL + G+ IHG +
Sbjct: 1049 GFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANL-RHGKEIHGYAMVIGVE 1107
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ V + L+ MYA+ + +++ +F + R ++WN+LI GYA +G A++ F
Sbjct: 1108 KDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIE-LFNQ 1166
Query: 348 IKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGK 404
++ES K + TF +VLNA A + L G+ + K ++ + ++D+ G+
Sbjct: 1167 MEESDTKLDHLTFTAVLNACSHAGMVEL--GESLFXKMQEKYRIEPRLEHYACMVDLLGR 1224
Query: 405 RGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G + E+ + E +F W A++ A HG+ E
Sbjct: 1225 AGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIE 1261
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 164/353 (46%), Gaps = 45/353 (12%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
MY K G +KA +F+ + + D+V N ++SG+ + +AL +M GV + V+
Sbjct: 948 MYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVS 1007
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++T ++ GF S + + SEV+ RL+ A V
Sbjct: 1008 WNTLIA------GF-------SQVGDKSMVSEVF-------------RLMTANGV----- 1036
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
D VSW +++SG+ Q+ + E A EM+ +G V+ +S AC + NL GK
Sbjct: 1037 EPDVVSWTSVISGFVQNF-HNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGK 1095
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--SMNR- 236
+IHG ++ +G V V + L+ Y+KC +A +F M +RN ++W ++I N
Sbjct: 1096 EIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHG 1155
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+ LF +M + +TF +++A S +V+ G + ++ + EP + +
Sbjct: 1156 YCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXK-MQEKYRIEPRLEH 1214
Query: 295 --CLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNG-LSLAAVQA 343
C++ + R + ++ + + + W AL+ +G + LA V A
Sbjct: 1215 YACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAA 1267
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 116/254 (45%), Gaps = 12/254 (4%)
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
A D +L G+ H+H++ +GL + L+ Y + G + ++++F++ + W
Sbjct: 814 ARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWI 873
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
+ A AR G YE ++ F EM+ +G+RP+ S+L CG G ++ +LK+
Sbjct: 874 VLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKN 933
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGER 547
E S ++ M + G +E+A + I L V+ +++ HG V
Sbjct: 934 -SFESDAYIISALIYMYSKCGHVEKACRVFDWIV-DKDLVVMNAMVSGYAQHGFV---HE 988
Query: 548 IADALMKMEPAGSGSYVLMSNL----YAEKGDWEMVAILRKGMKSKGVRKEVGFSWADV- 602
B + KM+ AG V+ N +++ GD MV+ + + M + GV +V SW V
Sbjct: 989 ALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDV-VSWTSVI 1047
Query: 603 -GDIDGLHGFSSGD 615
G + H D
Sbjct: 1048 SGFVQNFHNHEGFD 1061
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 220/669 (32%), Positives = 346/669 (51%), Gaps = 67/669 (10%)
Query: 40 DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALI 99
D + +M +G D T+ C + G LH+ + + G S V+V NA++
Sbjct: 242 DVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVV 301
Query: 100 TMYSRWGRLVEARRVFDEMPNK---DSVSWNAILSGYTQDGDYGVEAILALIEMM--RKG 154
+MY + G L A +FD++ ++ D VSWN+++S Y D LAL M R
Sbjct: 302 SMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASD--ANTALALFHKMTTRHL 359
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
+ D +S + AC G+Q+HG SI+ G V VGN ++ Y+KC +AN
Sbjct: 360 MSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEAN 419
Query: 215 KVFRRMHDRNVISWTTMIS-----------------MNRE-------------------- 237
KVF+RM ++V+SW M++ M E
Sbjct: 420 KVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRG 479
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNF-LSEP-- 290
+A+ +F++M G PN VT + L+ A +S+G L+ G+ H IK L P
Sbjct: 480 QGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALL-HGKETHCYAIKFILNLDGPDP 538
Query: 291 -----SVCNCLITMYARFESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQA 343
V N LI MYA+ +S + + K+FD +S R++++W +I GYAQ+G + A+Q
Sbjct: 539 GADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQL 598
Query: 344 FFGVIKESK---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALL 399
F G+ K K PN +T L V A +L+ G++ H+++++ S + V + L+
Sbjct: 599 FSGMFKMDKSIKPNDFTLSCAL--VACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLI 656
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K G + +Q VF+ +++ +WT++++ HG E + F EM + PD I
Sbjct: 657 DMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGI 716
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
TFL VL C +GM+ G + F+ M KD+ ++P P+HY+CMVD+ GR GRL EA +L+ +
Sbjct: 717 TFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINE 776
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P P V +LL ACR+H NVE+GE A+ L+++E GSY L+SN+YA W+ V
Sbjct: 777 MPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDV 836
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLN 639
A +R MK G++K G SW + G+ F GD +HP+S++IY L +K +
Sbjct: 837 ARIRYTMKRTGIKKRPGCSW--IQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIG 894
Query: 640 SKRERAIAL 648
+ + AL
Sbjct: 895 YVPQTSFAL 903
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 245/518 (47%), Gaps = 71/518 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN---PDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVV 54
++MY K G A +F++L + D+VSWN+V+S + + DA L+ +M ++
Sbjct: 301 VSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLM 360
Query: 55 F-DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
D ++ L C L G Q+H ++ GL +V+VGNA++ MY++ G++ EA +
Sbjct: 361 SPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANK 420
Query: 114 VFDEMPNKDSVSWNA-----------------------------------ILSGYTQDGD 138
VF M KD VSWNA +++GY Q G
Sbjct: 421 VFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQ 480
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY-------- 190
G EA+ +M G R + V+ S SAC L GK+ H +IK
Sbjct: 481 -GCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPG 539
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISWTTMIS-----MNREDAVSLF 243
+ V N L+ Y+KC+ T A K+F + DR+V++WT MI + +A+ LF
Sbjct: 540 ADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLF 599
Query: 244 KEM-RLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS--VCNCLITM 299
M ++D + PND T + A + ++ GR +H ++ NF V NCLI M
Sbjct: 600 SGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR-NFYGSVMLFVANCLIDM 658
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
Y++ + ++ VFD + R +SW +L++GY +G A++ F + K P+ TF
Sbjct: 659 YSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITF 718
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
VL A + + HG + + K G+D P + ++D++G+ G + E+ ++ NE
Sbjct: 719 LVVLYACSHSGMVD--HGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINE 776
Query: 418 -TQEKSEFAWTAIISALARHGDY---ESVMNQFKEMEN 451
E + W A++SA H + E N+ E+E+
Sbjct: 777 MPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELES 814
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 197/436 (45%), Gaps = 29/436 (6%)
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISWTTM 231
+L K +H SI G H++ L+ TY T A + R+ +V W +
Sbjct: 173 SLAHAKLLHQQSIMQGLLFHLATN--LIGTYIASNSTAYAILLLERLPPSPSSVFWWNQL 230
Query: 232 ISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I + D +L+++M+ G P+ TF + A + + + G +H ++ F
Sbjct: 231 IRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGF 290
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCR---EIISWNALISGYAQNGLSLAAVQA 343
S VCN +++MY + +++ + +FD+L R +++SWN+++S Y + A+
Sbjct: 291 ASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALAL 350
Query: 344 FFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F + P+ + ++L A A+ SL+ G++ H I+ GL D VG+A++DM
Sbjct: 351 FHKMTTRHLMSPDVISLVNILPAC-ASLAASLR-GRQVHGFSIRSGLVDDVFVGNAVVDM 408
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K G + E+ +VF + K +W A+++ ++ G E ++ F+ M + + D +T+
Sbjct: 409 YAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTW 468
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE------ 515
+V+T + G + +F M D P+ ++ VG L +E
Sbjct: 469 TAVITGYAQRGQGCEALDVFRQMC-DCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAI 527
Query: 516 -----LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLY 570
L G PG L V+ L+ + E+ ++ D++ + ++ +M Y
Sbjct: 528 KFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKD-RDVVTWTVMIGGY 586
Query: 571 AEKGDWEMVAILRKGM 586
A+ GD L GM
Sbjct: 587 AQHGDANNALQLFSGM 602
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 209/643 (32%), Positives = 337/643 (52%), Gaps = 16/643 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y KSG A IF++ + +V+W T++ + KS+ DA M+ G D VTY
Sbjct: 84 YVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTY 143
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
T L+ C D E Q H+ IVK G V N L+ Y + G L ARR+F EM
Sbjct: 144 ITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCG 203
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
DSVS+N +++GY +G EAI +EM G + +F + SA + G+Q
Sbjct: 204 WDSVSFNVMITGYANNG-LNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQ 262
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----N 235
IHG +K + +V VGN + YSK + + K+F M + + +S+ +I+
Sbjct: 263 IHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGK 322
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
++++ LF+E++ + F ++ + ++ GR +H + + + V N
Sbjct: 323 VKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNS 382
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
L+ MYA+ ++++++F LS R + W A+IS Q GL ++ F+ + + + +
Sbjct: 383 LVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSAD 442
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
TF VL A I L G++ HS +I+ G + G ALLDMY SI ++ +
Sbjct: 443 QATFACVLKASANLASILL--GKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKT 499
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F E E++ W A++SA A++GD + + F+EM G +PDS++FL +LT C ++
Sbjct: 500 FEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLV 559
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+G F+ M Y++ P +HY+ MVD L R GR +EAE+L+GQ+P P V S+L
Sbjct: 560 EEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLN 619
Query: 535 ACRIHGNVEMGERIADALMKMEP-AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
+CRIH N + + A L M+ + YV MSN++AE G W+ V ++K M+ +GVRK
Sbjct: 620 SCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRK 679
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+SW ++ +H FS+ D+ HP+ EI R E L +M+
Sbjct: 680 LPAYSWVEIK--HKVHVFSANDDKHPQQLEILRKIEMLAEQME 720
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 233/489 (47%), Gaps = 50/489 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y K+G D A +F + D VS+N +++G+ +++A+ + M +G
Sbjct: 182 LDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSD 241
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ +S + + FG Q+H +VK V+VGNA + YS+ + E R++F+E
Sbjct: 242 FTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNE 301
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D VS+N I++ Y G E+I E+ + F + S +L++
Sbjct: 302 MPELDGVSYNVIITAYAWVGKVK-ESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQM 360
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
G+Q+H + V N L+ Y+KC +A+++F R+ R+ + WT MIS N
Sbjct: 361 GRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQ 420
Query: 236 ---REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E+ + LF EMR V + TF ++ A + + G+ +H I++ F++ S
Sbjct: 421 RGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYSG 480
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
C L+ MYA S++D+ K F+E+S R +++WNAL+S YAQNG +++F +I
Sbjct: 481 C-ALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGY 539
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P++ +F +L A H +++ GL DM G
Sbjct: 540 QPDSVSFLCILTACS-------------HCRLVEEGL-------KYFNDMSG-------- 571
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
V+N ++ + TA++ AL R G ++ +M PD I + SVL C
Sbjct: 572 --VYNLAPKREHY--TAMVDALCRSGRFDEAEKLMGQMP---FEPDEIVWTSVLNSC--- 621
Query: 472 GMIHKGRHL 480
IHK L
Sbjct: 622 -RIHKNYAL 629
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 215/446 (48%), Gaps = 50/446 (11%)
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGV- 141
IVK G D N +I S G+L +AR++ D+MPN++S S + I+SGY + G+ V
Sbjct: 34 IVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVA 93
Query: 142 -----------------------------EAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+A EM R G + D+V++ + + C
Sbjct: 94 RRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCN-- 151
Query: 173 KNLELGK---QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
+LE+ K Q H +K+G+ + V N L+ +Y K A ++F M + +S+
Sbjct: 152 -DLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFN 210
Query: 230 TMIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG-NLVKEGRMIHGLCI 282
MI+ +N E+A+ LF EM+ G P+D TF +I A S+G + G+ IHG +
Sbjct: 211 VMITGYANNGLN-EEAIELFVEMQNLGFKPSDFTFAAVISA-SVGLDDTAFGQQIHGFVV 268
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
KT+F+ V N + Y++ + + + K+F+E+ + +S+N +I+ YA G ++
Sbjct: 269 KTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESID 328
Query: 343 AF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
F + N + F ++L+ AA + L+ G++ H+ ++ D D V ++L+D
Sbjct: 329 LFQELQFTTFDRKN-FPFPTMLSI--AASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVD 385
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K G E+ R+F +S WTA+ISA + G +E+ + F EM V D T
Sbjct: 386 MYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQAT 445
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLK 486
F VL I G+ L +++
Sbjct: 446 FACVLKASANLASILLGKQLHSCVIR 471
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 173/354 (48%), Gaps = 15/354 (4%)
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----SMNR-EDAVSLFKEMRLDGVC 252
++++S Y K A ++F +R V++WTTMI NR DA LF EM G
Sbjct: 78 DIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQ 137
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ VT+I L+ + + KE H +K VCN L+ Y + + + ++
Sbjct: 138 PDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRL 197
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
F E+ + +S+N +I+GYA NGL+ A++ F + KP+ +TF +V++A +D
Sbjct: 198 FLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDT 257
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
+ GQ+ H ++K + VG+A LD Y K + E +++FNE E ++ II+
Sbjct: 258 AF--GQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIIT 315
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A A G + ++ F+E++ + F ++L++ + + GR L ++ +
Sbjct: 316 AYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSM-AD 374
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
P + +VDM + G+ EEA+ + + LS ++ I NV+ G
Sbjct: 375 PDFRVSNSLVDMYAKCGKFEEADRIFLR------LSSRSTVPWTAMISANVQRG 422
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 17/197 (8%)
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM----YGKRGSIFESQRVFNETQEKSEF 424
+D+S + GQ C + + LD P S +D+ Y K G++ ++R+F++T E++
Sbjct: 51 KDLS-ERGQLCQARQL---LDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVV 106
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
AWT +I A ++ + F EM G +PD +T++++LT C + + L+ +
Sbjct: 107 AWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCND---LEVAKELYQAH 163
Query: 485 LKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
+ + +H C ++D + G L+ A L ++ G +S + G + N
Sbjct: 164 AQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITG----YANN 219
Query: 543 EMGERIADALMKMEPAG 559
+ E + ++M+ G
Sbjct: 220 GLNEEAIELFVEMQNLG 236
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/653 (30%), Positives = 352/653 (53%), Gaps = 38/653 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ +Y + G F A +F ++ + D V++NT++SG + + AL M G+ D
Sbjct: 185 ITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDC 244
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT S+ L+ C G QLHS + K G+ S+ + +L+ +Y + G + A +F+
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNL 304
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ V WN IL + Q D ++ +M G+R + ++ C ++L
Sbjct: 305 GNRTNVVLWNLILVAFGQINDLA-KSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDL 363
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MN 235
G+QIH +S+K G+ + + V VL+ YSK A +V + +++V+SWT+MI+ +
Sbjct: 364 GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQ 423
Query: 236 RE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E DA++ FKEM+ G+ P+++ I + +++G IH + + + S+
Sbjct: 424 HEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSI 483
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ +YAR ++++ F+E+ ++ I+WN L+SG+AQ+GL A++ F + +
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
K N +TF S L+A +A +K G++ H+ +IK G + VG+AL+ +YGK GS ++
Sbjct: 544 KHNVFTFVSALSA--SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDA 601
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ F+E E++E +W II++ ++HG ++ F +M+ +G+
Sbjct: 602 KMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGLS---------------- 645
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
F SM Y I P PDHY+C++D+ GR G+L+ A++ V ++P V ++
Sbjct: 646 --------YFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRT 697
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL AC++H N+E+GE A L+++EP S SYVL+SN YA G W +RK M+ +GV
Sbjct: 698 LLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGV 757
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
RKE G SW +V ++ +H F GD HP +E+IY + + + K+E+
Sbjct: 758 RKEPGRSWIEVKNV--VHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEK 808
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 161/579 (27%), Positives = 286/579 (49%), Gaps = 17/579 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K+G A +F L+ D VSW +LSG+ ++ ++AL +M+ GVV
Sbjct: 84 IDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTP 143
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ LS C E F G +H+ K G SE +VGNALIT+Y R G A RVF +
Sbjct: 144 YVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYD 203
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP++D+V++N ++SG+ Q +G A+ EM GL D V+ +S +AC +L+
Sbjct: 204 MPHRDTVTFNTLISGHAQCA-HGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQK 262
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G Q+H K G + + L+ Y KC A +F + NV+ W ++
Sbjct: 263 GTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQ 322
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + LF +M+ G+ PN T+ ++ + + G IH L +KT F S+ V
Sbjct: 323 INDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYV 382
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
LI MY+++ ++ + +V + L ++++SW ++I+GY Q+ A+ AF + K
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGI 442
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P+ S ++ G A +++ G + H+ + G D + +AL+++Y + G I E+
Sbjct: 443 WPDNIGLASAIS--GCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREA 500
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
F E + K E W ++S A+ G +E + F M+ GV+ + TF+S L+
Sbjct: 501 FSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANL 560
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
I +G+ + ++K H + + ++ + G+ G E+A+ ++ +S +
Sbjct: 561 AEIKQGKQIHARVIKTGH-SFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNT 618
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLY 570
++ +C HG G D +M+ G + MS+ Y
Sbjct: 619 IITSCSQHGR---GLEALDFFDQMKKEGLSYFKSMSDKY 654
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 230/449 (51%), Gaps = 24/449 (5%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
++H+ + GL + VGN LI +YS+ G ++ ARRVF+E+ +D+VSW A+LSGY Q+G
Sbjct: 63 EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
G EA+ +M R G+ +S S+C + G+ +H K G+ + VG
Sbjct: 123 -LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVG 181
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVC 252
N L++ Y +C A +VF M R+ +++ T+IS + E A+ +F+EM+ G+
Sbjct: 182 NALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLS 241
Query: 253 PNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ VT L+ A S+G+L K G +H K S+ + L+ +Y + ++ +
Sbjct: 242 PDCVTISSLLAACASLGDLQK-GTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALV 300
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAE 369
+F+ + ++ WN ++ + Q LA F ++ + +PN +T+ +L
Sbjct: 301 IFNLGNRTNVVLWNLILVAFGQIN-DLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTG 359
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+I L G++ HS +K G +SD V L+DMY K G + +++RV +EK +WT++
Sbjct: 360 EIDL--GEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSM 417
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG-----RNGMIHKGRHLFDSM 484
I+ +H + + FKEM+ G+ PD+I S ++ C R G+ R
Sbjct: 418 IAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGY 477
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
D I ++ +V++ R GR+ EA
Sbjct: 478 SGDVSI------WNALVNLYARCGRIREA 500
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 195/403 (48%), Gaps = 15/403 (3%)
Query: 123 SVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASAC-GHEKNLELGKQ 180
S+ W+ L+G+ D +L+L + R+ L + F A AC G+ + ++ +
Sbjct: 8 SLGWS--LAGFLAQEDPA--KVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPE 63
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR---- 236
IH +I G G VGN+L+ YSK + A +VF + R+ +SW M+S
Sbjct: 64 IHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 237 -EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
E+A+ L+++M GV P ++ + + L +GR +H K F SE V N
Sbjct: 124 GEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNA 183
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
LIT+Y R S + +E+VF ++ R+ +++N LISG+AQ A++ F + P+
Sbjct: 184 LITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPD 243
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
T S+L A + D L+ G + HS++ K G+ SD I+ +LLD+Y K G + + +
Sbjct: 244 CVTISSLLAACASLGD--LQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
FN + W I+ A + D F +M+ G+RP+ T+ +L C G I
Sbjct: 302 FNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEI 361
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
G + +K E ++DM + G LE+A ++
Sbjct: 362 DLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYGWLEKARRVL 403
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+ I GL D IVG+ L+D+Y K G + ++RVF E + +W A++S A++G
Sbjct: 65 HAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD------------ 487
E + +++M GV P SVL+ C + + +GR + K
Sbjct: 125 EEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNAL 184
Query: 488 ----------------YHIEPSPD--HYSCMVDMLGRVGRLEEAEELVGQIPG---GPGL 526
++ P D ++ ++ + E A E+ ++ P
Sbjct: 185 ITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDC 244
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMS----NLYAEKGDWEMVAIL 582
+ SLL AC G+++ G ++ L K AG S +M +LY + GD E ++
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFK---AGMSSDYIMEGSLLDLYVKCGDVETALVI 301
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 229/717 (31%), Positives = 352/717 (49%), Gaps = 78/717 (10%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y G AL + + V WN ++ K D A+ + RM G D T
Sbjct: 93 YLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTL 152
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
AL C + + G LH LI G +S V+V NAL+ MYSR G L +A VFDE+
Sbjct: 153 PYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITR 212
Query: 121 K---DSVSWNAILSGYTQDGDYGVEAILALIEM------MRKGLRLDHVSFTSAASACGH 171
K D +SWN+I++ + + G A+ EM R D +S + AC
Sbjct: 213 KGIDDVISWNSIVAAHVK-GSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACAS 271
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
K L K+IH +I+ G V N L+ TY+KC DA KVF M ++V+SW M
Sbjct: 272 LKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAM 331
Query: 232 IS-----------------MNRE-----------------------DAVSLFKEMRLDGV 251
++ M +E +A+ F++M LDG
Sbjct: 332 VTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGS 391
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS------------VCNCLITM 299
PN VT I L+ A + + +G IH +K LS + V N LI M
Sbjct: 392 EPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDM 451
Query: 300 YARFESMQDSEKVFDELSCRE--IISWNALISGYAQNGLSLAAVQAFFGVIKES---KPN 354
Y++ S + + +FD + RE +++W +I GYAQ G S A++ F +I + PN
Sbjct: 452 YSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPN 511
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP---IVGSALLDMYGKRGSIFES 411
AYT +L A A +L+ G++ H+++ + + +P V + L+DMY K G + +
Sbjct: 512 AYTISCILMA--CAHLAALRMGKQIHAYVTR-HHEYEPSVYFVANCLIDMYSKCGDVDTA 568
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VF+ +++E +WT+++S HG + ++ F +M+ G PD I+FL +L C +
Sbjct: 569 RNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHS 628
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
GM+ +G + FD M +DY + S +HY+C++D+L R GRL++A + + ++P P + +
Sbjct: 629 GMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVA 688
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACR+H NVE+ E + L+ M+ GSY L+SN+YA W+ VA +R+ MK G+
Sbjct: 689 LLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGI 748
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+K G SW V G F GD +HP S EIY + E L +K + E AL
Sbjct: 749 KKRPGCSW--VQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFAL 803
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 136/533 (25%), Positives = 244/533 (45%), Gaps = 74/533 (13%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+G ++ Y G +A V + + +V WN ++ + ++G AI M+R
Sbjct: 85 LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLD-RAIGVSCRMLRA 143
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G + DH + A ACG + G+ +HG+ G+ ++V V N L++ YS+C DA
Sbjct: 144 GTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDA 203
Query: 214 NKVFRRMHDR---NVISWTTMISM-----NREDAVSLFKEMRL------DGVCPNDVTFI 259
+ VF + + +VISW ++++ N A+ LF EM + + ++ +
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIV 263
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
++ A + + + + IH I+ ++ VCN LI YA+ SM D+ KVF+ + +
Sbjct: 264 NILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFK 323
Query: 320 EIISWNAL-----------------------------------ISGYAQNGLSLAAVQAF 344
+++SWNA+ I+GYAQ G S A+ AF
Sbjct: 324 DVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAF 383
Query: 345 FGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS------------D 391
+I + S+PN+ T S+L+A + +L G H++ +K L S D
Sbjct: 384 QQMILDGSEPNSVTIISLLSACASLG--ALSQGMEIHAYSLKKCLLSLDNDFGGDGDGED 441
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNET--QEKSEFAWTAIISALARHGDYESVMNQFKEM 449
+V +AL+DMY K S ++ +F+ +E++ WT +I A++GD + F EM
Sbjct: 442 LMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEM 501
Query: 450 ENK--GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS-CMVDMLGR 506
+K V P++ T +L C + G+ + + + + EPS + C++DM +
Sbjct: 502 ISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSK 561
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
G ++ A + +P +S S++ +HG G+ D KM+ AG
Sbjct: 562 CGDVDTARNVFDSMPKRNEVS-WTSMMSGYGMHGR---GKEALDIFDKMQKAG 610
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 143/547 (26%), Positives = 236/547 (43%), Gaps = 101/547 (18%)
Query: 3 MYCKSGQFDKALCIFNNLNNP---DIVSWNTVLSGFEKSDD---ALSFALRMNLI----- 51
MY + G + A +F+ + D++SWN++++ K + AL M++I
Sbjct: 193 MYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKA 252
Query: 52 -GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
D ++ L C + ++HS ++ G ++ +V NALI Y++ G + +
Sbjct: 253 TNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMND 312
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGV----------------------------- 141
A +VF+ M KD VSWNA+++GYTQ G++G
Sbjct: 313 AVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQ 372
Query: 142 -----EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK--------- 187
EA+ A +M+ G + V+ S SAC L G +IH S+K
Sbjct: 373 RGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDND 432
Query: 188 ---MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISWTTMIS-----MNRE 237
G G + V N L+ YSKC A +F + +RNV++WT MI +
Sbjct: 433 FGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSN 492
Query: 238 DAVSLFKEM--RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS---V 292
DA+ +F EM + V PN T ++ A + ++ G+ IH + + EPS V
Sbjct: 493 DALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAY-VTRHHEYEPSVYFV 551
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
NCLI MY++ + + VFD + R +SW +++SGY +G A+ F + K
Sbjct: 552 ANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGF 611
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL--------DSDPIVGSA-----L 398
P+ +F +L A HS ++ GL D D +V SA +
Sbjct: 612 VPDDISFLVLLYACS-------------HSGMVDQGLNYFDIMRRDYD-VVASAEHYACV 657
Query: 399 LDMYGKRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
+D+ + G + ++ + E E S W A++SA H + E ++ N D
Sbjct: 658 IDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAEND 717
Query: 458 -SITFLS 463
S T +S
Sbjct: 718 GSYTLIS 724
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 176/393 (44%), Gaps = 64/393 (16%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----------------------- 37
++ Y K G + A+ +FN + D+VSWN +++G+ +
Sbjct: 301 IDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDV 360
Query: 38 ---------------SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSL 82
S +AL +M L G ++VT + LS C G+++H+
Sbjct: 361 ITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAY 420
Query: 83 IVKFGLDS------------EVYVGNALITMYSRWGRLVEARRVFDEMPNKDS--VSWNA 128
+K L S ++ V NALI MYS+ AR +FD +P ++ V+W
Sbjct: 421 SLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTV 480
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA--SACGHEKNLELGKQIHG-VS 185
++ GY Q GD +A+ EM+ K + ++T + AC H L +GKQIH V+
Sbjct: 481 MIGGYAQYGDSN-DALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVT 539
Query: 186 IKMGYGTHVS-VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDA 239
Y V V N L+ YSKC A VF M RN +SWT+M+S ++A
Sbjct: 540 RHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEA 599
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT-NFLSEPSVCNCLIT 298
+ +F +M+ G P+D++F+ L++A S +V +G + + + ++ C+I
Sbjct: 600 LDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVID 659
Query: 299 MYARFESMQDSEKVFDELSCR-EIISWNALISG 330
+ AR + + K E+ + W AL+S
Sbjct: 660 LLARCGRLDKAWKTIQEMPMEPSAVIWVALLSA 692
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 162/340 (47%), Gaps = 14/340 (4%)
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFK 244
Y + S+G ++++Y C T DA V R+ + W ++ + ++ A+ +
Sbjct: 79 YVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSC 138
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
M G P+ T + A GR +HGL F S VCN L+ MY+R
Sbjct: 139 RMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCG 198
Query: 305 SMQDSEKVFDELSCR---EIISWNALISGYAQNGLSLAAVQAFFG---VIKESKPNAYT- 357
S++D+ VFDE++ + ++ISWN++++ + + A++ F ++ E N +
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSD 258
Query: 358 FGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
S++N + A + +L + HS+ I+ G +D V +AL+D Y K GS+ ++ +VFN
Sbjct: 259 IISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFN 318
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
+ K +W A+++ + G++ + F+ M + + D IT+ +V+ + G +
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQE 378
Query: 477 GRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
F M+ D EP+ ++ +G L + E+
Sbjct: 379 ALDAFQQMILDGS-EPNSVTIISLLSACASLGALSQGMEI 417
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNL--NNPDIVSWNTVLSGFEK---SDDALSFALRM--NLIGV 53
++MY K F A IF+++ ++V+W ++ G+ + S+DAL M V
Sbjct: 449 IDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAV 508
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVY-VGNALITMYSRWGRLVEA 111
+A T S L C G Q+H+ + + + VY V N LI MYS+ G + A
Sbjct: 509 APNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTA 568
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
R VFD MP ++ VSW +++SGY G G EA+ +M + G D +SF AC H
Sbjct: 569 RNVFDSMPKRNEVSWTSMMSGYGMHGR-GKEALDIFDKMQKAGFVPDDISFLVLLYACSH 627
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGN--VLMSTYSKCEVTGDANKVFRRMH-DRNVISW 228
++ G + ++ Y S + ++ ++C A K + M + + + W
Sbjct: 628 SGMVDQGLNYFDI-MRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIW 686
Query: 229 TTMISMNR 236
++S R
Sbjct: 687 VALLSACR 694
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/645 (31%), Positives = 351/645 (54%), Gaps = 15/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN-PDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
++ Y K G+ +A +F L + +IV+WN ++ GF ++ +++L + L V
Sbjct: 181 IDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVV 240
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ +++ LS C E FG Q+H +K G + + YV +L+TMY + + A +VF+
Sbjct: 241 SSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFN 300
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E+P+K+ WNA++S Y +G Y +A+ +M + D + + ++ +
Sbjct: 301 EVPDKEIELWNALISAYVGNG-YAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYD 359
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
LG+ IH +K + +++ + L++ YSK + AN +F M +R+V++W ++IS
Sbjct: 360 LGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFC 419
Query: 234 MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
NR+ +A+ F+ M D V P+ +I A + V G IHG IK+ +
Sbjct: 420 QNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVF 479
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + L+ MY++F + + +F ++ + +++WN++IS Y +N L ++ F V++
Sbjct: 480 VASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRND 539
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P++ +F SVL A+ + +L G+ H +++++ + D V + L+DMY K G +
Sbjct: 540 LYPDSVSFTSVLAAISSVA--ALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKY 597
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+Q +F EK+ AW ++I HG+ + F EM + G++PD +TFLS+L+ C
Sbjct: 598 AQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNH 657
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G+I +G HLF+ M + IEP +HY +VD+ GR G L +A V +P P S+
Sbjct: 658 SGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWL 717
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLL +C+IH N+E+GE +A+ L+ MEP+ +YV + NLY E W+ A LR MK KG
Sbjct: 718 SLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKG 777
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
++K G SW +V + + F SGD + P + EIY L M
Sbjct: 778 LKKTPGCSWIEVR--NKVDVFYSGDCSSPITTEIYDTLSSLKRNM 820
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 149/570 (26%), Positives = 277/570 (48%), Gaps = 46/570 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-----DIVSWNTVLSGFEKSDDALSFALRMNLIGVVF 55
+N+Y K G F A+ +F+ L D+ WN+++ G+ + F
Sbjct: 95 INIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFR-----------------F 137
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ + G+ G Q+HS IV+ L+ + ++ ALI Y + GR EAR +F
Sbjct: 138 GQLEEGMVQFGRMQSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLF 197
Query: 116 DEMPNKDS-VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
++ ++ + V+WN ++ G+ ++G + ++ + + +++ SFT SACG +
Sbjct: 198 KKLKDRSNIVAWNVMIGGFGENGLWE-NSLEYYLLAKTENVKVVSSSFTCTLSACGQGEF 256
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
+ GKQ+H +IK+G+ V L++ Y KC++ A KVF + D+ + W +IS
Sbjct: 257 VSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISA 316
Query: 235 -----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
DA+ ++K+M+L V + T + ++ + S+ L GR+IH +K S
Sbjct: 317 YVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSS 376
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
++ + L+TMY++F + +F + R++++W ++ISG+ QN A+ FF ++
Sbjct: 377 ITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALD-FFRAME 435
Query: 350 ES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
KP++ S+++A E + L G H +IK GL D V S+LLDMY K G
Sbjct: 436 ADLVKPDSDIMASIISACTGLEKVDL--GCTIHGFVIKSGLQLDVFVASSLLDMYSKFGF 493
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +F++ K+ AW +IIS R+ + +N F ++ + PDS++F SVL
Sbjct: 494 PERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAA 553
Query: 468 CGRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+ KG+ + +++ D +E + ++DM + G L+ A+ + +I
Sbjct: 554 ISSVAALLKGKSVHGYLVRLWIPFDLQVENT------LIDMYIKCGLLKYAQHIFERI-S 606
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADAL 552
L S++G HG + D +
Sbjct: 607 EKNLVAWNSMIGGYGSHGECSKAIELFDEM 636
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 230/479 (48%), Gaps = 44/479 (9%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
TY + L C +G +HS I+ GL S+ Y+ ++LI +Y + G +A +VFD++
Sbjct: 55 TYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQL 114
Query: 119 PNK-----DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
P D WN+I+ GY + G + +G+ V F S+ G+++
Sbjct: 115 PKSGVSVDDVTIWNSIIDGYFRFGQ------------LEEGM----VQFGRMQSS-GYKE 157
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMI 232
GKQIH ++ + L+ TY KC +A +F+++ DR N+++W MI
Sbjct: 158 ----GKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMI 213
Query: 233 -----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ E+++ + + + V +F + A G V G+ +H IK F
Sbjct: 214 GGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFE 273
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+P V L+TMY + + ++ +EKVF+E+ +EI WNALIS Y NG + A++ +
Sbjct: 274 DDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIY--- 330
Query: 348 IKESK-----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
K+ K +++T +VL + A L G+ H+ I+K L S + SALL MY
Sbjct: 331 -KQMKLCTVLSDSFTILNVLTSSSMAGLYDL--GRLIHTEIVKRPLQSSITIQSALLTMY 387
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K G + +F+ +E+ AW ++IS ++ Y+ ++ F+ ME V+PDS
Sbjct: 388 SKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMA 447
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
S+++ C + G + ++K ++ S ++DM + G E A + +P
Sbjct: 448 SIISACTGLEKVDLGCTIHGFVIKS-GLQLDVFVASSLLDMYSKFGFPERAGNIFSDMP 505
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 212/682 (31%), Positives = 361/682 (52%), Gaps = 53/682 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS-----GFEKSDDALSFALRMNLIGVVF 55
+N Y K +A +F+ + + D+V+WN++ S GF + L+ M L GV
Sbjct: 183 VNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQK--GLNVFREMVLDGVKP 240
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D VT S LS C D + G +H +K G+ V+V NAL+ +Y + EA+ VF
Sbjct: 241 DPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVF 300
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D MP+++ ++WN++ S Y G + + + EM G++ D ++ +S AC K+L
Sbjct: 301 DLMPHRNVITWNSLASCYVNCG-FPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDL 359
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+ GK IHG ++K G V V L++ Y+ C +A VF M RNV++W ++ S
Sbjct: 360 KSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCY 419
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +++F+EM L+GV P+ VT + ++HA S +K G++IHG ++ + +
Sbjct: 420 VNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDV 479
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN-----GLSLAA----- 340
VCN L+++YA+ +++++ VFD + RE+ SWN +++ Y N GL + +
Sbjct: 480 FVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRD 539
Query: 341 -VQA--------FFGVIKES-----------------KPNAYTFGSVLNAVGAAEDISLK 374
V+A G +K S KP+ T S+L A +E L+
Sbjct: 540 EVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSE--CLR 597
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G+ H ++ + D D +AL+DMY K G + S+ VF+ K F+W +I A
Sbjct: 598 MGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANG 657
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
HG+ + ++ F++M V+PDS TF VL+ C + ++ +G +F+SM +D+ +EP
Sbjct: 658 MHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEA 717
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
+HY+C+VD+ R G LEEA + ++P P ++ L CR++ NVE+ + A L +
Sbjct: 718 EHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFE 777
Query: 555 MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSG 614
++P GS +YV + N+ W + +RK MK +G+ K G SW VG + +H F +G
Sbjct: 778 IDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVG--NRVHTFVAG 835
Query: 615 DNTHPRSEEIYRMAECLGSEMK 636
D ++ S++IY + L +++K
Sbjct: 836 DKSNMESDKIYNFLDELFAKIK 857
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/480 (30%), Positives = 251/480 (52%), Gaps = 16/480 (3%)
Query: 16 IFNNLNNPDIVSWNT-----VLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDH 70
+F++L D+V+WN+ V GF + L+ +M L V + +T S+ L C D
Sbjct: 97 VFDDLVARDVVTWNSLSACYVNCGFPQQ--GLNVFRKMGLNKVKANPLTVSSILPGCSDL 154
Query: 71 EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL 130
+ G ++H +V+ G+ +V+V +A + Y++ + EA+ VFD MP++D V+WN++
Sbjct: 155 QDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLS 214
Query: 131 SGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
S Y G + + + EM+ G++ D V+ + SAC ++L+ GK IHG ++K G
Sbjct: 215 SCYVNCG-FPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGM 273
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKE 245
+V V N L++ Y C +A VF M RNVI+W ++ S + +++F+E
Sbjct: 274 VENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFRE 333
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
M L+GV P+ + ++ A S +K G+ IHG +K + + VC L+ +YA
Sbjct: 334 MGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLC 393
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTFGSVLNA 364
+++++ VFD + R +++WN+L S Y G + F V+ KP+ T S+L+A
Sbjct: 394 VREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHA 453
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+D LK G+ H ++ G+ D V +ALL +Y K + E+Q VF+ +
Sbjct: 454 CSDLQD--LKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVA 511
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+W I++A + +YE + F +M V+ D IT+ V+ C +N I + +F M
Sbjct: 512 SWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKM 571
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 235/482 (48%), Gaps = 22/482 (4%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
G+ D + C L Q H + G+ S+V +GNA I Y + + A
Sbjct: 35 GIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGA 94
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
RRVFD++ +D V+WN++ + Y G + + + +M ++ + ++ +S C
Sbjct: 95 RRVFDDLVARDVVTWNSLSACYVNCG-FPQQGLNVFRKMGLNKVKANPLTVSSILPGCSD 153
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
++L+ GK+IHG ++ G V V + ++ Y+KC +A VF M R+V++W ++
Sbjct: 154 LQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSL 213
Query: 232 ISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
S + +++F+EM LDGV P+ VT ++ A S +K G+ IHG +K
Sbjct: 214 SSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGM 273
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALIS-----GYAQNGLSLAAV 341
+ V N L+ +Y +++++ VFD + R +I+WN+L S G+ Q GL++
Sbjct: 274 VENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFRE 333
Query: 342 QAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
GV KP+ S+L A +D LK G+ H +K G+ D V +AL+++
Sbjct: 334 MGLNGV----KPDPMAMSSILPACSQLKD--LKSGKTIHGFAVKHGMVEDVFVCTALVNL 387
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y + E+Q VF+ ++ W ++ S G + +N F+EM GV+PD +T
Sbjct: 388 YANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTM 447
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQ 519
LS+L C + G+ + ++ +E D + C ++ + + + EA+ +
Sbjct: 448 LSILHACSDLQDLKSGKVIHGFAVRHGMVE---DVFVCNALLSLYAKCVCVREAQVVFDL 504
Query: 520 IP 521
IP
Sbjct: 505 IP 506
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 188/388 (48%), Gaps = 13/388 (3%)
Query: 142 EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLM 201
EAI +G++ D F + A AC ++ KQ H + + G + VS+GN +
Sbjct: 23 EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVCPNDV 256
Y KC+ A +VF + R+V++W ++ + + +++F++M L+ V N +
Sbjct: 83 HAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPL 142
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T ++ S +K G+ IHG ++ + + V + + YA+ +++++ VFD +
Sbjct: 143 TVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLM 202
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKH 375
R++++WN+L S Y G + F ++ + KP+ T +L+A +D LK
Sbjct: 203 PHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD--LKS 260
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G+ H +K G+ + V +AL+++Y + E+Q VF+ ++ W ++ S
Sbjct: 261 GKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVN 320
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
G + +N F+EM GV+PD + S+L C + + G+ + +K +E D
Sbjct: 321 CGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVE---D 377
Query: 496 HYSC--MVDMLGRVGRLEEAEELVGQIP 521
+ C +V++ + EA+ + +P
Sbjct: 378 VFVCTALVNLYANCLCVREAQTVFDLMP 405
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 204/612 (33%), Positives = 346/612 (56%), Gaps = 21/612 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNL-IGVVFDAVTYSTALSFCLDHE 71
+F+ + D+VSWN+V+ F +A+ MNL G + V+ + L C E
Sbjct: 64 VFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLE 123
Query: 72 GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
+ G Q+H +VK GLDS+V VGNAL+ +Y + G + ++RRVFDE+ ++ VSWNAI++
Sbjct: 124 DGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIIT 183
Query: 132 --GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
Y + +E +I+ G++ + V+F+S K + GK+IHG S++ G
Sbjct: 184 SLAYLERNQDALEMFRLMID---GGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFG 240
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFK 244
+ + V N L+ Y+K + A+ VF ++ ++N++SW M++ NR + AV L +
Sbjct: 241 LESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVR 300
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
+M+ DG PN VTF ++ A + ++ G+ IH I+T + V N L MYA+
Sbjct: 301 QMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCG 360
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLN 363
+ + +VF ++S R+ +S+N LI GY+Q +++ F + IK K + ++ V++
Sbjct: 361 CLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVIS 419
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
A A +LK G+ H ++ L + + +ALLD Y K G I + +VF + +
Sbjct: 420 A--CANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDT 477
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
+W ++I G+ +N F+ M+ GV DS+++++VL+ C G++ +G+ F+
Sbjct: 478 ASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEH 537
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
M + +I+P+ HY+CMVD+LGR G +EEA +L+ +P P +V +LLGACRIHG +E
Sbjct: 538 M-QVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIE 596
Query: 544 MGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG 603
+ A+ L K++P SG Y ++SN+YAE G W+ +RK MKS+G +K G SW +
Sbjct: 597 LAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQID 656
Query: 604 DIDGLHGFSSGD 615
+ +H F +G+
Sbjct: 657 --NQVHAFVAGE 666
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 151/478 (31%), Positives = 251/478 (52%), Gaps = 12/478 (2%)
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
+GV D T+ L C D G ++H ++ K G DS+V+VGN L+ Y G L +
Sbjct: 1 MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKD 60
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEM-MRKGLRLDHVSFTSAASAC 169
+RVFDEM +D VSWN+++ ++ G Y EAI EM +R G R + VS S C
Sbjct: 61 VKRVFDEMLERDVVSWNSVIGVFSVHGFYA-EAIHLFCEMNLRSGFRPNMVSIVSVLPVC 119
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
++ G+QIH +K G + V+VGN L+ Y KC D+ +VF + +RN +SW
Sbjct: 120 AGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWN 179
Query: 230 TMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
+I+ +DA+ +F+ M GV PN VTF ++ + L G+ IHG ++
Sbjct: 180 AIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRF 239
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
S+ V N LI MYA+ + VF+++ + I+SWNA+++ +AQN L LAAV
Sbjct: 240 GLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLV 299
Query: 345 FGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + + PN+ TF +VL A A L+ G+ H+ I+ G D V +AL DMY
Sbjct: 300 RQMQADGEIPNSVTFTNVLPA--CARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYA 357
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G + ++RVF + + E ++ +I ++ + + F EM KG++ D ++++
Sbjct: 358 KCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMG 416
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
V++ C + +G+ + ++ H+ + ++D + GR++ A ++ QIP
Sbjct: 417 VISACANLAALKQGKEVHGLAVRK-HLHTHLFIANALLDFYIKCGRIDLAGKVFRQIP 473
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 203/378 (53%), Gaps = 24/378 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY KSG+ +A +FN + +IVSWN +++ F ++ A+ +M G + ++
Sbjct: 252 IDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNS 311
Query: 58 VTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT++ L C GFL G ++H+ ++ G +++V NAL MY++ G L ARRVF
Sbjct: 312 VTFTNVLPAC-ARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF- 369
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
++ +D VS+N ++ GY+Q + E++ +EM KG++LD VS+ SAC + L+
Sbjct: 370 KISLRDEVSYNILIIGYSQTTNCS-ESLRLFLEMGIKGMKLDVVSYMGVISACANLAALK 428
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---S 233
GK++HG++++ TH+ + N L+ Y KC A KVFR++ R+ SW +MI
Sbjct: 429 QGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYG 488
Query: 234 MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
M E A++LF+ M+ DGV + V++I ++ A S G LV+EG+ N
Sbjct: 489 MLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQM 548
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIIS-WNAL-----ISGYAQNGLSLAAVQAFF 345
C++ + R ++++ K+ + L + W AL I GY + L+ A + F
Sbjct: 549 HYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIE--LAHWAAEHLF 606
Query: 346 GVIKESKPNAYTFGSVLN 363
+ KP + SVL+
Sbjct: 607 KL----KPQHSGYYSVLS 620
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 213/656 (32%), Positives = 360/656 (54%), Gaps = 28/656 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLN---NPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVV 54
+++Y KSG KA +F + D+VSW+ +++ F + DA+ + +G+V
Sbjct: 104 ISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLV 163
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVE-AR 112
+ Y+ + C + + G + ++K G +S+V VG +LI M+ + E A
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+VFD+M + V+W +++ Q G + EAI ++M+ G D + +S SAC
Sbjct: 224 KVFDKMSELNVVTWTLMITRCMQMG-FPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG---DANKVFRRMHDRNVISWT 229
+NL LG+Q+H +I+ G V L+ Y+KC G D KVF RM D +V+SWT
Sbjct: 283 ENLSLGRQLHSWAIRSGLADDVECS--LVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWT 340
Query: 230 TMISMNRE------DAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
+I+ + +A++LF EM G V PN TF A + + G+ + G
Sbjct: 341 ALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAF 400
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K S SV N +I+M+ + + M+D+ F+ LS + ++S+N + G +N L
Sbjct: 401 KRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRN-LDFEHAF 459
Query: 343 AFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
I E + +A+TF S+L+ G A SL+ G++ HS ++K+GL + V +AL+
Sbjct: 460 ELLSEIAERELGVSAFTFASLLS--GVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALIS 517
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K GSI + RVF+ ++ +WT++I+ A+HG E V+ F +M +GV+P+ +T
Sbjct: 518 MYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVT 577
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
++++L+ C G++ +G F+SM +D+ I+P +HY+CMVD+L R G L +A E + +
Sbjct: 578 YVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTM 637
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVA 580
P + V ++ LGACR+H N E+G+ A +++ +P +Y+ +SN+YA G WE
Sbjct: 638 PFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEEST 697
Query: 581 ILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+R+ MK + + KE G SW +VG D +H F GD +HP + +IY + L +E+K
Sbjct: 698 EMRRKMKERNLVKEGGCSWIEVG--DKVHKFYVGDTSHPNAHQIYDELDWLITEIK 751
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 258/522 (49%), Gaps = 30/522 (5%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D+VT+S+ L C+ F G +H+ +++F ++ + + N+LI++YS+ G L +A+ VF
Sbjct: 61 DSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVF 120
Query: 116 DEM---PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+ M +D VSW+A+++ + +G +AI +E + GL + +T+ AC +
Sbjct: 121 ETMGRFGKRDVVSWSAMMACFGNNGR-EFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNS 179
Query: 173 KNLELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVT-GDANKVFRRMHDRNVISWTT 230
+ +G+ I G +K G + + V VG L+ + K E + +A KVF +M + NV++WT
Sbjct: 180 DFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 231 MISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MI+ + +A+ F +M L G + T + A + + GR +H I++
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSG 299
Query: 286 FLSEPSVCNCLITMYARFE---SMQDSEKVFDELSCREIISWNALISGYAQN-GLSLAAV 341
L++ C+ L+ MYA+ S+ D KVFD + ++SW ALI+GY QN L+ A+
Sbjct: 300 -LADDVECS-LVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAI 357
Query: 342 QAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F +I + +PN +TF S A G D + G++ H K GL S+ V ++++
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRV--GKQVLGHAFKRGLASNSSVSNSVI 415
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
M+ K + +++ F EK+ ++ + R+ D+E E+ + + +
Sbjct: 416 SMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAF 475
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELV 517
TF S+L+ G + KG + +LK + S + C ++ M + G ++ A +
Sbjct: 476 TFASLLSGVANVGSLRKGEQIHSQVLK---LGLSCNQPVCNALISMYSKCGSIDTASRVF 532
Query: 518 GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+ +S + G + HG ER+ + +M G
Sbjct: 533 SLMDNRNVISWTSMITGFAK-HG---FAERVLETFNQMTKEG 570
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 187/361 (51%), Gaps = 21/361 (5%)
Query: 143 AILALIEMMRKGLR-LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLM 201
A+ AL M R G+R +D V+F+S +C ++ LGK +H I+ + N L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLI 104
Query: 202 STYSKCEVTGDANKVFR---RMHDRNVISWTTMISM----NRE-DAVSLFKEMRLDGVCP 253
S YSK A VF R R+V+SW+ M++ RE DA+ LF E G+ P
Sbjct: 105 SLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVP 164
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKT-NFLSEPSVCNCLITMYARFE-SMQDSEK 311
ND + +I A S + V GR+I G +KT +F S+ V LI M+ + E S +++ K
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTFGSVLNAVGAAED 370
VFD++S +++W +I+ Q G A++ F V+ + + +T SV +A E+
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK---RGSIFESQRVFNETQEKSEFAWT 427
+SL G++ HS I+ GL D V +L+DMY K GS+ + ++VF+ Q+ S +WT
Sbjct: 285 LSL--GRQLHSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWT 340
Query: 428 AIISALARHGDYES-VMNQFKEMENKG-VRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
A+I+ ++ + + +N F EM +G V P+ TF S CG G+ +
Sbjct: 341 ALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAF 400
Query: 486 K 486
K
Sbjct: 401 K 401
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 220/665 (33%), Positives = 360/665 (54%), Gaps = 27/665 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN-PDIVSWNTV---LSGFEKSDDALSFALRMNLIGVVFD 56
+ MY K G A +F+ + D+VSW + L+ +AL M G+ +
Sbjct: 86 LTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPN 145
Query: 57 AVTYSTALSFCLDHEGFLF-GLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRV 114
A T A C E F G + +K G ++V VG ALI M++R G LV AR+V
Sbjct: 146 AFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKV 205
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F+ + + V W +++ Y Q G G +A+ + M+ G D + +S SAC + +
Sbjct: 206 FNGLVERTVVVWTLMITRYVQGGCAG-KAVELFLGMLEDGFEPDGYTMSSMVSACAEQGS 264
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD---ANKVFRRMHDRNVISWTTM 231
LG+Q+H + +++G + V L+ Y+K ++ A KVF+RM NV+SWT +
Sbjct: 265 AGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTAL 324
Query: 232 ISM------NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
IS +AV L EM + + PN +T+ L+ A + + GR IH +KT+
Sbjct: 325 ISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTS 384
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ V N L++MYA M+++ K FD+L R ++S ++ I ++ S ++
Sbjct: 385 IGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESM 444
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
V + +TF S+L+A A + L GQ+ H+ IK G +SD + ++L+ MY +
Sbjct: 445 DV----GVSTFTFASLLSA---AATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSR 497
Query: 405 RGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
G + ++ R F+E ++ +WT+IISALA+HG E ++ F +M GV+P+ +T+++
Sbjct: 498 CGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIA 557
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL+ C G++ +G+ F SM KD+ + P +HY+CMVD+L R G ++EA E + ++P
Sbjct: 558 VLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCK 617
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
V ++LLGACR + N+E+GE A ++ +EP YVL+SNLYA G W+ VA +R
Sbjct: 618 ADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIR 677
Query: 584 KGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
M+ + + KE G SW VG+ +H F +GD +HPR++EIY L E+K + +
Sbjct: 678 SLMRHRNLSKETGLSWMHVGNT--IHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPD 735
Query: 644 RAIAL 648
+I L
Sbjct: 736 TSIVL 740
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 236/469 (50%), Gaps = 22/469 (4%)
Query: 88 LDSEVYVGNALITMYSRWGRLVEARRVFDEMPN-KDSVSWNAILSGYTQDGDYGVEAILA 146
LD++ V N+L+TMYS+ G + ARRVFD M +D VSW A+ T++G EA++
Sbjct: 75 LDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQ-EALVL 133
Query: 147 LIEMMRKGLRLDHVSFTSAASAC-GHEKNLELGKQIHGVSIKMGY-GTHVSVGNVLMSTY 204
L EM+ GLR + + +AA AC E G + G +IK G+ GT VSVG L+ +
Sbjct: 134 LGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMF 193
Query: 205 SKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFI 259
++ A KVF + +R V+ WT MI+ + AV LF M DG P+ T
Sbjct: 194 ARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMS 253
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF---ESMQDSEKVFDEL 316
++ A + G+ +H L ++ +S+ V L+ MY + +SM+ + KVF +
Sbjct: 254 SMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRM 313
Query: 317 SCREIISWNALISGYAQ-NGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLK 374
++SW ALISGY Q G AV+ ++ ES +PN T+ S+L A D
Sbjct: 314 PTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSD--QD 371
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G++ H+ ++K + + +VG+AL+ MY + G + E+++ F++ E++ + ++ I
Sbjct: 372 SGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETG 431
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
R S + ++E+ V + TF S+L+ G+ KG+ L +K E
Sbjct: 432 R-----SNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKT-GFESDK 485
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
+ +V M R G L++A ++ + S++ A HG+ E
Sbjct: 486 GISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAE 534
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 213/632 (33%), Positives = 338/632 (53%), Gaps = 23/632 (3%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYST 62
KSG+ AL +F+ + ++V+W T +SG ++ + A + M GV + +
Sbjct: 82 KSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNA 141
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
AL+ C G Q+HSL V+ G ++ ++G+ LI +YSR G L A VF M D
Sbjct: 142 ALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPD 201
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
V + +++S ++G+ A+ L +M R+GL+ + + TS + C +G+QIH
Sbjct: 202 VVGYTSLVSALCRNGELA-RAVDVLCQMTRQGLQPNEHTMTSMLAECPRG----IGEQIH 256
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NRE 237
G +K+ V L+ YS+ G A VF + +NV+SW +M+ + +
Sbjct: 257 GYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLD 316
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
DA+ +F EM +GV PN+ F A+S V GR IH IK + +++ V N L+
Sbjct: 317 DALRVFSEMISEGVQPNEFAFS---IALSACGSVCLGRQIHCSAIKRDLMTDIRVSNALL 373
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
+MY R + + E V ++ +++SW A IS QNG S AV + E PN Y
Sbjct: 374 SMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDY 433
Query: 357 TFGSVLNAVGAAEDISLKH-GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
F S L++ D++L H G++ H +K+G D G+AL++MY K G I ++ F
Sbjct: 434 AFSSGLSSCA---DLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAF 490
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ +W ++I LA+HGD + F EM + RPD TFLSVL C G++
Sbjct: 491 DVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVK 550
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
+G F M Y + P+P HY+CM+DMLGR GR EA ++ +P P + + ++LL +
Sbjct: 551 EGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLAS 610
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
C++H N+++G+ AD LM++ S SYVLMSNLYA +W +R+ M GV+K+
Sbjct: 611 CKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDA 670
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
G+SW +V + ++ F +GD +HP S IY+M
Sbjct: 671 GWSWIEVK--NEVNTFVAGDMSHPDSTSIYQM 700
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 165/339 (48%), Gaps = 14/339 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y + G F A +F NL + ++VSW +++ + DDAL M GV +
Sbjct: 275 IDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNE 334
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+S ALS C G Q+H +K L +++ V NAL++MY R G + E V +
Sbjct: 335 FAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGK 391
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ N D VSW A +S Q+G + +A+ L++M +G + +F+S S+C L
Sbjct: 392 IENPDLVSWTAAISANFQNG-FSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQ 450
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+Q+H +++K+G V GN L++ YSKC G A F M +V+SW ++I +
Sbjct: 451 GRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQ 510
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR-MIHGLCIKTNFLSEPS 291
A+ F EM P+D TF+ ++ + LVKEG + + PS
Sbjct: 511 HGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPS 570
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALIS 329
C+I M R ++ ++ + + +++ W L++
Sbjct: 571 HYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLA 609
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D ++ LD K G + ++ +F+ K+ AWT IS R+G E+ F +M
Sbjct: 69 DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVG 508
GV P+ + L C G + G + ++ + D + SC++++ R G
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGF---AADAWIGSCLIELYSRCG 185
Query: 509 RLEEAEELVGQIPGGPGLSVLQSLLGA-CRIHGNVEMGERIADALMKMEPAG 559
L AEE+ ++ P + SL+ A CR N E+ R D L +M G
Sbjct: 186 SLRAAEEVFRRME-APDVVGYTSLVSALCR---NGELA-RAVDVLCQMTRQG 232
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 213/651 (32%), Positives = 358/651 (54%), Gaps = 25/651 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN-PDIVSWNTVLSGF------EKSDDALSFALRMNLIGV 53
+ MY + +A +F L N +IV+WN ++ GF EKS + S A N V
Sbjct: 184 IGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLV 243
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
+ +++ A + C E FG Q+H ++K + YV +L+TMY++ G + +A++
Sbjct: 244 ---SASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKK 300
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHE 172
VFD++ +K+ NA++S + +G L L M+ G +D + +S S C
Sbjct: 301 VFDQVLDKEVELRNAMISAFIGNGR--AYDALGLYNKMKAGETPVDSFTISSLLSGCSVV 358
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ + G+ +H IK ++V++ + L++ Y KC T DA+ VF M +R+V++W +MI
Sbjct: 359 GSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMI 418
Query: 233 S---MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNF 286
+ NR +DA+ LF+ M +GV + +I A + + N V+ G +IHG IK
Sbjct: 419 AGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLEN-VELGHLIHGFAIKRGL 477
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S+ V L+ MY++F + +E VF + + +++WN++IS Y+ NGL ++
Sbjct: 478 ESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQ 537
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++ ++ + +VL AV + +L G+ H++ I++ + SD V +AL+DMY K
Sbjct: 538 ILQHGFYLDSVSITTVLVAVSSVA--ALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKC 595
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + +Q +F ++ W ++I+ HG+ E + FKEM+ PD +TFL+++
Sbjct: 596 GCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALI 655
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
T C +GM+ +G +LF M +Y +EP +HY+ +VD+LGR GRL++A + +P
Sbjct: 656 TSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDAD 715
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
SV LL ACR H N+E+GE +AD L+KMEPA +YV + NLY E W+ A LR
Sbjct: 716 RSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRAS 775
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
MK +G++K G SW +V + + F SGD++ R EIY+ L S M+
Sbjct: 776 MKGRGLKKSPGCSWIEVK--NRVDVFFSGDSSSTRRIEIYKTLSSLKSNME 824
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 160/574 (27%), Positives = 276/574 (48%), Gaps = 41/574 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN-----PDIVSWNTVLSGFEKS---DDALSFALRMNLIG 52
+NMY K G AL +F+ ++ PDI WN V+ G+ K ++ L+ RM
Sbjct: 97 INMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQ--- 153
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
LS+ ++ G Q+H I++ + + Y+ ALI MYS R +EA
Sbjct: 154 ----------ELSW------YMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAW 197
Query: 113 RVFDEMPNKDS-VSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACG 170
+F ++ N+ + V+WN ++ G+ ++G + E L L + + + +L SFT A +AC
Sbjct: 198 SLFGKLENRSNIVAWNVMIGGFVENGMW--EKSLELYSLAKNENCKLVSASFTGAFTACS 255
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
H + L+ G+Q+H IKM + V L++ Y+K DA KVF ++ D+ V
Sbjct: 256 HGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNA 315
Query: 231 MISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MIS DA+ L+ +M+ + T L+ S+ GR +H IK +
Sbjct: 316 MISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRS 375
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
S ++ + L+TMY + S +D++ VF + R++++W ++I+G+ QN A+ F
Sbjct: 376 MQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFR 435
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ KE K ++ SV++A E++ L G H IK GL+SD V +L+DMY K
Sbjct: 436 AMEKEGVKADSDVMTSVISAGLGLENVEL--GHLIHGFAIKRGLESDVFVACSLVDMYSK 493
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G ++ VF+ K+ AW ++IS + +G E +N ++ G DS++ +V
Sbjct: 494 FGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTV 553
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L + KG+ L ++ I + ++DM + G L+ A+ + +P
Sbjct: 554 LVAVSSVAALLKGKTLHAYQIR-LQIPSDLQVENALIDMYVKCGCLKYAQLIFENMP-RR 611
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPA 558
L S++ HGN E R+ + + E A
Sbjct: 612 NLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETA 645
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 233/477 (48%), Gaps = 39/477 (8%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ + L C G +H+ IV GL S+ Y+ +LI MY + G L A +VFD+M
Sbjct: 57 TFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKM 116
Query: 119 P-NKDSVS----WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
++DS WN ++ GY + G + E + + R+ +S+ A
Sbjct: 117 SESRDSAPDITVWNPVIDGYFKYGHFE--------EGLAQFCRMQELSWYMA-------- 160
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMI 232
G+QIHG I+ + + L+ YS C +A +F ++ +R N+++W MI
Sbjct: 161 ----GRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMI 216
Query: 233 SMNREDAVSLFKEMRLDGVCPND------VTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
E+ + K + L + N+ +F G A S G ++ GR +H IK NF
Sbjct: 217 GGFVENGM-WEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNF 275
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+P VC L+TMYA+ S++D++KVFD++ +E+ NA+IS + NG + A+ +
Sbjct: 276 QDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDAL-GLYN 334
Query: 347 VIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+K E+ +++T S+L+ G + S G+ H+ +IK + S+ + SALL MY K
Sbjct: 335 KMKAGETPVDSFTISSLLS--GCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYK 392
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GS ++ VF +E+ AW ++I+ ++ ++ ++ F+ ME +GV+ DS SV
Sbjct: 393 CGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSV 452
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
++ + G HL +E +VDM + G E AE + +P
Sbjct: 453 ISAGLGLENVELG-HLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP 508
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 209/639 (32%), Positives = 355/639 (55%), Gaps = 23/639 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + +V+WNT+++ + E+ +A+ M IG+ V++
Sbjct: 166 VFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGD 225
Query: 73 FLFGLQLHSLIVKFGLD--SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL 130
F +H ++VK G + +++YV ++ I MY+ G L A++VFD +++ WN ++
Sbjct: 226 FKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMI 285
Query: 131 SGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
S + Q+ ++ +E I + + + +D V+ SA SA H + EL +Q+H IK
Sbjct: 286 SAFVQN-NFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNV 344
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFK 244
T V V N L++ YS+C + K+F M +++V+SW TMIS ++A+ LF
Sbjct: 345 AVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFY 404
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
EM+ + + VT L+ A S G+ HG ++ E + + LI MYA+
Sbjct: 405 EMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSG 463
Query: 305 SMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSV 361
++ ++ VF++ R+ +WN+++SGY QNGL A ++ + PN T S+
Sbjct: 464 LIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASI 523
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L A + I G++ H I+ LD + V +AL+DMY K GSI ++ VF++ EK
Sbjct: 524 LPACNPSGYIDW--GKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEK 581
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
S ++ +I +HG ES + F M+ G++PD++T ++VL+ C G++ +G +F
Sbjct: 582 SIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIF 641
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV-GQIPGGPGLSVLQSLLGACRIHG 540
+SM Y+I+PS +H+ C+ DMLGR GR+++A E V G G + + SLL ACRIH
Sbjct: 642 ESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHK 701
Query: 541 NVEMGERIADALMKMEPAG--SGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
E+G+ +A L++ME +G +VL+SN+YAE+ +WE V I+RK M+ +G++KE G S
Sbjct: 702 QFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSS 761
Query: 599 WADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKY 637
W ++ ++ F+S D HP+S++IY M E L EMK+
Sbjct: 762 WIEIAGY--MNHFASKDRKHPQSDQIYSMLEELLMEMKH 798
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 150/584 (25%), Positives = 280/584 (47%), Gaps = 38/584 (6%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFA--LRMNLIGVVFDAVT 59
C+ GQ A +F+ L P V WNT++ G D+AL F ++ + V D+ T
Sbjct: 39 CQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYT 98
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR-------------WG 106
YS+ L C D + G +H+ ++ ++ V N+L+ MYS +
Sbjct: 99 YSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYS 158
Query: 107 RLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA 166
R R+VFD M + V+WN +++ Y + Y EA+ MM+ G++ VSF +
Sbjct: 159 RCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYA-EAVKQFSMMMKIGIKPSPVSFVNVF 217
Query: 167 SACGHEKNLELGKQIHGVSIKMG--YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
A + + +HG+ +K+G Y + V + + Y++ A KVF +RN
Sbjct: 218 PAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERN 277
Query: 225 VISWTTMISMNREDAVSL------FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
W TMIS ++ SL F+ + + ++VT + I A S + +H
Sbjct: 278 TEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLH 337
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
IK +++ V N LI MY+R S+ S K+FD + ++++SWN +IS + QNGL+
Sbjct: 338 AFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLND 397
Query: 339 AAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A+ F+ + K+ ++ T ++L+A + + G++ H ++++ G+ + + S
Sbjct: 398 EALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDI--GKQTHGYLLRNGIQFEGM-DSY 454
Query: 398 LLDMYGKRGSIFESQRVFNE--TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
L+DMY K G I +Q VF + + E+ + W +++S ++G + ++M ++ V
Sbjct: 455 LIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVM 514
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P+ +T S+L C +G I G+ L +++ ++ + + ++DM + G + AE
Sbjct: 515 PNVVTLASILPACNPSGYIDWGKQLHGFSIRN-DLDQNVFVATALIDMYSKSGSIAHAEN 573
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+ + ++ +LG +G MGE +M+ +G
Sbjct: 574 VFSKANEKSIVTYSTMILG----YGQHGMGESALFMFHRMQKSG 613
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 164/313 (52%), Gaps = 17/313 (5%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MY + D + IF+N+ D+VSWNT++S F + +D+AL M ++ D+VT
Sbjct: 358 MYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVT 417
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE-- 117
+ LS D G Q H +++ G+ E + + LI MY++ G + A+ VF++
Sbjct: 418 VTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSF 476
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+D +WN+++SGYTQ+G +A L L +M+ + + + V+ S AC ++
Sbjct: 477 SHERDQATWNSMMSGYTQNGLVD-QAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDW 535
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GKQ+HG SI+ +V V L+ YSK A VF + +++++++++TMI
Sbjct: 536 GKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQ 595
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
M E A+ +F M+ G+ P+ VT + ++ A S LV EG I ++T + +PS
Sbjct: 596 HGMG-ESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFE-SMRTVYNIQPS 653
Query: 292 VCN--CLITMYAR 302
+ C+ M R
Sbjct: 654 TEHFCCVADMLGR 666
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/613 (32%), Positives = 341/613 (55%), Gaps = 28/613 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF------EKSDDALSFALRMNLIGVV 54
++MY K G + A IF + +++SWN+++SG+ E S DA M G
Sbjct: 399 LSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFC---DMQFEGFD 455
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
DA++ LS C E L G H+ + DS + + NAL+ YS G+L + ++
Sbjct: 456 PDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKL 515
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F +MP ++++SWN ++SG +GD +A+ L +M ++ + LD V+ S C +N
Sbjct: 516 FQKMPLRNAISWNTLISGCVHNGDTK-KAVALLHKMQQEKMELDLVTLISIIPICRVAEN 574
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK---VFRRMHDRNVISWTTM 231
L G +HG +IK G+ VS+ N L+S Y C GD N +F M R+++SW +
Sbjct: 575 LIQGMTLHGYAIKTGFACDVSLVNALISMYFNC---GDINAGKFLFEVMPWRSIVSWNAL 631
Query: 232 ISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I+ R + ++ F +M +G PN VT + L+ + + +G+ IH ++T
Sbjct: 632 ITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRT---LLQGKSIHAFAVRTGV 688
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ E + LI+MYARFE++ +F+ +I WNA++S Y Q + +V F
Sbjct: 689 IVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCE 748
Query: 347 VI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ +P+ TF S+++A ++L + +++I+ G D ++ +AL+D++ +
Sbjct: 749 LLHARVEPDYITFLSLISACVQLSSLNLSNS--VMAYVIQKGFDKHIVISNALIDLFARC 806
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G+I ++++F K +W+ +I+ HGD E+ + +M G++PD IT+ SVL
Sbjct: 807 GNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVL 866
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G I +G +F+SM+++ + +HY+CMVD+LGR G+L EA + V ++P P
Sbjct: 867 SACSHGGFIDQGWMIFNSMVEE-GVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPS 925
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+S+L+SLLGAC IHGNV++GE+I+ L +++P SGSYV++ N+YA G W +R
Sbjct: 926 VSLLESLLGACIIHGNVKLGEKISSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSD 985
Query: 586 MKSKGVRKEVGFS 598
M+ + +RK GFS
Sbjct: 986 MEERQLRKIPGFS 998
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 298/574 (51%), Gaps = 27/574 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY G A +F++ ++V WN+++S + +KS +A +M + +
Sbjct: 298 ISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNV 357
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ + + C + F +G LH+ ++K+ LDS++ V AL++MY++ G L A +F +
Sbjct: 358 VTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQ 417
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAIL-ALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP ++ +SWN+++SGY +G + EA + A +M +G D +S + SAC + +
Sbjct: 418 MPRRNLLSWNSMISGYGHNGLW--EASMDAFCDMQFEGFDPDAISIVNILSACSKLEAIL 475
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
LGK H S + + +++++ N L++ YS C + K+F++M RN ISW T+IS
Sbjct: 476 LGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCV 535
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + AV+L +M+ + + + VT I +I + + +G +HG IKT F + S
Sbjct: 536 HNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVS 595
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE- 350
+ N LI+MY + + +F+ + R I+SWNALI+GY + L + +F +I+E
Sbjct: 596 LVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREG 655
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN T +LN + + +L G+ H+ ++ G+ + + ++L+ MY + +I
Sbjct: 656 QKPNYVT---LLNLLPSCR--TLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINS 710
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+F ++ W AI+S + + + + F E+ + V PD ITFLS+++ C +
Sbjct: 711 FIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQ 770
Query: 471 NGMIHKGRHLFDSMLK---DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
++ + +++ D HI S + ++D+ R G + A+++ + +S
Sbjct: 771 LSSLNLSNSVMAYVIQKGFDKHIVIS----NALIDLFARCGNISIAKKIFEGLSSKDAVS 826
Query: 528 VLQSLLGACRIHGNVEMGERIADA--LMKMEPAG 559
+++ +HG+ E + L M+P G
Sbjct: 827 -WSTMINGYGLHGDSEAALALLSQMRLSGMKPDG 859
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 244/490 (49%), Gaps = 13/490 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS--DDALSFALR-MNLIGVVFDA 57
++ Y K+G+ KA + + ++ PD+V+WN ++SG+ + D + LR +N +G+ +
Sbjct: 197 VDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNV 256
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ + C + G +H +VK G S+ ++ ALI+MY+ G L AR +FD
Sbjct: 257 STFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDS 316
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
K+ V WN+++S Y Q+ EA +M++ ++ + V+F S C + N
Sbjct: 317 AAEKNVVIWNSMISAYAQNQK-SSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWY 375
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
GK +H +K + +SV L+S Y+K A+ +F +M RN++SW +MIS
Sbjct: 376 GKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGH 435
Query: 236 ---REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E ++ F +M+ +G P+ ++ + ++ A S + G+ H + F S ++
Sbjct: 436 NGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNI 495
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ Y+ + S K+F ++ R ISWN LISG NG + AV + +E
Sbjct: 496 SNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKM 555
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ + T S++ AE+ L G H + IK G D + +AL+ MY G I
Sbjct: 556 ELDLVTLISIIPICRVAEN--LIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAG 613
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ +F +S +W A+I+ H VM F +M +G +P+ +T L++L C R
Sbjct: 614 KFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSC-RT 672
Query: 472 GMIHKGRHLF 481
+ K H F
Sbjct: 673 LLQGKSIHAF 682
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 231/470 (49%), Gaps = 12/470 (2%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTAL 64
G + AL F + P + N ++ +D L L+ ++G D T+ +
Sbjct: 103 GAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVI 162
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
C +H ++++ + + + AL+ Y++ GR+V+AR V D++ D V
Sbjct: 163 KACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLV 222
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
+WNA++SGY+ +G + E L ++ GL+ + +F S C K L++GK IHG
Sbjct: 223 TWNALISGYSLNG-FDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGF 281
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDA 239
+K G+ + + L+S Y+ A +F ++NV+ W +MIS +A
Sbjct: 282 VVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEA 341
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+F++M + PN VTF+ +I G+ +H +K S+ SV L++M
Sbjct: 342 FKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSM 401
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
YA+ + ++ +F ++ R ++SWN++ISGY NGL A++ AF + E P+A +
Sbjct: 402 YAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISI 461
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
++L+A E I L G+ H+ + DS+ + +ALL Y G + S ++F +
Sbjct: 462 VNILSACSKLEAILL--GKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKM 519
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ +W +IS +GD + + +M+ + + D +T +S++ +C
Sbjct: 520 PLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPIC 569
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 153/313 (48%), Gaps = 22/313 (7%)
Query: 214 NKVFRRMHDRNVISWTTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE 273
N + RR+ D + ED + ++ + R+ G +D TF +I A + V
Sbjct: 124 NLMIRRLCDHGLF----------EDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWI 173
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
+H + ++T+F + L+ YA+ M + V D++S ++++WNALISGY+
Sbjct: 174 AEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSL 233
Query: 334 NGLSLAAVQAFFGVIKES-----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
NG + F V+++ KPN TF S++ + L G+ H ++K G
Sbjct: 234 NGFD----KEVFEVLRQINEMGLKPNVSTFASIIPLCTRMK--CLDIGKSIHGFVVKSGF 287
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
SD + AL+ MY G++F ++ +F+ EK+ W ++ISA A++ F++
Sbjct: 288 SSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQ 347
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG 508
M ++P+ +TF+S++ C + G+ L ++K Y ++ + ++ M ++G
Sbjct: 348 MLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMK-YRLDSQLSVATALLSMYAKLG 406
Query: 509 RLEEAEELVGQIP 521
L A+ + Q+P
Sbjct: 407 DLNSADFIFYQMP 419
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 209/639 (32%), Positives = 356/639 (55%), Gaps = 23/639 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + +V+WNT+++ + E+ +A+ M IG+ V++
Sbjct: 142 VFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGD 201
Query: 73 FLFGLQLHSLIVKFGLD--SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL 130
F +H ++VK G + +++YV ++ I MY+ G L A++VFD +++ WN ++
Sbjct: 202 FKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMI 261
Query: 131 SGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
S + Q+ ++ +E I + + + +D V+ SA SA H + EL +Q+H IK
Sbjct: 262 SAFVQN-NFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNV 320
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFK 244
T V V N L++ YS+C + K+F M +++V+SW TMIS ++A+ LF
Sbjct: 321 AVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFY 380
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
EM+ + + VT L+ A S G+ HG ++ N + + + LI MYA+
Sbjct: 381 EMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLR-NGIQFEGMDSYLIDMYAKSG 439
Query: 305 SMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSV 361
++ ++ VF++ R+ +WN+++SGY QNGL A ++ + PN T S+
Sbjct: 440 LIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASI 499
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L A + I G++ H I+ LD + V +AL+DMY K GSI ++ VF++ EK
Sbjct: 500 LPACNPSGYIDW--GKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEK 557
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
S ++ +I +HG ES + F M+ G++PD++T ++VL+ C G++ +G +F
Sbjct: 558 SIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIF 617
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV-GQIPGGPGLSVLQSLLGACRIHG 540
+SM Y+I+PS +H+ C+ DMLGR GR+++A E V G G + + SLL ACRIH
Sbjct: 618 ESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHK 677
Query: 541 NVEMGERIADALMKMEPAG--SGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
E+G+ +A L++ME +G +VL+SN+YAE+ +WE V I+RK M+ +G++KE G S
Sbjct: 678 QFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSS 737
Query: 599 WADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKY 637
W ++ ++ F+S D HP+S++IY M E L EMK+
Sbjct: 738 WIEIAGY--MNHFASKDRKHPQSDQIYSMLEELLMEMKH 774
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 150/584 (25%), Positives = 280/584 (47%), Gaps = 38/584 (6%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFA--LRMNLIGVVFDAVT 59
C+ GQ A +F+ L P V WNT++ G D+AL F ++ + V D+ T
Sbjct: 15 CQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYT 74
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR-------------WG 106
YS+ L C D + G +H+ ++ ++ V N+L+ MYS +
Sbjct: 75 YSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYS 134
Query: 107 RLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA 166
R R+VFD M + V+WN +++ Y + Y EA+ MM+ G++ VSF +
Sbjct: 135 RCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYA-EAVKQFSMMMKIGIKPSPVSFVNVF 193
Query: 167 SACGHEKNLELGKQIHGVSIKMG--YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
A + + +HG+ +K+G Y + V + + Y++ A KVF +RN
Sbjct: 194 PAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERN 253
Query: 225 VISWTTMISMNREDAVSL------FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
W TMIS ++ SL F+ + + ++VT + I A S + +H
Sbjct: 254 TEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLH 313
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
IK +++ V N LI MY+R S+ S K+FD + ++++SWN +IS + QNGL+
Sbjct: 314 AFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLND 373
Query: 339 AAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A+ F+ + K+ ++ T ++L+A + + G++ H ++++ G+ + + S
Sbjct: 374 EALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDI--GKQTHGYLLRNGIQFEGM-DSY 430
Query: 398 LLDMYGKRGSIFESQRVFNE--TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
L+DMY K G I +Q VF + + E+ + W +++S ++G + ++M ++ V
Sbjct: 431 LIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVM 490
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P+ +T S+L C +G I G+ L +++ ++ + + ++DM + G + AE
Sbjct: 491 PNVVTLASILPACNPSGYIDWGKQLHGFSIRN-DLDQNVFVATALIDMYSKSGSIAHAEN 549
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+ + ++ +LG +G MGE +M+ +G
Sbjct: 550 VFSKANEKSIVTYSTMILG----YGQHGMGESALFMFHRMQKSG 589
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 196/378 (51%), Gaps = 14/378 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS----FALRMNLIGVVFDAV 58
MY + G + A +F+N + WNT++S F +++ +L F + D V
Sbjct: 232 MYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEV 291
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T +A+S + F QLH+ ++K ++V V NALI MYSR + + ++FD M
Sbjct: 292 TLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNM 351
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P KD VSWN ++S + Q+G EA++ EM ++ L +D V+ T+ SA +N ++G
Sbjct: 352 PEKDVVSWNTMISAFVQNG-LNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIG 410
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR--MHDRNVISWTTMISMNR 236
KQ HG ++ G + + L+ Y+K + A VF + H+R+ +W +M+S
Sbjct: 411 KQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYT 469
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ A + ++M V PN VT ++ A + + G+ +HG I+ +
Sbjct: 470 QNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVF 529
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V LI MY++ S+ +E VF + + + I++++ +I GY Q+G+ +A+ F + K
Sbjct: 530 VATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSG 589
Query: 352 -KPNAYTFGSVLNAVGAA 368
+P+A T +VL+A A
Sbjct: 590 IQPDAVTLVAVLSACSYA 607
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 164/313 (52%), Gaps = 17/313 (5%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MY + D + IF+N+ D+VSWNT++S F + +D+AL M ++ D+VT
Sbjct: 334 MYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVT 393
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE-- 117
+ LS D G Q H +++ G+ E + + LI MY++ G + A+ VF++
Sbjct: 394 VTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSF 452
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+D +WN+++SGYTQ+G +A L L +M+ + + + V+ S AC ++
Sbjct: 453 SHERDQATWNSMMSGYTQNGLVD-QAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDW 511
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GKQ+HG SI+ +V V L+ YSK A VF + +++++++++TMI
Sbjct: 512 GKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQ 571
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
M E A+ +F M+ G+ P+ VT + ++ A S LV EG I ++T + +PS
Sbjct: 572 HGMG-ESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFE-SMRTVYNIQPS 629
Query: 292 VCN--CLITMYAR 302
+ C+ M R
Sbjct: 630 TEHFCCVADMLGR 642
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 208/665 (31%), Positives = 356/665 (53%), Gaps = 30/665 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDAVTY 60
YC+ G A + + + + VS+N ++ + + A L R GV D +Y
Sbjct: 53 YCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSY 112
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ AL+ C G +H+L + GL S V+V N+L++MYS+ G + EARRVFD
Sbjct: 113 AAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEE 172
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGH--EKNLEL 177
+D VSWN+++SGY + G E ++ + MMR+G + L+ + S C + +++
Sbjct: 173 RDDVSWNSLVSGYVRAG--AREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDI 230
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
+ +HG IK G + V + + ++ Y+K +A +FR + + NV+ + TMI+
Sbjct: 231 AEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCR 290
Query: 234 ----MNRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+ +E +A++L+ E++ G+ P + TF ++ A ++ ++ G+ IHG IK F
Sbjct: 291 TETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTF 350
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ + + LI +Y M+D + F +I++W A++SG QN L A+ F
Sbjct: 351 QEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHE 410
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ KP+ +T SV+NA A + G++ K G D ++G++ + MY +
Sbjct: 411 SLGAGLKPDLFTISSVMNA--CASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARS 468
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + + R F E + +W+A+IS A+HG ++ F EM + V P+ ITFL VL
Sbjct: 469 GDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVL 528
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
T C G++ +G +++M KDY + P+ H +C+VD+LGR GRL +AE +
Sbjct: 529 TACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHAD 588
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ +SLL +CRIH ++E G+ +A+ +M++EP S SYV++ N+Y + G+ + + R
Sbjct: 589 PVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDL 648
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLN------ 639
MK +GV+KE G SW ++ G+H F +GD +HP S IY E + S ++ L
Sbjct: 649 MKQRGVKKEPGLSWIELK--CGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLATTDTEI 706
Query: 640 SKRER 644
SKRE+
Sbjct: 707 SKREQ 711
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 202/405 (49%), Gaps = 17/405 (4%)
Query: 90 SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
+ +++ N L+ Y R G + ARR+ DEMP +++VS+N ++ Y+++G ++ L
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREG-LAPLSLETLAR 99
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
R G+ +D S+ +A +AC +L G+ +H ++I G + V V N L+S YSKC
Sbjct: 100 ARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGE 159
Query: 210 TGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
G+A +VF +R+ +SW +++S RE+ V +F MR G+ N +I
Sbjct: 160 MGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKC 219
Query: 265 IS--IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
S + +HG IK S+ + + +I MYA+ ++ ++ +F + ++
Sbjct: 220 CSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVV 279
Query: 323 SWNALISGYAQN----GLSLAA-VQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKH 375
+N +I+G+ + G +A+ + ++ +P +TF SVL A A L+
Sbjct: 280 MFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAG--YLEF 337
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G++ H +IK D +GSAL+D+Y G + + R F + + WTA++S +
Sbjct: 338 GKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQ 397
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+ +E ++ F E G++PD T SV+ C + G +
Sbjct: 398 NELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI 442
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 230/472 (48%), Gaps = 25/472 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G+ +A +F+ D VSWN+++SG+ ++ ++ + M G+ ++
Sbjct: 151 VSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNS 210
Query: 58 VTYSTALSFCLDH-EGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ + C +G + +H ++K GLDS+V++ +A+I MY++ G LVEA +F
Sbjct: 211 FALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALF 270
Query: 116 DEMPNKDSVSWNAILSGYTQD-----GDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
+ + V +N +++G+ + + EA+ E+ +G++ +F+S AC
Sbjct: 271 RSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACN 330
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
LE GKQIHG IK + +G+ L+ Y D + FR ++++WT
Sbjct: 331 LAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTA 390
Query: 231 MIS---MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
M+S N E A+SLF E G+ P+ T +++A + + + G I K+
Sbjct: 391 MVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSG 450
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F + N + MYAR + + + F E+ +++SW+A+IS +AQ+G + A+ FF
Sbjct: 451 FDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALH-FF 509
Query: 346 GVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMY 402
+ ++K PN TF VL A + G R + + K GL + ++D+
Sbjct: 510 DEMVDAKVVPNEITFLGVLTACSHGGLVD--EGLRYYETMTKDYGLSPTIKHCTCVVDLL 567
Query: 403 GKRGSIFESQR-VFNETQEKSEFAWTAIISALARHGDYES---VMNQFKEME 450
G+ G + +++ + N W +++++ H D E V N+ E+E
Sbjct: 568 GRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELE 619
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 6/247 (2%)
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N L+ Y R + ++ DE+ R +S+N LI Y++ GL+ +++ + +
Sbjct: 47 NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLET-LARARRAGV 105
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ F + L+ G+ H+ I GL S V ++L+ MY K G + E++R
Sbjct: 106 DVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARR 165
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC-GR-N 471
VF+ +E+ + +W +++S R G E ++ F M G+ +S SV+ C GR +
Sbjct: 166 VFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGD 225
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + + ++K ++ S M+DM + G L EA L + P + + +
Sbjct: 226 GTMDIAEAVHGCVIK-AGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPNVVMFNT 283
Query: 532 LL-GACR 537
++ G CR
Sbjct: 284 MIAGFCR 290
>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
Length = 732
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 324/580 (55%), Gaps = 15/580 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDA 57
++MYCK+G D+A + + D++SWN ++SG+ +S D L RM G+
Sbjct: 158 VDMYCKTGDVDEADLVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTK 217
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY+T L+ C E G +H +V GLD + V + L+ MY + G L + +R E
Sbjct: 218 VTYATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCE 277
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +++++WN I+ Y + D+ +A+ + +M +G++ D V+F C +L
Sbjct: 278 VHERNTIAWNTIIGAYARYSDH-FQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQ 336
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G +H ++G+ + + V N L + Y+KC A K+F M RN +SW ++IS +
Sbjct: 337 GILLHDWISQLGFES-IIVHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQ 395
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
DA F+ M+L+G P++VT I ++ A + KEG IH + +++ F V
Sbjct: 396 HGCYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGV 455
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N LI MYA+ + + VFD ++ R +SWN +++ Y + GL+ AV+ F+ + +
Sbjct: 456 ANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM--DVA 513
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS--DPIVGSALLDMYGKRGSIFE 410
+ T+ + L+A L HG+ H +++ G + D + +AL++MYGK GS+ E
Sbjct: 514 RDKVTYVAALDACSGLAG-GLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQE 572
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++++F+E + WT++I A A+H + E + K ME GV+ D + FLS+L+ C
Sbjct: 573 ARKIFDEMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQDGVKVDDVVFLSILSGCDH 632
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G++ +G F SM+ DY I P +HY+C++D+LGR G L+ AE+LV ++P V
Sbjct: 633 SGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWM 692
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLY 570
+LL ACR+HGN E G+R A + ++P+ +YV++SN+Y
Sbjct: 693 TLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIY 732
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 155/534 (29%), Positives = 266/534 (49%), Gaps = 27/534 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----SDDALSFALRMNLIGVVFD 56
+NMY K + A +F+ + +P++VSW +V+ F + +++ +M L G+ +
Sbjct: 60 INMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPN 119
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T L C G Q+H +++ G+ + +GNAL+ MY + G + EA V
Sbjct: 120 LITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLR 175
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
EMP +D +SWN ++SGY Q GD E + L M + GL V++ + +AC ++L
Sbjct: 176 EMPKRDVISWNIMISGYAQSGDCK-EGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLG 234
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
GK IH + MG V + L+ Y KC D + +H+RN I+W T+I
Sbjct: 235 EGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYA 294
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ A+ F++M+L GV + VTF+ ++ S + +G ++H + F S
Sbjct: 295 RYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFES-II 353
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-- 349
V N L MYA+ S+ + K+F+ + R +SWN+LIS Q+G A FF +K
Sbjct: 354 VHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHG-CYADAHKFFQRMKLE 412
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
S+P+ T S+L+A + + K G H +++ G D V +AL+ MY K G
Sbjct: 413 GSRPDEVTCISMLDA--CTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHE 470
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC- 468
++ VF+ E++ +W I++A G + F +M+ V D +T+++ L C
Sbjct: 471 AARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMD---VARDKVTYVAALDACS 527
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
G G + G+ + ML D+ D + +V+M G+ G L+EA ++ ++
Sbjct: 528 GLAGGLAHGKLIHGYML-DHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEM 580
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 229/443 (51%), Gaps = 13/443 (2%)
Query: 41 ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALIT 100
AL RM L GV D+VT+ T L C G ++H+ I + GL++++Y NALI
Sbjct: 2 ALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALIN 61
Query: 101 MYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
MY + +A ++F M + + VSW +++ + Q G G E++L +M +G+R + +
Sbjct: 62 MYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLI 121
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+ + AC NL G+Q+HG ++ G S+GN L+ Y K +A+ V R M
Sbjct: 122 TMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREM 177
Query: 221 HDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
R+VISW MI S + ++ + M+ DG+ P VT+ L++A S G + EG+
Sbjct: 178 PKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGK 237
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
IH + + V + L+ MY + S++D ++ E+ R I+WN +I YA+
Sbjct: 238 SIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYS 297
Query: 336 LSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
A+++F + ++ K +A TF VL + L G H I ++G +S IV
Sbjct: 298 DHFQALRSFQQMQLQGVKADAVTF--VLMLGTCSSPAHLAQGILLHDWISQLGFES-IIV 354
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
++L MY K GS+ ++++F ++ +W ++ISA +HG Y F+ M+ +G
Sbjct: 355 HNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGS 414
Query: 455 RPDSITFLSVLTVCGRNGMIHKG 477
RPD +T +S+L C + +G
Sbjct: 415 RPDEVTCISMLDACTKQANAKEG 437
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 100/172 (58%), Gaps = 10/172 (5%)
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P++ TF + L A + +L G++ H++I + GL++D +AL++MYGK S ++
Sbjct: 15 RPDSVTFVTCLRACTV--EGALDDGRKVHAYIRESGLETDIYAANALINMYGKCRSPEDA 72
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDY--ESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++F+ + + +WT++I A++G ESV+ F++ME +G+RP+ IT ++VL C
Sbjct: 73 FQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVL-LFRKMELEGIRPNLITMVAVLRACN 131
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ GR + +L + + + +VDM + G ++EA+ ++ ++P
Sbjct: 132 ----LTDGRQVHGYVL-EAGMSLDTSLGNALVDMYCKTGDVDEADLVLREMP 178
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 213/651 (32%), Positives = 358/651 (54%), Gaps = 25/651 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN-PDIVSWNTVLSGF------EKSDDALSFALRMNLIGV 53
+ MY + +A +F L N +IV+WN ++ GF EKS + S A N V
Sbjct: 589 IGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLV 648
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
+ +++ A + C E FG Q+H ++K + YV +L+TMY++ G + +A++
Sbjct: 649 ---SASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKK 705
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHE 172
VFD++ +K+ NA++S + +G L L M+ G +D + +S S C
Sbjct: 706 VFDQVLDKEVELRNAMISAFIGNGR--AYDALGLYNKMKAGETPVDSFTISSLLSGCSVV 763
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ + G+ +H IK ++V++ + L++ Y KC T DA+ VF M +R+V++W +MI
Sbjct: 764 GSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMI 823
Query: 233 S---MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNF 286
+ NR +DA+ LF+ M +GV + +I A + + N V+ G +IHG IK
Sbjct: 824 AGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLEN-VELGHLIHGFAIKRGL 882
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S+ V L+ MY++F + +E VF + + +++WN++IS Y+ NGL ++
Sbjct: 883 ESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQ 942
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++ ++ + +VL AV + +L G+ H++ I++ + SD V +AL+DMY K
Sbjct: 943 ILQHGFYLDSVSITTVLVAVSSVA--ALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKC 1000
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + +Q +F ++ W ++I+ HG+ E + FKEM+ PD +TFL+++
Sbjct: 1001 GCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALI 1060
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
T C +GM+ +G +LF M +Y +EP +HY+ +VD+LGR GRL++A + +P
Sbjct: 1061 TSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDAD 1120
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
SV LL ACR H N+E+GE +AD L+KMEPA +YV + NLY E W+ A LR
Sbjct: 1121 RSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRAS 1180
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
MK +G++K G SW +V + + F SGD++ R EIY+ L S M+
Sbjct: 1181 MKGRGLKKSPGCSWIEVK--NRVDVFFSGDSSSTRRIEIYKTLSSLKSNME 1229
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 281/574 (48%), Gaps = 22/574 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN-----PDIVSWNTVLSGFEKS---DDALSFALRMNLIG 52
+NMY K G AL +F+ ++ PDI WN V+ G+ K ++ L+ RM +G
Sbjct: 483 INMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELG 542
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
+ D + S L C ++ G Q+H I++ + + Y+ ALI MYS R +EA
Sbjct: 543 IRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAW 602
Query: 113 RVFDEMPNKDS-VSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACG 170
+F ++ N+ + V+WN ++ G+ ++G + E L L + + + +L SFT A +AC
Sbjct: 603 SLFGKLENRSNIVAWNVMIGGFVENGMW--EKSLELYSLAKNENCKLVSASFTGAFTACS 660
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
H + L+ G+Q+H IKM + V L++ Y+K DA KVF ++ D+ V
Sbjct: 661 HGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNA 720
Query: 231 MISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MIS DA+ L+ +M+ + T L+ S+ GR +H IK +
Sbjct: 721 MISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRS 780
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
S ++ + L+TMY + S +D++ VF + R++++W ++I+G+ QN A+ F
Sbjct: 781 MQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFR 840
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ KE K ++ SV++A E++ L H H IK GL+SD V +L+DMY K
Sbjct: 841 AMEKEGVKADSDVMTSVISAGLGLENVELGH--LIHGFAIKRGLESDVFVACSLVDMYSK 898
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G ++ VF+ K+ AW ++IS + +G E +N ++ G DS++ +V
Sbjct: 899 FGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTV 958
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L + KG+ L ++ I + ++DM + G L+ A+ + +P
Sbjct: 959 LVAVSSVAALLKGKTLHAYQIR-LQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRR- 1016
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPA 558
L S++ HGN E R+ + + E A
Sbjct: 1017 NLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETA 1050
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/477 (29%), Positives = 234/477 (49%), Gaps = 20/477 (4%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ + L C G +H+ IV GL S+ Y+ +LI MY + G L A +VFD+M
Sbjct: 443 TFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKM 502
Query: 119 P-NKDSVS----WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
++DS WN ++ GY + G + E + M G+R D S + C
Sbjct: 503 SESRDSAPDITVWNPVIDGYFKYGHFE-EGLAQFCRMQELGIRPDGYSLSIVLGICNRLS 561
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMI 232
G+QIHG I+ + + L+ YS C +A +F ++ +R N+++W MI
Sbjct: 562 WYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMI 621
Query: 233 SMNREDAVSLFKEMRLDGVCPND------VTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
E+ + K + L + N+ +F G A S G ++ GR +H IK NF
Sbjct: 622 GGFVENGM-WEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNF 680
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+P VC L+TMYA+ S++D++KVFD++ +E+ NA+IS + NG + A+ +
Sbjct: 681 QDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDAL-GLYN 739
Query: 347 VIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+K E+ +++T S+L+ G + S G+ H+ +IK + S+ + SALL MY K
Sbjct: 740 KMKAGETPVDSFTISSLLS--GCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYK 797
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GS ++ VF +E+ AW ++I+ ++ ++ ++ F+ ME +GV+ DS SV
Sbjct: 798 CGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSV 857
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
++ + G HL +E +VDM + G E AE + +P
Sbjct: 858 ISAGLGLENVELG-HLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP 913
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 210/642 (32%), Positives = 349/642 (54%), Gaps = 28/642 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALS-FALRMNLIGVVFDAVT 59
+ + G D+A IF +L + V+ N ++ G + D +A+ F N + V +A T
Sbjct: 320 FARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDV--NADT 377
Query: 60 YSTALS----FCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRV 114
Y LS + + EG G +H +++ GL D ++ V N L+ MY++ G + A ++
Sbjct: 378 YVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKI 437
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F M D +SWN I+S Q+G+ EA++ M + + + + S+ S+C K
Sbjct: 438 FQLMEATDRISWNTIISALDQNGNCE-EAVMHYSLMRQSCISPSNFALISSLSSCAGLKL 496
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L G+Q+H ++K G SV NVL+ Y +C D KVF M + + +SW TM+ +
Sbjct: 497 LTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGV 556
Query: 235 NRE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ V +F M G+ PN VTFI L+ A+S ++++ G+ +H +K +
Sbjct: 557 MASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVME 616
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ V N LI+ YA+ M E +F +S R+ ISWN++ISGY NG A+ + +
Sbjct: 617 DNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLM 676
Query: 348 IKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
I + + TF +LNA + +L+ G H+ I+ L+SD +V SAL+DMY K G
Sbjct: 677 IHSGQIMDCCTFSIILNACASVA--ALERGMELHAFGIRSHLESDVVVESALVDMYSKCG 734
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ + ++FN +++EF+W ++IS ARHG + F+EM PD +TF+SVL+
Sbjct: 735 RVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLS 794
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G++ +G F+ M+ D+ I P +HYSC++D+LGR G++++ +E + ++P P
Sbjct: 795 ACSHAGLVERGLEYFE-MMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNA 853
Query: 527 SVLQSLLGACRIH---GNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
+ +++L ACR N+++G + L+++EP +YVL SN +A G WE A R
Sbjct: 854 LIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKAR 913
Query: 584 KGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
M+ +KE G SW + DG+H F +GD +HP ++EIY
Sbjct: 914 TAMRQATEKKEAGRSWVTLN--DGVHTFIAGDRSHPNTKEIY 953
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 253/513 (49%), Gaps = 31/513 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF------EKSDDALSFALRMNLIGVV 54
+N Y K + A +F+ + + VSW ++SG+ E++ LR G
Sbjct: 103 VNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCR 162
Query: 55 FDAVTYSTALSFCLD--HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW--GRLVE 110
+ T+ T L C D + F +Q+H L+ K S V NALI+MY G +
Sbjct: 163 PTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPIL 222
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-----LRLDHVSFTSA 165
A+RVFD P +D ++WNA++S Y + GD V + L + M++G LR +F S
Sbjct: 223 AQRVFDGTPIRDLITWNALMSVYAKKGD--VASTFTLFKDMQRGDSRIQLRPTEHTFGSL 280
Query: 166 AS-ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
+ A + + Q+ +K G + + VG+ L+S +++ +T +A +F + +N
Sbjct: 281 ITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKN 340
Query: 225 VISWTTMI-SMNRED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE----GR 275
++ +I + R+D AV +F R + V N T++ L+ A++ ++ +E GR
Sbjct: 341 AVTLNGLIVGLVRQDFSEEAVKIFVGTR-NTVDVNADTYVVLLSALAEYSISEEGLRIGR 399
Query: 276 MIHGLCIKTNFLS-EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
++HG ++T + +V N L+ MYA+ +++ + K+F + + ISWN +IS QN
Sbjct: 400 VVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQN 459
Query: 335 GLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
G AV + ++++S + F + + A L GQ+ H +K GLD D V
Sbjct: 460 GNCEEAVM-HYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSV 518
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA-RHGDYESVMNQFKEMENKG 453
+ L+ MYG+ G++ + +VFN E E +W ++ +A ++ F M G
Sbjct: 519 SNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGG 578
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ P+ +TF+++L ++ G+ + +++K
Sbjct: 579 LIPNKVTFINLLAALSPLSVLELGKQVHAAVMK 611
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 222/455 (48%), Gaps = 24/455 (5%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG- 137
LH ++K GL+ ++++ N L+ Y++ RL A +VFDEMP +++VSW ++SGY G
Sbjct: 83 LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142
Query: 138 -DYGVEAILALIEMMRKGLRLDHVSFTSAASAC--GHEKNLELGKQIHGVSIKMGYGTHV 194
+ A++ ++ G R +F + AC G L Q+HG+ K Y ++
Sbjct: 143 AEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNT 202
Query: 195 SVGNVLMSTYSKCEVTGD--ANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM- 246
+V N L+S Y C V A +VF R++I+W ++S+ + +LFK+M
Sbjct: 203 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQ 262
Query: 247 RLDG---VCPNDVTFIGLI---HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
R D + P + TF LI S + V + ++ +K+ S+ V + L++ +
Sbjct: 263 RGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLV--WVLKSGCSSDLYVGSALVSAF 320
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
AR +++ +F L + ++ N LI G + S AV+ F G NA T+
Sbjct: 321 ARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVV 380
Query: 361 VLNAVG--AAEDISLKHGQRCHSHIIKVGL-DSDPIVGSALLDMYGKRGSIFESQRVFNE 417
+L+A+ + + L+ G+ H H+++ GL D V + L++MY K G+I + ++F
Sbjct: 381 LLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQL 440
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
+ +W IISAL ++G+ E + + M + P + +S L+ C ++ G
Sbjct: 441 MEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAG 500
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
+ + +K + ++ + +V M G G + +
Sbjct: 501 QQVHCDAVK-WGLDLDTSVSNVLVKMYGECGAMSD 534
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 196/422 (46%), Gaps = 35/422 (8%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN--- 235
+ +H IK G + + N L+++Y+K A++VF M +RN +SWT ++S
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140
Query: 236 --REDAVSLFKEMRLD---GVCPNDVTFIGLIHAISIGNLVKEG--RMIHGLCIKTNFLS 288
E+A +F+ M + G P TF L+ A G + G +HGL KT + S
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYAS 200
Query: 289 EPSVCNCLITMYARFESMQD--SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+VCN LI+MY +++VFD R++I+WNAL+S YA+ G +A+ F
Sbjct: 201 NTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKG-DVASTFTLFK 259
Query: 347 VIK------ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
++ + +P +TFGS++ A + S Q ++K G SD VGSAL+
Sbjct: 260 DMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQ-VLVWVLKSGCSSDLYVGSALVS 318
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
+ + G E++ +F ++K+ +I L R E + F N V ++ T
Sbjct: 319 AFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNADT 377
Query: 461 FLSVLTVCGRNGMIHKGR--------HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
++ +L+ + +G H+ + L D I S + +V+M + G +E
Sbjct: 378 YVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVS----NGLVNMYAKCGAIES 433
Query: 513 AEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAE 572
A ++ + +S +++ A +GN E + +LM+ ++ L+S+L +
Sbjct: 434 ASKIFQLMEATDRIS-WNTIISALDQNGNCEEAV-MHYSLMRQSCISPSNFALISSLSSC 491
Query: 573 KG 574
G
Sbjct: 492 AG 493
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 35/219 (15%)
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H +IK GL+ D + + L++ Y K + + +VF+E E++ +WT ++S HG
Sbjct: 84 HVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIA 143
Query: 440 ESVMNQFKEMENK---GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
E F+ M + G RP S TF ++L C G PD
Sbjct: 144 EEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGG---------------------PDR 182
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
V + G V + E A + L S+ G+C + G + +R+ D +
Sbjct: 183 LGFAVQVHGLVSKTEYASNTT-------VCNALISMYGSCTV-GPPILAQRVFDGTPIRD 234
Query: 557 PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
++ + ++YA+KGD L K M+ R ++
Sbjct: 235 LI---TWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQL 270
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 210/667 (31%), Positives = 348/667 (52%), Gaps = 38/667 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K +F ++L +F + + VSW+ +++G +++ AL F M +
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 281
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y++ L C G QLH+ +K ++ V A + MY++ + +A+ +FD
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
N + S+NA+++GY+Q+ ++G +A+L +M GL D +S + AC K L
Sbjct: 342 SENLNRQSYNAMITGYSQE-EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G QI+G++IK V V N + Y KC+ +A +VF M R+ +SW +I+ + +
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 460
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + LF M + P++ TF ++ A + G+L G IH +K+ S SV
Sbjct: 461 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL-GYGMEIHSSIVKSGMASNSSV 519
Query: 293 CNCLITMYARFESMQDSEKVFDELSCRE--------------------IISWNALISGYA 332
LI MY++ ++++EK+ R +SWN++ISGY
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 579
Query: 333 QNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
S A Q F + E P+ +T+ +VL+ L G++ H+ +IK L S
Sbjct: 580 MKEQSEDA-QMLFTRMMEMGITPDKFTYATVLDTCANLASAGL--GKQIHAQVIKKELQS 636
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D + S L+DMY K G + +S+ +F ++ + W A+I A HG E + F+ M
Sbjct: 637 DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+ ++P+ +TF+S+L C G+I KG F M +DY ++P HYS MVD+LG+ G++
Sbjct: 697 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 756
Query: 511 EEAEELVGQIPGGPGLSVLQSLLGACRIH-GNVEMGERIADALMKMEPAGSGSYVLMSNL 569
+ A EL+ ++P + ++LLG C IH NVE+ E AL++++P S +Y L+SN+
Sbjct: 757 KRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNV 816
Query: 570 YAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
YA+ G WE V+ LR+ M+ ++KE G SW ++ D LH F GD HPR EEIY
Sbjct: 817 YADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELK--DELHVFLVGDKAHPRWEEIYEELG 874
Query: 630 CLGSEMK 636
+ SEMK
Sbjct: 875 LIYSEMK 881
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 272/544 (50%), Gaps = 38/544 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS---FALRMNLIGVVFDA 57
+N Y KS KA FN + D+VSWN++LSG+ ++ ++L + M G+ FD
Sbjct: 121 INGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDG 180
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L C E G+Q+H ++V+ G D++V +AL+ MY++ R VE+ RVF
Sbjct: 181 RTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG 240
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P K+SVSW+AI++G Q+ + A+ EM + + + S +C L L
Sbjct: 241 IPEKNSVSWSAIIAGCVQNNLLSL-ALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 299
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G Q+H ++K + V + Y+KC+ DA +F + N S+ MI+ +
Sbjct: 300 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 359
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+ LF + G+ ++++ G+ A ++ + EG I+GL IK++ + V
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N I MY + +++ ++ +VFDE+ R+ +SWNA+I+ + QNG + F +++
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ +TFGS+L A SL +G HS I+K G+ S+ VG +L+DMY K G I E+
Sbjct: 480 EPDEFTFGSILKACTGG---SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 412 QRVFNE---------TQEKSE-----------FAWTAIISALARHGDYESVMNQFKEMEN 451
+++ + T E+ E +W +IIS E F M
Sbjct: 537 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 596
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGR 509
G+ PD T+ +VL C G+ + ++K E D Y C +VDM + G
Sbjct: 597 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGD 653
Query: 510 LEEA 513
L ++
Sbjct: 654 LHDS 657
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 224/432 (51%), Gaps = 11/432 (2%)
Query: 91 EVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEM 150
+V N +I YS+ + +A F+ MP +D VSWN++LSGY Q+G+ +++I ++M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGE-SLKSIEVFVDM 171
Query: 151 MRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
R+G+ D +F C ++ LG QIHG+ +++G T V + L+ Y+K +
Sbjct: 172 GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRF 231
Query: 211 GDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAI 265
++ +VF+ + ++N +SW+ +I+ ++ A+ FKEM+ + + ++ +
Sbjct: 232 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 291
Query: 266 SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWN 325
+ + ++ G +H +K++F ++ V + MYA+ ++MQD++ +FD S+N
Sbjct: 292 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYN 351
Query: 326 ALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHII 384
A+I+GY+Q A+ F ++ + + V A + +S G + + I
Sbjct: 352 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLS--EGLQIYGLAI 409
Query: 385 KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMN 444
K L D V +A +DMYGK ++ E+ RVF+E + + +W AII+A ++G +
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 469
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDML 504
F M + PD TF S+L C G + G + S++K S S ++DM
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCS-LIDMY 527
Query: 505 GRVGRLEEAEEL 516
+ G +EEAE++
Sbjct: 528 SKCGMIEEAEKI 539
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 134/309 (43%), Gaps = 43/309 (13%)
Query: 217 FRRMH-DRNVISW----TTMISMNREDAVSLFKEM--RLDGVCPNDVTFIGLIHAISIGN 269
R +H R+V+S+ T IS R + S F + +++ V + +F+ +
Sbjct: 5 LRLLHMTRSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFV--FKECAKQG 62
Query: 270 LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI- 328
++ G+ H I + F V NCL+ +Y + VFD++ R+++SWN +I
Sbjct: 63 ALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMIN 122
Query: 329 ------------------------------SGYAQNGLSLAAVQAFFGVIKES-KPNAYT 357
SGY QNG SL +++ F + +E + + T
Sbjct: 123 GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 182
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
F +L ED SL G + H +++VG D+D + SALLDMY K ES RVF
Sbjct: 183 FAIILKVCSFLEDTSL--GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG 240
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
EK+ +W+AII+ ++ + FKEM+ + SVL C + G
Sbjct: 241 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300
Query: 478 RHLFDSMLK 486
L LK
Sbjct: 301 GQLHAHALK 309
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 172/394 (43%), Gaps = 46/394 (11%)
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR 219
+F+ C + LELGKQ H I G+ V N L+ Y+ A+ VF +
Sbjct: 49 TNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDK 108
Query: 220 MHDRNVISWTTMIS-----------------MNREDAVS-------------------LF 243
M R+V+SW MI+ M D VS +F
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
+M +G+ + TF ++ S G IHG+ ++ ++ + L+ MYA+
Sbjct: 169 VDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNA----YTFG 359
+ +S +VF + + +SW+A+I+G QN L L+ FF ++ K NA +
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNL-LSLALKFFKEMQ--KVNAGVSQSIYA 285
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
SVL + A ++ L G + H+H +K +D IV +A LDMY K ++ ++Q +F+ ++
Sbjct: 286 SVLRSCAALSELRL--GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
+ ++ A+I+ ++ + F + + G+ D I+ V C + +G
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
++ +K + + +DM G+ L EA
Sbjct: 404 IYGLAIKS-SLSLDVCVANAAIDMYGKCQALAEA 436
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 201/616 (32%), Positives = 339/616 (55%), Gaps = 27/616 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF----------EKSDDALSFALRMNL 50
++MY K G+ A IF+ + D +SW T+++G+ + D+ ++MN
Sbjct: 269 IDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNK 328
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
I VV ++V +T + G ++H+ ++ G+ S++ V +++MY++ G L +
Sbjct: 329 ISVV-NSVLAAT------ETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKK 381
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A+ F + +D V W+A LS Q G Y EA+ EM +GL+ D +S SAC
Sbjct: 382 AKEFFLSLEGRDLVVWSAFLSALVQAG-YPGEALSIFQEMQHEGLKPDKTILSSLVSACA 440
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ LGK +H IK G+ +SV L+S Y++C+ A +F RMH ++V++W T
Sbjct: 441 EISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNT 500
Query: 231 MISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I+ + A+ +F ++L GV P+ T + L+ A ++ + + G HG IK
Sbjct: 501 LINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNG 560
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFD-ELSCREIISWNALISGYAQNGLSLAAVQAF 344
SE V LI MYA+ S+ +E +F ++ +SWN +I+GY NG + A+ F
Sbjct: 561 IESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTF 620
Query: 345 FGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ ES +PN TF ++L AV L+ H+ II++G S ++G++L+DMY
Sbjct: 621 NQMKLESVRPNLVTFVTILPAVSYLS--ILREAMAFHACIIRMGFISSTLIGNSLIDMYA 678
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G + S++ F+E + K +W A++S A HG E + F M+ V DS++++S
Sbjct: 679 KSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYIS 738
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL+ C G+I +GR++F SM + +++EPS +HY+CMVD+LG G +E L+ ++P
Sbjct: 739 VLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTE 798
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
P V +LLGAC++H NV++GE L+K+EP + Y+++S++YA+ G W R
Sbjct: 799 PDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRTR 858
Query: 584 KGMKSKGVRKEVGFSW 599
M G++K G+SW
Sbjct: 859 SNMTDHGLKKNPGYSW 874
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 156/579 (26%), Positives = 303/579 (52%), Gaps = 25/579 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNL-IGVVFD 56
++MYCK G D A +F+ + D+ SWN ++SG +S +AL RM + GV D
Sbjct: 169 VDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPD 228
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVK---FGLDSEVYVGNALITMYSRWGRLVEARR 113
+V+ E +H +V+ FG+ V N+LI MYS+ G + A +
Sbjct: 229 SVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGV-----VSNSLIDMYSKCGEVKLAHQ 283
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
+FD+M KD +SW +++GY G Y E + L EM RK ++++ +S ++ A +
Sbjct: 284 IFDQMWVKDDISWATMMAGYVHHGCY-FEVLQLLDEMKRKHIKMNKISVVNSVLAATETR 342
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+LE GK++H ++++G + + V ++S Y+KC A + F + R+++ W+ +S
Sbjct: 343 DLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLS 402
Query: 234 MNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ +A+S+F+EM+ +G+ P+ L+ A + + + G+M+H IK + S
Sbjct: 403 ALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGS 462
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV- 347
+ SV L++MY R +S + +F+ + +++++WN LI+G+ + G A++ F +
Sbjct: 463 DISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQ 522
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ +P++ T S+L+A +D+ L G H +IIK G++S+ V AL+DMY K GS
Sbjct: 523 LSGVQPDSGTMVSLLSACALLDDLYL--GICFHGNIIKNGIESEMHVKVALIDMYAKCGS 580
Query: 408 IFESQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ ++ +F+ + K E +W +I+ +G ++ F +M+ + VRP+ +TF+++L
Sbjct: 581 LCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILP 640
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
++ + +++ I + S ++DM + G+L +E+ ++ +
Sbjct: 641 AVSYLSILREAMAFHACIIRMGFISSTLIGNS-LIDMYAKSGQLSYSEKCFHEMENKGTI 699
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKME-PAGSGSYV 564
S ++L +HG E+ + + + P S SY+
Sbjct: 700 S-WNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYI 737
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 256/510 (50%), Gaps = 18/510 (3%)
Query: 18 NNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFL 74
N++ NP ++ WN+++ + + +A+ M+ +G+ D T++ L C F
Sbjct: 85 NSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFH 144
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
G+ +H I L+ +V++G L+ MY + G L AR+VFD+MP KD SWNA++SG +
Sbjct: 145 EGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLS 204
Query: 135 QDGDYGVEAILALIEM-MRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG-YGT 192
Q + EA+ M M +G+ D VS + A A ++++ K IHG ++ +G
Sbjct: 205 QSSN-PCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGV 263
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMR 247
V N L+ YSKC A+++F +M ++ ISW TM++ + + L EM+
Sbjct: 264 ---VSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMK 320
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
+ N ++ + + A + +++G+ +H ++ S+ V +++MYA+ ++
Sbjct: 321 RKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELK 380
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVG 366
+++ F L R+++ W+A +S Q G A+ F + E KP+ S+++A
Sbjct: 381 KAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSA-- 438
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
AE S + G+ H ++IK + SD V + L+ MY + S + +FN K AW
Sbjct: 439 CAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAW 498
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+I+ + GD + F ++ GV+PDS T +S+L+ C ++ G +++K
Sbjct: 499 NTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIK 558
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ IE ++DM + G L AE L
Sbjct: 559 N-GIESEMHVKVALIDMYAKCGSLCTAENL 587
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
N S W ++I A +R ++ + ++ M G+ PD TF VL C H
Sbjct: 85 NSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFH 144
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+G + + +E + +VDM ++G L+ A ++ ++PG
Sbjct: 145 EGVAIHQD-IASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPG 190
>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 694
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 204/630 (32%), Positives = 343/630 (54%), Gaps = 19/630 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + +PD SWN++L+ + DA M+ G+ +AL
Sbjct: 47 VFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGLAASTFALGSALRSAAAARR 106
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G QL S V+ GL V+ +AL+ +Y++ GRL +ARRVFD MP ++ VSWNAI++G
Sbjct: 107 PELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAG 166
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
YT D EA+ +EM R G D +F + + L +Q+HG +K G
Sbjct: 167 YT-DSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSAL 225
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLF-KEM 246
+ N ++ YS+C+ D+ K+F + R++ISW +M+ ++A+ F + M
Sbjct: 226 GLVALNAAITAYSQCDALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMM 285
Query: 247 RLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
R G+ P+ +F I S G ++GR IH L IK VCN +I MY RF
Sbjct: 286 RESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFAD 345
Query: 306 ---MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVL 362
M+D+ F L ++ +SWN++++GY+ +GLS A++ FF ++ FG +
Sbjct: 346 NCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALK-FFRCMRAENIRTDEFG-LS 403
Query: 363 NAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
A+ + D++ L+ G++ HS +++ G S+ V S+L+ MY K G + ++++ F E +
Sbjct: 404 AALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKS 463
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
S W +++ A+HG ++V + F EM + V D +TF++++T G++ +G +
Sbjct: 464 SSVPWNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEIL 523
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
++M Y I +HY+C VD+ GR G+L++A+EL+ +P P V +LLGACRIHGN
Sbjct: 524 NTMETRYKIPMRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGN 583
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
+E+ +A L EP +YVL+S++Y+ G W A ++K M+++ + K G+SW +
Sbjct: 584 MELASDVARHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQKVMRNRALSKIPGWSWIE 643
Query: 602 VGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
V + +H F++ D +HPR EI+ M L
Sbjct: 644 VK--NEVHSFNADDRSHPRMVEIFDMLRML 671
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 207/411 (50%), Gaps = 14/411 (3%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H+ ++K G S N L+T YS G L ARRVFDE+P+ D+ SWN++L+ + G +
Sbjct: 15 HATLLKSGASSPT-PWNQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAH 72
Query: 140 GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
+A L M +GL + SA + + ELG Q+ S++ G +V +
Sbjct: 73 R-DAWRLLRAMHARGLAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASA 131
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPN 254
L+ Y+KC GDA +VF M RN++SW +I S +A+ LF EM+ G P+
Sbjct: 132 LLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPD 191
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
TF L+ I+ R +HG +K N IT Y++ +++ DS K+FD
Sbjct: 192 GTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFD 251
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDIS 372
+ R++ISWN+++ YA +GL A++ F +++ES +P+ Y+F S ++ V +
Sbjct: 252 GIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAIS-VCSEHGCD 310
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS---IFESQRVFNETQEKSEFAWTAI 429
+ G+ HS +IK GL+ V +A++ MY + + ++ F+ K +W ++
Sbjct: 311 DQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSM 370
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
++ + HG + F+ M + +R D + L C ++ GR +
Sbjct: 371 LTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQV 421
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 234/504 (46%), Gaps = 64/504 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+++Y K G+ A +F+ + +IVSWN +++G+ K +A+ L M +G V D
Sbjct: 133 LDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDG 192
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L+ + QLH IVK+G + NA IT YS+ L ++R++FD
Sbjct: 193 TTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDG 252
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACG-HEKNL 175
+ ++D +SWN++L Y G EA+ + MMR+ G++ D SFTSA S C H +
Sbjct: 253 IESRDLISWNSMLGAYAYHG-LDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDD 311
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE---VTGDANKVFRRMHDRNVISWTTMI 232
+ G+ IH + IK G V N +++ Y++ + DA F + ++ +SW +M+
Sbjct: 312 QQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSML 371
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ DA+ F+ MR + + ++ + + S +++ GR +H L +++ F
Sbjct: 372 TGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFA 431
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S V + LI MY++ + D+ K F+E + WN+++ GYAQ+G
Sbjct: 432 SNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHG------------ 479
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
A T + N ++ + + D + AL+ Y G
Sbjct: 480 ------QAQTVTDLFN------------------EMLDLEVPLDHVTFVALITAYSHGGL 515
Query: 408 IFESQRVFNETQEKSEFA-----WTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITF 461
+ E + N + + + + + R G +++ KE+ E+ +PD+I +
Sbjct: 516 VDEGSEILNTMETRYKIPMRMEHYACGVDLYGRAGQ----LDKAKELIESMPFQPDAIVW 571
Query: 462 LSVLTVCGRNGMIH----KGRHLF 481
+++L C +G + RHLF
Sbjct: 572 MTLLGACRIHGNMELASDVARHLF 595
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 204/639 (31%), Positives = 342/639 (53%), Gaps = 23/639 (3%)
Query: 13 ALCIFNNLNNPDIVSWNTVLSGFEKSD------DALSFALRMNLIGVVFDAVTYSTALSF 66
A+ +F +I +WN L+ F + D LR + IG D+VT LS
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLR-STIG--HDSVTLVIILSA 903
Query: 67 CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSW 126
+ + G Q+H+L++K V V N+L+ MYS+ G + A + F P D +SW
Sbjct: 904 AVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISW 963
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC--GHE-KNLELGKQIHG 183
N ++S Y Q+ + +EAI +++R GL+ D + S AC G E + LG Q+H
Sbjct: 964 NTMISSYAQN-NLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHV 1022
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNRED 238
+IK G V L+ YSK +A + +D ++ SW ++ S
Sbjct: 1023 YAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRK 1082
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
A+ F M G+ +++T I A +K+G+ I IK F ++ V + ++
Sbjct: 1083 ALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLD 1142
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYT 357
MY + M ++ ++F E+S + ++W +ISGY +NG A+ + + + +P+ YT
Sbjct: 1143 MYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYT 1202
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
F +++ A +L+ G++ H++++K+ D VG++L+DMY K GS+ ++ RVF +
Sbjct: 1203 FATLIKASSCL--TALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRK 1260
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
+ W A++ LA+HG + +N F+ M++ G++PD +TF+ VL+ C +G+ +
Sbjct: 1261 MDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEA 1320
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
FD+M K Y I P +HYSC+VD LGR GR++EAE ++ +P S+ ++LLGACR
Sbjct: 1321 YKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACR 1380
Query: 538 IHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGF 597
G+ E +R+AD L+ ++P+ S +YVL+SN+YA W+ V R MK K V+K+ GF
Sbjct: 1381 TKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGF 1440
Query: 598 SWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
SW DV + +H F D +HP++ IY E L ++
Sbjct: 1441 SWIDVK--NKVHLFVVDDRSHPQASLIYEKIEDLMKRIR 1477
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 234/455 (51%), Gaps = 15/455 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
MNMY K+G A F N D++SWNT++S + +++ +A+ + G+ D
Sbjct: 936 MNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQ 995
Query: 58 VTYSTALSFCL---DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
T ++ L C + E F G Q+H +K G+ ++ +V ALI +YS+ G++ EA +
Sbjct: 996 FTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFL 1055
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
+ D SWNAI+ GY + + +A+ M G+ +D ++ +A A G N
Sbjct: 1056 LHGKYDFDLASWNAIMFGYIK-SNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLIN 1114
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
L+ GKQI +IK+G+ + V + ++ Y KC +A ++F + + ++WTTMIS
Sbjct: 1115 LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISG 1174
Query: 234 ----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + A+S++ MR+ GV P++ TF LI A S +++G+ IH +K ++ +
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLD 1234
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V L+ MY + S+QD+ +VF ++ R+++ WNA++ G AQ+G A+ F +
Sbjct: 1235 HFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQS 1294
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+P+ TF VL+A + S + + + G+ + S L+D G+ G I
Sbjct: 1295 NGIQPDKVTFIGVLSACSHSGLFSEAY-KYFDAMFKTYGITPEIEHYSCLVDALGRAGRI 1353
Query: 409 FESQRVFNETQEKSEFA-WTAIISALARHGDYESV 442
E++ V K+ + + A++ A GD E+
Sbjct: 1354 QEAENVIASMPFKASASMYRALLGACRTKGDAETA 1388
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 130/539 (24%), Positives = 242/539 (44%), Gaps = 50/539 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK-SDDALSFALR-MNLIGVVFDAV 58
+ MY K G A +F+ ++ D+V+WN++L+ + + +D + L L G++ +
Sbjct: 653 ITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFG 712
Query: 59 TYSTALS-----FCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
T L+ GF+ +H VK G + +++V AL+ +Y ++G + +AR
Sbjct: 713 FSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQAR 772
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+FD+MP +D+V WN +L Y ++ + EA+ R G D + G
Sbjct: 773 LLFDKMPERDAVLWNVMLKAYVENS-FQDEALRFFSAFHRSGFFPDFSNLHCVIG--GVN 829
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
++ ++ H +K A K+F N+ +W +
Sbjct: 830 SDVSNNRKRHAEQVK-----------------------AYAMKMFPFDQGSNIFAWNKKL 866
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ A+ FK + + + VT + ++ A + + G IH L IK++F
Sbjct: 867 TEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFA 926
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
V N L+ MY++ + +EK F ++ISWN +IS YAQN L + A+ F +
Sbjct: 927 PVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDL 986
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++ KP+ +T SVL A ++ G + H + IK G+ +D V +AL+D+Y K
Sbjct: 987 LRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKG 1046
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + E++ + + + +W AI+ + + F M G+ D IT + +
Sbjct: 1047 GKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAI 1106
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH----YSCMVDMLGRVGRLEEAEELVGQI 520
G + +G+ ++ Y I+ ++ S ++DM + G + A EL G+I
Sbjct: 1107 KASGCLINLKQGKQ-----IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEI 1160
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 215/463 (46%), Gaps = 55/463 (11%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
G + H+ IV G + Y+ N LITMYS+ G L AR+VFD+ ++D V+WN+IL+ Y
Sbjct: 629 LGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688
Query: 135 QDGDYGVEAILA---LIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
Q D E +L L ++R+ G + ++ C +++ + +HG ++K+G+
Sbjct: 689 QFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKE 245
+ V L++ Y K + G A +F +M +R+ + W M+ +++A+ F
Sbjct: 749 ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSA 808
Query: 246 MRLDGVCPNDVTFIGLIHAI--SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
G P+ +H + + + V R H +K YA
Sbjct: 809 FHRSGFFPD----FSNLHCVIGGVNSDVSNNRKRHAEQVKA---------------YAM- 848
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVL 362
K+F I +WN ++ + G +AA+ F +++ + ++ T +L
Sbjct: 849 -------KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIIL 901
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
+A A+D+ L G++ H+ +IK V ++L++MY K G ++ +++ F + E
Sbjct: 902 SAAVGADDLDL--GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC-----GRNGMIHKG 477
+W +IS+ A++ + F+++ G++PD T SVL C G +
Sbjct: 960 LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQ 1019
Query: 478 RHLFD---SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
H++ ++ D + + ++D+ + G+++EAE L+
Sbjct: 1020 VHVYAIKCGIINDSFVS------TALIDLYSKGGKMDEAEFLL 1056
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 146/327 (44%), Gaps = 20/327 (6%)
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
AI++ +L K G+ H + + L + + N LITMY++ S+ + +VFD+ S R++++
Sbjct: 621 AIAMADL-KLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679
Query: 324 WNALISGYAQNGLSL--AAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRC 379
WN++++ YAQ S ++ F FG+++E + ++ +
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H + +K+G + D V AL+++Y K G + +++ +F++ E+ W ++ A +
Sbjct: 740 HGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQ 799
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP-DHYS 498
+ + F G PD V + G N + R +K Y ++ P D S
Sbjct: 800 DEALRFFSAFHRSGFFPDFSNLHCV--IGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGS 857
Query: 499 CMVDMLGRVGRLEEAEELVGQIPG---------GPGLSVLQSLLGACRIHGNVEMGERIA 549
+ ++ A ++V I G L +L A ++++GE+I
Sbjct: 858 NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917
Query: 550 DALMK--MEPAGSGSYVLMSNLYAEKG 574
++K P S LM N+Y++ G
Sbjct: 918 ALVIKSSFAPVVPVSNSLM-NMYSKAG 943
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 147/360 (40%), Gaps = 41/360 (11%)
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+L+LGK+ H + G + N L++ YSKC A +VF + DR++++W ++++
Sbjct: 626 DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685
Query: 234 M----------NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
N + LF +R G +T L+ + V+ +HG +K
Sbjct: 686 AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
F + V L+ +Y ++ + + +FD++ R+ + WN ++ Y +N A++
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR- 804
Query: 344 FFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
FF S P+ V+ V + D+S + ++ H+ +K
Sbjct: 805 FFSAFHRSGFFPDFSNLHCVIGGVNS--DVS--NNRKRHAEQVKA--------------- 845
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
+ ++F Q + FAW ++ G + ++ FK + + DS+T
Sbjct: 846 --------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTL 897
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +L+ + G + ++K P S M +M + G + AE+ P
Sbjct: 898 VIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLM-NMYSKAGVVYAAEKTFINSP 956
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 204/639 (31%), Positives = 342/639 (53%), Gaps = 23/639 (3%)
Query: 13 ALCIFNNLNNPDIVSWNTVLSGFEKSD------DALSFALRMNLIGVVFDAVTYSTALSF 66
A+ +F +I +WN L+ F + D LR + IG D+VT LS
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLR-STIG--HDSVTLVIILSA 903
Query: 67 CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSW 126
+ + G Q+H+L++K V V N+L+ MYS+ G + A + F P D +SW
Sbjct: 904 AVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISW 963
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC--GHE-KNLELGKQIHG 183
N ++S Y Q+ + +EAI +++R GL+ D + S AC G E + LG Q+H
Sbjct: 964 NTMISSYAQN-NLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHV 1022
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNRED 238
+IK G V L+ YSK +A + +D ++ SW ++ S
Sbjct: 1023 YAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRK 1082
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
A+ F M G+ +++T I A +K+G+ I IK F ++ V + ++
Sbjct: 1083 ALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLD 1142
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYT 357
MY + M ++ ++F E+S + ++W +ISGY +NG A+ + + + +P+ YT
Sbjct: 1143 MYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYT 1202
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
F +++ A +L+ G++ H++++K+ D VG++L+DMY K GS+ ++ RVF +
Sbjct: 1203 FATLIKASSCL--TALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRK 1260
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
+ W A++ LA+HG + +N F+ M++ G++PD +TF+ VL+ C +G+ +
Sbjct: 1261 MDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEA 1320
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
FD+M K Y I P +HYSC+VD LGR GR++EAE ++ +P S+ ++LLGACR
Sbjct: 1321 YKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACR 1380
Query: 538 IHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGF 597
G+ E +R+AD L+ ++P+ S +YVL+SN+YA W+ V R MK K V+K+ GF
Sbjct: 1381 TKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGF 1440
Query: 598 SWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
SW DV + +H F D +HP++ IY E L ++
Sbjct: 1441 SWIDVK--NKVHLFVVDDRSHPQASLIYEKIEDLMKRIR 1477
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 234/455 (51%), Gaps = 15/455 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
MNMY K+G A F N D++SWNT++S + +++ +A+ + G+ D
Sbjct: 936 MNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQ 995
Query: 58 VTYSTALSFCL---DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
T ++ L C + E F G Q+H +K G+ ++ +V ALI +YS+ G++ EA +
Sbjct: 996 FTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFL 1055
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
+ D SWNAI+ GY + + +A+ M G+ +D ++ +A A G N
Sbjct: 1056 LHGKYDFDLASWNAIMFGYIK-SNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLIN 1114
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
L+ GKQI +IK+G+ + V + ++ Y KC +A ++F + + ++WTTMIS
Sbjct: 1115 LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISG 1174
Query: 234 ----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + A+S++ MR+ GV P++ TF LI A S +++G+ IH +K ++ +
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLD 1234
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V L+ MY + S+QD+ +VF ++ R+++ WNA++ G AQ+G A+ F +
Sbjct: 1235 HFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQS 1294
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+P+ TF VL+A + S + + + G+ + S L+D G+ G I
Sbjct: 1295 NGIQPDKVTFIGVLSACSHSGLFSEAY-KYFDAMFKTYGITPEIEHYSCLVDALGRAGRI 1353
Query: 409 FESQRVFNETQEKSEFA-WTAIISALARHGDYESV 442
E++ V K+ + + A++ A GD E+
Sbjct: 1354 QEAENVIASMPFKASASMYRALLGACRTKGDAETA 1388
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 130/539 (24%), Positives = 242/539 (44%), Gaps = 50/539 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK-SDDALSFALR-MNLIGVVFDAV 58
+ MY K G A +F+ ++ D+V+WN++L+ + + +D + L L G++ +
Sbjct: 653 ITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFG 712
Query: 59 TYSTALS-----FCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
T L+ GF+ +H VK G + +++V AL+ +Y ++G + +AR
Sbjct: 713 FSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQAR 772
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+FD+MP +D+V WN +L Y ++ + EA+ R G D + G
Sbjct: 773 LLFDKMPERDAVLWNVMLKAYVENS-FQDEALRFFSAFHRSGFXPDFSNLHCVIG--GVN 829
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
++ ++ H +K A K+F N+ +W +
Sbjct: 830 SDVSNNRKRHAEQVK-----------------------AYAMKMFPFDQGSNIFAWNKKL 866
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ A+ FK + + + VT + ++ A + + G IH L IK++F
Sbjct: 867 TEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFA 926
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
V N L+ MY++ + +EK F ++ISWN +IS YAQN L + A+ F +
Sbjct: 927 PVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDL 986
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++ KP+ +T SVL A ++ G + H + IK G+ +D V +AL+D+Y K
Sbjct: 987 LRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKG 1046
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + E++ + + + +W AI+ + + F M G+ D IT + +
Sbjct: 1047 GKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAI 1106
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH----YSCMVDMLGRVGRLEEAEELVGQI 520
G + +G+ ++ Y I+ ++ S ++DM + G + A EL G+I
Sbjct: 1107 KASGCLINLKQGKQ-----IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEI 1160
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 215/463 (46%), Gaps = 55/463 (11%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
G + H+ IV G + Y+ N LITMYS+ G L AR+VFD+ ++D V+WN+IL+ Y
Sbjct: 629 LGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688
Query: 135 QDGDYGVEAILA---LIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
Q D E +L L ++R+ G + ++ C +++ + +HG ++K+G+
Sbjct: 689 QFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKE 245
+ V L++ Y K + G A +F +M +R+ + W M+ +++A+ F
Sbjct: 749 ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSA 808
Query: 246 MRLDGVCPNDVTFIGLIHAI--SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
G P+ +H + + + V R H +K YA
Sbjct: 809 FHRSGFXPD----FSNLHCVIGGVNSDVSNNRKRHAEQVKA---------------YAM- 848
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVL 362
K+F I +WN ++ + G +AA+ F +++ + ++ T +L
Sbjct: 849 -------KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIIL 901
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
+A A+D+ L G++ H+ +IK V ++L++MY K G ++ +++ F + E
Sbjct: 902 SAAVGADDLDL--GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC-----GRNGMIHKG 477
+W +IS+ A++ + F+++ G++PD T SVL C G +
Sbjct: 960 LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQ 1019
Query: 478 RHLFD---SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
H++ ++ D + + ++D+ + G+++EAE L+
Sbjct: 1020 VHVYAIKCGIINDSFVS------TALIDLYSKGGKMDEAEFLL 1056
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 146/327 (44%), Gaps = 20/327 (6%)
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
AI++ +L K G+ H + + L + + N LITMY++ S+ + +VFD+ S R++++
Sbjct: 621 AIAMADL-KLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679
Query: 324 WNALISGYAQNGLSL--AAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRC 379
WN++++ YAQ S ++ F FG+++E + ++ +
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H + +K+G + D V AL+++Y K G + +++ +F++ E+ W ++ A +
Sbjct: 740 HGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQ 799
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP-DHYS 498
+ + F G PD V + G N + R +K Y ++ P D S
Sbjct: 800 DEALRFFSAFHRSGFXPDFSNLHCV--IGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGS 857
Query: 499 CMVDMLGRVGRLEEAEELVGQIPG---------GPGLSVLQSLLGACRIHGNVEMGERIA 549
+ ++ A ++V I G L +L A ++++GE+I
Sbjct: 858 NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917
Query: 550 DALMK--MEPAGSGSYVLMSNLYAEKG 574
++K P S LM N+Y++ G
Sbjct: 918 ALVIKSSFAPVVPVSNSLM-NMYSKAG 943
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 147/360 (40%), Gaps = 41/360 (11%)
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+L+LGK+ H + G + N L++ YSKC A +VF + DR++++W ++++
Sbjct: 626 DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685
Query: 234 M----------NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
N + LF +R G +T L+ + V+ +HG +K
Sbjct: 686 AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
F + V L+ +Y ++ + + +FD++ R+ + WN ++ Y +N A++
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR- 804
Query: 344 FFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
FF S P+ V+ V + D+S + ++ H+ +K
Sbjct: 805 FFSAFHRSGFXPDFSNLHCVIGGVNS--DVS--NNRKRHAEQVKA--------------- 845
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
+ ++F Q + FAW ++ G + ++ FK + + DS+T
Sbjct: 846 --------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTL 897
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +L+ + G + ++K P S M +M + G + AE+ P
Sbjct: 898 VIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLM-NMYSKAGVVYAAEKTFINSP 956
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 210/667 (31%), Positives = 348/667 (52%), Gaps = 38/667 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K +F ++L +F + + VSW+ +++G +++ AL F M +
Sbjct: 180 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 239
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y++ L C G QLH+ +K ++ V A + MY++ + +A+ +FD
Sbjct: 240 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 299
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
N + S+NA+++GY+Q+ ++G +A+L +M GL D +S + AC K L
Sbjct: 300 SENLNRQSYNAMITGYSQE-EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 358
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G QI+G++IK V V N + Y KC+ +A +VF M R+ +SW +I+ + +
Sbjct: 359 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 418
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + LF M + P++ TF ++ A + G+L G IH +K+ S SV
Sbjct: 419 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL-GYGMEIHSSIVKSGMASNSSV 477
Query: 293 CNCLITMYARFESMQDSEKVFDELSCRE--------------------IISWNALISGYA 332
LI MY++ ++++EK+ R +SWN++ISGY
Sbjct: 478 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 537
Query: 333 QNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
S A Q F + E P+ +T+ +VL+ L G++ H+ +IK L S
Sbjct: 538 MKEQSEDA-QMLFTRMMEMGITPDKFTYATVLDTCANLASAGL--GKQIHAQVIKKELQS 594
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D + S L+DMY K G + +S+ +F ++ + W A+I A HG E + F+ M
Sbjct: 595 DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 654
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+ ++P+ +TF+S+L C G+I KG F M +DY ++P HYS MVD+LG+ G++
Sbjct: 655 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 714
Query: 511 EEAEELVGQIPGGPGLSVLQSLLGACRIH-GNVEMGERIADALMKMEPAGSGSYVLMSNL 569
+ A EL+ ++P + ++LLG C IH NVE+ E AL++++P S +Y L+SN+
Sbjct: 715 KRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNV 774
Query: 570 YAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
YA+ G WE V+ LR+ M+ ++KE G SW ++ D LH F GD HPR EEIY
Sbjct: 775 YADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELK--DELHVFLVGDKAHPRWEEIYEELG 832
Query: 630 CLGSEMK 636
+ SEMK
Sbjct: 833 LIYSEMK 839
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 272/544 (50%), Gaps = 38/544 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS---FALRMNLIGVVFDA 57
+N Y KS KA FN + D+VSWN++LSG+ ++ ++L + M G+ FD
Sbjct: 79 INGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDG 138
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L C E G+Q+H ++V+ G D++V +AL+ MY++ R VE+ RVF
Sbjct: 139 RTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG 198
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P K+SVSW+AI++G Q+ + A+ EM + + + S +C L L
Sbjct: 199 IPEKNSVSWSAIIAGCVQNNLLSL-ALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 257
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G Q+H ++K + V + Y+KC+ DA +F + N S+ MI+ +
Sbjct: 258 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 317
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+ LF + G+ ++++ G+ A ++ + EG I+GL IK++ + V
Sbjct: 318 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 377
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N I MY + +++ ++ +VFDE+ R+ +SWNA+I+ + QNG + F +++
Sbjct: 378 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 437
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ +TFGS+L A SL +G HS I+K G+ S+ VG +L+DMY K G I E+
Sbjct: 438 EPDEFTFGSILKACTGG---SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 494
Query: 412 QRVFNE---------TQEKSE-----------FAWTAIISALARHGDYESVMNQFKEMEN 451
+++ + T E+ E +W +IIS E F M
Sbjct: 495 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 554
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGR 509
G+ PD T+ +VL C G+ + ++K E D Y C +VDM + G
Sbjct: 555 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGD 611
Query: 510 LEEA 513
L ++
Sbjct: 612 LHDS 615
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 224/432 (51%), Gaps = 11/432 (2%)
Query: 91 EVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEM 150
+V N +I YS+ + +A F+ MP +D VSWN++LSGY Q+G+ +++I ++M
Sbjct: 71 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGE-SLKSIEVFVDM 129
Query: 151 MRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
R+G+ D +F C ++ LG QIHG+ +++G T V + L+ Y+K +
Sbjct: 130 GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRF 189
Query: 211 GDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAI 265
++ +VF+ + ++N +SW+ +I+ ++ A+ FKEM+ + + ++ +
Sbjct: 190 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 249
Query: 266 SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWN 325
+ + ++ G +H +K++F ++ V + MYA+ ++MQD++ +FD S+N
Sbjct: 250 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYN 309
Query: 326 ALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHII 384
A+I+GY+Q A+ F ++ + + V A + +S G + + I
Sbjct: 310 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLS--EGLQIYGLAI 367
Query: 385 KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMN 444
K L D V +A +DMYGK ++ E+ RVF+E + + +W AII+A ++G +
Sbjct: 368 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 427
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDML 504
F M + PD TF S+L C G + G + S++K S S ++DM
Sbjct: 428 LFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCS-LIDMY 485
Query: 505 GRVGRLEEAEEL 516
+ G +EEAE++
Sbjct: 486 SKCGMIEEAEKI 497
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 177/400 (44%), Gaps = 43/400 (10%)
Query: 151 MRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
M + LRL H++ + C + LELGKQ H I G+ V N L+ Y+
Sbjct: 1 MAESLRLLHMT---RSVECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDF 57
Query: 211 GDANKVFRRMHDRNVISWTTMIS-----------------MNREDAVS------------ 241
A+ VF +M R+V+SW MI+ M D VS
Sbjct: 58 VSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNG 117
Query: 242 -------LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+F +M +G+ + TF ++ S G IHG+ ++ ++ +
Sbjct: 118 ESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAAS 177
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKP 353
L+ MYA+ + +S +VF + + +SW+A+I+G QN L A++ F + K +
Sbjct: 178 ALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV 237
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ + SVL + A ++ L G + H+H +K +D IV +A LDMY K ++ ++Q
Sbjct: 238 SQSIYASVLRSCAALSELRL--GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQI 295
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F+ ++ + ++ A+I+ ++ + F + + G+ D I+ V C
Sbjct: 296 LFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKG 355
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ +G ++ +K + + +DM G+ L EA
Sbjct: 356 LSEGLQIYGLAIKS-SLSLDVCVANAAIDMYGKCQALAEA 394
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 219/661 (33%), Positives = 348/661 (52%), Gaps = 30/661 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP--DIVSWNTVLSGFEKSD---DALSFALRMNLIGVVF 55
+ MY K G D AL +F L D+ SWN+V+SG ++ +AL+ M G
Sbjct: 206 IGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPM 265
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ T L C + G +LH+ ++K G + + NAL+ MY+++GR+ A RVF
Sbjct: 266 NSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC-NALLVMYAKYGRVDSALRVF 324
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
++ KD +SWN++LS Y Q+ Y EAI EM++ G + DH S +SA GH L
Sbjct: 325 GQIAEKDYISWNSMLSCYVQNSFYA-EAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRL 383
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
G++ H +IK T + VGN LM Y KC + KVF M R+ ISWTT++
Sbjct: 384 NNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACF 443
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG----NLVKEGRMIHGLCIKTNF 286
S +A+ + E++ +G+ D IG I G +L+K+ +H I+
Sbjct: 444 AQSSRHSEALEMILELQKEGIMV-DSMMIGSILETCCGLKSISLLKQ---VHCYAIRNGL 499
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
L + + N LI +Y S +F + ++I+SW ++I+ NG AV F
Sbjct: 500 L-DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTE 558
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ K + +P++ S+L A+ SL G++ H +I+ + V S+L+DMY
Sbjct: 559 MQKANIQPDSVALVSILVAIAGLS--SLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGC 616
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GS+ + RVF + K WTA+I+A HG + ++ FK M G+ PD ++FL++L
Sbjct: 617 GSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALL 676
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
C + ++ +G+H D M+ Y ++P +HY+C+VD+LGR G+ EEA E + +P P
Sbjct: 677 YACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPK 736
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+V +LLGACR+H N + A+ L+++EP G+Y+L+SN++AE G W R
Sbjct: 737 SAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTR 796
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY----RMAECLGSEMKYLNSK 641
M +G+RK SW ++G + +H F+SGD H SE I+ + E L E Y+
Sbjct: 797 MAERGLRKNPACSWIEIG--NNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDT 854
Query: 642 R 642
R
Sbjct: 855 R 855
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 254/526 (48%), Gaps = 22/526 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-----LSFALRMNLI-GVVFD 56
MY + G+ D A +FN + + SWN ++ + S A + A+R + G D
Sbjct: 104 MYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPD 163
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T ++ L C G ++H L VK GLD V NALI MY++ G L A RVF+
Sbjct: 164 GCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFE 223
Query: 117 --EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
+ +D SWN+++SG Q+G +EA+ M G ++ + + C
Sbjct: 224 WLQQDARDVASWNSVVSGCVQNGRT-LEALALFRGMQSAGFPMNSYTSVAVLQVCAELGL 282
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L LG+++H +K G ++ N L+ Y+K A +VF ++ +++ ISW +M+S
Sbjct: 283 LSLGRELHAALLKCGSELNIQC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSC 341
Query: 235 NRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ +A+ F EM G P+ + L A+ + + GR H IK ++
Sbjct: 342 YVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTD 401
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V N L+ MY + S++ S KVF+ + R+ ISW +++ +AQ+ A++ + K
Sbjct: 402 LQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQK 461
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E ++ GS+L + ISL ++ H + I+ GL D I+ + L+D+YG+ G
Sbjct: 462 EGIMVDSMMIGSILETCCGLKSISLL--KQVHCYAIRNGL-LDLILENRLIDIYGECGEF 518
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S +F ++K +WT++I+ +G + F EM+ ++PDS+ +S+L
Sbjct: 519 DHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAI 578
Query: 469 GRNGMIHKGRHLFDSML-KDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ KG+ + ++ +++ IE S +VDM G + A
Sbjct: 579 AGLSSLTKGKQVHGFLIRRNFPIEGPV--VSSLVDMYSGCGSMNYA 622
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 213/409 (52%), Gaps = 22/409 (5%)
Query: 76 GLQLHSLIVKFGL---DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G Q+H+ V G D + ++ L+ MY R GR+ +ARR+F+ MP + SWNA++
Sbjct: 76 GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135
Query: 133 YTQDGDYGVEAIL---ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
Y G G EA+ A+ G D + S ACG E + G ++HG+++K+G
Sbjct: 136 YLSSGSAG-EAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVG 194
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD--RNVISWTTMISMNRE-----DAVSL 242
V N L+ Y+KC + A +VF + R+V SW +++S + +A++L
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALAL 254
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV-CNCLITMYA 301
F+ M+ G N T + ++ + L+ GR +H +K SE ++ CN L+ MYA
Sbjct: 255 FRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCG--SELNIQCNALLVMYA 312
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFG 359
++ + + +VF +++ ++ ISWN+++S Y QN A+ FFG + + +P+
Sbjct: 313 KYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAID-FFGEMLQHGFQPDHACVV 371
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
S+ +A+G L +G+ H++ IK L +D VG+ L+DMY K GSI S +VF
Sbjct: 372 SLSSALGHLS--RLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMG 429
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ +WT I++ A+ + + E++ +G+ DS+ S+L C
Sbjct: 430 IRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETC 478
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 204/633 (32%), Positives = 348/633 (54%), Gaps = 15/633 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N+Y G A F L + I++WN +L G A+ F M GV D
Sbjct: 74 VNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDN 133
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY L C G +H + + VYV A+I M+++ G + +ARR+F+E
Sbjct: 134 YTYPLVLKACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEE 192
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP++D SW A++ G +G+ +EA+L +M +GL D V S ACG + ++L
Sbjct: 193 MPDRDLASWTALICGTMWNGE-CLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKL 251
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
G + +++ G+ + + V N ++ Y KC +A++VF M +V+SW+T+I S
Sbjct: 252 GMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQ 311
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N +++ L+ M G+ N + ++ A+ L+K+G+ +H +K +S+ V
Sbjct: 312 NCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVV 371
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KES 351
+ LI MYA S++++E +F+ S ++I+ WN++I GY G +A F + E
Sbjct: 372 GSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEH 431
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+PN T S+L + +L+ G+ H ++ K GL + VG++L+DMY K G +
Sbjct: 432 RPNFITVVSILPI--CTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELG 489
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
++VF + ++ + +ISA HG E + +++M+ +G RP+ +TF+S+L+ C
Sbjct: 490 EKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHA 549
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G L++SM+ DY IEP+ +HYSCMVD++GR G L+ A + + ++P P +V S
Sbjct: 550 GLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGS 609
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGACR+H VE+ E +A+ +++++ SG YVL+SNLYA WE ++ +R +K KG+
Sbjct: 610 LLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGL 669
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
K+ G SW VG ++ F + HP +I
Sbjct: 670 EKKPGSSWIQVGHC--IYVFHATSAFHPAFAKI 700
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 243/478 (50%), Gaps = 17/478 (3%)
Query: 79 LHSLIVKFGLDSEV-----YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGY 133
LH+L++ G + L+ +Y +G L A F +P+K ++WNAIL G
Sbjct: 49 LHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGL 108
Query: 134 TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
G + +AI M++ G+ D+ ++ AC L+LG+ +H ++ +
Sbjct: 109 VAVGHF-TKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-TMHGKTKAN 166
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRE--DAVSLFKEMRL 248
V V ++ ++KC DA ++F M DR++ SWT +I N E +A+ LF++MR
Sbjct: 167 VYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRS 226
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
+G+ P+ V ++ A VK G + +++ F S+ V N +I MY + +
Sbjct: 227 EGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLE 286
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGA 367
+ +VF + +++SW+ LI+GY+QN L + + + G+I NA SVL A+G
Sbjct: 287 AHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGK 346
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
E LK G+ H+ ++K GL SD +VGSAL+ MY GSI E++ +F T +K W
Sbjct: 347 LE--LLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWN 404
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
++I GD+ES F+ + RP+ IT +S+L +C + G + +G+ + + K
Sbjct: 405 SMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKS 464
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+ + + ++DM + G LE E++ Q+ ++ +++ AC HG E G
Sbjct: 465 -GLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMM-VRNVTTYNTMISACGSHGQGEKG 520
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 222/650 (34%), Positives = 334/650 (51%), Gaps = 55/650 (8%)
Query: 20 LNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQL 79
+PDIV+WN +S ++ S ALR+ +V+Y+ +S L + F L
Sbjct: 41 FKDPDIVTWNKAISSHMRNGHCDS-ALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDL 99
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
+ + +++ N ++T Y R RL EA ++FD MP KD VSWNA+LSGY Q+G
Sbjct: 100 FDKMP----ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNG-- 153
Query: 140 GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
+ E+ K + +S+ +A H L+ +++ + + N
Sbjct: 154 ---FVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRL----FESQSNWELISWNC 206
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPN 254
LM Y K + GDA ++F RM R+VISW TMIS + A LF E + V
Sbjct: 207 LMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDV--- 263
Query: 255 DVTFIGLIHAISIGNLVKEGR---------------------------MIHGLCIKTNFL 287
T+ ++ +V E R +I G +
Sbjct: 264 -FTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPC 322
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S N +IT Y + + + K+FD + R+ +SW A+ISGYAQNG A+ F +
Sbjct: 323 RNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEM 382
Query: 348 IKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++ + N TF L+ A+ +L+ G++ H ++K G ++ VG+ALL MY K G
Sbjct: 383 KRDGESSNRSTFSCALST--CADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCG 440
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
S E+ VF +EK +W +I+ ARHG + F+ M+ GV+PD IT + VL+
Sbjct: 441 STDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLS 500
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G+I +G F SM +DY+++P+ HY+CM+D+LGR GRLEEAE L+ +P PG
Sbjct: 501 ACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGA 560
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
+ +LLGA RIHGN E+GE+ A+ + KMEP SG YVL+SNLYA G W V +R M
Sbjct: 561 ASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKM 620
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ GV+K G+SW +V + +H FS GD HP + IY E L +M+
Sbjct: 621 REAGVQKVTGYSWVEVQ--NKIHTFSVGDCFHPEKDRIYAFLEELDLKMR 668
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 173/336 (51%), Gaps = 21/336 (6%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y + G +A +FN D+ +W ++SG+ ++ D+A + M V + ++Y
Sbjct: 242 YAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEM----PVKNEISY 297
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ L+ + ++ + +L + + S N +IT Y + G + +AR++FD MP
Sbjct: 298 NAMLAGYVQYKKMVIAGELFEAMPCRNISS----WNTMITGYGQNGGIAQARKLFDMMPQ 353
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D VSW AI+SGY Q+G Y EA+ +EM R G + +F+ A S C LELGKQ
Sbjct: 354 RDCVSWAAIISGYAQNGHYE-EALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQ 412
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS------M 234
+HG +K G+ T VGN L+ Y KC T +AN VF + +++V+SW TMI+
Sbjct: 413 VHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGF 472
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEPSVC 293
R+ A+ LF+ M+ GV P+++T +G++ A S L+ G + + N
Sbjct: 473 GRQ-ALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHY 531
Query: 294 NCLITMYARFESMQDSEKVFDELSCRE-IISWNALI 328
C+I + R ++++E + + SW AL+
Sbjct: 532 TCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALL 567
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY K G D+A +F + D+VSWNT+++G+ + AL M GV D
Sbjct: 433 LGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDE 492
Query: 58 VTYSTALSFCLDHEGFL-FGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T LS C H G + G + +S+ + + +I + R GRL EA +
Sbjct: 493 ITMVGVLSAC-SHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLM 551
Query: 116 DEMP-NKDSVSWNAILS-----GYTQDGDYGVEAILAL 147
MP + + SW A+L G T+ G+ E + +
Sbjct: 552 RNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKM 589
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 221/713 (30%), Positives = 346/713 (48%), Gaps = 72/713 (10%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y G D AL + + V WN ++ K D A++ + RM G D T
Sbjct: 61 YLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTL 120
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
L C + + G H LI G +S V++ NAL+ MYSR G L EA +FDE+
Sbjct: 121 PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 180
Query: 121 K---DSVSWNAILSGYTQDGDYGV-----EAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+ D +SWN+I+S + + + + ++ R D +S + ACG
Sbjct: 181 RGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSL 240
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
K + K++HG +I+ G V VGN L+ Y+KC + +A KVF M ++V+SW M+
Sbjct: 241 KAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMV 300
Query: 233 S-----------------MNRE-----------------------DAVSLFKEMRLDGVC 252
+ M +E +A+++F++M G
Sbjct: 301 AGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSL 360
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS----------EPSVCNCLITMYAR 302
PN VT I ++ A + +G IH +K L+ + V N LI MY++
Sbjct: 361 PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 420
Query: 303 FESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKES---KPNAYT 357
S + + +FD++ R +++W +I G+AQ G S A++ F +I E PNAYT
Sbjct: 421 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 480
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDP-IVGSALLDMYGKRGSIFESQRVF 415
+L A A +++ G++ H+++++ DS V + L++MY K G + ++ VF
Sbjct: 481 ISCILMA--CAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVF 538
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ +KS +WT++++ HG ++ F +M G PD ITFL VL C GM+
Sbjct: 539 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 598
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
+G FDSM DY + P +HY+ +D+L R GRL++A + V +P P V +LL A
Sbjct: 599 QGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA 658
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
CR+H NVE+ E + L++M GSY L+SN+YA G W+ VA +R MK G++K
Sbjct: 659 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 718
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
G SW V G F GD +HP S +IY + E L +K + E AL
Sbjct: 719 GCSW--VQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFAL 769
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 156/333 (46%), Gaps = 60/333 (18%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----------------------- 37
++ Y K G + A+ +FN + D+VSWN +++G+ +
Sbjct: 269 IDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDM 328
Query: 38 ---------------SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSL 82
S +AL+ +M G + + VT + LS C F G+++H+
Sbjct: 329 VTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAY 388
Query: 83 IVKF----------GLDSEVYVGNALITMYSRWGRLVEARRVFDEMP--NKDSVSWNAIL 130
+K G D ++ V NALI MYS+ AR +FD++P ++ V+W ++
Sbjct: 389 SLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMI 448
Query: 131 SGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
G+ Q GD +A+ +EM+ + G+ + + + AC H + +GKQIH ++
Sbjct: 449 GGHAQYGDSN-DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRH 507
Query: 189 GY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVS 241
+ V N L++ YSKC A VF M ++ ISWT+M++ +A+
Sbjct: 508 HQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALD 567
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+F +MR G P+D+TF+ +++A S +V +G
Sbjct: 568 IFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 600
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 150/306 (49%), Gaps = 17/306 (5%)
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----SMNRED-AVSLFKEMRLD 249
S+G ++++Y C T A V R+ + W +I R D A+++ M
Sbjct: 52 SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 111
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
G + T ++ A + G HGL F S +CN L+ MY+R S++++
Sbjct: 112 GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 171
Query: 310 EKVFDELSCR---EIISWNALISGYAQNGLSLAAVQAF--FGVIKESKP-----NAYTFG 359
+FDE++ R ++ISWN+++S + ++ + A+ F +I KP + +
Sbjct: 172 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 231
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
++L A G+ + ++ + H + I+ G D VG+AL+D Y K G + + +VFN +
Sbjct: 232 NILPACGSLK--AVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMME 289
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
K +W A+++ ++ G++++ FK M + + D +T+ +V+ + G H+ +
Sbjct: 290 FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 349
Query: 480 LFDSML 485
+F M+
Sbjct: 350 VFRQMI 355
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 209/641 (32%), Positives = 344/641 (53%), Gaps = 27/641 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-----EKSDDALSFALRMNLIGVVF 55
+ Y K G A +F NL + ++VS+N ++ G + S+ L RM ++
Sbjct: 50 IKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILP 109
Query: 56 DAVTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
DA T+ + + G F Q+H L +K +V+VG++L+ Y + G + EAR++
Sbjct: 110 DAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKL 169
Query: 115 FDEMPNKDSVSWNAILSGYTQDG----DYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
FD MP ++ VSW ++SGY GV ++ L+E L+ FTS SA
Sbjct: 170 FDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEG-----NLNEFVFTSVLSALV 224
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ ++ GKQ+H V +K G VSV N L++ Y+KC + +F D+N I+W+
Sbjct: 225 CPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSA 284
Query: 231 MISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I+ + A+ LF +M G P++ T +G++ A S ++EG+ HG +K+
Sbjct: 285 LITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSG 344
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ ++ L+ MYA+F D+ K FD L +++ W ++I+GY QNG + A+ + +
Sbjct: 345 YETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEAL-SMY 403
Query: 346 GVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
G ++ K PN T SVL A + +L+ G++ H+ IK GL + + SAL MY
Sbjct: 404 GRMQMRKILPNELTMASVLKA--CSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYA 461
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K GS+ E +F ++ +W A+IS L+++G + F+EM +G +PD ITF++
Sbjct: 462 KCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVT 521
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL+ C G++ +G F+ M ++ + P +HY+CMVD+L R G+L EA+E +
Sbjct: 522 VLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIID 581
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
G+ + + LL ACR H N E+G + LM++ S +YVL+S++Y G V +R
Sbjct: 582 HGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVR 641
Query: 584 KGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
+ MK +GVRKE G SW ++ +H F GD HP+ EEI
Sbjct: 642 RMMKVRGVRKETGCSWIELK--SHVHVFVVGDQIHPQIEEI 680
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 234/457 (51%), Gaps = 20/457 (4%)
Query: 69 DHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN 127
D + G LH+ I+K L S Y+ N LI Y++ G L A+ VF+ + +K+ VS+N
Sbjct: 19 DQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYN 78
Query: 128 AILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLELG-----KQI 181
++ G + +G G +L L M+ + D +F +A L LG +Q+
Sbjct: 79 CLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAA----LNLGCNFDARQV 134
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNR 236
H + IK V VG+ L++ Y K +A K+F RM +RN++SWTTMIS
Sbjct: 135 HVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMA 194
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
++A+ +F MRL N+ F ++ A+ V G+ +H + +K L SV N L
Sbjct: 195 KEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNAL 254
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
+TMYA+ ++ S +F+ S + I+W+ALI+GY+Q G S A++ F + P+
Sbjct: 255 VTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSE 314
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+T VL A ++ +++ G++ H +++K G ++ +AL+DMY K G ++++ F
Sbjct: 315 FTLVGVLKA--CSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGF 372
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ E WT+II+ ++G E ++ + M+ + + P+ +T SVL C +
Sbjct: 373 DFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALE 432
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
+G+ + +K Y + P S + M + G LEE
Sbjct: 433 QGKQIHARTIK-YGLGPELSIRSALSTMYAKCGSLEE 468
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 9/223 (4%)
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS-VCNCLITMYARFESMQDSEK 311
P + +F L+ + +K+G+++H IK +LS + + N LI YA+ + ++
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 312 VFDELSCREIISWNALISGYAQNGL--SLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
VF+ L + ++S+N LI G + NG S ++ F +I + P+A+TF V A AA
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTA--AA 122
Query: 369 EDISLKHGQR-CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
++ R H IK D VGS+L++ Y K G +FE++++F+ E++ +WT
Sbjct: 123 LNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWT 182
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT--VC 468
+IS A + + F M + F SVL+ VC
Sbjct: 183 TMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVC 225
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFES 411
P +F ++L + A+ SLK GQ H+HIIK+ L S + + L+ Y K G + +
Sbjct: 5 PQNRSFYNLL--IQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGA 62
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYES--VMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ VF + K+ ++ +I L+ +G S V+ F+ M + PD+ TF V T
Sbjct: 63 KLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAA 122
Query: 470 RN-GMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
N G R + +K I+ D + S +V+ +VG + EA +L ++P
Sbjct: 123 LNLGCNFDARQVHVLGIKTASID---DVFVGSSLVNFYCKVGCVFEARKLFDRMP 174
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 208/665 (31%), Positives = 356/665 (53%), Gaps = 30/665 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDAVTY 60
YC+ G A + + + + VS+N ++ + + A L R GV D +Y
Sbjct: 53 YCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSY 112
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ AL+ C G +H+L + GL S V+V N+L++MYS+ G + EARRVFD
Sbjct: 113 AAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEE 172
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGH--EKNLEL 177
+D VSWN+++SGY + G E ++ + MMR+G + L+ + S C + +++
Sbjct: 173 RDDVSWNSLVSGYVRAG--AREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDI 230
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
+ +HG IK G + V + + ++ Y+K +A +FR + + NV+ + TMI+
Sbjct: 231 AEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCR 290
Query: 234 ----MNRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+ +E +A++L+ E++ G+ P + TF ++ A ++ ++ G+ IHG IK F
Sbjct: 291 TETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTF 350
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ + + LI +Y M+D + F +I++W A++SG QN L A+ F
Sbjct: 351 QEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHE 410
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ KP+ +T SV+NA A + G++ K G D ++G++ + MY +
Sbjct: 411 SLGAGLKPDLFTISSVMNA--CASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARS 468
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + + R F E + +W+A+IS A+HG ++ F EM + V P+ ITFL VL
Sbjct: 469 GDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVL 528
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
T C G++ +G +++M KDY + P+ H +C+VD+LGR GRL +AE +
Sbjct: 529 TACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHAD 588
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ +SLL +CRIH ++E G+ +A+ +M++EP S SYV++ N+Y + G+ + + R
Sbjct: 589 PVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDL 648
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLN------ 639
MK +GV+KE G SW ++ G+H F +GD +HP S IY E + S ++ L
Sbjct: 649 MKQRGVKKEPGLSWIELK--CGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLATTDTEI 706
Query: 640 SKRER 644
SKRE+
Sbjct: 707 SKREQ 711
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 203/410 (49%), Gaps = 27/410 (6%)
Query: 90 SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
+ +++ N L+ Y R G + ARR+ DEMP +++VS+N ++ Y+++G ++ L
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREG-LAPLSLETLAR 99
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
R G+ +D S+ +A +AC +L G+ +H ++I G + V V N L+S YSKC
Sbjct: 100 ARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGE 159
Query: 210 TGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
G+A +VF +R+ +SW +++S RE+ V +F MR G+ N +I
Sbjct: 160 MGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKC 219
Query: 265 IS--IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
S + +HG IK S+ + + +I MYA+ ++ ++ +F + ++
Sbjct: 220 CSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVV 279
Query: 323 SWNALISGY-----------AQNGLSL-AAVQAFFGVIKESKPNAYTFGSVLNAVGAAED 370
+N +I+G+ A L+L + VQ+ + +P +TF SVL A A
Sbjct: 280 MFNTMIAGFCRTETVIGKEVASEALTLYSEVQS-----RGMQPTEFTFSSVLRACNLAG- 333
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
L+ G++ H +IK D +GSAL+D+Y G + + R F + + WTA++
Sbjct: 334 -YLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMV 392
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
S ++ +E ++ F E G++PD T SV+ C + G +
Sbjct: 393 SGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI 442
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 231/473 (48%), Gaps = 27/473 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G+ +A +F+ D VSWN+++SG+ ++ ++ + M G+ ++
Sbjct: 151 VSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNS 210
Query: 58 VTYSTALSFCLDH-EGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ + C +G + +H ++K GLDS+V++ +A+I MY++ G LVEA +F
Sbjct: 211 FALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALF 270
Query: 116 DEMPNKDSVSWNAILSGYTQD-----GDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
+ + V +N +++G+ + + EA+ E+ +G++ +F+S AC
Sbjct: 271 RSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACN 330
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
LE GKQIHG IK + +G+ L+ Y D + FR ++++WT
Sbjct: 331 LAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTA 390
Query: 231 MIS---MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
M+S N E A+SLF E G+ P+ T +++A + + + G I K+
Sbjct: 391 MVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSG 450
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F + N + MYAR + + + F E+ +++SW+A+IS +AQ+G + A+ FF
Sbjct: 451 FDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALH-FF 509
Query: 346 GVIKESK--PNAYTFGSVLNAV--GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
+ ++K PN TF VL A G D L++ + + GL + ++D+
Sbjct: 510 DEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNK---DYGLSPTIKHCTCVVDL 566
Query: 402 YGKRGSIFESQR-VFNETQEKSEFAWTAIISALARHGDYES---VMNQFKEME 450
G+ G + +++ + N W +++++ H D E V N+ E+E
Sbjct: 567 LGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELE 619
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 6/247 (2%)
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N L+ Y R + ++ DE+ R +S+N LI Y++ GL+ +++ + +
Sbjct: 47 NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLET-LARARRAGV 105
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ F + L+ G+ H+ I GL S V ++L+ MY K G + E++R
Sbjct: 106 DVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARR 165
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC-GR-N 471
VF+ +E+ + +W +++S R G E ++ F M G+ +S SV+ C GR +
Sbjct: 166 VFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGD 225
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + + ++K ++ S M+DM + G L EA L + P + + +
Sbjct: 226 GTMDIAEAVHGCVIK-AGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPNVVMFNT 283
Query: 532 LL-GACR 537
++ G CR
Sbjct: 284 MIAGFCR 290
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 211/659 (32%), Positives = 365/659 (55%), Gaps = 23/659 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFD 56
++MY K+ A +F+ D V WN++LS + KS + L M++ G +
Sbjct: 224 VSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPN 283
Query: 57 AVTYSTALSFCLDHEGFLF---GLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEAR 112
+ T +AL+ C +GF + G ++H+ ++K SE+YV NALI MY+R G++ +A
Sbjct: 284 SYTIVSALTAC---DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAE 340
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
R+ +M N D V+WN+++ GY Q+ Y EA+ +M+ G + D VS TS +A G
Sbjct: 341 RILRQMNNADVVTWNSLIKGYVQNLMYK-EALEFFSDMIAAGHKSDEVSMTSIIAASGRL 399
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
NL G ++H IK G+ +++ VGN L+ YSKC +T + F RMHD+++ISWTT+I
Sbjct: 400 SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVI 459
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + +A+ LF+++ + +++ ++ A S+ + + IH ++ L
Sbjct: 460 AGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL 519
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + N L+ +Y + +M + +VF+ + ++++SW ++IS A NG AV+ F +
Sbjct: 520 -DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM 578
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ E+ +A + + AA +L G+ H ++++ G + + A++DMY G
Sbjct: 579 V-ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 637
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ VF+ + K +T++I+A HG ++ + F +M ++ V PD I+FL++L
Sbjct: 638 LQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 697
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ +GR M +Y +EP P+HY C+VDMLGR + EA E V + P
Sbjct: 698 CSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAE 757
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V +LL ACR H E+GE A L+++EP G+ VL+SN++AE+G W V +R MK
Sbjct: 758 VWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMK 817
Query: 588 SKGVRKEVGFSWADVGDIDG-LHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
+ G+ K G SW ++DG +H F++ D +HP S+EIY + +++ KRE A
Sbjct: 818 ASGMEKHPGCSWI---EMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREKGKRELA 873
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 291/582 (50%), Gaps = 22/582 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVT 59
MY K G D A +F+ + + +WNT++ + + + AL+ M + GV +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ L C G +LHSL+VK G S ++ NAL++MY++ L ARR+FD
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 120 NK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K D+V WN+ILS Y+ G +E + EM G + + SA +AC +LG
Sbjct: 245 EKGDAVLWNSILSSYSTSGK-SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303
Query: 179 KQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
K+IH +K + + + V N L++ Y++C A ++ R+M++ +V++W ++I
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ ++A+ F +M G ++V+ +I A + NL+ G +H IK + S
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLA-GMELHAYVIKHGWDSNLQ 422
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI MY++ + F + +++ISW +I+GYAQN + A++ F V K+
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + GS+L A + + + + H HI++ GL D ++ + L+D+YGK ++
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIV--KEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGY 539
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ RVF + K +WT++IS+ A +G+ + F+ M G+ DS+ L +L+
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 471 NGMIHKGRHLFDSML-KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
++KGR + +L K + +E S +VDM G L+ A+ + +I GL
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIE-RKGLLQY 656
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
S++ A +HG + + D M+ E ++ LYA
Sbjct: 657 TSMINAYGMHGCGKAAVELFDK-MRHENVSPDHISFLALLYA 697
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 254/518 (49%), Gaps = 45/518 (8%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVK----FGLDSEVYVGNALITMYSRWGRLVEARRV 114
++ L C G QLHS I K F LD ++ L+ MY + G L +A +V
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD---FLAGKLVFMYGKCGSLDDAEKV 138
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEK 173
FDEMP++ + +WN ++ Y +G+ + LAL MR +G+ L SF + AC +
Sbjct: 139 FDEMPDRTAFAWNTMIGAYVSNGEPA--SALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMI 232
++ G ++H + +K+GY + + N L+S Y+K + A ++F ++ + + W +++
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN-F 286
S + + LF+EM + G PN T + + A + K G+ IH +K++
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
SE VCN LI MY R M +E++ +++ ++++WN+LI GY QN + A++ F
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+I K + + S++ A G + L G H+++IK G DS+ VG+ L+DMY K
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSN--LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 434
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
R F +K +WT +I+ A++ + + F+++ K + D + S+L
Sbjct: 435 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 494
Query: 466 TVCG--RNGMIHKGRH-------LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
++ +I K H L D+++++ +VD+ G+ + A +
Sbjct: 495 RASSVLKSMLIVKEIHCHILRKGLLDTVIQNE-----------LVDVYGKCRNMGYATRV 543
Query: 517 VGQIPGGPGLSVLQSLLGACRIHGN----VEMGERIAD 550
I G +S S++ + ++GN VE+ R+ +
Sbjct: 544 FESIKGKDVVS-WTSMISSSALNGNESEAVELFRRMVE 580
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV--GLDSDPIVGSALLDMYGKR 405
+ E+ F VL G +S G++ HS I K + D + G L+ MYGK
Sbjct: 73 VSENNSPVEAFAYVLELCGKRRAVS--QGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKC 129
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GS+ ++++VF+E +++ FAW +I A +G+ S + + M +GV +F ++L
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 466 TVCGRNGMIHKGRHLFDSMLK-DYH 489
C + I G L ++K YH
Sbjct: 190 KACAKLRDIRSGSELHSLLVKLGYH 214
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 190/526 (36%), Positives = 298/526 (56%), Gaps = 12/526 (2%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ VSW A++SG +Q+ + EAI M G +F+SA AC ++E+
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFS-EAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEM 59
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR- 236
GKQ+H +++K G G+ + VG+ L YSKC DA KVF M ++ +SWT MI
Sbjct: 60 GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSK 119
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E+A+ FK+M + V + + A K GR +H +K F S+ V
Sbjct: 120 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 179
Query: 293 CNCLITMYARFESMQDSEKVFD-ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
N L MY++ M+ + VF + CR ++S+ LI GY + + F + ++
Sbjct: 180 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 239
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+PN +TF S++ A A +L+ G + H+ ++K+ D DP V S L+DMYGK G + +
Sbjct: 240 IEPNEFTFSSLIKA--CANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQ 297
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ + F+E + +E AW +++S +HG + + F+ M ++GV+P++ITF+S+LT C
Sbjct: 298 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 357
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G F SM K Y + P +HYSC++D+LGR GRL+EA+E + ++P P
Sbjct: 358 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 417
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
S LGACRIHG+ EMG+ A+ L+K+EP SG+ VL+SN+YA + WE V +R M+
Sbjct: 418 SFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGN 477
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V+K G+SW DVG H F + D +HPR IY + L ++K
Sbjct: 478 VKKLPGYSWVDVG--YKTHVFGAEDWSHPRKSAIYEKLDTLLDQIK 521
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 232/441 (52%), Gaps = 39/441 (8%)
Query: 24 DIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQL 79
++VSW ++SG + + S A+R M + G V +S+A+ C G Q+
Sbjct: 5 NLVSWTAMISGLSQ-NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 63
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H L +KFG+ SE++VG+ L MYS+ G + +A +VF+EMP KD VSW A++ GY++ G++
Sbjct: 64 HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEF 123
Query: 140 GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
EA+LA +M+ + + +D S ACG K + G+ +H +K+G+ + + VGN
Sbjct: 124 E-EALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 182
Query: 200 LMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMI-----SMNREDAVSLFKEMRLDGVCP 253
L YSK A+ VF + RNV+S+T +I + E +S+F E+R G+ P
Sbjct: 183 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 242
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
N+ TF LI A + +++G +H +K NF +P V + L+ MY + ++ + + F
Sbjct: 243 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAF 302
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
DE+ I+WN+L+S + Q+GL A++ F ++ KPNA TF S+L
Sbjct: 303 DEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCS------ 356
Query: 373 LKHGQRCHSHIIKVGLDS----DPIVG--------SALLDMYGKRGSIFESQRVFNETQ- 419
H+ +++ GLD D G S ++D+ G+ G + E++ N
Sbjct: 357 -------HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 409
Query: 420 EKSEFAWTAIISALARHGDYE 440
E + F W + + A HGD E
Sbjct: 410 EPNAFGWCSFLGACRIHGDKE 430
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 143/282 (50%), Gaps = 10/282 (3%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAV 58
+MY K G A +F + D VSW ++ G+ K ++AL +M V D
Sbjct: 84 DMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQH 143
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD-E 117
+ L C + FG +HS +VK G +S+++VGNAL MYS+ G + A VF +
Sbjct: 144 VLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGID 203
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
++ VS+ ++ GY + + + +E+ R+G+ + +F+S AC ++ LE
Sbjct: 204 SECRNVVSYTCLIDGYVETEQIE-KGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQ 262
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G Q+H +K+ + V ++L+ Y KC + A + F + D I+W +++S+ +
Sbjct: 263 GTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQ 322
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
DA+ +F+ M GV PN +TFI L+ S LV+EG
Sbjct: 323 HGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 364
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G ++A+ F+ + +P ++WN+++S F + DA+ RM GV +A
Sbjct: 286 VDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNA 345
Query: 58 VTYSTALSFCLDHEGFL-FGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T+ + L+ C H G + GL +S+ +G+ + +I + R GRL EA+
Sbjct: 346 ITFISLLTGC-SHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFI 404
Query: 116 DEMP-NKDSVSWNAILSGYTQDGD 138
+ MP ++ W + L GD
Sbjct: 405 NRMPFEPNAFGWCSFLGACRIHGD 428
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 209/651 (32%), Positives = 346/651 (53%), Gaps = 30/651 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIG-VVFD 56
+ M+ + G A +F ++ ++ SWN ++ G+ K D+A+ RM +G V D
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ L C G ++H +V++G + ++ V NALITMY + G + AR +FD
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255
Query: 117 EMPNKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDH--VSFTSAASACGHE 172
MP +D +SWNA++SGY ++G G+E A+ +GL +D ++ TS SAC
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAM-----RGLSVDPDLMTLTSVISACELL 310
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ LG+ IH I G+ +SV N L Y +A K+F RM ++++SWTTMI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 233 S-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S + A+ ++ M D V P+++T ++ A + + G +H L IK +
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S V N LI MY++ + + + +F + + +ISW ++I+G N A+ +
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 348 IKESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+PNA T + L A +GA L G+ H+H+++ G+ D + +ALLDMY +
Sbjct: 491 KMTLQPNAITLTAALAACARIGA-----LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVR 545
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + + FN +Q+K +W +++ + G V+ F M VRPD ITF+S+
Sbjct: 546 CGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISL 604
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L C ++ M+ +G F M +DY + P+ HY+C+VD+LGR G L+EA + + ++P P
Sbjct: 605 LCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTP 663
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+V +LL ACRIH +++GE A + +++ G Y+L+ NLYA+ G W VA +R+
Sbjct: 664 DPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRR 723
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
MK G+ + G SW +V +H F S D HP+++EI + E +M
Sbjct: 724 MMKENGLTVDAGCSWVEVK--GKVHAFLSDDKYHPQTKEINTVLEGFYEKM 772
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 234/485 (48%), Gaps = 14/485 (2%)
Query: 37 KSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGN 96
K ++A+ M + V D + + C G +++S+ + V +GN
Sbjct: 74 KLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGN 133
Query: 97 ALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR 156
A + M+ R+G LV+A VF +M ++ SWN ++ GY + G + L + G++
Sbjct: 134 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK 193
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
D +F CG +L GK++H ++ GY + V N L++ Y KC A +
Sbjct: 194 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 217 FRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F RM R++ISW MIS E + + LF MR V P+ +T +I A +
Sbjct: 254 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDR 313
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
+ GR IH I T F + SVCN L MY S +++EK+F + ++I+SW +ISGY
Sbjct: 314 RLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Query: 332 AQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
N L A+ + + ++S KP+ T +VL+A D L G H IK L S
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGD--LDTGVELHKLAIKARLIS 431
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
IV + L++MY K I ++ +F+ K+ +WT+II+ L + + ++M+
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK 491
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVG 508
++P++IT + L C R G + G+ + +L+ D + + ++DM R G
Sbjct: 492 -MTLQPNAITLTAALAACARIGALMCGKEIHAHVLR---TGVGLDDFLPNALLDMYVRCG 547
Query: 509 RLEEA 513
R+ A
Sbjct: 548 RMNTA 552
>gi|302769798|ref|XP_002968318.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
gi|300163962|gb|EFJ30572.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
Length = 666
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 199/620 (32%), Positives = 339/620 (54%), Gaps = 52/620 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVV-FD 56
+NMY K G A +F+ +++ D++SWN V++ + ++ +A+ M G + D
Sbjct: 48 VNMYGKCGSLALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPD 107
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVF 115
+VT+ +S C D G ++ +L+ + G LDS+V +GNAL+ MYS+ G L A VF
Sbjct: 108 SVTFVAVVSACCDPSALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVF 167
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-------LDHVSFTSAASA 168
+ M +D VSWNAI+S + + A+ EM +GL D + SA +A
Sbjct: 168 ERMKIRDVVSWNAIISALARHDRKDI-AMQRFREMQLEGLSPKEEALLPDGFTLASALAA 226
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C + LE G++IH + I+ G + + VGN L+S Y+ C DA + F++M RNV+SW
Sbjct: 227 CTGPEMLEEGREIHALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSW 286
Query: 229 TTMISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
MI+ ++A +F +M+L+GV PN VTF+ + A S ++G +H + +
Sbjct: 287 NAMIAAYVHHNCDKEAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRE 346
Query: 284 TNFLSEPSVCNCLITMYARFESMQD-------------------------------SEKV 312
+ ++ SV N ++ M+A+ S+ D + K+
Sbjct: 347 SGLEADASVGNAVVHMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKL 406
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDI 371
F+ + R++I+WN ++ Y + ++ AV+ F +I E +K N+ T+ ++L A A +
Sbjct: 407 FEVMEERDVITWNMILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLGA--CAGEA 464
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
L G+R H I + G DS+ VG+AL+DM+GK S+ +++ F + K +W +++
Sbjct: 465 LLAEGRRIHELIGERGADSELFVGNALVDMFGKCASLGGARQAFERIRGKDASSWNVLVA 524
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
ALA++GD E + QF +M+ +G++P +TF+ V C G + + + +F S+ DY I
Sbjct: 525 ALAQNGDAEEALKQFLQMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIA 584
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
P P HYS M D+LGR G L+EAEE++ +IP +LL AC++HG+VE G ++A
Sbjct: 585 PLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFSQDELPWMTLLSACKVHGDVERGRKVAGQ 644
Query: 552 LMKMEPAGSGSYVLMSNLYA 571
+++ P S + V +SN++A
Sbjct: 645 VLRWNPGDSAARVALSNIFA 664
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 154/539 (28%), Positives = 273/539 (50%), Gaps = 53/539 (9%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
G++ D V++ TAL C+ + G +H L+++ GL +++ VGNAL+ MY + G L A
Sbjct: 1 GLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALA 60
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL--DHVSFTSAASAC 169
R VFD M ++D +SWNA+++ Y Q G + + L + M++ R+ D V+F + SAC
Sbjct: 61 REVFDGMDHRDVISWNAVITAYAQAGH--CKEAMELFQAMQEDGRIEPDSVTFVAVVSAC 118
Query: 170 GHEKNLELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
LE G +I + + G + V +GN L++ YSKC A VF RM R+V+SW
Sbjct: 119 CDPSALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSW 178
Query: 229 TTMISM----NRED-AVSLFKEMRLDGVCPND-------VTFIGLIHAISIGNLVKEGRM 276
+IS +R+D A+ F+EM+L+G+ P + T + A + +++EGR
Sbjct: 179 NAIISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGRE 238
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
IH L I+ SE V N L++MYA ++QD+ + F +++ R ++SWNA+I+ Y +
Sbjct: 239 IHALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNC 298
Query: 337 SLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A + F + E +PN+ TF + L+A + + + G + HS + + GL++D VG
Sbjct: 299 DKEAFRIFHQMQLEGVQPNSVTFVTFLSA--CSTPAAFEDGLQLHSIVRESGLEADASVG 356
Query: 396 SALLDMYGK-------------------------------RGSIFESQRVFNETQEKSEF 424
+A++ M+ K G + E++++F +E+
Sbjct: 357 NAVVHMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVI 416
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W I+ A + + F+ M +G + +SIT+ ++L C ++ +GR + + +
Sbjct: 417 TWNMILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHE-L 475
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
+ + + + +VDM G+ L A + +I G S L+ A +G+ E
Sbjct: 476 IGERGADSELFVGNALVDMFGKCASLGGARQAFERIRGKDA-SSWNVLVAALAQNGDAE 533
>gi|302801269|ref|XP_002982391.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
gi|300149983|gb|EFJ16636.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
Length = 779
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 187/582 (32%), Positives = 325/582 (55%), Gaps = 15/582 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MYCK+G D+A + + D++SWN ++SG+ +S D L RM G+
Sbjct: 199 VDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTK 258
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY+T L+ C E G +H +V GLD + V + L+ MY + G L + +R E
Sbjct: 259 VTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCE 318
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +++++WN I+ Y + D+ +A+ + +M +G++ D V+F C +L
Sbjct: 319 VHERNTIAWNTIIGAYARYSDH-FQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLAQ 377
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G +H ++G+ + + V N L + Y+KC A K+F M RN +SW +++S +
Sbjct: 378 GILLHDWISQLGFES-IIVHNSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQ 436
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
DA F+ M+L+G P++VT I ++ A + KEG IH + +++ F V
Sbjct: 437 HGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGV 496
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N LI MYA+ + + VFD ++ R +SWN +++ Y + GL+ AV+ F+ + +
Sbjct: 497 ANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM--DVA 554
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS--DPIVGSALLDMYGKRGSIFE 410
+ T+ + L+A L HG+ H +++ G + D + +AL++MYGK GS+ E
Sbjct: 555 RDKVTYVAALDACSGLAG-GLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQE 613
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++++F+ + WT++I A A+H + E + K ME +GV+ D + FLS+L+ C
Sbjct: 614 ARKIFDGMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQEGVKVDDVVFLSILSGCDH 673
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G++ +G F SM+ DY I P +HY+C++D+LGR G L+ AE+LV ++P V
Sbjct: 674 SGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWM 733
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAE 572
+LL ACR+HGN E G+R A + ++P+ +YV++SN+Y +
Sbjct: 734 TLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIYTQ 775
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/448 (31%), Positives = 238/448 (53%), Gaps = 18/448 (4%)
Query: 101 MYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
MY + G L A VF ++ +W+A+L Y + V+A+ M +G+R D V
Sbjct: 1 MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSV 60
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+F + AC E L G+++H ++G T + N L++ Y KC DA ++F RM
Sbjct: 61 TFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRM 120
Query: 221 HDRNVISWTTMIS-------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE 273
NV+SWT++I + RE +V LF++M L+G+ PN +T + ++ A ++ +
Sbjct: 121 ESPNVVSWTSVIGNFAQYGHLGRE-SVLLFRKMELEGIRPNLITMVAVLRACNL----TD 175
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
GR +HG ++ + S+ N L+ MY + + +++ V E+ R++ISWN +ISGYAQ
Sbjct: 176 GRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQ 235
Query: 334 NGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
+G ++ + + ++ P T+ ++LNA + ED L G+ H ++ +GLD D
Sbjct: 236 SGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEED--LGEGKSIHRSVVDMGLDRDE 293
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
+V S LL MYGK GS+ + +R E E++ AW II A AR+ D+ + F++M+ +
Sbjct: 294 VVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLE 353
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
GV+ D++TF+ +L C + +G L D + E H S + M + G L+
Sbjct: 354 GVKADAVTFVLMLGTCSSPAHLAQGILLHD-WISQLGFESIIVHNS-LTAMYAKCGSLDA 411
Query: 513 AEELVGQIPGGPGLSVLQSLLGACRIHG 540
A ++ ++P +S SL+ A HG
Sbjct: 412 ARKMFEEMPSRNSVS-WNSLMSAAIQHG 438
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 267/530 (50%), Gaps = 27/530 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----SDDALSFALRMNLIGVVFD 56
+NMY K + A +F+ + +P++VSW +V+ F + +++ +M L G+ +
Sbjct: 101 INMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPN 160
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T L C G Q+H +++ G+ + +GNAL+ MY + G + EA V
Sbjct: 161 LITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLR 216
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
EMP +D +SWN ++SGY Q GD E + L M + GL V++ + +AC E++L
Sbjct: 217 EMPKRDVISWNIMISGYAQSGDCK-EGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLG 275
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
GK IH + MG V + L+ Y KC D + +H+RN I+W T+I
Sbjct: 276 EGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYA 335
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ A+ F++M+L+GV + VTF+ ++ S + +G ++H + F S
Sbjct: 336 RYSDHFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFES-II 394
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-- 349
V N L MYA+ S+ + K+F+E+ R +SWN+L+S Q+G A FF +K
Sbjct: 395 VHNSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQHGCH-ADAHKFFQRMKLE 453
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
S+P+ T S+L+A + + K G H +++ G D V +AL+ MY K G
Sbjct: 454 GSRPDEVTCISMLDA--CTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHE 511
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC- 468
++ VF+ E++ +W I++A G + F +M+ V D +T+++ L C
Sbjct: 512 AARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMD---VARDKVTYVAALDACS 568
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEEL 516
G G + G+ + ML D+ D + +V+M G+ G L+EA ++
Sbjct: 569 GLAGGLAHGKLIHGYML-DHGFSNRLDTVAATALVNMYGKCGSLQEARKI 617
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/485 (29%), Positives = 248/485 (51%), Gaps = 17/485 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD----ALSFALRMNLIGVVFDAV 58
MY K G D A +F L+ + +W+ +L + S++ AL RM L GV D+V
Sbjct: 1 MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSV 60
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ T L C G ++H+ I + GL++++Y NALI MY + +A ++F M
Sbjct: 61 TFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRM 120
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+ + VSW +++ + Q G G E++L +M +G+R + ++ + AC NL G
Sbjct: 121 ESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLTDG 176
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----S 233
+Q+HG ++ G S+GN L+ Y K +A+ V R M R+VISW MI S
Sbjct: 177 RQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQS 236
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ ++ + M+ DG+ P VT+ L++A S + EG+ IH + + V
Sbjct: 237 GDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVK 296
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
+ L+ MY + S++D ++ E+ R I+WN +I YA+ A+++F + E K
Sbjct: 297 SFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVK 356
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
+A TF VL + L G H I ++G +S IV ++L MY K GS+ ++
Sbjct: 357 ADAVTF--VLMLGTCSSPAHLAQGILLHDWISQLGFES-IIVHNSLTAMYAKCGSLDAAR 413
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
++F E ++ +W +++SA +HG + F+ M+ +G RPD +T +S+L C +
Sbjct: 414 KMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQA 473
Query: 473 MIHKG 477
+G
Sbjct: 474 NAKEG 478
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 203/570 (35%), Positives = 316/570 (55%), Gaps = 16/570 (2%)
Query: 78 QLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
QLH+ ++ GL V+ +L+ Y R+GR+ EA RVFDEMP +D +WNA+LSG ++
Sbjct: 87 QLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRN 146
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
+A+ L M+ +G+ D V+ +S C + L +H ++K G + V
Sbjct: 147 -TRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFV 205
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGV 251
N L+ Y K + +A+ VF M R++++W ++IS N + AV LF M GV
Sbjct: 206 CNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGV 265
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF-LSEPSVCNCLITMYARFESMQDSE 310
CP+ +T + L A++ + +H + + + + N ++ MYA+ + ++
Sbjct: 266 CPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQ 325
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAA 368
KVFD L R+++SWN LI+GY QNGL+ A++ + + KP TF SVL A
Sbjct: 326 KVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYL 385
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
L+ G R H+ IK GL+ D V + L+D+Y K G + E+ +F +S W A
Sbjct: 386 G--GLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNA 443
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
II+ L HG ++ F +M+ + ++PD +TF+S+L C G++ +GR FD M Y
Sbjct: 444 IIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVY 503
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
I P HY+CMVDMLGR G+L+EA E + +P P +V +LLGACRIHGNVEMG+
Sbjct: 504 GIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVA 563
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL 608
+ L +++P G YVLMSN+YA+ G W+ V +R ++ + ++K G+S +V +
Sbjct: 564 SQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVK--GSV 621
Query: 609 HGFSSGDNT--HPRSEEIYRMAECLGSEMK 636
F SG T HP+ EEI R L ++MK
Sbjct: 622 SVFYSGTQTEPHPQHEEIQRGLHDLLAKMK 651
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 226/458 (49%), Gaps = 26/458 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++ Y + G+ +A +F+ + D+ +WN +LSG ++ DA++ RM GV DA
Sbjct: 109 VHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDA 168
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT S+ L C+ L +H VK GL E++V NALI +Y + G L EA VF
Sbjct: 169 VTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGG 228
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIE-MMRKGLRLDHVSFTSAASA---CGHEK 173
M +D V+WN+I+S Q G V A + L MM G+ D ++ S ASA CG E
Sbjct: 229 MALRDLVTWNSIISANEQGGK--VAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDEL 286
Query: 174 NLELGKQIHGVSIKMGYGT-HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
K +H + G+ + GN ++ Y+K A KVF + DR+V+SW T+I
Sbjct: 287 G---AKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLI 343
Query: 233 SMNRE-----DAVSLFKEMR-LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+ + +A+ ++ +M +G+ P TF+ ++ A S +++G +H L IKT
Sbjct: 344 TGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGL 403
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ V CLI +YA+ + ++ +F+ + R WNA+I+G +G A+ F
Sbjct: 404 NLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQ 463
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYG 403
+ +E KP+ TF S+L A A L R +++ PI + ++DM G
Sbjct: 464 MQQEEIKPDHVTFVSLLAACSHA---GLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLG 520
Query: 404 KRGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ G + E+ K + A W A++ A HG+ E
Sbjct: 521 RAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVE 558
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 203/660 (30%), Positives = 356/660 (53%), Gaps = 23/660 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMYCK G A +F+ ++ +IV++N+++SG+ + D + + +G+ D
Sbjct: 101 LNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDK 160
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + AL+ C G +H LI+ +GL S+V + N+LI MYS+ G++ AR +FD
Sbjct: 161 YTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDH 220
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKN-- 174
D VSWN++++GY Q+G Y E +L +++ M + GL + + SA AC N
Sbjct: 221 SDKLDGVSWNSLIAGYVQNGKY--EELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGC 278
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
G +H +IK+G V VG L+ Y+K DA ++F +M D+NV+ + M++
Sbjct: 279 KMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAG 338
Query: 234 -MNRE--------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
+ +E A++LF EM+ G+ P+ T+ L+ A I K + +H L K
Sbjct: 339 LLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKN 398
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
LS+ + + LI +Y+ SM D+ F+ + I+ A+I GY QNG +A+ F
Sbjct: 399 GLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLF 458
Query: 345 FGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ ++ E KP+ + +++++ A L+ G++ H KVG+ I ++ + MY
Sbjct: 459 YELLTYEEKPDEFIXSTIMSS--CANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYA 516
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G ++ + F + + +W+ +I + A+HG + F+ M++ G+ P+ FL
Sbjct: 517 KSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLG 576
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL C G++ +G FD+M KDY ++ H C+VD+LGR GRL +AE L+ ++
Sbjct: 577 VLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFE 636
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
+ ++LL ACRIH + +R+A ++++EP S SYVL+ N+Y + G+ + +R
Sbjct: 637 HEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVR 696
Query: 584 KGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
M+ + ++KE G SW +G D ++ F SGD +H S +IY + + + K L+S ++
Sbjct: 697 TLMEERRIKKEPGLSWIQIG--DKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKD 754
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 213/419 (50%), Gaps = 18/419 (4%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G +HS ++K +++ N L+ MY + G A ++FD+M + V++N+++SGY Q
Sbjct: 78 GKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQ 137
Query: 136 DGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
+ ++ ++ L + R+ GL+LD + A +AC NL GK IHG+ + G G+ V
Sbjct: 138 MSN--LDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQV 195
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLD 249
+ N L+ YSKC A +F + +SW ++I+ E+ +++ ++M +
Sbjct: 196 VLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQN 255
Query: 250 GVCPNDVTFIGLIHAIS--IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
G+ N T + A S G M+H IK + V L+ MYA+ S+
Sbjct: 256 GLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLD 315
Query: 308 DSEKVFDELSCREIISWNALISGYAQ-----NGLSLAAVQAFFGVIKES-KPNAYTFGSV 361
D+ ++FD++ + ++ +NA+++G Q + + A+ FF + KP+ +T+ S+
Sbjct: 316 DAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSL 375
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L A ED K ++ H+ + K GL SD +GS L+D+Y GS+ ++ FN
Sbjct: 376 LKACIIVED--FKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNL 433
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+ TA+I ++G++ES ++ F E+ +PD ++++ C GM+ G +
Sbjct: 434 TIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQI 492
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 167/327 (51%), Gaps = 22/327 (6%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
+D+V +A+ G L GK +H IK + + + N L++ Y KC T A+K+
Sbjct: 60 VDYVKLVQSATKTG---KLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKL 116
Query: 217 FRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F +M N++++ ++IS N + + LF + R G+ + T G + A S +
Sbjct: 117 FDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNL 176
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
G+MIHGL + S+ + N LI MY++ + + +FD + +SWN+LI+GY
Sbjct: 177 SAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGY 236
Query: 332 AQNGLSLAAVQAFFGVIKESKP-----NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
QNG + ++++ N YT GS L A + + G H H IK+
Sbjct: 237 VQNG----KYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKL 292
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE-----S 441
GL D +VG+ALLDMY K GS+ ++ ++F++ +K+ + A+++ L + E
Sbjct: 293 GLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYK 352
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVC 468
+N F EM++ G++P T+ S+L C
Sbjct: 353 ALNLFFEMKSCGIKPSMFTYSSLLKAC 379
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 140/272 (51%), Gaps = 14/272 (5%)
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
V ++ L+ + + + G+++H IKT+F + N L+ MY + + ++K+FD+
Sbjct: 60 VDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDK 119
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGAAEDISL 373
+S I+++N+LISGY Q +L V F + K + YT L A + ++S
Sbjct: 120 MSKSNIVTYNSLISGYVQMS-NLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSA 178
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
G+ H I+ GL S ++ ++L+DMY K G + ++ +F+ + + +W ++I+
Sbjct: 179 --GKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGY 236
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
++G YE ++ ++M G+ ++ T S L C N G +F +ML D+ I+
Sbjct: 237 VQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSN---FNGCKMFGTMLHDHAIKLG 293
Query: 494 PDHY-----SCMVDMLGRVGRLEEAEELVGQI 520
H + ++DM + G L++A ++ Q+
Sbjct: 294 L-HLDVVVGTALLDMYAKTGSLDDAIQIFDQM 324
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L HG+ HSH+IK + + LL+MY K G + ++F++ + + + ++IS
Sbjct: 75 LNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISG 134
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
+ + + VM F + G++ D T LT C ++G + G+ + ++ Y +
Sbjct: 135 YVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGK-MIHGLILVYGLGS 193
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG--ERIAD 550
+ ++DM + G+++ A L G+S SL I G V+ G E +
Sbjct: 194 QVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVS-WNSL-----IAGYVQNGKYEELLT 247
Query: 551 ALMKMEPAGSG--SYVLMSNLYA 571
L KM G +Y L S L A
Sbjct: 248 ILQKMHQNGLAFNTYTLGSALKA 270
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 204/658 (31%), Positives = 353/658 (53%), Gaps = 24/658 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY + G +A +F+ + D+VSWN+++SG+ ++AL + +V D+
Sbjct: 148 VDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDS 207
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ L + G LH +K G++S V N L+ MY ++ R +ARRVFDE
Sbjct: 208 FTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDE 267
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL---RLDHVSFTSAASACGHEKN 174
M +DSV++N ++ GY + +E + ++M + L + D ++ TS ACGH ++
Sbjct: 268 MVVRDSVTYNTMICGYLK-----LEMVEESVKMFLENLDQFKPDILTVTSVLCACGHLRD 322
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L L K I+ ++ G+ +V N+L+ Y+KC A VF M ++ +SW ++IS
Sbjct: 323 LSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISG 382
Query: 235 NRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ +A+ LFK M + + +T++ LI + +K G+ +H IK+ +
Sbjct: 383 YIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYID 442
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N LI MYA+ + DS K+F+ + + ++WN +IS + G +Q + K
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRK 502
Query: 350 ESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
P+ TF L + L G+ H +++ G +S+ +G+AL++MY K G +
Sbjct: 503 NKVVPDMATFLVTLPMCASLAAKRL--GKEIHCCLLRFGYESELQIGNALIEMYSKCGCL 560
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S RVF + WT +I A +G+ E + F +ME G+ PDS+ F++++ C
Sbjct: 561 ESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYAC 620
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G++ KG F+ M Y I+P +HY+C+VD+L R ++ +AEE + +P P S+
Sbjct: 621 SHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASI 680
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
S+L ACR G++E ER++ ++++ P G +L SN YA W+ V+++RK ++
Sbjct: 681 WASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRD 740
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK---YLNSKRE 643
K ++K G+SW ++G +H F SGD++ P+SE I++ E L S M Y+ RE
Sbjct: 741 KHIKKNPGYSWIEIG--KKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSRE 796
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/571 (28%), Positives = 287/571 (50%), Gaps = 21/571 (3%)
Query: 13 ALCIFNNLNNP-DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCL 68
+L +F ++ ++ WN+++ F K+ AL F ++ V D T+ + + C
Sbjct: 58 SLSVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACA 117
Query: 69 DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
G ++ I++ G +S++YVGNAL+ MYSR G L AR+VFDEMP +D VSWN+
Sbjct: 118 GLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNS 177
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
++SGY+ G Y EA+ E+ + D + +S A + ++ G+ +HG ++K
Sbjct: 178 LISGYSSHGYYE-EALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKS 236
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLF 243
G + V N L++ Y K DA +VF M R+ +++ TMI E++V +F
Sbjct: 237 GVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMF 296
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
E LD P+ +T ++ A + + I+ ++ F+ E +V N LI +YA+
Sbjct: 297 LE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKC 355
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-FGVIKESKPNAYTFGSVL 362
M + VF+ + C++ +SWN++ISGY Q+G + A++ F +I E + + T+ ++
Sbjct: 356 GDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
+ D LK G+ HS+ IK G+ D V +AL+DMY K G + +S ++FN
Sbjct: 416 SLSTRLAD--LKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLD 473
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
W +ISA R GD+ + + +M V PD TFL L +C G+ +
Sbjct: 474 TVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHC 533
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
+L+ + E + +++M + G LE + + ++ + + G +G
Sbjct: 534 CLLR-FGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRD----VVTWTGMIYAYGMY 588
Query: 543 EMGERIADALMKMEPAG--SGSYVLMSNLYA 571
GE+ ++ + ME +G S V ++ +YA
Sbjct: 589 GEGEKALESFVDMEKSGIVPDSVVFIALIYA 619
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 247/484 (51%), Gaps = 13/484 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM-PNKDSVSWNAILSGYTQD 136
++H+L++ GLD + LI YS + + VF + P K+ WN+I+ ++++
Sbjct: 25 RIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSKN 84
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G + +A+ ++ + D +F S AC + E+G ++ ++MG+ + + V
Sbjct: 85 GWFP-KALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYV 143
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGV 251
GN L+ YS+ + A +VF M R+++SW ++IS E+A+ ++ E+R +
Sbjct: 144 GNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWI 203
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ T ++ A + +VK+G+ +HG +K+ S V N L+ MY +F D+ +
Sbjct: 204 VPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARR 263
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDI 371
VFDE+ R+ +++N +I GY + + +V+ F + + KP+ T SVL A G D+
Sbjct: 264 VFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFKPDILTVTSVLCACGHLRDL 323
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SL + ++++++ G + V + L+D+Y K G + ++ VFN + K +W +IIS
Sbjct: 324 SL--AKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD-YHI 490
+ GD M FK M + D IT+L ++++ R + G+ L + +K +I
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYI 441
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIAD 550
+ S + ++DM + G + ++ ++ + G +++ AC G+ G ++
Sbjct: 442 DLSVSN--ALIDMYAKCGEVGDSLKIFNSM-GTLDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 551 ALMK 554
+ K
Sbjct: 499 QMRK 502
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 208/442 (47%), Gaps = 17/442 (3%)
Query: 159 HVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR 218
VS + A NL ++IH + I +G L+ YS + VFR
Sbjct: 4 RVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFR 63
Query: 219 RMHD-RNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
R+ +NV W ++I ++ A+ + ++R V P+ TF +I A + +
Sbjct: 64 RVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G +++ ++ F S+ V N L+ MY+R + + +VFDE+ R+++SWN+LISGY+
Sbjct: 124 MGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 333 QNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
+G A++ + + P+++T SVL A A + +K GQ H +K G++S
Sbjct: 184 SHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAF--ANLLVVKQGQGLHGFTLKSGVNSV 241
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+V + LL MY K +++RVF+E + + +I + E + F E +
Sbjct: 242 SVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLD 301
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
+ +PD +T SVL CG + +++++ ML+ + S + ++D+ + G +
Sbjct: 302 Q-FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVK-NILIDVYAKCGDMI 359
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM-EPAGSGSYVLMSNLY 570
A ++ + +S S++ G++ ++ +M M E A +Y+++ +L
Sbjct: 360 TARDVFNSMECKDTVS-WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLS 418
Query: 571 AEKGDWEMVAILRKGMKSKGVR 592
D + KG+ S G++
Sbjct: 419 TRLADLK----FGKGLHSNGIK 436
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 338/646 (52%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K + AL F+ + + VSW ++G E+ L ++M +G+
Sbjct: 178 VDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQ 237
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y++ C QLH+ +K ++ VG A++ +Y++ LV+ARR F
Sbjct: 238 PAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFS 297
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+PN + NA++ G + G G EA+ M R G+ D VS + SAC K
Sbjct: 298 LPNHTVQACNAMMVGLVRTG-LGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQ 356
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR- 236
G Q+H ++IK G+ V V N ++ Y KC+ +A VF+ M R+ +SW +I+
Sbjct: 357 GLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQ 416
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
ED ++ EM G+ P+D T+ ++ A + ++ G ++HG IK+ + V
Sbjct: 417 NECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFV 476
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-- 350
+ ++ MY + + +++K+ D + +E++SWN++ISG++ N S A Q FF + +
Sbjct: 477 SSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEA-QKFFSEMLDIG 535
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+ +T+ +VL+ I L G++ H IIK + D + S L+DMY K G++ +
Sbjct: 536 VKPDHFTYATVLDTCANLATIEL--GKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPD 593
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S +F + Q+ +W A+I A HG + F+ M+ V P+ TF++VL C
Sbjct: 594 SLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSH 653
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ G F M Y +EP +H++CMVD+LGR +EA + + +P + +
Sbjct: 654 VGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWK 713
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL C+I +VE+ E A +++++P S Y+L+SN+YAE G W V+ R+ M+
Sbjct: 714 TLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGR 773
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++KE G SW +V +HGF +GD HPRS E+Y M L EMK
Sbjct: 774 LKKEPGCSWIEVQ--SEMHGFLAGDKVHPRSREVYEMLNNLIVEMK 817
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 150/524 (28%), Positives = 261/524 (49%), Gaps = 17/524 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ Y +G A +F + +PD+VSWN +LSG+ + D++ ++ M GV D
Sbjct: 77 LTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDR 136
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C E G+Q+H++ VK GL+ +V G+AL+ MY + L +A R F
Sbjct: 137 TTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHG 196
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++SVSW A ++G Q+ Y + ++M R GL + ++ S +C L
Sbjct: 197 MGERNSVSWGAAIAGCVQNEQY-TRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLST 255
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT-MISMNR 236
+Q+H +IK + VG ++ Y+K + DA + F + + V + M+ + R
Sbjct: 256 ARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVR 315
Query: 237 E----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF+ M G+ + V+ G+ A + +G +H L IK+ F + V
Sbjct: 316 TGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCV 375
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N ++ +Y + +++ ++ VF E+ R+ +SWNA+I+ QN + +++
Sbjct: 376 RNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGM 435
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ +T+GSVL A + SL++G H IK GL D V S ++DMY K G I E+
Sbjct: 436 EPDDFTYGSVLKACAGLQ--SLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEA 493
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
Q++ + + +W +IIS + + E F EM + GV+PD T+ +VL C
Sbjct: 494 QKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANL 553
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEA 513
I G+ + ++K E D Y S +VDM + G + ++
Sbjct: 554 ATIELGKQIHGQIIKQ---EMLGDEYISSTLVDMYAKCGNMPDS 594
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 139/489 (28%), Positives = 227/489 (46%), Gaps = 51/489 (10%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN-------- 127
G H+ ++ G +V N L+ MY+R G AR VFD MP++D+VSWN
Sbjct: 23 GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAH 82
Query: 128 -----------------------AILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS 164
A+LSGY Q G + L+ +EM R+G+ D +
Sbjct: 83 AGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLS-VEMARRGVAPDRTTLAV 141
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
ACG ++L LG QIH V++K G V G+ L+ Y KC DA + F M +RN
Sbjct: 142 LLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERN 201
Query: 225 VISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
+SW I+ ++ + LF +M+ G+ + + + + + + R +H
Sbjct: 202 SVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHA 261
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
IK F ++ V ++ +YA+ +S+ D+ + F L + + NA++ G + GL
Sbjct: 262 HAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAE 321
Query: 340 AVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
A+Q F + + + + V +A AE G + H IK G D D V +A+
Sbjct: 322 ALQLFQFMTRSGIGFDVVSLSGVFSA--CAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAI 379
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
LD+YGK ++ E+ VF E +++ +W AII+AL ++ YE + EM G+ PD
Sbjct: 380 LDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDD 439
Query: 459 ITFLSVLTVCG-----RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
T+ SVL C G + G+ + + D + S +VDM + G + EA
Sbjct: 440 FTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVS------STVVDMYCKCGMITEA 493
Query: 514 EELVGQIPG 522
++L +I G
Sbjct: 494 QKLHDRIGG 502
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 47/336 (13%)
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L G+ H + G+ V N L+ Y++C A VF M R+ +SW TM++
Sbjct: 20 LATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTA 79
Query: 235 NR------------------------------------EDAVSLFKEMRLDGVCPNDVTF 258
D+V L EM GV P+ T
Sbjct: 80 YAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTL 139
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC 318
L+ A + G IH + +KT + + L+ MY + S++D+ + F +
Sbjct: 140 AVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGE 199
Query: 319 REIISWNALISGYAQN-----GLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISL 373
R +SW A I+G QN GL L G + S+P + SV + A L
Sbjct: 200 RNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLG-LGVSQP---AYASVFRSCAAI--TCL 253
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
++ H+H IK +D +VG+A++D+Y K S+ +++R F + A A++ L
Sbjct: 254 STARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGL 313
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
R G + F+ M G+ D ++ V + C
Sbjct: 314 VRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACA 349
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 69/188 (36%), Gaps = 32/188 (17%)
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
TF + A +L GQ H+ ++ G V + LL MY + G ++ VF+
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFK----------------------------- 447
+ +W +++A A GD + + F
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123
Query: 448 --EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLG 505
EM +GV PD T +L CG + G + +K +E S +VDM G
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKT-GLEMDVRAGSALVDMYG 182
Query: 506 RVGRLEEA 513
+ LE+A
Sbjct: 183 KCRSLEDA 190
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 195/571 (34%), Positives = 337/571 (59%), Gaps = 18/571 (3%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H L +K G + +Y N +I+ Y++ G + A ++F E +D+VSWN +++G+ G++
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 140 GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
A+ L M R G +D SF S +E+G+Q+H + +KMGY +V G+
Sbjct: 82 ET-ALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSA 140
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPN 254
L+ Y+KCE DA +VF+ ++ RN ++W +IS +R A L M L+GV +
Sbjct: 141 LLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEID 200
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
D TF L+ + +L K +H +K S+ +VCN +IT Y+ S++D+E+VFD
Sbjct: 201 DGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFD 260
Query: 315 -ELSCREI--ISWNALISGYAQNGLSLAAVQAFFGVIKESKP--NAYTFGSVLNAVGAAE 369
+ R++ +SWN++++G++Q+GLS A++ FF ++ + Y F +VL + ++
Sbjct: 261 GAIETRDLDHVSWNSILTGFSQSGLSEDALK-FFENMRSQYVVIDHYAFSAVLRS--CSD 317
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+L+ GQ+ H ++K G + + V S+L+ MY K G I ++++ F+ T + S AW ++
Sbjct: 318 LATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSL 377
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I A+HG + ++ F M+++ V+ D ITF++VLT C G++ +G SM DY
Sbjct: 378 IFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYG 437
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I P +HY+CM+D+LGR GRL+EA+ L+ +P P V ++LLGACR G++E+ ++A
Sbjct: 438 IPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVA 497
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
L+++EP +YVL+S+++ W A +++ MK +GV+K G+SW +V + +
Sbjct: 498 SHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVK--NEVR 555
Query: 610 GFSSGDNTHPRSEEIY-RMAECLGSEMKYLN 639
F++ D +HP EEIY R+ E L E++ L+
Sbjct: 556 SFNAEDRSHPNCEEIYLRLGE-LMEEIRRLD 585
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 226/469 (48%), Gaps = 30/469 (6%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTY 60
Y K G+ A +F + D VSWNT+++GF + AL F M G D ++
Sbjct: 44 YAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSF 103
Query: 61 STALS--FCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ L C+ G++ G Q+HS++VK G + V+ G+AL+ MY++ R+ +A VF
Sbjct: 104 GSILKGVACV---GYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKS 160
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++SV+WNA++SGY Q GD G A L M +G+ +D +F + +L
Sbjct: 161 INIRNSVTWNALISGYAQVGDRGT-AFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKL 219
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR---RMHDRNVISWTTMI-- 232
Q+H +K G + +V N +++ YS+C DA +VF D + +SW +++
Sbjct: 220 TTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTG 279
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
S EDA+ F+ MR V + F ++ + S ++ G+ +H L +K+ F
Sbjct: 280 FSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPN 339
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI- 348
V + LI MY++ ++D+ K FD I+WN+LI GYAQ+G A+ FF +
Sbjct: 340 GFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKD 399
Query: 349 KESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ K + TF +VL A +G E+ S G+ + ++D+ G+
Sbjct: 400 RRVKLDHITFVAVLTACSHIGLVEE----GWSFLKSMESDYGIPPRMEHYACMIDLLGRA 455
Query: 406 GSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE---SVMNQFKEME 450
G + E++ + E W ++ A GD E V + E+E
Sbjct: 456 GRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELE 504
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 155/286 (54%), Gaps = 14/286 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK-SDDALSFALR--MNLIGVVFDA 57
++MY K + + A +F ++N + V+WN ++SG+ + D +F L M L GV D
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD- 116
T++ L+ D + Q+H+ IVK GL S+ V NA+IT YS G + +A RVFD
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261
Query: 117 --EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEK 173
E + D VSWN+IL+G++Q G E L E MR + + +DH +F++ +C
Sbjct: 262 AIETRDLDHVSWNSILTGFSQSG--LSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLA 319
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L+LG+Q+H + +K G+ + V + L+ YSKC V DA K F + I+W ++I
Sbjct: 320 TLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIF 379
Query: 234 MNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+ A+ LF M+ V + +TF+ ++ A S LV+EG
Sbjct: 380 GYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEG 425
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 210/641 (32%), Positives = 355/641 (55%), Gaps = 15/641 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+N Y G + A +F+ + + VS+ T+ GF +S A LR+ G +
Sbjct: 45 LNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQ 104
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++T L + + L +H+ + K G ++ +VG ALI YS G + AR+VFD
Sbjct: 105 FVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDG 164
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD VSW +++ Y ++ + +++L +M G R ++ + ++A +C + ++
Sbjct: 165 IYFKDMVSWTGMVACYAENYCHE-DSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKV 223
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK +HG ++K+ Y + VG L+ Y+K +A + F M ++I W+ MIS
Sbjct: 224 GKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQ 283
Query: 235 --NREDAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++A+ LF MR V PN+ TF ++ A + L+ G IH +K S
Sbjct: 284 SDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVF 343
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
V N L+ +YA+ +++S K+F + + ++WN +I GY Q G A+ F ++ +
Sbjct: 344 VSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLD 403
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P T+ SVL A +A ++L+ G++ HS IK + D +V ++L+DMY K G I +
Sbjct: 404 IQPTEVTYSSVLRA--SASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDD 461
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ F++ ++ E +W A+I + HG +N F M+ +P+ +TF+ VL+ C
Sbjct: 462 ARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSN 521
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ KGR F SML+DY IEP +HY+CMV +LGR G+ +EA +L+G+IP P + V +
Sbjct: 522 AGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWR 581
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGAC IH N+++G+ A +++MEP ++VL+SN+YA W+ VA +RK MK K
Sbjct: 582 ALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKK 641
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
V+KE G SW + + +H F+ GD +HP + I+ M E L
Sbjct: 642 VKKEPGLSWVENQGV--VHYFTVGDTSHPNIKLIFAMLEWL 680
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 236/465 (50%), Gaps = 11/465 (2%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D+ +Y+ L + + G LH I+K G +++ N L+ Y +G L +A ++F
Sbjct: 2 DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
DEMP ++VS+ + G+++ + L+ + R+G ++ FT+
Sbjct: 62 DEMPLTNTVSFVTLAQGFSRSHQFQRARR-LLLRLFREGYEVNQFVFTTLLKLLVSMDLA 120
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+ +H K+G+ VG L+ YS C A +VF ++ ++++SWT M++
Sbjct: 121 DTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY 180
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
ED++ LF +MR+ G PN+ T + + + K G+ +HG +K + +
Sbjct: 181 AENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDL 240
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V L+ +Y + + ++++ F+E+ ++I W+ +IS YAQ+ S A++ F + +
Sbjct: 241 YVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQS 300
Query: 351 S--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S PN +TF SVL A A + L G + HS ++KVGLDS+ V +AL+D+Y K G I
Sbjct: 301 SVVVPNNFTFASVLQA--CASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEI 358
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S ++F + EK+E AW II + GD E +N F M ++P +T+ SVL
Sbjct: 359 ENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRAS 418
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ GR + +K + + S S ++DM + GR+++A
Sbjct: 419 ASLVALEPGRQIHSLTIKTMYNKDSVVANS-LIDMYAKCGRIDDA 462
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 167/370 (45%), Gaps = 16/370 (4%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
+D S+ + ++ GK +H +K G + N+L++TY DA+K+
Sbjct: 1 MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60
Query: 217 FRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F M N +S+ T+ S + A L + +G N F L+ + +L
Sbjct: 61 FDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLA 120
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
+H K ++ V LI Y+ ++ + +VFD + ++++SW +++ Y
Sbjct: 121 DTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY 180
Query: 332 AQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
A+N ++ F + I +PN +T + L + E + K G+ H +KV D
Sbjct: 181 AENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLE--AFKVGKSVHGCALKVCYDR 238
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D VG ALL++Y K G I E+Q+ F E + W+ +IS A+ + + F M
Sbjct: 239 DLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMR 298
Query: 451 NKG-VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK---DYHIEPSPDHYSCMVDMLGR 506
V P++ TF SVL C +++ G + +LK D ++ S + ++D+ +
Sbjct: 299 QSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVS----NALMDVYAK 354
Query: 507 VGRLEEAEEL 516
G +E + +L
Sbjct: 355 CGEIENSVKL 364
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 213/694 (30%), Positives = 361/694 (52%), Gaps = 80/694 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL----SFALRMNLIGVVFD 56
+N Y K G+ A+ +F + D+ SWNT++SG+ +S L SF +
Sbjct: 78 LNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPN 137
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF- 115
A T++ A+ C LQL ++ KFG + V AL+ M+ R G + A R+F
Sbjct: 138 AFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFV 197
Query: 116 ------------------------------DEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
D MP +D VSWN ++S +Q G EA+
Sbjct: 198 RIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVR-EALD 256
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
+++M KG+RLD ++TS+ +AC +L GKQ+H I+ V + L+ Y+
Sbjct: 257 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYA 316
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIG 260
KC +A VF +HDRN ++WT +I+ + ++V LF +MR + + +
Sbjct: 317 KCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALAT 376
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
LI + GR +H LC+K+ + V N LI+MYA+ +++Q +E +F ++ ++
Sbjct: 377 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKD 436
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAV---GAAED------- 370
I+SW ++I+ ++Q G ++A + FF + S N T+ ++L A GA ED
Sbjct: 437 IVSWTSMITAHSQVG-NIAKAREFFDGM--STKNVITWNAMLGAYIQHGAEEDGLRMYNV 493
Query: 371 --------------ISL----------KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++L K G + +KVGL D V +A++ MY K G
Sbjct: 494 MLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCG 553
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I E+++VF+ K +W A+I+ ++HG + + F ++ +G +PD I++++VL+
Sbjct: 554 RILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G++ +G+ FD M + ++I P +H+SCMVD+LGR G L EA++L+ ++P P
Sbjct: 614 GCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTA 673
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +LL AC+IHGN E+ E A + +++ SGSY+LM+ +YA+ G + A +RK M
Sbjct: 674 EVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLM 733
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPR 620
+ KG++K G+SW +V + +H F + D +HP+
Sbjct: 734 RDKGIKKNPGYSWMEVN--NKVHVFKADDVSHPQ 765
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 213/466 (45%), Gaps = 45/466 (9%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
V N ++ Y + GRL +A +F MP +D SWN ++SGY Q Y + ++ + + M
Sbjct: 71 VITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQY-LASLESFVSMH 129
Query: 152 RKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
R G + +F A +CG L Q+ G+ K G V L+ + +C
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTV 189
Query: 211 GDANKVFRR-------------------------------MHDRNVISWTTMISMNRE-- 237
A+++F R M +R+V+SW M+S +
Sbjct: 190 DLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+ + +M+ GV + T+ + A + + ++ G+ +H I+ +P V +
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVAS 309
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP- 353
L+ +YA+ ++++ VF+ L R ++W LI+G+ Q+G +V+ F + E
Sbjct: 310 ALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTL 369
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ + ++++ + D+ L G++ HS +K G +V ++L+ MY K ++ ++
Sbjct: 370 DQFALATLISGCCSRMDLCL--GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAES 427
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F EK +WT++I+A ++ G+ F M K V IT+ ++L ++G
Sbjct: 428 IFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNV----ITWNAMLGAYIQHGA 483
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
G +++ ML + + P Y + +G + ++++G+
Sbjct: 484 EEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGR 529
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 205/648 (31%), Positives = 351/648 (54%), Gaps = 19/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY + D A +F+ + + + VSW V++ ++ DA+ M +G D
Sbjct: 87 ITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDE 146
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+A+ C + G Q+H+ +K + V NAL+TMYS+ G + + +F+
Sbjct: 147 FALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFER 206
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKN-L 175
+ +KD SW +I++G Q G ++A+ EM+ +G+ + F S AC N L
Sbjct: 207 IRDKDLFSWGSIIAGLAQQGR-EMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSL 265
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E G+QIHG+ +K + G L Y++C A KVF R+ +++SW ++I+
Sbjct: 266 EYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAF 325
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
D A+ LF EMR + P+ +T + L+ A + +++GR IH +K +
Sbjct: 326 SADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDV 385
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
VCN LI+MY R + VF E + R++++WN++++ Q+ + V F ++
Sbjct: 386 MVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHR-HMEDVFKLFRLLHS 444
Query: 351 SKP--NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S P + + +VL+A +AE + ++ H++ KVGL SD I+ +AL+D Y K GS+
Sbjct: 445 SMPSLDRISLNNVLSA--SAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSL 502
Query: 409 FESQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
++ ++F + F+W+++I A+ G + ++ F M N GV+P+ +TF+ VL
Sbjct: 503 DDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIA 562
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C R G++ +G + + M +Y I P+ +H SC++D+L R GRL EA + V Q+P P +
Sbjct: 563 CSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDII 622
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+ +LL A R H +VEMG+R A+ ++ ++P+ S +YVL+ N+YA G+W A L+K M+
Sbjct: 623 MWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMR 682
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
S GV+K G SW + L F D +HP S+E+Y M + +G EM
Sbjct: 683 SSGVQKSPGKSWIKLK--GELKVFIVEDRSHPESDEMYTMLDLIGFEM 728
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 224/433 (51%), Gaps = 16/433 (3%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+ N LITMY R AR VFD M +++ VSW A+++ + Q+ +A+ M+R
Sbjct: 82 LSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCA-DAMGLFSSMLRL 140
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G D + SA AC +L LG+Q+H +IK G H+ V N L++ YSK GD
Sbjct: 141 GTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDG 200
Query: 214 NKVFRRMHDRNVISWTTMIS----MNRE-DAVSLFKEMRLDGV-CPNDVTFIGLIHAISI 267
+F R+ D+++ SW ++I+ RE DA+ +F+EM +G+ PN+ F + A S+
Sbjct: 201 FALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSV 260
Query: 268 G-NLVKEGRMIHGLCIKTNFLSEPSVCNC-LITMYARFESMQDSEKVFDELSCREIISWN 325
N ++ G IHGLC+K L S C L MYAR + + KVF + +++SWN
Sbjct: 261 VINSLEYGEQIHGLCVKYK-LDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWN 319
Query: 326 ALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
+LI+ ++ +GL L+ F ++ S KP+ T ++L A + +L+ G+ HS++
Sbjct: 320 SLINAFSADGL-LSEAMVLFSEMRYSSLKPDGITVMALLCACVGCD--ALRQGRSIHSYL 376
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
+K+GL D +V ++L+ MY + + VF+ET ++ W +I++A +H E V
Sbjct: 377 VKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVF 436
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
F+ + + D I+ +VL+ G + + K + + ++D
Sbjct: 437 KLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFK-VGLVSDAILSNALIDT 495
Query: 504 LGRVGRLEEAEEL 516
+ G L++A +L
Sbjct: 496 YAKCGSLDDANKL 508
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 134/271 (49%), Gaps = 12/271 (4%)
Query: 273 EGRMIHGLCIKTN----FLSEPSV-CNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
+GR++H + ++ +L+ ++ N LITMY R + + VFD + R +SW A+
Sbjct: 58 QGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAV 117
Query: 328 ISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
I+ +AQN A+ F +++ + P+ + GS + A D+ L G++ H+ IK
Sbjct: 118 IAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGL--GRQVHAQAIKS 175
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
IV +AL+ MY K GS+ + +F ++K F+W +II+ LA+ G ++ F
Sbjct: 176 DNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIF 235
Query: 447 KEMENKGV-RPDSITFLSVLTVCGRN-GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDML 504
+EM +G+ P+ F SV C + G + +K Y ++ + + DM
Sbjct: 236 REMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVK-YKLDRNSYAGCSLGDMY 294
Query: 505 GRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
R +L+ A ++ +I P L SL+ A
Sbjct: 295 ARCNKLDSAMKVFYRIE-SPDLVSWNSLINA 324
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 372 SLKHGQRCHSHIIKVG-----LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
S G+ H H++ L + I+ + L+ MYG+ + ++ VF+ +++ +W
Sbjct: 55 SFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSW 114
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
A+I+A A++ M F M G PD S + C G + GR + +K
Sbjct: 115 AAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIK 174
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 212/645 (32%), Positives = 345/645 (53%), Gaps = 25/645 (3%)
Query: 3 MYCKSGQFDKALCIFNNL----NNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVF 55
+Y G D+A +F+ + VSWNT++S + K+D DA+ M G
Sbjct: 144 VYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERP 203
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ +S ++ C G Q+H +V+ G + +V+ NAL+ MYS+ G + A VF
Sbjct: 204 NEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVF 263
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
++MP D VSWNA +SG G + A+ L++M GL + + +S AC
Sbjct: 264 EKMPAADVVSWNAFISGCVTHG-HDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAF 322
Query: 176 ELGKQIHGVSIKM--GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
LG+QIHG +K + V+VG L+ Y+K DA KVF M R++I W +IS
Sbjct: 323 NLGRQIHGFMVKAVADFDEFVAVG--LVDMYAKHGFLDDARKVFDFMPRRDLILWNALIS 380
Query: 234 MNREDA-----VSLFKEMRLDGVC--PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
D +SLF MR +G+ N T ++ + + + R +H L K
Sbjct: 381 GCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGL 440
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
LS+ V N LI Y + + + KVF E +IIS +++ +Q A++ F
Sbjct: 441 LSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQ 500
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++++ +P+++ S+LNA + + + G++ H+H+IK SD G+AL+ Y K
Sbjct: 501 MLRKGLEPDSFVLSSLLNACTSLS--AYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKC 558
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GSI ++ F+ E+ +W+A+I LA+HG + ++ F M ++GV P+ IT SVL
Sbjct: 559 GSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVL 618
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ + F+SM + + I+ + +HY+CM+D+LGR G+LE+A ELV +P
Sbjct: 619 SACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQAN 678
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+V +LLGA R+H + E+G A+ L +EP SG++VL++N YA G W+ +A +RK
Sbjct: 679 AAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKL 738
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY-RMAE 629
MK V+KE SW ++ D +H F GD +HP + +IY ++AE
Sbjct: 739 MKDSNVKKEPAMSWVEIK--DKVHTFIVGDKSHPMTRDIYGKLAE 781
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 166/576 (28%), Positives = 279/576 (48%), Gaps = 30/576 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ +Y + A +F+ + +P VSW+++++ + + DAL M GV +
Sbjct: 44 LTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNE 103
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
L D FG Q+H+L V L +V+V NAL+ +Y +G + EARR+FDE
Sbjct: 104 FALPVVLKCAPD---VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDE 160
Query: 118 MP----NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
+++VSWN ++S Y ++ G +AI EM+ G R + F+ +AC +
Sbjct: 161 YVGVGGERNAVSWNTMISAYVKNDQSG-DAIGVFREMVWSGERPNEFGFSCVVNACTGSR 219
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+LE G+Q+HG ++ GY V N L+ YSK A VF +M +V+SW IS
Sbjct: 220 DLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFIS 279
Query: 234 -----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ A+ L +M+ G+ PN T ++ A + GR IHG +K
Sbjct: 280 GCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADF 339
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ V L+ MYA+ + D+ KVFD + R++I WNALISG + +G + F +
Sbjct: 340 DEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMR 399
Query: 349 KES---KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
KE N T SVL + ++E I H ++ H+ K+GL SD V + L+D Y K
Sbjct: 400 KEGLDLDVNRTTLASVLKSTASSEAIC--HTRQVHALAEKIGLLSDSHVINGLIDSYWKC 457
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + + +VF E++ + T +++AL++ E + F +M KG+ PDS S+L
Sbjct: 458 GQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLL 517
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS--CMVDMLGRVGRLEEAEELVGQIPGG 523
C +G+ + ++K + + D ++ +V + G +E+A+ +P
Sbjct: 518 NACTSLSAYEQGKQVHAHLIKR---QFTSDVFAGNALVYAYAKCGSIEDADMAFSGLP-E 573
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
G+ +++G HG+ G+R D +M G
Sbjct: 574 RGIVSWSAMIGGLAQHGH---GKRALDLFHRMLDEG 606
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 155/582 (26%), Positives = 266/582 (45%), Gaps = 60/582 (10%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T +AL+ G LHS ++K GL + N L+T+YSR AR VFDE+
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEI 63
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P+ VSW+++++ Y+ +G +A+LA M +G+ + + ++ G
Sbjct: 64 PDPCHVSWSSLVTAYSNNG-MPRDALLAFRAMRGRGVPCNEFALPVVLKCA---PDVRFG 119
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM----HDRNVISWTTMISM 234
Q+H +++ V V N L++ Y + +A ++F +RN +SW TMIS
Sbjct: 120 AQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISA 179
Query: 235 -----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
DA+ +F+EM G PN+ F +++A + ++ GR +HG ++T + +
Sbjct: 180 YVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKD 239
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
N L+ MY++ ++ + VF+++ +++SWNA ISG +G A++ +K
Sbjct: 240 VFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQ-MK 298
Query: 350 ESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
S PN +T SVL A A +L G++ H ++K D D V L+DMY K G
Sbjct: 299 SSGLVPNVFTLSSVLKACAGAGAFNL--GRQIHGFMVKAVADFDEFVAVGLVDMYAKHGF 356
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD--SITFLSVL 465
+ ++++VF+ + W A+IS + G + V++ F M +G+ D T SVL
Sbjct: 357 LDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVL 416
Query: 466 TVCGRNGMIHKGRH-------------------LFDSMLK----DYHIEPSPDHYS---- 498
+ I R L DS K DY I+ + S
Sbjct: 417 KSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDII 476
Query: 499 ---CMVDMLGRVGRLEEAEELVGQIPGG---PGLSVLQSLLGACRIHGNVEMGERIADAL 552
M+ L + E+A +L Q+ P VL SLL AC E G+++ L
Sbjct: 477 SSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHL 536
Query: 553 MKMEPAG---SGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
+K + +G+ ++ + YA+ G E + G+ +G+
Sbjct: 537 IKRQFTSDVFAGNALVYA--YAKCGSIEDADMAFSGLPERGI 576
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 209/667 (31%), Positives = 348/667 (52%), Gaps = 38/667 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K +F ++L +F + + VSW+ +++G +++ AL F M +
Sbjct: 180 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 239
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y++ L C G QLH+ +K ++ V A + MY++ + +A+ +FD+
Sbjct: 240 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDK 299
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
N + S+NA+++GY+Q+ ++G +A+L +M GL D +S + AC K L
Sbjct: 300 SENLNRQSYNAMITGYSQE-EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 358
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G QI+ ++IK V V N + Y KC+ +A +VF M R+ +SW +I+ + +
Sbjct: 359 GLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 418
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + LF M + P++ TF ++ A + G+L G IH +K+ S SV
Sbjct: 419 NGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTGGSL-GYGMEIHSSIVKSGMASNSSV 477
Query: 293 CNCLITMYARFESMQDSEKVFDELSCRE--------------------IISWNALISGYA 332
LI MY++ ++++EK+ R +SWN++ISGY
Sbjct: 478 GCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 537
Query: 333 QNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
S A Q F + E P+ +T+ +VL+ L G++ H+ +IK L S
Sbjct: 538 MKEQSEDA-QMLFTRMMEMGITPDKFTYATVLDTCANLASAGL--GKQIHAQVIKKELQS 594
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D + S L+DMY K G + +S+ +F ++ + W A+I A HG E + F+ M
Sbjct: 595 DVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 654
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+ ++P+ +TF+S+L C G+I KG F M +DY ++P HYS MVD+LG+ G++
Sbjct: 655 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 714
Query: 511 EEAEELVGQIPGGPGLSVLQSLLGACRIH-GNVEMGERIADALMKMEPAGSGSYVLMSNL 569
+ A EL+ ++P + ++LLG C IH NVE+ E AL++++P S +Y L+SN+
Sbjct: 715 KRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNV 774
Query: 570 YAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
YA+ G WE V+ LR+ M+ ++KE G SW ++ D LH F GD HPR EEIY
Sbjct: 775 YADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELK--DELHVFLVGDKAHPRWEEIYEELG 832
Query: 630 CLGSEMK 636
+ SEMK
Sbjct: 833 LIYSEMK 839
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 270/544 (49%), Gaps = 38/544 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS---FALRMNLIGVVFDA 57
+N Y KS KA FN + D+VSWN++LSG+ ++ + L + M G FD
Sbjct: 79 INGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDG 138
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L C E G+Q+H ++V+ G D++V +AL+ MY++ R VE+ RVF
Sbjct: 139 RTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG 198
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P K+SVSW+AI++G Q+ + A+ EM + + + S +C L L
Sbjct: 199 IPEKNSVSWSAIIAGCVQNNLLSL-ALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 257
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G Q+H ++K + V + Y+KC+ DA +F + + N S+ MI+ +
Sbjct: 258 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQ 317
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+ LF + G+ ++++ G+ A ++ + EG I+ L IK++ + V
Sbjct: 318 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCV 377
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N I MY + +++ ++ +VFDE+ R+ +SWNA+I+ + QNG + F +++
Sbjct: 378 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 437
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ +TFGSVL A SL +G HS I+K G+ S+ VG +L+DMY K G I E+
Sbjct: 438 EPDEFTFGSVLKACTGG---SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 494
Query: 412 QRVFNE---------TQEKSE-----------FAWTAIISALARHGDYESVMNQFKEMEN 451
+++ + T E+ E +W +IIS E F M
Sbjct: 495 EKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 554
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGR 509
G+ PD T+ +VL C G+ + ++K E D Y S +VDM + G
Sbjct: 555 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK---ELQSDVYISSTLVDMYSKCGD 611
Query: 510 LEEA 513
L ++
Sbjct: 612 LHDS 615
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 230/487 (47%), Gaps = 42/487 (8%)
Query: 67 CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSW 126
C G Q H+ ++ G +V N L+ +Y+ V A VFD MP +D VSW
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 127 NAI-------------------------------LSGYTQDGDYGVEAILALIEMMRKGL 155
N + LSGY Q+G+ +++I ++M R G
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGE-TLKSIEVFVDMGRAGT 134
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
D +F C ++ LG QIHGV +++G T V + L+ Y+K + ++ +
Sbjct: 135 EFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLR 194
Query: 216 VFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
VF+ + ++N +SW+ +I+ ++ A+ FKEM+ + + ++ + + +
Sbjct: 195 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
++ G +H +K++F ++ V + MYA+ ++MQD++ +FD+ S+NA+I+G
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITG 314
Query: 331 YAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
Y+Q A+ F ++ + + V A + +S G + + IK L
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLS--EGLQIYDLAIKSSLS 372
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
D V +A +DMYGK ++ E+ RVF+E + + +W AII+A ++G + F M
Sbjct: 373 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 432
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
+ PD TF SVL C G + G + S++K S S ++DM + G
Sbjct: 433 LRSRIEPDEFTFGSVLKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCS-LIDMYSKCGM 490
Query: 510 LEEAEEL 516
+EEAE++
Sbjct: 491 IEEAEKI 497
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 169/385 (43%), Gaps = 40/385 (10%)
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
A C + LELGKQ H I G+ V N L+ Y+ A+ VF RM R+V
Sbjct: 13 AVECAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDV 72
Query: 226 ISWTTMIS-----------------MNREDAVS-------------------LFKEMRLD 249
+SW MI+ M D VS +F +M
Sbjct: 73 VSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRA 132
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
G + TF ++ S G IHG+ ++ ++ + L+ MYA+ + +S
Sbjct: 133 GTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVES 192
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAA 368
+VF + + +SW+A+I+G QN L A++ F + K + + + SVL + A
Sbjct: 193 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAAL 252
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
++ L G + H+H +K +D IV +A LDMY K ++ ++Q +F++++ + ++ A
Sbjct: 253 SELRL--GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNA 310
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+I+ ++ + F + + G+ D I+ V C + +G ++D +K
Sbjct: 311 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKS- 369
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEA 513
+ + +DM G+ L EA
Sbjct: 370 SLSLDVCVANAAIDMYGKCQALAEA 394
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 222/684 (32%), Positives = 360/684 (52%), Gaps = 53/684 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+N+Y + G A +F+ ++N ++V+W ++SG+ K D+A + M G + +
Sbjct: 141 INIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNH 200
Query: 58 VTYSTALSFCLDH--EGFLFGLQLHSLIVKFGLDSEVYVGNALITMY-SRWGRLVEARRV 114
+ +AL C + G G+Q+H LI K S+V V N LI+MY S +AR V
Sbjct: 201 YAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSV 260
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD + ++S+SWN+I+S Y++ GD V A M ++GL + + E+
Sbjct: 261 FDGIGIRNSISWNSIISVYSRRGD-AVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEG 319
Query: 175 LELGKQIHGVSIKMGYGTH-VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
G+++H I+ G + V++GN L++ Y+K DA VF M +++ +SW ++IS
Sbjct: 320 RRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLIS 379
Query: 234 ---MNR--EDAVSLFKEM-RLDGVCPNDV------------------------------- 256
N EDA +F M D V N V
Sbjct: 380 GLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRV 439
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
TFI ++ A+S +L + IH L +K + ++ N L++ Y + M + EK+F +
Sbjct: 440 TFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM 499
Query: 317 S-CREIISWNALISGYAQNGLSLAAVQ-AFFGVIKESKPNAYTFGSVLNAVGAAEDISLK 374
S R+ +SWN++ISGY N L A+ +F + K + +++TF ++L+A + +L+
Sbjct: 500 SETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVA--TLE 557
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G H+ I+ L+SD +VGSAL+DMY K G I + R F ++ ++W ++IS A
Sbjct: 558 RGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYA 617
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
RHG E + F M G PD +TF+ VL+ C G + +G F SM + Y + P
Sbjct: 618 RHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRV 677
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA-CRIHG-NVEMGERIADAL 552
+H+SCMVD+LGR G+L+E + + +P P + + +++LGA CR +G N E+G R A+ L
Sbjct: 678 EHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEML 737
Query: 553 MKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFS 612
+++EP + +YVL++N+YA WE VA R MK V+KE G SW + DG+H F
Sbjct: 738 LELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMK--DGVHVFV 795
Query: 613 SGDNTHPRSEEIYRMAECLGSEMK 636
+GD HP + IY L +M+
Sbjct: 796 AGDKLHPEKDLIYDKLRELNRKMR 819
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 245/495 (49%), Gaps = 63/495 (12%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
+LH +K+G +++ N LI +Y R G L A+++FDEM N++ V+W ++SGYTQ+G
Sbjct: 120 ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNG 179
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE--KNLELGKQIHGVSIKMGYGTHVS 195
EA +M+R G +H +F SA AC +LG QIHG+ K YG+ V
Sbjct: 180 KPD-EACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVV 238
Query: 196 VGNVLMSTYSKC-EVTGDANKVFRRMHDRNVISWTTMISM--NREDAVS---LFKEMRLD 249
V NVL+S Y C + DA VF + RN ISW ++IS+ R DAVS LF M+ +
Sbjct: 239 VCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKE 298
Query: 250 GVC----PNDVTFIGLIHAISIGNLVKEGRM----IHGLCIKTNFL-SEPSVCNCLITMY 300
G+ PND A S ++++EGR +H I+T ++ ++ N L+ MY
Sbjct: 299 GLGFSFKPND--------AFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMY 350
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--------------FG 346
A+ ++ D+ VF+ + ++ +SWN+LISG QN S A + F G
Sbjct: 351 AKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIG 410
Query: 347 VIKESKPNA-------------------YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
+ +S+ + TF ++L+AV + + H + H+ ++K
Sbjct: 411 ALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSH--QIHALVLKYC 468
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQF 446
L D +G+ALL YGK G + E +++F E + E +W ++IS + M+
Sbjct: 469 LSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLV 528
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
M KG R DS TF ++L+ C + +G + ++ +E S +VDM +
Sbjct: 529 WFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRAC-LESDVVVGSALVDMYSK 587
Query: 507 VGRLEEAEELVGQIP 521
GR++ A +P
Sbjct: 588 CGRIDYASRFFELMP 602
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 189/392 (48%), Gaps = 55/392 (14%)
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
E +++H SIK G+ ++ + N L++ Y + G A K+F M +RN+++W +IS
Sbjct: 116 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 175
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI--SIGNLVKEGRMIHGLCIKTNFLS 288
++A + F++M G PN F + A S + K G IHGL KT + S
Sbjct: 176 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 235
Query: 289 EPSVCNCLITMYAR-FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ VCN LI+MY +S D+ VFD + R ISWN++IS Y++ G +++A F +
Sbjct: 236 DVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM 295
Query: 348 IKES-----KPN-AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLD 400
KE KPN A++ SVL + G+ H+H+I+ GL+ + + +G+ L++
Sbjct: 296 QKEGLGFSFKPNDAFSEFSVLEE-------GRRKGREVHAHVIRTGLNDNKVAIGNGLVN 348
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH------------------------ 436
MY K G+I ++ VF EK +W ++IS L ++
Sbjct: 349 MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSV 408
Query: 437 ----GDYESVMNQ----FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
D E+ ++Q F +M G +TF+++L+ + H+ H +++ Y
Sbjct: 409 IGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSL-HEVSHQIHALVLKY 467
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ + ++ G+ G + E E++ ++
Sbjct: 468 CLSDDTAIGNALLSCYGKCGEMNECEKIFARM 499
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 129/265 (48%), Gaps = 14/265 (5%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
TF LI+ +E R +H IK F+ + N LI +Y R + ++K+FDE+
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKH 375
S R +++W LISGY QNG A F +++ PN Y FGS L A + K
Sbjct: 161 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 220
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGK-RGSIFESQRVFNETQEKSEFAWTAIISALA 434
G + H I K SD +V + L+ MYG S +++ VF+ ++ +W +IIS +
Sbjct: 221 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 280
Query: 435 RHGDYESVMNQFKEMENKGV----RP-DSITFLSVLTVCGRNGM-IHKGRHLFDSMLKDY 488
R GD S + F M+ +G+ +P D+ + SVL R G +H H+ + L D
Sbjct: 281 RRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHA--HVIRTGLNDN 338
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEA 513
+ + +V+M + G + +A
Sbjct: 339 KVAIG----NGLVNMYAKSGAIADA 359
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 201/586 (34%), Positives = 321/586 (54%), Gaps = 15/586 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVF-DAVT 59
Y G A +F++L++P + WN ++ + DAL M G + D T
Sbjct: 127 YAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYT 186
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ + C G+ +H + G S ++V N+L+ MY G++ AR+VF+ M
Sbjct: 187 FPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVML 246
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ VSWN ++SG+ Q+G EA+ MM + D + SA +CGH K LELG
Sbjct: 247 KRSVVSWNTMISGWFQNGR-PEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGI 305
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM----- 234
++H + K + V N L+ YS+C +A+ VF +++VI+WT+MI+
Sbjct: 306 KVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNG 365
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
N + A++L M+LDGV PN VT L+ A + +K+G+ +H ++ S+ V
Sbjct: 366 NAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVT 425
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKP 353
LI MYA+ ++ S +VF + S + + WNAL+SG N L+ AV F +I+E +
Sbjct: 426 ALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEA 485
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N TF SV+ A D LK HS++++ G S V + L+DMY K GS+ + +
Sbjct: 486 NHATFNSVIPAYAILAD--LKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHK 543
Query: 414 VFNE--TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+F+E +EK W+ +I+ HG E+ + F +M + G++P+ ITF SVL C
Sbjct: 544 IFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHR 603
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ G LF M+++Y P P+HY+C+VD+LGR GRL+EA +L+ +P S+ +
Sbjct: 604 GLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGA 663
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
LLGAC IH NVE+GE A+ L ++EP +G+Y+L++N+YA G W+
Sbjct: 664 LLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWK 709
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 233/459 (50%), Gaps = 28/459 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+ MY G+ A +FN + +VSWNT++SG+ + ++AL+ M V D+
Sbjct: 226 LAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDS 285
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +AL C + G+++H L+ K L ++ V NAL+ MYSR G + EA VF E
Sbjct: 286 ATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAE 345
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
KD ++W ++++GY +G+ ++ LAL M+ G+ + V+ S SAC L+
Sbjct: 346 TKEKDVITWTSMINGYIMNGN--AKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLK 403
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GK +H ++ + V V L+ Y+KC + +VF + + + W ++S
Sbjct: 404 QGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLI 463
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ RE AV LFK M ++ V N TF +I A +I +K+ +H +++ F+S+
Sbjct: 464 HNELARE-AVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKI 522
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCRE--IISWNALISGYAQNGLSLAAVQAFFGVI 348
+V LI MY++ S+ + K+FDE+ +E II W+ LI+GY +G AV F ++
Sbjct: 523 AVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMV 582
Query: 349 KES-KPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMY 402
+PN TF SVL+A G +D G ++I+ S P+ + ++D+
Sbjct: 583 HSGMQPNEITFTSVLHACSHRGLVDD-----GLTLFKYMIE-NYPSSPLPNHYTCVVDLL 636
Query: 403 GKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G+ G + E+ + +++ W A++ A H + E
Sbjct: 637 GRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVE 675
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 231/480 (48%), Gaps = 22/480 (4%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
+++ + L Y+ G + AR++FD++ + WNAI+ Y G + +A+ M+
Sbjct: 117 IHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKG-FHFDALRVFDSMI 175
Query: 152 RKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
G D +F AC L +G IHG ++ G+ +++ V N L++ Y C
Sbjct: 176 CSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKV 235
Query: 211 GDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI 265
G A +VF M R+V+SW TMIS E+A+++F M V P+ T + + +
Sbjct: 236 GLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSC 295
Query: 266 SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWN 325
++ G +H L K + + V N L+ MY+R M ++ VF E +++I+W
Sbjct: 296 GHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWT 355
Query: 326 ALISGYAQNG-----LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
++I+GY NG L+L GV+ PNA T S+L+A A LK G+ H
Sbjct: 356 SMINGYIMNGNAKSALALCPAMQLDGVV----PNAVTLASLLSA--CASLCCLKQGKSLH 409
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
+ +++ LDSD +V +AL+DMY K ++ S +VF +T K W A++S L +
Sbjct: 410 AWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAR 469
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCM 500
+ FK M + V + TF SV+ + + +L +++ I + +
Sbjct: 470 EAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAV-ITGL 528
Query: 501 VDMLGRVGRLEEAEELVGQIPGG-PGLSVLQSLLGACRIHGNVEMGERIADALMK--MEP 557
+DM + G L+ A ++ +IP + V L+ +HG+ E + + ++ M+P
Sbjct: 529 IDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQP 588
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 192/386 (49%), Gaps = 18/386 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY + G D+A +F D+++W ++++G+ + AL+ M L GVV +A
Sbjct: 327 VDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNA 386
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT ++ LS C G LH+ +++ LDS+V V ALI MY++ + + +VF +
Sbjct: 387 VTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAK 446
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
K +V WNA+LSG + + EA+ M+ + + +H +F S A +L+
Sbjct: 447 TSMKRTVPWNALLSGLIHN-ELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQ 505
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISWTTMIS-- 233
+H ++ G+ + ++V L+ YSKC A+K+F + ++++I W+ +I+
Sbjct: 506 VMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGY 565
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE- 289
+ E AV LF +M G+ PN++TF ++HA S LV +G + I+ N+ S
Sbjct: 566 GMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIE-NYPSSP 624
Query: 290 -PSVCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG---YAQNGLSLAAVQAF 344
P+ C++ + R + ++ + + ++ S W AL+ + L A +
Sbjct: 625 LPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERL 684
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAED 370
F + ES N ++ AVG +D
Sbjct: 685 FELEPESTGNYILLANIYAAVGRWKD 710
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 8/248 (3%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNC---LITMYARFESMQDSEKVFDELSCREIISWNAL 327
+ + +++HG I + L P+ + L YA + + K+FD+LS + WNA+
Sbjct: 95 LNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAI 154
Query: 328 ISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
I Y G A++ F +I K P+ YTF V+ A +++ G H +
Sbjct: 155 IKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNV--GVLIHGRALV 212
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
G S+ V ++LL MY G + +++VFN ++S +W +IS ++G E +
Sbjct: 213 SGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAV 272
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLG 505
F M + V PDS T +S L CG + G + +++ H++ + + +VDM
Sbjct: 273 FNSMMDARVEPDSATIVSALPSCGHLKELELGIKV-HKLVQKNHLQEKIEVRNALVDMYS 331
Query: 506 RVGRLEEA 513
R G ++EA
Sbjct: 332 RCGGMDEA 339
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/641 (32%), Positives = 335/641 (52%), Gaps = 27/641 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI------GVV 54
+N Y K G+ KA IFN + D+VSWN++++G+ ++ S M L ++
Sbjct: 56 VNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDIL 115
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+A T + + G Q H+L+VK ++YV +L+ MY + G + + +V
Sbjct: 116 PNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKV 175
Query: 115 FDEMPNKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
F MP +++ +W+ ++SGY G + ++ + +G D+V FT+ S+
Sbjct: 176 FAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAAT 234
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ LG+QIH ++IK G V++ N L++ YSKCE +A K+F DRN I+W+ M+
Sbjct: 235 IYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 233 ---SMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S N E +AV LF M G+ P++ T +G+++A S ++EG+ +H +K F
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN-----GLSLAAVQ 342
L+ MYA+ + D+ K FD L R++ W +LISGY QN L L
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 343 AFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
G+I PN T SVL A + + L G++ H H IK G + +GSAL MY
Sbjct: 415 KTAGII----PNDPTMASVLKACSSLATLEL--GKQVHGHTIKHGFGLEVPIGSALSTMY 468
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K GS+ + VF T K +W A+IS L+ +G + + F+EM +G+ PD +TF+
Sbjct: 469 SKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFV 528
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
++++ C G + +G F+ M ++P DHY+CMVD+L R G+L+EA+E +
Sbjct: 529 NIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANI 588
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
GL + + LL AC+ HG E+G + LM + S +YV +S +Y G V +
Sbjct: 589 DHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERV 648
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEE 623
K M++ GV KEVG SW ++ + H F GD HP EE
Sbjct: 649 WKHMRANGVSKEVGCSWIELK--NQYHVFVVGDTMHPMIEE 687
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 245/461 (53%), Gaps = 23/461 (4%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G +H I++ G + + N L+ Y++ G+L +A +F+ + KD VSWN++++GY+Q
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG---HEKNLE---LGKQIHGVSIKMG 189
+G G+ + ++++ R+ +R + +A + G E +L+ +G+Q H + +KM
Sbjct: 93 NG--GISSSYTVMQLFRE-MRAQDI-LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNR---EDAV---S 241
+ V L+ Y K + D KVF M +RN +W+TM+S R E+A+ +
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
LF + +G +D F ++ +++ V GR IH + IK L ++ N L+TMY+
Sbjct: 209 LFLREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYS 267
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
+ ES+ ++ K+FD R I+W+A+++GY+QNG SL AV+ F + KP+ YT
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
VLNA ++ L+ G++ HS ++K+G + +AL+DMY K G + ++++ F+ QE
Sbjct: 328 VLNA--CSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE 385
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+ WT++IS ++ D E + ++ M+ G+ P+ T SVL C + G+ +
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+K P S + M + G LE+ + + P
Sbjct: 446 HGHTIKHGFGLEVPIG-SALSTMYSKCGSLEDGNLVFRRTP 485
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 234/510 (45%), Gaps = 76/510 (14%)
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
++NL G+ +HG I+ G T + NVL++ Y+KC A+ +F + ++V+SW +
Sbjct: 26 QQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNS 85
Query: 231 MISMNRED--------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
+I+ ++ + LF+EMR + PN T G+ A S GR H L +
Sbjct: 86 LITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV 145
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K + + V L+ MY + ++D KVF + R +W+ ++SGYA G A++
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIK 205
Query: 343 AFFGVIKESKPNA---YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F ++E + + Y F +VL+++ A + L G++ H IK GL + +AL+
Sbjct: 206 VFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGL--GRQIHCITIKNGLLGFVALSNALV 263
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
MY K S+ E+ ++F+ + +++ W+A+++ +++G+ + F M + G++P
Sbjct: 264 TMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEY 323
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLK---DYHIEPSPDHYSCMVDMLGRVGRLEEA--- 513
T + VL C + +G+ L +LK + H+ + + +VDM + G L +A
Sbjct: 324 TIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFAT----TALVDMYAKAGCLADARKG 379
Query: 514 --------------------------EELV--------GQIPGGPGLSVLQSLLGACRIH 539
E L+ G IP P ++ S+L AC
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMA---SVLKACSSL 436
Query: 540 GNVEMGERIADALMK----ME-PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
+E+G+++ +K +E P GS +S +Y++ G E ++ + +K V
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPIGSA----LSTMYSKCGSLEDGNLVFRRTPNKDV--- 489
Query: 595 VGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
SW + I GL GD EE+
Sbjct: 490 --VSWNAM--ISGLSHNGQGDEALELFEEM 515
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 122/244 (50%), Gaps = 14/244 (5%)
Query: 253 PNDVTFIG-LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ T + L H NLV GR +HG I+T + N L+ YA+ + +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVA-GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHS 70
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-----PNAYTFGSVLNAVG 366
+F+ + C++++SWN+LI+GY+QNG +++ + +E + PNAYT + A
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNG-GISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
+ + ++ G++ H+ ++K+ D V ++L+ MY K G + + +VF E++ + W
Sbjct: 130 SLQSSTV--GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTW 187
Query: 427 TAIISALARHGDYE---SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
+ ++S A G E V N F + +G D + F +VL+ + GR +
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCI 246
Query: 484 MLKD 487
+K+
Sbjct: 247 TIKN 250
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 98/229 (42%), Gaps = 16/229 (6%)
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+++ N +T + ++ +L G+ H II+ G + + L++ Y K G +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYES---VMNQFKEMENKGVRPDSITFLSVLT 466
++ +FN K +W ++I+ +++G S VM F+EM + + P++ T +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 467 VCGRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
GR ++K D +++ S +V M + G +E+ ++ +P
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTS------LVGMYCKAGLVEDGLKVFAYMP 180
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGS-YVLMSNL 569
+++ G VE ++ + ++ + GS S YV + L
Sbjct: 181 -ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVL 228
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 205/609 (33%), Positives = 339/609 (55%), Gaps = 18/609 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFD 56
+++Y K G +A +F+ ++NP +VSW +LSG+ KS+DA S AL M GV +
Sbjct: 114 VDLYAKCGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFS-ALEIFREMRHSGVEIN 172
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ T ++ +S C Q+H+ + K G + V ALI+M S+ G + + RVF+
Sbjct: 173 SCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFE 232
Query: 117 EMPN-KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
++ + + N +++ ++Q+ G +AI M+++GL D S S S L
Sbjct: 233 DLDDIRRQNIVNVMVTSFSQNKKPG-KAIRLFTRMLQEGLNPDEFSVCSLLSVL---DCL 288
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
LGKQ+H ++K G ++VG+ L + YSKC ++ +F+ + ++ W +MIS
Sbjct: 289 NLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGF 348
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E +A+ LF EM +G P++ T ++ S + + IHG ++
Sbjct: 349 NEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGM 408
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ + L+ Y++ S++ + KV+D L + +S ++LISGY+Q+GL F ++
Sbjct: 409 PLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMS 468
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
++Y S+L A +E+ L G + H++I K+GL ++P VGS+LL MY K GSI
Sbjct: 469 GFSMDSYAISSILKAAVLSEESEL--GAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIE 526
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ + F++ AWTA+I++ A+HG + + M+ KG +PD +TF+ VL+ C
Sbjct: 527 DCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACS 586
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G +SM+KDY IEP HY CMVD LGR GRL EAE + P P V
Sbjct: 587 HGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVW 646
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+LL AC+I+G+VE+G+ A +++EP+ +G+YV +SN+ AE G+W+ V RK MK
Sbjct: 647 GTLLAACKIYGDVELGKLAAKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGT 706
Query: 590 GVRKEVGFS 598
GV+KE G+S
Sbjct: 707 GVQKEPGWS 715
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 273/564 (48%), Gaps = 45/564 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFD---- 56
++ + K+ +F+ A +F + + ++ WNT+++G ALR G VFD
Sbjct: 14 IDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAG----------ALRNQNYGAVFDLFHE 63
Query: 57 ---------AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
+ TYS+ L+ C E FG + + ++K G + +V+V +++ +Y++ G
Sbjct: 64 MCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGH 122
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
+ EAR VF + N VSW +LSGYT+ D A+ EM G+ ++ + TS S
Sbjct: 123 MAEAREVFSRISNPSVVSWTVMLSGYTKSND-AFSALEIFREMRHSGVEINSCTVTSVIS 181
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN---KVFRRMHD-- 222
ACG + Q+H K G+ SV L+S SK +GD N +VF + D
Sbjct: 182 ACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSK---SGDINLSERVFEDLDDIR 238
Query: 223 -RNVIS-WTTMISMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
+N+++ T S N++ A+ LF M +G+ P++ + L+ + NL G+ +H
Sbjct: 239 RQNIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLNL---GKQVH 295
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
+K+ + + +V + L TMY++ S+++S +F E+ ++ W ++ISG+ + G
Sbjct: 296 SYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLR 355
Query: 339 AAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A+ F ++ E + P+ T +VL + SL + H + ++ G+D +GSA
Sbjct: 356 EAIGLFSEMLDEGTSPDESTLAAVLTVCSSLP--SLPRSKEIHGYTLRAGIDRGMPLGSA 413
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L++ Y K GS+ +++V++ E + +++IS ++HG + F++M G D
Sbjct: 414 LVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMD 473
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
S S+L + G + + K + P S ++ M + G +E+ +
Sbjct: 474 SYAISSILKAAVLSEESELGAQVHAYITK-IGLCTEPSVGSSLLTMYSKFGSIEDCCKAF 532
Query: 518 GQIPGGPGLSVLQSLLGACRIHGN 541
QI GP L +L+ + HG
Sbjct: 533 SQI-NGPDLIAWTALIASYAQHGK 555
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 228/460 (49%), Gaps = 18/460 (3%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
V ++LI +S+ R +A +VF + + + WN I++G ++ +YG A+ L M
Sbjct: 9 VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYG--AVFDLFHEMCN 66
Query: 154 GL-RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD 212
G + D +++S +AC + L GK + IK G V V ++ Y+KC +
Sbjct: 67 GFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAKCGHMAE 125
Query: 213 ANKVFRRMHDRNVISWTTMIS--MNREDAVS---LFKEMRLDGVCPNDVTFIGLIHAISI 267
A +VF R+ + +V+SWT M+S DA S +F+EMR GV N T +I A
Sbjct: 126 AREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGR 185
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL-SCREIISWNA 326
++V E +H K+ F + SV LI+M ++ + SE+VF++L R N
Sbjct: 186 PSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNV 245
Query: 327 LISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
+++ ++QN A++ F +++E P+ ++ S+L+ + L G++ HS+ +K
Sbjct: 246 MVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDC-----LNLGKQVHSYTLK 300
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
GL D VGS+L MY K GS+ ES +F E K W ++IS +G +
Sbjct: 301 SGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGL 360
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLG 505
F EM ++G PD T +VLTVC + + + + L+ I+ S +V+
Sbjct: 361 FSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRA-GIDRGMPLGSALVNTYS 419
Query: 506 RVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+ G L+ A ++ ++P +S SL+ HG V+ G
Sbjct: 420 KCGSLKLARKVYDRLPEMDPVSC-SSLISGYSQHGLVQDG 458
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 159/344 (46%), Gaps = 20/344 (5%)
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSL 242
MGY + V + L+ +SK DA KVFR NV W T+I+ N L
Sbjct: 1 MGYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDL 60
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
F EM P+ T+ ++ A + ++ G+++ IK + VC ++ +YA+
Sbjct: 61 FHEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAK 119
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGS 360
M ++ +VF +S ++SW ++SGY ++ + +A++ F ++ S + N+ T S
Sbjct: 120 CGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALE-IFREMRHSGVEINSCTVTS 178
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
V++A G + + H+ + K G D V +AL+ M K G I S+RVF + +
Sbjct: 179 VISACGRPSMVC--EASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDD 236
Query: 421 -KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV--CGRNGMIHKG 477
+ + ++++ +++ + F M +G+ PD + S+L+V C G
Sbjct: 237 IRRQNIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLNLGKQVHS 296
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
L ++ D + S + M + G LEE+ L +IP
Sbjct: 297 YTLKSGLILDLTVGSS------LFTMYSKCGSLEESYSLFQEIP 334
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 201/588 (34%), Positives = 317/588 (53%), Gaps = 16/588 (2%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T++ L C G +H+ + GL SE AL MY + R +ARRVFD M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNLE 176
P++D V+WNA+++GY ++G A+ A++ M + G R D V+ S AC + L
Sbjct: 78 PSRDRVAWNAVVAGYARNG-LPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALH 136
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
+++H +++ G V+V ++ Y KC A VF M RN +SW MI
Sbjct: 137 ACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYA 196
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ N +A++LF M +GV D + + + A + E R +H L ++ S S
Sbjct: 197 DNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVS 256
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREI-ISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N LIT YA+ + + +VF+EL ++ ISWNA+I G+ QN A + F + E
Sbjct: 257 VTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLE 316
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQR-CHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ +P+++T SV+ AV DIS R H + I+ LD D V +AL+DMY K G +
Sbjct: 317 NVRPDSFTLVSVIPAVA---DISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++R+F+ +++ W A+I HG ++ + F+EM+ G P+ TFLSVL C
Sbjct: 374 SIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAAC 433
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +G+ F SM KDY +EP +HY MVD+LGR G+L+EA + +P PG+SV
Sbjct: 434 SHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISV 493
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
++LGAC++H NVE+ E A + ++ P +VL++N+YA W+ VA +R M+
Sbjct: 494 YGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEK 553
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
KG++K G W+ + + +H F SG H +++IY L E+K
Sbjct: 554 KGLQKTPG--WSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIK 599
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 223/423 (52%), Gaps = 16/423 (3%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMN--LIGVVFD 56
NMY K + A +F+ + + D V+WN V++G+ ++ A+ +RM G D
Sbjct: 59 NMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPD 118
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+VT + L C D ++H+ ++ GLD V V A++ Y + G + AR VFD
Sbjct: 119 SVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFD 178
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP ++SVSWNA++ GY +G+ EA+ M+++G+ + S +A ACG L+
Sbjct: 179 CMPVRNSVSWNAMIDGYADNGN-ATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLD 237
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV-ISWTTMI--- 232
+++H + +++G ++VSV N L++TY+KC+ A +VF + ++ ISW MI
Sbjct: 238 EVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGF 297
Query: 233 SMNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ N EDA LF M+L+ V P+ T + +I A++ + + R IHG I+ +
Sbjct: 298 TQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDV 357
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V LI MY++ + + ++FD R +I+WNA+I GY +G AAV+ F +
Sbjct: 358 YVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGT 417
Query: 351 -SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSI 408
S PN TF SVL A A + GQ+ + + K GL+ ++D+ G+ G +
Sbjct: 418 GSLPNETTFLSVLAACSHAGLVD--EGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKL 475
Query: 409 FES 411
E+
Sbjct: 476 DEA 478
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 152/300 (50%), Gaps = 13/300 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++ YCK G + A +F+ + + VSWN ++ G+ + +A++ RM GV
Sbjct: 161 LDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTD 220
Query: 58 VTYSTALSFCLDHEGFLFGL-QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ AL C G+L + ++H L+V+ GL S V V NALIT Y++ R A +VF+
Sbjct: 221 ASVLAALQAC-GELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFN 279
Query: 117 EMPNKDS-VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
E+ NK + +SWNA++ G+TQ+ + +A M + +R D + S A +
Sbjct: 280 ELGNKKTRISWNAMILGFTQN-ECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDP 338
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+ IHG SI+ V V L+ YSKC A ++F DR+VI+W MI
Sbjct: 339 LQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGY 398
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ AV LF+EM+ G PN+ TF+ ++ A S LV EG+ +K ++ EP
Sbjct: 399 GSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFA-SMKKDYGLEP 457
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 212/657 (32%), Positives = 354/657 (53%), Gaps = 28/657 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKS---DDALS-FALRMNLIGVVF 55
+++Y FD A +F+ + NP +I N +++G+ ++ D+AL F M +
Sbjct: 45 ISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKP 104
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D+ TY + L C + G +H+ +VK GL ++ VG++L+ MY++ A ++F
Sbjct: 105 DSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLF 164
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKN 174
DEMP+KD WN ++S Y Q G + E L MMR+ G D V+ T+A S+C +
Sbjct: 165 DEMPDKDVACWNTVISCYYQSGKF--EEALRYFGMMRRFGFEPDSVTITTAISSCARLLD 222
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L+ G++IH + G+ V L+ Y KC A +VF +M ++ V++W +MI+
Sbjct: 223 LDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMING 282
Query: 235 N--REDAVS---LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ D +S LFK M +GV P T + A S + EG+ +HG I+ +
Sbjct: 283 YGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPD 342
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ + L+ +Y + ++ +E +F + +SWN +ISGY G A++ FG +
Sbjct: 343 IFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALR-LFGEMS 401
Query: 350 ES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+S +P+A TF SVL A ++ +L+ G+ H+ I++ L ++ +V ALLDMY K G+
Sbjct: 402 KSFVEPDAITFTSVLAA--CSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGA 459
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ E+ VF E+ +WT++I+A HG + F EM V+PD +TFL++L+
Sbjct: 460 VEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSA 519
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG-GPGL 526
C G++ G + F+ M+ Y I P +HYSC++ +LGR GRL EA E++ P
Sbjct: 520 CSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDF 579
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
+L +L ACR+H N+++G IA+ L+ +P S +Y+++SN+YA G W+ V ++R M
Sbjct: 580 QLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKM 639
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
K G++K G SW ++ + + F DN+H E I G+ + YL S E
Sbjct: 640 KDLGLKKNPGCSWIEIN--EKIVPFFVEDNSHYHLEGI-------GNILSYLTSHME 687
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 237/487 (48%), Gaps = 16/487 (3%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSW-NAILSGYT 134
G LH +V GL ++VYV LI++Y A+ VFD + N +S N +++GYT
Sbjct: 22 GKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYT 81
Query: 135 QDGDYGVEAILALIE--MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
++ Y + L L + M L+ D ++ S ACG + + LG+ IH +K G
Sbjct: 82 RNCMY--DEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMV 139
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMR 247
+ VG+ L+ Y+KC A K+F M D++V W T+IS E+A+ F MR
Sbjct: 140 DIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMR 199
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
G P+ VT I + + + GR IH + + F + V L+ MY + ++
Sbjct: 200 RFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLE 259
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVG 366
+ +VF+++ + +++WN++I+GY G ++ +Q F + E KP T +
Sbjct: 260 MAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTT--LTSTLMA 317
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
++ L G+ H +II+ + D + S+L+D+Y K G + ++ +F + + +W
Sbjct: 318 CSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSW 377
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+IS G + F EM V PD+ITF SVL C + + KGR + + ++
Sbjct: 378 NVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHN-LIV 436
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV-EMG 545
+ ++ + ++DM + G +EEA + +P +S S++ A HG V E
Sbjct: 437 ERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVS-WTSMITAYGSHGRVYEAL 495
Query: 546 ERIADAL 552
E A+ L
Sbjct: 496 ELFAEML 502
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 136/268 (50%), Gaps = 8/268 (2%)
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL- 316
I L+ A +K+G+++H + ++ VC LI++Y ++ VFD +
Sbjct: 6 LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLK 374
+ EI N L++GY +N + A+ F ++ KP++YT+ SVL A G + L
Sbjct: 66 NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVL- 124
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
GQ H+ ++K GL D +VGS+L+ MY K + ++F+E +K W +IS
Sbjct: 125 -GQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYY 183
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD-YHIEPS 493
+ G +E + F M G PDS+T + ++ C R + +GR + ++ + ++
Sbjct: 184 QSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSF 243
Query: 494 PDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +VDM G+ G+LE A E+ Q+P
Sbjct: 244 VS--AALVDMYGKCGQLEMAIEVFEQMP 269
>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/643 (32%), Positives = 334/643 (51%), Gaps = 55/643 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----------------------- 37
++ Y KS +FN + NPD+ SW T+LS K
Sbjct: 95 LSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWN 154
Query: 38 -----------SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKF 86
++ AL+ M+ +GV D T+++ LS C E FG ++H+L++K
Sbjct: 155 AIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLC-SLELLDFGREVHTLVIKT 213
Query: 87 GLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK--DSVSWNAILSGYTQDGDYGVEAI 144
G V NAL+TMY G++ +A VF+E + D +++N ++ G G EA+
Sbjct: 214 GFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGR-DEEAL 272
Query: 145 LALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTY 204
+ EM LR ++F S S+C + + Q+H +IKMG+ V N M+ Y
Sbjct: 273 IMFKEMQEACLRPTELTFVSVMSSCSSAR---VSHQVHAQAIKMGFEACTPVSNAAMTMY 329
Query: 205 SKCEVTGDANKVFRRMHDRNVISWTTMISMNRED------AVSLFKEMRLDGVCPNDVTF 258
S C + VF R+ ++++ISW +I MN A+ F +M+ G+ P++ T
Sbjct: 330 SSCGNLHAVHMVFDRLEEKDLISWNIII-MNYAQGNFYRLAILAFLQMQRAGIEPDEFTI 388
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC 318
L+ + +VK M L K S+ V N L++ +++ ++ + +VF+ +S
Sbjct: 389 GSLLASSESLEIVK---MFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSS 445
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQ 377
+ISWN +ISG+ NG +L ++ F+ ++ + KPNAYT VL+ + +L+HG+
Sbjct: 446 PNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASIS--ALRHGK 503
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
+ H +I++ G+ S +G+AL+ MY K G + S R+FN + +W A+ISA A+HG
Sbjct: 504 QIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHG 563
Query: 438 DYESVMNQFKEMENKG-VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
+ ++ FK M++ G V+PD TF +VL+ C G++ G +F+SM+ DY EP DH
Sbjct: 564 KGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADH 623
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
SC+VD+LGR G LEEAE L+ S+ +L AC HGN+ +G +A L+++E
Sbjct: 624 LSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEIE 683
Query: 557 PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSW 599
YVL+SN+YA G WE A R M+ V K+ G SW
Sbjct: 684 QNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCSW 726
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 156/581 (26%), Positives = 262/581 (45%), Gaps = 88/581 (15%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T S+ L+ C + G QLH+ ++ GL + +VGN L++ Y++ LV +RVF
Sbjct: 52 DHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVF 111
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYG-----------------------------VEAILA 146
+E+ N D SW +LS T+ G G E L
Sbjct: 112 NEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALN 171
Query: 147 LI-EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
L EM + G+R D +F S S C E L+ G+++H + IK G+ SV N L++ Y
Sbjct: 172 LFREMHQLGVRHDKYTFASVLSLCSLEL-LDFGREVHTLVIKTGFLVRASVINALLTMYF 230
Query: 206 KCEVTGDANKVFRR----MHDRNVISWTTMI----SMNR-EDAVSLFKEMRLDGVCPNDV 256
DA +VF +HD I++ MI S+ R E+A+ +FKEM+ + P ++
Sbjct: 231 NSGKVADAYEVFEEAESTVHDD--ITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTEL 288
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
TF+ ++ + S + + +H IK F + V N +TMY+ ++ VFD L
Sbjct: 289 TFVSVMSSCSSARVSHQ---VHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRL 345
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKH 375
+++ISWN +I YAQ A+ AF + + +P+ +T GS+L A SL+
Sbjct: 346 EEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLL-----ASSESLEI 400
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
+ + + K GL+S V +AL+ + K G I ++ +VFN + +W IIS
Sbjct: 401 VKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLF 460
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL--------------- 480
+G + QF E+ ++P++ T VL++C + G+ +
Sbjct: 461 NGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSL 520
Query: 481 -------------FDSMLKDYHIEPSPD--HYSCMVDMLGRVGRLEEAEELVG--QIPGG 523
D L+ +++ D ++ M+ + G+ +EA Q GG
Sbjct: 521 GNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGG 580
Query: 524 --PGLSVLQSLLGACRIHGNVEMGERIADALMK---MEPAG 559
P + ++L AC G V+ G RI ++++ EP
Sbjct: 581 VKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGA 621
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 208/455 (45%), Gaps = 54/455 (11%)
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
L+ DH + +S +AC + + G Q+H SI+ G + VGN L+S Y+K +
Sbjct: 49 LKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQ 108
Query: 215 KVFRRMHDRNVISWTTMISM------------------------------------NRED 238
+VF + + +V SWTT++S + E
Sbjct: 109 RVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEI 168
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
A++LF+EM GV + TF ++ S+ L+ GR +H L IKT FL SV N L+T
Sbjct: 169 ALNLFREMHQLGVRHDKYTFASVLSLCSL-ELLDFGREVHTLVIKTGFLVRASVINALLT 227
Query: 299 MYARFESMQDSEKVFDEL--SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPN 354
MY + D+ +VF+E + + I++N +I G A G A+ F ++E+ +P
Sbjct: 228 MYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEAL-IMFKEMQEACLRPT 286
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
TF SV+++ +A + + H+ IK+G ++ V +A + MY G++ V
Sbjct: 287 ELTFVSVMSSCSSA-----RVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMV 341
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F+ +EK +W II A+ Y + F +M+ G+ PD T S+L ++
Sbjct: 342 FDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIV 401
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+F +++ + + + +V + G++E+A ++ + P L +++
Sbjct: 402 ----KMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNM-SSPNLISWNTIIS 456
Query: 535 ACRIHGNVEMG-ERIADALMK-MEPAGSGSYVLMS 567
+G G E+ + LM ++P +++S
Sbjct: 457 GFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLS 491
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLK 374
+ ++I N L++ ++ + A+VQ F + + KP+ +T S L A +
Sbjct: 13 AAEQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAA-- 70
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G + H++ I+ GL + VG+ LL Y K + QRVFNE + ++WT ++SA
Sbjct: 71 SGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACT 130
Query: 435 RHGDY-------------------------------ESVMNQFKEMENKGVRPDSITFLS 463
+ G E +N F+EM GVR D TF S
Sbjct: 131 KLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFAS 190
Query: 464 VLTVC 468
VL++C
Sbjct: 191 VLSLC 195
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 307/574 (53%), Gaps = 44/574 (7%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-G 154
N L+ YS+ G L E R F+++P++D V+WN ++ GY+ G G A+ A MM+
Sbjct: 73 NNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGA-AVKAYNTMMKDFS 131
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
L V+ + ++ LGKQIHG IK+G+ +++ VG+ L+ YSK DA
Sbjct: 132 SNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAK 191
Query: 215 KVFRRMHDRNVI------------------------------SWTTMIS------MNRED 238
KVF + DRN + SW+ MI M +E
Sbjct: 192 KVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKE- 250
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
A+ F+EM+++G+ + F ++ A + +GR IH I+TN V + LI
Sbjct: 251 AIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALID 310
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYT 357
MY + + + ++ VFD + + ++SW A++ GY Q G + AV+ F + + P+ YT
Sbjct: 311 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYT 370
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
G ++A A SL+ G + H I GL V ++L+ +YGK G I +S R+FNE
Sbjct: 371 LGQAISA--CANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNE 428
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
+ E +WTA++SA A+ G + F +M G++PD +T V++ C R G++ KG
Sbjct: 429 MNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKG 488
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
+ F+ M+ +Y I PS HYSCM+D+ R GR+EEA + +P P +LL ACR
Sbjct: 489 QRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACR 548
Query: 538 IHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGF 597
GN+E+G+ A++L++++P Y L+S++YA KG W+ VA LR+GMK K VRKE G
Sbjct: 549 NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQ 608
Query: 598 SWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
SW + LH FS+ D + P S++IY E L
Sbjct: 609 SW--IKWKGKLHSFSADDESSPYSDQIYAKLEEL 640
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 230/479 (48%), Gaps = 45/479 (9%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDA----VT 59
Y KSG + F L + D V+WN ++ G+ S + N + F + VT
Sbjct: 79 YSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVT 138
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
T L + G Q+H ++K G +S + VG+ L+ MYS+ G + +A++VF +
Sbjct: 139 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLD 198
Query: 120 N------------------------------KDSVSWNAILSGYTQDGDYGVEAILALIE 149
+ KDSVSW+A++ G Q+G EAI E
Sbjct: 199 DRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNG-MEKEAIECFRE 257
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M +GL++D F S ACG + G+QIH I+ H+ VG+ L+ Y KC+
Sbjct: 258 MKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKC 317
Query: 210 TGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
A VF RM +NV+SWT M+ + +AV +F +M+ G+ P+ T I A
Sbjct: 318 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISA 377
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+ + ++EG HG I + +V N L+T+Y + + DS ++F+E++ R+ +SW
Sbjct: 378 CANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSW 437
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
A++S YAQ G ++ A+Q F +++ KP+ T V++A A + + GQR +
Sbjct: 438 TAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLV--EKGQRYFELM 495
Query: 384 I-KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYE 440
I + G+ S ++D++ + G I E+ N + + WT ++SA G+ E
Sbjct: 496 INEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLE 554
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 122/242 (50%), Gaps = 8/242 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MYCK A +F+ + ++VSW ++ G+ ++ +A+ L M G+ D
Sbjct: 309 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDH 368
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T A+S C + G Q H + GL + V N+L+T+Y + G + ++ R+F+E
Sbjct: 369 YTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNE 428
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSW A++S Y Q G VEAI +M++ GL+ D V+ T SAC +E
Sbjct: 429 MNVRDEVSWTAMVSAYAQFGR-AVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEK 487
Query: 178 GKQIHGVSIKMGYGTHVSVGN--VLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMISM 234
G++ + I YG S G+ ++ +S+ +A M R + I WTT++S
Sbjct: 488 GQRYFELMINE-YGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSA 546
Query: 235 NR 236
R
Sbjct: 547 CR 548
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 207/639 (32%), Positives = 357/639 (55%), Gaps = 23/639 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFD 56
++MY K+ A +F+ D V WN++LS + KS + L M++ G +
Sbjct: 187 VSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPN 246
Query: 57 AVTYSTALSFCLDHEGFLF---GLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEAR 112
+ T +AL+ C +GF + G ++H+ ++K SE+YV NALI MY+R G++ +A
Sbjct: 247 SYTIVSALTAC---DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAE 303
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
R+ +M N D V+WN+++ GY Q+ Y EA+ +M+ G + D VS TS +A G
Sbjct: 304 RILRQMNNADVVTWNSLIKGYVQNLMYK-EALEFFSDMIAAGHKSDEVSMTSIIAASGRL 362
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
NL G ++H IK G+ +++ VGN L+ YSKC +T + F RMHD+++ISWTT+I
Sbjct: 363 SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVI 422
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + +A+ LF+++ + +++ ++ A S+ + + IH ++ L
Sbjct: 423 AGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL 482
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + N L+ +Y + +M + +VF+ + ++++SW ++IS A NG AV+ F +
Sbjct: 483 -DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM 541
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ E+ +A + + AA +L G+ H ++++ G + + A++DMY G
Sbjct: 542 V-ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 600
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ VF+ + K +T++I+A HG ++ + F +M ++ V PD I+FL++L
Sbjct: 601 LQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 660
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ +GR M +Y +EP P+HY C+VDMLGR + EA E V + P
Sbjct: 661 CSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAE 720
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V +LL ACR H E+GE A L+++EP G+ VL+SN++AE+G W V +R MK
Sbjct: 721 VWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMK 780
Query: 588 SKGVRKEVGFSWADVGDIDG-LHGFSSGDNTHPRSEEIY 625
+ G+ K G SW ++DG +H F++ D +HP S+EIY
Sbjct: 781 ASGMEKHPGCSWI---EMDGKVHKFTARDKSHPESKEIY 816
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 285/569 (50%), Gaps = 22/569 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + + +WNT++ + + + AL+ M + GV ++ L C
Sbjct: 101 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD 160
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK-DSVSWNAILS 131
G +LHSL+VK G S ++ NAL++MY++ L ARR+FD K D+V WN+ILS
Sbjct: 161 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 220
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG-Y 190
Y+ G +E + EM G + + SA +AC +LGK+IH +K +
Sbjct: 221 SYSTSGK-SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 279
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKE 245
+ + V N L++ Y++C A ++ R+M++ +V++W ++I ++ ++A+ F +
Sbjct: 280 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 339
Query: 246 MRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
M G ++V+ +I A + NL+ G +H IK + S V N LI MY++
Sbjct: 340 MIAAGHKSDEVSMTSIIAASGRLSNLLA-GMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 398
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLN 363
+ F + +++ISW +I+GYAQN + A++ F V K+ + + GS+L
Sbjct: 399 LTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 458
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
A + + + + H HI++ GL D ++ + L+D+YGK ++ + RVF + K
Sbjct: 459 ASSVLKSMLIV--KEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDV 515
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
+WT++IS+ A +G+ + F+ M G+ DS+ L +L+ ++KGR +
Sbjct: 516 VSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCY 575
Query: 484 ML-KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
+L K + +E S +VDM G L+ A+ + +I GL S++ A +HG
Sbjct: 576 LLRKGFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHGCG 632
Query: 543 EMGERIADALMKMEPAGSGSYVLMSNLYA 571
+ + D M+ E ++ LYA
Sbjct: 633 KAAVELFDK-MRHENVSPDHISFLALLYA 660
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 191/368 (51%), Gaps = 13/368 (3%)
Query: 107 RLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSA 165
R V +VFDEMP++ + +WN ++ Y +G+ + LAL MR +G+ L SF +
Sbjct: 94 RAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPA--SALALYWNMRVEGVPLGLSSFPAL 151
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-N 224
AC +++ G ++H + +K+GY + + N L+S Y+K + A ++F ++ +
Sbjct: 152 LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 211
Query: 225 VISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
+ W +++S + + LF+EM + G PN T + + A + K G+ IH
Sbjct: 212 AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 271
Query: 280 LCIKTN-FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
+K++ SE VCN LI MY R M +E++ +++ ++++WN+LI GY QN +
Sbjct: 272 SVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYK 331
Query: 339 AAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A++ F +I K + + S++ A G + L G H+++IK G DS+ VG+
Sbjct: 332 EALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN--LLAGMELHAYVIKHGWDSNLQVGNT 389
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L+DMY K R F +K +WT +I+ A++ + + F+++ K + D
Sbjct: 390 LIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEID 449
Query: 458 SITFLSVL 465
+ S+L
Sbjct: 450 EMILGSIL 457
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 8/215 (3%)
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAA 368
EKVFDE+ R +WN +I Y NG +A+ ++ + E P +F ++L A
Sbjct: 99 EKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 158
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWT 427
DI + G HS ++K+G S + +AL+ MY K + ++R+F+ QEK + W
Sbjct: 159 RDI--RSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 216
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
+I+S+ + G + F+EM G P+S T +S LT C G+ + S+LK
Sbjct: 217 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 276
Query: 488 YHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQI 520
S + Y C ++ M R G++ +AE ++ Q+
Sbjct: 277 S--THSSELYVCNALIAMYTRCGKMPQAERILRQM 309
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 384 IKVGLDSDPIVGSA-LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
+ V ++ P+ A +L++ GKR ++ + ++VF+E +++ FAW +I A +G+ S
Sbjct: 71 LDVSENNSPVEAFAYVLELCGKRRAVSQ-EKVFDEMPDRTAFAWNTMIGAYVSNGEPASA 129
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-DYH 489
+ + M +GV +F ++L C + I G L ++K YH
Sbjct: 130 LALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYH 177
>gi|9279602|dbj|BAB01060.1| unnamed protein product [Arabidopsis thaliana]
Length = 598
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 196/571 (34%), Positives = 325/571 (56%), Gaps = 16/571 (2%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H +K G S++YV N ++ Y ++G L A +FDEMP +DSVSWN ++SGYT G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 140 GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
+A M R G +D SF+ K +LG+Q+HG+ IK GY +V VG+
Sbjct: 83 E-DAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPN 254
L+ Y+KCE DA + F+ + + N +SW +I+ + + A L M +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 255 DV-TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
D TF L+ + + +H +K E ++CN +I+ YA S+ D+++VF
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 314 DELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAED 370
D L +++ISWN++I+G+AQ GLS AV+ FF ++ S K + Y F ++L + ++
Sbjct: 262 DGLGGSKDLISWNSMIAGFAQKGLSEDAVK-FFSYLRSSEIKVDDYAFSALLRS--CSDL 318
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK-SEFAWTAI 429
+L+ GQ+ H+ K G S+ V S+L+ MY K G I +++ F + K S AW A+
Sbjct: 319 ATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAM 378
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I A+HG + ++ F +M N+ V+ D +TF ++LT C G+I +G L + M Y
Sbjct: 379 ILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYK 438
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I+P +HY+ VD+LGR G + +A+EL+ +P P VL++ LG CR G +EM ++A
Sbjct: 439 IQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVA 498
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
+ L+++EP +YV +S++Y++ WE A ++K MK +GV+K G+SW ++ + +
Sbjct: 499 NHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIR--NQVK 556
Query: 610 GFSSGDNTHPRSEEIYRMAECLGSEMKYLNS 640
F++ D ++P ++IY M + L EM++L+S
Sbjct: 557 AFNAEDRSNPLCQDIYMMIKDLTQEMQWLDS 587
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 149/544 (27%), Positives = 259/544 (47%), Gaps = 62/544 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++ Y K G A +F+ + D VSWNT++SG+ K +DA M G D
Sbjct: 42 LDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDG 101
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++S L + F G Q+H L++K G + VYVG++L+ MY++ R+ +A F E
Sbjct: 102 YSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKE 161
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +SVSWNA+++G+ Q D L + M+ + +D +F + L
Sbjct: 162 ISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNL 221
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMISMN- 235
KQ+H +K+G +++ N ++S+Y+ C DA +VF + +++ISW +MI+
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFA 281
Query: 236 ----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
EDAV F +R + +D F L+ + S ++ G+ IH L K+ F+S
Sbjct: 282 QKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEF 341
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + LI MY++ ++ + K F ++S + ++WNA+I GYAQ+GL ++ F + +
Sbjct: 342 VISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQ 401
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ K + TF ++L A H+ +I+ GL+ LL++
Sbjct: 402 NVKLDHVTFTAILTACS-------------HTGLIQEGLE--------LLNLM------- 433
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVC 468
+ V+ +A A + L R G ++N+ KE+ E+ + PD + + L VC
Sbjct: 434 --EPVYKIQPRMEHYA--AAVDLLGRAG----LVNKAKELIESMPLNPDPMVLKTFLGVC 485
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDH--YSCMVDMLGRVGRLEE--------AEELVG 518
G I + + +L+ IEP DH Y + M + + EE E V
Sbjct: 486 RACGEIEMATQVANHLLE---IEPE-DHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVK 541
Query: 519 QIPG 522
++PG
Sbjct: 542 KVPG 545
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
+ H IK +S+ V N ++ Y +F + + +FDE+ R+ +SWN +ISGY G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 336 LSLAAVQAFFGVIKESKPNA--YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
L F +K S + Y+F +L + + + L G++ H +IK G + +
Sbjct: 81 -KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDL--GEQVHGLVIKGGYECNVY 137
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK- 452
VGS+L+DMY K + ++ F E E + +W A+I+ + D ++ ME K
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA 197
Query: 453 GVRPDSITFLSVLTV 467
V D+ TF +LT+
Sbjct: 198 AVTMDAGTFAPLLTL 212
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 210/649 (32%), Positives = 344/649 (53%), Gaps = 20/649 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++ Y K+G D AL +F+++ + D VSWN ++ G SD L + + +I +
Sbjct: 91 LDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNV 150
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T A+ C GL++H I++ G V N+L++MY+ + A +FDE
Sbjct: 151 STLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDE 209
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D +SW+ ++ GY Q G+ + L L + LD ++ S AC + ++ +
Sbjct: 210 MCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISM 269
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+ +HGV I G + VGN ++ YSKC+ A K F M RN +SW ++IS
Sbjct: 270 GRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVR 329
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+SLF M G ++VT + L+ + + + IH + I+ + V
Sbjct: 330 TEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFV 389
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ES 351
N LI Y++ + ++ + K+FD L ++ +SW+A+I+G+ G A+ F + + +
Sbjct: 390 INSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQE 449
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN T S+L A + D LK + H I+ GL ++ VG+A+LDMY K G I S
Sbjct: 450 KPNGVTILSLLEAFSVSAD--LKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLS 507
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
++ F++ EK+ +W A+I+A +G + EM+ G++P+ +T LSVL+ C
Sbjct: 508 RKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHG 567
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP----GGPGLS 527
G++ +G F++M++D+ +EP +HYSCMVDML R G+L A L+ ++P G GL
Sbjct: 568 GLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGL- 626
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+LL ACR GN +G A ++++EP S Y L S++YA G W A +R +K
Sbjct: 627 -WGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVK 685
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++GVR G+S V D F +GD +HPR+ EI+ + E L MK
Sbjct: 686 ARGVRVVAGYSLVHVE--DKAWRFVAGDESHPRAGEIWGVVEQLHDCMK 732
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 227/472 (48%), Gaps = 13/472 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G +H+ ++K G DS GN+++ Y + G L A VFD M ++DSVSWN ++ G+
Sbjct: 68 GKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLS 127
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
G + + + + + A AC +E G ++HG I+ G+ S
Sbjct: 128 RGASD-KGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPS 186
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDG 250
V N L+S Y+ ++ A ++F M +R+VISW+ MI + + A+ LF EM +
Sbjct: 187 VQNSLLSMYADNDME-RAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNA 245
Query: 251 VCPND-VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
D +T + ++ A + + GR +HG+ I + V N +I MY++ + + +
Sbjct: 246 SIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESA 305
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
K F+E+ CR +SWN++ISG + A+ F+ + K + + T ++L +
Sbjct: 306 FKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYF 365
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
D + HS +I+ G + + V ++L+D Y K I + ++F+ + K +W+A
Sbjct: 366 VDPF--QCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSA 423
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+I+ G + + F+EM +P+ +T LS+L + + + + ++
Sbjct: 424 MIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIR-R 482
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
+ + ++DM + G + + + QIP +S +++ AC ++G
Sbjct: 483 GLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVS-WGAMIAACGMNG 533
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 11/246 (4%)
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
+A S + +M+ G D T + I V+ G+ IH +K F S S N ++
Sbjct: 32 EACSRYHQMKKAGAQLTDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSVL 91
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAY 356
Y + ++ + VFD + R+ +SWN +I G+ G S + F + +PN
Sbjct: 92 DFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVS 151
Query: 357 TFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
T ++A +GA E+ G + H +II+ G P V ++LL MY + ++
Sbjct: 152 TLVLAIHACRSLGAMEE-----GLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEE 205
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRNG 472
+F+E E+ +W+ +I + G+ + + F EM N + D IT +SVL C G
Sbjct: 206 LFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTG 265
Query: 473 MIHKGR 478
I GR
Sbjct: 266 DISMGR 271
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
A + ++HG+ H+ ++K G DS G+++LD Y K G++ + VF+ + + +W
Sbjct: 59 ACSSLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSW 118
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+I G + + F++ P+ T + + C G + +G + +++
Sbjct: 119 NIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIR 178
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
++ P + ++ M +E AEEL ++
Sbjct: 179 SGFLDI-PSVQNSLLSMYAD-NDMERAEELFDEM 210
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 219/690 (31%), Positives = 346/690 (50%), Gaps = 72/690 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPD--IVSWNTVLSGFEK---SDDALSFALRMNLIGVVF 55
++ Y G A+ + D + WN+++ + ++ L M+ +
Sbjct: 66 ISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTP 125
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T+ C + G H+L + G S V+VGNAL+ MYSR L +AR+VF
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-----GLRLDHVSFTSAASACG 170
DEM D VSWN+I+ Y + G V +EM + G R D+++ + C
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVA-----LEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
LGKQ+H ++ ++ VGN L+ Y+KC + +AN VF M ++V+SW
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 231 MIS----MNR-EDAVSLFKEMRLD--------------------------GVC------- 252
M++ + R EDAV LF++M+ + GVC
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 253 --PNDVTFIGLIHAISIGNLVKEGRMIHGLCIK-------TNFLSEPSVCNCLITMYARF 303
PN+VT I ++ + + G+ IH IK E V N LI MYA+
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 304 ESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKE---SKPNAYTF 358
+ + + +FD LS R++++W +I GY+Q+G + A++ + +E ++PNA+T
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNE 417
L V A +L+ G++ H++ ++ ++ P+ V + L+DMY K GSI +++ VF+
Sbjct: 481 SCAL--VACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
K+E WT++++ HG E + F EM G + D +T L VL C +GMI +G
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
F+ M + + P P+HY+C+VD+LGR GRL A L+ ++P P V + L CR
Sbjct: 599 MEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCR 658
Query: 538 IHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGF 597
IHG VE+GE A+ + ++ GSY L+SNLYA G W+ V +R M+ KGV+K G
Sbjct: 659 IHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGC 718
Query: 598 SWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
SW V I G F GD THP ++EIY++
Sbjct: 719 SW--VEGIKGTTTFFVGDKTHPHAKEIYQV 746
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 170/353 (48%), Gaps = 13/353 (3%)
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISWTT 230
K + K IH + G T +++ + L+STY A + RR D V W +
Sbjct: 39 KTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 231 MISMNREDAVS-----LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I ++ + LF M P++ TF + A + V+ G H L + T
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F+S V N L+ MY+R S+ D+ KVFDE+S +++SWN++I YA+ G A++ F
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 346 GVIKE--SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ E +P+ T +VL + SL G++ H + + + VG+ L+DMY
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSL--GKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G + E+ VF+ K +W A+++ ++ G +E + F++M+ + ++ D +T+ +
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
++ + G+ ++ + ML I+P+ ++ VG L +E+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKEI 387
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 207/639 (32%), Positives = 357/639 (55%), Gaps = 23/639 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFD 56
++MY K+ A +F+ D V WN++LS + KS + L M++ G +
Sbjct: 224 VSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPN 283
Query: 57 AVTYSTALSFCLDHEGFLF---GLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEAR 112
+ T +AL+ C +GF + G ++H+ ++K SE+YV NALI MY+R G++ +A
Sbjct: 284 SYTIVSALTAC---DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAE 340
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
R+ +M N D V+WN+++ GY Q+ Y EA+ +M+ G + D VS TS +A G
Sbjct: 341 RILRQMNNADVVTWNSLIKGYVQNLMYK-EALEFFSDMIAAGHKSDEVSMTSIIAASGRL 399
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
NL G ++H IK G+ +++ VGN L+ YSKC +T + F RMHD+++ISWTT+I
Sbjct: 400 SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVI 459
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + +A+ LF+++ + +++ ++ A S+ + + IH ++ L
Sbjct: 460 AGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL 519
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + N L+ +Y + +M + +VF+ + ++++SW ++IS A NG AV+ F +
Sbjct: 520 -DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM 578
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ E+ +A + + AA +L G+ H ++++ G + + A++DMY G
Sbjct: 579 V-ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 637
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ VF+ + K +T++I+A HG ++ + F +M ++ V PD I+FL++L
Sbjct: 638 LQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 697
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ +GR M +Y +EP P+HY C+VDMLGR + EA E V + P
Sbjct: 698 CSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAE 757
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V +LL ACR H E+GE A L+++EP G+ VL+SN++AE+G W V +R MK
Sbjct: 758 VWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMK 817
Query: 588 SKGVRKEVGFSWADVGDIDG-LHGFSSGDNTHPRSEEIY 625
+ G+ K G SW ++DG +H F++ D +HP S+EIY
Sbjct: 818 ASGMEKHPGCSWI---EMDGKVHKFTARDKSHPESKEIY 853
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 291/582 (50%), Gaps = 22/582 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVT 59
MY K G D A +F+ + + +WNT++ + + + AL+ M + GV +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ L C G +LHSL+VK G S ++ NAL++MY++ L ARR+FD
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 120 NK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K D+V WN+ILS Y+ G +E + EM G + + SA +AC +LG
Sbjct: 245 EKGDAVLWNSILSSYSTSGK-SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303
Query: 179 KQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
K+IH +K + + + V N L++ Y++C A ++ R+M++ +V++W ++I
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ ++A+ F +M G ++V+ +I A + NL+ G +H IK + S
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLA-GMELHAYVIKHGWDSNLQ 422
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI MY++ + F + +++ISW +I+GYAQN + A++ F V K+
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + GS+L A + + + + H HI++ GL D ++ + L+D+YGK ++
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIV--KEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGY 539
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ RVF + K +WT++IS+ A +G+ + F+ M G+ DS+ L +L+
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 471 NGMIHKGRHLFDSML-KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
++KGR + +L K + +E S +VDM G L+ A+ + +I GL
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIE-RKGLLQY 656
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
S++ A +HG + + D M+ E ++ LYA
Sbjct: 657 TSMINAYGMHGCGKAAVELFDK-MRHENVSPDHISFLALLYA 697
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 214/420 (50%), Gaps = 20/420 (4%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVK----FGLDSEVYVGNALITMYSRWGRLVEARRV 114
++ L C G QLHS I K F LD ++ L+ MY + G L +A +V
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD---FLAGKLVFMYGKCGSLDDAEKV 138
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEK 173
FDEMP++ + +WN ++ Y +G+ + LAL MR +G+ L SF + AC +
Sbjct: 139 FDEMPDRTAFAWNTMIGAYVSNGEPA--SALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMI 232
++ G ++H + +K+GY + + N L+S Y+K + A ++F ++ + + W +++
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN-F 286
S + + LF+EM + G PN T + + A + K G+ IH +K++
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
SE VCN LI MY R M +E++ +++ ++++WN+LI GY QN + A++ F
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+I K + + S++ A G + L G H+++IK G DS+ VG+ L+DMY K
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSN--LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 434
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
R F +K +WT +I+ A++ + + F+++ K + D + S+L
Sbjct: 435 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 494
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 130/260 (50%), Gaps = 19/260 (7%)
Query: 271 VKEGRMIHGLCIKT------NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
V +GR +H KT +FL+ L+ MY + S+ D+EKVFDE+ R +W
Sbjct: 96 VSQGRQLHSRIFKTFPSFELDFLAGK-----LVFMYGKCGSLDDAEKVFDEMPDRTAFAW 150
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
N +I Y NG +A+ ++ + E P +F ++L A DI + G HS +
Sbjct: 151 NTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDI--RSGSELHSLL 208
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYESV 442
+K+G S + +AL+ MY K + ++R+F+ QEK + W +I+S+ + G
Sbjct: 209 VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLET 268
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--M 500
+ F+EM G P+S T +S LT C G+ + S+LK S + Y C +
Sbjct: 269 LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS--THSSELYVCNAL 326
Query: 501 VDMLGRVGRLEEAEELVGQI 520
+ M R G++ +AE ++ Q+
Sbjct: 327 IAMYTRCGKMPQAERILRQM 346
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV--GLDSDPIVGSALLDMYGKR 405
+ E+ F VL G +S G++ HS I K + D + G L+ MYGK
Sbjct: 73 VSENNSPVEAFAYVLELCGKRRAVS--QGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKC 129
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GS+ ++++VF+E +++ FAW +I A +G+ S + + M +GV +F ++L
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 466 TVCGRNGMIHKGRHLFDSMLK-DYH 489
C + I G L ++K YH
Sbjct: 190 KACAKLRDIRSGSELHSLLVKLGYH 214
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 203/639 (31%), Positives = 346/639 (54%), Gaps = 28/639 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
+ SG + AL +F+ +N D WN ++ GF +AL RM GV D+ TY
Sbjct: 70 FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ G ++H++++K S+VYV N+LI++Y + G +A +VF+EMP
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D VSWN+++SGY D G +++ EM++ G + D S SA AC H + +GK+
Sbjct: 190 RDIVSWNSMISGYLALED-GFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKE 248
Query: 181 IHGVSIKMGYGTHVSVGNVLMST-----YSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
+H +++ + + G+V++ T YSK A ++F+ + RN+++W +I
Sbjct: 249 LHCHAVR----SRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCY 304
Query: 233 --SMNREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ DA F++M +G+ P+ +T I L+ A +I EGR IHG ++ FL
Sbjct: 305 ARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAI----LEGRTIHGYAMRRGFLPH 360
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ LI MY + ++ +E +FD ++ + +ISWN++I+ Y QNG + +A++ F +
Sbjct: 361 IVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWD 420
Query: 350 ESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S P++ T S+L A AE +SL G++ H++I+K S+ I+ ++L+ MY G +
Sbjct: 421 SSLLPDSTTIASILPAY--AESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDL 478
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++++ FN K +W +II A A HG + F EM V P+ TF S+L C
Sbjct: 479 EDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAAC 538
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+GM+ +G F+SM ++Y I+P +HY M+D++GR G A+ + ++P P +
Sbjct: 539 SISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARI 598
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
SLL A R H ++ + E A+ + KME +G YVL+ N+YAE WE V ++ M+S
Sbjct: 599 WGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMES 658
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
KG+ + S + V H ++GD +H + +IY +
Sbjct: 659 KGISRTS--SRSTVEAKSKTHVLTNGDRSHVETNKIYEV 695
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 223/450 (49%), Gaps = 18/450 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLIGVVFDAVT 59
+++Y K G A +F + DIVSWN+++SG+ +D S L ++ F
Sbjct: 168 ISLYMKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDR 227
Query: 60 YST--ALSFCLDHEGFLFGLQLHSLIVKFGLDS-EVYVGNALITMYSRWGRLVEARRVFD 116
+ST AL C G +LH V+ +++ +V V +++ MYS++G + A R+F
Sbjct: 228 FSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFK 287
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNL 175
+ ++ V+WN ++ Y ++ +A L +M + GL+ D ++ + AC +
Sbjct: 288 CIIQRNIVAWNVLIGCYARNSRV-TDAFLCFQKMSEQNGLQPDVITLINLLPACA----I 342
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G+ IHG +++ G+ H+ + L+ Y + A +F R+ ++N+ISW ++I+
Sbjct: 343 LEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAY 402
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++ A+ LF+++ + P+ T ++ A + + EGR IH +K+ + S
Sbjct: 403 VQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNT 462
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-K 349
+ N L+ MYA ++D+ K F+ + ++++SWN++I YA +G +V F +I
Sbjct: 463 IILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIAS 522
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ PN TF S+L A + + + + S + G+D +LD+ G+ G+
Sbjct: 523 KVDPNKSTFASLLAACSISGMVD-EGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFS 581
Query: 410 ESQRVFNETQ-EKSEFAWTAIISALARHGD 438
++R E + W ++++A H D
Sbjct: 582 SAKRFIREMPFLPTARIWGSLLNASRNHND 611
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 195/545 (35%), Positives = 313/545 (57%), Gaps = 12/545 (2%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
+S C G+QLHS I+K G DS VY+ +AL+ MY + G + A+R+FDEMP+++
Sbjct: 86 VSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNV 145
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
V+WN+++SGY G + AI +EM++ G+ S ++ C ++ +LG Q+HG
Sbjct: 146 VTWNSLISGYLHVGCPEI-AIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHG 204
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNRED 238
+S+K G+ ++ VG L+ YSK + +F M +RN+I+WT+M++
Sbjct: 205 LSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVA 264
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
A+ L ++M+ G+ N VT+ L+ + S N + + +H I+ S + L+T
Sbjct: 265 AMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVT 324
Query: 299 MYARFES--MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
+Y+ S ++D KV ++ + ISWNA+I G + G AA++ F + + +
Sbjct: 325 VYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDL 384
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+TF SVL A+G +L G++ H+ ++K G S+ V + L+ MY + GSI +++RVF
Sbjct: 385 FTFTSVLRAIGMIS--TLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVF 442
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ +W +++S A HG + F++M GV+PD+ TFL VL+ C G++
Sbjct: 443 SLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACRHVGLLD 502
Query: 476 KGRHLFDSMLKDYHIE-PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
KG FD M DY +E P+ +HYS MVD+ R G L EAE+ + +P PG SV ++LL
Sbjct: 503 KGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLS 562
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
AC++HGNVE+ R A L++M P YVL+SN+ A G W+ VA +RK M +GVRKE
Sbjct: 563 ACQVHGNVEIAVRCAKKLLQMCPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKE 622
Query: 595 VGFSW 599
G+SW
Sbjct: 623 PGYSW 627
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 239/474 (50%), Gaps = 39/474 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G A +F+ + + ++V+WN+++SG+ + A+ L M +G+
Sbjct: 121 VDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTP 180
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S L C E G+Q+H L +K G + VG LI +YS+ + +R +FD
Sbjct: 181 FSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDL 240
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ ++W ++++GY V A++ + +M R G+RL++V++ S+ +L+
Sbjct: 241 MPERNIITWTSMVAGYAH-CQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDH 299
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG--DANKVFRRMHDRNVISWTTMIS-- 233
KQ+H I+ G ++ + L++ YS+C + D NKV + + ISW +I
Sbjct: 300 CKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGL 359
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
N E A+ F +MR G+ + TF ++ AI + + + EG+ IH L +K + S
Sbjct: 360 SNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNL 419
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+V N L++MYAR S+ D+++VF + ++ISWN+L+SG A +G AV+ F + +
Sbjct: 420 NVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRS 479
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD-----------SDPIVG--S 396
KP+ TF VL+A H ++ GL+ P S
Sbjct: 480 GVKPDNTTFLVVLSACR-------------HVGLLDKGLEYFDLMRNDYSLESPTTEHYS 526
Query: 397 ALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEM 449
+++D++ + G + E++ N E + A++SA HG+ E + K++
Sbjct: 527 SMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVRCAKKL 580
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 116/228 (50%), Gaps = 3/228 (1%)
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ L +++ G P ++ + + V G +H IK F S +C+ L+ M
Sbjct: 64 LKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDM 123
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
Y + ++ ++++FDE+ R +++WN+LISGY G A++ F ++K P ++
Sbjct: 124 YGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSV 183
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
+VL ED L G + H +K G + +VG+ L+D+Y K +I S+ +F+
Sbjct: 184 SAVLVGCWRMEDTKL--GIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLM 241
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
E++ WT++++ A + M ++M+ G+R + +T+ +L+
Sbjct: 242 PERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLS 289
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 210/644 (32%), Positives = 357/644 (55%), Gaps = 24/644 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTV-----LSGFEKSDDALSFALRMNLI--GV 53
+ Y G F A+ +F+ + D VSWNTV L GF ++AL F M G+
Sbjct: 179 LAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGF--YEEALGFFRVMVAAKPGI 236
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEAR 112
D VT + L C + E + +H +K GL V VGNAL+ +Y + G ++
Sbjct: 237 QPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASK 296
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+VFDE+ ++ +SWNAI++ ++ G Y ++A+ M+ +G+R + V+ +S G
Sbjct: 297 KVFDEIDERNVISWNAIITSFSFRGKY-MDALDVFRLMIDEGMRPNSVTISSMLPVLGEL 355
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+LG ++HG S+KM + V + N L+ Y+K + A+ +F +M RN++SW MI
Sbjct: 356 GLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMI 415
Query: 233 S---MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ NR +AV L ++M+ G PN+VTF ++ A + + G+ IH I+
Sbjct: 416 ANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSS 475
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ V N L MY++ + ++ VF+ +S R+ +S+N LI GY++ SL +++ F +
Sbjct: 476 LDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEM 534
Query: 348 -IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ +P+ +F V++A A ++ G+ H +++ + V ++LLD+Y + G
Sbjct: 535 RLLGMRPDIVSFMGVVSA--CANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCG 592
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I + +VF Q K +W +I G+ ++ +N F+ M+ GV DS++F++VL+
Sbjct: 593 RIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLS 652
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G+I KGR F M+ D +IEP+ HY+CMVD+LGR G +EEA +L+ + P
Sbjct: 653 ACSHGGLIEKGRKYF-KMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDT 711
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
++ +LLGACRIHGN+E+G A+ L +++P G Y+L+SN+YAE W+ +R+ M
Sbjct: 712 NIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELM 771
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAEC 630
KS+G +K G SW VGD+ +H F G+ ++ + +++C
Sbjct: 772 KSRGAKKNPGCSWVQVGDL--VHAFLVGEKIDSLDDDFW-VSDC 812
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 252/502 (50%), Gaps = 20/502 (3%)
Query: 28 WNTVLSGFEKSDDALSFALRMNLI--GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVK 85
WNT++ + F ++ GV D TY L C D G ++H + K
Sbjct: 106 WNTLIRANSIAGVFDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFK 165
Query: 86 FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
G D +V+VGN L+ Y G +A +VFDEMP +D VSWN ++ + G Y E L
Sbjct: 166 LGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFY--EEAL 223
Query: 146 ALIEMM---RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG-YGTHVSVGNVLM 201
+M + G++ D V+ S C ++ + + +H ++K+G G HV VGN L+
Sbjct: 224 GFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALV 283
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDV 256
Y KC + KVF + +RNVISW +I+ DA+ +F+ M +G+ PN V
Sbjct: 284 DVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSV 343
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T ++ + L K G +HG +K S+ + N LI MYA+ S + + +F+++
Sbjct: 344 TISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKM 403
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKH 375
R I+SWNA+I+ +A+N L AV+ + K PN TF +VL A A L
Sbjct: 404 GVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPA--CARLGFLNV 461
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G+ H+ II+VG D V +AL DMY K G + +Q VFN + E ++ +I +R
Sbjct: 462 GKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSR 520
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD-YHIEPSP 494
D + F EM G+RPD ++F+ V++ C I +G+ + +++ +H
Sbjct: 521 TNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFV 580
Query: 495 DHYSCMVDMLGRVGRLEEAEEL 516
+ ++D+ R GR++ A ++
Sbjct: 581 AN--SLLDLYTRCGRIDLATKV 600
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 214/694 (30%), Positives = 362/694 (52%), Gaps = 80/694 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVF-D 56
+N Y K G+ A+ +F + D+ SWNT++SG+ +S +L L M+ G + +
Sbjct: 78 LNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPN 137
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF- 115
A T + A+ C LQL +++ KF + V AL+ M+ R G + A R+F
Sbjct: 138 AFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFV 197
Query: 116 ------------------------------DEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
D MP +D VSWN ++S +Q G EA+
Sbjct: 198 RIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVR-EALD 256
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
+++M KG+RLD ++TS+ +AC +L GKQ+H I+ V + L+ Y+
Sbjct: 257 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYA 316
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIG 260
K +A VF +HDRN ++WT +IS + ++V LF +MR + + +
Sbjct: 317 KSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALAT 376
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
LI + GR +H LC+K+ + V N LI+MYA+ +++Q +E +F ++ ++
Sbjct: 377 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKD 436
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAV---GAAED------- 370
I+SW ++I+ Y+Q G ++A + FF + E N T+ ++L A GA ED
Sbjct: 437 IVSWTSMITAYSQVG-NVAKAREFFDGMSEK--NVITWNAMLGAYIQHGAEEDGLRMYKV 493
Query: 371 --------------ISL----------KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++L K G + +KVGL D V +A++ MY K G
Sbjct: 494 MLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCG 553
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I E+++VF+ K +W A+I+ ++HG + + F ++ +G +PD I++++VL+
Sbjct: 554 RILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G++ +G+ FD M + ++I P +H+SCMVD+LGR G L EA++L+ +P P
Sbjct: 614 GCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTA 673
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +LL AC+IHGN E+ E A + +++ SGSY+LM+ +YA+ G + A +RK M
Sbjct: 674 EVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLM 733
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPR 620
+ KG++K G+SW +V + +H F + D +HP+
Sbjct: 734 RDKGIKKNPGYSWMEVD--NKVHVFKADDVSHPQ 765
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 209/466 (44%), Gaps = 45/466 (9%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
V N ++ Y++ GRL +A +F MP +D SWN ++SGY Q Y V ++ + M
Sbjct: 71 VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLV-SLETFLSMH 129
Query: 152 RKGLRLDHV-SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
R G + + A +CG L Q+ + K V L+ + +C
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 189
Query: 211 GDANKVFRR-------------------------------MHDRNVISWTTMISMNRE-- 237
A+++F R M +R+V+SW M+S +
Sbjct: 190 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+ + +M+ GV + T+ + A + + ++ G+ +H I+ +P V +
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVAS 309
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP- 353
L+ +YA+ ++++ VF+ L R ++W LISG+ Q G +V+ F + E
Sbjct: 310 ALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTL 369
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ + ++++ + D+ L G++ HS +K G +V ++L+ MY K ++ ++
Sbjct: 370 DQFALATLISGCCSRMDLCL--GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEA 427
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F EK +WT++I+A ++ G+ F M K V IT+ ++L ++G
Sbjct: 428 IFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGA 483
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
G ++ ML + ++ P Y + +G + ++++G+
Sbjct: 484 EEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGR 529
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 137/289 (47%), Gaps = 43/289 (14%)
Query: 261 LIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
L+HA +S G L R++ N ++ N ++ YA+ + D+ ++F + R
Sbjct: 45 LLHAYLSCGALSDARRLLLMDIAHPNVITH----NVMLNGYAKLGRLSDAVELFGRMPAR 100
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQ 377
++ SWN L+SGY Q+ L +++ F + + +S PNA+T + + GA SL
Sbjct: 101 DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSL--AL 158
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF------------- 424
+ + + K D V +AL+DM+ + G++ + R+F +E + F
Sbjct: 159 QLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTY 218
Query: 425 ------------------AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+W ++SAL++ G ++ +M++KGVR DS T+ S LT
Sbjct: 219 GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLT 278
Query: 467 VCGRNGMIHKGRHLFDSMLKDY-HIEPSPDHYSCMVDMLGRVGRLEEAE 514
C R + G+ L ++++ HI+P S +V++ + G +EA+
Sbjct: 279 ACARLSSLRWGKQLHAQVIRNLPHIDPYV--ASALVELYAKSGCFKEAK 325
>gi|357516795|ref|XP_003628686.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355522708|gb|AET03162.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 699
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 205/641 (31%), Positives = 347/641 (54%), Gaps = 32/641 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+ Y K Q AL +F+ + D VSWN V+SG+ + D S +N + G FD
Sbjct: 41 ITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADLDSTWQLLNAMRVSGHAFDN 100
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L + G QLHS+++K L+ V+ G+AL+ MY++ GR+ +A VF
Sbjct: 101 HTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVDDALVVFRY 160
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP + VSWN +++GY++ GD + L + + +G+ +D + + + + L
Sbjct: 161 MPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQEL-EGVGIDDGTVSPLLTLLDGVRFYSL 219
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR---RMHDRNVISWTTMIS- 233
Q+H +K G V N +++ YS+C DA +VF + R++++W +M++
Sbjct: 220 VMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAA 279
Query: 234 --MNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+++++ A +F EM+ G P+D ++ G+I SI G +HGL IK
Sbjct: 280 YLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGESLHGLVIKRGAEVS 339
Query: 290 PSVCNCLITMYARFES--MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
V N LI MY F++ M+D+ ++F + ++ +WN++++GY Q G S A++ F V
Sbjct: 340 VPVSNALIAMYLGFDNRCMEDALRIFFSMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQV 399
Query: 348 IKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ + YTF +V+ ++ +L+ GQ+ H +KVG D++ VG
Sbjct: 400 RSLFVEIDDYTFSAVIRC--CSDLATLQLGQQVHVLSLKVGFDTNKYVGK---------- 447
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
++++ F T + W +II A+HG + F M K V+PD ITF++VLT
Sbjct: 448 ---DAKKCFETTSNDNAIIWNSIIFGYAQHGQGNIALELFYLMREKKVKPDHITFVAVLT 504
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C NG++ +GR + SM D+ I +HY+C VD+ GR G LEE + LV +P P
Sbjct: 505 ACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACAVDLYGRAGYLEEGKALVETMPFEPDA 564
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
VL++LLGACR GN+E+ +A L+ +EP +YVL+S+LY W+ A + + M
Sbjct: 565 MVLRTLLGACRSCGNIELASHVAKMLLVLEPEDHSTYVLLSDLYGRLKMWDEKASVTRLM 624
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
+ +GV+K G+SW +V + +H F++ D++HP+S+EIY +
Sbjct: 625 RERGVKKVPGWSWIEVK--NKVHAFNAEDHSHPQSKEIYEL 663
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 211/420 (50%), Gaps = 30/420 (7%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H L +K G S++Y N LIT YS+ +L A ++FD+MP +D+VSWNA++SGY D
Sbjct: 22 HCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTAD- 80
Query: 140 GVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+++ L+ MR G D+ +F S + LELG+Q+H V IKM +V G+
Sbjct: 81 -LDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGS 139
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCP 253
L+ Y+KC DA VFR M + N +SW T+I+ + + A L + L+GV
Sbjct: 140 ALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGI 199
Query: 254 NDVT---FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
+D T + L+ + +LV + +H +K + VCN +IT Y+ S+QD+E
Sbjct: 200 DDGTVSPLLTLLDGVRFYSLVMQ---LHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAE 256
Query: 311 KVF---DELSCREIISWNALISGYAQNGLSLAAVQAF-----FGVIKESKPNAYTFGSVL 362
+VF ++CR++++WN++++ Y + A F FG +P+ Y++ V+
Sbjct: 257 RVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGF----EPDDYSYTGVI 312
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY-GKRGSIFE-SQRVFNETQE 420
+ E S G+ H +IK G + V +AL+ MY G E + R+F
Sbjct: 313 SGCSIKEHKS--RGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRCMEDALRIFFSMDV 370
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
K W ++++ + G E + F ++ + V D TF +V+ C + G+ +
Sbjct: 371 KDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQV 430
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L+++ I+L + Q H IK G SD + L+ Y K + + ++F++ ++
Sbjct: 4 LHSLIRTSHITLPYLQATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQR 63
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+W A+IS D +S M G D+ TF S L R + G+ L
Sbjct: 64 DTVSWNAVISGYVNTADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLH 123
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
M+K + + S ++DM + GR+++A + +P +S + G R+ G+
Sbjct: 124 SVMIK-MRLNENVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRV-GD 181
Query: 542 VEMG 545
++M
Sbjct: 182 LDMA 185
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 218/716 (30%), Positives = 370/716 (51%), Gaps = 80/716 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVF-D 56
+N Y K G+ A+ +F + D+ SWNT++SG+ +S +L L M+ G + +
Sbjct: 98 LNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPN 157
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF- 115
A T + A+ C LQL +++ KF + V AL+ M+ R G + A R+F
Sbjct: 158 AFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFV 217
Query: 116 ------------------------------DEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
D MP +D VSWN ++S +Q G EA+
Sbjct: 218 RIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVR-EALD 276
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
+++M KG+RLD ++TS+ +AC +L GKQ+H I+ V + L+ Y+
Sbjct: 277 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYA 336
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIG 260
K +A VF +HDRN ++WT +IS + ++V LF +MR + + +
Sbjct: 337 KSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALAT 396
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
LI + GR +H LC+K+ + V N LI+MYA+ +++Q +E +F ++ ++
Sbjct: 397 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKD 456
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAV---GAAED------- 370
I+SW ++I+ Y+Q G ++A + FF + E N T+ ++L A GA ED
Sbjct: 457 IVSWTSMITAYSQVG-NVAKAREFFDGMSEK--NVITWNAMLGAYIQHGAEEDGLRMYKV 513
Query: 371 --------------ISL----------KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++L K G + +KVGL D V +A++ MY K G
Sbjct: 514 MLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCG 573
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I E+++VF+ K +W A+I+ ++HG + + F ++ +G +PD I++++VL+
Sbjct: 574 RILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 633
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G++ +G+ FD M + ++I P +H+SCMVD+LGR G L EA++L+ +P P
Sbjct: 634 GCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTA 693
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +LL AC+IHGN E+ E A + +++ SGSY+LM+ +YA+ G + A +RK M
Sbjct: 694 EVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLM 753
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKR 642
+ KG++K G+SW +V + +H F + D +HP+ I + + L ++ L R
Sbjct: 754 RDKGIKKNPGYSWMEVD--NKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVR 807
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 209/466 (44%), Gaps = 45/466 (9%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
V N ++ Y++ GRL +A +F MP +D SWN ++SGY Q Y V ++ + M
Sbjct: 91 VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLV-SLETFLSMH 149
Query: 152 RKGLRLDHV-SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
R G + + A +CG L Q+ + K V L+ + +C
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 209
Query: 211 GDANKVFRR-------------------------------MHDRNVISWTTMISMNRE-- 237
A+++F R M +R+V+SW M+S +
Sbjct: 210 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 269
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+ + +M+ GV + T+ + A + + ++ G+ +H I+ +P V +
Sbjct: 270 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVAS 329
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP- 353
L+ +YA+ ++++ VF+ L R ++W LISG+ Q G +V+ F + E
Sbjct: 330 ALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTL 389
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ + ++++ + D+ L G++ HS +K G +V ++L+ MY K ++ ++
Sbjct: 390 DQFALATLISGCCSRMDLCL--GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEA 447
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F EK +WT++I+A ++ G+ F M K V IT+ ++L ++G
Sbjct: 448 IFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGA 503
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
G ++ ML + ++ P Y + +G + ++++G+
Sbjct: 504 EEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGR 549
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 137/289 (47%), Gaps = 43/289 (14%)
Query: 261 LIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
L+HA +S G L R++ N ++ N ++ YA+ + D+ ++F + R
Sbjct: 65 LLHAYLSCGALSDARRLLLMDIAHPNVITH----NVMLNGYAKLGRLSDAVELFGRMPAR 120
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQ 377
++ SWN L+SGY Q+ L +++ F + + +S PNA+T + + GA SL
Sbjct: 121 DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSL--AL 178
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF------------- 424
+ + + K D V +AL+DM+ + G++ + R+F +E + F
Sbjct: 179 QLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTY 238
Query: 425 ------------------AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+W ++SAL++ G ++ +M++KGVR DS T+ S LT
Sbjct: 239 GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLT 298
Query: 467 VCGRNGMIHKGRHLFDSMLKDY-HIEPSPDHYSCMVDMLGRVGRLEEAE 514
C R + G+ L ++++ HI+P S +V++ + G +EA+
Sbjct: 299 ACARLSSLRWGKQLHAQVIRNLPHIDPYV--ASALVELYAKSGCFKEAK 345
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 199/618 (32%), Positives = 337/618 (54%), Gaps = 19/618 (3%)
Query: 24 DIVSWNTVLSGFEKSDDAL-SFALRMNLIG--VVFDAVTYSTALSFCLDHEGFLFGLQLH 80
D++ WN LS F + +A + +++I V D +T+ L+ G Q+H
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
++++ GLD V VGN LI MY + G + AR VF +M D +SWN ++SG T G
Sbjct: 959 GIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEE 1018
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGH-EKNLELGKQIHGVSIKMGYGTHVSVGNV 199
++ + ++R L D + S AC E L QIH ++K G V
Sbjct: 1019 C-SVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTA 1077
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTM-----ISMNREDAVSLFKEMRLDGVCPN 254
L+ YSK +A +F ++ SW + +S + A+ L+ M+ G +
Sbjct: 1078 LIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSD 1137
Query: 255 DVTFIGLIHAISIGNLV--KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
+T + A + G LV K+G+ IH + +K F + V + ++ MY + M+ + +V
Sbjct: 1138 QITLVNA--AKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRV 1195
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDI 371
F E+ + ++W +ISG +NG A+ + + + + +P+ YTF +++ A
Sbjct: 1196 FSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLL--T 1253
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
+L+ G++ H++I+K+ DP V ++L+DMY K G+I +++ +F T + +W A+I
Sbjct: 1254 ALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIV 1313
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
LA+HG+ + + FK M+++GV PD +TF+ VL+ C +G++ + F SM K+Y IE
Sbjct: 1314 GLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIE 1373
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
P +HYSC+VD L R GR+EEAE+++ +P S+ ++LL ACR+ + E G+R+A+
Sbjct: 1374 PEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEK 1433
Query: 552 LMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGF 611
L+ +EP+ S +YVL+SN+YA WE VA R M+ V+K+ GFSW D+ + +H F
Sbjct: 1434 LLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLK--NKVHLF 1491
Query: 612 SSGDNTHPRSEEIYRMAE 629
+GD +H ++ IY E
Sbjct: 1492 VAGDRSHEETDVIYNKVE 1509
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 150/561 (26%), Positives = 256/561 (45%), Gaps = 55/561 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNL--NNPDIVSWNTVLSGF----EKSDDALSF--ALRMNLIG 52
+ MY K G A +F+ N D+V+WN +LS +KS D LR +++
Sbjct: 698 ITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVS 757
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
T + CL LH VK GL +V+V AL+ +Y+++G + EAR
Sbjct: 758 TTRH--TLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREAR 815
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+FD M +D V WN ++ Y D EA+L E R G R D V+ + + +
Sbjct: 816 VLFDGMAVRDVVLWNVMMKAYV-DTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCK 874
Query: 173 KNLELGKQIHGVSIKM----GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
KN+ KQ + K+ G+ V V N +S + + G+A W
Sbjct: 875 KNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQ---RGEA--------------W 917
Query: 229 TTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+AV F +M V + +TF+ ++ ++ N ++ G+ IHG+ +++
Sbjct: 918 ---------EAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQ 968
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
SV NCLI MY + S+ + VF +++ ++ISWN +ISG +GL +V F ++
Sbjct: 969 VVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLL 1028
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
++S P+ +T SVL A + E + H+ +K G+ D V +AL+D+Y KRG
Sbjct: 1029 RDSLLPDQFTVASVLRACSSLEG-GYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGK 1087
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ E++ +F +W AI+ GD+ + + M+ G R D IT ++
Sbjct: 1088 MEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKA 1147
Query: 468 CGRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
G + +G+ + ++K D + S ++DM + G +E A + +IP
Sbjct: 1148 AGGLVGLKQGKQIHAVVVKRGFNLDLFVT------SGVLDMYLKCGEMESARRVFSEIP- 1200
Query: 523 GPGLSVLQSLLGACRIHGNVE 543
P +++ C +G E
Sbjct: 1201 SPDDVAWTTMISGCVENGQEE 1221
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 192/461 (41%), Gaps = 59/461 (12%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP--NKDSVSWNAILSG 132
G + H+ I+ G + +V N LITMY++ G L AR++FD P N+D V+WNAILS
Sbjct: 674 LGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSA 733
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
D + + R + + C + + +HG ++K+G
Sbjct: 734 LAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQW 793
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMR 247
V V L++ Y+K + +A +F M R+V+ W M+ + +A+ LF E
Sbjct: 794 DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFH 853
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
G P+DVT L + C I +F++
Sbjct: 854 RTGFRPDDVTLRTLSRVVK--------------------------CKKNILELKQFKAYA 887
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVG 366
++D+ ++I WN +S + Q G + AV F +I + TF +L V
Sbjct: 888 TKLFMYDD-DGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVA 946
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
+ L G++ H +++ GLD VG+ L++MY K GS+ ++ VF + E +W
Sbjct: 947 GLNCLEL--GKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISW 1004
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR-------NGMIH---- 475
+IS G E + F + + PD T SVL C IH
Sbjct: 1005 NTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAM 1064
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
K + DS + + ++D+ + G++EEAE L
Sbjct: 1065 KAGVVLDSFVS-----------TALIDVYSKRGKMEEAEFL 1094
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 145/356 (40%), Gaps = 39/356 (10%)
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD--RNVISWTTM 231
+L LGK+ H + G+ V N L++ Y+KC A K+F D R++++W +
Sbjct: 671 DLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAI 730
Query: 232 ISM------NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+S D LF+ +R V T + + +HG +K
Sbjct: 731 LSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIG 790
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ V L+ +YA+F ++++ +FD ++ R+++ WN ++ Y L A+ F
Sbjct: 791 LQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFS 850
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ +P+ T ++ V +C +I+++ K
Sbjct: 851 EFHRTGFRPDDVTLRTLSRVV------------KCKKNILEL-----------------K 881
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
+ + ++ + W +S + G+ ++ F +M N V D +TF+ +
Sbjct: 882 QFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVM 941
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
LTV + G+ + +++ ++ +C+++M + G + A + GQ+
Sbjct: 942 LTVVAGLNCLELGKQIHGIVMRS-GLDQVVSVGNCLINMYVKAGSVSRARSVFGQM 996
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G + A +F N I SWN ++ G + + +AL F M GV+ D
Sbjct: 1281 VDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDR 1340
Query: 58 VTYSTALSFCLDHEGFLFGL--QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT+ LS C H G + +S+ +G++ E+ + L+ SR GR+ EA +V
Sbjct: 1341 VTFIGVLSAC-SHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVI 1399
Query: 116 DEMPNKDSVS 125
MP + S S
Sbjct: 1400 SSMPFEASAS 1409
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
S+L AA D+SL G+R H+ I+ G D V + L+ MY K GS+ ++++F+ T
Sbjct: 661 SILRQAIAASDLSL--GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTP 718
Query: 420 EKSE--FAWTAIISALARHGD 438
+ + W AI+SALA H D
Sbjct: 719 DTNRDLVTWNAILSALAAHAD 739
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 346/646 (53%), Gaps = 15/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIG---VVFDA 57
+ +Y G A +F+ + P+ N +++GF ++ + ++G + ++
Sbjct: 86 IRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINS 145
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T AL C D G+++ V+ G +YVG++++ + G L +A++VFD
Sbjct: 146 YTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDG 205
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP KD V WN+I+ GY Q G + E+I +EM+ GLR V+ + ACG ++
Sbjct: 206 MPEKDVVCWNSIIGGYVQKGLFW-ESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKV 264
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G H + +G G V V L+ YS TG A VF M R++ISW MIS +
Sbjct: 265 GMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQ 324
Query: 238 DAV-----SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + +LF+ + G + T + LI S + ++ GR++H I+ S +
Sbjct: 325 NGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVL 384
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
++ MY++ +++ + VF + + +I+W A++ G +QNG + A++ F + +E
Sbjct: 385 STAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKV 444
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
N+ T S+++ A SL G+ H+H I+ G D ++ SAL+DMY K G I +
Sbjct: 445 AANSVTLVSLVHC--CAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSA 502
Query: 412 QRVFN-ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+++FN E K ++I HG + + M + ++P+ TF+S+LT C
Sbjct: 503 EKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSH 562
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G++ +G+ LF SM +D+ + P HY+C+VD+ R GRLEEA+ELV Q+P P VL+
Sbjct: 563 SGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLE 622
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL CR H N MG +IAD L+ ++ SG YV++SN+YAE WE V +R M+ +G
Sbjct: 623 ALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQG 682
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++K G+S +VG + ++ F + D++HP +IY++ E L E++
Sbjct: 683 MKKIPGYSLIEVG--NKVYTFFASDDSHPSWADIYQLLENLRLEVE 726
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 153/608 (25%), Positives = 283/608 (46%), Gaps = 67/608 (11%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H+ I+K + +E ++ LI +YS G L AR VFD+ ++ NA+++G+ ++
Sbjct: 66 IHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQ 125
Query: 139 YGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ + L MM + ++ + A AC + E+G +I +++ G+ H+ VG
Sbjct: 126 H--MEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVC 252
+ +++ K DA KVF M +++V+ W ++I + +++ +F EM G+
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ VT L+ A L K G H + ++ V L+ MY+ + V
Sbjct: 244 PSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALV 303
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAV-GAAEDI 371
FD + R +ISWNA+ISGY QNG+ + F +++ + + G++++ + G ++
Sbjct: 304 FDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSG--SGFDSGTLVSLIRGCSQTS 361
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
L++G+ HS II+ L+S ++ +A++DMY K G+I ++ VF +K+ WTA++
Sbjct: 362 DLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLV 421
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD-YHI 490
L+++G E + F +M+ + V +S+T +S++ C G + KGR + ++ Y
Sbjct: 422 GLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAF 481
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELV------------------------GQIPGG--- 523
+ S ++DM + G++ AE+L G+ G
Sbjct: 482 DAVIT--SALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYS 539
Query: 524 --------PGLSVLQSLLGACRIHGNVEMGERIADALMK---MEPAGSGSYVLMSNLYAE 572
P + SLL AC G VE G+ + ++ + + P Y + +L++
Sbjct: 540 RMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHK-HYACLVDLHSR 598
Query: 573 KGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLG 632
G E L K M + D L SG TH + ++A+ L
Sbjct: 599 AGRLEEADELVKQMPFQ-------------PSTDVLEALLSGCRTHKNTNMGIQIADRLI 645
Query: 633 SEMKYLNS 640
S + YLNS
Sbjct: 646 S-LDYLNS 652
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 161/349 (46%), Gaps = 11/349 (3%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNR 236
K IH IK T + L+ YS G A VF + MI+ +
Sbjct: 64 KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKE--GRMIHGLCIKTNFLSEPSVC 293
+ + + + R+ G C ++ + A+ + +L+ + G I ++ F V
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
+ ++ + + D++KVFD + ++++ WN++I GY Q GL ++Q F +I +
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P+ T ++L A G + LK C HS+++ +G+ +D V ++L+DMY G +
Sbjct: 244 PSPVTMANLLKACGQS---GLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSA 300
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
VF+ +S +W A+IS ++G F+ + G DS T +S++ C +
Sbjct: 301 ALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQT 360
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ GR L +++ +E + +VDM + G +++A + G++
Sbjct: 361 SDLENGRILHSCIIRK-ELESHLVLSTAIVDMYSKCGAIKQATIVFGRM 408
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
F L+H S N + + IH IK +E + LI +Y+ + + VFD+
Sbjct: 48 VFSSLLHQFS--NTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQC 105
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKH 375
S E NA+I+G+ +N + + F + + + N+YT L A D +
Sbjct: 106 SLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEV-- 163
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G ++ G VGS++++ KRG + ++Q+VF+ EK W +II +
Sbjct: 164 GMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQ 223
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
G + + F EM G+RP +T ++L CG++G+
Sbjct: 224 KGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGL 261
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 213/647 (32%), Positives = 338/647 (52%), Gaps = 26/647 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLN-NPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVF 55
+N+Y A +F N + D+ WN+++SG+ K+ D F +N V
Sbjct: 46 INVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVP 105
Query: 56 DAVTYSTALSF--CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
D+ T+ + L E G +H+L+VK G +V V ++L+ MY+++ + +
Sbjct: 106 DSFTFPNVIKAYGALGRE--FLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQ 163
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHE 172
VFDEMP +D SWN ++S + Q G+ E L L M G + VS T A SAC
Sbjct: 164 VFDEMPERDVASWNTVISCFYQSGE--AEKALELFGRMESSGFEPNSVSLTVAISACSRL 221
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
LE GK+IH +K G+ V + L+ Y KC+ A +VF++M +++++W +MI
Sbjct: 222 LWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMI 281
Query: 233 SM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + V + M ++G P+ T ++ A S + G+ IHG I++
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN 341
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
++ V LI +Y + +E VF + SWN +IS Y G AV+ + +
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ KP+ TF SVL A ++ +L+ G++ H I + L++D ++ SALLDMY K G
Sbjct: 402 VSVGVKPDVVTFTSVLPA--CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCG 459
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ E+ R+FN +K +WT +ISA HG + QF EM+ G++PD +T L+VL+
Sbjct: 460 NEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP-GGPG 525
CG G+I +G F M Y IEP +HYSCM+D+LGR GRL EA E++ Q P
Sbjct: 520 ACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDN 579
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+L +L AC +H +G+RIA L++ P + +Y+++ NLYA W+ +R
Sbjct: 580 AELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLK 639
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLG 632
MK G+RK+ G SW ++ D + F + D +H R+E +Y ECL
Sbjct: 640 MKEMGLRKKPGCSWIEMS--DKVCHFFAEDRSHLRAENVY---ECLA 681
>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Glycine max]
Length = 722
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 209/602 (34%), Positives = 337/602 (55%), Gaps = 24/602 (3%)
Query: 11 DKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFAL--RMNLIGVVFDAVTYSTALSFC 67
+ AL +F+ + I WN V++G EK + +F L MN +GV D T++T LS C
Sbjct: 129 EHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATMLSLC 188
Query: 68 LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP---NKDSV 124
E F +G +HS+++K G V N+LITMY + G +V+A VF+E ++D V
Sbjct: 189 -SLELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYV 247
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
S+NA++ G+ + +A L +M + V+F S S+C +L G Q
Sbjct: 248 SYNAMIDGFASV-ERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSC---SSLRAGCQAQSQ 303
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDA 239
+IKMG+ V+V N +M+ YS + +F M +R+V+SW M+SM E+A
Sbjct: 304 AIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEA 363
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ + +MR +G+ P++ T+ L+ A +V+ MIH L K+ L + V N L++
Sbjct: 364 MLSYLKMRREGIEPDEFTYGSLLAATDSLQVVE---MIHSLLCKSG-LVKIEVLNALVSA 419
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTF 358
Y R ++ + ++F + + +ISWN++ISG+ NG L ++ F ++ + KPNAY+
Sbjct: 420 YCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSL 479
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
VL+ + +S HG++ H +I++ G S+ +G+AL+ MY K GS+ ++ RVF+
Sbjct: 480 SLVLSICSSMSAMS--HGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAM 537
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCGRNGMIHKG 477
E+ W AIISA A+HG E + F+ M+ + G++PD TF SVL+ C G++ G
Sbjct: 538 VERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDG 597
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
+FD+M+K Y PS DH+SC+VD+LGR G L+EAE ++ G ++ SL AC
Sbjct: 598 IRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKSGYFGAHSNICWSLFSACA 657
Query: 538 IHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGF 597
HGN+ +G +A +++ + YVL+SN+ A G WE A LR+ M+ G K+ G
Sbjct: 658 AHGNLGLGRTVARLILERDHNNPSVYVLLSNICAAAGQWEEAANLREMMREFGTIKQPGC 717
Query: 598 SW 599
SW
Sbjct: 718 SW 719
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 140/553 (25%), Positives = 256/553 (46%), Gaps = 86/553 (15%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSR----------------------WGRLV------ 109
QLH+L V+ GL + +V N+L+++Y++ W L+
Sbjct: 66 QLHALAVRTGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKL 125
Query: 110 ----EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
A +VFD +P WNA+++G + G+ A +M + G++ D +F +
Sbjct: 126 DSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDF-AFGLFRDMNKMGVKADKYTFATM 184
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD--- 222
S C E + G+ +H V IK G+ SV N L++ Y KC DA +VF +
Sbjct: 185 LSLCSLEL-FDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGS 243
Query: 223 RNVISWTTMI----SMNR-EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI 277
R+ +S+ MI S+ R EDA +F++M+ P +VTF+ ++ + S ++ G
Sbjct: 244 RDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSS---LRAGCQA 300
Query: 278 HGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS 337
IK F+ +V N ++TMY+ F + + + +F+ + R+++SWN ++S + Q L
Sbjct: 301 QSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLE 360
Query: 338 LAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
A+ ++ + +E +P+ +T+GS+L A + + + + H C S ++K+ V +
Sbjct: 361 EEAMLSYLKMRREGIEPDEFTYGSLLAATDSLQVVEMIHSLLCKSGLVKIE------VLN 414
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
AL+ Y + G I + ++F+ KS +W +IIS +G + QF + + V+P
Sbjct: 415 ALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKP 474
Query: 457 DSITFLSVLTVCGRNGMIHKG--------RHLFDSMLK---------------------- 486
++ + VL++C + G RH F S +
Sbjct: 475 NAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVF 534
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL----SVLQSLLGACRIHGNV 542
D +E ++ ++ + GR EEA + PG+ + S+L AC G V
Sbjct: 535 DAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLV 594
Query: 543 EMGERIADALMKM 555
+ G RI D ++K+
Sbjct: 595 DDGIRIFDTMVKV 607
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 186/386 (48%), Gaps = 23/386 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
M MY G+ + IF + D+VSWN ++S F + ++A+ L+M G+ D
Sbjct: 320 MTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAMLSYLKMRREGIEPDE 379
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY + L+ + +HSL+ K GL ++ V NAL++ Y R G++ A ++F
Sbjct: 380 FTYGSLLA---ATDSLQVVEMIHSLLCKSGL-VKIEVLNALVSAYCRHGKIKRAFQIFSG 435
Query: 118 MPNKDSVSWNAILSGYTQDGD--YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+P K +SWN+I+SG+ +G G+E AL+ K + S + S C +
Sbjct: 436 VPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKP---NAYSLSLVLSICSSMSAM 492
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
GKQ+HG ++ G+ + VS+GN L++ Y+KC A +VF M +R+ I+W +IS
Sbjct: 493 SHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAY 552
Query: 235 ----NREDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT-NFLS 288
E+AV F+ M+ G+ P+ TF ++ A S LV +G I +K F+
Sbjct: 553 AQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVP 612
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDE--LSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+C++ + R + ++E+V I W+ + A L L A
Sbjct: 613 SVDHFSCIVDLLGRSGYLDEAERVIKSGYFGAHSNICWSLFSACAAHGNLGLGRTVARLI 672
Query: 347 VIKE-SKPNAYTFGS-VLNAVGAAED 370
+ ++ + P+ Y S + A G E+
Sbjct: 673 LERDHNNPSVYVLLSNICAAAGQWEE 698
>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
Length = 762
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 199/576 (34%), Positives = 322/576 (55%), Gaps = 11/576 (1%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH ++ K G + V V N L+ Y + G + ARRVF EMP++DS+++NA++ G ++ G
Sbjct: 155 LHPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGR 214
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+G EA+ M R+G+ H +F+S + +L LG+QIHG+ ++ +V V N
Sbjct: 215 HG-EALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNN 273
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---NRED--AVSLFKEMRLDGVCP 253
L+ YSKC+ GD ++F M +R+ +S+ MIS NR A+ LF++M+ G
Sbjct: 274 ALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDR 333
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+ + L+ +K GR IH I E V N LI MY++ + ++ +F
Sbjct: 334 RTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIF 393
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
S + ISW ALI+G QNG + A+Q F + + P+ T S++ + + I
Sbjct: 394 AYKSDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIG 453
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
+ G++ H+++ K G GSALLDMY K G + E+ R FNE EK+ W A+ISA
Sbjct: 454 I--GRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISA 511
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
A++G ++ + F M + G+ PD +TFLSVL CG NG+ + FD M Y + P
Sbjct: 512 YAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSMSP 571
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
+HYSC++D LGR G ++ ++++ ++P + S+L +CRI+GN ++ A+ L
Sbjct: 572 WKEHYSCVIDTLGRAGCFDKIQKVIDEMPFEDDPIIWSSILHSCRIYGNQDLATVAAEKL 631
Query: 553 MKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFS 612
M P + +YV++SN+YA+ G+WE A ++K M+ +GV+KE G SW ++ ++ FS
Sbjct: 632 FTMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVKKESGNSWVEIK--QKIYMFS 689
Query: 613 SGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
S D+T+P +EI + E L EM + + + AL
Sbjct: 690 SNDHTNPMIDEIKKELERLYEEMDKQGYEPDTSCAL 725
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 233/502 (46%), Gaps = 46/502 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++ YCK G A +F + + D +++N ++ G + +AL M GV
Sbjct: 175 LDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMRREGVDTSH 234
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+S+ L+ G Q+H L V+ V+V NAL+ YS+ L + +++FDE
Sbjct: 235 FTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDLKQLFDE 294
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D+VS+N ++S + + G+ A+ +M G + + S S G ++++
Sbjct: 295 MSERDNVSYNVMISACSWNRCGGM-ALQLFRDMQTLGFDRRTLPYASLLSVAGALPHIKI 353
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+QIH I G VGN L+ YSKC + A +F D+ ISWT +I+
Sbjct: 354 GRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTALITGCVQ 413
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E+A+ LF +MR G+ P+ T ++ + S ++ GR +H K+ +
Sbjct: 414 NGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGHMPSVFS 473
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
+ L+ MYA+ + ++ + F+E+ + I+WNA+IS YAQ G + A++ F ++
Sbjct: 474 GSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGL 533
Query: 353 -PNAYTFGSVLNAVG----AAEDISLKHGQR-----------------------CHSHII 384
P+ TF SVL A G A E + R C I
Sbjct: 534 CPDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSMSPWKEHYSCVIDTLGRAGCFDKIQ 593
Query: 385 KV----GLDSDPIVGSALLD---MYGKRG-SIFESQRVFNETQEKSEFAWTAIISALARH 436
KV + DPI+ S++L +YG + + ++++F + A+ + + A+
Sbjct: 594 KVIDEMPFEDDPIIWSSILHSCRIYGNQDLATVAAEKLFTMVPTDAT-AYVILSNIYAKA 652
Query: 437 GDYESVMNQFKEMENKGVRPDS 458
G++E K M ++GV+ +S
Sbjct: 653 GNWEGAARVKKIMRDRGVKKES 674
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 158/331 (47%), Gaps = 22/331 (6%)
Query: 223 RNVISWTTMISM-----NREDAVSLFKEMRLDG-VCPNDVTFIGLIHA--ISIGNLVKEG 274
RN +WT M+ M DAVSLF++M +G P+DVT +++ +G L
Sbjct: 100 RNAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVLNVPGCDVGTL---- 155
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
H + K F + VCN L+ Y + + + +VF E+ R+ I++NA+I G ++
Sbjct: 156 ---HPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQ 212
Query: 335 GLSLAAVQAFFGVIKESKPNA-YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
G A++ F + +E + +TF S+L D+ L G++ H ++ +
Sbjct: 213 GRHGEALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHL--GRQIHGLFVRANPSCNVF 270
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
V +ALLD Y K S+ + +++F+E E+ ++ +ISA + + + F++M+ G
Sbjct: 271 VNNALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLG 330
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY-SCMVDMLGRVGRLEE 512
++ + S+L+V G I GR + ++ H D + ++DM + G L+
Sbjct: 331 FDRRTLPYASLLSVAGALPHIKIGRQIHAQLI--LHGLTLEDFVGNALIDMYSKCGMLDA 388
Query: 513 AEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
A+ + +S +L+ C +G E
Sbjct: 389 AKTIFAYKSDKTAIS-WTALITGCVQNGQNE 418
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 195/582 (33%), Positives = 324/582 (55%), Gaps = 19/582 (3%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRV 114
DA T+ L +G QLH+ ++ GL + + AL+ Y R+GR+ +A R
Sbjct: 70 DAFTFPPLLRAA---QGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FDEM ++D +WNA+LSG ++ EA+ M+ +G+ D V+ +S C +
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNAR-AAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGD 185
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L +H ++K G + V N ++ Y K + + KVF M R++++W ++IS
Sbjct: 186 RALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISG 245
Query: 235 NRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF-LS 288
+ + AV +F MR GV P+ +T + L AI+ + GR +H ++ + +
Sbjct: 246 HEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVG 305
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ N ++ MYA+ ++ ++++FD + R+ +SWN LI+GY QNGL+ A+ + +
Sbjct: 306 DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQ 365
Query: 349 KES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
K KP TF SVL A +L+ G R H+ IK GL+ D VG+ ++D+Y K G
Sbjct: 366 KHEGLKPIQGTFVSVLPAYSHLG--ALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCG 423
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ E+ +F +T +S W A+IS + HG ++ F +M+ +G+ PD +TF+S+L
Sbjct: 424 KLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLA 483
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G++ +GR+ F+ M Y I+P HY+CMVDM GR G+L++A + + +P P
Sbjct: 484 ACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDS 543
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
++ +LLGACRIHGNVEMG+ + L +++P G YVLMSN+YA+ G W+ V +R +
Sbjct: 544 AIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLV 603
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGD--NTHPRSEEIYR 626
+ + ++K G W+ + ++ F SG+ N HP+ EEI R
Sbjct: 604 RRQNLQKTPG--WSSIEVKRSVNVFYSGNQMNIHPQHEEIQR 643
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 228/454 (50%), Gaps = 18/454 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++ Y + G+ A F+ + + D+ +WN +LSG ++ +A+ RM + GV DA
Sbjct: 111 VHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDA 170
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT S+ L C+ L +H VK GLD E++V NA+I +Y + G L E R+VFD
Sbjct: 171 VTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDG 230
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++D V+WN+I+SG+ Q G A+ M G+ D ++ S ASA ++
Sbjct: 231 MSSRDLVTWNSIISGHEQGGQVA-SAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICG 289
Query: 178 GKQIHGVSIKMGYGT-HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+ +H ++ G+ + GN ++ Y+K A ++F M R+ +SW T+I+
Sbjct: 290 GRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYM 349
Query: 237 E-----DAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A+ ++ M + +G+ P TF+ ++ A S +++G +H L IKT +
Sbjct: 350 QNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDV 409
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V C+I +YA+ + ++ +F++ R WNA+ISG +G A+ F + +E
Sbjct: 410 YVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQE 469
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGS 407
P+ TF S+L A A L R ++++ PI + ++DM+G+ G
Sbjct: 470 GISPDHVTFVSLLAACSHA---GLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQ 526
Query: 408 IFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ ++ K + A W A++ A HG+ E
Sbjct: 527 LDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVE 560
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 202/639 (31%), Positives = 338/639 (52%), Gaps = 17/639 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
+ +G+ D+A F + P N ++ GF +D DAL+ M G D T+
Sbjct: 64 HVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTF 123
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
L C G H+ ++K GL ++VY N+L+ +Y++ G + +A RVFD MP
Sbjct: 124 PVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPA 183
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH--VSFTSAASACGHEKNLELG 178
+D VSWN ++ GY +G G A LA M L++ H V +A +AC E L LG
Sbjct: 184 RDIVSWNTMVDGYVSNG-MGALA-LACFREMNDALQVGHDSVGVIAALAACCLESALALG 241
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN 235
++IHG +I+ G V VG L+ Y KC A VF +M R V++W MI ++N
Sbjct: 242 REIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALN 301
Query: 236 RE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
DA F +MR+DG VT I L+ A + GR +H ++ +FL +
Sbjct: 302 ERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLE 361
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
L+ MY + ++ SEK+F +++ + ++SWN +I+ Y + A+ F ++ +
Sbjct: 362 TALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLY 421
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ +T +V+ A S++ ++ HS+I+K+G ++ +A++ MY + G+I S+
Sbjct: 422 PDYFTMTTVVPAFVLLG--SIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASR 479
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F++ K +W II A HG + + F EM+ G+ P+ TF+SVLT C +G
Sbjct: 480 EIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSG 539
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+ +G F+SM ++Y + P +HY CM D+LGR G L E + +P P + SL
Sbjct: 540 LEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSL 599
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L A R ++++ E A+ + ++E +G YV++S++YA+ G WE V +R MK KG+R
Sbjct: 600 LTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLR 659
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
+ S ++ + + F +GD +HP+SE+I+ ++ L
Sbjct: 660 RTEARSLVELNNKEC--SFVNGDMSHPQSEKIHEFSDIL 696
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 194/373 (52%), Gaps = 13/373 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD-DALSFAL--RMN-LIGVVFDAV 58
+Y K G A +F+ + DIVSWNT++ G+ + AL+ A MN + V D+V
Sbjct: 164 LYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSV 223
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
AL+ C G ++H ++ GL+ +V VG +L+ MY + G + A VF +M
Sbjct: 224 GVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKM 283
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P + V+WN ++ GY + + V+A ++M G +++ V+ + +AC ++ G
Sbjct: 284 PLRTVVTWNCMIGGYALN-ERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFG 342
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN--- 235
+ +H ++ + HV + L+ Y K + K+F ++ D+ ++SW MI+
Sbjct: 343 RSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYM 402
Query: 236 --REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
++A++LF E+ + P+ T ++ A + +++ + +H +K + +
Sbjct: 403 EMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIM 462
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-- 351
N ++ MYAR ++ S ++FD++ +++ISWN +I GYA +G A++ F +K S
Sbjct: 463 NAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALE-MFDEMKCSGM 521
Query: 352 KPNAYTFGSVLNA 364
+PN TF SVL A
Sbjct: 522 EPNESTFVSVLTA 534
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 147/282 (52%), Gaps = 9/282 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MYCK G A +F + +V+WN ++ G+ E+ DA ++M + G +
Sbjct: 264 VDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEV 323
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT L+ C E LFG +H+ +V+ V + AL+ MY + G++ + ++F +
Sbjct: 324 VTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQ 383
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +K VSWN +++ Y Y EAI +E++ + L D+ + T+ A ++
Sbjct: 384 ITDKTLVSWNNMIAAYMYMEMYQ-EAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQ 442
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM-----I 232
KQ+H +K+GYG + N +M Y++C + ++F +M ++VISW T+ I
Sbjct: 443 CKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAI 502
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+ A+ +F EM+ G+ PN+ TF+ ++ A S+ L EG
Sbjct: 503 HGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEG 544
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 16/160 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
M+MY + G + IF+ + D++SWNT++ G+ + AL M G+ +
Sbjct: 466 MHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNE 525
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
T+ + L+ C L+ EG+ + +S+ ++G+ ++ + + R G L E R
Sbjct: 526 STFVSVLTACSVSGLEAEGW---KEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLR 582
Query: 114 VFDEMP-NKDSVSWNAILSGYTQDGD-----YGVEAILAL 147
+ MP S W ++L+ D Y E I L
Sbjct: 583 FIENMPIAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQL 622
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 192/581 (33%), Positives = 328/581 (56%), Gaps = 44/581 (7%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR- 152
GN+L++ +R G + + R+F +P +D+VS+NA+L+G+++ G + A A + ++R
Sbjct: 79 TGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAH-ARAAGAYVALLRD 137
Query: 153 -KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
G+R ++ + + LG+Q+H +++G+G + G+ L+ Y+K G
Sbjct: 138 EAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIG 197
Query: 212 DANKVFRRMHDRNV-------------------------------ISWTTMISMNRE--- 237
DA +VF M +NV I+WTTM++ +
Sbjct: 198 DARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGL 257
Query: 238 --DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
+A+ +F+ MR +GV + TF ++ A ++EG+ IH +T + V +
Sbjct: 258 ESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSA 317
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
L+ MY++ S++ +E VF + + IISW A+I GY QNG AV+ F + ++ KP+
Sbjct: 318 LVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPD 377
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
+T GSV+++ A SL+ G + H + GL V +AL+ +YGK GSI ++ R+
Sbjct: 378 DFTLGSVISS--CANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRL 435
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F+E + +WTA++ A+ G + ++ F++M +KGV+PD +TF+ VL+ C R+G++
Sbjct: 436 FDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLV 495
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
KGR F SM +D+ I P DHY+CM+D+ R G L++AEE + Q+P P +LL
Sbjct: 496 DKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLS 555
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
ACR+ G++E+G+ A+ L+K++P SYVL+ +++A KG+W VA LR+GM+ + V+KE
Sbjct: 556 ACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKE 615
Query: 595 VGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
G SW + + +H FS+ D +HP S IY + L S+M
Sbjct: 616 PGCSW--IKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKM 654
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 140/470 (29%), Positives = 229/470 (48%), Gaps = 49/470 (10%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDDALS-----FALRMNLIGVVFDAVTYSTALSFCLDH 70
+F +L D VS+N +L+GF ++ AL + GV +T S +
Sbjct: 99 LFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASAL 158
Query: 71 EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK--------- 121
G Q+H I++ G + + G+ L+ MY++ G + +ARRVFDEM K
Sbjct: 159 GDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMI 218
Query: 122 ----------------------DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH 159
DS++W +++G TQ+G EA+ M +G+ +D
Sbjct: 219 TGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNG-LESEALDVFRRMRAEGVGIDQ 277
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR 219
+F S +ACG LE GKQIH + Y +V VG+ L+ YSKC A VFRR
Sbjct: 278 YTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRR 337
Query: 220 MHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
M +N+ISWT MI + E+AV +F EM+ DG+ P+D T +I + + ++EG
Sbjct: 338 MMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEG 397
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
H L + + +V N L+T+Y + S++D+ ++FDE+S + +SW AL+ GYAQ
Sbjct: 398 AQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQF 457
Query: 335 GLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
G + + F ++ K KP+ TF VL+A + L R + H ++ D P+
Sbjct: 458 GKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRS---GLVDKGRSYFHSMQQDHDIVPL 514
Query: 394 VG--SALLDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYE 440
+ ++D+Y + G + +++ + + F W ++SA GD E
Sbjct: 515 DDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDME 564
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 170/329 (51%), Gaps = 11/329 (3%)
Query: 12 KALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCL 68
+A +F + D ++W T+++G ++ +AL RM GV D T+ + L+ C
Sbjct: 229 EARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACG 288
Query: 69 DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
G Q+H+ I + + V+VG+AL+ MYS+ + A VF M K+ +SW A
Sbjct: 289 ALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTA 348
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
++ GY Q+G G EA+ EM R G++ D + S S+C + +LE G Q H +++
Sbjct: 349 MIVGYGQNG-CGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVS 407
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLF 243
G +V+V N L++ Y KC DA+++F M + +SWT ++ ++ + LF
Sbjct: 408 GLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLF 467
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR-MIHGLCIKTNFLSEPSVCNCLITMYAR 302
++M GV P+ VTFIG++ A S LV +GR H + + + C+I +Y+R
Sbjct: 468 EKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSR 527
Query: 303 FESMQDSEKVFDELS-CREIISWNALISG 330
++ +E+ ++ C + W L+S
Sbjct: 528 SGWLKQAEEFIKQMPRCPDAFGWATLLSA 556
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 171/371 (46%), Gaps = 46/371 (12%)
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---------MNREDAVS 241
G ++ GN L+S ++ + D ++F + R+ +S+ +++ V+
Sbjct: 74 GRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVA 133
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
L ++ GV P+ +T G++ S GR +H ++ F + + L+ MYA
Sbjct: 134 LLRDEA--GVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYA 191
Query: 302 RFESMQDSEKVFDE----------------LSC---------------REIISWNALISG 330
+ + D+ +VFDE L C R+ I+W +++G
Sbjct: 192 KVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTG 251
Query: 331 YAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
QNGL A+ F + E + YTFGS+L A GA +L+ G++ H++I + +
Sbjct: 252 LTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALA--ALEEGKQIHAYITRTCYE 309
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
+ VGSAL+DMY K S+ ++ VF K+ +WTA+I ++G E + F EM
Sbjct: 310 DNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEM 369
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
+ G++PD T SV++ C + +G F + + P + +V + G+ G
Sbjct: 370 QRDGIKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLRPYVTVSNALVTLYGKCGS 428
Query: 510 LEEAEELVGQI 520
+E+A L ++
Sbjct: 429 IEDAHRLFDEM 439
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 92/182 (50%), Gaps = 4/182 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K A +F + +I+SW ++ G+ ++ ++A+ M G+ D
Sbjct: 319 VDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDD 378
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + +S C + G Q H L + GL V V NAL+T+Y + G + +A R+FDE
Sbjct: 379 FTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDE 438
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D VSW A++ GY Q G E I +M+ KG++ D V+F SAC ++
Sbjct: 439 MSFHDQVSWTALVMGYAQFGK-AKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDK 497
Query: 178 GK 179
G+
Sbjct: 498 GR 499
>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
Length = 638
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 204/625 (32%), Positives = 335/625 (53%), Gaps = 16/625 (2%)
Query: 24 DIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
+ ++W +++ G+ + + AL+ A M+ G + T S L C + +FG Q H
Sbjct: 5 NTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFGQQFH 64
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
++K G D V VG +LI MY+R +A +VFD M KD +N ++ Y + G+ G
Sbjct: 65 CFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAGN-G 123
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
+AI I M+ GL+ + +FT+ SAC + +E G+Q G+S K G+ S+GN +
Sbjct: 124 EKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAI 183
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPND 255
++ Y K + +A ++F M DRN+ISWT +IS + + AV F E+ L GV +
Sbjct: 184 INMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDS 243
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
++ S ++ G IHGL IK + ++ L+ +YA+ ++ + VFD
Sbjct: 244 SLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFDG 303
Query: 316 LSCREIISWNALISGYAQN---GLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDIS 372
LS + I S+NA+++G+ +N G V + KP+ TF +L+ +A +
Sbjct: 304 LSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSL--SANHST 361
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L G+ H++ IK G ++D V +A++ MY K GSI E+ R+FN + +W A+ISA
Sbjct: 362 LGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISA 421
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
A HG V+ F+EM K PD IT LS+L C +G+ G LF+ M Y I+P
Sbjct: 422 YALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYGIKP 481
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
+HY+CMVD+LGR G L EA +++ + P + ++L+ C++ G+ G+ + L
Sbjct: 482 LLEHYACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLVNVCKLCGDRNFGKLASKYL 541
Query: 553 MKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFS 612
+++ P +GSY+L+SN+YA + + A +R M + KE G SW ++ D +H F
Sbjct: 542 LELSPVEAGSYILVSNMYAGERMLDEAAKVRTVMNDLKLSKEAGTSWIEID--DKVHHFV 599
Query: 613 SGDNTHPRSEEIYRMAECLGSEMKY 637
+ HP S EIY + L +M++
Sbjct: 600 ASGKDHPESNEIYAELDLLRDDMRW 624
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 220/436 (50%), Gaps = 23/436 (5%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +++++W +++ GY D ++ E+ L + EM + G L+ + + AC
Sbjct: 1 MLVRNTITWTSLIKGYLDDNEF--ESALNIASEMHKSGEALNEHTCSVILQACSSPDYRI 58
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
G+Q H IK G+ +V VG L++ Y++ ++ GDA KVF M ++V + MI
Sbjct: 59 FGQQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYA 118
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL-VKEGRMIHGLCIKTNFLSEP 290
+ N E A+ +F M G+ PND TF +I A G+L ++EG GL K FL+E
Sbjct: 119 RAGNGEKAIRVFINMLNAGLQPNDYTFTNIISACD-GDLGIEEGEQFLGLSFKYGFLNET 177
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
S+ N +I MY + +++E++F ++ R +ISW ALISGY ++G AV F E
Sbjct: 178 SIGNAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFM----E 233
Query: 351 SKPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
F S L G +E +L+ G + H +IK+G +G+AL+D+Y K G+
Sbjct: 234 LHLCGVNFDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGN 293
Query: 408 IFESQRVFNETQEKSEFAWTAIISAL---ARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
+ ++ VF+ K ++ AI++ +R G+ + ++ F G++PD +TF +
Sbjct: 294 LMSARMVFDGLSSKRIASFNAILAGFMENSRDGEEDPIV-LFNHFRLDGIKPDMVTFSRL 352
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L++ + + +GR +K E + ++ M + G +EEA + +
Sbjct: 353 LSLSANHSTLGRGRCYHAYAIKT-GFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHD 411
Query: 525 GLSVLQSLLGACRIHG 540
+S +++ A +HG
Sbjct: 412 SIS-WNAMISAYALHG 426
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 155/283 (54%), Gaps = 9/283 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+NMY K G +A +F+ + + +++SW ++SG+ +S D A+ + ++L GV FD+
Sbjct: 184 INMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDS 243
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T L C + GLQ+H L++K G V +G AL+ +Y++ G L+ AR VFD
Sbjct: 244 SLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFDG 303
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
+ +K S+NAIL+G+ ++ G E + L R G++ D V+F+ S + L
Sbjct: 304 LSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLG 363
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+ H +IK G+ +SV N +++ Y+KC +A+++F M+D + ISW MIS
Sbjct: 364 RGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYA 423
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+ LF+EM P+++T + ++ A + L ++G
Sbjct: 424 LHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDG 466
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE-KSDDALSFALRMNLIGVVF--DA 57
+ MY K G ++A +FN +N+ D +SWN ++S + A L +I F D
Sbjct: 388 ITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQGAKVLLLFEEMIKKEFAPDE 447
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLI-VKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T + L C F G+ L +++ K+G+ + ++ + R G L EA + +
Sbjct: 448 ITILSILQACTYSGLFRDGISLFNVMEPKYGIKPLLEHYACMVDLLGRAGHLSEAMDIIN 507
Query: 117 EMP-NKDSVSWNAILSGYTQDGD--YGVEAILALIEM 150
+ P +K ++ W +++ GD +G A L+E+
Sbjct: 508 KSPFSKSTLLWRTLVNVCKLCGDRNFGKLASKYLLEL 544
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 208/658 (31%), Positives = 355/658 (53%), Gaps = 39/658 (5%)
Query: 1 MNMYCKSGQFDKALCIFN--NLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVF 55
+ MY + G + A +F+ +L DI+ WN++++ + + L +M +GVV
Sbjct: 163 ITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVA 222
Query: 56 DA-VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+TY++ ++ C +G +H I+K GL++ + N+L+T Y + G L A ++
Sbjct: 223 PTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEA-TNLWNSLVTFYGKCGNLQHASQL 281
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK---GLRLDHVSFTSAASACGH 171
F+ + KD VSWNA+++ Q G+ E L L M K ++ + V+F S SA
Sbjct: 282 FERISRKDVVSWNAMIAANEQRGE--GENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSG 339
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
L G++IH ++ S+ N L++ YSKC G A ++F R+ R++ISW +M
Sbjct: 340 LSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSM 399
Query: 232 ISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGN----LVKEGRMIHGLCI 282
++ ++ +FK M L G+ P+ + + +A S + + G+ IHG +
Sbjct: 400 LAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYIL 459
Query: 283 K--TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+ T SV N ++ MYA+F + D+EK+F + R+ SWNA++ GY++N
Sbjct: 460 RRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDV 519
Query: 341 VQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-------GLDSDPI 393
+ F ++K+ P + S+L +SL+ G++ H+ + K+ DS
Sbjct: 520 LMIFLDILKQGFPLDHVSLSIL-LTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLS 578
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+ +AL+ MY K GSI ++ +VF + + K F+WTA+I+ A HG + F+ M+ G
Sbjct: 579 INNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDG 638
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
++P+ +TFL++L C G++ +G + FDSM DY + PS +HY+CM+D+ GR G+ + A
Sbjct: 639 IKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRA 698
Query: 514 EELV--GQIPGGPG----LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMS 567
+ LV G P L++ + LLGAC +++G A ++++EP +Y+L++
Sbjct: 699 KSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLA 758
Query: 568 NLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
NLYA G WE +RK M+ KG+RKEVG SW D G+ H F +GD HP+ +EIY
Sbjct: 759 NLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRR--HVFVAGDVYHPQRKEIY 814
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 281/557 (50%), Gaps = 43/557 (7%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDD-ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFL 74
+F+N N D++SW+ +++ + + + A +F L ++G +S A +
Sbjct: 77 LFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGE 136
Query: 75 FGL--QLH--SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE--MPNKDSVSWNA 128
GL QLH S+ FGLDS + A ITMYSR G L +A+RVFDE + D + WN+
Sbjct: 137 IGLCRQLHGWSIRTGFGLDSGIRA--AWITMYSRCGVLEDAQRVFDETSLLALDILLWNS 194
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
I++ Y G + VE + +M+ G + +++ S +ACG + G +HG IK
Sbjct: 195 IIAAYIFHGCW-VEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSL 242
G ++ N L++ Y KC A+++F R+ ++V+SW MI+ N E+A+ L
Sbjct: 254 AGLEA-TNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGL 312
Query: 243 FKEMRL--DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
F+ M V PN VTF+ L+ A+S + ++ GR IH + + + S+ N LIT Y
Sbjct: 313 FRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFY 372
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFG 359
++ + + ++F+ L R+IISWN++++GY QN F ++ +P++++
Sbjct: 373 SKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLT 432
Query: 360 SVLNAVGAAED----ISLKHGQRCHSHIIK------VGLDSDPIVGSALLDMYGKRGSIF 409
+ NA A+ D I + G+ H +I++ V L V +A+L MY K I
Sbjct: 433 IIFNA--ASRDSSGLIYFRRGKEIHGYILRRITPGGVSLS----VSNAILKMYAKFNRIA 486
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++++F + + ++W A++ +R+ +E V+ F ++ +G D ++ +LT CG
Sbjct: 487 DAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCG 546
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYS------CMVDMLGRVGRLEEAEELVGQIPGG 523
R + G+ + K ++ + P S ++ M + G +++A ++ ++
Sbjct: 547 RLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERK 606
Query: 524 PGLSVLQSLLGACRIHG 540
S +++ C HG
Sbjct: 607 DVFS-WTAMITGCAHHG 622
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 222/428 (51%), Gaps = 24/428 (5%)
Query: 107 RLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA 166
RL A+++FD PN+D +SW+A+++ Y++ G++ +A +MM +GL+ + S S
Sbjct: 70 RLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFA-QAFGLFQKMMGEGLQPNGFSLASLL 128
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF--RRMHDRN 224
+ L +Q+HG SI+ G+G + ++ YS+C V DA +VF + +
Sbjct: 129 KVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALD 188
Query: 225 VISWTTMISMN-----REDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIH 278
++ W ++I+ + + LF +M G V P ++T+ +++A K G M+H
Sbjct: 189 ILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVH 248
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
G IK L ++ N L+T Y + ++Q + ++F+ +S ++++SWNA+I+ Q G
Sbjct: 249 GRIIKAG-LEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGE 307
Query: 339 AAVQAFFGVIK---ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A+ F ++K +PN TF S+L+AV +L+ G+ H+HI ++ L+ D +
Sbjct: 308 NALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLS--ALRCGREIHAHIFRLSLEVDTSIT 365
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
++L+ Y K + +++ +F + +W ++++ ++ + FK M G+
Sbjct: 366 NSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIE 425
Query: 456 PDSITFLSVLTVCGRN--GMIH--KGRHLFDSMLKDYHIEP---SPDHYSCMVDMLGRVG 508
PDS + + R+ G+I+ +G+ + +L+ I P S + ++ M +
Sbjct: 426 PDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILR--RITPGGVSLSVSNAILKMYAKFN 483
Query: 509 RLEEAEEL 516
R+ +AE++
Sbjct: 484 RIADAEKI 491
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 143/284 (50%), Gaps = 11/284 (3%)
Query: 278 HGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS 337
HG + F+ S C+ + + E ++ ++++FD R++ISW+ALI+ Y++ G
Sbjct: 45 HGF--SSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNF 102
Query: 338 LAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
A F ++ E +PN ++ S+L + +I L ++ H I+ G D + +
Sbjct: 103 AQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGL--CRQLHGWSIRTGFGLDSGIRA 160
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSE--FAWTAIISALARHGDYESVMNQFKEMENKG- 453
A + MY + G + ++QRVF+ET + W +II+A HG + V+ F +M + G
Sbjct: 161 AWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGV 220
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
V P +T+ SV+ CG +G G + ++K +E + + ++ +V G+ G L+ A
Sbjct: 221 VAPTELTYASVVNACGSSGEEKYGAMVHGRIIKA-GLEAT-NLWNSLVTFYGKCGNLQHA 278
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
+L +I +S +++ A G E + ++K+EP
Sbjct: 279 SQLFERISRKDVVS-WNAMIAANEQRGEGENALGLFRRMLKVEP 321
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 210/649 (32%), Positives = 344/649 (53%), Gaps = 20/649 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y K+G D AL +F+++ + D VSWN ++ G SD L + + +I +
Sbjct: 77 LDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNV 136
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T A+ C GL++H I++ G V N+L++MY+ + A +FDE
Sbjct: 137 STLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDE 195
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D +SW+ ++ GY Q G+ + L L + LD ++ S AC + ++ +
Sbjct: 196 MCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISM 255
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+ +HGV I G + VGN ++ YSKC+ A K F M RN +SW ++IS
Sbjct: 256 GRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVR 315
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+SLF M G ++VT + L+ + + + IH + I+ + V
Sbjct: 316 TEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFV 375
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ES 351
N LI Y++ + ++ + K+FD L ++ +SW+A+I+G+ G A+ F + + +
Sbjct: 376 INSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQE 435
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN T S+L A + D LK + H I+ GL ++ VG+A+LDMY K G I S
Sbjct: 436 KPNGVTILSLLEAFSVSAD--LKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLS 493
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
++ F++ EK+ +W A+I+A +G + EM+ G++P+ +T LSVL+ C
Sbjct: 494 RKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHG 553
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP----GGPGLS 527
G++ +G F++M++D+ +EP +HYSCMVDML R G+L A L+ ++P G GL
Sbjct: 554 GLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGL- 612
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+LL ACR GN +G A ++++EP S Y L S++YA G W A +R +K
Sbjct: 613 -WGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVK 671
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++GVR G+S V D F +GD +HPR+ EI+ + E L MK
Sbjct: 672 ARGVRVVAGYSLVHVE--DKAWRFVAGDESHPRAGEIWGVVEQLHDCMK 718
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 194/392 (49%), Gaps = 23/392 (5%)
Query: 87 GLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG--DYGV--- 141
G DS GN+++ Y + G L A VFD M ++DSVSWN ++ G+ G D G+
Sbjct: 65 GFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWF 124
Query: 142 -EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
+A + E L L A AC +E G ++HG I+ G+ SV N L
Sbjct: 125 RQARVIAFEPNVSTLVL-------AIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSL 177
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPND 255
+S Y+ ++ A ++F M +R+VISW+ MI + + A+ LF EM + D
Sbjct: 178 LSMYADNDME-RAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELD 236
Query: 256 -VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
+T + ++ A + + GR +HG+ I + V N +I MY++ + + + K F+
Sbjct: 237 GITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFN 296
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISL 373
E+ CR +SWN++ISG + A+ F+ + K + + T ++L + D
Sbjct: 297 EMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPF- 355
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
+ HS +I+ G + + V ++L+D Y K I + ++F+ + K +W+A+I+
Sbjct: 356 -QCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGF 414
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + + F+EM +P+ +T LS+L
Sbjct: 415 NHCGKPDEAIALFQEMNQAQEKPNGVTILSLL 446
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 203/638 (31%), Positives = 351/638 (55%), Gaps = 27/638 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N Y K G A +F+ +++ ++V W T++ + ++ D A S M G+ +
Sbjct: 90 INFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSS 149
Query: 58 VTYSTALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT LS L+ L LQ LH+ ++++G S+V + N+++ +Y + GR+ +A+ +F+
Sbjct: 150 VTMLGLLSGVLE----LVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFE 205
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +D +SWN+++SGY Q G+ E + LI M G+ D +F S SA + L
Sbjct: 206 LMDARDVISWNSLVSGYAQLGNIR-EVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLG 264
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MN 235
+GK +HG ++ G + L+ Y KC A ++F M ++VISWT MIS +
Sbjct: 265 VGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLV 324
Query: 236 RED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ D AV++F+ M V P+ T ++ A + G +HG ++ +
Sbjct: 325 QNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIP 384
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
N L+TMYA+ ++ S VFD +S R+I+SWNA++SG+AQNG A+ F + K
Sbjct: 385 SQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKAR 444
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P++ T S+L A + +L G+ H+ + K L ++ +AL+DMY K G +
Sbjct: 445 QRPDSITVVSLLQACASIG--ALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGS 502
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+Q+ F+ ++ +W++II+ HG E+ + + + + G++P+ + +LS+L+ C
Sbjct: 503 AQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSH 562
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
NG++ +G F SM KD+ IEP +H +C+VD+L R GR+EEA ++ P + VL
Sbjct: 563 NGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLG 622
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
LL ACR GNVE+G+ +A ++ ++PA +G+YV +++ YA W+ V + MKS
Sbjct: 623 ILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLH 682
Query: 591 VRKEVGFSWADVGDIDGLHG----FSSGDNTHPRSEEI 624
++K G+S+ + LHG F + ++HP+ EEI
Sbjct: 683 LKKLPGWSFIE------LHGTITTFFTDHSSHPQFEEI 714
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/536 (27%), Positives = 264/536 (49%), Gaps = 17/536 (3%)
Query: 22 NPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQ 78
NP S+N +++ + D L M DA T+ + + C + F GL
Sbjct: 10 NPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLS 69
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
H ++ G S+ Y+ +LI YS++G AR+VFD M +++ V W ++ YT+ G+
Sbjct: 70 FHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGE 129
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+ V + I M R+G++ V+ S +L+ +H I+ G+G+ V++ N
Sbjct: 130 HDVAFSMYNI-MRRQGIQPSSVTMLGLLSGVLELVHLQC---LHACVIQYGFGSDVALAN 185
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCP 253
+++ Y KC DA +F M R+VISW +++S N + + L M+ DG+ P
Sbjct: 186 SMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEP 245
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+ TF L+ A ++ + + G+M+HG ++ + + LI MY + ++ + ++F
Sbjct: 246 DQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIF 305
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
+ + +++ISW A+ISG QN + AV F ++K P+ T SVL A AE S
Sbjct: 306 EGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAA--CAELGS 363
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
G H +I++ + D ++L+ MY K G + +S VF+ + +W AI+S
Sbjct: 364 FPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSG 423
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
A++G + F EM RPDSIT +S+L C G +H+G+ + + + K + P
Sbjct: 424 HAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSC-LGP 482
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
+ +VDM + G L A++ ++P +S S++ HG E R+
Sbjct: 483 CILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVS-WSSIIAGYGSHGKGETALRM 537
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 339/646 (52%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K D AL F+ + + VSW ++G E+ + ++M +G+
Sbjct: 193 VDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQ 252
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y++A C QLH+ +K S+ VG A++ +Y++ G LV+ARR F
Sbjct: 253 PAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIG 312
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P+ + + NA++ G + G G EA+ M R G+ D +S + SAC K
Sbjct: 313 LPHHNVETCNAMMVGLVRTG-LGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQ 371
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR- 236
G Q+H +++K G+ V V N ++ Y KC+ +A VF+ M R+ +SW +I+
Sbjct: 372 GLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQ 431
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
ED ++ EM G+ P+D T+ ++ A + ++ G ++HG IK+ + V
Sbjct: 432 NECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFV 491
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-- 350
+ ++ MY + ++ +++K+ D + +E++SWN++ISG++ S A Q FF + +
Sbjct: 492 SSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEA-QRFFSEMLDMG 550
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+ +T+ +VL+ I L G++ H IIK + D + S L+DMY K G++ +
Sbjct: 551 VKPDHFTYATVLDTCANLATIEL--GKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPD 608
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S +F + ++ +W A+I A HG + F+ M+ V P+ TF++VL C
Sbjct: 609 SLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSH 668
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ G F M Y + P +H++CMVD+LGR +EA E + +P V +
Sbjct: 669 VGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWK 728
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL C+I +VE+ E A +++++P + Y+L+SN+YA G W V+ R+ M+
Sbjct: 729 TLLSICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGR 788
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+RKE G SW +V +HGF GD HPRS+E+Y M L EMK
Sbjct: 789 LRKEPGCSWIEVQ--SEMHGFLVGDKVHPRSKEVYEMLNSLIGEMK 832
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 151/524 (28%), Positives = 266/524 (50%), Gaps = 17/524 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ Y +G D A +F + +PD+VSWNT++SG+ + +++ ++ M+ GV D
Sbjct: 92 LTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDR 151
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C + G+Q+H+L VK GL+++V G+AL+ MY + L +A R F
Sbjct: 152 TTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHG 211
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++SVSW A ++G Q+ Y + ++M R GL + ++ SA +C L
Sbjct: 212 MGERNSVSWGAAIAGCVQNEQY-TRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLST 270
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT-MISMNR 236
+Q+H +IK + + VG ++ Y+K DA + F + NV + M+ + R
Sbjct: 271 ARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVR 330
Query: 237 E----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF+ M GV + ++ G+ A + +G +H L +K+ F + V
Sbjct: 331 TGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCV 390
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N ++ +Y + +++ ++ VF E+ R+ +SWNA+I+ QN + +++
Sbjct: 391 RNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGM 450
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ +T+GSVL A + SL++G H IK GL D V S ++DMY K G+I E+
Sbjct: 451 EPDDFTYGSVLKACAGLQ--SLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEA 508
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
Q++ + + +W +IIS + E F EM + GV+PD T+ +VL C
Sbjct: 509 QKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANL 568
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEA 513
I G+ + ++K E D Y S +VDM + G + ++
Sbjct: 569 ATIELGKQIHGQIIKQ---EMLGDEYISSTLVDMYAKCGNMPDS 609
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 236/522 (45%), Gaps = 52/522 (9%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL----- 130
G H+ ++ G +V N L+ MY+R G A VFD MP++D+VSWN +L
Sbjct: 38 GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVH 97
Query: 131 --------------------------SGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS 164
SGY Q G + L++ EM R+G+ LD +
Sbjct: 98 AGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSM-EMSRRGVALDRTTLAV 156
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
+CG +L LG QIH +++K G T V G+ L+ Y KC DA + F M +RN
Sbjct: 157 LLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERN 216
Query: 225 VISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
+SW I+ ++ + LF +M+ G+ + + + + + R +H
Sbjct: 217 SVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHA 276
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
IK F S+ V ++ +YA+ ++ D+ + F L + + NA++ G + GL
Sbjct: 277 HAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAE 336
Query: 340 AVQAF-FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
A+Q F F + + V +A AE G + H +K G D D V +A+
Sbjct: 337 AMQLFQFMTRSGVGFDVISLSGVFSA--CAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAI 394
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
LD+YGK ++ E+ VF E +++ +W AII+AL ++ YE + EM G+ PD
Sbjct: 395 LDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDD 454
Query: 459 ITFLSVLTVCG-----RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
T+ SVL C G++ G+ + + D + S +VDM + G + EA
Sbjct: 455 FTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVS------STVVDMYCKCGAITEA 508
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM 555
++L +I GG L S++ + E +R ++ M
Sbjct: 509 QKLHDRI-GGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDM 549
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 139/338 (41%), Gaps = 51/338 (15%)
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L G+ H + G+ V N L+ Y++C T A+ VF M R+ +SW TM++
Sbjct: 35 LTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLTA 94
Query: 235 -----NREDAVSLF-------------------------------KEMRLDGVCPNDVTF 258
+ + A SLF EM GV + T
Sbjct: 95 YVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTL 154
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC 318
L+ + + + G IH L +KT ++ + L+ MY + S+ D+ + F +
Sbjct: 155 AVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGE 214
Query: 319 REIISWNALISGYAQNGLSLAAVQAF-------FGVIKESKPNAYTFGSVLNAVGAAEDI 371
R +SW A I+G QN ++ F GV + + +A+ + + + A +
Sbjct: 215 RNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQL 274
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
H+H IK SD +VG+A++D+Y K G++ +++R F + A++
Sbjct: 275 --------HAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMV 326
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
L R G M F+ M GV D I+ V + C
Sbjct: 327 GLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACA 364
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
TF + +A +L GQ H+ ++ G V + LL MY + G + VF+
Sbjct: 19 TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
+ +W +++A GD ++ + F M + PD +++ ++++ ++GM
Sbjct: 79 TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPD----PDVVSWNTLISGYCQHGMF 132
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/616 (31%), Positives = 327/616 (53%), Gaps = 18/616 (2%)
Query: 31 VLSGFEKSDDALSFALRMNLIGV---VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG 87
VL G E + +SF+ NL G + D T + + + G QLH+++++ G
Sbjct: 49 VLEGVE---EIISFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGG 105
Query: 88 LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
++ N + +YS+ G L ++FD+M ++ VSW +I++G+ + + EA+ +
Sbjct: 106 CLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQ-EALSSF 164
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
+M +G + +S AC ++ G Q+H + +K G+G + VG+ L YSKC
Sbjct: 165 CQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKC 224
Query: 208 EVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLI 262
DA K F M ++ + WT+MI + + + A++ + +M D V + +
Sbjct: 225 GELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTL 284
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS-CREI 321
A S G+ +H +K F E + N L MY++ M + VF S C I
Sbjct: 285 SACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISI 344
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
+S A+I GY + A+ F + + +PN +TF S++ A A L+HG + H
Sbjct: 345 VSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKA--CANQAKLEHGSQLH 402
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
++K DP V S L+DMYGK G S ++F+E + E AW ++ ++HG
Sbjct: 403 GQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGR 462
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCM 500
+ + F M ++G++P+++TF+++L C GM+ G + F SM K Y + P +HYSC+
Sbjct: 463 NAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCV 522
Query: 501 VDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGS 560
+D+LGR G+L+EAE+ + +P P + S LGAC+IHG++E + AD LMK+EP S
Sbjct: 523 IDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENS 582
Query: 561 GSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPR 620
G++VL+SN+YA++ WE V LRK +K + K G+SW D+ + H F D +HP+
Sbjct: 583 GAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIR--NKTHVFGVEDWSHPQ 640
Query: 621 SEEIYRMAECLGSEMK 636
+EIY + L ++K
Sbjct: 641 KKEIYEKLDNLLDQIK 656
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 143/455 (31%), Positives = 241/455 (52%), Gaps = 21/455 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+N+Y K G+ D + +F+ ++ ++VSW ++++GF + +ALS +M + G +
Sbjct: 117 LNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQ 176
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ L C FG Q+H L+VK G E++VG+ L MYS+ G L +A + F+E
Sbjct: 177 FALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEE 236
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP KD+V W +++ G+ ++GD+ +A+ A ++M+ + +D S SAC K
Sbjct: 237 MPCKDAVLWTSMIDGFVKNGDFK-KALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSF 295
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMI---- 232
GK +H +K+G+ +GN L YSK A+ VF+ D +++S T +I
Sbjct: 296 GKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYV 355
Query: 233 SMNR-EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
M++ E A+S F ++R G+ PN+ TF LI A + ++ G +HG +K NF +P
Sbjct: 356 EMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPF 415
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + L+ MY + S ++FDE+ + I+WN L+ ++Q+GL A++ F G+I
Sbjct: 416 VSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRG 475
Query: 352 -KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRG 406
KPNA TF ++L G ED G S + K+ G+ S ++D+ G+ G
Sbjct: 476 LKPNAVTFVNLLKGCSHAGMVED-----GLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAG 530
Query: 407 SIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ E++ N E + F W + + A HGD E
Sbjct: 531 KLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDME 565
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 335/617 (54%), Gaps = 24/617 (3%)
Query: 24 DIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
+I+S N +LSG+ + L + M + D VT+ L+ + + G Q+H
Sbjct: 286 EIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVH 345
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
+ +K GLD + V N+LI MY + ++ AR VF+ M +D +SWN++++G Q D
Sbjct: 346 CMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQ-SDLE 404
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGH-EKNLELGKQIHGVSIKMGYGTHVSVGNV 199
VEA+ ++++R GL+ DH + TS A + L L KQIH +IK V
Sbjct: 405 VEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTA 464
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPN 254
L+ YS+ +A +F R ++ ++++W M+S + + LF M G +
Sbjct: 465 LIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSD 523
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
D T ++ + +G+ +H IK+ + + V + ++ MY + M ++ FD
Sbjct: 524 DFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFD 583
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAF-----FGVIKESKPNAYTFGSVLNAVGAAE 369
+ + ++W LISG +NG A+ F GV+ P+ +T ++ A
Sbjct: 584 SIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVL----PDEFTIATLAKASSCL- 638
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+L+ G++ H++ +K+ SDP VG++L+DMY K GSI ++ +F + + AW A+
Sbjct: 639 -TALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 697
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
+ LA+HG+ + + FK+ME+ G++PD +TF+ VL+ C +G++ + SM +DY
Sbjct: 698 LVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYG 757
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I+P +HYSC+ D LGR G ++EAE L+ + S+ ++LL ACR+ G+ E G+R+A
Sbjct: 758 IKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVA 817
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
L+++EP S +YVL+SN+YA W+ + + R MK V+K+ GFSW +V + +H
Sbjct: 818 TKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVK--NKIH 875
Query: 610 GFSSGDNTHPRSEEIYR 626
F D ++P++E IY+
Sbjct: 876 LFVVDDRSNPQTELIYK 892
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 233/470 (49%), Gaps = 29/470 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMYCK + A +FNN++ D++SWN+V++G +SD +A+ +++ G+ D
Sbjct: 364 INMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDH 423
Query: 58 VTYSTALSFCLD-HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T ++ L EG Q+H +K ++ +V ALI YSR + EA +F
Sbjct: 424 YTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFG 483
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
N D V+WNA++SGYTQ D G + + M ++G R D + + CG +
Sbjct: 484 R-NNFDLVAWNAMMSGYTQSHD-GHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAIN 541
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GKQ+H +IK GY + V + ++ Y KC A F + + ++WTT+IS
Sbjct: 542 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCI 601
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E A+ +F +MRL GV P++ T L A S +++GR IH +K N S+P
Sbjct: 602 ENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPF 661
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FG 346
V L+ MYA+ S+ D+ +F + I +WNA++ G AQ+G A+Q F G
Sbjct: 662 VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLG 721
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDIS--LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ KP+ TF VL+A + +S K+ + H G+ + S L D G+
Sbjct: 722 I----KPDKVTFIGVLSACSHSGLVSEAYKYIRSMHR---DYGIKPEIEHYSCLADALGR 774
Query: 405 RGSIFESQRVFNE-TQEKSEFAWTAIISALARHGDYES---VMNQFKEME 450
G + E++ + + + E S + +++A GD E+ V + E+E
Sbjct: 775 AGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELE 824
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 153/560 (27%), Positives = 259/560 (46%), Gaps = 57/560 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL------SFAL-RMNLIGV 53
++MY K G A +F+ + D+VSWN++L+ + +S + + +F L R+ V
Sbjct: 88 ISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDV 147
Query: 54 VFDA-VTYSTALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
V+ + +T S L CL H G++ + H K GLD + +V AL+ +Y ++G++ E
Sbjct: 148 VYTSRMTLSPMLKLCL-HSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEG 206
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG- 170
R +F+EMP +D V WN +L Y +EM G + + + +SA G
Sbjct: 207 RVLFEEMPYRDVVLWNLMLKAY--------------LEM---GFKEEAIDLSSAFHTSGL 249
Query: 171 --HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
+E L L +I G + G GN DA+ V + RN I
Sbjct: 250 HPNEITLRLLSRISGDDSEAGQVKSFENGN-------------DASAV-SEIISRNKILS 295
Query: 229 TTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ + + F +M + + VTFI ++ + + G+ +H + +K
Sbjct: 296 GYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDL 355
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+V N LI MY + + + VF+ +S R++ISWN++I+G AQ+ L + AV F ++
Sbjct: 356 MLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLL 415
Query: 349 KES-KPNAYTFGSVLNAVGA-AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ KP+ YT SVL A + E +SL ++ H H IK +D V +AL+D Y +
Sbjct: 416 RCGLKPDHYTMTSVLKAASSLPEGLSL--SKQIHVHAIKTNNVADSFVSTALIDAYSRNR 473
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ E++ +F AW A++S + D + F M +G R D T +VL
Sbjct: 474 CMKEAEVLFGRNN-FDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLK 532
Query: 467 VCGRNGMIHKGRHLFDSMLK---DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
CG I++G+ + +K D + S S ++DM + G + A+ IP
Sbjct: 533 TCGFLFAINQGKQVHAYAIKSGYDLDLWVS----SGILDMYVKCGDMSAAQFAFDSIP-V 587
Query: 524 PGLSVLQSLLGACRIHGNVE 543
P +L+ C +G E
Sbjct: 588 PDDVAWTTLISGCIENGEEE 607
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 184/402 (45%), Gaps = 42/402 (10%)
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
+ G H+ I+ + E ++ N LI+MYS+ G L ARRVFD+MP +D VSWN+IL+
Sbjct: 62 LMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAA 121
Query: 133 YTQDGDYGVEAI---LALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
Y Q + VE + L ++R+ + ++ + C H + + HG + K+
Sbjct: 122 YAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKI 181
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLF 243
G V L++ Y K + +F M R+V+ W M+ +E+A+ L
Sbjct: 182 GLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 241
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
G+ PN++T + L+ IS G+ + G++ F
Sbjct: 242 SAFHTSGLHPNEIT-LRLLSRIS-GDDSEAGQV------------------------KSF 275
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLN 363
E+ D+ V EIIS N ++SGY G A ++ F ++ ES +L
Sbjct: 276 ENGNDASAV------SEIISRNKILSGYLHAGQYSALLKCFMDMV-ESDLECDQVTFILV 328
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
A SL GQ+ H +K+GLD V ++L++MY K I ++ VFN E+
Sbjct: 329 LATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDL 388
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
+W ++I+ +A+ + F ++ G++PD T SVL
Sbjct: 389 ISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVL 430
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
AIS +L+ G+ H + E + N LI+MY++ S+ + +VFD++ R+++S
Sbjct: 56 AISTSDLML-GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVS 114
Query: 324 WNALISGYAQN--GLSLAAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRC 379
WN++++ YAQ+ G+ +AF F ++++ YT L+ + + L G C
Sbjct: 115 WNSILAAYAQSSEGVVENVKEAFLLFRILRQDV--VYTSRMTLSPM---LKLCLHSGYVC 169
Query: 380 -----HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
H + K+GLD D V AL+++Y K G + E + +F E + W ++ A
Sbjct: 170 ASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYL 229
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITF 461
G E ++ G+ P+ IT
Sbjct: 230 EMGFKEEAIDLSSAFHTSGLHPNEITL 256
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 133/325 (40%), Gaps = 47/325 (14%)
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+L LGK H + + + N L+S YSKC A +VF +M +R+++SW ++++
Sbjct: 61 DLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILA 120
Query: 234 M----------NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
N ++A LF+ +R D V + +T ++ V HG K
Sbjct: 121 AYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACK 180
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ V L+ +Y +F +++ +F+E+ R+++ WN ++ Y + G
Sbjct: 181 IGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGF------- 233
Query: 344 FFGVIKESKPNAYTFGSVLNAVGA-AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
K A S + G +I+L+ R G DS+
Sbjct: 234 --------KEEAIDLSSAFHTSGLHPNEITLRLLSRIS------GDDSEA---------- 269
Query: 403 GKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
G+ S FE+ N+ SE + I+S G Y +++ F +M + D +TF
Sbjct: 270 GQVKS-FENG---NDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTF 325
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLK 486
+ VL R + G+ + LK
Sbjct: 326 ILVLATAVRLDSLALGQQVHCMALK 350
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/545 (34%), Positives = 307/545 (56%), Gaps = 23/545 (4%)
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
+ARR+FD MP ++ V+W A+++GYT + + + +EM+ G H + + +AC
Sbjct: 91 DARRLFDGMPERNVVTWTALVTGYTLNSQPAL-GLEVFVEMLEMGRYPSHYTLGATLNAC 149
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
+++LGKQ+HG +IK G + S+GN L S Y+K A + F R+ ++NVI+WT
Sbjct: 150 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWT 209
Query: 230 TMISMNRED------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
TMIS ED +SLF +M +DGV PN+ T ++ + G+ + K
Sbjct: 210 TMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFK 269
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ------NGLS 337
+ V N + +Y R ++ ++F+++ II+WNA+ISGYAQ + L
Sbjct: 270 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 329
Query: 338 LAA--VQAF--FGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
+ QA F +K S KP+ +TF S+L+ A ++L+ G++ H+ IK G SD
Sbjct: 330 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAM--MALEQGEQIHAQTIKSGFLSD 387
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+V SAL++MY K G I ++ + F E ++ WT++IS ++HG + + F+EM
Sbjct: 388 VVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRL 447
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
GVRP+ ITF+S+L+ C G++ + H FD M K+Y IEP DHY CM+DM R+GR+E
Sbjct: 448 AGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVE 507
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
+A + + P ++ SL+ CR HGN+E+ AD L++++P G +Y+L+ N+Y
Sbjct: 508 DAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYI 567
Query: 572 EKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
W+ VA +RK MK + V SW + D ++ F + D THP++ E+Y++ E L
Sbjct: 568 STERWQDVARVRKLMKQEDVGILRDRSWITIK--DKVYFFRANDRTHPQATELYQLLENL 625
Query: 632 GSEMK 636
+ K
Sbjct: 626 LEKAK 630
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 235/465 (50%), Gaps = 29/465 (6%)
Query: 16 IFNNLNNPDIVSWNTVLSGFE-KSDDALSFALRMNLI--GVVFDAVTYSTALSFCLDHEG 72
+F+ + ++V+W +++G+ S AL + + ++ G T L+ CL
Sbjct: 95 LFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCD 154
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G Q+H +K+G +S +GN+L ++Y++ G L A R F +P K+ ++W ++S
Sbjct: 155 VDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISA 214
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
+D + + I+M+ G+ + + TS S CG +L LGKQ+ S K+G T
Sbjct: 215 CAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCET 274
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-------MNRED------- 238
++ V N M Y + T +A ++F +M D ++I+W MIS ++D
Sbjct: 275 NLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRG 334
Query: 239 --AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
A+++F++++ + P+ TF ++ S +++G IH IK+ FLS+ V + L
Sbjct: 335 FQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSAL 394
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNA 355
+ MY + +QD+ K F E+ R ++W ++ISGY+Q+G A+Q F + + +PN
Sbjct: 395 VNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNE 454
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIFESQR 413
TF S+L+A A L + ++K +P+V ++DM+ + G + ++
Sbjct: 455 ITFVSLLSACSYA---GLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFS 511
Query: 414 VFNETQ-EKSEFAWTAIISALARHGDYESVM---NQFKEMENKGV 454
T E +E W+++++ HG+ E ++ E++ KG+
Sbjct: 512 FIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGI 556
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 186/357 (52%), Gaps = 25/357 (7%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA----LSFALRMNLIGVVFDA 57
++Y K G D AL F + ++++W T++S + ++ +S + M + GV+ +
Sbjct: 182 SLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNE 241
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++ +S C G Q+ + K G ++ + V N+ + +Y R G EA R+F++
Sbjct: 242 FTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQ 301
Query: 118 MPNKDSVSWNAILSGYTQDGD----------YGVEAILALIEMMRKGLRLDHVSFTSAAS 167
M + ++WNA++SGY Q D G +A+ ++ R ++ D +F+S S
Sbjct: 302 MEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILS 361
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
C LE G+QIH +IK G+ + V V + L++ Y+KC DANK F M R ++
Sbjct: 362 VCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVT 421
Query: 228 WTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
WT+MIS ++A+ LF+EMRL GV PN++TF+ L+ A S LV+E + +
Sbjct: 422 WTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDM-M 480
Query: 283 KTNFLSEPSVCN--CLITMYARFESMQDSEKVFDE--LSCREIISWNALISGYAQNG 335
K + EP V + C+I M+ R ++D+ E I W++L++G +G
Sbjct: 481 KKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAI-WSSLVAGCRSHG 536
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 15/185 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIG----VVF- 55
M +Y + G+ D+A+ +F + + I++WN ++SG+ + D+ L+ G +F
Sbjct: 283 MYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFR 342
Query: 56 ---------DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWG 106
D T+S+ LS C G Q+H+ +K G S+V V +AL+ MY++ G
Sbjct: 343 DLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCG 402
Query: 107 RLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA 166
+ +A + F EMP + V+W +++SGY+Q G EAI EM G+R + ++F S
Sbjct: 403 CIQDANKAFLEMPTRTFVTWTSMISGYSQHGQ-PQEAIQLFEEMRLAGVRPNEITFVSLL 461
Query: 167 SACGH 171
SAC +
Sbjct: 462 SACSY 466
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAV 365
+D+ ++FD + R +++W AL++GY N ++ F +++ + P+ YT G+ LNA
Sbjct: 90 RDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 149
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
A+ D+ L G++ H + IK G +S +G++L +Y K GS+ + R F EK+
Sbjct: 150 LASCDVDL--GKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVIT 207
Query: 426 WTAIISALARHGDYESV---MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
WT +ISA A D E V M+ F +M GV P+ T SV+++CG ++ G+ +
Sbjct: 208 WTTMISACAE--DEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQV 263
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 312/563 (55%), Gaps = 15/563 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
GL LH++ +K S+V V N ++ +Y++ +L EAR+VFDEM ++ VSW+A++SGY Q
Sbjct: 22 GLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSWSAMISGYEQ 81
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
G E I AL + + + + S SAC K L GKQIHG ++K G +
Sbjct: 82 IG----EPISALGLFSKLNIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSF 137
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDG 250
V N L++ Y KC DA + + N +++ +I+ + + + M DG
Sbjct: 138 VSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDG 197
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
P+ TF+GL+ + + +K G ++H IK S + N +ITMY++ ++++E
Sbjct: 198 FFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAE 257
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAA 368
K F + +++ISWN IS + A++AF ++ E + P+ +TF S L A
Sbjct: 258 KAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGL 317
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
S+ +G++ H H+I+ L D G+AL++MY K G I ++ +F++ + ++ +W
Sbjct: 318 A--SMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNT 375
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+I+ HG F +M+ GV+PDS+TF+ +LT G++ +G F+SM + Y
Sbjct: 376 MIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETY 435
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
I P +H+SC++D+LGR GRL EA+E + + P G VL SLL ACR+HG+V+ G+
Sbjct: 436 GISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACRLHGDVDTGKCF 495
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL 608
A L+K++PA + YVL+SNLYA W+ VA K +K G++KE G S +V
Sbjct: 496 ARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLKKEPGHSLIEVNGT--F 553
Query: 609 HGFSSGDNTHPRSEEIYRMAECL 631
F+ D +H R EEI M + L
Sbjct: 554 EKFTVVDFSHSRIEEIMDMLKIL 576
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 233/461 (50%), Gaps = 34/461 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
+N+Y K + +A +F+ ++ ++VSW+ ++SG+E+ + +S + + +V + Y
Sbjct: 45 LNLYAKCRKLREARQVFDEMSERNLVSWSAMISGYEQIGEPISALGLFSKLNIVPNEYVY 104
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
++ +S C +G + G Q+H +KFGLDS +V NALITMY + G+ +A ++E
Sbjct: 105 ASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALE 164
Query: 121 KDSVSWNAILSGYT--QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+ V++NA+++G+ Q D G E L M + G D +F C +L+ G
Sbjct: 165 LNPVAYNALITGFVENQQPDKGFE---VLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRG 221
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+ +H +IK+ + +GN++++ YSK + +A K FR + ++++ISW T IS
Sbjct: 222 ELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHC 281
Query: 235 -NREDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E A+ FKEM + V P++ TF + A S + G+ IHG I+T +
Sbjct: 282 NDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGA 341
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGV 347
N LI MYA+ + + +F ++ + ++SWN +I+G+ +G A + F GV
Sbjct: 342 GNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGV 401
Query: 348 IKESKPNAYTFGSVLNAVGAA--EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
KP++ TF +L A A D L + G+ + S L+D+ G+
Sbjct: 402 ----KPDSVTFVGLLTASNHAGLVDEGLVYFNSMEE---TYGISPEIEHFSCLIDLLGRA 454
Query: 406 GSIFESQRVFNETQEKSEFAWTAII-----SALARHGDYES 441
G + E++ E +K F ++ SA HGD ++
Sbjct: 455 GRLNEAK----EYMKKFPFGHDTVVLGSLLSACRLHGDVDT 491
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 163/332 (49%), Gaps = 26/332 (7%)
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C K L G +H ++IK + V V N +++ Y+KC +A +VF M +RN++SW
Sbjct: 13 CSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSW 72
Query: 229 TTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
+ MIS + A+ LF ++ + PN+ + +I A + + +G+ IHG +K
Sbjct: 73 SAMISGYEQIGEPISALGLFSKLN---IVPNEYVYASVISACASLKGLVQGKQIHGQALK 129
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG-------- 335
S V N LITMY + D+ ++E +++NALI+G+ +N
Sbjct: 130 FGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEV 189
Query: 336 LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
L + FF P+ +TF +L + +D LK G+ H IK+ L+S +G
Sbjct: 190 LRMMYQDGFF-------PDRFTFVGLLGTCNSRDD--LKRGELLHCQTIKLKLNSTAFIG 240
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-V 454
+ ++ MY K + E+++ F +EK +W IS+ + D+E + FKEM N+ V
Sbjct: 241 NLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRV 300
Query: 455 RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
RPD TF S L C + G+ + +++
Sbjct: 301 RPDEFTFASALAACSGLASMCNGKQIHGHLIR 332
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 132/255 (51%), Gaps = 5/255 (1%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
LIH S +++G +H + IKT S+ V N ++ +YA+ ++++ +VFDE+S R
Sbjct: 9 LIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERN 68
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
++SW+A+ISGY Q G ++A+ F + PN Y + SV++A + + L G++ H
Sbjct: 69 LVSWSAMISGYEQIGEPISALGLFSKL--NIVPNEYVYASVISACASLK--GLVQGKQIH 124
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
+K GLDS V +AL+ MY K G ++ +NE E + A+ A+I+ + +
Sbjct: 125 GQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPD 184
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCM 500
+ M G PD TF+ +L C + +G L +K + + + +
Sbjct: 185 KGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIK-LKLNSTAFIGNLI 243
Query: 501 VDMLGRVGRLEEAEE 515
+ M ++ LEEAE+
Sbjct: 244 ITMYSKLNLLEEAEK 258
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 204/632 (32%), Positives = 329/632 (52%), Gaps = 36/632 (5%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + +IVSWN ++SG+ D AL ++M + V FD VT A+ C +
Sbjct: 218 LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGS 277
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G Q+H L +KF ++Y+ NAL+ MYS G L + ++F+ +PN+D+ WN+++S
Sbjct: 278 LKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISA 337
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH-EKNLELGKQIHGVSIKMGYG 191
Y G + EA+ I M +G++ D + S C L GK +H IK G
Sbjct: 338 YAAFGCHE-EAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMR 396
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEM 246
S+GN L+S Y++ K+F RM ++ISW TMI + R A LF+ M
Sbjct: 397 IDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERM 456
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
R + PN T I ++ A + GR IHG +K + + L MY
Sbjct: 457 RESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDE 516
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVG 366
+ +F+ R++ISWNA+I +++PN+ T +VL++
Sbjct: 517 ATARDLFEGCPDRDLISWNAMIX--------------------KAEPNSVTIINVLSSF- 555
Query: 367 AAEDISLKHGQRCHSHIIKVG--LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+L GQ H+++ + G L D + +A + MY + GS+ ++ +F +++
Sbjct: 556 -THLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNII 614
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+W A+I+ +G M F +M G RP+ +TF+SVL+ C +G I G LF SM
Sbjct: 615 SWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSM 674
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
++D+++ P HYSC+VD+L R G ++EA E + +P P SV ++LL +CR + + +
Sbjct: 675 VQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQ 734
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
+ I + L K+EP +G+YVL+SN+YA G W V +R +K KG+RK G SW V
Sbjct: 735 AKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVK- 793
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ +H FS+GD +HP+S++IY L S M+
Sbjct: 794 -NQVHCFSAGDRSHPQSDKIYAKLSILLSSMR 824
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 249/514 (48%), Gaps = 26/514 (5%)
Query: 24 DIVSWNTVL--SGFEKSDDA-LSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
D WN+V+ K+D A LS +M +GV+ + T L C G +H
Sbjct: 24 DPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIH 83
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
I L +V VG A++ Y + G + +AR VFD M ++D V WNA++ GY G Y
Sbjct: 84 RSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYE 143
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG-YGTHVSVGNV 199
EA+L + EM R+ LR + + + AC L LG+ +HG ++ G + ++ V
Sbjct: 144 -EAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATA 202
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPN 254
L+ Y + ++ +F M RN++SW MIS + A+ LF +M +D V +
Sbjct: 203 LIGFYLRFDMRV-LPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFD 261
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
VT + + A + +K G+ IH L IK F+ + + N L+ MY+ S++ S ++F+
Sbjct: 262 CVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFE 321
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFF-----GVIKESKPNAYTFGSVLNAVGAAE 369
+ R+ WN++IS YA G A+ F GV K+ + +V+ + E
Sbjct: 322 SVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDER-------TVVIMLSMCE 374
Query: 370 DIS--LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
+++ L G+ H+H+IK G+ D +G+ALL MY + + Q++F+ + +W
Sbjct: 375 ELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWN 434
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
+I ALAR+ F+ M ++P+S T +S+L C + GR + ++K
Sbjct: 435 TMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMK- 493
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ IE + + + DM G A +L P
Sbjct: 494 HSIEINQPLRTALADMYMNCGDEATARDLFEGCP 527
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 156/331 (47%), Gaps = 18/331 (5%)
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
N + +S + +M GV PN+ T ++ A + N V+ G+ IH T+ + + V
Sbjct: 40 NDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGT 99
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
++ Y + ++D+ VFD +S R+++ WNA++ GY G A+ + +E+ +P
Sbjct: 100 AVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRP 159
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-DSDPIVGSALLDMYGKRGSIFESQ 412
N+ T ++L A A ++ L G+ H + ++ G+ DS+P V +AL+ Y R +
Sbjct: 160 NSRTMVALLLACEGASELRL--GRGVHGYCLRNGMFDSNPHVATALIGFY-LRFDMRVLP 216
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F+ ++ +W A+IS GDY + F +M V+ D +T L + C G
Sbjct: 217 LLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELG 276
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIPG--GPGLSV 528
+ G+ + +K +E D Y + +++M G LE + +L +P P +
Sbjct: 277 SLKLGKQIHQLAIKFEFVE---DLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNS 333
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+ S A H E D ++M+ G
Sbjct: 334 MISAYAAFGCH------EEAMDLFIRMQSEG 358
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF----EKSDDALSFALRMNLIGVVFD 56
+ MY + G A IF L +I+SWN +++G+ SD L+F+ +M G +
Sbjct: 589 ITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFS-QMLEDGFRPN 647
Query: 57 AVTYSTALSFCLDHEGFL-FGLQL-HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
VT+ + LS C H GF+ GLQL HS++ F + E+ + ++ + +R G + EAR
Sbjct: 648 GVTFVSVLSAC-SHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREF 706
Query: 115 FDEMP-NKDSVSWNAILS 131
D MP D+ W A+LS
Sbjct: 707 IDSMPIEPDASVWRALLS 724
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 298/531 (56%), Gaps = 10/531 (1%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G ++H + G+DS+V V ++TMY+R G + A+++F E+ +D V+W+AI++ + Q
Sbjct: 7 GTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQ 66
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
G Y EA+ M +GL+ + V S+ AC +L+LGK +H ++K +S
Sbjct: 67 SG-YPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDIS 125
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDG 250
VG L+S Y+KC A +F RM ++V++W MI+ + A+ +F +++L
Sbjct: 126 VGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSE 185
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
+ PN T +GL+ A ++ N + +G IHG IK F SE V LI MYA+ S+ +E
Sbjct: 186 LNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAE 245
Query: 311 KVFDELSCR-EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
+F CR + +SWN +I+GY +G ++ A AF + E+ +PN T +VL AV A
Sbjct: 246 FLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAV--A 303
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+L+ G H+++I++G S VG+ L+DMY K G + S+++F+E + K +W
Sbjct: 304 HLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNV 363
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+++ A HG + F M++ +R DS +F++VL+ C G+I +GR +FDSM K +
Sbjct: 364 MLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQH 423
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
+EP +HY+CM D+LGR G E +L+ +P P V +LLGA +H NV++ E
Sbjct: 424 QLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFA 483
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSW 599
L K+E Y +SN YA G W V R + G+RK G+SW
Sbjct: 484 LHHLDKLEHKNLTHYAALSNTYARSGRWADVGNTRSKITKTGLRKSPGYSW 534
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 236/474 (49%), Gaps = 28/474 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M MY + G+ D A +F + D+V+W+ +++ F +S +ALS M G+ +
Sbjct: 30 MTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGYPQEALSLFRSMQNEGLQANK 89
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V ++L C + G +H VK +D ++ VG AL++MY++ G A +F+
Sbjct: 90 VILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGFFALALTLFNR 149
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA-----SACGHE 172
MP KD V+WNA+++GY Q G+ +EM K L+L ++ S A
Sbjct: 150 MPCKDVVTWNAMINGYAQIGE-----PFPALEMFHK-LQLSELNPNSGTMVGLLPAFALL 203
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTM 231
+L+ G IHG IK G+ + V L+ Y+KC A +F R R + +SW M
Sbjct: 204 NDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVM 263
Query: 232 I-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I S + DA S F +M+L+ + PN VT + ++ A++ + ++ G +H I+ F
Sbjct: 264 IAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGF 323
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S+ V NCLI MYA+ + SEK+F E+ ++ +SWN +++GYA +G A++ F
Sbjct: 324 QSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSR 383
Query: 347 VI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGK 404
+ E + ++++F +VL+A A I G++ + K L+ D + + D+ G+
Sbjct: 384 MQDSEIRLDSFSFINVLSACRHAGLIG--EGRKIFDSMSKQHQLEPDLEHYACMADLLGR 441
Query: 405 RGSIFESQRVFNE-TQEKSEFAWTAIISALARHGDY---ESVMNQFKEMENKGV 454
G E + E W A++ A H + E ++ ++E+K +
Sbjct: 442 AGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKLEHKNL 495
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
+L G H + G+DSD V + ++ MY + G + ++++F E + + AW+AII+
Sbjct: 3 ALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIA 62
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A + G + ++ F+ M+N+G++ + + LS L C + G+ + +K +++
Sbjct: 63 AFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKA-NVD 121
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +V M + G A L ++P
Sbjct: 122 LDISVGTALVSMYAKCGFFALALTLFNRMP 151
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 210/658 (31%), Positives = 353/658 (53%), Gaps = 24/658 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY + G +A +F+ + D+VSWN+++SG+ ++AL + +V D+
Sbjct: 148 VDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDS 207
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ L + G LH +K G++S V V N L+ MY ++ R +ARRVFDE
Sbjct: 208 FTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDE 267
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL---RLDHVSFTSAASACGHEKN 174
M +DSVS+N ++ GY + +E + + M + L + D ++ +S ACGH ++
Sbjct: 268 MDVRDSVSYNTMICGYLK-----LEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRD 322
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L L K I+ +K G+ +V N+L+ Y+KC A VF M ++ +SW ++IS
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISG 382
Query: 235 NRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ +A+ LFK M + + +T++ LI + +K G+ +H IK+ +
Sbjct: 383 YIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID 442
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N LI MYA+ + DS K+F + + ++WN +IS + G +Q + K
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK 502
Query: 350 -ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E P+ TF L + L G+ H +++ G +S+ +G+AL++MY K G +
Sbjct: 503 SEVVPDMATFLVTLPMCASLAAKRL--GKEIHCCLLRFGYESELQIGNALIEMYSKCGCL 560
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S RVF + WT +I A +G+ E + F +ME G+ PDS+ F++++ C
Sbjct: 561 ENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYAC 620
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G++ +G F+ M Y I+P +HY+C+VD+L R ++ +AEE + +P P S+
Sbjct: 621 SHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASI 680
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
S+L ACR G++E ER++ ++++ P G +L SN YA W+ V+++RK +K
Sbjct: 681 WASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKD 740
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK---YLNSKRE 643
K + K G+SW +VG +H FSSGD++ P+SE IY+ E L S M Y+ RE
Sbjct: 741 KHITKNPGYSWIEVG--KNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPRE 796
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 165/571 (28%), Positives = 287/571 (50%), Gaps = 21/571 (3%)
Query: 13 ALCIFNNLNNP-DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCL 68
+L +F ++ ++ WN+++ F K+ +AL F ++ V D T+ + + C
Sbjct: 58 SLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA 117
Query: 69 DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
G ++ I+ G +S+++VGNAL+ MYSR G L AR+VFDEMP +D VSWN+
Sbjct: 118 GLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNS 177
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
++SGY+ G Y EA+ E+ + D + +S A G+ ++ G+ +HG ++K
Sbjct: 178 LISGYSSHGYYE-EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKS 236
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLF 243
G + V V N L++ Y K DA +VF M R+ +S+ TMI E++V +F
Sbjct: 237 GVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF 296
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
E LD P+ +T ++ A + + I+ +K F+ E +V N LI +YA+
Sbjct: 297 LE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKC 355
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-FGVIKESKPNAYTFGSVL 362
M + VF+ + C++ +SWN++ISGY Q+G + A++ F +I E + + T+ ++
Sbjct: 356 GDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
+ D LK G+ HS+ IK G+ D V +AL+DMY K G + +S ++F+
Sbjct: 416 SVSTRLAD--LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGD 473
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
W +ISA R GD+ + + +M V PD TFL L +C G+ +
Sbjct: 474 TVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHC 533
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
+L+ + E + +++M + G LE + + ++ + + G +G
Sbjct: 534 CLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRD----VVTWTGMIYAYGMY 588
Query: 543 EMGERIADALMKMEPAG--SGSYVLMSNLYA 571
GE+ + ME +G S V ++ +YA
Sbjct: 589 GEGEKALETFADMEKSGIVPDSVVFIAIIYA 619
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 250/488 (51%), Gaps = 17/488 (3%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM-PNKDSVSWNAILSGYTQD 136
++H+L++ GLDS + LI YS + + VF + P K+ WN+I+ ++++
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKN 84
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G + EA+ ++ + D +F S AC + E+G ++ + MG+ + + V
Sbjct: 85 GLFP-EALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGV 251
GN L+ YS+ + A +VF M R+++SW ++IS E+A+ ++ E++ +
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 252 CPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
P+ T ++ A GNL VK+G+ +HG +K+ S V N L+ MY +F D+
Sbjct: 204 VPDSFTVSSVLPA--FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDA 261
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAE 369
+VFDE+ R+ +S+N +I GY + + +V+ F + + KP+ T SVL A G
Sbjct: 262 RRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLR 321
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
D+SL + +++++K G + V + L+D+Y K G + ++ VFN + K +W +I
Sbjct: 322 DLSL--AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD-Y 488
IS + GD M FK M + D IT+L +++V R + G+ L + +K
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
I+ S + ++DM + G + ++ ++ + G ++ +++ AC G+ G ++
Sbjct: 440 CIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISACVRFGDFATGLQV 496
Query: 549 ADALMKME 556
+ K E
Sbjct: 497 TTQMRKSE 504
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 222/475 (46%), Gaps = 30/475 (6%)
Query: 159 HVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR 218
VS + A NL ++IH + I +G + L+ YS + VFR
Sbjct: 4 RVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFR 63
Query: 219 RMHD-RNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
R+ +NV W ++I + +A+ + ++R V P+ TF +I A + +
Sbjct: 64 RVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G +++ + F S+ V N L+ MY+R + + +VFDE+ R+++SWN+LISGY+
Sbjct: 124 MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 333 QNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
+G A++ + +K S P+++T SVL A G + +K GQ H +K G++S
Sbjct: 184 SHGYYEEALEIYHE-LKNSWIVPDSFTVSSVLPAFGNL--LVVKQGQGLHGFALKSGVNS 240
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
+V + L+ MY K +++RVF+E + ++ +I + E + F E
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL 300
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
++ +PD +T SVL CG + +++++ MLK + S + ++D+ + G +
Sbjct: 301 DQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR-NILIDVYAKCGDM 358
Query: 511 EEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM-EPAGSGSYVLMSNL 569
A ++ + +S S++ G++ ++ +M M E A +Y+++ ++
Sbjct: 359 ITARDVFNSMECKDTVS-WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 570 YAEKGDWEMVAILRKGMKSKGVRKEVGFS----------WADVGDI-DGLHGFSS 613
D + KG+ S G++ + +A G++ D L FSS
Sbjct: 418 STRLADLK----FGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSS 468
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 226/705 (32%), Positives = 345/705 (48%), Gaps = 76/705 (10%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFDAVT 59
Y G F A +F + + WN+ + F+ S +L L ++ GVVFD+
Sbjct: 617 YLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEV 676
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR-WGRLVEARRVFDEM 118
YS AL C G+++H ++K G D +VY+ AL+ Y R WG L +A +VF EM
Sbjct: 677 YSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWG-LEKANQVFHEM 735
Query: 119 PNKDSVSWNA--ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
PN +++ WN IL+ ++ GVE +M L+ + + ACG L
Sbjct: 736 PNPEALLWNEAIILNLQSEKLQKGVELFR---KMQFSFLKAETATIVRVLQACGKMGALN 792
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
KQIHG + G + VS+ N L+S YSK A +VF M +RN SW +MIS
Sbjct: 793 AAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYA 852
Query: 234 ----MN---------------------------------REDAVSLFKEMRLDGVCPNDV 256
+N +E+ +++ + M+ +G PN
Sbjct: 853 ALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSS 912
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
+ ++ AIS + G+ HG ++ F + V LI MY + S+ ++ VFD +
Sbjct: 913 SMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNM 972
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF----------------- 358
R I +WN+L+SGY+ G+ A++ + KE KP+ T+
Sbjct: 973 KNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAF 1032
Query: 359 ----GSVLNAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
S+ + A +SL + G+ H I+ G D V +AL+DMY K S+ + +
Sbjct: 1033 MPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHK 1092
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF Q K+ +W +I A G + ++ F EM+ GV PD+ITF ++L+ C +G+
Sbjct: 1093 VFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGL 1152
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
I +G FDSM+ DY I P +HY CMVD+LGR G L+EA +L+ +P P ++ +LL
Sbjct: 1153 IGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALL 1212
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
G+CRIH N+ E A L K+EP S +Y+LM NLY+ WE + LR+ M + GVR
Sbjct: 1213 GSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRN 1272
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+SW + +H FSS + HP + +IY L SEMK L
Sbjct: 1273 RQVWSWIQIN--QRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKL 1315
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 195/431 (45%), Gaps = 67/431 (15%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS---GFEKSDDALSFALRMNLIGVVFDA 57
MN Y + +KA +F+ + NP+ + WN + EK + +M + +
Sbjct: 716 MNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAET 775
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T L C Q+H + +FGLDS+V + N LI+MYS+ G+L ARRVFD
Sbjct: 776 ATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDS 835
Query: 118 MPNKDSVSWNAILSGYTQDG----------------------------------DYGVEA 143
M N+++ SWN+++S Y G Y E
Sbjct: 836 MENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEV 895
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
+ L M +G + + S TS A L +GK+ HG ++ G+ V VG L+
Sbjct: 896 LNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDM 955
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTF 258
Y K A VF M +RN+ +W +++S EDA+ L +M +G+ P+ VT+
Sbjct: 956 YVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTW 1015
Query: 259 IGLI------------------------HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
G+I A + +L+++G+ IH L I+ F+ + V
Sbjct: 1016 NGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVAT 1075
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI MY++ S++++ KVF + + + SWN +I G+A GL A+ F + K P
Sbjct: 1076 ALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGP 1135
Query: 354 NAYTFGSVLNA 364
+A TF ++L+A
Sbjct: 1136 DAITFTALLSA 1146
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 193/541 (35%), Positives = 317/541 (58%), Gaps = 25/541 (4%)
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A +VFD+MP ++ V+W +++ + Q G +AI ++M G D +++S SAC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLG-CARDAIDLFLDMELSGYVPDRFTYSSVLSACT 67
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG---DANKVFRRMHDRNVIS 227
L LGKQ+H I++G V VG L+ Y+KC G D+ KVF +M + NV+S
Sbjct: 68 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 127
Query: 228 WTTMISMNRE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE--GRMIHG 279
WT +I+ + +A+ LF +M + PN +F ++ A GNL G ++
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC--GNLSDPYTGEQVYS 185
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
+K S V N LI+MYAR M+D+ K FD L + ++S+NA++ GYA+N L
Sbjct: 186 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKN---LK 242
Query: 340 AVQAF--FGVIKESKP--NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
+ +AF F I ++ +A+TF S+L+ GAA ++ G++ H ++K G S+ +
Sbjct: 243 SEEAFLLFNEIADTGIGISAFTFASLLS--GAASIGAMGKGEQIHGRLLKGGYKSNQCIC 300
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+AL+ MY + G+I + +VFNE ++++ +WT++I+ A+HG + F +M G +
Sbjct: 301 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 360
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P+ IT+++VL+ C GMI +G+ F+SM K++ I P +HY+CMVD+LGR G L EA E
Sbjct: 361 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 420
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
+ +P V ++LLGACR+HGN E+G A+ +++ EP +Y+L+SNL+A G
Sbjct: 421 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 480
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
W+ V +RK MK + + KE G SW +V + +H F G+ +HP++ +IY+ + L S++
Sbjct: 481 WKDVVKIRKSMKERNLIKEAGCSWIEVE--NRVHRFHVGETSHPQAWQIYQELDQLASKI 538
Query: 636 K 636
K
Sbjct: 539 K 539
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 246/440 (55%), Gaps = 18/440 (4%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + ++V+W +++ F + + DA+ L M L G V D TYS+ LS C +
Sbjct: 12 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW---GRLVEARRVFDEMPNKDSVSWNAI 129
G QLHS +++ GL +V VG +L+ MY++ G + ++R+VF++MP + +SW AI
Sbjct: 72 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131
Query: 130 LSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
++ Y Q G+ EAI +M+ +R +H SF+S ACG+ + G+Q++ ++K+G
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFK 244
+ VGN L+S Y++ DA K F + ++N++S+ ++ ++ E+A LF
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251
Query: 245 EMRLDGVCPNDVTFIGLIH-AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
E+ G+ + TF L+ A SIG + K G IHG +K + S +CN LI+MY+R
Sbjct: 252 EIADTGIGISAFTFASLLSGAASIGAMGK-GEQIHGRLLKGGYKSNQCICNALISMYSRC 310
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVL 362
+++ + +VF+E+ R +ISW ++I+G+A++G + A++ F +++ +KPN T+ +VL
Sbjct: 311 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 370
Query: 363 NAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
+A IS GQ+ + + K G+ + ++D+ G+ G + E+ N
Sbjct: 371 SACSHVGMIS--EGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 428
Query: 422 SE-FAWTAIISALARHGDYE 440
++ W ++ A HG+ E
Sbjct: 429 ADALVWRTLLGACRVHGNTE 448
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 106/198 (53%), Gaps = 11/198 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY +SG+ + A F+ L ++VS+N ++ G+ KS++A + G+ A
Sbjct: 203 ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISA 262
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ LS G Q+H ++K G S + NALI+MYSR G + A +VF+E
Sbjct: 263 FTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNE 322
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH------ 171
M +++ +SW ++++G+ + G + A+ +M+ G + + +++ + SAC H
Sbjct: 323 MEDRNVISWTSMITGFAKHG-FATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 381
Query: 172 -EKNLELGKQIHGVSIKM 188
+K+ + HG+ +M
Sbjct: 382 GQKHFNSMYKEHGIVPRM 399
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY + G + A +FN + + +++SW ++++GF K + AL +M G +
Sbjct: 304 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 363
Query: 58 VTYSTALSFCLDHEGFLFGLQLH--SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+TY LS C H G + Q H S+ + G+ + ++ + R G LVEA
Sbjct: 364 ITYVAVLSAC-SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 422
Query: 116 DEMP-NKDSVSWNAILS-----GYTQDGDYGVEAIL 145
+ MP D++ W +L G T+ G + E IL
Sbjct: 423 NSMPLMADALVWRTLLGACRVHGNTELGRHAAEMIL 458
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/561 (34%), Positives = 321/561 (57%), Gaps = 19/561 (3%)
Query: 86 FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
FG D + + N LI MY + GRL A VFD M ++ VSW A++ G+ Q+G+ +E++L
Sbjct: 3 FGFD--LMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGN-PLESLL 59
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
+M G++ + +F++ ACG L++G+QIH + +K G+ VGN ++ YS
Sbjct: 60 LFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYS 119
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIG 260
KC +A +F M RN+ISW MI+ E A+ LF++M+ G ++ TF
Sbjct: 120 KCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTS 179
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFL--SEPSVCNCLITMYARFESMQDSEKVFDELSC 318
+ A S +KEG IH I FL +V LI +Y + + + +VF +
Sbjct: 180 TLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEE 239
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISL-KH 375
+ +ISW ALI GYAQ G +LA F ++ES + + + S++ G D +L +
Sbjct: 240 KHVISWTALILGYAQEG-NLAESMELFRQLRESSIQVDGFILSSMM---GVFADFALVQQ 295
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G++ H+ IKV D V +++LDMY K G I E++R+F+E ++ +WT +I+ +
Sbjct: 296 GKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGK 355
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
HG + + F EM+ PD +T+L+VL C +G++ KG+ F + + I+ +
Sbjct: 356 HGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVE 415
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM 555
HY+CMVD+LGR GRL+EA+ LV +P + + Q+LL ACR+HG++E+G+ + L+++
Sbjct: 416 HYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRL 475
Query: 556 EPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGD 615
+ +YV+MSN+YA+ G W+ +R+ +KSK ++KE G SW ++ +H F GD
Sbjct: 476 DSENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEID--KEVHFFYGGD 533
Query: 616 NTHPRSEEIYRMAECLGSEMK 636
+THP +E+I+ + + + MK
Sbjct: 534 DTHPLTEKIHEILKEMERRMK 554
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 238/455 (52%), Gaps = 24/455 (5%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFAL---RMNLIGVVFDAVT 59
MY K G+ A +F+ + ++VSW ++ G ++ + L L +M L GV + T
Sbjct: 16 MYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFT 75
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ST L C G G Q+H + VK G D VGN++I MYS+ GR+ EA +F+ MP
Sbjct: 76 FSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMP 135
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ +SWNA+++GYT G + +A++ +M G LD +FTS AC ++ G
Sbjct: 136 VRNLISWNAMIAGYTVAG-FCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGN 194
Query: 180 QIHGVSIKMG--YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
QIH I G Y + +V L+ Y KC A +VF + +++VISWT +I
Sbjct: 195 QIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQ 254
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N +++ LF+++R + + ++ + LV++G+ +H IK + SV
Sbjct: 255 EGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISV 314
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
CN ++ MY + + ++E++F E+ R +ISW +I+GY ++GL A++ F + + +
Sbjct: 315 CNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDST 374
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQR-----CHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+P+ T+ +VL +G + ++ GQ C H IK ++ + ++D+ G+ G
Sbjct: 375 EPDDVTYLAVL--LGCSHSGLVEKGQEYFSRLCSYHGIKARVEHY----ACMVDLLGRAG 428
Query: 407 SIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ E++ + + ++ W ++SA HGD E
Sbjct: 429 RLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLE 463
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 180/346 (52%), Gaps = 17/346 (4%)
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSL 242
MG+G + + N L+ Y KC G A VF RM RNV+SWT ++ + N +++ L
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
F +M L GV PND TF + A + N + GR IH +C+KT F V N +I MY++
Sbjct: 61 FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP--NAYTFGS 360
+ ++ +F+ + R +ISWNA+I+GY G A+ F ++E + +TF S
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKAL-VLFQKMQEVGGFLDEFTFTS 179
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGL--DSDPIVGSALLDMYGKRGSIFESQRVFNET 418
L A ++ ++K G + H+ +I G + V AL+D+Y K G +F ++RVF+
Sbjct: 180 TLKA--CSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHI 237
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+EK +WTA+I A+ G+ M F+++ ++ D S++ V ++ +G+
Sbjct: 238 EEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGK 297
Query: 479 HLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIPG 522
+ +K + D C ++DM + G + EAE L ++P
Sbjct: 298 QMHAFAIK---VPSGVDISVCNSILDMYLKCGMINEAERLFSEMPA 340
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 179/348 (51%), Gaps = 15/348 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G+ ++A C+F + +++SWN +++G+ + + AL +M +G D
Sbjct: 115 IDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDE 174
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEV--YVGNALITMYSRWGRLVEARRVF 115
T+++ L C D G Q+H+ ++ G V V ALI +Y + G+L ARRVF
Sbjct: 175 FTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVF 234
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ K +SW A++ GY Q+G+ E++ ++ +++D +S +
Sbjct: 235 SHIEEKHVISWTALILGYAQEGNLA-ESMELFRQLRESSIQVDGFILSSMMGVFADFALV 293
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
+ GKQ+H +IK+ G +SV N ++ Y KC + +A ++F M RNVISWT MI+
Sbjct: 294 QQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGY 353
Query: 234 ----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR-MIHGLCIKTNFLS 288
+ +E A+ LF EM+LD P+DVT++ ++ S LV++G+ LC +
Sbjct: 354 GKHGLGKE-AIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKA 412
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNG 335
C++ + R +++++ + D + + W L+S +G
Sbjct: 413 RVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 337/615 (54%), Gaps = 30/615 (4%)
Query: 29 NTVLSGFEKSD-DALSFALRMNLIGVVF----DAVTYSTALSFCLDHEGFLFGLQLHSLI 83
NT+++ F ++ L+F L +++ + D T+ + + + QLH+
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS---AAQLHACA 93
Query: 84 VKFGL-DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVE 142
++ GL V+ +L+ Y R+GR+ EA +VFDEM +D +WNA+LSG ++ E
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNAR-AAE 152
Query: 143 AILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMS 202
A+ M+ +G+ D V+ +S C + L +H ++K G + V N L+
Sbjct: 153 AVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALID 212
Query: 203 TYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVT 257
Y K + +A VF M R++++W ++IS + A+ +F+ MR GV P+ +T
Sbjct: 213 VYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLT 272
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC-NCLITMYARFESMQDSEKVFDEL 316
+ L AI+ G + + +H ++ + + + N ++ MYA+ +++ ++++FD +
Sbjct: 273 LVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSM 332
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAY--TFGSVLNA---VGAAEDI 371
++ +SWN LI+GY QNGL+ AV+ + + K A TF SVL A +GA
Sbjct: 333 PVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGA---- 388
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
L+ G R H+ IK+GL+ D VG+ L+D+Y K G + E+ +F + +S W AIIS
Sbjct: 389 -LQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIIS 447
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
L HG + F M+ +G++PD +TF+S+L C G++ +GR FD M Y I
Sbjct: 448 GLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIV 507
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
P HY+CM DMLGR G+L+EA + +P P +V +LLGACRIHGNVEMG+ +
Sbjct: 508 PIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQN 567
Query: 552 LMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGF 611
L +++P G YVLMSN+YA+ G W+ V +R ++ + ++K G W+ + ++ F
Sbjct: 568 LFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPG--WSSIEVKRSVNVF 625
Query: 612 SSGDNT--HPRSEEI 624
SG+ T HP+ EEI
Sbjct: 626 YSGNQTEPHPQHEEI 640
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 225/455 (49%), Gaps = 20/455 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++ Y + G+ +A +F+ ++ D+ +WN +LSG ++ +A+ RM GV D
Sbjct: 110 VHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDT 169
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT S+ L C+ + L +H VK GLD E++V NALI +Y + G L EA+ VF
Sbjct: 170 VTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHG 229
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M +D V+WN+I+SG Q G A L + + MR G+ D ++ S ASA +
Sbjct: 230 MECRDLVTWNSIISGCEQRGQ--TAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGR 287
Query: 177 LGKQIHGVSIKMGYGT-HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
K +H ++ G+ + GN ++ Y+K A ++F M ++ +SW T+I+
Sbjct: 288 SAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGY 347
Query: 236 RE-----DAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ +AV + M + +G+ TF+ ++ A S +++G +H L IK +
Sbjct: 348 MQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVD 407
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V CLI +YA+ + ++ +F+++ R WNA+ISG +G A+ F + +
Sbjct: 408 VYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQ 467
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRG 406
E KP+ TF S+L A A L R +++V D PI + + DM G+ G
Sbjct: 468 EGIKPDHVTFVSLLAACSHA---GLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAG 524
Query: 407 SIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ E+ K + A W A++ A HG+ E
Sbjct: 525 QLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVE 559
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 203/620 (32%), Positives = 325/620 (52%), Gaps = 79/620 (12%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
V+ N +++ Y++ GRL EA RVF+EMP DSVSW A++ GY Q G + AI EM+
Sbjct: 79 VFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFE-NAIGMFREMV 137
Query: 152 RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
+ + T+ ++C + L +G+++H +K G +++SV N L++ Y+K
Sbjct: 138 SDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPV 197
Query: 212 DANKVFRRMH-------------------------------DRNVISWTTMIS------M 234
A VF RM +R+V+SW MIS
Sbjct: 198 TAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGF 257
Query: 235 NREDAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+RE A+ +F +M +D P+ T + A + +K G+ IH I+T F + +V
Sbjct: 258 DRE-ALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVG 316
Query: 294 NCLITMYAR-----------------------FESMQD----------SEKVFDELSCRE 320
N LI+MY++ F ++ D + ++FD L R+
Sbjct: 317 NALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRD 376
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRC 379
+++W A+I GY QNG + A++ F +IKE KPN YT ++L+ + SL HG++
Sbjct: 377 VVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLA--SLDHGRQI 434
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGD 438
H+ + G S V +AL+ MY K GSI +++ VFN K + WT++I ALA+HG
Sbjct: 435 HASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGL 494
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS 498
E + F+ M G++PD IT++ VL+ C G++ +GR ++ M + I P+P HY+
Sbjct: 495 GEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYA 554
Query: 499 CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPA 558
CM+D+ GR G L+EA + +P P + SLL +C++H NVE+ E A+ L+ +EP
Sbjct: 555 CMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPE 614
Query: 559 GSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTH 618
SG+Y ++N+Y+ G WE A +RK MK KGV+K+ GFSW + + +H F D H
Sbjct: 615 NSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIK--NKVHIFGVDDGLH 672
Query: 619 PRSEEIYRMAECLGSEMKYL 638
P+ + IY M + E+K +
Sbjct: 673 PQRDAIYEMMAKIWKEIKKM 692
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 240/516 (46%), Gaps = 84/516 (16%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y K G+ ++A +F + PD VSW ++ G+ + ++A+ M V T
Sbjct: 89 YAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTL 148
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD---- 116
+ L+ C E G ++HS +VK GL S + V N+L+ MY++ G V A+ VFD
Sbjct: 149 TNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKL 208
Query: 117 ---------------------------EMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
+M +D VSWNA++SGY Q G + EA+ +
Sbjct: 209 KSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHG-FDREALDIFSK 267
Query: 150 M-MRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK-- 206
M M + D + SA SAC + +NL+LGKQIH I+ + T +VGN L+S YSK
Sbjct: 268 MLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSG 327
Query: 207 -CEVT---------------------------GDAN---KVFRRMHDRNVISWTTMI--- 232
E+ GD N ++F + R+V++WT MI
Sbjct: 328 GVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGY 387
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +DA+ LF+ M +G PN+ T ++ S + GR IH ++ S
Sbjct: 388 VQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSV 447
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSC-REIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N LITMYA+ S+ D+ VF+ + R+ I+W ++I AQ+GL A+ F +++
Sbjct: 448 SVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLE 507
Query: 350 ES-KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
KP+ T+ VL+A VG E + ++H I P + ++D++G+
Sbjct: 508 NGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKII----PTPSHYACMIDLFGRA 563
Query: 406 GSIFESQR-VFNETQEKSEFAWTAIISALARHGDYE 440
G + E+ + N E AW +++++ H + E
Sbjct: 564 GLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVE 599
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 211/415 (50%), Gaps = 49/415 (11%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNL-IGVVFDAVT 59
+ +SG D A F + D+VSWN ++SG+ + +AL +M + D T
Sbjct: 221 HMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFT 280
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWG------RLVE--- 110
++ALS C + E G Q+H+ I++ D+ VGNALI+MYS+ G +++E
Sbjct: 281 LASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSM 340
Query: 111 ------------------------ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILA 146
ARR+FD + +D V+W A++ GY Q+G + +A+
Sbjct: 341 ISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNG-FNQDAMEL 399
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
M+++G + ++ + + S +L+ G+QIH + + G + VSV N L++ Y+K
Sbjct: 400 FRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAK 459
Query: 207 CEVTGDANKVFRRMH-DRNVISWTTM-ISMNR----EDAVSLFKEMRLDGVCPNDVTFIG 260
DA VF +H R+ I+WT+M I++ + E+A++LF+ M +G+ P+ +T++G
Sbjct: 460 SGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVG 519
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTN-FLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
++ A + LV++GR + L + + PS C+I ++ R +Q++ + +
Sbjct: 520 VLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIE 579
Query: 320 -EIISWNALI-SGYAQNGLSLAAVQA-FFGVIKESKPNAYT-FGSVLNAVGAAED 370
++I+W +L+ S + LA V A +I+ AY+ +V +A G E+
Sbjct: 580 PDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWEN 634
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 176/392 (44%), Gaps = 80/392 (20%)
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK IH IK G V + N LM+ Y+K DA++VF M ++V SW ++S
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 234 ----------------------------MNR----EDAVSLFKEMRLDGVCPNDVTFIGL 261
N+ E+A+ +F+EM D V P T +
Sbjct: 92 GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR----------FESMQ---- 307
+ + + + GR +H +K S SV N L+ MYA+ F+ M+
Sbjct: 152 LASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKST 211
Query: 308 ----------------DSEKV-FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
D +V F+++ R+++SWNA+ISGY Q+G A+ F ++ +
Sbjct: 212 SSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMD 271
Query: 351 --SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
SKP+ +T S L+A E+ LK G++ H+HII+ D+ VG+AL+ MY K G +
Sbjct: 272 SSSKPDKFTLASALSACANLEN--LKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGV 329
Query: 409 FESQRVFNET--QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+Q++ ++ A+TA++ + GD F + + D + + +++
Sbjct: 330 EIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVR----DVVAWTAMIV 385
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS 498
+NG LF SM+K+ P P++Y+
Sbjct: 386 GYVQNGFNQDAMELFRSMIKE---GPKPNNYT 414
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 205/636 (32%), Positives = 340/636 (53%), Gaps = 17/636 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----SDDALSFALRMNLIGVVFD 56
+ M+ G+ A +F+ + D +S N ++S + S L F+ M G+ D
Sbjct: 187 ITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFS-DMRHHGLRPD 245
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
A T + +S C + F G +HSL ++ LDS V V NAL+ MYS G+L +A +F
Sbjct: 246 ATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 305
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +D +SWN ++S Y Q+ + +A+ L ++ +H++F+SA AC L
Sbjct: 306 NMSRRDLISWNTMISSYVQNCN-STDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALI 364
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GK +H + +++ ++ VGN L++ Y KC DA KVF+ M +V+S+ +I
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYA 424
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN-LVKEGRMIHGLCIKTNFLSEP 290
+ A+ +F +R G+ PN +T I + + + N L GR +H I+T FLS+
Sbjct: 425 VLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDE 484
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N LITMYA+ +++ S +F+ ++ + I+SWNA+I+ AQ G A++ F +
Sbjct: 485 YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHA 544
Query: 351 -SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+K + L++ A SL+ G + H +K GLDSD V +A +DMYGK G +
Sbjct: 545 GNKLDRVCLAECLSS--CASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMN 602
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E ++ + + + W +IS A++G ++ FK+M G +PD +TF+++L+ C
Sbjct: 603 EMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACS 662
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ KG ++SM + + P H C+VD+LGR+GR EAE + ++P P +
Sbjct: 663 HAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIW 722
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+SLL + R H N+E+G + A L++++P +YVL+SNLYA W V LR MK+
Sbjct: 723 RSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTI 782
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+ K SW + + + F GD H +E+IY
Sbjct: 783 NINKRPACSWLKLK--NEVSTFGIGDRGHKHAEKIY 816
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/526 (29%), Positives = 264/526 (50%), Gaps = 12/526 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y G A +F + ++VSW ++ + ++ L +M GV +A
Sbjct: 86 LHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNA 145
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++T +S C E + GLQ+ S ++ GL ++V V N+LITM+ GR+ +A ++FD
Sbjct: 146 NAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDR 205
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D++S NA++S Y+ G + L +M GLR D + S S C +
Sbjct: 206 MEEHDTISRNAMISMYSHQG-ICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSH 264
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G IH + ++ + V+V N L++ YS DA +F M R++ISW TMIS
Sbjct: 265 GSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQ 324
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N DA+ ++ PN +TF + A S + +G+M+H + ++ + V
Sbjct: 325 NCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLV 384
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LITMY + SM+D+EKVF + +++S+N LI GYA A+Q F +
Sbjct: 385 GNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGI 444
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN T ++ + ++ D+ +G+ H++II+ G SD V ++L+ MY K G++ S
Sbjct: 445 KPNYITMINIHGSFTSSNDLH-NYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS 503
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+FN K+ +W AII+A A+ G E + F +M++ G + D + L+ C
Sbjct: 504 TNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASL 563
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
+ +G L +K ++ + +DM G+ G++ E ++V
Sbjct: 564 ASLEEGMQLHGLGMKS-GLDSDSYVVNAAMDMYGKCGKMNEMLQMV 608
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 251/509 (49%), Gaps = 21/509 (4%)
Query: 27 SWNTVLSGFEK-SDDALSFALR--MNLIGVVFDAVTYSTALSFCLDH---EGFLFGLQLH 80
+W T +SG + D +F L M GV ++ ++ C EG G +H
Sbjct: 8 TWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIH 67
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
+L + GL VY+G AL+ +Y G + +ARR+F EMP ++ VSW A++ + +G Y
Sbjct: 68 ALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNG-YL 126
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
E + A +M R+G+ + +F + S CG +N G Q+ I G VSV N L
Sbjct: 127 EETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSL 186
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFKEMRLDGVCPND 255
++ + DA K+F RM + + IS MISM + +F +MR G+ P+
Sbjct: 187 ITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDA 246
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
T L+ + + G IH LC++++ S +V N L+ MY+ + D+E +F
Sbjct: 247 TTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWN 306
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLK 374
+S R++ISWN +IS Y QN S A++ + ++ PN TF S L A + +L
Sbjct: 307 MSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPG--ALI 364
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G+ H+ ++++ L + +VG++L+ MYGK S+ ++++VF ++ +I A
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYA 424
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVL-TVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
D M F + + G++P+ IT +++ + N + + GR L +++ +
Sbjct: 425 VLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLS-- 482
Query: 494 PDHY--SCMVDMLGRVGRLEEAEELVGQI 520
D Y + ++ M + G LE + + I
Sbjct: 483 -DEYVANSLITMYAKCGNLESSTNIFNSI 510
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 321/563 (57%), Gaps = 23/563 (4%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G Q+H ++K G + N LI MY + + A +VFD MP ++ VSW+A++SG+
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 136 DGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
+GD ++ L+L EM R+G+ + +F++ ACG LE G QIHG +K+G+ V
Sbjct: 85 NGD--LKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMV 142
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--------MNREDAVSLFKEM 246
VGN L+ YSKC +A KVFRR+ DR++ISW MI+ D + +E
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF--LSEPSVCNCLITMYARFE 304
+ P++ T L+ A S ++ G+ IHG +++ F S ++ L+ +Y +
Sbjct: 203 NIKER-PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVL 362
+ + K FD++ + +ISW++LI GYAQ G + A+ F ++E S+ +++ S+
Sbjct: 262 YLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM-GLFKRLQELNSQIDSFALSSI- 319
Query: 363 NAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
+G D +L + G++ + +K+ + V ++++DMY K G + E+++ F E Q K
Sbjct: 320 --IGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK 377
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+WT +I+ +HG + + F EM + PD + +L+VL+ C +GMI +G LF
Sbjct: 378 DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELF 437
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+L+ + I+P +HY+C+VD+LGR GRL+EA+ L+ +P P + + Q+LL CR+HG+
Sbjct: 438 SKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 497
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
+E+G+ + L++++ +YV+MSNLY + G W R+ KG++KE G SW +
Sbjct: 498 IELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVE 557
Query: 602 VGDIDGLHGFSSGDNTHPRSEEI 624
+ +H F SG+++HP + I
Sbjct: 558 IE--REVHFFRSGEDSHPLTPVI 578
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 235/455 (51%), Gaps = 18/455 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MYCK + A +F+++ ++VSW+ ++SG + D +LS M G+ +
Sbjct: 48 IDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNE 107
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ST L C GLQ+H +K G + V VGN+L+ MYS+ GR+ EA +VF
Sbjct: 108 FTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRR 167
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL--RLDHVSFTSAASACGHEKNL 175
+ ++ +SWNA+++G+ G YG +A+ M + R D + TS AC +
Sbjct: 168 IVDRSLISWNAMIAGFVHAG-YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 226
Query: 176 ELGKQIHGVSIKMGY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
GKQIHG ++ G+ + ++ L+ Y KC A K F ++ ++ +ISW+++I
Sbjct: 227 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 286
Query: 234 MNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ +A+ LFK ++ + +I + L+++G+ + L +K
Sbjct: 287 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 346
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
E SV N ++ MY + + ++EK F E+ +++ISW +I+GY ++GL +V+ F+ ++
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRG 406
+ + +P+ + +VL+A + I K G+ S +++ G+ + ++D+ G+ G
Sbjct: 407 RHNIEPDEVCYLAVLSACSHSGMI--KEGEELFSKLLETHGIKPRVEHYACVVDLLGRAG 464
Query: 407 SIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ E++ + + K W ++S HGD E
Sbjct: 465 RLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIE 499
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 195/374 (52%), Gaps = 21/374 (5%)
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+ S C + + G Q+H +K G G ++ N L+ Y KC A KVF M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 221 HDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
+RNV+SW+ ++S + + ++SLF EM G+ PN+ TF + A + N +++G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
IHG C+K F V N L+ MY++ + ++EKVF + R +ISWNA+I+G+ G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 336 LSLAAVQAFFGVIKES----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL--D 389
A+ FG+++E+ +P+ +T S+L A + I G++ H +++ G
Sbjct: 188 YGSKALDT-FGMMQEANIKERPDEFTLTSLLKACSSTGMIYA--GKQIHGFLVRSGFHCP 244
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
S + +L+D+Y K G +F +++ F++ +EK+ +W+++I A+ G++ M FK +
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCM---VDMLGR 506
+ + DS S++ V ++ +G+ + +K PS S + VDM +
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK----LPSGLETSVLNSVVDMYLK 360
Query: 507 VGRLEEAEELVGQI 520
G ++EAE+ ++
Sbjct: 361 CGLVDEAEKCFAEM 374
>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1005
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 207/638 (32%), Positives = 355/638 (55%), Gaps = 22/638 (3%)
Query: 1 MNMYCKSGQFDKALCIFN-NLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFD 56
++MY K+ A +F+ + D V WN++LS + KS + L M + G +
Sbjct: 204 VSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASN 263
Query: 57 AVTYSTALSFCLDHEGFLF---GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
+ T +AL+ C EGF + G ++H+ ++K EVYV NALI MY+R G+++EA R
Sbjct: 264 SYTIVSALTAC---EGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGR 320
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
+ M N D V+WN+++ GY Q+ Y EA+ +M+ G + D VS TS +A G
Sbjct: 321 ILRLMNNADVVTWNSLIKGYVQNLMYK-EALQFFCDMIAAGHKPDEVSLTSVIAASGRLS 379
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
NL G ++H IK G+ +++ VGN L+ YSKC +T + F MH++++ISWTT+I+
Sbjct: 380 NLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIA 439
Query: 234 ---MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+N +A+ LF+++ + +++ ++ A S+ + + IH ++ +
Sbjct: 440 GYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLI- 498
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ + N L+ +Y + +M + +VF+ + ++++SW ++IS A NG AV+ F +
Sbjct: 499 DTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVE-LFRRM 557
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E+ A + + AA +LK G+ H ++++ G + + A++DMY G +
Sbjct: 558 AETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDL 617
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ VF+ + K +T++I+A HG ++ + F +M ++ V PD I+FL++L C
Sbjct: 618 QSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYAC 677
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +GR M +Y +EP P+HY C+VDMLGR + EA E V + P V
Sbjct: 678 SHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTTEV 737
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LL ACR H E+GE A L+++EP G+ VL+SN++AE+G W V +R MK+
Sbjct: 738 WCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKA 797
Query: 589 KGVRKEVGFSWADVGDIDG-LHGFSSGDNTHPRSEEIY 625
G+ K G SW ++DG +H F++ D +HP ++EIY
Sbjct: 798 SGMEKHPGCSWI---EMDGKVHKFTARDKSHPETKEIY 832
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/537 (28%), Positives = 272/537 (50%), Gaps = 20/537 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDDALS--FALR-MNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + + +WN ++ + + + S F R M + GV D ++ L C
Sbjct: 118 VFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLRD 177
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK-DSVSWNAILS 131
G +LH ++VK G +S ++ NAL++MY++ L A+R+FD K D+V WN+ILS
Sbjct: 178 IRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILS 237
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
Y+ G +E + EM G + + SA +AC +LGK+IH +K +
Sbjct: 238 SYSTSGK-SLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHS 296
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEM 246
V V N L++ Y++C +A ++ R M++ +V++W ++I ++ ++A+ F +M
Sbjct: 297 FEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDM 356
Query: 247 RLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
G P++V+ +I A + NL+ G +H IK + S V N LI MY++
Sbjct: 357 IAAGHKPDEVSLTSVIAASGRLSNLLA-GMELHAYVIKHGWDSNLLVGNTLIDMYSKCNL 415
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
+ F + +++ISW +I+GYA N + A+Q F V K+ + + GS+L A
Sbjct: 416 TCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRA 475
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+ + + + H HI++ GL D ++ + L+D+YGK ++ + RVF + K
Sbjct: 476 CSVLKSMLIV--KEIHCHILRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVV 532
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+WT++IS+ A +G+ + F+ M G+ DS+ L +L+ + KGR + +
Sbjct: 533 SWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYL 592
Query: 485 L-KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
L K + +E S +VDM G L+ A+ + +I GL S++ A +HG
Sbjct: 593 LRKGFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHG 646
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 230/465 (49%), Gaps = 35/465 (7%)
Query: 107 RLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA 166
R + +VFDEM ++ + +WNA++ Y +G+ A+ M +G+ LD SF
Sbjct: 111 RALSQEKVFDEMRDRTAFAWNALIGAYVSNGE-PASALFIYRNMRVEGVPLDLYSFPVLL 169
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NV 225
ACG +++ G ++H + +K+G+ + + N L+S Y+K + A ++F ++ +
Sbjct: 170 KACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDA 229
Query: 226 ISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+ W +++S + + LF+EM++ G N T + + A + K G+ IH
Sbjct: 230 VLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAA 289
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+K+ E VCN LI MYAR M ++ ++ ++ ++++WN+LI GY QN + A
Sbjct: 290 VLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEA 349
Query: 341 VQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
+Q F +I KP+ + SV+ A G + L G H+++IK G DS+ +VG+ L+
Sbjct: 350 LQFFCDMIAAGHKPDEVSLTSVIAASGRLSN--LLAGMELHAYVIKHGWDSNLLVGNTLI 407
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K R F EK +WT II+ A + + + F+++ K + D +
Sbjct: 408 DMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEM 467
Query: 460 TFLSVLTVCG--RNGMIHKGRH-------LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
S+L C ++ +I K H L D+++++ +VD+ G+ +
Sbjct: 468 MLGSILRACSVLKSMLIVKEIHCHILRKGLIDTVIQNE-----------LVDVYGKCRNM 516
Query: 511 EEAEELVGQIPGGPGLSVLQSLLGACRIHGN----VEMGERIADA 551
A + I G +S S++ + ++GN VE+ R+A+
Sbjct: 517 GYASRVFESIKGKDVVS-WTSMISSSALNGNENEAVELFRRMAET 560
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 6/193 (3%)
Query: 384 IKVGLDSDPIVGSA-LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
+ V ++ PI A LL++ GK ++ + ++VF+E ++++ FAW A+I A +G+ S
Sbjct: 88 LDVNGNNSPIEAYAYLLELCGKSRALSQ-EKVFDEMRDRTAFAWNALIGAYVSNGEPASA 146
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
+ ++ M +GV D +F +L CG+ I G L ML + + +V
Sbjct: 147 LFIYRNMRVEGVPLDLYSFPVLLKACGKLRDIRSGTEL-HCMLVKLGFNSTGFIVNALVS 205
Query: 503 MLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG-NVEMGERIADALMKMEPAGSG 561
M + L A+ L + S+L + G ++E + + M+M S
Sbjct: 206 MYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFRE--MQMTGPASN 263
Query: 562 SYVLMSNLYAEKG 574
SY ++S L A +G
Sbjct: 264 SYTIVSALTACEG 276
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 193/541 (35%), Positives = 317/541 (58%), Gaps = 25/541 (4%)
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A +VFD+MP ++ V+W +++ + Q G +AI ++M G D +++S SAC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLG-CARDAIDLFLDMELSGYVPDRFTYSSVLSACT 62
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG---DANKVFRRMHDRNVIS 227
L LGKQ+H I++G V VG L+ Y+KC G D+ KVF +M + NV+S
Sbjct: 63 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 122
Query: 228 WTTMISMNRE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE--GRMIHG 279
WT +I+ + +A+ LF +M + PN +F ++ A GNL G ++
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC--GNLSDPYTGEQVYS 180
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
+K S V N LI+MYAR M+D+ K FD L + ++S+NA++ GYA+N L
Sbjct: 181 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKN---LK 237
Query: 340 AVQAF--FGVIKESKP--NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
+ +AF F I ++ +A+TF S+L+ GAA ++ G++ H ++K G S+ +
Sbjct: 238 SEEAFLLFNEIADTGIGISAFTFASLLS--GAASIGAMGKGEQIHGRLLKGGYKSNQCIC 295
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+AL+ MY + G+I + +VFNE ++++ +WT++I+ A+HG + F +M G +
Sbjct: 296 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 355
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P+ IT+++VL+ C GMI +G+ F+SM K++ I P +HY+CMVD+LGR G L EA E
Sbjct: 356 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 415
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
+ +P V ++LLGACR+HGN E+G A+ +++ EP +Y+L+SNL+A G
Sbjct: 416 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 475
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
W+ V +RK MK + + KE G SW +V + +H F G+ +HP++ +IY+ + L S++
Sbjct: 476 WKDVVKIRKSMKERNLIKEAGCSWIEVE--NRVHRFHVGETSHPQAWQIYQELDQLASKI 533
Query: 636 K 636
K
Sbjct: 534 K 534
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 246/440 (55%), Gaps = 18/440 (4%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + ++V+W +++ F + + DA+ L M L G V D TYS+ LS C +
Sbjct: 7 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW---GRLVEARRVFDEMPNKDSVSWNAI 129
G QLHS +++ GL +V VG +L+ MY++ G + ++R+VF++MP + +SW AI
Sbjct: 67 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126
Query: 130 LSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
++ Y Q G+ EAI +M+ +R +H SF+S ACG+ + G+Q++ ++K+G
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFK 244
+ VGN L+S Y++ DA K F + ++N++S+ ++ ++ E+A LF
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246
Query: 245 EMRLDGVCPNDVTFIGLIH-AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
E+ G+ + TF L+ A SIG + K G IHG +K + S +CN LI+MY+R
Sbjct: 247 EIADTGIGISAFTFASLLSGAASIGAMGK-GEQIHGRLLKGGYKSNQCICNALISMYSRC 305
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVL 362
+++ + +VF+E+ R +ISW ++I+G+A++G + A++ F +++ +KPN T+ +VL
Sbjct: 306 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 365
Query: 363 NAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
+A IS GQ+ + + K G+ + ++D+ G+ G + E+ N
Sbjct: 366 SACSHVGMIS--EGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 423
Query: 422 SE-FAWTAIISALARHGDYE 440
++ W ++ A HG+ E
Sbjct: 424 ADALVWRTLLGACRVHGNTE 443
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 106/198 (53%), Gaps = 11/198 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY +SG+ + A F+ L ++VS+N ++ G+ KS++A + G+ A
Sbjct: 198 ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISA 257
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ LS G Q+H ++K G S + NALI+MYSR G + A +VF+E
Sbjct: 258 FTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNE 317
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH------ 171
M +++ +SW ++++G+ + G + A+ +M+ G + + +++ + SAC H
Sbjct: 318 MEDRNVISWTSMITGFAKHG-FATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 376
Query: 172 -EKNLELGKQIHGVSIKM 188
+K+ + HG+ +M
Sbjct: 377 GQKHFNSMYKEHGIVPRM 394
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY + G + A +FN + + +++SW ++++GF K + AL +M G +
Sbjct: 299 ISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 358
Query: 58 VTYSTALSFCLDHEGFLFGLQLH--SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+TY LS C H G + Q H S+ + G+ + ++ + R G LVEA
Sbjct: 359 ITYVAVLSAC-SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 417
Query: 116 DEMP-NKDSVSWNAILS-----GYTQDGDYGVEAIL 145
+ MP D++ W +L G T+ G + E IL
Sbjct: 418 NSMPLMADALVWRTLLGACRVHGNTELGRHAAEMIL 453
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 208/654 (31%), Positives = 346/654 (52%), Gaps = 24/654 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS---GFEKSDDALSFALRMNLIGVVFDA 57
MN Y K G D A +F+ + D WN ++S E+ D+AL +M L GV +
Sbjct: 181 MNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNK 240
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T AL+ C F L++H+ + D++ V AL+ MY ++G++ +A +F+
Sbjct: 241 GTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFER 300
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +D VSWNA+L+ +G + +A EM+ G +++ + +AC +L+
Sbjct: 301 IQERDVVSWNAMLTANACNG-FHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKH 359
Query: 178 GKQIHGVSIKMGYGTH---VSVGNVLMSTYSKCEVTGDA-NKVFRRMHDRN---VISWTT 230
G + ++++ G G V +G +M+ YS+C+ A + DR+ ++ W T
Sbjct: 360 GDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNT 419
Query: 231 MISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
++S+ E+A ++F+ M L GV + V+ + + +A +++G+ IH L ++
Sbjct: 420 VLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESE 479
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ V N L+TMYAR S++D+ ++FD ++ R +ISW A++ ++Q GL+ A++ F
Sbjct: 480 LTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFR 539
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
++ E PN TF +VLNA G I + K Q C S + G + V + LL G
Sbjct: 540 SILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLS---ETGFFGNVEVANGLLCTLG 596
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K GS+ E F K++ +W I+A A+HG+ + F+ M+ +G+ S+T +
Sbjct: 597 KCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIG 656
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP-G 522
VL+ C G++ +G F +M DY +HYSC++D+L R G LE AEE V ++P G
Sbjct: 657 VLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFG 716
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
+ +LL C++HG++E G R ++ + P +G Y++M NLYA G W A +
Sbjct: 717 DQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAV 776
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
RK M G +KE G SW +V +H F GD +HPRS EI+R E L EMK
Sbjct: 777 RKSMVELGPKKEPGLSWIEVK--GRIHEFRVGDTSHPRSSEIHRELERLNEEMK 828
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 232/474 (48%), Gaps = 19/474 (4%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
DA T++ + C G ++H LI++ G++ ++G L+ MY + G EAR VF
Sbjct: 39 DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ +K V+W +++ + G + EA EM +G+ + V++ + ACGH +
Sbjct: 99 QGIQDKSVVAWTSLIGVNARSG-HPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEV 157
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
+ + V V V +M+ Y KC A VF + R+ W MIS+
Sbjct: 158 DTIRA--RVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLL 215
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++A+ LF++MRL GV PN T + ++A E IH + ++
Sbjct: 216 VAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADT 275
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V L+ MY +F + D+E++F+ + R+++SWNA+++ A NG A + F ++
Sbjct: 276 VVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLV 335
Query: 351 SK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK--VGLDS-DPIVGSALLDMYGK-- 404
+ P+ T+ ++LNA A LKHG + ++ G++S D ++G+A+++MY +
Sbjct: 336 GELPSRITYVAILNACFLAAH--LKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCK 393
Query: 405 -RGSIFESQRVFNETQEK-SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
S F S + + +++ S W ++S + +E F+ M GV D+++ +
Sbjct: 394 SPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLM 453
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+V CG + + KG+ + S+L + + + +V M R+G LE+A E+
Sbjct: 454 TVFNACGSSASLEKGKWI-HSLLTESELTRKTPVQNALVTMYARLGSLEDAREI 506
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 144/590 (24%), Positives = 276/590 (46%), Gaps = 34/590 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MYCK G ++A +F + + +V+W +++ +S +A M L GV+ +
Sbjct: 82 LAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPND 141
Query: 58 VTYSTALSFCLDHEGFLFGLQ-LHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVF 115
VTY L C G + + + + + G L+ +V V A++ Y + G L A VF
Sbjct: 142 VTYVAVLGAC----GHPWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVF 197
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D + +D+ WNA++S + G EA+ +M G+ + + +A +AC H ++
Sbjct: 198 DGILVRDAAVWNAMISLLVAH-EQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDF 256
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+IH + ++ V L++ Y K DA ++F R+ +R+V+SW M++ N
Sbjct: 257 SEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTAN 316
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A F+EM L G P+ +T++ +++A + +K G + L ++ E
Sbjct: 317 ACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIES 376
Query: 291 ---SVCNCLITMYARFESMQDS-------EKVFDELSCREIISWNALISGYAQNGLSLAA 340
+ ++ MY+R +S + + E+ D+ S I+ WN ++S Y +N A
Sbjct: 377 VDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPS---IMMWNTVLSLYVENEQFEEA 433
Query: 341 VQAF-FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F ++ + + +V NA G++ SL+ G+ HS + + L V +AL+
Sbjct: 434 FTIFRLMLLGGVTIDTVSLMTVFNACGSSA--SLEKGKWIHSLLTESELTRKTPVQNALV 491
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
MY + GS+ +++ +F+ ++ +WTA++ ++ G + F+ + +GV P+ +
Sbjct: 492 TMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEV 551
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
TF +VL CG I + L + L + + + + ++ LG+ G LEE Q
Sbjct: 552 TFTAVLNACGNLASIPAAK-LVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFF-Q 609
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNL 569
+ + + A HGN G + M++E +GS L+ L
Sbjct: 610 VMAVKNQVSWNTAIAANAQHGNGVRGVELFQT-MQLEGIDTGSVTLIGVL 658
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 205/641 (31%), Positives = 348/641 (54%), Gaps = 20/641 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN-PDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFD 56
+ MY K G D AL +F + + D+ SWN+ +SG ++ +AL RM G +
Sbjct: 205 VGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMN 264
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ T L C + G +LH+ ++K G + + NAL+ MY+R G + A RVF
Sbjct: 265 SYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVMYARCGWVDSALRVFR 323
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E+ +KD +SWN++LS Y Q+ Y EAI EM++ G DH S SA GH L
Sbjct: 324 EIGDKDYISWNSMLSCYVQNRLYA-EAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLI 382
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
G+++H ++K + + + N LM Y KC + +VF RM ++ +SWTT+I
Sbjct: 383 NGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYA 442
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
S +A+ F+ + +G+ + + ++ A S + + +H I+ L +
Sbjct: 443 QSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLL-DLI 501
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ N +I +Y + + +F+ L ++I++W ++++ +A+NGL AV A FG + +
Sbjct: 502 LKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAV-ALFGKMLNA 560
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+P++ +L A+ SL G+ H +I+ + V S+L+DMY GS+
Sbjct: 561 GIQPDSVALVGILGAIAGLS--SLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMN 618
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ +VF+E + K WTA+I+A HG + + FK M GV PD ++FL++L C
Sbjct: 619 YALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACS 678
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+ ++ +G+ D M+ Y ++P +HY+C+VD+LGR G+ EEA + + +P P V
Sbjct: 679 HSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVW 738
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+LLGACRIH N E+ D L+++EP G+YVL+SN++AE G W V +R M +
Sbjct: 739 CALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQ 798
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY-RMAE 629
G+RK+ SW ++G+ +H F++ D++H S+ I+ ++AE
Sbjct: 799 GLRKDPACSWIEIGNT--VHTFTARDHSHRDSQAIHLKLAE 837
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 212/410 (51%), Gaps = 24/410 (5%)
Query: 76 GLQLHSLIVK---FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G QLH+ V G D ++ L+ MY + GRL +A R+FD MP + SWNA++
Sbjct: 74 GRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGA 133
Query: 133 YTQDGDYGVEAILALIEMMRK-----GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
G G EA+ + MR G D + S ACG E + G ++HG+++K
Sbjct: 134 CLSSGGAG-EAV-GVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVK 191
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMISMNRE-----DAVS 241
G V N L+ Y+KC + A +VF M D R+V SW + IS + +A+
Sbjct: 192 SGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALD 251
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV-CNCLITMY 300
LF+ M+ DG N T +G++ + + GR +H +K +E ++ CN L+ MY
Sbjct: 252 LFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCG--TEFNIQCNALLVMY 309
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTF 358
AR + + +VF E+ ++ ISWN+++S Y QN L A+ FFG + ++ P+
Sbjct: 310 ARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAID-FFGEMVQNGFNPDHACI 368
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
S+L+AVG L +G+ H++ +K LDSD + + L+DMY K S+ S RVF+
Sbjct: 369 VSLLSAVGHLG--RLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRM 426
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ K +WT II+ A+ Y + +F+ + +G++ D + S+L C
Sbjct: 427 RIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEAC 476
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 10/198 (5%)
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL---DSDPIVGSALLDMYGKRG 406
+ P +G VL+ V +S G++ H+H + G D + + LL MYGK G
Sbjct: 50 RAPPPTDHYGWVLDLVAVRRAVS--EGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCG 107
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK----GVRPDSITFL 462
+ ++ R+F+ ++ F+W A+I A G + ++ M G PD T
Sbjct: 108 RLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLA 167
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
SVL CG G G + +K ++ S + +V M + G L+ A + +
Sbjct: 168 SVLKACGAEGDGRCGSEVHGLAVKS-GLDRSTLVANALVGMYAKCGLLDSALRVFEWMRD 226
Query: 523 GPGLSVLQSLLGACRIHG 540
G ++ S + C +G
Sbjct: 227 GRDVASWNSAISGCVQNG 244
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 206/643 (32%), Positives = 336/643 (52%), Gaps = 18/643 (2%)
Query: 9 QFDKALC--IFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTA 63
+FD L +F+ + +IVSWN +++GF D AL M + G+ FDAVT
Sbjct: 209 RFDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVV 268
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
+ C ++ G+QLH L +KF L +++++ NAL+ MYS G L + +F+ +P D+
Sbjct: 269 IQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDA 328
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL-GKQIH 182
WN+++S Y G + EAI I+M + ++ D + S C + + G+ +H
Sbjct: 329 ALWNSMISSYIGFG-FHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLH 387
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNRE 237
++K G +GN L+S Y K A VF +M +VISW TMIS M R
Sbjct: 388 AHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRA 447
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
A LF M + N T + L+ G+ + GR IHG IK S+ L
Sbjct: 448 KAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLT 507
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYT 357
MY + + +F R+++SWN+LIS Y +N + A+ F +I E +PN+ T
Sbjct: 508 EMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVT 567
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIK--VGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
++L + + L GQ H++ + V L+ D + +A + MY + G + ++++F
Sbjct: 568 IINILTSCTQLAHLPL--GQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIF 625
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
Q +S +W A+I+ HG F +M + G +P++++F SVL+ C +G+
Sbjct: 626 CTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTV 685
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
G LF SM++D+ I P HY CMVD+LGR G EA + +P P S+ ++LL +
Sbjct: 686 TGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSS 745
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
C+I N ++ E I L+++EP+ G+++L+SN+YA G W V +RK ++ +G+ K
Sbjct: 746 CQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPP 805
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
G SW +G + +H F++ D HP+SE IY L S ++ L
Sbjct: 806 GTSWIVIG--NQVHHFTATDVLHPQSERIYENLNSLTSLIRDL 846
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 144/504 (28%), Positives = 249/504 (49%), Gaps = 14/504 (2%)
Query: 28 WNTVLSGFEK--SDDA-LSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIV 84
WN+++ K +D A LS +M +G+ D+ T L C G+++HS I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87
Query: 85 KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAI 144
L ++V VG AL+ Y + G + EA +VF EMP +D VSWNA++SGY Y EA+
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYK-EAV 146
Query: 145 LALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG-YGTHVSVGNVLMST 203
L +EM + GL + + + ACG L LG++IHG ++ G + VG L+
Sbjct: 147 LLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGF 206
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNRED---AVSLFKEMRLDGVCPNDVTF 258
Y + + +++VF M RN++SW +I+ +N D A+ L+ M ++G+ + VT
Sbjct: 207 YMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTM 265
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC 318
+ +I A + ++ G +H L IK N +++ + N L+ MY+ S++ S +F+ +
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQ 377
+ WN++IS Y G A+ F + ++ K + T +L+ D S+ G+
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSI-WGR 384
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
H+H +K G++ D +G+ALL MY K I +Q VF + + +W +ISA A+
Sbjct: 385 GLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSM 444
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
F M ++ +S T +S+L C + GR + +K+ +E +
Sbjct: 445 FRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKN-GLEINTSLN 503
Query: 498 SCMVDMLGRVGRLEEAEELVGQIP 521
+ + +M G A + + P
Sbjct: 504 TSLTEMYINCGDERAATNMFTRCP 527
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/531 (26%), Positives = 263/531 (49%), Gaps = 23/531 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ YCK G +A +F + D+VSWN ++SG+ +A+ + M G+ ++
Sbjct: 102 VDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNS 161
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFD 116
T L C + G ++H ++ GL D + YVG AL+ Y R+ V + RVF
Sbjct: 162 RTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDA-VLSHRVFS 220
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M ++ VSWNAI++G+ GD +A+ M+ +G++ D V+ AC L
Sbjct: 221 LMLVRNIVSWNAIITGFLNVGDCA-KALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLR 279
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN- 235
LG Q+H ++IK + + N L++ YS + +F + + W +MIS
Sbjct: 280 LGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYI 339
Query: 236 ----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE----GRMIHGLCIKTNFL 287
+A++LF +MRL+ + DV I ++ +S+ N + + GR +H +K+
Sbjct: 340 GFGFHAEAIALFIKMRLERI-KEDVRTIAIM--LSLCNDLNDGSIWGRGLHAHAMKSGIE 396
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + N L++MY + + ++ VF+++ ++ISWN +IS +AQ+ A + F +
Sbjct: 397 LDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMM 456
Query: 348 IK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ E K N+YT S+L D L G+ H IK GL+ + + ++L +MY G
Sbjct: 457 CESEIKFNSYTIVSLLAFCKDGSD--LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCG 514
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ +F ++ +W ++IS+ ++ + + F M ++ + P+S+T +++LT
Sbjct: 515 DERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILT 573
Query: 467 VCGRNGMIHKGRHLFD-SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
C + + G+ L + ++ +E + + M R G+L+ AE++
Sbjct: 574 SCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKI 624
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 167/366 (45%), Gaps = 15/366 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K Q A +F + D++SWNT++S F +S A L M + F++
Sbjct: 406 LSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNS 465
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L+FC D +FG +H +K GL+ + +L MY G A +F
Sbjct: 466 YTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTR 525
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
P +D VSWN+++S Y ++ + G L L M L + V+ + ++C +L L
Sbjct: 526 CPQRDLVSWNSLISSYIKNDNAG--KALLLFNHMISELEPNSVTIINILTSCTQLAHLPL 583
Query: 178 GKQIHGVSIK--MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
G+ +H + + + S+ N ++ Y++C A K+F + R+++SW MI+
Sbjct: 584 GQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGY 643
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSE 289
DA F +M DG PN+V+F ++ A S L G ++ H + +
Sbjct: 644 GMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQ 703
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNGLSLAAVQAFFGVI 348
+ C++ + R ++ + + S W AL+S Q + ++ FG +
Sbjct: 704 LTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSS-CQIKSNNKLLETIFGKL 762
Query: 349 KESKPN 354
E +P+
Sbjct: 763 VELEPS 768
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 198/650 (30%), Positives = 350/650 (53%), Gaps = 23/650 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVV---FD 56
+Y + A +F + WN +L + K + LS +MN + D
Sbjct: 45 LYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPD 104
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T S AL C + G +H + K +D++++VG+ALI +YS+ G++ +A +VF
Sbjct: 105 NYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFT 164
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM--RKGLRLDHVSFTSAASACGHEKN 174
E P +D V W +I++GY Q+G E LA M + + D V+ SAASAC +
Sbjct: 165 EYPKQDVVLWTSIITGYEQNG--SPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSD 222
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
LG+ +HG + G+ T + + N +++ Y K A +FR M +++ISW++M++
Sbjct: 223 FNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVAC 282
Query: 235 NRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++ A++LF EM + N VT I + A + + ++EG+ IH L + F +
Sbjct: 283 YADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELD 342
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+V L+ MY + S +++ +F+ + ++++SW L SGYA+ G++ ++ F ++
Sbjct: 343 ITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLS 402
Query: 350 E-SKPNAYTFGSVLNAVGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGS 407
++P+A +L A+ ++ + C H+ + K G D++ +G++L+++Y K S
Sbjct: 403 YGTRPDAIALVKIL---AASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSS 459
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLSVLT 466
I + +VF + K W++II+A HG E + F +M N V+P+ +TF+S+L+
Sbjct: 460 IDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILS 519
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G+I +G +F M+ +Y + P+ +HY MVD+LGR+G L++A +++ ++P G
Sbjct: 520 ACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGP 579
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +LLGACRIH N+++GE A L ++P +G Y L+SN+Y +W A LR +
Sbjct: 580 HVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLI 639
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
K +K VG S ++ + +H F + D H S++IY M L + MK
Sbjct: 640 KENRFKKIVGQSMVEIK--NEVHSFIASDRFHGESDQIYGMLRKLDARMK 687
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 231/450 (51%), Gaps = 14/450 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLI-GVVFD 56
+ +Y K GQ + A+ +F D+V W ++++G+E++ + AL+F RM ++ V D
Sbjct: 147 IELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPD 206
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT +A S C F G +H + + G D+++ + N+++ +Y + G + A +F
Sbjct: 207 PVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFR 266
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
EMP KD +SW+++++ Y +G A+ EM+ K + L+ V+ SA AC NLE
Sbjct: 267 EMPYKDIISWSSMVACYADNGA-ETNALNLFNEMIDKRIELNRVTVISALRACASSSNLE 325
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
GK IH +++ G+ ++V LM Y KC +A +F RM ++V+SW + S
Sbjct: 326 EGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYA 385
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E ++ +F M G P+ + + ++ A S +V++ +H K+ F +
Sbjct: 386 EIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEF 445
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ LI +YA+ S+ ++ KVF + +++++W+++I+ Y +G A++ F+ + S
Sbjct: 446 IGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHS 505
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KPN TF S+L+A A I + + H + + L + ++D+ G+ G +
Sbjct: 506 DVKPNDVTFVSILSACSHAGLIE-EGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELD 564
Query: 410 ESQRVFNE-TQEKSEFAWTAIISALARHGD 438
++ + NE + W A++ A H +
Sbjct: 565 KALDMINEMPMQAGPHVWGALLGACRIHQN 594
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 149/535 (27%), Positives = 246/535 (45%), Gaps = 54/535 (10%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLHS +K GL + +V L +Y+R+ L A ++F+E P K WNA+L Y +G
Sbjct: 22 QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81
Query: 138 DYGVEAILALIEMMRKGL---RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
+ VE + +M + R D+ + + A +C + LELGK IHG K +
Sbjct: 82 KW-VETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDM 140
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEM-RL 248
VG+ L+ YSKC DA KVF ++V+ WT++I+ ++ A++ F M L
Sbjct: 141 FVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVL 200
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
+ V P+ VT + A + + GR +HG + F ++ + N ++ +Y + S++
Sbjct: 201 EQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRS 260
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGA 367
+ +F E+ ++IISW+++++ YA NG A+ F +I K + N T S L A +
Sbjct: 261 AANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACAS 320
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
+ + L+ G+ H + G + D V +AL+DMY K S + +FN +K +W
Sbjct: 321 SSN--LEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWA 378
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL------- 480
+ S A G + F M + G RPD+I + +L G++ + L
Sbjct: 379 VLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKS 438
Query: 481 -FD-------SMLKDYHIEPSPDH---------------YSCMVDMLGRVGRLEEAEELV 517
FD S+++ Y S D+ +S ++ G G+ EEA +L
Sbjct: 439 GFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLF 498
Query: 518 GQIPG----GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSN 568
Q+ P S+L AC G +E G +KM Y LM N
Sbjct: 499 YQMSNHSDVKPNDVTFVSILSACSHAGLIEEG-------IKMFHVMVNEYQLMPN 546
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 201/620 (32%), Positives = 334/620 (53%), Gaps = 23/620 (3%)
Query: 24 DIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
D+++WN LS F + + A+ + M V D +T+ LS G Q+H
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
++V+ GLD V VGN LI MY + G + AR VF +M D VSWN ++SG G
Sbjct: 930 GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSG--- 986
Query: 141 VE--AILALIEMMRKGLRLDHVSFTSAASACGH-EKNLELGKQIHGVSIKMGYGTHVSVG 197
+E ++ ++++R GL D + S AC L QIH ++K G V
Sbjct: 987 LEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVS 1046
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM-----ISMNREDAVSLFKEMRLDGVC 252
L+ YSK +A +F ++ SW M +S + A+ L+ M+ G
Sbjct: 1047 TTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGER 1106
Query: 253 PNDVTFIGLIHAISIGNLV--KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
N +T A + G LV K+G+ I + +K F + V + ++ MY + M+ +
Sbjct: 1107 ANQITLANA--AKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESAR 1164
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAE 369
++F+E+ + ++W +ISG +NG A+ + + + + +P+ YTF +++ A
Sbjct: 1165 RIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLL- 1223
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+L+ G++ H++ +K+ DP V ++L+DMY K G+I +++ +F T +W A+
Sbjct: 1224 -TALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAM 1282
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I LA+HG+ E + F+EM+++GV PD +TF+ VL+ C +G++ + F SM K Y
Sbjct: 1283 IVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYG 1342
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
IEP +HYSC+VD L R GR+ EAE+++ +P S+ ++LL ACR+ + E G+R+A
Sbjct: 1343 IEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVA 1402
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
+ L+ +EP+ S +YVL+SN+YA WE VA R M+ V+K+ GFSW D+ + +H
Sbjct: 1403 EKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLK--NKVH 1460
Query: 610 GFSSGDNTHPRSEEIYRMAE 629
F +GD +H ++ IY E
Sbjct: 1461 LFVAGDRSHEETDVIYNKVE 1480
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 146/561 (26%), Positives = 253/561 (45%), Gaps = 54/561 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP--DIVSWNTVLSGF-EKSDDALSFALRMNLIGVVFDA 57
+ MY K G A +F+ + D+V+WN +LS +K+ D + V
Sbjct: 668 ITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKARDGFHLFRLLRRSFVSATR 727
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + CL LH VK GL +V+V AL+ +Y+++GR+ EAR +FD
Sbjct: 728 HTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDG 787
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D V WN ++ Y G EA+L E R GLR D V+ + A ++N+ L
Sbjct: 788 MGLRDVVLWNVMMKAYVDTG-LEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNV-L 845
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
Q+ + YGT + + Y + D VI+W +S +
Sbjct: 846 EWQLKQLK---AYGTKLFM-------YDDDDDGSD------------VIAWNKTLSWFLQ 883
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+AV F +M V + +TF+ ++ ++ N ++ G+ IHG+ +++ SV
Sbjct: 884 RGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSV 943
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
NCLI MY + S+ + VF +++ +++SWN +ISG A +GL +V F +++
Sbjct: 944 GNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGL 1003
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHG----QRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
P+ +T SVL A SL G + H+ +K G+ D V + L+D+Y K G
Sbjct: 1004 LPDQFTVASVLRACS-----SLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGK 1058
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ E++ +F +W A++ GD+ + + M+ G R + IT +
Sbjct: 1059 MEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKA 1118
Query: 468 CGRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
G + +G+ + ++K D + S ++DM + G +E A + +IP
Sbjct: 1119 AGGLVGLKQGKQIQAVVVKRGFNLDLFV------ISGVLDMYLKCGEMESARRIFNEIP- 1171
Query: 523 GPGLSVLQSLLGACRIHGNVE 543
P +++ C +G E
Sbjct: 1172 SPDDVAWTTMISGCVENGQEE 1192
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 201/469 (42%), Gaps = 74/469 (15%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN--KDSVSWNAILSG 132
G + H+ I+ G + ++ N LITMYS+ G L AR++FD P+ +D V+WNAILS
Sbjct: 644 LGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSA 703
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA--------SACGHEKNLELGKQIHGV 184
+ G L ++R+ SF SA C + + +HG
Sbjct: 704 HADKARDGFH----LFRLLRR-------SFVSATRHTLAPVFKMCLLSASPSAAESLHGY 752
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DA 239
++K+G V V L++ Y+K +A +F M R+V+ W M+ + +A
Sbjct: 753 AVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEA 812
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ LF E G+ P+DVT L + V E ++ T M
Sbjct: 813 LLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLF-----------M 861
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTF 358
Y + D +I+WN +S + Q G + AV F +I + TF
Sbjct: 862 YDDDDDGSD------------VIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTF 909
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
+L+ V + L G++ H +++ GLD VG+ L++MY K GS+ ++ VF +
Sbjct: 910 VVMLSVVAGLNCLEL--GKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQM 967
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG------ 472
E +W +IS A G E + F ++ G+ PD T SVL C G
Sbjct: 968 NEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLA 1027
Query: 473 -MIH----KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
IH K + DS + + ++D+ + G++EEAE L
Sbjct: 1028 TQIHACAMKAGVVLDSFVS-----------TTLIDVYSKSGKMEEAEFL 1065
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 150/353 (42%), Gaps = 32/353 (9%)
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD--RNVISWTTM 231
+L LGK+ H + G+ + N L++ YSKC A K+F D R++++W +
Sbjct: 641 DLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAI 700
Query: 232 ISMNRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+S + + D LF+ +R V T + + +HG +K
Sbjct: 701 LSAHADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQW 760
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ V L+ +YA+F ++++ +FD + R+++ WN ++ Y GL A+ F
Sbjct: 761 DVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFN 820
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ +P+ T ++ V + +++ ++ ++ K+ + D GS ++
Sbjct: 821 RTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVI-------- 872
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
AW +S + G+ ++ F +M N V D +TF+ +L+V
Sbjct: 873 -----------------AWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSV 915
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ G+ + +++ ++ +C+++M + G + A + Q+
Sbjct: 916 VAGLNCLELGKQIHGIVVRS-GLDQVVSVGNCLINMYVKTGSVSRARTVFWQM 967
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G + A +F N I SWN ++ G + +++AL F M GV D
Sbjct: 1252 VDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDR 1311
Query: 58 VTYSTALSFCLDHEGFLFGL--QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT+ LS C H G + +S+ +G++ E+ + L+ SR GR+ EA +V
Sbjct: 1312 VTFIGVLSAC-SHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVI 1370
Query: 116 DEMPNKDSVS 125
MP + S S
Sbjct: 1371 SSMPFEASAS 1380
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 205/639 (32%), Positives = 335/639 (52%), Gaps = 21/639 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + + VS+ T++ G+ +S+ +A R++ G + ++T L + E
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G +H ++K G S ++G ALI YS G + AR VFDE+ +KD VSW +++
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Y ++ D EA+ +M G + ++ +F AC +N + GK +H +K Y
Sbjct: 122 YAEN-DCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMR 247
+ VG L+ Y++C DA + F M +VI W+ MIS E A+ +F +MR
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
V PN TF ++ A + + + IHG +K ++ V N L+ YA+ ++
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVG 366
S ++F+ LS R +SWN +I Y Q G A+ F +++ + + T+ S+L A
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRA-- 358
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
A +L+ G + H K D VG+AL+DMY K GSI +++ +F+ + + +W
Sbjct: 359 CATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSW 418
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
AII + HG + F M+ +PD +TF+ VL+ C G + +G+ F SM +
Sbjct: 419 NAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQ 478
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
DY IEP +HY+CMV ++GR G L++A + + IP P + + ++LLGAC IH +VE+G
Sbjct: 479 DYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGR 538
Query: 547 RIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDID 606
A ++++EP S+VL+SN+YA W VA +RK MK KGV+KE G SW + +
Sbjct: 539 ISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSW--IENQG 596
Query: 607 GLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
+H F+ D +H + I M E +LN K +A
Sbjct: 597 NVHCFTVADTSHADLKLINGMLE-------FLNMKTRKA 628
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 241/453 (53%), Gaps = 18/453 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++ Y SG A +F+ +++ D+VSW +++ + ++D +AL F +M + G +
Sbjct: 88 IDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNN 147
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L CL + F G +H ++K + ++YVG L+ +Y+R G +A R F +
Sbjct: 148 FTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGD 207
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D + W+ ++S + Q G +A+ +M R + + +F+S A ++L+L
Sbjct: 208 MPKNDVIPWSFMISRFAQSGQ-SEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDL 266
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
K IHG ++K G T V V N LM+ Y+KC + ++F + DRN +SW T+I
Sbjct: 267 SKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQ 326
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E A+SLF M V +VT+ ++ A + ++ G +H L KT + + +V
Sbjct: 327 LGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAV 386
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI MYA+ S++D+ +FD L R+ +SWNA+I GY+ +GL + A++ F ++KE+
Sbjct: 387 GNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIK-MFNLMKETK 445
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSI 408
KP+ TF VL+A + L G++ + +K +P + + ++ + G+ G++
Sbjct: 446 CKPDELTFVGVLSA--CSNTGRLDEGKQYFTS-MKQDYGIEPCMEHYTCMVWLMGRSGNL 502
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
++ + + E S W A++ A H D E
Sbjct: 503 DQAVKFIEDIPFEPSVMIWRALLGACVIHNDVE 535
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 206/643 (32%), Positives = 336/643 (52%), Gaps = 18/643 (2%)
Query: 9 QFDKALC--IFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTA 63
+FD L +F+ + +IVSWN +++GF D AL M + G+ FDAVT
Sbjct: 209 RFDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVV 268
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
+ C ++ G+QLH L +KF L +++++ NAL+ MYS G L + +F+ +P D+
Sbjct: 269 IQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDA 328
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL-GKQIH 182
WN+++S Y G + EAI I+M + ++ D + S C + + G+ +H
Sbjct: 329 ALWNSMISSYIGFG-FHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLH 387
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNRE 237
++K G +GN L+S Y K A VF +M +VISW TMIS M R
Sbjct: 388 AHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRA 447
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
A LF M + N T + L+ G+ + GR IHG IK S+ L
Sbjct: 448 KAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLT 507
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYT 357
MY + + +F R+++SWN+LIS Y +N + A+ F +I E +PN+ T
Sbjct: 508 EMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVT 567
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIK--VGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
++L + + L GQ H++ + V L+ D + +A + MY + G + ++++F
Sbjct: 568 IINILTSCTQLAHLPL--GQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIF 625
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
Q +S +W A+I+ HG F +M + G +P++++F SVL+ C +G+
Sbjct: 626 CTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTV 685
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
G LF SM++D+ I P HY CMVD+LGR G EA + +P P S+ ++LL +
Sbjct: 686 TGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSS 745
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
C+I N ++ E I L+++EP+ G+++L+SN+YA G W V +RK ++ +G+ K
Sbjct: 746 CQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPP 805
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
G SW +G + +H F++ D HP+SE IY L S ++ L
Sbjct: 806 GTSWIVIG--NQVHHFTATDVLHPQSERIYENLNSLTSLIRDL 846
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/504 (28%), Positives = 249/504 (49%), Gaps = 14/504 (2%)
Query: 28 WNTVLSGFEK--SDDA-LSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIV 84
WN+++ K +D A LS +M +G+ D+ T L C G+++HS I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87
Query: 85 KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAI 144
L ++V VG AL+ Y + G + EA +VF EMP +D VSWNA++SGY Y EA+
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYK-EAV 146
Query: 145 LALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG-YGTHVSVGNVLMST 203
L +EM + GL + + + ACG L LG++IHG ++ G + VG L+
Sbjct: 147 LLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGF 206
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNRED---AVSLFKEMRLDGVCPNDVTF 258
Y + + +++VF M RN++SW +I+ +N D A+ L+ M ++G+ + VT
Sbjct: 207 YMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTM 265
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC 318
+ +I A + ++ G +H L IK N +++ + N L+ MY+ S++ S +F+ +
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQ 377
+ WN++IS Y G A+ F + ++ K + T +L+ D S+ G+
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSI-WGR 384
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
H+H +K G++ D +G+ALL MY K I +Q VF + + +W +ISA A+
Sbjct: 385 GLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSM 444
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
F M ++ +S T +S+L C + GR + +K+ +E +
Sbjct: 445 FRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKN-GLEINTSLN 503
Query: 498 SCMVDMLGRVGRLEEAEELVGQIP 521
+ + +M G A + + P
Sbjct: 504 TSLTEMYINCGDERAATNMFTRCP 527
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/531 (26%), Positives = 263/531 (49%), Gaps = 23/531 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ YCK G +A +F + D+VSWN ++SG+ +A+ + M G+ ++
Sbjct: 102 VDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNS 161
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFD 116
T L C + G ++H ++ GL D + YVG AL+ Y R+ V + RVF
Sbjct: 162 RTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDA-VLSHRVFS 220
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M ++ VSWNAI++G+ GD +A+ M+ +G++ D V+ AC L
Sbjct: 221 LMLVRNIVSWNAIITGFLNVGDCA-KALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLR 279
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN- 235
LG Q+H ++IK + + N L++ YS + +F + + W +MIS
Sbjct: 280 LGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYI 339
Query: 236 ----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE----GRMIHGLCIKTNFL 287
+A++LF +MRL+ + DV I ++ +S+ N + + GR +H +K+
Sbjct: 340 GFGFHAEAIALFIKMRLERI-KEDVRTIAIM--LSLCNDLNDGSIWGRGLHAHAMKSGIE 396
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + N L++MY + + ++ VF+++ ++ISWN +IS +AQ+ A + F +
Sbjct: 397 LDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMM 456
Query: 348 IK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ E K N+YT S+L D L G+ H IK GL+ + + ++L +MY G
Sbjct: 457 CESEIKFNSYTIVSLLAFCKDGSD--LVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCG 514
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ +F ++ +W ++IS+ ++ + + F M ++ + P+S+T +++LT
Sbjct: 515 DERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILT 573
Query: 467 VCGRNGMIHKGRHLFD-SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
C + + G+ L + ++ +E + + M R G+L+ AE++
Sbjct: 574 SCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKI 624
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 167/366 (45%), Gaps = 15/366 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K Q A +F + D++SWNT++S F +S A L M + F++
Sbjct: 406 LSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNS 465
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L+FC D +FG +H +K GL+ + +L MY G A +F
Sbjct: 466 YTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTR 525
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
P +D VSWN+++S Y ++ + G L L M L + V+ + ++C +L L
Sbjct: 526 CPQRDLVSWNSLISSYIKNDNAG--KALLLFNHMISELEPNSVTIINILTSCTQLAHLPL 583
Query: 178 GKQIHGVSIK--MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
G+ +H + + + S+ N ++ Y++C A K+F + R+++SW MI+
Sbjct: 584 GQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGY 643
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSE 289
DA F +M DG PN+V+F ++ A S L G ++ H + +
Sbjct: 644 GMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQ 703
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNGLSLAAVQAFFGVI 348
+ C++ + R ++ + + S W AL+S Q + ++ FG +
Sbjct: 704 LTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSS-CQIKSNNKLLETIFGKL 762
Query: 349 KESKPN 354
E +P+
Sbjct: 763 VELEPS 768
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 197/568 (34%), Positives = 310/568 (54%), Gaps = 23/568 (4%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH L V G ++ +V +AL +Y + R +AR+VFD +P+ D++ WN +L+G
Sbjct: 136 LHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLP---- 191
Query: 139 YGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
G EA+ A + M+ G +R D + S+ A ++ +G+ +HG +K G H V
Sbjct: 192 -GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVV 250
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVC 252
LMS YSKC A +F RM + +++++ +IS E +V LFKE+ G
Sbjct: 251 TGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWR 310
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
PN T + +I S R +H +K ++ V L T+Y R M+ + +
Sbjct: 311 PNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSI 370
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGAAED 370
FD + + + SWNA+ISGYAQNGL+ AV A F +++E +PN T S L+A
Sbjct: 371 FDAMLEKTMESWNAMISGYAQNGLTEMAV-ALFQLMQELNVQPNPITISSTLSACAHLGA 429
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+SL G+ H I K L+ + V +AL+DMY K GSI E++ +F+ K+ +W A+I
Sbjct: 430 LSL--GKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMI 487
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
S HG + +K+M + + P S TFLSV+ C G++ +G+ +F M +Y I
Sbjct: 488 SGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRI 547
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG---GPGLSVLQSLLGACRIHGNVEMGER 547
P +H +CMVD+LGR G+L EA EL+ + P GPG V +LLGAC +H N ++ +
Sbjct: 548 TPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPG--VWGALLGACMVHKNSDLAKL 605
Query: 548 IADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG 607
+ L +++ +G YVL+SNLY K + A++R+ K++ + K G + ++GD
Sbjct: 606 ASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRP- 664
Query: 608 LHGFSSGDNTHPRSEEIYRMAECLGSEM 635
H F +GD+ HP+SE IY E L ++M
Sbjct: 665 -HVFMAGDHLHPQSEAIYSYLERLTAKM 691
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 185/374 (49%), Gaps = 33/374 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF----------EKSDDALSFALRMNL 50
M++Y K G D A +F+ ++NPD+V++N ++SG+ E + + R N
Sbjct: 254 MSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNS 313
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
+V YS HE L LH+ +VK LD++ V AL T+Y R +
Sbjct: 314 STLVAVIPVYSP-----FGHE--LLARCLHAFVVKARLDADALVSTALTTLYCRLNDMES 366
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASAC 169
AR +FD M K SWNA++SGY Q+G E +AL ++M++ ++ + ++ +S SAC
Sbjct: 367 ARSIFDAMLEKTMESWNAMISGYAQNG--LTEMAVALFQLMQELNVQPNPITISSTLSAC 424
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
H L LGK +H + K +V V L+ Y+KC +A +F RM ++NV+SW
Sbjct: 425 AHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWN 484
Query: 230 TMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
MIS +A+ L+K+M + P TF+ +I+A S G LV EG+ + + +
Sbjct: 485 AMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRV-MTN 543
Query: 285 NFLSEPSV--CNCLITMYARFESMQDSEKVFDELSCREIIS--WNALISG---YAQNGLS 337
+ P + C C++ + R + ++ ++ E I W AL+ + + L+
Sbjct: 544 EYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLA 603
Query: 338 LAAVQAFFGVIKES 351
A Q F + E+
Sbjct: 604 KLASQKLFELDSEN 617
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 215/454 (47%), Gaps = 28/454 (6%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYS 61
+Y K + D A +F+ + +PD + WNT+L+G S+ +F ++ V D+ T +
Sbjct: 157 KLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRMVDAGRVRPDSTTLA 216
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
++L + G +H VK GL +V L+++YS+ G + A+ +FD M N
Sbjct: 217 SSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNP 276
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDH---VSFTSAASACGHEKNLEL 177
D V++NA++SGY+ +G VE+ + L E+ G R + V+ S GHE L
Sbjct: 277 DLVAYNALISGYSVNG--MVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHEL---L 331
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
+ +H +K V L + Y + A +F M ++ + SW MIS +
Sbjct: 332 ARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQ 391
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ AV+LF+ M+ V PN +T + A + + G+ +H + K V
Sbjct: 392 NGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYV 451
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
LI MYA+ S+ ++ +FD + + ++SWNA+ISGY +G A++ + ++
Sbjct: 452 MTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARI 511
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQR-----CHSHIIKVGLDSDPIVGSALLDMYGKRG 406
P + TF SV+ A + GQ+ + + I G++ + ++D+ G+ G
Sbjct: 512 LPTSSTFLSVIYACSHGGLVD--EGQKVFRVMTNEYRITPGIEH----CTCMVDLLGRAG 565
Query: 407 SIFESQRVFNETQEKS--EFAWTAIISALARHGD 438
+ E+ + +E + + W A++ A H +
Sbjct: 566 KLNEALELISEFPQSAIGPGVWGALLGACMVHKN 599
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 174/347 (50%), Gaps = 8/347 (2%)
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR 236
+ +HG+S+ GY V + L Y K DA KVF + + I W T+++ +
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192
Query: 237 EDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
+A+ F M G V P+ T + A + + + GR +HG +K V
Sbjct: 193 SEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTG 252
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
L+++Y++ M ++ +FD + +++++NALISGY+ NG+ ++V+ F + +PN
Sbjct: 253 LMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPN 312
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ T +V+ L RC H+ ++K LD+D +V +AL +Y + + ++
Sbjct: 313 SSTLVAVIPVYSPFGHELL---ARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARS 369
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F+ EK+ +W A+IS A++G E + F+ M+ V+P+ IT S L+ C G
Sbjct: 370 IFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGA 429
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ G+ + + K+ +E + + ++DM + G + EA + ++
Sbjct: 430 LSLGKWVHRIISKE-KLELNVYVMTALIDMYAKCGSIAEARSIFDRM 475
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 164/386 (42%), Gaps = 61/386 (15%)
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
GN R +HGL + + ++ V + L +Y + D+ KVFD + + I WN L
Sbjct: 127 GNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTL 186
Query: 328 ISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
++G + A++AF ++ +P++ T S L A AAE + G+ H + +K
Sbjct: 187 LAGLPGS----EALEAFVRMVDAGRVRPDSTTLASSLRA--AAEASHMAMGRCVHGYGVK 240
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
GL V + L+ +Y K G + +Q +F+ A+ A+IS + +G ES +
Sbjct: 241 CGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVEL 300
Query: 446 FKEMENKGVRPDSITFLSVLTV------------------------------------CG 469
FKE+ G RP+S T ++V+ V C
Sbjct: 301 FKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCR 360
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE---ELVGQIPGGPGL 526
N M R +FD+ML E + + ++ M+ + G E A +L+ ++ P
Sbjct: 361 LNDM-ESARSIFDAML-----EKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNP 414
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMS--NLYAEKGDWEMVAILRK 584
+ S L AC G + +G+ + + K E YV+ + ++YA+ G +
Sbjct: 415 ITISSTLSACAHLGALSLGKWVHRIISK-EKLELNVYVMTALIDMYAKCGSIAEARSIFD 473
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHG 610
M +K V SW + GLHG
Sbjct: 474 RMDNKNV-----VSWNAMISGYGLHG 494
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 208/660 (31%), Positives = 352/660 (53%), Gaps = 23/660 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
MY G+ A +F L + ++V+WN ++ GF ++ +++L L V +
Sbjct: 198 MYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSA 257
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
++++ LS C E FG+Q+H +VK G +++ YV +L+TMYS+ + +A VFD++
Sbjct: 258 SFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQV 317
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K + WNA++S Y +G + + +M + D ++ T+ S+C + + G
Sbjct: 318 SVKKTELWNAMISAYVGNGR-SYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFG 376
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MN 235
+ IH +K ++V++ + L++ YSKC + DAN +F + R+V++W +MIS N
Sbjct: 377 RLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQN 436
Query: 236 RE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
R+ +A+ + M + G P+ ++ A + V G IHGL IK+ + V
Sbjct: 437 RKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVA 496
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGVI 348
+ L+ MY++F + S VF ++ + +++WN++IS Y +NGL ++ F +G+
Sbjct: 497 SSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLF 556
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+S V + L+ G+ H ++I+ + SD + +AL+DMY K G +
Sbjct: 557 PDSV------SITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFL 610
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+Q +F + + W +I+ HGD+ M+ F EM + G+ PD ITF+S+LT C
Sbjct: 611 KYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSC 670
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G I +G LF M ++ IEP +HY +VD+LGR GRL++A V +P P S+
Sbjct: 671 NHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSI 730
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
SLL +CR+H NVE+G+ A L+ +EP+ +YV + NLY E + A LR MK
Sbjct: 731 WLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAANLRASMKE 790
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
KG++K G SW +VG + + F SGD++ PR+ EIY + L M+ E AL
Sbjct: 791 KGLKKTPGCSWIEVG--NSIDVFFSGDSSSPRTIEIYDLLNSLRRNMRKKGGHYESVEAL 848
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/556 (26%), Positives = 279/556 (50%), Gaps = 22/556 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNL-----NNPDIVSWNTVLSG---FEKSDDALSFALRMNLIG 52
+N Y K G F A+ +F+ L + D+ WN++++G F + ++ RM L G
Sbjct: 92 INFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFG 151
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
V DA + L H G+ Q+H V+ + ++ + LI MY GR ++A
Sbjct: 152 VRPDAYSLCILLGASDGHLGY--AKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAW 209
Query: 113 RVFDEMPNK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
R+F E+ +K + V+WN ++ G+ ++G + ++ + + ++L SFTS SAC
Sbjct: 210 RLFKELEDKGNVVAWNVMIGGFGENGLWE-NSLEVYLLAKNENVKLVSASFTSTLSACCQ 268
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+ + G Q+H +K+G+ V L++ YSKC++ DA VF ++ + W M
Sbjct: 269 GEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAM 328
Query: 232 ISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS D + ++K+M++ + P+ +T ++ + + GR+IH +K
Sbjct: 329 ISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPI 388
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S ++ + L+TMY++ + D+ +F+ + R++++W ++ISG+ QN + A++ +
Sbjct: 389 QSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNS 448
Query: 347 V-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ + KP++ SV++A ++++L G H IK GL+ D V S+L+DMY K
Sbjct: 449 MTVYGEKPDSDIMASVVSACTGLKNVNL--GCTIHGLAIKSGLEQDVFVASSLVDMYSKF 506
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
S VF++ K+ AW +IIS R+G + ++ F +M G+ PDS++ SVL
Sbjct: 507 NFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVL 566
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
++ KG+ + +++ I + ++DM + G L+ A+ + +
Sbjct: 567 VSVSSVAVLRKGKAVHGYLIRQ-RIPSDLQLENALIDMYIKCGFLKYAQHIFQNML-QTN 624
Query: 526 LSVLQSLLGACRIHGN 541
L ++ C HG+
Sbjct: 625 LVTWNIMIAGCGSHGD 640
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 200/402 (49%), Gaps = 22/402 (5%)
Query: 134 TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG-YGT 192
Q G Y + AL R L ++ S ACG NL+ GK IH I G + +
Sbjct: 28 VQQGQY----VDALQFYSRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYS 83
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHD-----RNVISWTTMIS-----MNREDAVSL 242
+ L++ Y KC G+A KVF ++ + ++V W ++++ ++++ ++
Sbjct: 84 DPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQ 143
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
F M+L GV P+ + L+ A S G+L + IHG ++ F +P + + LI MY
Sbjct: 144 FCRMQLFGVRPDAYSLCILLGA-SDGHL-GYAKQIHGYSVRKVFYGDPFLESGLIYMYFS 201
Query: 303 FESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
D+ ++F EL + +++WN +I G+ +NGL +++ + E+ K + +F S
Sbjct: 202 CGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTS 261
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
L+A E +S G + H ++K+G ++DP V ++LL MY K + +++ VF++
Sbjct: 262 TLSACCQGEFVSF--GMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSV 319
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
K W A+ISA +G + +K+M+ + PDS+T +VL+ C G GR +
Sbjct: 320 KKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLI 379
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
++K I+ + S ++ M + G ++A + I G
Sbjct: 380 HAELVKR-PIQSNVALQSALLTMYSKCGNSDDANSIFNTIKG 420
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 152/288 (52%), Gaps = 9/288 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+ MY K G D A IFN + D+V+W +++SGF K +AL F M + G D+
Sbjct: 399 LTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDS 458
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ +S C + G +H L +K GL+ +V+V ++L+ MYS++ + VF +
Sbjct: 459 DIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSD 518
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP K+ V+WN+I+S Y ++G + +I +M + GL D VS TS + L
Sbjct: 519 MPLKNLVAWNSIISCYCRNGLPDL-SISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRK 577
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK +HG I+ + + + N L+ Y KC A +F+ M N+++W MI+
Sbjct: 578 GKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGS 637
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+ A+SLF EMR G+ P+D+TFI L+ + + ++EG + L
Sbjct: 638 HGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQL 685
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 201/650 (30%), Positives = 345/650 (53%), Gaps = 21/650 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVF- 55
+ Y + A +F + P D+ WN +LS + + +AL ++N V
Sbjct: 45 IGFYFSCHDYASAELVFQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRP 104
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D TY L C ++G ++H+ ++K GL +V+VG++L+ MY++ + V+A ++F
Sbjct: 105 DFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLF 164
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKN 174
DE P +D WNA++S Y +DG E L + M++ G + V+FT S+C N
Sbjct: 165 DEFPQRDVGCWNAVISCYFKDGK--AEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLN 222
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
LE GK++H I+ V + L+ Y KC A +VF ++ +N I+W MI+
Sbjct: 223 LERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITG 282
Query: 235 -----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + L M +G P +T +I+A S ++ G+ IHG ++ +
Sbjct: 283 YSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVD 342
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ LI Y + + +E +F +S E++SWN +ISG+ G + A+ + +K
Sbjct: 343 IFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALH-IYDNMK 401
Query: 350 ES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
E KP+A TF S L+A ++ +L G+ H II L+++ IV ALLDMY K G
Sbjct: 402 EHHVKPDALTFSSTLSA--CSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGD 459
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ E++++F++ ++ +WT++I A HG + F EM+ VR DS+TFL+VL+
Sbjct: 460 VDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSA 519
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP-GGPGL 526
C G++ +G F+ M+ Y I+P +HYSC++D+LGR GRL EA E++ + +
Sbjct: 520 CSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDI 579
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
+L +L AC +H N +G +I L++++P +Y+L+SN+YA W+ V +R+ M
Sbjct: 580 GLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKM 639
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
K G++K G SW ++ +H F + D ++P ++ +Y LG M+
Sbjct: 640 KELGLKKSPGCSWIEIN--QRIHPFFAEDKSNPLADGVYECLNILGCHME 687
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 136/269 (50%), Gaps = 6/269 (2%)
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
VT + + + L+K+G++IH F S + LI Y +E VF
Sbjct: 4 VTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQT 63
Query: 316 LSCREIIS-WNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDIS 372
C +S WNAL+S Y N + A+Q F + S +P+ YT+ VL A G +
Sbjct: 64 NDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVI 123
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
+G+R H+H++K GL D VGS+L++MY K ++ ++F+E ++ W A+IS
Sbjct: 124 --YGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
+ G E + F +M+ G P+S+TF V++ C R + +G+ + ++ + I
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELI-ERRILL 240
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
S +VDM G+ G LE A+E+ +IP
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEKIP 269
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 211/574 (36%), Positives = 318/574 (55%), Gaps = 20/574 (3%)
Query: 75 FGLQLHS-LIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGY 133
G LH+ L++ + ++ N LITMYS + A R+FD MP + VSW ++SG
Sbjct: 35 LGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGL 94
Query: 134 TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
TQ+ + +A+ A M R GL + +SAA A G Q+H V +++G+
Sbjct: 95 TQNSMHR-DALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAE 153
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRL 248
+ V + L YSK + +A +VF +M ++ ++WT MI + N E AV F++MR
Sbjct: 154 LFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRR 213
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEG---RMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
+G+ D + + + S G +K+G R IH +K+ F E +V N L MYA+
Sbjct: 214 EGLVGADQHVLCSVLSASGG--LKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAAD 271
Query: 306 MQDSEKVFD-ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLN 363
M ++ +V + ++S +LI GY + A+ F + ++ +PN +TF S++
Sbjct: 272 MDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIK 331
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
G A L+ G + H+ +IK L SD V S LLDMYGK G I S ++F E + ++
Sbjct: 332 --GCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTD 389
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
AW A I+ LA+HG + F M + G+RP+ ITF+S+LT C G++ +G F S
Sbjct: 390 IAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYS 449
Query: 484 MLKDYH-IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
M KD+H IEP +HYSC++DM GR GRL+EAE+ +G++P P SLLGACR+ GN
Sbjct: 450 M-KDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNK 508
Query: 543 EMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADV 602
E+GE AD +MK+EP +G +V +S +YA G WE V +RK M+ ++K GFSW D
Sbjct: 509 ELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDS 568
Query: 603 GDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
H F S D +HP+ E+IY E L +K
Sbjct: 569 N--KKTHVFGSEDWSHPQQEKIYEKLEELYERIK 600
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 243/473 (51%), Gaps = 23/473 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY A+ +F+ + P++VSW T++SG ++ DAL+ M G+V
Sbjct: 60 ITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQ 119
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+A G QLH + V+ G D+E++V + L MYS+ G LVEA RVFD+
Sbjct: 120 FALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQ 179
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNLE 176
MP KD+V+W A++ GY ++G+ A++A +M R+GL D S SA G K+
Sbjct: 180 MPQKDAVAWTAMIDGYAKNGNLEA-AVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGW 238
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR-RMHDRNVISWTTMI--- 232
L + IH +K G+ V+V N L Y+K +A +V + NV+S T++I
Sbjct: 239 LARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGY 298
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ E A+ +F E+R GV PN+ TF +I ++ L+++G +H IKT+ +S+
Sbjct: 299 IETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDS 358
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + L+ MY + + S ++F E+ I+WNA I+ AQ+G A++AF +
Sbjct: 359 FVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSS 418
Query: 351 S-KPNAYTFGSVLNAVGAA--EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+PN TF S+L A A D LK+ H G++ S ++DMYG+ G
Sbjct: 419 GIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDH---HGIEPKGEHYSCIIDMYGRAGR 475
Query: 408 IFESQRVFNETQEK-SEFAWTAIISALARHGDYE----SVMNQFK-EMENKGV 454
+ E+++ E K + + W +++ A G+ E + N K E +N GV
Sbjct: 476 LDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGV 528
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 200/656 (30%), Positives = 352/656 (53%), Gaps = 23/656 (3%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYS 61
CK G A +F+ ++ +IV++N+++SG+ + D + + +G+ D +
Sbjct: 12 CKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCA 71
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
AL+ C G +H LI+ +GL S+V + N+LI MYS+ G++ AR +FD
Sbjct: 72 GALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL 131
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKN--LELG 178
D VSWN++++GY Q+G Y E +L +++ M + GL + + SA AC N G
Sbjct: 132 DGVSWNSLIAGYVQNGKY--EELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFG 189
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNR 236
+H +IK+G V VG L+ Y+K DA ++F +M D+NV+ + M++ + +
Sbjct: 190 TMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQ 249
Query: 237 E--------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
E A++LF EM+ G+ P+ T+ L+ A I K + +H L K LS
Sbjct: 250 ETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLS 309
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ + + LI +Y+ SM D+ F+ + I+ A+I GY QNG +A+ F+ ++
Sbjct: 310 DEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELL 369
Query: 349 K-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
E KP+ + F +++++ A L+ G++ H KVG+ I ++ + MY K G
Sbjct: 370 TYEEKPDEFIFSTIMSS--CANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGD 427
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
++ + F + + +W+ +I + A+HG + F+ M++ G+ P+ FL VL
Sbjct: 428 LYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIA 487
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ +G FD+M KDY ++ H C+VD+LGR GRL +AE L+ ++
Sbjct: 488 CSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPV 547
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+ ++LL ACRIH + +R+A ++++EP S SYVL+ N+Y + G+ + +R M+
Sbjct: 548 MWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLME 607
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
+ ++KE G SW +G D ++ F SGD +H S +IY + + + K L+S ++
Sbjct: 608 ERRIKKEPGLSWIQIG--DKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKD 661
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 142/567 (25%), Positives = 259/567 (45%), Gaps = 60/567 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K GQ D A +F++ + D VSWN++++G+ K ++ L+ +M+ G+ F+
Sbjct: 109 IDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNT 168
Query: 58 VTYSTALSFCLDHEG--FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T +AL C + +FG LH +K GL +V VG AL+ MY++ G L +A ++F
Sbjct: 169 YTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIF 228
Query: 116 DEMPNKDSVSWNAILSGYTQ----DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
D+M +K+ V +NA+++G Q + +A+ EM G++ +++S AC
Sbjct: 229 DQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACII 288
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
++ + KQ+H + K G + +G++L+ YS DA F +H+ ++ T M
Sbjct: 289 VEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAM 348
Query: 232 I-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I + E A+SLF E+ P++ F ++ + + +++ G I G K
Sbjct: 349 IFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGI 408
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
N I MYA+ + + F ++ +I+SW+ +I AQ+G ++ A++ FF
Sbjct: 409 SRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALR-FFE 467
Query: 347 VIKES--KPNAYTFGSVLNAV---GAAE-----------DISLK-HGQRC---------- 379
++K +PN + F VL A G E D +K H + C
Sbjct: 468 LMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRA 527
Query: 380 ------HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
S I+++G + +P++ ALL +QRV + E A
Sbjct: 528 GRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLA-------- 579
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM--IHKGRHLFDSMLKDYHIE 491
Y + N + + NK T + + G+ I G ++ + D +
Sbjct: 580 --SASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHK 637
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVG 518
S Y+ + +ML RL+ A++++G
Sbjct: 638 NSGQIYAKLDEMLATTKRLDSAKDILG 664
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 144/282 (51%), Gaps = 19/282 (6%)
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDV 256
S KC T A+K+F +M N++++ ++IS N + + LF + R G+ +
Sbjct: 9 SRQCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKY 68
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
G + A S + G+MIHGL + S+ + N LI MY++ + + +FD
Sbjct: 69 NCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHS 128
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-----NAYTFGSVLNAVGAAEDI 371
+ +SWN+LI+GY QNG + ++++ N YT GS L A + +
Sbjct: 129 DKLDGVSWNSLIAGYVQNG----KYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNG 184
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
G H H IK+GL D +VG+ALLDMY K GS+ ++ ++F++ +K+ + A+++
Sbjct: 185 CKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMA 244
Query: 432 ALARHGDYE-----SVMNQFKEMENKGVRPDSITFLSVLTVC 468
L + E +N F EM++ G++P T+ S+L C
Sbjct: 245 GLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKAC 286
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 312/575 (54%), Gaps = 54/575 (9%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
F LH+L+V G +++ L+ +Y+ G + +R FD++P KD +WN+++S Y
Sbjct: 34 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 93
Query: 135 QDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
+G + EAI +++ +R D +F ACG L G++IH + K+G+ +
Sbjct: 94 HNGHFH-EAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWN 149
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRL 248
V V L+ YS+ TG A +F M R++ SW MIS N A+ + EMRL
Sbjct: 150 VFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 209
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
+G IK NF++ S+ + MYA+ +
Sbjct: 210 EG-------------------------------IKMNFVTVVSILPVFVDMYAKLGLLDS 238
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVIKESKPNAYTFGSVLNA-- 364
+ KVF+ + +++ISWN LI+GYAQNGL+ A++ + KE PN T+ S+L A
Sbjct: 239 AHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYA 298
Query: 365 -VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
VGA L+ G + H +IK L D V + L+D+YGK G + ++ +F + ++S
Sbjct: 299 HVGA-----LQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS 353
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
W AIIS HG E + F EM ++GV+PD +TF+S+L+ C +G + +G+ F
Sbjct: 354 VTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF-R 412
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
++++Y I+PS HY CMVD+LGR G LE A + + +P P S+ +LLGACRIHGN+E
Sbjct: 413 LMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 472
Query: 544 MGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG 603
+G+ +D L +++ G YVL+SN+YA G WE V +R + +G++K G+S +V
Sbjct: 473 LGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVN 532
Query: 604 DIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+ F +G+ +HP+ +EIY L ++MK L
Sbjct: 533 --RKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSL 565
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 218/453 (48%), Gaps = 51/453 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIG-VVFD 56
+N+Y G + C F+ + D+ +WN+++S + + +A+ ++ L+ + D
Sbjct: 58 VNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPD 117
Query: 57 AVTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T+ L C G L G ++H K G V+V +LI MYSR+G AR +F
Sbjct: 118 FYTFPPVLKAC----GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 173
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D+MP +D SWNA++SG Q+G+ +A+ L EM +G
Sbjct: 174 DDMPFRDMGSWNAMISGLIQNGN-AAQALDVLDEMRLEG--------------------- 211
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
IKM + T VS+ V + Y+K + A+KVF + ++VISW T+I+
Sbjct: 212 ----------IKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGY 261
Query: 236 RE-----DAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ +A+ ++K M + PN T++ ++ A + +++G IHG IKTN +
Sbjct: 262 AQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLD 321
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V CLI +Y + + D+ +F ++ ++WNA+IS + +G + ++ F ++
Sbjct: 322 VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLD 381
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E KP+ TF S+L+A + + + G+ C + + G+ ++D+ G+ G +
Sbjct: 382 EGVKPDHVTFVSLLSACSHSGFV--EEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYL 439
Query: 409 FESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ + + + + W A++ A HG+ E
Sbjct: 440 EMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 472
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 321/584 (54%), Gaps = 16/584 (2%)
Query: 75 FGLQLHSLIVKFGLDSEV--YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G H+ I+K LD+ + ++ N L+ MYS+ R A+ + PN+ V+W A+++G
Sbjct: 24 LGRAAHAQIIK-TLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAG 82
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Q+G + A+ M R ++ + +F A A G ++ +GKQ+H +++K G +
Sbjct: 83 SVQNGRF-TSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQIS 141
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEMR 247
V VG YSK +T +A K+F M +RN+ +W +S + +DA++ F E R
Sbjct: 142 DVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFR 201
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
+G PN +TF ++A + + ++ GR +HG +++ F ++ SV N LI Y + +
Sbjct: 202 HEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVG 261
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVG 366
SE +F +S +SW ++I Y QN A F KE +P + SVL+A
Sbjct: 262 CSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACA 321
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
L+ G+ H+ +K + + VGSAL+DMYGK GSI +++R F+E E++ W
Sbjct: 322 GLS--VLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTW 379
Query: 427 TAIISALARHGDYESVMNQFKEME--NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
A+I A G + + F EM + V P+ +TF+ VL+ C R G ++ G +F+SM
Sbjct: 380 NAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESM 439
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
Y IEP +HY+C+VD+LGR G +E+A + + ++P P +SV +LLGA ++ G E+
Sbjct: 440 RGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSEL 499
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
G+ AD L +++P SG++VL+SN++A G WE ++RK MK G++K G SW G
Sbjct: 500 GKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAG- 558
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+ +H F + D +H R+ EI M L EM+ + + AL
Sbjct: 559 -NAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFAL 601
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 145/525 (27%), Positives = 245/525 (46%), Gaps = 51/525 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY K + + A + + N +V+W +++G ++ AL M + +
Sbjct: 49 VNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPND 108
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ A L G Q+H+L VK G S+V+VG + MYS+ G EAR++FDE
Sbjct: 109 FTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDE 168
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ +WNA LS +G Y +A+ A IE +G + ++F + +AC L L
Sbjct: 169 MPERNIATWNAYLSNSVLEGRYD-DALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRL 227
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+Q+HG ++ G+ VSV N L+ Y KC G + +F + N +SW +MI
Sbjct: 228 GRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQ 287
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E A +F R +G+ P D ++ A + ++++ G+ +H L +K + V
Sbjct: 288 NDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFV 347
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ L+ MY + S++D+E+ FDE+ R +++WNA+I GYA G + AV F + S
Sbjct: 348 GSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSH 407
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
PN TF VL+A A ++ VG++ IF
Sbjct: 408 RVAPNYVTFVCVLSACSRAGSVN-------------VGME------------------IF 436
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
ES R + +E + ++ L R G E K+M +RP + ++L
Sbjct: 437 ESMRGRYGIEPGAEH-YACVVDLLGRAGMVEQAYQFIKKMP---IRPTVSVWGALLGASK 492
Query: 470 RNGMIHKGRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVGRLEEA 513
G G+ D++ + ++P ++ + +M GR EEA
Sbjct: 493 MFGKSELGKVAADNL---FELDPLDSGNHVLLSNMFAAAGRWEEA 534
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 330/600 (55%), Gaps = 22/600 (3%)
Query: 28 WNTVLSGFEKSD--DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVK 85
WNT++ G+ + L +M IGV D T+ L C D G ++H +VK
Sbjct: 10 WNTLIRGYSIAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVVK 69
Query: 86 FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
G +S+V+VGN L++ Y G L +A RVFDEMP KD VSWN ++ ++ +G + +A+
Sbjct: 70 LGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALD 129
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
M+ +GL+ + ++ +S + + G+++HG SI+MG + + + N L+ Y+
Sbjct: 130 MFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYA 189
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEMRLDGVCPNDVTFIG 260
K + +A+ VF ++ +NV+SW MI+ NR + AV L ++M+ G PN VTF
Sbjct: 190 KSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTN 249
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
++ A + LV+ G+ IH I + V N L MYA+ ++ + VFD S R+
Sbjct: 250 VLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT-SLRD 308
Query: 321 IISWNALISGYAQNG-----LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKH 375
+S+N LI G++Q LSL + G+ K + +F L+A A ++K
Sbjct: 309 EVSYNILIVGHSQTSDCSESLSLFSEMQLMGL----KQDNVSFMGALSA--CANLTAIKQ 362
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G+ H +++ V ++LLD Y K G I ++ +F+ K +W +I
Sbjct: 363 GKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGM 422
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
G+ ++ ++ F+ M V DS++F++VL+ C G++ KGR FD LK IEP+
Sbjct: 423 LGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDE-LKARGIEPTQM 481
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM 555
HY+CMVD+LGR G +EEA EL+ +P P ++ +LLGACRI+GN+E+ A+ L ++
Sbjct: 482 HYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFEL 541
Query: 556 EPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGD 615
+P SG Y L+SN+YAE G W+ +R+ MKS+GV+K G SW +G + H F G+
Sbjct: 542 KPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWVQIG--EQAHAFVVGE 599
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 230/451 (50%), Gaps = 15/451 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVFD 56
++ Y G A +F+ + D+VSWNT++ F + DAL M G+ +
Sbjct: 83 LSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPN 142
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++T S+ L ++ E F G ++H ++ GL+S++++ N+LI MY++ G EA VF
Sbjct: 143 SITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFY 202
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
++ K+ VSWNA+++ + Q+ + + A+ + +M G + V+FT+ AC +
Sbjct: 203 KLDAKNVVSWNAMIANFAQN-RFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVR 261
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
GK+IH SI MG + V N L Y+K A VF R+ +S+ +I
Sbjct: 262 PGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVF-DTSLRDEVSYNILIVGHS 320
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + +++SLF EM+L G+ ++V+F+G + A + +K+G+ IHG ++ F
Sbjct: 321 QTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLF 380
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L+ Y + + + +FD ++ +++ SWN +I GY G A+ F + K+
Sbjct: 381 VANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDD 440
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ ++ +F +VL+A + L+ G++ + G++ + + ++D+ G+ G + E
Sbjct: 441 VEYDSVSFIAVLSA--CSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEE 498
Query: 411 SQRVFNETQEKSEF-AWTAIISALARHGDYE 440
+ + + W A++ A +G+ E
Sbjct: 499 AAELIKGLPIVPDANIWGALLGACRIYGNLE 529
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 202/635 (31%), Positives = 348/635 (54%), Gaps = 44/635 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ +Y +SG A IF+ ++ D VS+N+++SG + + AL+ +MNL D
Sbjct: 293 VTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDC 352
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT ++ LS C G Q HS +K G+ S++ V +L+ +Y + + A F
Sbjct: 353 VTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLC 412
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
D++ N +TQ M +G+ + ++ S C +L
Sbjct: 413 YGQLDNL--NKSFQIFTQ--------------MQIEGIVPNQFTYPSILKTCTTLGATDL 456
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+QIH +K G+ +V V +VL+ Y+K A K+FRR+ + +V+SWT MI+ +
Sbjct: 457 GEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQ 516
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A++LFKEM+ G+ +++ F I A + + +GR IH + + + S+
Sbjct: 517 HDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSI 576
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+++YAR ++++ FD++ ++ +SWN+L+SG+AQ+G A+ F + K
Sbjct: 577 GNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGL 636
Query: 352 KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ N++TFGS AV AA +I+ ++ G++ H I K G DS+ V +AL+ +Y K G+I
Sbjct: 637 EINSFTFGS---AVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI-- 691
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ +W ++I+ ++HG + F++M+ V P+ +TF+ VL+ C
Sbjct: 692 -----------DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSH 740
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G F SM + +++ P P+HY+C+VD+LGR G L A+ V ++P P V +
Sbjct: 741 VGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWR 800
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL AC +H N+++GE A L+++EP S +YVL+SN+YA G W+ R+ MK +G
Sbjct: 801 TLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRG 860
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
V+KE G SW +V + +H F +GD HPR++ IY
Sbjct: 861 VKKEPGRSWVEVD--NSVHAFFAGDQNHPRADMIY 893
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 250/516 (48%), Gaps = 32/516 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K+G A +F NL D VSW ++SG ++ ++A+ ++
Sbjct: 206 IDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------- 256
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
LS C E F FG QLH L++K G SE YV NAL+T+YSR G L A ++F
Sbjct: 257 -----VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHC 311
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VS+N+++SG Q G Y A+ +M + D V+ S SAC L
Sbjct: 312 MSQRDRVSYNSLISGLAQQG-YINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPN 370
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GKQ H +IK G + + V L+ Y KC A++ F + + + ++N+
Sbjct: 371 GKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF--------LCYGQLDNLNK- 421
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
+ +F +M+++G+ PN T+ ++ + G IH +KT F V + LI
Sbjct: 422 -SFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLI 480
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
MYA+ + + K+F L +++SW A+I+GY Q+ A+ F + + K +
Sbjct: 481 DMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNI 540
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
F S ++A + +L G++ H+ G D +G+AL+ +Y + G + E+ F+
Sbjct: 541 GFASAISACAGIQ--ALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFD 598
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
+ K +W +++S A+ G +E +N F +M G+ +S TF S ++ +
Sbjct: 599 QIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRI 658
Query: 477 GRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
G+ + M++ + + + ++ + + G +++
Sbjct: 659 GKQI-HGMIRKTGYDSETEVSNALITLYAKCGTIDD 693
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 256/539 (47%), Gaps = 47/539 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++ Y G + A+ +F+ + + WN + + F RM V FD
Sbjct: 104 IDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDE 163
Query: 58 VTYSTALSFCLDHE-GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ L C + F F Q+H+ + G +S ++ N LI +Y + G L A++VF+
Sbjct: 164 RIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFE 223
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +DSVSW A++SG +Q+G Y EA+L +++ SAC + E
Sbjct: 224 NLKARDSVSWVAMISGLSQNG-YEEEAMLLFCQIV--------------LSACTKVEFFE 268
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GKQ+HG+ +K G+ + V N L++ YS+ A ++F M R+ +S+ ++IS
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLA 328
Query: 234 ----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+NR A++LFK+M LD P+ VT L+ A + + G+ H IK S+
Sbjct: 329 QQGYINR--ALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSD 386
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V L+ +Y + ++ + + F L ++ + N + Q + G++
Sbjct: 387 IVVEGSLLDLYVKCSDIKTAHEFF--LCYGQLDNLNKSFQIFTQMQIE--------GIV- 435
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
PN +T+ S+L L G++ H+ ++K G + V S L+DMY K G +
Sbjct: 436 ---PNQFTYPSILKTCTTLGATDL--GEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLD 490
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ ++F +E +WTA+I+ +H + +N FKEM+++G++ D+I F S ++ C
Sbjct: 491 HALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACA 550
Query: 470 RNGMIHKGRHLF-DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
+ +GR + S L Y + S + +V + R G++ EA QI +S
Sbjct: 551 GIQALDQGRQIHAQSCLSGYSDDLSIGN--ALVSLYARCGKVREAYAAFDQIYAKDNVS 607
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 201/438 (45%), Gaps = 46/438 (10%)
Query: 93 YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR 152
Y G LI Y +G L A VFDEMP + WN I + + + G L M+
Sbjct: 98 YDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGL-FRRMLT 156
Query: 153 KGLRLDHVSFTSAASAC-GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
K + D F C G+ + +QIH +I G+ + + N L+ Y K
Sbjct: 157 KNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLS 216
Query: 212 DANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
A KVF + R+ +SW MIS E+A+ LF ++ L V F
Sbjct: 217 SAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSAC--TKVEFFEF----- 269
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNA 326
G+ +HGL +K F SE VCN L+T+Y+R ++ +E++F +S R+ +S+N+
Sbjct: 270 -------GKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNS 322
Query: 327 LISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
LISG AQ G A+ F + + KP+ T S+L+A + +L +G++ HS+ IK
Sbjct: 323 LISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVG--ALPNGKQFHSYAIK 380
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
G+ SD +V +LLD+Y K I + F + +
Sbjct: 381 AGMTSDIVVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQI 425
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK---DYHIEPSPDHYSCMVD 502
F +M+ +G+ P+ T+ S+L C G G + +LK +++ S S ++D
Sbjct: 426 FTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS----SVLID 481
Query: 503 MLGRVGRLEEAEELVGQI 520
M + G+L+ A ++ ++
Sbjct: 482 MYAKHGKLDHALKIFRRL 499
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 209/578 (36%), Positives = 320/578 (55%), Gaps = 20/578 (3%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYS--RWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
Q+H+ +++ GL + + + ++ S G L AR VF ++PN S + N+I+ G T
Sbjct: 6 QIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT- 64
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
D + EA+L EMM +GL D +F S +C +N GKQIH S K+G+ +
Sbjct: 65 DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCHSTKLGFASDTY 121
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLF-KEMRLD 249
N LM+ YS C A KVF +M D+ V+SW TMI ++ + +AV LF + M+ +
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSE 181
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
V PN+VT + ++ A + + + IH + F + L+ +Y + +Q +
Sbjct: 182 NVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLA 241
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAA 368
+FD+ + + SWN +I+G+ ++ A+ F + K K + T S+L A
Sbjct: 242 RDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHL 301
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+ L G+ H++I K +D D +G+AL+DMY K GSI + +VF+E EK WTA
Sbjct: 302 GALEL--GKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTA 359
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+I LA G E+ + F EM KGV+PD+ITF+ VL C G + +G F+SM Y
Sbjct: 360 LILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTY 419
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
I+P+ +HY +VD+LGR GR+ EAEEL+ +P P VL LLGACRIHGN+E ER
Sbjct: 420 GIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERA 479
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL 608
A L++++P SG+YVL+SN+Y WE R+ M +G+RK G S +V + +
Sbjct: 480 AKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGV--V 537
Query: 609 HGFSSGDNTHPRSEEIYRMAECLGSEMK---YLNSKRE 643
H F GD++H +S EI M E + S++K Y+ K E
Sbjct: 538 HEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSE 575
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 226/461 (49%), Gaps = 28/461 (6%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYST 62
+SG A +F+ + NP + N+++ G + +AL F M + G++ D T+ +
Sbjct: 34 ESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPS 93
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
C + G Q+H K G S+ Y N L+ MYS G LV AR+VFD+M +K
Sbjct: 94 LFKSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKT 150
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQI 181
VSW ++ + Q D EA+ MM+ + ++ + V+ + +AC ++L + K+I
Sbjct: 151 VVSWATMIGVHAQ-WDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRI 209
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNR 236
H + G+G HV + VLM Y KC A +F + ++N+ SW MI+ N
Sbjct: 210 HEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNY 269
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
E+A+ LF+EM+ G+ + VT L+ A + ++ G+ +H K + ++ L
Sbjct: 270 EEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTAL 329
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNA 355
+ MYA+ S++ + +VF E+ +++++W ALI G A G + A+Q F + IK KP+A
Sbjct: 330 VDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDA 389
Query: 356 YTFGSVLNAVGAA----EDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIF 409
TF VL A A E IS H + + P + L+D+ G+ G I
Sbjct: 390 ITFVGVLAACSHAGFVDEGIS-------HFNSMSDTYGIQPTIEHYGGLVDILGRAGRIA 442
Query: 410 ESQRVFNE-TQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
E++ + +F ++ A HG+ E+ K++
Sbjct: 443 EAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQL 483
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 144/283 (50%), Gaps = 10/283 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVL---SGFEKSDDALS-FALRMNLIGVVFD 56
MNMY G A +F+ + + +VSW T++ + +++ ++A+ F M V +
Sbjct: 127 MNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPN 186
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT L+ C ++H I + G V + L+ +Y + G + AR +FD
Sbjct: 187 EVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFD 246
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ K+ SWN +++G+ +D +Y EA+L EM KG++ D V+ S AC H LE
Sbjct: 247 KAQEKNLFSWNIMINGHVEDSNYE-EALLLFREMQTKGIKGDKVTMASLLLACTHLGALE 305
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
LGK +H K V++G L+ Y+KC A +VF M +++V++WT +I
Sbjct: 306 LGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLA 365
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
E+A+ F EM + GV P+ +TF+G++ A S V EG
Sbjct: 366 MCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEG 408
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 197/599 (32%), Positives = 325/599 (54%), Gaps = 46/599 (7%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLH+ ++ F + E Y+ + L+ +YS+ L AR VFD++P+K++ S+NA+L Y+
Sbjct: 45 QLHARLILFSVTPENYLASKLVALYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLHN 104
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGH--EKNLELGKQIHGVSIKMGYGTHVS 195
+G L L + ++++S T + +++LGK++HG ++ G+ V
Sbjct: 105 RHG--DALDLFSSLASSNLVNNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFDADVF 162
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEM-RLD 249
V N L++ YSKC + KVF RM R+V+SW +MIS ED +L++EM
Sbjct: 163 VENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDCKTLYREMVDFS 222
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
G PN VT + ++ A + G +H + + SVCN LI +YA+ S+ +
Sbjct: 223 GFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYA 282
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG----------------------- 346
++FDE+S ++ +++ A+ISG +G +++ F G
Sbjct: 283 RELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHE 342
Query: 347 ----VIKES-----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
+++E +PNA T SVL+ + SLK G+ HS+ IK+G + V +A
Sbjct: 343 GVLDLVREMQALGFRPNAVTLSSVLSTIAYFS--SLKGGKEIHSYAIKIGYHRNIYVATA 400
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
++DMY K G + +QRVF++++++S WTAIISA A HGD + F EM +G++PD
Sbjct: 401 IIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPD 460
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
+TF +VL C GM+ K +F+SM K Y I+P +HY+C+V LG+ RL EA+E V
Sbjct: 461 PVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRLSEAKEFV 520
Query: 518 GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
++P P V +LL I +VE+G+ + D L ++EP +G+YV+M+NLY++ G W+
Sbjct: 521 SKMPIEPSAKVWGALLHGASISSDVELGKSVCDYLFEIEPENTGNYVIMANLYSQAGRWK 580
Query: 578 MVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+R+ M G++K G SW + +GL F + D EEI+ + + L M+
Sbjct: 581 EADEVRERMNKVGLQKIPGSSWIETS--EGLRSFIATDTCTENVEEIHVILKGLLGLMR 637
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 146/597 (24%), Positives = 260/597 (43%), Gaps = 97/597 (16%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRM---NLIGVVFD 56
+Y K+ A +F+ + + + S+N +L + + DAL + NL+ +
Sbjct: 68 LYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLHNRHGDALDLFSSLASSNLVNNISI 127
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ SF L G ++H +++ G D++V+V NALIT YS+ L +R+VFD
Sbjct: 128 TCLLKSLSSFTL--SDVKLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFD 185
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +D VSWN+++SGY+Q G Y L + G R + V+ S ACG ++L
Sbjct: 186 RMTKRDVVSWNSMISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLA 245
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW-------- 228
G ++H + +SV N L+ Y+KC A ++F M +++ +++
Sbjct: 246 FGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLM 305
Query: 229 ---------------------------TTMISMNREDAV-SLFKEMRLDGVCPNDVTFIG 260
T ++ NR + V L +EM+ G PN VT
Sbjct: 306 LHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSS 365
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
++ I+ + +K G+ IH IK + V +I MYA+ ++ +++VFD+ R
Sbjct: 366 VLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRS 425
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRC 379
++ W A+IS YA +G + A+ F ++K+ +P+ TF +VL A
Sbjct: 426 LVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPDPVTFTAVLAAC-------------- 471
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
A M K IFES Q E + ++ AL +
Sbjct: 472 -----------------AHCGMVDKAWEIFESMFKKYGIQPLVEH-YACVVGALGK---- 509
Query: 440 ESVMNQFKEMENK-GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP-SPDHY 497
+++ KE +K + P + + ++L + + G+ + D + + IEP + +Y
Sbjct: 510 ARRLSEAKEFVSKMPIEPSAKVWGALLHGASISSDVELGKSVCDYL---FEIEPENTGNY 566
Query: 498 SCMVDMLGRVGRLEEAEEL--------VGQIPGGPGLSV---LQSLLGACRIHGNVE 543
M ++ + GR +EA+E+ + +IPG + L+S + NVE
Sbjct: 567 VIMANLYSQAGRWKEADEVRERMNKVGLQKIPGSSWIETSEGLRSFIATDTCTENVE 623
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 206/448 (45%), Gaps = 58/448 (12%)
Query: 159 HVSFTSAASA-CG-------HEKNLEL---GKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
H TSAA CG H L L KQ+H I + + L++ YSK
Sbjct: 13 HRLLTSAAGLDCGIYGHLLHHLTELRLPLQAKQLHARLILFSVTPENYLASKLVALYSKT 72
Query: 208 EVTGDANKVFRRMHDRNVISWTTMIS----MNRE-DAVSLFKEMRLDGVCPNDVTFIGLI 262
A VF ++ +N S+ M+ NR DA+ LF + + N+++ L+
Sbjct: 73 NHLAFARYVFDQIPHKNTFSYNAMLISYSLHNRHGDALDLFSSLASSNLV-NNISITCLL 131
Query: 263 HAISIGNL--VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
++S L VK G+ +HG ++T F ++ V N LIT Y++ + S KVFD ++ R+
Sbjct: 132 KSLSSFTLSDVKLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFDRMTKRD 191
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQR 378
++SWN++ISGY+Q GL + ++ S +PN T SVL A G +D++ G
Sbjct: 192 VVSWNSMISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAF--GME 249
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG- 437
H I+ ++ D V +AL+ +Y K GS+ ++ +F+E EK E + AIIS L HG
Sbjct: 250 VHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGY 309
Query: 438 ------------------------------DYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+E V++ +EM+ G RP+++T SVL+
Sbjct: 310 VDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSSVLST 369
Query: 468 CGRNGMIHKGRHLFDSMLK-DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
+ G+ + +K YH + ++DM + G L A+ + Q L
Sbjct: 370 IAYFSSLKGGKEIHSYAIKIGYHRNIYVA--TAIIDMYAKSGYLRGAQRVFDQ-SKDRSL 426
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMK 554
+ +++ A +HG+ + + ++K
Sbjct: 427 VIWTAIISAYAVHGDANLALGLFHEMLK 454
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-LSFALRMNLI--GVVFDA 57
++MY KSG A +F+ + +V W ++S + DA L+ L ++ G+ D
Sbjct: 402 IDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPDP 461
Query: 58 VTYSTALSFC-----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
VT++ L+ C +D +F S+ K+G+ V ++ + RL EA+
Sbjct: 462 VTFTAVLAACAHCGMVDKAWEIF----ESMFKKYGIQPLVEHYACVVGALGKARRLSEAK 517
Query: 113 RVFDEMPNKDSVS-WNAILSGYTQDGD 138
+MP + S W A+L G + D
Sbjct: 518 EFVSKMPIEPSAKVWGALLHGASISSD 544
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 204/553 (36%), Positives = 302/553 (54%), Gaps = 39/553 (7%)
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P++ + SW L T+ D+ EAI IEM G R D+ +F + A ++L+ G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFR-EAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111
Query: 179 KQIHGVSIKMGYGTH-VSVGNVLMSTYSKCEVTGD--------------------ANKVF 217
+QIH ++K GYG+ V+V N L++ Y KC GD + +F
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALF 171
Query: 218 RRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
DR+++SW TMIS + +A++ F+ M L+GV + VT ++ A S +
Sbjct: 172 ESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231
Query: 273 EGRMIHGLCIKTNFLSEPS-VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
G+ IH ++ N L E S V + L+ MY ++ +VFD + R I WNA+ISGY
Sbjct: 232 VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGY 291
Query: 332 AQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
A+NGL A+ F +IK + PN T SV+ A ++ G+ H++ I+ L
Sbjct: 292 ARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPAC-VHSLAAIAKGKEIHAYAIRNMLA 350
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
SD VGSAL+DMY K G + S+RVFNE K+ W +I A HG E + FK M
Sbjct: 351 SDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNM 410
Query: 450 ENKGVR-----PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDML 504
+ R P+ +TF++V C +G+I +G +LF M D+ +EP+ DHY+C+VD+L
Sbjct: 411 VAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLL 470
Query: 505 GRVGRLEEAEELVGQIPGG-PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSY 563
GR G+LEEA ELV +P + SLLGACRIH NVE+GE A L+ +EP + Y
Sbjct: 471 GRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHY 530
Query: 564 VLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEE 623
VL+SN+Y+ G W +RK M+ GV+KE G SW + D +H F +GD +HP+SE+
Sbjct: 531 VLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFR--DEVHKFMAGDVSHPQSEQ 588
Query: 624 IYRMAECLGSEMK 636
++ E L +M+
Sbjct: 589 LHGFLETLSEKMR 601
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 185/353 (52%), Gaps = 32/353 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
M MY K G+ D + +F + + D+VSWNT++S F +SD +AL+F M L GV D
Sbjct: 155 MAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDG 214
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT ++ L C E G ++H+ +++ L +VG+AL+ MY ++ RRVFD
Sbjct: 215 VTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFD 274
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHE-KN 174
+ + WNA++SGY ++G +A++ IEM++ GL + + S AC H
Sbjct: 275 HILGRRIELWNAMISGYARNG-LDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAA 333
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
+ GK+IH +I+ + ++VG+ L+ Y+KC + +VF M ++NVI+W +I
Sbjct: 334 IAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMA 393
Query: 235 -----NREDAVSLFKEMRLDG-----VCPNDVTFIGLIHAISIGNLVKEG-----RMIHG 279
E+A+ LFK M + PN+VTFI + A S L+ EG RM H
Sbjct: 394 CGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHD 453
Query: 280 LCIKTNFLSEPSVCN--CLITMYARFESMQDSEKVFDELSCR--EIISWNALI 328
+ EP+ + C++ + R ++++ ++ + + ++ +W++L+
Sbjct: 454 HGV------EPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL 500
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 216/461 (46%), Gaps = 56/461 (12%)
Query: 27 SWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLI 83
SW L +S+D A+S + M + G D + L + G Q+H+
Sbjct: 59 SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAA 118
Query: 84 VKFGLDS---------------------EVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
VKFG S + + NAL+ MY++ GR+ +++ +F+ ++D
Sbjct: 119 VKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRD 178
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSWN ++S ++Q + EA+ M+ +G+ LD V+ S AC H + L++GK+IH
Sbjct: 179 MVSWNTMISSFSQSDRFS-EALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIH 237
Query: 183 GVSIKMGYGTHVS-VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR----- 236
++ S VG+ L+ Y C +VF + R + W MIS
Sbjct: 238 AYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLD 297
Query: 237 EDAVSLFKEM-RLDGVCPNDVTFIGLIHAI--SIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E A+ LF EM ++ G+ PN T ++ A S+ + K G+ IH I+ S+ +V
Sbjct: 298 EKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAK-GKEIHAYAIRNMLASDITVG 356
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK---- 349
+ L+ MYA+ + S +VF+E+ + +I+WN LI +G A++ F ++
Sbjct: 357 SALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGR 416
Query: 350 --ESKPNAYTFGSVLNAVG----AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
E+KPN TF +V A +E ++L + + H H G++ + ++D+ G
Sbjct: 417 GGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMK-HDH----GVEPTSDHYACVVDLLG 471
Query: 404 KRGSIFESQRVFNETQEKSEF----AWTAIISALARHGDYE 440
+ G + E+ + N +EF AW++++ A H + E
Sbjct: 472 RAGQLEEAYELVNTM--PAEFDKVGAWSSLLGACRIHQNVE 510
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 214/658 (32%), Positives = 352/658 (53%), Gaps = 29/658 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP--DIVSWNTVLSGFEKSDDALSFALRMNLI----GVV 54
+ +Y KS A IF ++ N D+VS+++++S F + + L + + GV
Sbjct: 94 ITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVY 153
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVE--- 110
+ ++ + CL F GL L ++K G DS V VG LI M+ + L +
Sbjct: 154 PNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLES 213
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASAC 169
AR+VFD+M K+ V+W +++ Q G Y EAI +EM+ G D + T S C
Sbjct: 214 ARKVFDKMREKNVVTWTLMITRLAQYG-YNDEAIDLFLEMLVSSGYVPDRFTLTGLISVC 272
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
+ L LGK++H I+ G + VG L+ Y+KC + +A KVF M + NV+SWT
Sbjct: 273 AEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWT 332
Query: 230 TMIS--------MNREDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+++ RE A+ +F M L G V PN TF G++ A + G +HG
Sbjct: 333 ALVNGYVRGGGGYERE-AMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQ 391
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
IK + V N L+++YA+ M+ + K FD L + ++S ++ +L +
Sbjct: 392 TIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVS-ETVVDDTNVKDFNLNS 450
Query: 341 VQAFFGVIKE--SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
Q ++ S +++T+ S+L+ GAA ++ G++ H+ ++K+G +D V +AL
Sbjct: 451 EQDLDREVEYVGSGVSSFTYASLLS--GAACIGTIGKGEQIHAMVVKIGFRTDLSVNNAL 508
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+ MY K G+ + +VFN+ ++ + WT+II+ A+HG + F M GV+P+
Sbjct: 509 ISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPND 568
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
+T+++VL+ C G+I + F SM ++ I P +HY+CMVD+LGR G L EA E +
Sbjct: 569 VTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFIN 628
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEM 578
+P V ++ LG+CR+H N ++GE A +++ EP +Y+L+SNLYA +G WE
Sbjct: 629 SMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWED 688
Query: 579 VAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
VA +RK MK K + KE G SW +V + +H F GD HP++++IY + L ++K
Sbjct: 689 VAAIRKNMKQKQITKEAGSSWIEVE--NQVHKFHVGDTLHPKAQQIYEKLDELALKIK 744
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 233/488 (47%), Gaps = 33/488 (6%)
Query: 17 FNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFG 76
FN+ NNP + ++ +D + ++ +T S L C+ + G
Sbjct: 23 FNHFNNPQ--QLHKAITTLNLTDTESTHNNKL---------ITSSLLLKQCIRTKNTHLG 71
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN--KDSVSWNAILSGYT 134
LH + L + + N+LIT+YS+ + A +F M N +D VS+++I+S +
Sbjct: 72 KLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFA 131
Query: 135 QDGD--YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY-G 191
+ + VE L +++ G+ + FT+ AC + G + G +K GY
Sbjct: 132 NNRNCLKAVEMFDQL--LLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFD 189
Query: 192 THVSVGNVLMSTYSK-CEVTG--DANKVFRRMHDRNVISWTTMISM-----NREDAVSLF 243
+HV VG L+ + K C + A KVF +M ++NV++WT MI+ ++A+ LF
Sbjct: 190 SHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLF 249
Query: 244 KEMRL-DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
EM + G P+ T GLI + + G+ +H I++ + + V L+ MYA+
Sbjct: 250 LEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAK 309
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQ--NGLSLAAVQAFFGVIKES--KPNAYTF 358
+Q++ KVFD + ++SW AL++GY + G A++ F ++ + PN +TF
Sbjct: 310 CGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTF 369
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
VL A + D G++ H IK+GL + VG+ L+ +Y K G + +++ F+
Sbjct: 370 SGVLKACASLPDFDF--GEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVL 427
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
EK+ + T + + + S + +E+E G S T+ S+L+ G I KG
Sbjct: 428 FEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGE 487
Query: 479 HLFDSMLK 486
+ ++K
Sbjct: 488 QIHAMVVK 495
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 197/567 (34%), Positives = 318/567 (56%), Gaps = 16/567 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ +V GL ++ L+ S G++ AR++FDE D WNAI+ Y+++
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133
Query: 138 DYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
Y + + MR G+ D +F AC + L IHG IK G+G+ V V
Sbjct: 134 MY--RDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFV 191
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGV 251
N L++ Y+KC G A VF ++ R ++SWT++IS + +A+ +F +MR +GV
Sbjct: 192 QNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGV 251
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ + + ++ A + + +++GR IHG IK EP++ L YA+ + ++
Sbjct: 252 KPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKS 311
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAED 370
FD++ +I WNA+ISGYA+NG + AV F +I + KP++ T S + + +A+
Sbjct: 312 FFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAV--LASAQV 369
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
SL+ Q ++ K SD V ++L+DMY K GS+ ++RVF+ +K W+A+I
Sbjct: 370 GSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMI 429
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
HG +N + M+ GV P+ +TF+ +LT C +G++ +G LF M KD+ I
Sbjct: 430 MGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEI 488
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIAD 550
P +HYSC+VD+LGR G L EA + +IP PG+SV +LL AC+I+ V +GE A+
Sbjct: 489 VPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAAN 548
Query: 551 ALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG-LH 609
L ++P +G YV +SNLYA W+ VA +R M+ KG+ K++G+S V +I+G L
Sbjct: 549 KLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYS---VIEINGKLQ 605
Query: 610 GFSSGDNTHPRSEEIYRMAECLGSEMK 636
F GD +HP ++EI+ + L +K
Sbjct: 606 AFHVGDKSHPMAKEIFDELQRLERRLK 632
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 187/367 (50%), Gaps = 12/367 (3%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTAL 64
GQ A +F+ PD+ WN ++ + +++ D + M GV D T+ L
Sbjct: 102 GQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVL 161
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
C + F +H I+K+G S+V+V N L+ +Y++ G + A+ VFD + ++ V
Sbjct: 162 KACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIV 221
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
SW +I+SGY Q+G VEA+ +M G++ D ++ S A +LE G+ IHG
Sbjct: 222 SWTSIISGYAQNGK-AVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGF 280
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDA 239
IKMG ++ L + Y+KC + A F +M NVI W MIS + E+A
Sbjct: 281 VIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEA 340
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
V+LF M + P+ VT + A + ++ + + K+N+ S+ V LI M
Sbjct: 341 VNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDM 400
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYT 357
YA+ S++ + +VFD S ++++ W+A+I GY +G A+ + V+K++ PN T
Sbjct: 401 YAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAIN-LYHVMKQAGVFPNDVT 459
Query: 358 FGSVLNA 364
F +L A
Sbjct: 460 FIGLLTA 466
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 146/280 (52%), Gaps = 9/280 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAVT 59
+Y K G A +F+ L + IVSW +++SG+ K+ +AL +M GV D +
Sbjct: 198 LYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIA 257
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ L D + G +H ++K GL+ E + +L Y++ G + A+ FD+M
Sbjct: 258 LVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMK 317
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ + WNA++SGY ++G + EA+ M+ + ++ D V+ SA A +LEL +
Sbjct: 318 TTNVIMWNAMISGYAKNG-HAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQ 376
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SM 234
+ K YG+ + V L+ Y+KC A +VF R D++V+ W+ MI
Sbjct: 377 WMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHG 436
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+A++L+ M+ GV PNDVTFIGL+ A + LVKEG
Sbjct: 437 QGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEG 476
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%)
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
+H + H+ ++ GL + + + L++ G I ++++F+E F W AII +
Sbjct: 70 RHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSY 129
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+R+ Y + ++ M GV PD TF VL C
Sbjct: 130 SRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKAC 164
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 292/499 (58%), Gaps = 12/499 (2%)
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
AL+EM +GL ++ + S + C + + G+++H IK Y V + L+ Y+
Sbjct: 464 ALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYN 523
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIG 260
KC GDA +V M +RNV+SWT MIS + +A+ LF EM + G PN+ TF
Sbjct: 524 KCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFAT 583
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
++ + + + + GR IH L IKT+F S V + L+ MYA+ + ++ +VFD L R+
Sbjct: 584 VLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERD 643
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRC 379
++S A+ISGYAQ GL A+ F + +E + N T+ SVL A+ +L HG++
Sbjct: 644 VVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLA--ALDHGRQV 701
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
HSH+++ L ++ ++L+DMY K GS+ S+R+F+ E++ +W A++ ++HG
Sbjct: 702 HSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLG 761
Query: 440 ESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH-IEPSPDHY 497
+ FK M E V+PDS+TFL+VL+ C GM +G +F M+ EP +HY
Sbjct: 762 REAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHY 821
Query: 498 SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
C+VD+ GR GR+EEA E + ++P P ++ SLLGACR+H NV +GE +A L+++E
Sbjct: 822 GCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIES 881
Query: 558 AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNT 617
+G+YV++SNLYA G W+ V +R+ MK K V KE G SW ++ LH F + D +
Sbjct: 882 ENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQT--LHTFHASDRS 939
Query: 618 HPRSEEIYRMAECLGSEMK 636
HPR EE++ L ++K
Sbjct: 940 HPRKEEVFAKVRELSIKIK 958
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 235/446 (52%), Gaps = 25/446 (5%)
Query: 21 NNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
N+PD+ L + +AL L M + G+ + Y + L+ C+ G ++H
Sbjct: 448 NSPDL----KTLCSNRQLKEAL---LEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVH 500
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
+ ++K + VY+ LI +Y++ L +ARRV DEMP ++ VSW A++SGY+Q G Y
Sbjct: 501 AHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRG-YA 559
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EA+ +EM+ G + +F + ++C +LG+QIH + IK + +H+ VG+ L
Sbjct: 560 SEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSL 619
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPND 255
+ Y+K +A +VF + +R+V+S T +IS E+A+ LF+ ++ +G+ N
Sbjct: 620 LDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNY 679
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
VT+ ++ A+S + GR +H ++ + N LI MY++ S+ S ++FD
Sbjct: 680 VTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDS 739
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES---KPNAYTFGSVLNAV--GAAED 370
+ R +ISWNA++ GY+++GL AV+ F ++KE KP++ TF +VL+ G ED
Sbjct: 740 MPERTVISWNAMLVGYSKHGLGREAVE-LFKLMKEENKVKPDSVTFLAVLSGCSHGGMED 798
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAI 429
L+ + K G + + ++D++G+ G + E+ + E + W ++
Sbjct: 799 RGLEIFYEMVNQ--KDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSL 856
Query: 430 ISALARHGDY---ESVMNQFKEMENK 452
+ A H + E V + E+E++
Sbjct: 857 LGACRVHQNVHIGEFVARRLLEIESE 882
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 179/339 (52%), Gaps = 15/339 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
+Y K A + + + ++VSW ++SG+ + + +AL + M + G + T
Sbjct: 521 LYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFT 580
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++T L+ C GF G Q+HSL++K +S ++VG++L+ MY++ G++ EARRVFD +P
Sbjct: 581 FATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D VS AI+SGY Q G EA+ + R+G+R ++V++ S +A L+ G+
Sbjct: 641 ERDVVSCTAIISGYAQLG-LDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGR 699
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI------S 233
Q+H ++ +V + N L+ YSKC + ++F M +R VISW M+
Sbjct: 700 QVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHG 759
Query: 234 MNREDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ RE AV LFK M+ + V P+ VTF+ ++ S G + G I + EP +
Sbjct: 760 LGRE-AVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEI 818
Query: 293 --CNCLITMYARFESMQDSEKVFDELSCREIIS-WNALI 328
C++ ++ R ++++ + ++ + W +L+
Sbjct: 819 EHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 857
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 102/176 (57%), Gaps = 7/176 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K+G+ +A +F+ L D+VS ++SG+ + ++AL R+ G+ +
Sbjct: 620 LDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNY 679
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY++ L+ G Q+HS +++ L V + N+LI MYS+ G L +RR+FD
Sbjct: 680 VTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDS 739
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGH 171
MP + +SWNA+L GY++ G G EA+ L ++M++ ++ D V+F + S C H
Sbjct: 740 MPERTVISWNAMLVGYSKHG-LGREAV-ELFKLMKEENKVKPDSVTFLAVLSGCSH 793
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----SDDALSFALRMNLIGVVFD 56
++MY K G + IF+++ ++SWN +L G+ K + F L V D
Sbjct: 721 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 780
Query: 57 AVTYSTALSFCLDHEGFL-FGLQLHSLIV--KFGLDSEVYVGNALITMYSRWGRLVEARR 113
+VT+ LS C H G GL++ +V K G + E+ ++ ++ R GR+ EA
Sbjct: 781 SVTFLAVLSGC-SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFE 839
Query: 114 VFDEMPNKDSVS-WNAIL 130
+MP + + + W ++L
Sbjct: 840 FIKKMPFEPTAAIWGSLL 857
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 207/667 (31%), Positives = 331/667 (49%), Gaps = 107/667 (16%)
Query: 75 FGLQL-HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGY 133
F QL H ++K GL VY+ N L+ +YS+ G + AR++FDEMP + + SWN +LS Y
Sbjct: 31 FTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAY 90
Query: 134 TQDGDYGV------------------------------EAILALIEMMRKGLRLDHVSFT 163
+ GD +AI + EMMR+G+ + T
Sbjct: 91 AKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLT 150
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
+ ++ + LE GK++H +K+G +VSV N L++ Y+KC A VF RM +
Sbjct: 151 NVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVK 210
Query: 224 NVISWTTMISMNRE------------------------------------DAVSLFKEMR 247
++ SW MI+++ + A+ +F +M
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKML 270
Query: 248 LDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR---- 302
D + P+ T ++ A + + G IH + T F V N LI+MY+R
Sbjct: 271 RDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 303 -----------------------------FESMQDSEKVFDELSCREIISWNALISGYAQ 333
M +++ +FD L R++++W A+I GY Q
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQ 390
Query: 334 NGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
+GL A+ F ++ +E +PN+YT ++L+ A+ SL HG++ H +K G
Sbjct: 391 HGLYGEAINLFRSMVGEEQRPNSYTLAAMLSV--ASSLASLGHGKQIHGSAVKSGEIYSV 448
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
V +AL+ MY K GSI + R F+ + E+ +WT++I ALA+HG E + F+ M
Sbjct: 449 SVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 508
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
+G+RPD IT++ V + C G++++GR FD M I P+ HY+CMVD+ GR G L+
Sbjct: 509 EGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQ 568
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
EA+E + ++P P + SLL ACR++ N+++G+ A+ L+ +EP SG+Y ++NLY+
Sbjct: 569 EAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYS 628
Query: 572 EKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
G WE A +RK MK V+KE GFSW +V +H F D HP+ EIY + +
Sbjct: 629 ACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK--HKVHAFGVEDGIHPQKNEIYITMKKI 686
Query: 632 GSEMKYL 638
E+K +
Sbjct: 687 WDEIKKM 693
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 152/604 (25%), Positives = 262/604 (43%), Gaps = 125/604 (20%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++ Y K G D + F+ L D VSW T++ G++ + A+ M G+
Sbjct: 87 LSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQ 146
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD- 116
T + L+ G ++HS IVK GL V V N+L+ MY++ G + A+ VFD
Sbjct: 147 FTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDR 206
Query: 117 ------------------------------EMPNKDSVSWNAILSGYTQDGDYGVEAILA 146
+M +D V+WN+++SGY Q G Y + A+
Sbjct: 207 MVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRG-YDLRALDM 265
Query: 147 LIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
+M+R L D + S SAC + + L +G+QIH + G+ V N L+S YS
Sbjct: 266 FSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 206 KC------------------EVTG---------------DANKVFRRMHDRNVISWTTMI 232
+C ++ G +A +F + DR+V++WT MI
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMI 385
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ +A++LF+ M + PN T ++ S + G+ IHG +K+ +
Sbjct: 386 VGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEI 445
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSC-REIISWNALISGYAQNGLSLAAVQAFFG 346
SV N LITMYA+ S+ + + FD + C R+ +SW ++I AQ+G + A++ F
Sbjct: 446 YSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS-----ALLD 400
++ E +P+ T+ V +A A L + R + ++K D D I+ + ++D
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHA---GLVNQGRQYFDMMK---DVDKIIPTLSHYACMVD 559
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
++G+ G + QE EF +E + PD +T
Sbjct: 560 LFGRAGLL----------QEAQEF------------------------IEKMPIEPDVVT 585
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVGRLEEAEELVGQ 519
+ S+L+ C I G+ + +L +EP + YS + ++ G+ EEA ++
Sbjct: 586 WGSLLSACRVYKNIDLGKVAAERLLL---LEPENSGAYSALANLYSACGKWEEAAKIRKS 642
Query: 520 IPGG 523
+ G
Sbjct: 643 MKDG 646
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 199/584 (34%), Positives = 315/584 (53%), Gaps = 16/584 (2%)
Query: 75 FGLQLHSLIVKFGLDSEV--YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G +H+ IVK LDS ++ N LI MYS+ AR V P ++ VSW +++SG
Sbjct: 24 LGRVVHARIVK-TLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSG 82
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Q+G + A+ EM R+G+ + +F A + GKQIH +++K G
Sbjct: 83 LAQNGHFST-ALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRIL 141
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMR 247
V VG Y K + DA K+F + +RN+ +W IS + D A+ F E R
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFR 201
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
G PN +TF G ++A S G L+ G +HGL ++ F ++ SV N LI Y + + ++
Sbjct: 202 RIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIR 261
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVG 366
SE +F E+ + +SW +L++ Y QN A + KE + + + SVL+A
Sbjct: 262 SSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACA 321
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
+ L G+ H+H +K ++ + VGSAL+DMYGK G I +S++ F+E EK+
Sbjct: 322 GMAGLEL--GRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTL 379
Query: 427 TAIISALARHGDYESVMNQFKEMENKGV--RPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
++I A G + + F++M +G P+ +TF+S+L+ C R G + G +FDSM
Sbjct: 380 NSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
Y IEP +HYSC+VDMLGR G +E+A E + ++P P +SV +L ACR+HG +
Sbjct: 440 KSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHL 499
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
G A+ L K++P SG++VL+SN +A G W +R+ MK G++K G+SW V
Sbjct: 500 GILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVK- 558
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+ +H F + D +H ++EI M L ++M+ K + ++L
Sbjct: 559 -NQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSL 601
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 216/450 (48%), Gaps = 16/450 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY K + A + ++VSW +++SG ++ AL M GV +
Sbjct: 49 INMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPND 108
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + G Q+H+L VK G +V+VG + MY + +AR++FDE
Sbjct: 109 FTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDE 168
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P ++ +WNA +S DG EAI A IE R G + + ++F +AC L+L
Sbjct: 169 IPERNLETWNAYISNSVTDGRPK-EAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDL 227
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
G Q+HG+ + G+ T VSV N L+ Y KC+ + +F M +N +SW ++++
Sbjct: 228 GMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQ 287
Query: 235 NRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ED A L+ R + V +D ++ A + ++ GR IH +K V
Sbjct: 288 NHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFV 347
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-- 350
+ L+ MY + ++DSE+ FDE+ + +++ N+LI GYA G A+ F +
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGC 407
Query: 351 -SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSI 408
PN TF S+L+A A ++++G + + G++ S ++DM G+ G +
Sbjct: 408 GPAPNYMTFVSLLSACSRAG--AVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMV 465
Query: 409 FESQRVFNETQEKSEFA-WTAIISALARHG 437
++ + K + W A+ +A HG
Sbjct: 466 EQAFEFIKKMPIKPTISVWGALQNACRMHG 495
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 184/382 (48%), Gaps = 18/382 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+MYCK+ D A +F+ + ++ +WN +S + +A+ + IG ++
Sbjct: 150 FDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNS 209
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ L+ C D G+Q+H L+ + G D++V V N LI Y + ++ + +F E
Sbjct: 210 ITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAE 269
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K++VSW ++++ Y Q+ + ++L L ++ + +S SAC LEL
Sbjct: 270 MGMKNAVSWCSLVAAYVQNHEDEKASVLYL-RSRKEIVETSDFMISSVLSACAGMAGLEL 328
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+ IH ++K ++ VG+ L+ Y KC D+ + F M ++N+++ ++I
Sbjct: 329 GRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAH 388
Query: 233 SMNREDAVSLFKEM--RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A++LF++M R G PN +TF+ L+ A S V+ G I +K+ + EP
Sbjct: 389 QGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFD-SMKSTYGIEP 447
Query: 291 SV--CNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNG---LSLAAVQAF 344
+C++ M R ++ + + ++ + IS W AL + +G L + A +
Sbjct: 448 GAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENL 507
Query: 345 FGVIKESKPNAYTFGSVLNAVG 366
F + + N + A G
Sbjct: 508 FKLDPKDSGNHVLLSNTFAAAG 529
>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 218/650 (33%), Positives = 359/650 (55%), Gaps = 33/650 (5%)
Query: 9 QFDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNL----IGVVFDAVTY 60
++D +F+N+ ++V+WNT++S + K+ + FA+ M + V F V
Sbjct: 167 EYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFP 226
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLD--SEVYVGNALITMYSRWGRLVEARRVFDEM 118
+ A S + +GL L K G + +++V ++ I+MY+ G L +RRVFD
Sbjct: 227 AVATSRSIKKANVFYGLML-----KLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSC 281
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEKNLEL 177
++ WN ++ Y Q+ D VE+I +E + K + D V+F AASA + +EL
Sbjct: 282 VERNIEVWNTMIGVYVQN-DCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVEL 340
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+Q HG K + + N LM YS+C + VF M +R+V+SW TMIS +
Sbjct: 341 GRQFHGFVSKNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQ 400
Query: 238 DAVS-----LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + L EM+ G + +T L+ A S + G+ HG I+ E +
Sbjct: 401 NGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFE-GM 459
Query: 293 CNCLITMYARFESMQDSEKVFDE--LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ LI MYA+ ++ S+K+F+ + R+ +WN++ISGY QNG + F ++++
Sbjct: 460 NSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQ 519
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ +PNA T S+L A + L G++ H I+ LD + V SAL+DMY K G+I
Sbjct: 520 NIRPNAVTVASILPACSQVGSVDL--GKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIK 577
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ +F++T+E++ +T +I +HG E ++ F M+ G++PD+I F++VL+ C
Sbjct: 578 YAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACS 637
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV-GQIPGGPGLSV 528
+G++ +G +F+ M + Y+I+PS +HY C+ DMLGRVGR+ EA E V G G +
Sbjct: 638 YSGLVDEGLKIFEDMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAEL 697
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAG--SGSYVLMSNLYAEKGDWEMVAILRKGM 586
SLLG+CR+HG +E+ E +++ L K++ SG VL+SN+YAE+ +W+ V +RKGM
Sbjct: 698 WGSLLGSCRLHGELELAETVSERLAKLDKGKNFSGYEVLLSNMYAEEQNWKSVDRVRKGM 757
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ KG++KEVG S +V ++ F S D HP S EIY + L M+
Sbjct: 758 REKGLKKEVGRSGIEVA--GHVNCFVSRDQEHPHSGEIYDAIDGLAKNMR 805
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 160/582 (27%), Positives = 280/582 (48%), Gaps = 37/582 (6%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIG--VVFDAVT 59
C+ G A +F+ + P V WNT++ GF +AL F RM DA T
Sbjct: 50 CQEGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYT 109
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMY----SRWGRLVE----- 110
YS+ L C + + G +H +++ +S V N+L+ MY + G ++
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYD 169
Query: 111 -ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
R+VFD M K+ V+WN ++S Y + G EA MMR ++ VSF + A
Sbjct: 170 VVRKVFDNMRRKNVVAWNTLISWYVKTGR-NAEACRQFAIMMRMEIKPSPVSFVNVFPAV 228
Query: 170 GHEKNLELGKQIHGVSIKMG--YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
++++ +G+ +K+G Y + V + +S Y++ + +VF +RN+
Sbjct: 229 ATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEV 288
Query: 228 WTTMISMNRE-----DAVSLFKE-MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
W TMI + + +++ LF E + + ++VTF+ A+S V+ GR HG
Sbjct: 289 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGF- 347
Query: 282 IKTNFLSEPSV-CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+ NF P V N L+ MY+R +Q S VF + R+++SWN +IS + QNGL
Sbjct: 348 VSKNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEG 407
Query: 341 VQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKH-GQRCHSHIIKVGLDSDPIVGSALL 399
+ + + K+ Y +V + AA ++ K G++ H +I+ G+ + + S L+
Sbjct: 408 LMLVYEMQKQGFKIDYI--TVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEGM-NSYLI 464
Query: 400 DMYGKRGSIFESQRVFNET--QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
DMY K G I SQ++F + E+ + W ++IS ++G E F++M + +RP+
Sbjct: 465 DMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPN 524
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
++T S+L C + G + G+ L ++ Y ++ + S +VDM + G ++ AE +
Sbjct: 525 AVTVASILPACSQVGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAENMF 583
Query: 518 GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
Q ++ +LG +G MGER + M+ G
Sbjct: 584 SQTKERNSVTYTTMILG----YGQHGMGERAISLFLSMQELG 621
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 153/288 (53%), Gaps = 14/288 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M MY + G K+ +F+++ D+VSWNT++S F ++ D+ L M G D
Sbjct: 364 MVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDY 423
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD- 116
+T + LS + G Q H +++ G+ E + + LI MY++ G + ++++F+
Sbjct: 424 ITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFE-GMNSYLIDMYAKSGLIRISQKLFEG 482
Query: 117 -EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+D +WN+++SGYTQ+G + E L +M+ + +R + V+ S AC ++
Sbjct: 483 SGYAERDQATWNSMISGYTQNG-HTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSV 541
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
+LGKQ+HG SI+ +V V + L+ YSK A +F + +RN +++TTMI
Sbjct: 542 DLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGY 601
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI 277
M E A+SLF M+ G+ P+ + F+ ++ A S LV EG I
Sbjct: 602 GQHGMG-ERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKI 648
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 204/663 (30%), Positives = 340/663 (51%), Gaps = 106/663 (15%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G +H I+K GL VY+ N L+T Y++ G L A VFDEMP K + SWN ++SGY +
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 136 DGDYGVE------------------------------AILALIEMMRKGLRLDHVSFTSA 165
G++ V AI +M+ + + + ++
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC------EVTGD------- 212
S+C + L++G++IH +K+G G+ V V L++ Y+KC +V D
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208
Query: 213 ------------------ANKVFRRMHDRNVISWTTMIS------MNREDAVSLFKEMRL 248
A F +M DR+++SW +MIS N E V K +
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNE 268
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR------ 302
+ P++ T ++ A + + G+ IH ++ + +V N LI+MYA+
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEI 328
Query: 303 -----------------FESMQD----------SEKVFDELSCREIISWNALISGYAQNG 335
F S+ D + ++F++L R++++W A+I GY QNG
Sbjct: 329 ARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNG 388
Query: 336 LSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
L A++ F ++ E +PN+YT ++L +V ++ I L+HG++ H+ IK G S P V
Sbjct: 389 LWNDALELFRLMVNEGPEPNSYTLAAML-SVSSSLTI-LEHGKQIHASAIKAGESSTPSV 446
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKG 453
+AL+ MY K G+I ++RVF+ K E +WT++I ALA+HG + +N F+ M + G
Sbjct: 447 TNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVG 506
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
++PD IT++ VL+ C G++ +GR ++ M + + IEP+ HY+CM+D+ GR G L+EA
Sbjct: 507 MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEA 566
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEK 573
+ +P P SLL +C+IH N ++ + A+ L+ ++P SG+Y+ ++N+Y+
Sbjct: 567 YLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC 626
Query: 574 GDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGS 633
G WE A RK MK +GVRKE G SW + + +H F D HP+ +EIY++ +
Sbjct: 627 GKWENAAQTRKLMKDRGVRKEKGISWIHIK--NEVHAFGVEDVIHPQKDEIYKLMAEIWE 684
Query: 634 EMK 636
E+K
Sbjct: 685 EIK 687
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 149/551 (27%), Positives = 264/551 (47%), Gaps = 92/551 (16%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y K G F+ + + + + D VSW ++ G+ + D+A+ +M V T
Sbjct: 86 YAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTV 145
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD---- 116
S LS C ++ G ++HS +VK GL S V V +L+ MY++ G V A+ VFD
Sbjct: 146 SNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTV 205
Query: 117 ---------------------------EMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
+MP++D VSWN+++SGY+Q G Y +EA++ +
Sbjct: 206 KNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQG-YNLEALVIFSK 264
Query: 150 MMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK-- 206
M+ + L+ D+ + S SAC + + L +GKQIH ++ T +VGN L+S Y+K
Sbjct: 265 MLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSG 324
Query: 207 -CEV------------------------------TGDANKVFRRMHDRNVISWTTMISMN 235
E+ A ++F ++ DR+V++WT MI
Sbjct: 325 GVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGY 384
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ DA+ LF+ M +G PN T ++ S +++ G+ IH IK S P
Sbjct: 385 VQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTP 444
Query: 291 SVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N LI MYA+ ++ +++VFD + +EI+SW ++I AQ+GL A+ F ++
Sbjct: 445 SVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLS 504
Query: 350 ES-KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYG 403
KP+ T+ VL+A VG E G++ ++ + +V + +P + + ++D+YG
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVE-----QGRKYYNMMTEVH-EIEPTLSHYACMIDLYG 558
Query: 404 KRGSIFESQRVFNETQ--EKSEFAWTAIISA--LARHGDYESVMNQFKEMENKGVRPDSI 459
+ G + + +F E+ E AW +++++ + ++ D V + + + G +
Sbjct: 559 RAG-LLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYL 617
Query: 460 TFLSVLTVCGR 470
+V + CG+
Sbjct: 618 ALANVYSACGK 628
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 197/379 (51%), Gaps = 56/379 (14%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS----FALRMNLIGVVFD 56
+++Y +SGQF+ A F + + DIVSWN+++SG+ + L F+ +N + D
Sbjct: 215 ISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPD 274
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWG-----RLV-- 109
T ++ LS C + E G Q+H+ I++ ++ VGNALI+MY++ G RL+
Sbjct: 275 NFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVE 334
Query: 110 --------------------------EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEA 143
AR +F+++ ++D V+W A++ GY Q+G + +A
Sbjct: 335 HNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWN-DA 393
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
+ M+ +G + + + S LE GKQIH +IK G + SV N L++
Sbjct: 394 LELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAM 453
Query: 204 YSKCEVTGDANKVFRRMHD-----RNVISWTTMISMNRE-----DAVSLFKEMRLDGVCP 253
Y+K TG+ N V +R+ D + ++SWT+MI + +A++LF+ M G+ P
Sbjct: 454 YAK---TGNIN-VAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKP 509
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN--CLITMYARFESMQDSEK 311
+ +T++G++ A + LV++GR + + + + + EP++ + C+I +Y R +Q++
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEI-EPTLSHYACMIDLYGRAGLLQEAYL 568
Query: 312 VFDELSCR-EIISWNALIS 329
+ + + I+W +L++
Sbjct: 569 FIESMPIEPDNIAWGSLLA 587
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 208/635 (32%), Positives = 336/635 (52%), Gaps = 27/635 (4%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYST 62
KSG+ AL +F+ + ++V+W T +SG ++ + A + M GV + +
Sbjct: 54 KSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNA 113
Query: 63 ALSFCLDHEGFL--FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
AL+ C G Q+HSL V+ G ++ ++G+ LI +YSR G + A VF M
Sbjct: 114 ALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEA 173
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
D V + +++S ++GD A+ L +MMR+GL+ + + TS + C +G+Q
Sbjct: 174 PDVVGYTSLVSALCRNGDLA-RAVEVLCQMMRQGLQPNEHTMTSMLAECPRM----IGEQ 228
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----N 235
IHG +K+ V L+ YS+ A VF + +NV+SW +M+ +
Sbjct: 229 IHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGR 288
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLSEPSVC 293
EDA+ +F EM + V PN+ F +I++G V GR IH IK N +++ V
Sbjct: 289 LEDALRVFSEMISEAVEPNEFAF-----SIALGACGSVCLGRQIHCSAIKCNLMTDIRVS 343
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N L++MY R + + E V ++ +++SW A IS QNG S AV + E
Sbjct: 344 NALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFT 403
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN Y F S L++ A+ L G++ H +K+G D G+AL++MY K G I ++
Sbjct: 404 PNDYAFSSGLSS--CADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSAR 461
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
F+ +W ++I LA+HG V+ F EM + G +PD TF++VL C G
Sbjct: 462 LAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAG 521
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ +G F M Y + P+P HY+CM+DMLGR GR +EA ++ +P P + + ++L
Sbjct: 522 LVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTL 581
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L +C++H N+++G+ D LM++ S SYVLMSNLYA +W+ +R+ M GV+
Sbjct: 582 LASCKLHKNLDIGKLATDKLMELSERDSASYVLMSNLYAMHEEWQDAERVRRRMDEIGVK 641
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
K+ G+SW +V + + F + D +H S IY+M
Sbjct: 642 KDAGWSWIEVK--NEVSTFVARDTSHSDSASIYQM 674
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 157/311 (50%), Gaps = 13/311 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y + G FD A +F NL++ ++VSW +++ + +DAL M V +
Sbjct: 249 IDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNE 308
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+S AL C G Q+H +K L +++ V NAL++MY R G + E V +
Sbjct: 309 FAFSIALGAC---GSVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGK 365
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ N D VSW A +S Q+G + +A+ L++M +G + +F+S S+C L+
Sbjct: 366 IENPDLVSWTAAISANFQNG-FSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQ 424
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNR 236
G+Q+H +++K+G V GN L++ YSKC G A F M+ +V+SW ++I + +
Sbjct: 425 GRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQ 484
Query: 237 EDAVSL----FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI-KTNFLSEPS 291
A +L F EM G P+D TFI ++ + LVKEG L + PS
Sbjct: 485 HGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPS 544
Query: 292 VCNCLITMYAR 302
C+I M R
Sbjct: 545 HYACMIDMLGR 555
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 87/232 (37%), Gaps = 46/232 (19%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDA 57
+NMY K GQ A F+ +N D++SWN+++ G + A L M G D
Sbjct: 448 INMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDD 507
Query: 58 VTYSTALSFCLDHEGFLF-GLQLHSLIV-KFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T+ L C +H G + G L+ ++GL +I M R GR EA +
Sbjct: 508 STFIAVLVGC-NHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMI 566
Query: 116 DEMP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
MP D + W +L ++C KN
Sbjct: 567 KNMPFEPDVLIWKTLL------------------------------------ASCKLHKN 590
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMST-YSKCEVTGDANKVFRRMHDRNV 225
L++GK M S VLMS Y+ E DA +V RRM + V
Sbjct: 591 LDIGKL--ATDKLMELSERDSASYVLMSNLYAMHEEWQDAERVRRRMDEIGV 640
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 209/645 (32%), Positives = 350/645 (54%), Gaps = 17/645 (2%)
Query: 3 MYCKSGQFDKALCIFNNL-NNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAV 58
MY G D+A +F+ + + VSWN ++S F K+D DA+ M GV +
Sbjct: 144 MYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEF 203
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+S ++ C G ++H+++V+ G D +V+ NAL+ MYS+ G + A VF ++
Sbjct: 204 GFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKV 263
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS--AASACGHEKNLE 176
P D VSWNA +SG G + A+ L++M GL + + +S A A
Sbjct: 264 PKTDVVSWNAFISGCVLHG-HDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFA 322
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
LG+QIHG IK + +G L+ Y+K + DA KVF + ++++ W +IS
Sbjct: 323 LGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCS 382
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+++SLF MR +G N T ++ + + + + +H L K FLS+
Sbjct: 383 HGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSH 442
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI Y + ++ + KVF+E S II++ ++I+ +Q A++ F ++++
Sbjct: 443 VVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 502
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ + S+LNA + + + G++ H+H+IK +D G+AL+ Y K GSI +
Sbjct: 503 LEPDPFVLSSLLNACASLS--AYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIED 560
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ F+ +K +W+A+I LA+HG + ++ F+ M ++ + P+ IT SVL C
Sbjct: 561 ADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNH 620
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ + + F SM + + I+ + +HYSCM+D+LGR G+L++A ELV +P +V
Sbjct: 621 AGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWG 680
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL A R+H + E+G+ A+ L +EP SG++VL++N YA G W+ VA +RK MK
Sbjct: 681 ALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSK 740
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
V+KE SW ++ D +H F GD +HPR+ +IY E LG M
Sbjct: 741 VKKEPAMSWVELK--DRVHTFIVGDKSHPRARDIYAKLEELGDLM 783
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 159/569 (27%), Positives = 281/569 (49%), Gaps = 27/569 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y K A +F+ +P VSW+++++ + + +AL+ M GV +
Sbjct: 44 LSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNE 103
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
L C G G+Q+H++ V GL +++V NAL+ MY +G + EARRVFDE
Sbjct: 104 FALPIVLK-CAPDAGL--GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDE 160
Query: 118 MP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
++++VSWN ++S + ++ D +A+ EM+ G+R + F+ +AC ++LE
Sbjct: 161 AARDRNAVSWNGMMSAFVKN-DRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLE 219
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+++H + ++ GY V N L+ YSK A VF ++ +V+SW IS
Sbjct: 220 AGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCV 279
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIH--AISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + A+ L +M+ G+ PN T ++ A + GR IHG IK S+
Sbjct: 280 LHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSD 339
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ L+ MYA++ + D+ KVF+ + ++++ WNALISG + G ++ F + K
Sbjct: 340 DYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRK 399
Query: 350 E-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E S N T +VL + + E IS + H+ K+G SD V + L+D Y K +
Sbjct: 400 EGSDINRTTLAAVLKSTASLEAIS--DTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCL 457
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ +VF E + A+T++I+AL++ E + F EM KG+ PD S+L C
Sbjct: 458 RYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNAC 517
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYS--CMVDMLGRVGRLEEAEELVGQIPGGPGL 526
+G+ + ++K + D ++ +V + G +E+A+ +P G+
Sbjct: 518 ASLSAYEQGKQVHAHLIKRKFMT---DVFAGNALVYTYAKCGSIEDADLAFSGLP-DKGV 573
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKM 555
+++G HG+ G+R D +M
Sbjct: 574 VSWSAMIGGLAQHGH---GKRALDVFRRM 599
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 152/565 (26%), Positives = 255/565 (45%), Gaps = 53/565 (9%)
Query: 71 EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL 130
+ G +H+ ++K GL N L++ YS+ ARRVFDE P+ VSW++++
Sbjct: 18 QSLFLGAHIHAHLLKSGLLHAFR--NHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLV 75
Query: 131 SGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
+ Y+ + EA+ A M +G+R + + C + LG Q+H V++ G
Sbjct: 76 TAYSNNA-LPREALAAFRAMRARGVRCNEFALPIVLK-CAPDAG--LGVQVHAVAVSTGL 131
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVF-RRMHDRNVISWTTMISM-----NREDAVSLFK 244
+ V N L++ Y +A +VF DRN +SW M+S DAV LF
Sbjct: 132 SGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFG 191
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
EM GV PN+ F +++A + ++ GR +H + ++T + + N L+ MY++
Sbjct: 192 EMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLG 251
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVL 362
+ + VF ++ +++SWNA ISG +G A++ +K S PN +T S+L
Sbjct: 252 DIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQ-MKSSGLVPNVFTLSSIL 310
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
A A + G++ H +IK DSD +G AL+DMY K G + ++++VF K
Sbjct: 311 KACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKD 370
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
W A+IS + G + ++ F M +G + T +VL I +
Sbjct: 371 LLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHA 430
Query: 483 -----SMLKDYHI----------------------EPSPDH---YSCMVDMLGRVGRLEE 512
L D H+ E S D+ ++ M+ L + E+
Sbjct: 431 LAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGED 490
Query: 513 AEELVGQIPGG---PGLSVLQSLLGACRIHGNVEMGERIADALMK---MEPAGSGSYVLM 566
A +L ++ P VL SLL AC E G+++ L+K M +G+ ++
Sbjct: 491 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVY 550
Query: 567 SNLYAEKGDWEMVAILRKGMKSKGV 591
+ YA+ G E + G+ KGV
Sbjct: 551 T--YAKCGSIEDADLAFSGLPDKGV 573
>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 695
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 213/644 (33%), Positives = 351/644 (54%), Gaps = 36/644 (5%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYST 62
KSG AL +F+ + +IV+W + +SG ++ + A++ M GV + ++
Sbjct: 39 KSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAPNDFAFNA 98
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
AL+ C D G Q+HSL V+ G + +VG++L+ +YSR G L A+ VFD M + D
Sbjct: 99 ALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPD 158
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
V + +++S + + G++ + A+ L +M+R+G+ + + S +C LG+Q+H
Sbjct: 159 VVGYTSLVSAFCRSGEFEL-AVDTLHQMLRQGVEPNEHTMASILGSCC---PFVLGEQVH 214
Query: 183 GVSIK-MG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN----- 235
IK MG + + + L+ YS+ A VF +H +NV++W +M+ ++
Sbjct: 215 AYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGR 274
Query: 236 REDAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLSEPSV 292
EDA+ +F +M +GV PN+ F +I++G + GR +H IK N S+ V
Sbjct: 275 PEDALQVFDDMISEGVVEPNEFAF-----SIALGACGSIALGRQLHSSAIKRNLTSDLRV 329
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L++MY R +Q+ E V ++ +I+SW IS QNG S A+ A ++
Sbjct: 330 SNALLSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAI-ALLSMLHSRG 388
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
PN Y F S L++ A+ L G++ H +K+G D G+AL+++Y K G I
Sbjct: 389 LMPNDYAFSSALSSC--ADLALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAP 446
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN-KGVRPDSITFLSVLTVCG 469
++ F+ + +W ++I A+HGD + F EM + +G PD +FL VL C
Sbjct: 447 AKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACN 506
Query: 470 RNGMIHKGRHLFDSMLK--DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
GM+++G LF ++ + PSP HY+C+VDM+GR GR ++A LV ++P PG
Sbjct: 507 HAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPGAL 566
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAG----SGSYVLMSNLYAEKGDWEMVAILR 583
+ ++LL +CR+HGN+E GE A+ LM++ G S SYVLMS ++A +G+W +R
Sbjct: 567 IWKTLLASCRLHGNLETGELAAERLMELSEGGEDRDSASYVLMSGIHAMRGEWRDAYRVR 626
Query: 584 KGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
+ M GVRKE G SW +V + +H F + D +HP S IY++
Sbjct: 627 RRMDEAGVRKEAGCSWVEVH--NEVHTFVARDKSHPDSASIYQI 668
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 176/349 (50%), Gaps = 18/349 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVV-FD 56
++ Y ++ +FD A +FNNL+ ++V+W +++ + +DAL M GVV +
Sbjct: 235 IDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDMISEGVVEPN 294
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+S AL C G QLHS +K L S++ V NAL++MY R + E V
Sbjct: 295 EFAFSIALGAC---GSIALGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQELEAVLK 351
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
++ N D VSW +S Q+G + +AI L + +GL + +F+SA S+C L+
Sbjct: 352 DIENPDIVSWTTAISANFQNG-FSEKAIALLSMLHSRGLMPNDYAFSSALSSCADLALLD 410
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+Q H +++K+G + GN L++ YSKC A F M R+V SW ++I
Sbjct: 411 QGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYA 470
Query: 237 ED-----AVSLFKEMR-LDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSE 289
+ A+ +F EMR + G P++ +F+G++ A + +V EG + + + +
Sbjct: 471 QHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAGMVNEGVALFRAIASHSQHGAT 530
Query: 290 PSVCN--CLITMYARFESMQDSEKVFDELSCRE-IISWNALISGYAQNG 335
PS + C++ M R D+ ++ +E+ R + W L++ +G
Sbjct: 531 PSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPGALIWKTLLASCRLHG 579
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRM-----NLIGVVF 55
+N+Y K GQ A F+ +++ D+ SWN+++ G+ + DA S AL++ ++ G
Sbjct: 435 INLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHGDA-SMALQVFGEMRSIRGTEP 493
Query: 56 DAVTYSTALSFCLDHEGFLF-GLQLHSLIV---KFGLDSEVYVGNALITMYSRWGRLVEA 111
D ++ L+ C +H G + G+ L I + G ++ M R GR +A
Sbjct: 494 DESSFLGVLAAC-NHAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDA 552
Query: 112 RRVFDEMPNKD-SVSWNAILS-----GYTQDGDYGVEAILALIE 149
R+ +EMP + ++ W +L+ G + G+ E ++ L E
Sbjct: 553 LRLVEEMPFRPGALIWKTLLASCRLHGNLETGELAAERLMELSE 596
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 53/236 (22%)
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP-- 456
LD K GS+ ++ +F+ K+ AWT+ +S L R+G E+ M F +M GV P
Sbjct: 34 LDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAPND 93
Query: 457 ---------------------------------DSITFLSVLTVCGRNGMIHKGRHLFDS 483
DS S++ + R G + + +FD
Sbjct: 94 FAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDR 153
Query: 484 MLKDYHIEPSPD--HYSCMVDMLGRVGRLEEAEELVGQIPGG---PGLSVLQSLLGACRI 538
M SPD Y+ +V R G E A + + Q+ P + S+LG+C
Sbjct: 154 M-------ESPDVVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSC-- 204
Query: 539 HGNVEMGERIADALMKMEPAGSGSYVLMSNL---YAEKGDWEMVAILRKGMKSKGV 591
+GE++ ++K S S S L Y+ +++M + + K V
Sbjct: 205 -CPFVLGEQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNV 259
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 203/561 (36%), Positives = 307/561 (54%), Gaps = 34/561 (6%)
Query: 98 LITMYSRWGRLVEARRVFD----------EMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
LI +YS+ G L AR +FD + PN S N +L Y G EAI
Sbjct: 64 LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPN--SFLCNTMLRAYANAGR-SYEAIDLY 120
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
I M R G+ +++ ++ C E G+ +HG ++ G+G+ + V L+ Y+KC
Sbjct: 121 IYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKC 180
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLI 262
GDA++VF RM R+V+ WT MI++ + A+ LF++M+ +G +++T I +
Sbjct: 181 GEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISV- 239
Query: 263 HAISIGNLVKEGRM---IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
A ++G L +GRM +HG + F+ + SV N ++ MYA+ +++ + VFD + R
Sbjct: 240 -ASAVGQL-GDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEER 297
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKH-GQ 377
ISWN+++SGY QNG A+ F + E PN T L V A + KH G+
Sbjct: 298 NGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVT---ALIMVSACSYLGSKHLGR 354
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN--ETQEKSEFAWTAIISALAR 435
+ H+ +I +D D + +A++DMY K G + + +FN E E+ +W +IS
Sbjct: 355 KLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGV 414
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
HG + + F M+ +GV P+ ITF S+L+ C G+I +GR F M K + P
Sbjct: 415 HGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMK 473
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM 555
HY+CMVDMLGR G L EA L+ +IP P V +LL ACRIHGN E+GE A+ L ++
Sbjct: 474 HYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQL 533
Query: 556 EPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGD 615
EP +G YVLMSN+YA W+ V ++R+ MKS+G++K FS + G +HGF + D
Sbjct: 534 EPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFG--TEVHGFHTAD 591
Query: 616 NTHPRSEEIYRMAECLGSEMK 636
+ P E+YR E L EMK
Sbjct: 592 QSSPYYREVYRKVESLAIEMK 612
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 233/458 (50%), Gaps = 23/458 (5%)
Query: 3 MYCKSGQFDKALCIFNNL--------NNPDIVSWNTVLSGFE---KSDDALSFALRMNLI 51
+Y K G A +F++ P+ NT+L + +S +A+ + M +
Sbjct: 67 LYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRM 126
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
GV + TY L C G +FG +H +V+ G S+++V AL+ MY++ G + +A
Sbjct: 127 GVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDA 186
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
VFD M +D V W A+++ Y Q + ++A++ +M +G D ++ S ASA G
Sbjct: 187 HEVFDRMLIRDVVCWTAMITLYEQ-AERPLKALMLFRKMQEEGFLGDEITAISVASAVGQ 245
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+ + +HG ++ G+ VSVGN ++ Y+KC A VF RM +RN ISW +M
Sbjct: 246 LGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSM 305
Query: 232 ISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+S + DA+SLF +M+ PN VT + ++ A S GR +H I +
Sbjct: 306 LSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKM 365
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFD--ELSCREIISWNALISGYAQNGLSLAAVQAF 344
+ ++ N ++ MY + + + ++F+ EL R++ SWN LISGY +G A++ F
Sbjct: 366 DIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELF 425
Query: 345 FGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ E +PN TF S+L+A A I G++C + + K+ + + + ++DM G
Sbjct: 426 SRMQVEGVEPNDITFTSILSACSHAGLID--EGRKCFADMTKLSVRPEMKHYACMVDMLG 483
Query: 404 KRGSIFESQRVFNETQEK-SEFAWTAIISALARHGDYE 440
+ G + E+ R+ + + S+ W A++ A HG+ E
Sbjct: 484 RAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTE 521
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 166/339 (48%), Gaps = 12/339 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G+ A +F+ + D+V W +++ +E+++ AL +M G + D
Sbjct: 174 VDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDE 233
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T + S + +H V G +V VGN+++ MY++ G + AR VFD
Sbjct: 234 ITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDR 293
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++ +SWN++LSGYTQ+G +A+ +M + V+ SAC + + L
Sbjct: 294 MEERNGISWNSMLSGYTQNGR-PTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHL 352
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR--RMHDRNVISWTTMIS-- 233
G+++H I ++ N +M Y KC A ++F + +R+V SW +IS
Sbjct: 353 GRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGY 412
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ ++A+ LF M+++GV PND+TF ++ A S L+ EGR K + E
Sbjct: 413 GVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEM 472
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALI 328
C++ M R + ++ ++ ++ R W AL+
Sbjct: 473 KHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALL 511
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 201/605 (33%), Positives = 328/605 (54%), Gaps = 26/605 (4%)
Query: 40 DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALI 99
+ALSF G ++ Y L C+D + ++H+ IVK G + ++ L+
Sbjct: 56 EALSFIRE----GTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLV 111
Query: 100 TMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH 159
+Y++ G + AR+VFDE+P ++ VSW +++GY D + A+ EM+ G +
Sbjct: 112 NVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPEL-AVQVFREMLEAGAYPTN 170
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR 219
+ +A SA + ELGKQIHG SIK S+GN L S YSKC A K FRR
Sbjct: 171 YTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRR 230
Query: 220 MHDRNVISWTTMISM---NREDAVSL--FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+ D+NVISWTT+IS N E A L F EM + V PN+ T + + + G
Sbjct: 231 IRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIG 290
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ- 333
IH L IK F S + N ++ +Y + + +++K+FDE+ +++WNA+I+G+A+
Sbjct: 291 TQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARM 350
Query: 334 ---NGLSLAAVQ------AFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
LAA Q + F + S KP+ +TF SVL+ + +L+ G++ H+
Sbjct: 351 MDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLV--ALEQGEQVHAQ 408
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
IK G SD +VG+AL++MY K GSI + + F E ++ +WT++I+ A++G +
Sbjct: 409 TIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQA 468
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
+ F++M GVRP+ ITF+ VL+ C GM+ + F M +Y I P DHY+C++D
Sbjct: 469 LLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLID 528
Query: 503 MLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGS 562
M R+GRL+EA + + ++ P + L+ CR G +E+G A+ L+ ++P + +
Sbjct: 529 MFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTET 588
Query: 563 YVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSE 622
Y L+ N+Y G W+ V+ +RK MK + + + +SW + D ++ F +H +S
Sbjct: 589 YNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIK--DKIYSFKRNARSHAQSG 646
Query: 623 EIYRM 627
E+Y +
Sbjct: 647 EMYEL 651
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 239/465 (51%), Gaps = 31/465 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+N+Y K G + A +F+ L ++VSW T+++G+ K + A+ M G
Sbjct: 111 VNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTN 170
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T TALS D G Q+H +K+ ++ + +GN+L ++YS+ G L A + F
Sbjct: 171 YTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRR 230
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +K+ +SW ++S + +G+ + +EM+ + + + + TSA S C ++L++
Sbjct: 231 IRDKNVISWTTVISAWGDNGE-AATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDI 289
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G QIH ++IK+G+ +++ + N +M Y KC +A K+F M ++++W MI+
Sbjct: 290 GTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHAR 349
Query: 234 ---MNRED---------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
++D A+S+F ++ G+ P+ TF ++ S +++G +H
Sbjct: 350 MMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQT 409
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IKT FLS+ V L+ MY + S++ + K F E+S R +ISW ++I+GYAQNG A+
Sbjct: 410 IKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQAL 469
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAA--EDISLKHGQRCHSHIIKVGLDSDPIVG--S 396
F + + +PN TF VL+A A D +L + Q ++K P++ +
Sbjct: 470 LLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQ-----MMKNEYKITPVMDHYA 524
Query: 397 ALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
L+DM+ + G + E+ E E +EF W+ +I+ G E
Sbjct: 525 CLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLE 569
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 197/682 (28%), Positives = 355/682 (52%), Gaps = 82/682 (12%)
Query: 24 DIVSWNTVLSGFE------KSDDALSFALR-MNLIGVVFDAVTYSTALSFCLDHEGFLFG 76
D VSW T++SG+ +S + S +R N G +D ++++ + C
Sbjct: 106 DSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLA 165
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSR---------------------WGRLV------ 109
+QLH+L+ K G E + N+++ MY + W ++
Sbjct: 166 IQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQM 225
Query: 110 ----EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
+A ++F+ MP +D VSWN ++S ++Q G +GV+ + +EM +G + +++ S
Sbjct: 226 YGPYKALQIFNRMPERDEVSWNTLISIFSQHG-FGVQCLAMFVEMCNQGFSPNFMTYGSV 284
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
SAC +L+ G +H ++M + + GN L+ Y+KC A +VF+ + + +
Sbjct: 285 LSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDH 344
Query: 226 ISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
ISW ++I+ EDA+ LF +MR V ++ ++ S + G ++HG
Sbjct: 345 ISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGY 404
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVF--------------------------- 313
IK+ S V N +ITMYA+ ++ VF
Sbjct: 405 TIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKA 464
Query: 314 ----DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
D + R I++WN+++S Y QNG S ++ + + +P+ TF + ++ A
Sbjct: 465 RGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTT---SIRAC 521
Query: 369 EDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
D+++ K G + +H K GL + V ++++ MY + G I E++ F+ +K +W
Sbjct: 522 ADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWN 581
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
A+++A A++G V++ F++M +P+ I+++SVL+ C G++ +G+H FDSM +
Sbjct: 582 AMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRV 641
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGER 547
+ I P+ +H+SCMVD+LGR G LE+A++L+ +P P +V +LLG+CR+H ++ + E
Sbjct: 642 FGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAET 701
Query: 548 IADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG 607
A LM+++ GS YVL+SN+Y+E G+ + VA +RK MK KG+R G SW +V +
Sbjct: 702 AAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVD--NR 759
Query: 608 LHGFSSGDNTHPRSEEIYRMAE 629
+H F+ + +HP+ +E+Y E
Sbjct: 760 VHVFTVDETSHPQIKEVYLKLE 781
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 143/527 (27%), Positives = 241/527 (45%), Gaps = 79/527 (14%)
Query: 3 MYCKSGQFD-------------------------------KALCIFNNLNNPDIVSWNTV 31
MY K G D KAL IFN + D VSWNT+
Sbjct: 190 MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTL 249
Query: 32 LSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGL 88
+S F + L+ + M G + +TY + LS C +G LH+ I++
Sbjct: 250 ISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEH 309
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
++ GN LI MY++ G L A+RVF + D +SWN++++G G G +A++
Sbjct: 310 SLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFG-LGEDALILFN 368
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
+M R + LD + C G+ +HG +IK G G+ VGN +++ Y+KC
Sbjct: 369 QMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCG 428
Query: 209 VTGDANKVFRRMHDRNVISWTTMIS-MNR------------------------------- 236
T A+ VFR M RN ISWT MI+ +R
Sbjct: 429 DTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQ 488
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E+ + L+ MR +GV P+ +TF I A + +VK G + K SV
Sbjct: 489 NGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSV 548
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ES 351
N ++TMY+R +++++ FD + +++ISWNA+++ +AQNGL + + F ++K E
Sbjct: 549 ANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTEC 608
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFE 410
KPN ++ SVL+ G + + G+ + +V G+ S ++D+ G+ G + +
Sbjct: 609 KPNHISYVSVLS--GCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQ 666
Query: 411 SQRVFNETQEK-SEFAWTAIISALARHGDY---ESVMNQFKEMENKG 453
++ + K + W+A++ + H D E+ + E++ +G
Sbjct: 667 AKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEG 713
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/548 (25%), Positives = 237/548 (43%), Gaps = 109/548 (19%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWG------------------------------- 106
+LH+ ++ GLDS +++ N L+ MYS G
Sbjct: 29 KLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSS 88
Query: 107 RLVEARRVFDEMP--NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK----GLRLDHV 160
R+ +A ++FDEMP KDSVSW ++SGY+Q+G + + M+R G D
Sbjct: 89 RMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNG-FHSRSFETFSLMIRDTNDGGKNYDPF 147
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC------------- 207
SFTS ACG + L Q+H + K+G+G + N ++ Y KC
Sbjct: 148 SFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDI 207
Query: 208 ----------------EVTG--DANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFK 244
++ G A ++F RM +R+ +SW T+IS+ + +++F
Sbjct: 208 ERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFV 267
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
EM G PN +T+ ++ A + + +K G +H ++ + N LI MYA+
Sbjct: 268 EMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCG 327
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLN 363
+ +++VF L + ISWN+LI+G GL A+ F + + S + + ++L
Sbjct: 328 CLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILG 387
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
+ S G+ H + IK G+ S VG+A++ MY K G ++ VF ++
Sbjct: 388 VCSGPDYAST--GELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNT 445
Query: 424 FAWTAIISALARHGDY-----------------------ESVMNQFKE--------MENK 452
+WTA+I+A +R GD V N F E M +
Sbjct: 446 ISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSN 505
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
GV+PD ITF + + C ++ G + K + + + + +V M R G ++E
Sbjct: 506 GVQPDWITFTTSIRACADLAIVKLGMQVVTHATK-FGLSLNVSVANSIVTMYSRCGLIKE 564
Query: 513 AEELVGQI 520
A+ I
Sbjct: 565 AKNTFDSI 572
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 153/314 (48%), Gaps = 40/314 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
++MY K G D A +F +L D +SWN++++G F +DAL +M VV D
Sbjct: 320 IDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDE 379
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMY--------------- 102
T L C + G LH +K G+ S VGNA+ITMY
Sbjct: 380 FILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRL 439
Query: 103 ----------------SRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILA 146
SR G + +AR FD MP ++ V+WN++LS Y Q+G + E +
Sbjct: 440 MPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNG-FSEEGLKL 498
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
+ M G++ D ++FT++ AC ++LG Q+ + K G +VSV N +++ YS+
Sbjct: 499 YVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSR 558
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSL-----FKEMRLDGVCPNDVTFIGL 261
C + +A F + D+++ISW M++ ++ + + F++M PN ++++ +
Sbjct: 559 CGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSV 618
Query: 262 IHAISIGNLVKEGR 275
+ S LV EG+
Sbjct: 619 LSGCSHMGLVAEGK 632
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 179/435 (41%), Gaps = 78/435 (17%)
Query: 162 FTSAASACGH-EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
F A C K+ + +++H I G + + + N L+ YS C +T DA +VF+
Sbjct: 10 FYDAFKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQET 69
Query: 221 HDRNVISWTTMI-----SMNREDAVSLFKEMR------------LDGVCPNDV------T 257
H RN+ +W TMI S DA LF EM + G N T
Sbjct: 70 HHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFET 129
Query: 258 FIGLIH----------AISIGNLVK------EGRM---IHGLCIKTNFLSEPSVCNCLIT 298
F +I S +++K + R+ +H L K F E + N ++
Sbjct: 130 FSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVG 189
Query: 299 MYARFESMQDSE-------------------------------KVFDELSCREIISWNAL 327
MY + + +E ++F+ + R+ +SWN L
Sbjct: 190 MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTL 249
Query: 328 ISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
IS ++Q+G + + F + + PN T+GSVL+A + D LK G H+ I+++
Sbjct: 250 ISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSD--LKWGAHLHARILRM 307
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
D + G+ L+DMY K G + ++RVF +E +W ++I+ + G E + F
Sbjct: 308 EHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILF 367
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
+M V D ++L VC G L +K +P + ++ M +
Sbjct: 368 NQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVG-NAIITMYAK 426
Query: 507 VGRLEEAEELVGQIP 521
G ++A+ + +P
Sbjct: 427 CGDTDKADLVFRLMP 441
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
++ H+ +I GLDS + + LL MY G ++ +VF ET ++ F W +I AL
Sbjct: 27 ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86
Query: 436 HGDYESVMNQFKEMENKGVR-PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH---IE 491
F EM VR DS+++ ++++ +NG + F M++D +
Sbjct: 87 SSRMSDAEKLFDEMP---VRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKN 143
Query: 492 PSPDHYSCMVDMLGRVG--RLE-EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
P ++ ++ G +G RL + LV ++ G + S++G G+V++ E +
Sbjct: 144 YDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETV 203
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS----------DDALSFALRMNL 50
+ MY + G +A F+++++ D++SWN +L+ F ++ +D L + N
Sbjct: 553 VTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNH 612
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQ--LHSLIVKFGLDSEVYVGNALITMYSRWGRL 108
I +Y + LS C H G + + S+ FG+ + ++ + R G L
Sbjct: 613 I-------SYVSVLSGC-SHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLL 664
Query: 109 VEARRVFDEMPNKDSVS-WNAIL 130
+A+ + + MP K + + W+A+L
Sbjct: 665 EQAKDLIEGMPFKPNATVWSALL 687
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 214/654 (32%), Positives = 329/654 (50%), Gaps = 23/654 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+NMY K G A +F+ + ++VS+ T++ + D A + R+ G +
Sbjct: 103 LNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQ 162
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T L + + +HS K G D +VG+ LI YS + +A VF+
Sbjct: 163 FVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNG 222
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD+V W A++S Y+++ D A +M G + + + TS A ++ L
Sbjct: 223 IVRKDAVVWTAMVSCYSEN-DCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVL 281
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK IHG +IK T VG L+ Y+KC DA F + +VI + MIS
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 341
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E A LF + V PN+ + ++ A + + G+ IH IK S+ V
Sbjct: 342 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFV 401
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ YA+ M S K+F L +SWN ++ G++Q+GL A+ F +
Sbjct: 402 GNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQM 461
Query: 353 P-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P T+ SVL A A S++H + H I K ++D ++G++L+D Y K G I ++
Sbjct: 462 PCTQVTYSSVLRA--CASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDA 519
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+VF E+ +W AIIS A HG + F M V + ITF+++L+VC
Sbjct: 520 LKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSST 579
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G+++ G LFDSM D+ I+PS +HY+C+V +LGR GRL +A + +G IP P V ++
Sbjct: 580 GLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRA 639
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL +C IH NV +G A+ ++++EP +YVL+SN+YA G + VA+LRK M++ GV
Sbjct: 640 LLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGV 699
Query: 592 RKEVGFSWADV-GDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
RK G SW ++ G+I H FS G HP I M E +LN K R
Sbjct: 700 RKVPGLSWVEIKGEI---HAFSVGSVDHPDMRVINAMLE-------WLNLKTSR 743
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 225/452 (49%), Gaps = 20/452 (4%)
Query: 39 DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG----LDSEVYV 94
D+ S A+ ++ GV D+ + L C+ G +H +V+ G LD ++
Sbjct: 43 DELTSLAILPSVPGV--DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLD--LFC 98
Query: 95 GNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-K 153
N L+ MY + G L ARR+FD MP ++ VS+ ++ + Q GD+ EA AL +R +
Sbjct: 99 ANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDF--EAAAALFRRLRWE 156
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G ++ T+ L +H + K+G+ + VG+ L+ YS C + DA
Sbjct: 157 GHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDA 216
Query: 214 NKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
VF + ++ + WT M+S E+A +F +MR+ G PN ++ A
Sbjct: 217 EHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCL 276
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
V G+ IHG IKT +EP V L+ MYA+ ++D+ F+ + ++I + +I
Sbjct: 277 PSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMI 336
Query: 329 SGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
S YAQ+ + A + F +++ S PN Y+ SVL A + L G++ H+H IK+G
Sbjct: 337 SRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQA--CTNMVQLDFGKQIHNHAIKIG 394
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+SD VG+AL+D Y K + S ++F+ ++ +E +W I+ ++ G E ++ F
Sbjct: 395 HESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFC 454
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMI-HKGR 478
EM+ + +T+ SVL C I H G+
Sbjct: 455 EMQAAQMPCTQVTYSSVLRACASTASIRHAGQ 486
>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 210/607 (34%), Positives = 333/607 (54%), Gaps = 46/607 (7%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTAL 64
CK GQ A+ I N+ ++ +I + + NL Y++ L
Sbjct: 36 CKLGQLTDAIRILNSTHSSEI-------------------SAKSNL---------YASLL 67
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR-LVEARRVFDEMPNKDS 123
C F+ GLQ H+ +VK GL+++ VGN+L+++Y + G + E RRVFD M KD+
Sbjct: 68 QTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFDGMFVKDA 127
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
+SW +++SGY ++ V+A+ +EM+ GL+ + + +SA AC + LG+ HG
Sbjct: 128 ISWTSMMSGYVASKEH-VKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRLGRCFHG 186
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----ED 238
V I G+ + + + L Y + DA +VF M + +VI WT ++S E+
Sbjct: 187 VVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEE 246
Query: 239 AVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLSEPSVCNC 295
A+ LF M R G+ P+ TF ++ A GNL +K+G+ IHG I S V +
Sbjct: 247 ALGLFYAMHRGKGLVPDGSTFGTVLTAC--GNLRRLKQGKEIHGKLITNGIGSNVVVESS 304
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNA 355
L+ MY + S++++ +VF+ + + I+SW+AL+ GY QNG A++ F + + +
Sbjct: 305 LLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFR---EMEEKDL 361
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
Y FG+VL A + L G+ H ++ G + IV SAL+D+YGK G I + RV+
Sbjct: 362 YCFGTVLKACAGLAAVRL--GKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVY 419
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
++ ++ W A++SALA++G E ++ F +M KG++PD I+F++VLT CG G++
Sbjct: 420 SKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVE 479
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
+GR+ F M K Y I+P +HYSCM+D+LGR G EEAE L+ + S+ LLG
Sbjct: 480 EGRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRNDASLWGVLLGP 539
Query: 536 CRIHGNV-EMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
C + + + ERIA +M++EP SYVL+SN+Y G +RK M +GV K
Sbjct: 540 CAANTDASSIAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALKIRKLMVRRGVAKT 599
Query: 595 VGFSWAD 601
VG SW D
Sbjct: 600 VGQSWID 606
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 195/579 (33%), Positives = 327/579 (56%), Gaps = 38/579 (6%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD-SEVYVGNALITMYSRWGRLVE 110
G+ + TY + L CL+ + LH+ +++ + ++ +GN L+++Y + G LVE
Sbjct: 59 GIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVE 118
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
ARRVFDEMP K+ VSW A+++ Y + ++G EA+ EM G++ +H +F S AC
Sbjct: 119 ARRVFDEMPVKNVVSWTAMIAAYARH-EHGQEALGFFYEMQDVGIQPNHFTFASILPAC- 176
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+LE+ + H +K G+ ++V VGN L+ Y+K A ++F +M R+V+SW
Sbjct: 177 --TDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNA 234
Query: 231 MISMNR-----EDAVSLFKEMRLDGV------------CPNDVTFIGLIHAISIGNLVKE 273
MI+ EDA+ LF+E+ V C + + L + NLV
Sbjct: 235 MIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSW 294
Query: 274 GRMIHGLC----IKTNF-----LSEPSVC--NCLITMYARFESMQDSEKVFDELSCREII 322
MI G +K F + E +V N +I+ +A+ ++++ K+F + ++
Sbjct: 295 NTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVV 354
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
SWNA+I+GY+QNG + A++ FG ++ + KPN TF VL A A L+ G H
Sbjct: 355 SWNAMIAGYSQNGQAENALK-LFGQMQMVDMKPNTETFAIVLPACAALA--VLEQGNEAH 411
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
+I+ G SD +VG+ L+ MY K GSI ++++VF+ +++ + +A+I A +G +
Sbjct: 412 EVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSK 471
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCM 500
+ F++M+ G++PD +TF+ VL+ C G++ +GR FD M + YHI P+ +HY CM
Sbjct: 472 ESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCM 531
Query: 501 VDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGS 560
+D+LGR G +EA +L+ ++P P + SLL ACR H N+++GE++A L+ + P
Sbjct: 532 IDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNP 591
Query: 561 GSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSW 599
YVL+SN+YA G W+ + +R MK + V+K++G SW
Sbjct: 592 APYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSW 630
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 143/545 (26%), Positives = 264/545 (48%), Gaps = 75/545 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+++Y K G +A +F+ + ++VSW +++ + E +AL F M +G+ +
Sbjct: 107 VSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNH 166
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ L C D E + G + H IVK G +S V+VGN L+ MY++ G + AR +FD+
Sbjct: 167 FTFASILPACTDLE--VLG-EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDK 223
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN-LE 176
MP +D VSWNA+++GY Q+G +E L L + + K + + + + CG +N +E
Sbjct: 224 MPQRDVVSWNAMIAGYVQNG--LIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVE 281
Query: 177 LGKQ----------------IHGVSIKMGYG-------THVSVGNVLMSTYSKCEVTGDA 213
L ++ + S+K + +V N ++S +++ +A
Sbjct: 282 LFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEA 341
Query: 214 NKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
K+F+ M + NV+SW MI S N E+A+ LF +M++ + PN TF ++ A +
Sbjct: 342 LKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAAL 401
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
++++G H + I++ F S+ V N L+ MYA+ S++D+ KVFD + ++ S +A+I
Sbjct: 402 AVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMI 461
Query: 329 SGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
GYA NG S +++ F + KP+ TF VL+A CH+ ++ G
Sbjct: 462 VGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSAC-------------CHAGLVDEG 508
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
I+ R ++ T + +I L R G ++ +
Sbjct: 509 RQYFDIM-----------------TRFYHITPAMEHYG--CMIDLLGRAGCFDEANDLIN 549
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
+M ++PD+ + S+L+ C + I G + ++ P+P Y + ++
Sbjct: 550 KMP---IKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAP--YVLLSNIYAAA 604
Query: 508 GRLEE 512
GR ++
Sbjct: 605 GRWDD 609
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 192/380 (50%), Gaps = 20/380 (5%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTA 63
Y ++G + AL +F + D+++WNT+++G+ + D + A+ + + V+++T
Sbjct: 239 YVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGD-VENAVELFEKMPEQNLVSWNTM 297
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
++ + + +L ++ + V NA+I+ +++ G++ EA ++F MP +
Sbjct: 298 IAGYVQNGSVKEAFKLFQIMP----ERNVISWNAVISGFAQNGQVEEALKLFKTMPECNV 353
Query: 124 VSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSWNA+++GY+Q+G E L L +M ++ + +F AC LE G + H
Sbjct: 354 VSWNAMIAGYSQNGQ--AENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAH 411
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN--RE 237
V I+ G+ + V VGN L+ Y+KC DA KVF RM ++ S + MI ++N +
Sbjct: 412 EVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSK 471
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV--CNC 295
+++ LF++M+ G+ P+ VTF+G++ A LV EGR + + ++ P++ C
Sbjct: 472 ESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHIT-PAMEHYGC 530
Query: 296 LITMYARFESMQDSEKVFDELSCR-EIISWNALISG-YAQNGLSLA-AVQAFFGVIKESK 352
+I + R ++ + +++ + + W +L+S N + L V +
Sbjct: 531 MIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQN 590
Query: 353 PNAYTFGS-VLNAVGAAEDI 371
P Y S + A G +DI
Sbjct: 591 PAPYVLLSNIYAAAGRWDDI 610
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 152/287 (52%), Gaps = 18/287 (6%)
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF-LSEPSVCNCL 296
+A+ + ++M +G+ P+ T+ L+ + + +++H I+T F + S+ N L
Sbjct: 47 EALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKL 106
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPN 354
+++Y + S+ ++ +VFDE+ + ++SW A+I+ YA++ A+ FF +++ +PN
Sbjct: 107 VSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEAL-GFFYEMQDVGIQPN 165
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
+TF S+L A E + H I+K G +S+ VG+ L+DMY KRG I ++ +
Sbjct: 166 HFTFASILPACTDLEVLG-----EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFAREL 220
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F++ ++ +W A+I+ ++G E + F+E+ + D IT+ +++ + G +
Sbjct: 221 FDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKR----DVITWNTMMAGYAQCGDV 276
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
LF+ M + + ++ M+ + G ++EA +L +P
Sbjct: 277 ENAVELFEKMPEQNLVS-----WNTMIAGYVQNGSVKEAFKLFQIMP 318
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 214/653 (32%), Positives = 329/653 (50%), Gaps = 21/653 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+NMY K G A +F+ + ++VS+ T++ + D A + R+ G +
Sbjct: 103 LNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQ 162
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T L + + +HS K G D +VG+ LI YS + +A VF+
Sbjct: 163 FVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNG 222
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD+V W A++S Y+++ D A +M G + + + TS A ++ L
Sbjct: 223 IVRKDAVVWTAMVSCYSEN-DCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVL 281
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK IHG +IK T VG L+ Y+KC DA F + +VI + MIS
Sbjct: 282 GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 341
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E A LF + V PN+ + ++ A + + G+ IH IK S+ V
Sbjct: 342 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFV 401
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ YA+ M S K+F L +SWN ++ G++Q+GL A+ F +
Sbjct: 402 GNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQM 461
Query: 353 P-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P T+ SVL A A S++H + H I K ++D ++G++L+D Y K G I ++
Sbjct: 462 PCTQVTYSSVLRA--CASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDA 519
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+VF E+ +W AIIS A HG + F M V + ITF+++L+VC
Sbjct: 520 LKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSST 579
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G+++ G LFDSM D+ I+PS +HY+C+V +LGR GRL +A + +G IP P V ++
Sbjct: 580 GLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRA 639
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL +C IH NV +G A+ ++++EP +YVL+SN+YA G + VA+LRK M++ GV
Sbjct: 640 LLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGV 699
Query: 592 RKEVGFSWADV-GDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
RK G SW ++ G+I H FS G HP I M E L L + RE
Sbjct: 700 RKVPGLSWVEIKGEI---HAFSVGSVDHPDMRVINAMLEWLN-----LKTSRE 744
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 225/452 (49%), Gaps = 20/452 (4%)
Query: 39 DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG----LDSEVYV 94
D+ S A+ ++ GV D+ + L C+ G +H +V+ G LD ++
Sbjct: 43 DELTSLAILPSVPGV--DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLD--LFC 98
Query: 95 GNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-K 153
N L+ MY + G L ARR+FD MP ++ VS+ ++ + Q GD+ EA AL +R +
Sbjct: 99 ANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDF--EAAAALFRRLRWE 156
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G ++ T+ L +H + K+G+ + VG+ L+ YS C + DA
Sbjct: 157 GHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDA 216
Query: 214 NKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
VF + ++ + WT M+S E+A +F +MR+ G PN ++ A
Sbjct: 217 EHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCL 276
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
V G+ IHG IKT +EP V L+ MYA+ ++D+ F+ + ++I + +I
Sbjct: 277 PSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMI 336
Query: 329 SGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
S YAQ+ + A + F +++ S PN Y+ SVL A + L G++ H+H IK+G
Sbjct: 337 SRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQA--CTNMVQLDFGKQIHNHAIKIG 394
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+SD VG+AL+D Y K + S ++F+ ++ +E +W I+ ++ G E ++ F
Sbjct: 395 HESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFC 454
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMI-HKGR 478
EM+ + +T+ SVL C I H G+
Sbjct: 455 EMQAAQMPCTQVTYSSVLRACASTASIRHAGQ 486
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 331/615 (53%), Gaps = 14/615 (2%)
Query: 31 VLSGFEKSDDALS-FALRMNLI--GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG 87
++ GF K D ++ F LI G D T + C D + G +H ++ KFG
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 88 LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
LD + +V AL+ MY + + +AR +FD+M +D V+W ++ GY + G E+++
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN-ESLVLF 119
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
+M +G+ D V+ + AC + + I + + V +G ++ Y+KC
Sbjct: 120 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 179
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLI 262
A ++F RM ++NVISW+ MI+ A+ LF+ M G+ P+ +T L+
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
+A S ++ GR+IH + K + VC L+ MY + ++D+ +FD++ R+++
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLV 299
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
+W +I GYA+ G + ++ F + +E P+ +V+ A A+ ++ +
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFA--CAKLGAMHKARTIDD 357
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
+I + D I+G+A++DM+ K G + ++ +F+ +EK+ +W+A+I+A HG
Sbjct: 358 YIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 417
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
++ F M G+ P+ IT +S+L C G++ +G F M +DY + HY+C+V
Sbjct: 418 ALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVV 477
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG 561
D+LGR GRL+EA +L+ + + + LGACR H +V + E+ A +L++++P G
Sbjct: 478 DLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPG 537
Query: 562 SYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRS 621
Y+L+SN+YA G WE VA R M + ++K G++W +V + H FS GD THPRS
Sbjct: 538 HYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKS--HQFSVGDTTHPRS 595
Query: 622 EEIYRMAECLGSEMK 636
+EIY M + LG++++
Sbjct: 596 KEIYEMLKSLGNKLE 610
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 221/449 (49%), Gaps = 14/449 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K + + A +F+ + D+V+W ++ G+ K++++L +M GVV D
Sbjct: 72 VDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDK 131
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V T + C + I + +V +G A+I MY++ G + AR +FD
Sbjct: 132 VAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDR 191
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ +SW+A+++ Y G G +A+ M+ G+ D ++ S AC KNL++
Sbjct: 192 MEEKNVISWSAMIAAYGYHGQ-GRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQM 250
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+ IH + K G V L+ Y KC DA +F +M +R++++WT MI
Sbjct: 251 GRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAE 310
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N +++ LF +MR +GV P+ V + ++ A + + + R I + F + +
Sbjct: 311 CGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVIL 370
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+I M+A+ ++ + ++FD + + +ISW+A+I+ Y +G A+ F +++
Sbjct: 371 GTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGI 430
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSIFE 410
PN T S+L A A + + G R S + + + +D + ++D+ G+ G + E
Sbjct: 431 LPNKITLVSLLYACSHAGLV--EEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDE 488
Query: 411 SQRVFNE-TQEKSEFAWTAIISALARHGD 438
+ ++ T EK E W A + A H D
Sbjct: 489 ALKLIESMTVEKDEGLWGAFLGACRTHKD 517
>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 578
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 317/538 (58%), Gaps = 11/538 (2%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
FG+QL+S+++K GLDS+ + N+ I+ Y++ A +VFD MP KD +SWN I++GY
Sbjct: 44 FGIQLYSIVLKSGLDSDFVICNSFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYF 103
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG-YGTH 193
Q+G Y + + EM G+ S S C +++LG+ IH + + G
Sbjct: 104 QNG-YFTQGFIMFKEMYECGIVPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKE 162
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRL 248
+ V L+ Y K + A +VF ++ +NV+SWT ++S ++ A+ F+ M++
Sbjct: 163 IFVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQI 222
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF-ESMQ 307
+GV PN VT I ++ A + K G+ IHG + F + + LI +Y R E +Q
Sbjct: 223 NGVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQ 282
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVG 366
++ F+ + ++++ W+++I Y ++ S+ A++ F + + ++PN+ T +V+ A
Sbjct: 283 LAKLTFERSNVKDVVMWSSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACT 342
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
SLK+G H +I+K GL+ D +G+AL++MY K G + S ++F E K +W
Sbjct: 343 TLT--SLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSW 400
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ +I+A HG + + F EM+ +GV PD++TFL+VL+ C +G++ +G+ +FD++ K
Sbjct: 401 STLITAYGLHGHGKEALCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKK 460
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
D + + +HY+C+VD+LG+ G++++A +++ +P P ++ SL+ AC+IHG +E+ E
Sbjct: 461 DGKVSLTVEHYACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAE 520
Query: 547 RIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
R+A L+K EP+ + ++ L+S +YAE G+W V +R+ M+ +G+ K GFS G+
Sbjct: 521 RLAQELIKSEPSNAANHTLLSMIYAESGNWFAVEDVRRLMRVQGLSKCYGFSQVSAGN 578
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 227/453 (50%), Gaps = 16/453 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG-FEKSDDALSFAL--RMNLIGVVFDA 57
++ Y KS + AL +F+ + D +SWN +++G F+ F + M G+V
Sbjct: 68 ISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKP 127
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ +S C+ G +H+L++ G + E++V +L+ Y + G + A RVFD
Sbjct: 128 ELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFD 187
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
++ K+ VSW A++SG + + DY + A+ M G+R + V+ + A +
Sbjct: 188 QIEVKNVVSWTALVSGCSANLDYNM-ALDCFRAMQINGVRPNRVTLIAILPAFAELGCAK 246
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC-EVTGDANKVFRRMHDRNVISWTTMI--- 232
GK+IHG + + G+ + L+ Y + E A F R + ++V+ W+++I
Sbjct: 247 TGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSY 306
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
S + +A+ LF+ MR DG PN VT + +I A + +K G HG +K +
Sbjct: 307 CRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDT 366
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
+ N LI MY++ + S ++F E+ ++ +SW+ LI+ Y +G A+ F + ++
Sbjct: 367 YIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQ 426
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA-LLDMYGKRGSI 408
+P+A TF +VL+A + + K GQ+ ++ K G S + A L+D+ GK G +
Sbjct: 427 GVEPDAMTFLAVLSACNHSGLV--KEGQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKV 484
Query: 409 FESQRVFNETQEK-SEFAWTAIISALARHGDYE 440
++ + K S W++++SA HG E
Sbjct: 485 DDAFDILRAMPMKPSTTIWSSLVSACKIHGRLE 517
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 195/649 (30%), Positives = 355/649 (54%), Gaps = 19/649 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY + G D AL +F+ + + ++V+W +++S F + DA+ +M L GV D
Sbjct: 57 IQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDR 116
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T+++ L E L G ++HS I++ G + + V N ++ MY + G + +A VFD
Sbjct: 117 ITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFD 176
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ + + SW I++ Y Q+G + +E + L M + G++ D +FT+ AC LE
Sbjct: 177 SIQDPNVFSWTIIIAAYAQNG-HCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALE 235
Query: 177 LGKQIHGVSIK-MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
K +H +I G +VG L++ Y KC +A VF ++ +++++SW++MI
Sbjct: 236 EAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAF 295
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
S + A+ L M L+GV PN+VTF+ ++ A++ + G+ IH ++ + +
Sbjct: 296 AQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDV 355
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
+ + L+ MY + ++ + +F+ R+++SW+++I+GY+QN A+ F + +
Sbjct: 356 CLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVD 415
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+PN+ TF S ++A +L+ G + H + +GLD D V +AL+++YGK G +
Sbjct: 416 GVQPNSVTFVSAIDACAGVG--ALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLE 473
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E++ VF ++K+ WT+I A ++G + ME +G++PD I F+++L C
Sbjct: 474 EAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCN 533
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G + KG H ++ M +D+ I P+ +H CMVD+LGR G+LE AE+L+ + L+ +
Sbjct: 534 YAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWM 593
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
LL AC+ H + R A+ + ++EP + YVL+S+++ G WE R+ M +
Sbjct: 594 M-LLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGR 652
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRS--EEIYRMAECLGSEMK 636
GV++ +G S ++G D +H F + + P EI+ E LG EM+
Sbjct: 653 GVQRLLGRSSIEIG--DRVHEFVAASDVLPHHLVGEIFAALEKLGREMQ 699
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 253/464 (54%), Gaps = 17/464 (3%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGL-----DSEVYVGNALITMYSRWGRLVEARRVFDEM 118
L+ C D G ++H L+++ L E + N +I MY R G A VFD M
Sbjct: 17 LTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDRM 76
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA-ASACGHEKNLEL 177
+++ V+W +++S +T G +G +A++ +M+ G+ D ++FTS G E+NL+
Sbjct: 77 KDQNVVAWTSLISAFTFAGHFG-DAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDE 135
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GK++H ++ GY V N+++ Y KC A VF + D NV SWT +I+ +
Sbjct: 136 GKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQ 195
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS-EPS 291
+ + L M GV P+ TF ++ A + ++E +++H I + L + +
Sbjct: 196 NGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAA 255
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V LI +Y + +++++ VF ++ ++I+SW+++I+ +AQ+G + +A+Q + E
Sbjct: 256 VGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEG 315
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+PN TF +VL AV + + + ++G+ H+ I++ G D + SAL+ MY G +
Sbjct: 316 VRPNNVTFVNVLEAVTSLK--AFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVET 373
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F ++E+ +W+++I+ +++ ++ F+EME GV+P+S+TF+S + C
Sbjct: 374 ARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAG 433
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
G + +G L + ++ ++ + +V++ G+ GRLEEAE
Sbjct: 434 VGALRRGTQLHER-VRCLGLDKDVPVATALVNLYGKCGRLEEAE 476
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 137/267 (51%), Gaps = 7/267 (2%)
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLS-----EPSVCNCLITMYARFESMQDSEKVFD 314
++ A S + EG+ +HGL ++ + L E + N +I MY R + VFD
Sbjct: 15 AILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFD 74
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISL 373
+ + +++W +LIS + G A+ F ++ P+ TF S+L E +L
Sbjct: 75 RMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRER-NL 133
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
G+R HSHI++ G + D +V + +++MYGK G + ++ VF+ Q+ + F+WT II+A
Sbjct: 134 DEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
A++G V+ M GV+PD TF +VL C G + + + L + + ++
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRD 253
Query: 494 PDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ ++++ G+ G LEEA + QI
Sbjct: 254 AAVGTALINLYGKCGALEEAFGVFVQI 280
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 209/635 (32%), Positives = 340/635 (53%), Gaps = 85/635 (13%)
Query: 79 LHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN----------------- 120
+H L+++ YV N L+T Y+R GRL ARR+FD MP+
Sbjct: 31 VHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHAR 90
Query: 121 --------------KDSVSWNAILSGYTQDGDYGVEAIL--------ALIEMMR-KGLRL 157
+D+VS+NA+++G++ G A A+++ R + R+
Sbjct: 91 LLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRI 150
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
AASA G + LG+Q+H +++G+G + + L+ Y+K + GDA +VF
Sbjct: 151 TMSGMVMAASALG---DRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVF 207
Query: 218 -------------------------------RRMHDRNVISWTTMIS---MN--REDAVS 241
M DR+ I+WTTM++ N + +A+
Sbjct: 208 DEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALD 267
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
+F+ MR +GV + TF ++ A +EG+ IH I+T + V + L+ MY+
Sbjct: 268 VFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYS 327
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
+ S++ +E VF ++C+ IISW A+I GY QNG AV+ F + + KPN +T GS
Sbjct: 328 KCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGS 387
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
V+++ A SL+ G + H + GL V SAL+ +YGK GSI ++ R+F+E
Sbjct: 388 VISS--CANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPF 445
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+ ++TA++S A+ G + ++ F++M KGV+P+ +TF+ VL+ C R+G++ KG
Sbjct: 446 HDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSY 505
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
F SM +D+ I DHY+CM+D+ R GRL+EAEE + Q+P P +LL ACR+ G
Sbjct: 506 FHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRG 565
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
++E+G+ A+ L+K +P SYVL+ +++A KG+W VA+LR+GM+ + V+KE G SW
Sbjct: 566 DMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSW- 624
Query: 601 DVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
+ + +H FS+ D +HP S IY + L S+M
Sbjct: 625 -IKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKM 658
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 231/487 (47%), Gaps = 78/487 (16%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS--------------------DDALSFALRMNLIGVVF 55
+F ++ D VS+N +++GF + D A R+ + G+V
Sbjct: 98 LFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVM 157
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
A +AL G Q+H I++ G + + + L+ MY++ G + +A+RVF
Sbjct: 158 AA----SALG------DRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVF 207
Query: 116 DE-------------------------------MPNKDSVSWNAILSGYTQDGDYGVEAI 144
DE M ++DS++W +++G TQ+G EA+
Sbjct: 208 DEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNG-LQSEAL 266
Query: 145 LALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTY 204
M +G+ +D +F S +ACG E GKQIH +I+ Y ++ VG+ L+ Y
Sbjct: 267 DVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMY 326
Query: 205 SKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFI 259
SKC A VFRRM +N+ISWT MI + E+AV +F EM+ DG+ PND T
Sbjct: 327 SKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLG 386
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
+I + + ++EG H + + + +V + L+T+Y + S++D+ ++FDE+
Sbjct: 387 SVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFH 446
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTFGSVLNAVGAA----EDISLK 374
+ +S+ AL+SGYAQ G + + F ++K KPN TF VL+A + + S
Sbjct: 447 DQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYF 506
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISAL 433
H + H I V LD + ++D+Y + G + E++ + + W ++SA
Sbjct: 507 HSMQ-QDHGI-VLLDDH---YTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSAC 561
Query: 434 ARHGDYE 440
GD E
Sbjct: 562 RLRGDME 568
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 181/344 (52%), Gaps = 25/344 (7%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
+ CK ++A +F + + D ++W T+++G ++ +AL RM GV D T
Sbjct: 226 LRCK--MVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYT 283
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ + L+ C G Q+H+ ++ D ++VG+AL+ MYS+ + A VF M
Sbjct: 284 FGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMT 343
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
K+ +SW A++ GY Q+G G EA+ EM G++ + + S S+C + +LE G
Sbjct: 344 CKNIISWTAMIVGYGQNG-CGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGA 402
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----M 234
Q H +++ G +++V + L++ Y KC DA+++F M + +S+T ++S
Sbjct: 403 QFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFG 462
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-------RMIHGLCIKTNFL 287
++ + LF++M L GV PN VTFIG++ A S LV++G + HG+ + +
Sbjct: 463 KAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHY 522
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISG 330
+ C+I +Y+R ++++E+ ++ C + I W L+S
Sbjct: 523 T------CMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSA 560
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 18/247 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K A +F + +I+SW ++ G+ ++ ++A+ M G+ +
Sbjct: 323 VDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPND 382
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + +S C + G Q H + + GL + V +AL+T+Y + G + +A R+FDE
Sbjct: 383 FTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDE 442
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D VS+ A++SGY Q G E I +M+ KG++ + V+F SAC +E
Sbjct: 443 MPFHDQVSYTALVSGYAQFGK-AKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEK 501
Query: 178 G-------KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWT 229
G +Q HG+ + + T ++ YS+ +A + R+M + I W
Sbjct: 502 GCSYFHSMQQDHGIVLLDDHYT------CMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWA 555
Query: 230 TMISMNR 236
T++S R
Sbjct: 556 TLLSACR 562
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/621 (30%), Positives = 332/621 (53%), Gaps = 15/621 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAV---TY 60
Y G+ D A + L VSWN +L+G+ + D + + + D + T
Sbjct: 196 YTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTL 255
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
T L C++ +G +H+ ++K GL+++ + + L+ MYSR EA VF +
Sbjct: 256 PTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDE 315
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
D V +A++S + + D EA+ ++M G++ +H F A + L +
Sbjct: 316 PDVVHCSAMISCFDRH-DMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRS 374
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----N 235
+H +K G+ VG+ +++ Y K DA F +H+ + SW T++S N
Sbjct: 375 VHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSN 434
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
E + +FK+M +G N T++ ++ + ++ G +H +K+ ++ V
Sbjct: 435 CEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRM 494
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
L+ MYA+ + VF++L R+ SW ++SGYA+ + V+ F +++E+ +P+
Sbjct: 495 LVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPS 554
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
T L+ ++ SL G + HS IK G +S +V AL+DMY K G+I +++ +
Sbjct: 555 DATLAVSLSV--CSDMASLGSGLQLHSWAIKSGWNSS-VVSGALVDMYVKCGNIADAEML 611
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F+E++ + + AW II ++HG ++ FK+M ++G RPD ITF+ VL+ C G++
Sbjct: 612 FHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLL 671
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
++GR F S+ Y I P+ +HY+CMVD+L + GRL EAE L+ Q+P P S+ +++LG
Sbjct: 672 NEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILG 731
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
ACRIH N+E+ ER A+ L ++EP + S +L+SN+YA+ G W V +R + GV+KE
Sbjct: 732 ACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKE 791
Query: 595 VGFSWADVGDIDGLHGFSSGD 615
G SW ++ +H F S D
Sbjct: 792 PGCSWIEIN--GQIHMFLSQD 810
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 255/527 (48%), Gaps = 18/527 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMYCK G+ A +F+ + + DIV+W ++S SD AL RMN G+ +
Sbjct: 92 LNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNG 151
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKF-GLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T ++ L C F Q+H +VK GLD + YVG++L+ Y+ G L A V
Sbjct: 152 FTLASVLKACSGGSHSKFTHQVHGQVVKLNGLD-DPYVGSSLVEAYTSCGELDAAETVLL 210
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIE-MMRKGLRLDHVSFTSAASACGHEKNL 175
+P + VSWNA+L+GY + GDY ++ +IE ++ G + + + C
Sbjct: 211 GLPERSDVSWNALLNGYARHGDY--RRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLA 268
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-M 234
+ G+ +H IK G T + + L+ YS+C +A +VF R+ + +V+ + MIS
Sbjct: 269 KYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCF 328
Query: 235 NRED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+R D A+ LF +M GV PN F+G+ S R +H +K+ F
Sbjct: 329 DRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLK 388
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + ++ MY + ++QD+ FD + + SWN ++S + ++ F + E
Sbjct: 389 GVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACE 448
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
N YT+ SVL + ++L+ G + H+ I+K GL +D V L+DMY + G
Sbjct: 449 GFSANKYTYVSVLRCCTSL--MNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFT 506
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ VF + +E+ F+WT I+S A+ + E V+ F+ M + +RP T L+VC
Sbjct: 507 SACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCS 566
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ G L +K S +VDM + G + +AE L
Sbjct: 567 DMASLGSGLQLHSWAIKSGW--NSSVVSGALVDMYVKCGNIADAEML 611
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 229/476 (48%), Gaps = 16/476 (3%)
Query: 47 RMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWG 106
R++ + + ++ AL C G +LH+ +++ L + ++ ++L+ MY + G
Sbjct: 40 RLHTVAHAEELRLHAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCG 99
Query: 107 RLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA 166
RLV+ARRVFD MP++D V+W A++S +T GD +A+ M ++G+ + + S
Sbjct: 100 RLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSD-QALDMFARMNQEGIAPNGFTLASVL 158
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
AC + + Q+HG +K+ VG+ L+ Y+ C A V + +R+ +
Sbjct: 159 KACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDV 218
Query: 227 SWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
SW +++ + + + +++ G + T ++ L K G+ +H
Sbjct: 219 SWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASV 278
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IK ++ + +CL+ MY+R S +++ +VF + +++ +A+IS + ++ ++ A+
Sbjct: 279 IKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEAL 338
Query: 342 QAFFGVIKES----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
F +K S KPN Y F + D +L + H++I+K G VG A
Sbjct: 339 DLF---VKMSGMGVKPNHYIFVGIAGVASRTGDANL--CRSVHAYIVKSGFAMLKGVGDA 393
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
+L+MY K G++ ++ F+ E F+W I+SA + E + FK+M +G +
Sbjct: 394 ILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSAN 453
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
T++SVL C + G + +LK ++ D +VDM + G A
Sbjct: 454 KYTYVSVLRCCTSLMNLRFGTQVHACILKS-GLQNDTDVSRMLVDMYAQSGCFTSA 508
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 14/229 (6%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
+L+ GQ H+ +++ L D + +LL+MY K G + +++RVF+ + AWTA+IS
Sbjct: 65 TLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMIS 124
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A GD + ++ F M +G+ P+ T SVL C G K H + +
Sbjct: 125 AHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACS-GGSHSKFTHQVHGQVVKLNGL 183
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
P S +V+ G L+ AE ++ +P +S +LL HG+ R+
Sbjct: 184 DDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVS-WNALLNGYARHGDY---RRVMII 239
Query: 552 LMKMEPAGS--GSYVLMSNL-------YAEKGDWEMVAILRKGMKSKGV 591
+ K+ +G Y L + L A+ G +++++G+++ V
Sbjct: 240 IEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNV 288
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G A +F+ D V+WNT++ G+ + AL +M G D
Sbjct: 596 VDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDG 655
Query: 58 VTYSTALSFCLDHEGFLFGLQ--LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T+ LS C H G L + SL +G+ + ++ + S+ GRLVEA +
Sbjct: 656 ITFVGVLSAC-SHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLI 714
Query: 116 DEMP-NKDSVSWNAIL 130
++MP DS W IL
Sbjct: 715 NQMPLAPDSSIWRTIL 730
>gi|357129835|ref|XP_003566566.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Brachypodium distachyon]
Length = 614
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 204/570 (35%), Positives = 306/570 (53%), Gaps = 21/570 (3%)
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVK-----------FGLDSEVYVGNALI 99
+ + D S LS C G LH IVK L + NAL+
Sbjct: 3 VPALLDYAYLSGLLSRCGRAADHRLGAALHVTIVKNPSHFLLCPLRPSLRHVLVAWNALV 62
Query: 100 TMYSRWGRLVEARRVFDEMPNKDSVSWNAIL-SGYTQDGDYGVEAILALIEMMRKGLRLD 158
+MY+R GR EA RVFDEM +DSVSWN+++ S +D +L G+ D
Sbjct: 63 SMYARCGRHAEAARVFDEMRIRDSVSWNSLIGSSGAEDALSQFRRMLRSSSSPGGGVSCD 122
Query: 159 HVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR 218
H +FT+ SAC E +L +HG+ + G+ VSVGN L++ Y +CE G A + F
Sbjct: 123 HATFTTVLSACAREASLPTCAMVHGLVVSRGFEAEVSVGNALVTAYFECESPGSAERAFH 182
Query: 219 RMHDRNVISWTTMIS-MNRE----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE 273
M +RNVI+WT MIS M RE D++ LF++MR V N T+ + A + +KE
Sbjct: 183 GMAERNVITWTAMISGMAREELYKDSIVLFQQMR-RTVDANSATYSSSLLACAGSLALKE 241
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
G+ IHGL +K ++ V + L+ +Y++ M+D+ VF + IS ++ G+AQ
Sbjct: 242 GQQIHGLVVKAGLETDLHVESGLMDLYSKCGLMEDTLSVFRLCRQPDEISLTVILVGFAQ 301
Query: 334 NGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
NGL A + F + E + +VL A GA+ +L G++ H+ +IK +
Sbjct: 302 NGLEEKAFELFAEMAGEGILIDTNMVSAVLGAFGASAPFAL--GKQIHALVIKKCFGRNI 359
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
V + L++MY K G + ES +VFNET K+ +W +II+A ARHG V F+ M+
Sbjct: 360 YVCNGLINMYSKCGELEESIQVFNETPSKNSISWNSIIAAFARHGQGSEVFKLFESMKAD 419
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
G P +TFLS+L C G KG + +SM +Y I P +HY+C+VDMLGR G LE+
Sbjct: 420 GANPTDVTFLSLLHGCSHVGSAKKGLEILNSMSSEYGILPRVEHYACVVDMLGRAGLLED 479
Query: 513 AEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAE 572
A + P + Q+L+GAC GN E+G+ A+ L+ ++P +YVL+SN+Y+
Sbjct: 480 ARSFIEDGPFKDSALLWQALMGACSFRGNSEIGKYAAEKLLHLDPDSPAAYVLLSNIYSS 539
Query: 573 KGDWEMVAILRKGMKSKGVRKEVGFSWADV 602
+G W+ A + K M+ G+RK+ G SW ++
Sbjct: 540 EGRWDDRARVMKSMREMGLRKDTGKSWIEL 569
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 226/455 (49%), Gaps = 21/455 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRM------NLIGVV 54
++MY + G+ +A +F+ + D VSWN+++ G ++DALS RM GV
Sbjct: 62 VSMYARCGRHAEAARVFDEMRIRDSVSWNSLI-GSSGAEDALSQFRRMLRSSSSPGGGVS 120
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D T++T LS C +H L+V G ++EV VGNAL+T Y A R
Sbjct: 121 CDHATFTTVLSACAREASLPTCAMVHGLVVSRGFEAEVSVGNALVTAYFECESPGSAERA 180
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F M ++ ++W A++SG ++ Y + + L + MR+ + + +++S+ AC
Sbjct: 181 FHGMAERNVITWTAMISGMAREELY--KDSIVLFQQMRRTVDANSATYSSSLLACAGSLA 238
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L+ G+QIHG+ +K G T + V + LM YSKC + D VFR + IS T ++
Sbjct: 239 LKEGQQIHGLVVKAGLETDLHVESGLMDLYSKCGLMEDTLSVFRLCRQPDEISLTVILVG 298
Query: 233 -SMN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ N E A LF EM +G+ + ++ A G+ IH L IK F
Sbjct: 299 FAQNGLEEKAFELFAEMAGEGILIDTNMVSAVLGAFGASAPFALGKQIHALVIKKCFGRN 358
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
VCN LI MY++ +++S +VF+E + ISWN++I+ +A++G + F +
Sbjct: 359 IYVCNGLINMYSKCGELEESIQVFNETPSKNSISWNSIIAAFARHGQGSEVFKLFESMKA 418
Query: 350 E-SKPNAYTFGSVLNAVGAAEDISLKHG-QRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ + P TF S+L+ G + S K G + +S + G+ + ++DM G+ G
Sbjct: 419 DGANPTDVTFLSLLH--GCSHVGSAKKGLEILNSMSSEYGILPRVEHYACVVDMLGRAG- 475
Query: 408 IFESQRVFNETQ--EKSEFAWTAIISALARHGDYE 440
+ E R F E + S W A++ A + G+ E
Sbjct: 476 LLEDARSFIEDGPFKDSALLWQALMGACSFRGNSE 510
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMY K G+ ++++ +FN + + +SWN++++ F + + M G
Sbjct: 366 INMYSKCGELEESIQVFNETPSKNSISWNSIIAAFARHGQGSEVFKLFESMKADGANPTD 425
Query: 58 VTYSTALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT+ + L C GL+ L+S+ ++G+ V ++ M R G L +AR +
Sbjct: 426 VTFLSLLHGCSHVGSAKKGLEILNSMSSEYGILPRVEHYACVVDMLGRAGLLEDARSFIE 485
Query: 117 EMPNKDS-VSWNAILS-----GYTQDGDYGVEAILAL 147
+ P KDS + W A++ G ++ G Y E +L L
Sbjct: 486 DGPFKDSALLWQALMGACSFRGNSEIGKYAAEKLLHL 522
>gi|297604972|ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa Japonica Group]
Length = 704
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 218/661 (32%), Positives = 339/661 (51%), Gaps = 39/661 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD-----ALSFALRMN------ 49
+ +S + A +F+ + D V++ T+L+G + D AL LR +
Sbjct: 8 LKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPLAP 67
Query: 50 ----LIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW 105
++ +VF + + F L H LH+ V+ S V+V AL +Y++
Sbjct: 68 ADPFVLSLVFKSCAAAADARF-LPHAA-----SLHAFAVRSSAVSSVFVATALADVYAKA 121
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
G L A +VFDEMP+K+ VSW +++ T+ G EA+ EM G+ D ++ +A
Sbjct: 122 GCLGLALKVFDEMPHKNVVSWTTLVASLTRAGRRH-EALRRFSEMRASGVHCDSYAYAAA 180
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
+AC L G+++H K+G + V N L + Y++C A RM R+V
Sbjct: 181 LTACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDV 240
Query: 226 ISWTTMISM-----NREDAVSLFKEMRLD----GVCPNDVTFIGLIHAISIGNLVKEGRM 276
+WTT+IS ++A+ F M + PN+ T+ +I A + V G
Sbjct: 241 AAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQ 300
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFES-MQDSEKVFDELSCREIISWNALISGYAQNG 335
+H + F SV N L+T+Y R + ++ VF E ++++SW+A+ISGYAQ G
Sbjct: 301 LHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEG 360
Query: 336 LSLAAVQAFFGVIKES---KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
L+ A F + S +PN +T S+L+ A SL G++ H+ + GL+
Sbjct: 361 LAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAA--SLDAGRQLHTLAVAAGLEHHA 418
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
++ SAL+DMYGK GS+ ++ VF+ + +WTA+I A HG + + F+EM +
Sbjct: 419 MIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHV 478
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
G++PD +TF+ VL C G + G + M + Y + P+ +HY C+VD+LGR GR+ E
Sbjct: 479 GLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINE 538
Query: 513 AEELVGQIPGGPGLSVL-QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
AEEL+G+I V+ SLL AC G E G++ A+ M+ EP G+G++V M+NLYA
Sbjct: 539 AEELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYA 598
Query: 572 EKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHG-FSSGDNTHPRSEEIYRMAEC 630
KG W A R MK KGV K G+S VG G F + D THP+ IYRM E
Sbjct: 599 SKGQWHEAAQERHMMKQKGVVKGAGWSSITVGGEGRRVGVFVASDRTHPQDSAIYRMLEL 658
Query: 631 L 631
+
Sbjct: 659 I 659
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 209/437 (47%), Gaps = 23/437 (5%)
Query: 97 ALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY-GVEAILALIEMMRKGL 155
A + +R RL +A R+FD MP +D V++ +L+G+ GD+ G A+ + + L
Sbjct: 6 ARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPL 65
Query: 156 R-----LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
+ + F S A+A + L +H +++ + V V L Y+K
Sbjct: 66 APADPFVLSLVFKSCAAA-ADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCL 124
Query: 211 GDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAI 265
G A KVF M +NV+SWTT+++ R +A+ F EMR GV + + + A
Sbjct: 125 GLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTAC 184
Query: 266 SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWN 325
+ L+ GR +H C K S P V N L T+YAR + + + R++ +W
Sbjct: 185 ADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWT 244
Query: 326 ALISGYAQNGLSLAAVQAFFGVIKE-----SKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
+IS Y Q G + A++AF +++E + PN YT+ +V+ A + L G++ H
Sbjct: 245 TVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCL--GEQLH 302
Query: 381 SHIIKVGLDSDPIVGSALLDMYGK-RGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
+ + G V ++L+ +Y + G + + VF E+ K +W+AIIS A+ G
Sbjct: 303 AQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLA 362
Query: 440 ESVMNQFKEMENKG--VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
E F+EM + RP+ T S+L+VC + GR L ++ +E
Sbjct: 363 EDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLH-TLAVAAGLEHHAMIR 421
Query: 498 SCMVDMLGRVGRLEEAE 514
S ++DM G+ G + +A+
Sbjct: 422 SALIDMYGKSGSMLDAD 438
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 205/610 (33%), Positives = 313/610 (51%), Gaps = 74/610 (12%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
ALI+ + ++GR+ E+ F+ P ++ VSW A +SGY Q+G + VEA+ I+++ +
Sbjct: 122 TALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGYVQNG-FSVEAMKLFIKLLESEV 180
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST------------ 203
+ + V+FTS AC + + LG + G+ +K GY ++V N L++
Sbjct: 181 KPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLARE 240
Query: 204 -------------------YSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDA 239
Y + + G+A ++F M RN +SW+ MI S E++
Sbjct: 241 VFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEES 300
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ LF M +G PN F ++ A++ ++ G IHG K F + V + LI M
Sbjct: 301 LRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDM 360
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNG-----------------LSLAAVQ 342
Y + +D +FD + + ++SWNA++ GY+ NG +S +A+
Sbjct: 361 YCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAII 420
Query: 343 A----------FFGVIKE-----SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
A F V E PN TF S+L A A SL G+ H I+K+G
Sbjct: 421 AGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCA--CASTASLDKGKNLHGKIVKLG 478
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+ D VG+AL DMY K G I S++VFN +K+E +WTA+I LA G E + F+
Sbjct: 479 IQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFE 538
Query: 448 EME-NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
EME + P+ + FL+VL C +G++ KG F+SM Y ++P H++C+VDML R
Sbjct: 539 EMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSR 598
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLM 566
GRL EAEE + +P P + +LL C+ + N E+ ER+A L +M YVL+
Sbjct: 599 AGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLL 658
Query: 567 SNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
SN+YA G W V +RK MK+KG++K G SW ++ D +H F S D H +S EIY
Sbjct: 659 SNIYASAGRWRDVLKVRKLMKAKGLKKSGGCSWVEIR--DRVHSFYSEDGAHSQSAEIYE 716
Query: 627 MAECLGSEMK 636
+ E LG EMK
Sbjct: 717 ILELLGYEMK 726
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/551 (24%), Positives = 235/551 (42%), Gaps = 130/551 (23%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---------------------------- 37
+ G D+A +F+ + + +SW ++SGF K
Sbjct: 99 QRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISG 158
Query: 38 ------SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSE 91
S +A+ +++ V + VT+++ + C + F G+ + LIVK G + +
Sbjct: 159 YVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHD 218
Query: 92 VYVGNALITMYSRWG-------------------------------RLVEARRVFDEMPN 120
+ V N+LIT+ R G L EARR+FDEMP
Sbjct: 219 LAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQ 278
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
++ VSW+A+++ Y Q G Y E++ M+++G + + F+S SA + L+ G
Sbjct: 279 RNEVSWSAMIARYCQSG-YPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMN 337
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN-- 235
IHG K+G+ V V + L+ Y KC T D +F + ++N++SW M+ S+N
Sbjct: 338 IHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGH 397
Query: 236 -------------------------------REDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
++ +F EM L G PN TF L+ A
Sbjct: 398 MEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCA 457
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+ + +G+ +HG +K + V L MYA+ ++ S+KVF+ + + +SW
Sbjct: 458 CASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSW 517
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
A+I G A++GL+ ++ F + K S PN F +VL A HS
Sbjct: 518 TAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACS-------------HSG 564
Query: 383 IIKVGL----DSDPIVG--------SALLDMYGKRGSIFESQR-VFNETQEKSEFAWTAI 429
++ GL + + G + ++DM + G +FE++ +++ + AW A+
Sbjct: 565 LVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAAL 624
Query: 430 ISALARHGDYE 440
+S + + E
Sbjct: 625 LSGCKTYKNEE 635
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 179/377 (47%), Gaps = 53/377 (14%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y + + +A IF+ + + VSW+ +++ + +S +++L RM G +
Sbjct: 257 LDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNI 316
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+S+ LS E G+ +H + K G + +V+V ++LI MY + G + R +FD
Sbjct: 317 SCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDT 376
Query: 118 MPNKDSVSWNAILSGYTQDG----------------DYGVEAILA--------------L 147
+ K+ VSWNA++ GY+ +G + AI+A
Sbjct: 377 ILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVF 436
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
EM+ G + +F+S AC +L+ GK +HG +K+G VG L Y+K
Sbjct: 437 NEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKS 496
Query: 208 EVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEM-RLDGVCPNDVTFIGL 261
+ KVF RM +N +SWT MI S E++++LF+EM + + PN+V F+ +
Sbjct: 497 GDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAV 556
Query: 262 IHAISIGNLVKEG-------RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
+ A S LV +G ++GL K + C++ M +R + ++E+
Sbjct: 557 LFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFT------CVVDMLSRAGRLFEAEEFIY 610
Query: 315 ELSCR-EIISWNALISG 330
+ + E +W AL+SG
Sbjct: 611 SMPFQPETNAWAALLSG 627
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/486 (20%), Positives = 177/486 (36%), Gaps = 173/486 (35%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC----------------------- 293
T + L+ ++ L+++G +H KT SE +
Sbjct: 23 TCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDF 82
Query: 294 --------NCLITMYARFESMQDSEKVFDELS-------------------CRE------ 320
NC+I+ + ++ ++ K+FDE+ RE
Sbjct: 83 DGFDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFE 142
Query: 321 ------IISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISL 373
++SW A ISGY QNG S+ A++ F +++ E KPN TF SV+ A D L
Sbjct: 143 RNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGL 202
Query: 374 KHGQRCHSHIIKVGLDSDPIVG-------------------------------SALLDMY 402
G I+K G + D V +A+LD+Y
Sbjct: 203 --GMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLY 260
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
+ + E++R+F+E +++E +W+A+I+ + G E + F M +G +P+ F
Sbjct: 261 VEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFS 320
Query: 463 SVLTVCG-----------------------------------RNGMIHKGRHLFDSMLKD 487
S+L+ + G GR LFD++L+
Sbjct: 321 SILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEK 380
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP-----------GG------------- 523
+ ++ MV G +EEA+ L +P G
Sbjct: 381 NMVS-----WNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEV 435
Query: 524 ----------PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYV--LMSNLYA 571
P S SLL AC +++ G+ + ++K+ +YV ++++YA
Sbjct: 436 FNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKL-GIQCDTYVGTALTDMYA 494
Query: 572 EKGDWE 577
+ GD E
Sbjct: 495 KSGDIE 500
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/543 (33%), Positives = 312/543 (57%), Gaps = 23/543 (4%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKG 154
N LI MY + + A +VFD MP ++ VSW+A++SG+ +GD ++ L+L EM R+G
Sbjct: 416 NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGD--LKGSLSLFSEMGRQG 473
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
+ + +F++ ACG LE G QIHG +K+G+ V VGN L+ YSKC +A
Sbjct: 474 IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAE 533
Query: 215 KVFRRMHDRNVISWTTMIS--------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
KVFRR+ DR++ISW MI+ D + +E + P++ T L+ A S
Sbjct: 534 KVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKER-PDEFTLTSLLKACS 592
Query: 267 IGNLVKEGRMIHGLCIKTNF--LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
++ G+ IHG +++ F S ++ L+ +Y + + + K FD++ + +ISW
Sbjct: 593 STGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISW 652
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGAAEDISL-KHGQRCHS 381
++LI GYAQ G + A+ F ++E S+ +++ S+ +G D +L + G++ +
Sbjct: 653 SSLILGYAQEGEFVEAM-GLFKRLQELNSQIDSFALSSI---IGVFADFALLRQGKQMQA 708
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
+K+ + V ++++DMY K G + E+++ F E Q K +WT +I+ +HG +
Sbjct: 709 LAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKK 768
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+ F EM + PD + +L+VL+ C +GMI +G LF +L+ + I+P +HY+C+V
Sbjct: 769 SVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVV 828
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG 561
D+LGR GRL+EA+ L+ +P P + + Q+LL CR+HG++E+G+ + L++++
Sbjct: 829 DLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPA 888
Query: 562 SYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRS 621
+YV+MSNLY + G W R+ KG++KE G SW ++ +H F SG+++HP +
Sbjct: 889 NYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIE--REVHFFRSGEDSHPLT 946
Query: 622 EEI 624
I
Sbjct: 947 PVI 949
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 235/455 (51%), Gaps = 18/455 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MYCK + A +F+++ ++VSW+ ++SG + D +LS M G+ +
Sbjct: 419 IDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNE 478
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ST L C GLQ+H +K G + V VGN+L+ MYS+ GR+ EA +VF
Sbjct: 479 FTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRR 538
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL--RLDHVSFTSAASACGHEKNL 175
+ ++ +SWNA+++G+ G YG +A+ M + R D + TS AC +
Sbjct: 539 IVDRSLISWNAMIAGFVHAG-YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 597
Query: 176 ELGKQIHGVSIKMGY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
GKQIHG ++ G+ + ++ L+ Y KC A K F ++ ++ +ISW+++I
Sbjct: 598 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 657
Query: 234 MNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ +A+ LFK ++ + +I + L+++G+ + L +K
Sbjct: 658 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 717
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
E SV N ++ MY + + ++EK F E+ +++ISW +I+GY ++GL +V+ F+ ++
Sbjct: 718 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 777
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRG 406
+ + +P+ + +VL+A + I K G+ S +++ G+ + ++D+ G+ G
Sbjct: 778 RHNIEPDEVCYLAVLSACSHSGMI--KEGEELFSKLLETHGIKPRVEHYACVVDLLGRAG 835
Query: 407 SIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ E++ + + K W ++S HGD E
Sbjct: 836 RLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIE 870
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
I + L+DMY K + +VF+ E++ +W+A++S +GD + ++ F EM +
Sbjct: 413 ITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ 472
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
G+ P+ TF + L CG + KG + LK E + + +VDM + GR+ E
Sbjct: 473 GIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLK-IGFEMMVEVGNSLVDMYSKCGRINE 531
Query: 513 AEELVGQI 520
AE++ +I
Sbjct: 532 AEKVFRRI 539
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 351/648 (54%), Gaps = 28/648 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL----SFALRMNLIGVVFDAVT 59
YC+ G + L + + + VS+N ++ + ++ +FA GV D T
Sbjct: 59 YCRLGGHARRL--LDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFT 116
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y+ AL+ C G +H+L V G+ V+V N+L++MY+R G + +AR+VFD
Sbjct: 117 YAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAAD 176
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKN--LE 176
+D VSWNA++SGY + G + +L + MMR+ G+ L+ + S C + ++
Sbjct: 177 ERDDVSWNALVSGYVRAG--AQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMD 234
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MN 235
+ +HG +K G+ + V + + ++ Y+K +A +F+ + D NV+ + MI+ +
Sbjct: 235 IAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLC 294
Query: 236 REDA----------VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
R++A +SL+ E++ G+ P + TF +I A ++ ++ G+ IHG +K
Sbjct: 295 RDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHC 354
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F + + + LI +Y M+D + F + +++++W A+ISG QN L A+ F
Sbjct: 355 FQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFH 414
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
++ KP+ +T SV+NA A + G++ K G +G++ + MY +
Sbjct: 415 ELLGAGLKPDPFTISSVMNAC--ASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYAR 472
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + + R F E + +W+A+IS+ A+HG + F EM + V P+ ITFL V
Sbjct: 473 SGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGV 532
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
LT C G++ +G +++M ++Y + P+ H +C+VD+LGR GRL +AE +
Sbjct: 533 LTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHD 592
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ +SLL +CRIH ++E G+ +AD +M+++P+ S SYV + N+Y + G+ + + +R
Sbjct: 593 EPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRD 652
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY-RMAECL 631
MK +GV+KE G SW ++ G+H F +GD +HP S IY ++AE L
Sbjct: 653 VMKERGVKKEPGLSWIELR--SGVHSFVAGDKSHPESNAIYSKLAEML 698
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 228/462 (49%), Gaps = 28/462 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY + G +A +F+ + D VSWN ++SG+ ++ DD L M G+ ++
Sbjct: 156 VSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNS 215
Query: 58 VTYSTALSFCL--DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ + C D +H +VK G DS+V++ +A++ MY++ G L EA +F
Sbjct: 216 FALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALF 275
Query: 116 DEMPNKDSVSWNAILSGYTQD-----GDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
+ + + V +NA+++G +D D EA+ E+ +G+ +F+S AC
Sbjct: 276 KSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACN 335
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
++E GKQIHG +K + +G+ L+ Y D + F + ++V++WT
Sbjct: 336 LAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTA 395
Query: 231 MIS---MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MIS N E A++LF E+ G+ P+ T +++A + + + G I K+
Sbjct: 396 MISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSG 455
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F ++ N I MYAR + + + F E+ +I+SW+A+IS +AQ+G + A++ FF
Sbjct: 456 FGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALR-FF 514
Query: 346 GVIKESK--PNAYTFGSVLNAV--GAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALL 399
+ ++K PN TF VL A G D LK+ + +K P + + ++
Sbjct: 515 NEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYE-----TMKEEYALSPTIKHCTCVV 569
Query: 400 DMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYE 440
D+ G+ G + +++ ++ E W +++++ H D E
Sbjct: 570 DLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDME 611
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 203/634 (32%), Positives = 337/634 (53%), Gaps = 32/634 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFAL----RMNLIGVVF 55
+N+Y K G KA +F ++ N D+VSWN +++G+ +K SF + RM +
Sbjct: 52 VNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLP 111
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T+S + GLQ H+L +K +V+VG++LI MY + G +++AR+VF
Sbjct: 112 NGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVF 171
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D +P +++VSW I+SGY + EA + M R+ D +TS SA +
Sbjct: 172 DTIPERNTVSWATIISGYAME-RMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLV 230
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
GKQIH +++K G + SVGN L++ Y KC DA K F D++ I+W+ MI+
Sbjct: 231 HYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGY 290
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A++LF M L+G P++ TF+G+I+A S ++EG+ IHG +K + +
Sbjct: 291 AQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQI 350
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ A+ S+ D+ K FD L +I+ W + +Q ++
Sbjct: 351 YFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTS------------CRMQ-----MER 393
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ T SVL A + +L+ G++ H+ IK G + +GSAL MY K GS+ +
Sbjct: 394 IMPHELTMASVLRACSSLA--ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLED 451
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
VF + W A+IS L+++G+ + F+E+ + +PD +TF++VL+ C
Sbjct: 452 GNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSH 511
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G+ F ML ++ I P +HY+CMVD+L R G+L E +E + G+ + +
Sbjct: 512 MGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWR 571
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
LLGACR + N E+G + LM++ S +Y+L+S++Y G + V +R+ MK +G
Sbjct: 572 ILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRG 631
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
V KE G SW ++ +H F GD HP+ +I
Sbjct: 632 VNKEPGCSWIELK--SQVHVFVVGDQIHPQIVKI 663
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 238/482 (49%), Gaps = 30/482 (6%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
MNL + ++ L C + G +H+ +++ G S VY+ N+L+ +Y++ G
Sbjct: 1 MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 60
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH-VSFTSAA 166
+V+A+ VF+ + NKD VSWN +++GY+Q G G ++ L + MR L + +F+
Sbjct: 61 IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 120
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
+A G Q H ++IK V VG+ L++ Y K DA KVF + +RN +
Sbjct: 121 TAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTV 180
Query: 227 SWTTMIS---MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
SW T+IS M R +A LF MR + + + ++ A+++ +LV G+ IH L
Sbjct: 181 SWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLA 240
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
+K LS SV N L+TMY + + D+ K F+ ++ I+W+A+I+GYAQ G S A+
Sbjct: 241 LKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEAL 300
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F+ + + +KP+ +TF V+N A DI +L+ G++ H + +K G +
Sbjct: 301 NLFYNMHLNGNKPSEFTFVGVIN---ACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFD 357
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
+ K GS+ ++++ F+ +E WT+ M+ + + P +
Sbjct: 358 YLKAKCGSLVDARKGFDYLKEPDIVLWTSC------------------RMQMERIMPHEL 399
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
T SVL C + +G+ + +K Y S + M + G LE+ + +
Sbjct: 400 TMASVLRACSSLAALEQGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGSLEDGNLVFRR 458
Query: 520 IP 521
+P
Sbjct: 459 MP 460
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/601 (31%), Positives = 333/601 (55%), Gaps = 14/601 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS--DDALSFALRMNLIGVVFDAV 58
++MY + G A +F+NL + + +WN +++G+ + ++A M G D
Sbjct: 344 ISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEGLMEEAFRLFRAMEQKGFQPDKF 403
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
TY++ L+ C D G +LHS I G +++ V ALI+MY++ G EAR+VF++M
Sbjct: 404 TYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQM 463
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P ++ +SWNA +S + D G EA A +M R + DH++F + ++C ++LE G
Sbjct: 464 PERNVISWNAFISCCCRH-DLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERG 522
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
+ IHG + G ++ V N L+S Y +C DA +VF R+ R++ SW MI+ N +
Sbjct: 523 RYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQH 582
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
A LF++ R +G + TFI ++ A++ + GRMIHGL K F + V
Sbjct: 583 GANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVL 642
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
LI MY++ S++D+E VF + ++++ WNA+++ YA + A++ F + E
Sbjct: 643 TTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVN 702
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P++ T+ + LNA A +++HG++ H+ + + G+++D V ++L++MY + G + ++
Sbjct: 703 PDSSTYSTALNAC--ARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAK 760
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+VF + + +W A+I+ ++G + ++ M + P+ TF S+L+ + G
Sbjct: 761 QVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLG 820
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+ +S+ K++++EPS HY+ MV LGR G L+EAEE + +I + +SL
Sbjct: 821 EEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAALMWESL 880
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYV--LMSNLYAEKGDWEMVAILRKGMKSKG 590
L ACRIH NVE+ E + L+ + S + LMS +YA G WE V++L+ M+ G
Sbjct: 881 LVACRIHLNVELAETAVEHLLDAKAQASPAVCEQLMS-IYAAAGRWEDVSVLKTTMQEAG 939
Query: 591 V 591
+
Sbjct: 940 L 940
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 182/526 (34%), Positives = 290/526 (55%), Gaps = 16/526 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFALRMNLI--GVVFDA 57
+NMYCK G + A +FN + ++VSW ++SG+ + D + AL LI G+ +
Sbjct: 243 INMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNK 302
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V++++ L C + GL+LH+ I + GL+ EV VGNALI+MYSR G L AR+VFD
Sbjct: 303 VSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDN 362
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEKNLE 176
+ + + +WNA+++GY G+ +E L M +KG + D ++ S + C +L+
Sbjct: 363 LRSLNRTTWNAMIAGY---GEGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLD 419
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MN 235
GK++H G+ T ++V L+S Y+KC +A KVF +M +RNVISW IS
Sbjct: 420 RGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCC 479
Query: 236 RED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
R D A FK+MR D V P+ +TFI L+++ + ++ GR IHG + LS
Sbjct: 480 RHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNH 539
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE- 350
V N LI+MY R ++ D+ +VF + R++ SWNA+I+ Q+G + +A F E
Sbjct: 540 VANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEG 599
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
K + YTF +VL AV ED L G+ H + K G D V + L+ MY K GS+ +
Sbjct: 600 GKGDKYTFINVLRAVANLED--LDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRD 657
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF+ QEK W A+++A A + + F++M+ +GV PDS T+ + L C R
Sbjct: 658 AENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACAR 717
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ G+ + + LK+ +E + +++M R G L A+++
Sbjct: 718 LTAVEHGKKIH-AQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQV 762
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 161/480 (33%), Positives = 253/480 (52%), Gaps = 21/480 (4%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
GV + Y+ L C+ + G ++H + ++Y+ N LI+MYS+ G + +A
Sbjct: 95 GVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDA 154
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
VF M +KD VSWNA++SGY G EA +M R+GL+ + +F S SAC
Sbjct: 155 NNVFQAMEDKDVVSWNAMISGYALHGR-DQEAADLFYQMQREGLKPNQNTFISILSACQS 213
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
LE G+QIH K GY + V+V L++ Y KC A KVF M +RNV+SWT M
Sbjct: 214 PIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAM 273
Query: 232 IS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS + +A++LF+++ G+ PN V+F ++ A + N + EG +H +
Sbjct: 274 ISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGL 333
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
E V N LI+MY+R S+ ++ +VFD L +WNA+I+GY + GL A + F
Sbjct: 334 EQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRA 392
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ ++ +P+ +T+ S+L A+ L G+ HS I G +D V +AL+ MY K
Sbjct: 393 MEQKGFQPDKFTYASLLAIC--ADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKC 450
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GS E+++VFN+ E++ +W A IS RH + FK+M V PD ITF+++L
Sbjct: 451 GSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLL 510
Query: 466 TVCGRNGMIHKGRHLFDS-----MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
C + +GR++ ML + H+ + ++ M GR G L +A E+ +I
Sbjct: 511 NSCTSPEDLERGRYIHGKINQWGMLSNNHVA------NALISMYGRCGNLADAREVFYRI 564
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 167/538 (31%), Positives = 283/538 (52%), Gaps = 32/538 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K G + A +F + + D+VSWN ++SG+ + +A +M G+ +
Sbjct: 142 ISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQ 201
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + LS C FG Q+HS I K G +S+V V ALI MY + G L AR+VF+E
Sbjct: 202 NTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNE 261
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++ VSW A++SGY Q GD EA+ +++R G++ + VSF S AC + +L
Sbjct: 262 MRERNVVSWTAMISGYVQHGD-SREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGE 320
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
G ++H + G V VGN L+S YS+C +A +VF + N +W MI+
Sbjct: 321 GLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE 380
Query: 236 --REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E+A LF+ M G P+ T+ L+ + + G+ +H T + ++ +V
Sbjct: 381 GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVA 440
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
LI+MYA+ S +++ KVF+++ R +ISWNA IS ++ L A QAF + ++
Sbjct: 441 TALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVN 500
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ TF ++LN+ + ED L+ G+ H I + G+ S+ V +AL+ MYG+ G++ +++
Sbjct: 501 PDHITFITLLNSCTSPED--LERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAR 558
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV----- 467
VF + + +W A+I+A +HG S + F++ ++G + D TF++VL
Sbjct: 559 EVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLE 618
Query: 468 ---CGR--NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
GR +G++ KG KD + + ++ M + G L +AE + +
Sbjct: 619 DLDAGRMIHGLVEKG-----GFGKDIRV------LTTLIKMYSKCGSLRDAENVFSTV 665
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 226/461 (49%), Gaps = 31/461 (6%)
Query: 74 LFGLQLHSLI--VKFGLDSEVYVGNAL---ITMYSRWGRLVEARRVFDEMPN--KDSVSW 126
+ G+Q LI + D + Y GN+ T R+ E+ +DE P +D+
Sbjct: 22 VLGVQSFQLIGSQHWCYDGKAYFGNSTPISFTSNDEERRIRESNNTWDEGPKIVRDTREG 81
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSI 186
+I G GV+A L + C K+L GK++H
Sbjct: 82 KSIKGAVQLLGKRGVQANLNF--------------YARRLQQCVLAKSLAEGKKVHDHMR 127
Query: 187 KMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVS 241
+ + + N+L+S YSKC DAN VF+ M D++V+SW MIS ++A
Sbjct: 128 SAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAAD 187
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
LF +M+ +G+ PN TFI ++ A ++ G IH K + S+ +V LI MY
Sbjct: 188 LFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYC 247
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
+ S++ + KVF+E+ R ++SW A+ISGY Q+G S A+ F +I+ +PN +F S
Sbjct: 248 KCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFAS 307
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
+L A D L G + H++I + GL+ + +VG+AL+ MY + GS+ +++VF+ +
Sbjct: 308 ILGACTNPND--LGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRS 365
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+ W A+I+ G E F+ ME KG +PD T+ S+L +C + +G+ L
Sbjct: 366 LNRTTWNAMIAGYG-EGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKEL 424
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
S + + + ++ M + G EEA ++ Q+P
Sbjct: 425 H-SQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMP 464
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/591 (33%), Positives = 318/591 (53%), Gaps = 13/591 (2%)
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGL-QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
+ + + + S LDH L Q+H+ +V GL ++ + G + A
Sbjct: 63 IPYSGFDFDSFFSSLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYA 122
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
R+VFDE P WNAI+ GY+ +G +AI M G+ D + AC
Sbjct: 123 RKVFDEFPEPSVFLWNAIIRGYSSHNFFG-DAIEMYSRMQASGVNPDGFTLPCVLKACSG 181
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
LE+GK++HG ++G+ + V V N L++ Y+KC A VF + DRN++SWT+M
Sbjct: 182 VPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSM 241
Query: 232 ISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS + +A+ +F +MR V P+ + + ++ A + +++G+ IHG +K
Sbjct: 242 ISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGL 301
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
EP + L MYA+ + + FD++ ++ WNA+ISGYA+NG + AV F
Sbjct: 302 EFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQE 361
Query: 347 VI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+I K + ++ T S + + A+ SL + +I K +D V +AL+DM+ K
Sbjct: 362 MISKNIRTDSITVRSAI--LACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKC 419
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GS+ ++ VF+ T +K W+A+I HG + ++ F M+ GV P+ +TF+ +L
Sbjct: 420 GSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLL 479
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
T C +G++ +G LF SM K Y IE HY+C+VD+LGR G L EA + + +P PG
Sbjct: 480 TACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPG 538
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+SV +LLGAC+I+ +V +GE A+ L ++P +G YV +SNLYA W+ VA +R
Sbjct: 539 VSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRIL 598
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
M+ KG+ K++G+S ++ L F GD +HPR +EI+ E L +K
Sbjct: 599 MREKGLSKDLGYSLIEIN--GKLQAFRVGDKSHPRFKEIFEELESLERRLK 647
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 214/449 (47%), Gaps = 18/449 (4%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTAL 64
G+ A +F+ P + WN ++ G+ + DA+ RM GV D T L
Sbjct: 117 GEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVL 176
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
C G ++H I + G +S+V+V N L+ +Y++ GR+ +AR VF+ + +++ V
Sbjct: 177 KACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIV 236
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
SW +++SGY Q+G +EA+ +M ++ ++ D ++ S A ++LE GK IHG
Sbjct: 237 SWTSMISGYGQNG-LPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGC 295
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DA 239
+KMG + L + Y+KC A F +M NV+ W MIS + +A
Sbjct: 296 VVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEA 355
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
V LF+EM + + +T I A + + + + KT + ++ V LI M
Sbjct: 356 VGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDM 415
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTF 358
+A+ S+ + +VFD ++++ W+A+I GY +G A+ F+ + + PN TF
Sbjct: 416 FAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTF 475
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
+L A + + + G + G+++ + ++D+ G+ G + E+
Sbjct: 476 VGLLTACNHSGLV--EEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTM 533
Query: 419 Q-EKSEFAWTAIISA--LARH---GDYES 441
E W A++ A + RH G+Y +
Sbjct: 534 PIEPGVSVWGALLGACKIYRHVTLGEYAA 562
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 153/280 (54%), Gaps = 9/280 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVT 59
+Y K G+ ++A +F L++ +IVSW +++SG+ ++ +AL +M V D +
Sbjct: 213 LYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIA 272
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ L D E G +H +VK GL+ E + +L MY++ G+++ AR FD+M
Sbjct: 273 LVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQME 332
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ + WNA++SGY ++G Y EA+ EM+ K +R D ++ SA AC +L+L K
Sbjct: 333 IPNVMMWNAMISGYAKNG-YTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAK 391
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SM 234
+ K Y V V L+ ++KC A +VF R D++V+ W+ MI
Sbjct: 392 WMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHG 451
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+DA+ LF M+ GVCPNDVTF+GL+ A + LV+EG
Sbjct: 452 RGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEG 491
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++M+ K G D A +F+ + D+V W+ ++ G+ + DA+ M GV +
Sbjct: 413 IDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPND 472
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT+ L+ C +H G + G +L + +G+++ ++ + R G L EA
Sbjct: 473 VTFVGLLTAC-NHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFIT 531
Query: 117 EMPNKDSVS-WNAILSG-----YTQDGDYGVEAILAL 147
MP + VS W A+L + G+Y E + +L
Sbjct: 532 TMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSL 568
>gi|297833250|ref|XP_002884507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330347|gb|EFH60766.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 676
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/590 (33%), Positives = 323/590 (54%), Gaps = 25/590 (4%)
Query: 54 VFDAVTYSTALSFCLDHEGFL--FGLQLHSLIVKFG-----LDSEVY-----VGNALITM 101
+ + V S LS C EG+ G LH+ IVK +D++++ V N+L+++
Sbjct: 41 LLNHVDMSLLLSIC-GREGWFPYLGPCLHASIVKNPEFFDPVDADIHRNALVVWNSLLSL 99
Query: 102 YSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVS 161
Y + G+L +A ++FDEMP +D +S N + G+ ++ + E+ L++ M D +
Sbjct: 100 YVKCGKLGDALKLFDEMPVRDVISQNIVFYGFLRNRE--TESGFVLLKRMLGSGGFDQAT 157
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
T S C + + K IH ++I GY +SVGN L+++Y KC + VF M
Sbjct: 158 LTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRWVFSEMA 217
Query: 222 DRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
RNVI+WT +IS ED + LF MR V PN VT++ + A S ++ EG+
Sbjct: 218 HRNVITWTAVISGLIENELHEDGLRLFCLMRRGLVHPNSVTYLSALAACSGSQMIVEGQQ 277
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
IH L K SE + + L+ MY++ S++D+ K+F+ + +S ++ G AQNG
Sbjct: 278 IHALLWKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQEVDEVSMTVILVGLAQNGS 337
Query: 337 SLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A+Q F +++ + +A ++L + D SL G++ HS +IK + V
Sbjct: 338 EEEAIQFFIRMLQAGVEIDANVVSAILGV--SFVDNSLGLGKQLHSLVIKRKFCGNTFVN 395
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+ L++MY K G + +SQ VF +++ +W ++I+A ARHG + + ++EM V+
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P +TFLS+L C G+I KGR L + M + + I+P +HY+C++DMLGR G ++EA+
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIKPRTEHYTCIIDMLGRAGLMKEAKS 515
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
+ +P P + Q+LLGAC HG+ E+GE A+ L + P S +++LM+N+Y+ +G
Sbjct: 516 FIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFETAPDSSAAHILMANIYSSRGK 575
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
W+ A K MK GV KE G SW ++ H F D HP++E IY
Sbjct: 576 WKERAKTIKRMKEMGVTKETGISWIEME--KKTHSFVVEDKMHPQAEAIY 623
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 233/452 (51%), Gaps = 17/452 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS-FALRMNLIGVV-FDAV 58
+++Y K G+ AL +F+ + D++S N V GF ++ + S F L ++G FD
Sbjct: 97 LSLYVKCGKLGDALKLFDEMPVRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDQA 156
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T + LS C E L +H+L + G D E+ VGN LIT Y + G V R VF EM
Sbjct: 157 TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRWVFSEM 216
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLEL 177
+++ ++W A++SG ++ + E L L +MR+GL + V++ SA +AC + +
Sbjct: 217 AHRNVITWTAVISGLIENELH--EDGLRLFCLMRRGLVHPNSVTYLSALAACSGSQMIVE 274
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+QIH + K G + + + + LM YSKC DA K+F + + +S T ++
Sbjct: 275 GQQIHALLWKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQEVDEVSMTVILVGLAQ 334
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + E+A+ F M GV D + I +S + N + G+ +H L IK F
Sbjct: 335 NGSEEEAIQFFIRMLQAGV-EIDANVVSAILGVSFVDNSLGLGKQLHSLVIKRKFCGNTF 393
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
V N LI MY++ + DS+ VF + R +SWN++I+ +A++G LAA++ + + E
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIF 409
KP TF S+L+A I G+ + + +V G+ + ++DM G+ G +
Sbjct: 454 VKPTDVTFLSLLHACSHVGLID--KGRELLNEMKEVHGIKPRTEHYTCIIDMLGRAGLMK 511
Query: 410 ESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
E++ + K + W A++ A + HGD E
Sbjct: 512 EAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/655 (31%), Positives = 344/655 (52%), Gaps = 28/655 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS---FAL------RMNLI 51
++ Y +G AL +F + ++VSWN+++ F SD+ LS F L + + I
Sbjct: 226 VSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVF--SDNGLSEECFLLLGQMMEKDDEI 283
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
D T +T L C G +H L +K LD EV V NAL+ MYS+ G + +A
Sbjct: 284 AFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDA 343
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG---LRLDHVSFTSAASA 168
+ +F NK+ VSWN ++ G++ GD + L+ M G LR D V+ +A
Sbjct: 344 QVIFKLNNNKNVVSWNTMVGGFSAAGD--IHKTFDLLRQMLAGGGDLRADEVTILNAVPV 401
Query: 169 CGHEKNLELGKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
C E L K++H S+K + + V N +++Y+KC A++VF + + V S
Sbjct: 402 CFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNS 461
Query: 228 WTTMI---SMNREDAVSL--FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
W +I S + + +SL + +M+ G+ P+ T L+ A S +K G+ +HGL I
Sbjct: 462 WNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLII 521
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
+ + V L+++Y + + +FD + + ++SWN +++GY QNG A+
Sbjct: 522 RNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALS 581
Query: 343 AFFG-VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F V+ +P + SV A SL+ G+ H + +K L+ + + +++DM
Sbjct: 582 LFRQMVLYGVQPCEISMMSVFGACSLLP--SLRLGREAHGYALKCLLEDNAFIACSVIDM 639
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K GS+ ES +VFN +E+S +W A++ HG + + F+EM+ G PD +TF
Sbjct: 640 YAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTF 699
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG-QI 520
L VLT C +G++H+G D M + + P+ HY+C++DML R G+L+EA ++ ++
Sbjct: 700 LGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEM 759
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVA 580
PG+ + LL +CRIH N+EMGE+IA L EP +YVL+SNLYA G W+ V
Sbjct: 760 SEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVR 819
Query: 581 ILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
+R+ MK +RK+ G SW ++ + F +G+++ EEI + L E+
Sbjct: 820 KVRQRMKEMSLRKDAGCSWIELN--GKVFSFVAGESSLDGFEEIKSLWSVLEREI 872
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/534 (26%), Positives = 267/534 (50%), Gaps = 29/534 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRM-NLIGVVFD 56
+ MY G D + +F+ L ++ WN V+S + +++ + L ++M G++ D
Sbjct: 124 ITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPD 183
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ + C GL +H L+VK L +V+V NAL++ Y G + +A RVF
Sbjct: 184 NFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFK 243
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFT-------SAASAC 169
MP ++ VSWN+++ ++ +G E L L +MM K D ++FT + C
Sbjct: 244 IMPERNLVSWNSMIRVFSDNG-LSEECFLLLGQMMEKD---DEIAFTPDVATLATVLPVC 299
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
++ + +GK +HG+++K+ V V N LM YSKC DA +F+ +++NV+SW
Sbjct: 300 ARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWN 359
Query: 230 TMI-----SMNREDAVSLFKEMRLDG--VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
TM+ + + L ++M G + ++VT + + +++ + +H +
Sbjct: 360 TMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSL 419
Query: 283 KTNFL-SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
K F+ + V N + YA+ S+ + +VF + + + SWNALI GY+Q+ ++
Sbjct: 420 KQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSL 479
Query: 342 QAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
A+F +K S P+ +T S+L+A + SLK G+ H II+ L+ D V +LL
Sbjct: 480 DAYFQ-MKSSGLLPDLFTVCSLLSACSQIK--SLKLGKEVHGLIIRNRLERDSFVYISLL 536
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
+Y G + + +F+ ++K+ +W +++ ++G E ++ F++M GV+P I
Sbjct: 537 SLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEI 596
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ +SV C + GR LK +E + ++DM + G + E+
Sbjct: 597 SMMSVFGACSLLPSLRLGREAHGYALKCL-LEDNAFIACSVIDMYAKNGSVMES 649
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 221/458 (48%), Gaps = 21/458 (4%)
Query: 75 FGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGY 133
G ++H L+ + L ++ + +ITMYS G ++R VFD + K+ WNA++S Y
Sbjct: 99 LGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSY 158
Query: 134 TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
+++ Y + + + GL D+ +F AC +++G +HG+ +K
Sbjct: 159 SRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVED 218
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS------LFKEMR 247
V V N L+S Y DA +VF+ M +RN++SW +MI + ++ +S L + M
Sbjct: 219 VFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMME 278
Query: 248 LD---GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
D P+ T ++ + + G+ +HGL +K + E V N L+ MY++
Sbjct: 279 KDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCG 338
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFG----S 360
+ D++ +F + + ++SWN ++ G++ G + F ++++ +
Sbjct: 339 CINDAQVIFKLNNNKNVVSWNTMVGGFSAAG----DIHKTFDLLRQMLAGGGDLRADEVT 394
Query: 361 VLNAVGAA-EDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
+LNAV E+ L + + H + +K + ++ +V +A + Y K GS+ + RVF
Sbjct: 395 ILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSI 454
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+ K+ +W A+I ++ D ++ + +M++ G+ PD T S+L+ C + + G+
Sbjct: 455 RSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGK 514
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ ++++ +E Y ++ + G L A L
Sbjct: 515 EVHGLIIRN-RLERDSFVYISLLSLYIHCGELSTAHVL 551
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 209/474 (44%), Gaps = 57/474 (12%)
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL----MSTYSKCEVTGDANKVFRRMHDR 223
A G K+++LG++IH + + +S +VL ++ YS C D+ VF + +
Sbjct: 90 ASGRRKDIQLGRKIHQL---VSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKK 146
Query: 224 NVISWTTMISMNRE-----DAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMI 277
N+ W +IS + + +F +M + G+ P++ TF ++ A + + V+ G +
Sbjct: 147 NLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAV 206
Query: 278 HGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS 337
HGL +KT + + V N L++ Y S+ D+ +VF + R ++SWN++I ++ NGLS
Sbjct: 207 HGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLS 266
Query: 338 LAAVQAFFGVIKES-----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
++++ P+ T +VL A D + G+ H +K+ LD +
Sbjct: 267 EECFLLLGQMMEKDDEIAFTPDVATLATVLPV--CARDREIGVGKGVHGLAMKLSLDKEV 324
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
+V +AL+DMY K G I ++Q +F K+ +W ++ + GD + ++M
Sbjct: 325 VVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAG 384
Query: 453 G--VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
G +R D +T L+ + VC ++ + L LK + + + V + G L
Sbjct: 385 GGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSL 444
Query: 511 EEAEELVGQIP-----------GG-----------------------PGLSVLQSLLGAC 536
A + I GG P L + SLL AC
Sbjct: 445 SYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSAC 504
Query: 537 RIHGNVEMGERIADALMKME-PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++++G+ + +++ S Y+ + +LY G+ +L M+ K
Sbjct: 505 SQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDK 558
>gi|125563707|gb|EAZ09087.1| hypothetical protein OsI_31353 [Oryza sativa Indica Group]
Length = 810
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/613 (32%), Positives = 337/613 (54%), Gaps = 31/613 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+NMY K G A+ F + ++VSW T ++GF + D+ +S L + + GV +
Sbjct: 212 VNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINK 271
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++ L C Q+H +++K + + V ALI+ Y+ +G + + +VF+E
Sbjct: 272 YTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEE 331
Query: 118 MPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ S W+A +SG + + ++ L M +GLR + + S S+ ++E
Sbjct: 332 AGTVSNRSIWSAFISGVSNHSL--LRSVQLLRRMFHQGLRPNDKCYASVFSSV---NSIE 386
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G Q+H +IK G+ + VG+ L + YS+C+ D+ KVF M +R+ +SWT M++
Sbjct: 387 FGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFA 446
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK----TNFL 287
+ +A F+ M LDG P+ V+ ++ A + + +G+ +HG ++ T F+
Sbjct: 447 THGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETTFI 506
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
++ C I+MY++ + +Q + ++FD C++ + W+++ISGYA NG A+ F +
Sbjct: 507 ND-----CFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLM 561
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ S + ++Y S+L+ DI+ + + H + IK G+ SD V S+L+ +Y +
Sbjct: 562 VAASIRIDSYICSSILSLCA---DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRS 618
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G++ +S++VF+E AWT II A+HG ++ + F M GVRPD++ +SVL
Sbjct: 619 GNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVL 678
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C RNG++ +G + F+SM Y +EP HY CMVD+LGR GRL EA+ V +P P
Sbjct: 679 SACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPD 738
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
L V +L+ ACR+H + +G R + ++ SGS+ +SN+ A GDWE VA +RK
Sbjct: 739 LMVWSTLVAACRVHDDTVLG-RFVENKIREGNYDSGSFATLSNILANSGDWEEVARIRKT 797
Query: 586 MKSKGVRKEVGFS 598
M KGV KE G+S
Sbjct: 798 M--KGVNKEPGWS 808
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 161/594 (27%), Positives = 283/594 (47%), Gaps = 63/594 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG-FEKSDDALSFALRMNLI--GVVFDA 57
+++ KSG+ AL +F + + V WN +SG + L+ + +++ ++
Sbjct: 111 VDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNS 170
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TYS ALS C E G +H L+++ + +V+VG +L+ MY++ G + A R F
Sbjct: 171 FTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWR 230
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ VSW ++G+ QD D V A+L L EM+R G+ ++ + TS AC +
Sbjct: 231 MPVRNVVSWTTAIAGFVQD-DEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVRE 289
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR---MHDRNVISWTTMIS- 233
QIHG+ +K V L+STY+ + KVF + +R++ W+ IS
Sbjct: 290 ASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISG 347
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +V L + M G+ PND + + ++ N ++ G +H IK F+
Sbjct: 348 VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSV---NSIEFGGQLHSSAIKEGFIHGI 404
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + L TMY+R +++QDS KVF+E+ R+ +SW A+++G+A +G S+ A F +I +
Sbjct: 405 LVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILD 464
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+ + ++L+A +E L G+ H H ++V + + MY K +
Sbjct: 465 GFKPDHVSLTAILSACNRSE--CLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQ 521
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++R+F+ T K + W+++IS A +G E ++ F+ M +R DS S+L++C
Sbjct: 522 TARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCA 581
Query: 470 -----------------------------------RNGMIHKGRHLFDSMLKDYHIEPSP 494
R+G + R +FD + P
Sbjct: 582 DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV-----PDL 636
Query: 495 DHYSCMVDMLGRVGRLEEAE---ELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
++ ++D + G + A +L+ Q+ P VL S+L AC +G VE G
Sbjct: 637 VAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQG 690
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 233/453 (51%), Gaps = 20/453 (4%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q++ K GL YV ++ + ++ GRL +A RVF + +V WNA +SG ++G
Sbjct: 90 QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNG 149
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ G+ A+ +M+ + +++ A SAC + L +G+ +HG+ ++ V VG
Sbjct: 150 EGGL-AVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVC 252
L++ Y+KC G A + F RM RNV+SWTT I+ +D A+ L +EM +GV
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
N T ++ A + ++V+E IHG+ +KT + V LI+ Y F ++ SEKV
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKV 328
Query: 313 FDE---LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
F+E +S R I W+A ISG + + L L +VQ + + +PN + SV ++V
Sbjct: 329 FEEAGTVSNRSI--WSAFISGVSNHSL-LRSVQLLRRMFHQGLRPNDKCYASVFSSVN-- 383
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
S++ G + HS IK G +VGSAL MY + ++ +S +VF E QE+ +WTA
Sbjct: 384 ---SIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTA 440
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+++ A HG F+ M G +PD ++ ++L+ C R+ + KG+ + L+ Y
Sbjct: 441 MVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVY 500
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ C + M + ++ A + P
Sbjct: 501 GETTFIN--DCFISMYSKCQGVQTARRIFDATP 531
>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/612 (31%), Positives = 333/612 (54%), Gaps = 26/612 (4%)
Query: 3 MYCKSGQ-FDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI-------GVV 54
MY K G AL +F L D+V+WN ++SGF ++ D F + L G+
Sbjct: 193 MYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGD---FRMVQRLFSEMWEEQGLK 249
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D +T+++ L C + Q+H ++ KFG + +V V +A++ +Y++ + R++
Sbjct: 250 PDRITFASLLKCCSVLNEVM---QIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKI 306
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD M KD+ W++++SGYT + + G EA+ +M R+ ++LD +S AC ++
Sbjct: 307 FDSMEKKDNFVWSSMISGYTMN-NRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIED 365
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L G Q+HG+ IK G+ V +VL++ Y+ GD K+F R+ D+++++W +MI
Sbjct: 366 LNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILA 425
Query: 235 NRED------AVSLFKEMRLDGVCP-NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ LF+E+R T + ++ + + + GR IH L +K++
Sbjct: 426 QARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLC 485
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
V N L+ MY+ + + D+ K F ++ ++ SW+++I QN + A++ +
Sbjct: 486 RHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEM 545
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ E N ++ L ++ +++ G++ H IK G D +GS+++DMY K G+
Sbjct: 546 LDEG-INFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGN 604
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I ES++VF+E + +E + AIIS A HG + + ++E GV P+ +TFL++++
Sbjct: 605 IEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSA 664
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G + + HLF ML Y I+P +HYSC+VD GR GRLEEA ++V Q G S
Sbjct: 665 CSHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIV-QKDGSE--S 721
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
++LL ACR H N ++GE+ A ++++ P+ Y+L+SN+Y E+G+WE RK M
Sbjct: 722 AWRTLLSACRNHSNRKIGEKSAMKMIELNPSDHAPYILLSNIYIEEGNWEEALNCRKKMA 781
Query: 588 SKGVRKEVGFSW 599
V+K+ G SW
Sbjct: 782 KIRVKKDPGNSW 793
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/581 (26%), Positives = 275/581 (47%), Gaps = 42/581 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y KS F A +F+ + N ++V+W T++S K A M + +
Sbjct: 90 LSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNE 149
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWG-RLVEARRVFD 116
T++ L C + E + GLQ+H L+V+ GL+ E + G++L+ MY + G L +A RVF
Sbjct: 150 NTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFY 209
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +D V+WN ++SG+ Q+GD+ + L +GL+ D ++F S C L
Sbjct: 210 GLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCS---VLN 266
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
QIHG+ K G V V + ++ Y+KC K+F M ++ W++MIS
Sbjct: 267 EVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYT 326
Query: 234 MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
MN E+AV+ FK+M V + + A + G +HGL IK ++
Sbjct: 327 MNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCF 386
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + L+ +YA F + D EK+F + ++I++WN++I A+ G F ++ +
Sbjct: 387 VASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRT 446
Query: 352 KPNAYTF----GSVLNAV--GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
TF G+ L AV +D L G++ HS I+K L +VG+AL+ MY +
Sbjct: 447 -----TFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSEC 501
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
I ++ + F + K + +W++II ++ + KEM ++G+ S + +
Sbjct: 502 KQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCI 561
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC-------MVDMLGRVGRLEEAEELVG 518
+ C + I +G+ L H+ YSC ++DM + G +EE+E++
Sbjct: 562 SACSQLLTISEGKQL--------HVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFD 613
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+ P +++ HG ++ + L K+E G
Sbjct: 614 E-QLKPNEVTFNAIISGYAHHGK---AQQAIEVLSKLEKNG 650
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 177/352 (50%), Gaps = 20/352 (5%)
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
QIH I Y + + N L+S YSK A+K+F +M +RNV++WTT+IS + +
Sbjct: 69 QIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYG 128
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
A +F MR+ PN+ TF L+ A + L G IHGL ++ E +
Sbjct: 129 SVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGS 188
Query: 295 CLITMYAR-FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-- 351
L+ MY + + ++D+ +VF L R++++WN +ISG+AQNG VQ F + E
Sbjct: 189 SLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNG-DFRMVQRLFSEMWEEQG 247
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+ TF S+L ++ HG + K G + D +V SA++D+Y K +
Sbjct: 248 LKPDRITFASLLKCCSVLNEVMQIHGI-----VYKFGAEVDVVVESAMVDLYAKCRDVSS 302
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+++F+ ++K F W+++IS + E +N FK+M + V+ D S L C
Sbjct: 303 CRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVE 362
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
++ G + M+K+ H D + S ++++ G L + E+L +I
Sbjct: 363 IEDLNTGVQVHGLMIKNGH---QNDCFVASVLLNLYASFGELGDVEKLFSRI 411
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 205/420 (48%), Gaps = 18/420 (4%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ ++ S+ ++ N L++ YS+ A ++FD+MPN++ V+W ++S + + G
Sbjct: 69 QIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYG 128
Query: 138 DYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
V + MR R + +F AC + + +G QIHG+ ++ G
Sbjct: 129 --SVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFA 186
Query: 197 GNVLMSTYSK-CEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEM-RLD 249
G+ L+ Y K + DA +VF + +R+V++W MIS ++ LF EM
Sbjct: 187 GSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQ 246
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
G+ P+ +TF L+ S+ N V + IHG+ K + V + ++ +YA+ +
Sbjct: 247 GLKPDRITFASLLKCCSVLNEVMQ---IHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSC 303
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
K+FD + ++ W+++ISGY N AV F + ++ K + + S L A
Sbjct: 304 RKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEI 363
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
ED L G + H +IK G +D V S LL++Y G + + +++F+ +K AW +
Sbjct: 364 ED--LNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNS 421
Query: 429 IISALARHGD-YESVMNQFKEMENKG-VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+I A AR G M F+E+ ++ T ++VL C ++ + GR + ++K
Sbjct: 422 MILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVK 481
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 111/202 (54%), Gaps = 5/202 (2%)
Query: 270 LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALIS 329
++ + IH I T ++S+ + N L++ Y++ + + K+FD++ R +++W LIS
Sbjct: 63 ILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLIS 122
Query: 330 GYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
+ + G A + F + + + +PN TF +L A E S+ G + H +++ GL
Sbjct: 123 SHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSV--GLQIHGLLVRCGL 180
Query: 389 DSDPIVGSALLDMYGKRG-SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+ + GS+L+ MY K G + ++ RVF E+ AW +IS A++GD+ V F
Sbjct: 181 EREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFS 240
Query: 448 EM-ENKGVRPDSITFLSVLTVC 468
EM E +G++PD ITF S+L C
Sbjct: 241 EMWEEQGLKPDRITFASLLKCC 262
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 46/108 (42%)
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
+L+ + I L + H+ +I S + + LL Y K + + ++F++
Sbjct: 52 LLSLAKKSNPIILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPN 111
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ WT +IS+ ++G F M RP+ TF +L C
Sbjct: 112 RNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRAC 159
>gi|46403989|gb|AAS93059.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 810
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/613 (32%), Positives = 337/613 (54%), Gaps = 31/613 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+NMY K G A+ F + ++VSW T ++GF + D+ +S L + + GV +
Sbjct: 212 VNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINK 271
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++ L C Q+H +++K + + V ALI+ Y+ +G + + +VF+E
Sbjct: 272 YTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEE 331
Query: 118 MPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ S W+A +SG + + ++ L M +GLR + + S S+ ++E
Sbjct: 332 AGTVSNRSIWSAFISGVSNHSL--LRSVQLLRRMFHQGLRPNDKCYASVFSSV---NSIE 386
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G Q+H +IK G+ + VG+ L + YS+C+ D+ KVF M +R+ +SWT M++
Sbjct: 387 FGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFA 446
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK----TNFL 287
+ +A F+ M LDG P+ V+ ++ A + + +G+ +HG ++ T F+
Sbjct: 447 THGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETTFI 506
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
++ C I+MY++ + +Q + ++FD C++ + W+++ISGYA NG A+ F +
Sbjct: 507 ND-----CFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLM 561
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ S + ++Y S+L+ DI+ + + H + IK G+ SD V S+L+ +Y +
Sbjct: 562 VAASIRIDSYICSSILSLCA---DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRS 618
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G++ +S++VF+E AWT II A+HG ++ + F M GVRPD++ +SVL
Sbjct: 619 GNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVL 678
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C RNG++ +G + F+SM Y +EP HY CMVD+LGR GRL EA+ V +P P
Sbjct: 679 SACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPD 738
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
L V +L+ ACR+H + +G R + ++ SGS+ +SN+ A GDWE VA +RK
Sbjct: 739 LMVWSTLVAACRVHDDTVLG-RFVENKIREGNYDSGSFATLSNILANSGDWEEVARIRKT 797
Query: 586 MKSKGVRKEVGFS 598
M KGV KE G+S
Sbjct: 798 M--KGVNKEPGWS 808
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 281/570 (49%), Gaps = 30/570 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG-FEKSDDALSFALRMNLI--GVVFDA 57
+++ KSG+ AL +F + + V WN +SG + L+ + +++ ++
Sbjct: 111 VDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNS 170
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TYS ALS C E G +H L+++ + +V+VG +L+ MY++ G + A R F
Sbjct: 171 FTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWR 230
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ VSW ++G+ QD D V A+L L EM+R G+ ++ + TS AC +
Sbjct: 231 MPVRNVVSWTTAIAGFVQD-DEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVRE 289
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR---MHDRNVISWTTMIS- 233
QIHG+ +K V L+STY+ + KVF + +R++ W+ IS
Sbjct: 290 ASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISG 347
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +V L + M G+ PND + + ++ N ++ G +H IK F+
Sbjct: 348 VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSV---NSIEFGGQLHSSAIKEGFIHGI 404
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + L TMY+R +++QDS KVF+E+ R+ +SW A+++G+A +G S+ A F +I +
Sbjct: 405 LVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILD 464
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+ + ++L+A +E L G+ H H ++V + + MY K +
Sbjct: 465 GFKPDHVSLTAILSACNRSE--CLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQ 521
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++R+F+ T K + W+++IS A +G E ++ F+ M +R DS S+L++C
Sbjct: 522 TARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCA 581
Query: 470 RNGMIHKGRHLFDSMLKDYHIEP----SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
R + L Y I+ S +V + R G ++++ ++ +I P
Sbjct: 582 -----DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEI-SVPD 635
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKM 555
L +++ HG+ + + D ++++
Sbjct: 636 LVAWTTIIDGYAQHGSSQNALAMFDLMVQL 665
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 233/453 (51%), Gaps = 20/453 (4%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q++ K GL YV ++ + ++ GRL +A RVF + +V WNA +SG ++G
Sbjct: 90 QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNG 149
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ G+ A+ +M+ + +++ A SAC + L +G+ +HG+ ++ V VG
Sbjct: 150 EGGL-AVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVC 252
L++ Y+KC G A + F RM RNV+SWTT I+ +D A+ L +EM +GV
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
N T ++ A + ++V+E IHG+ +KT + V LI+ Y F ++ SEKV
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKV 328
Query: 313 FDE---LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
F+E +S R I W+A ISG + + L L +VQ + + +PN + SV ++V
Sbjct: 329 FEEAGTVSNRSI--WSAFISGVSNHSL-LRSVQLLRRMFHQGLRPNDKCYASVFSSVN-- 383
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
S++ G + HS IK G +VGSAL MY + ++ +S +VF E QE+ +WTA
Sbjct: 384 ---SIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTA 440
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+++ A HG F+ M G +PD ++ ++L+ C R+ + KG+ + L+ Y
Sbjct: 441 MVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVY 500
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ C + M + ++ A + P
Sbjct: 501 GETTFIN--DCFISMYSKCQGVQTARRIFDATP 531
>gi|302771700|ref|XP_002969268.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
gi|300162744|gb|EFJ29356.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
Length = 849
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 320/582 (54%), Gaps = 17/582 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NM+ K G D+A +F+ + D+ SWN +++ + S +AL RM V D
Sbjct: 266 INMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMP-SEVAVDK 324
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ALS C E G +HS + + GL+++V G AL+TMYSR G L EARRVFD
Sbjct: 325 TTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDG 384
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ K+ VSWN +++ Y +D A+ M+ G+R + + SA + +
Sbjct: 385 ILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVECQS---V 441
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GKQ+HG + G + +G+ L++ Y + GDA +VF ++ +R+V +W ++ +
Sbjct: 442 GKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVG 501
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ F M L+G N TF+ + A+S + V GR +HGL ++ ++ +V
Sbjct: 502 HGQPREALEWFSRMLLEGASGNRATFLLALSAVS-PDRVCYGRRLHGLIAESGLEADNNV 560
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N LI+MYAR +S++D+ FD L + I+SW ++I+ G A+ F + E +
Sbjct: 561 ANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRM--ELE 618
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ TF +VL A + + G+ HS ++GL+S+ V +AL+ M+ K G++ E++
Sbjct: 619 PDRVTFTTVLEACTIVS--AHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEAR 676
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
R+F + + W A++ A+ G +SV++ F M+ +GV PD ITFL+V++ C G
Sbjct: 677 RIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHAG 736
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ KG F SM DY + + Y C++D+L R G+LEEA + + +P GP ++L
Sbjct: 737 LVEKGARTFASMGTDYGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGMPCGPSDVTWKTL 796
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKG 574
L AC+I G+V G A ++++ EP G+ ++V +SN+ + G
Sbjct: 797 LAACKIQGDVRRGSAAARSVIEREPYGAAAFVELSNMSSIAG 838
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 153/568 (26%), Positives = 281/568 (49%), Gaps = 33/568 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+ M+ K A +F + + +V W ++++ F E D A F RM L GV+ D
Sbjct: 70 VRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDR 129
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ + L+ C E G +H LI+ L+S+V +GNAL+ M ++ L A R F
Sbjct: 130 VTFISILNAC---ESLAQGELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQR 186
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D +SW +++ Y ++G EA + M+ +G+ ++++F + +AC ++ EL
Sbjct: 187 MPRRDVISWTGMVTAYARNGHIA-EAFGYYLRMLLEGVVPNNITFLAVLAACSSARDAEL 245
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
++G ++ + + V N ++ +SKC A VF RM +V SW M++ +
Sbjct: 246 ---VYGNVVEAEWESDTMVANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQ 302
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF+ M + V + T + + + +++G+ IH + ++
Sbjct: 303 HGFSSEALELFRRMPSE-VAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVA 361
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN-GLSLAAVQAF-FGVIKE 350
L+TMY+R + ++ +VFD + + ++SWN +I+ Y ++ L A++ F ++
Sbjct: 362 GTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDG 421
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P T LN V A E S+ G++ H I+ GL SD +GSAL++MY + GS+ +
Sbjct: 422 VRPTRTT---ALNVVSAVECQSV--GKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGD 476
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++RVF + E+ FAW AI+ HG + F M +G + TFL L+
Sbjct: 477 ARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVSP 536
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+ + + GR L ++ + +E + + ++ M R LE+A ++ +S
Sbjct: 537 DRVCY-GRRL-HGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVS-WT 593
Query: 531 SLLGACRIHGNVEMG--ERIADALMKME 556
S++ AC V++G + D +ME
Sbjct: 594 SVIAAC-----VDLGSCQEAIDLFQRME 616
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 243/486 (50%), Gaps = 24/486 (4%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
++ C + + ++S I G+ + + G +++ M+ + + +A RVF++M ++
Sbjct: 35 VNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVFEQMLDRSM 94
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
V W ++++ + D D A L M +G+ D V+F S +AC ++L G+ +H
Sbjct: 95 VLWTSMVTAFVDDEDVD-RAWLFFFRMQLEGVLPDRVTFISILNAC---ESLAQGELVHR 150
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NRED 238
+ I + V +GN LM +KC A + F+RM R+VISWT M++ + +
Sbjct: 151 LIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGHIAE 210
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
A + M L+GV PN++TF+ ++ A S ++ +++G ++ + S+ V N I
Sbjct: 211 AFGYYLRMLLEGVVPNNITFLAVLAACSSA---RDAELVYGNVVEAEWESDTMVANASIN 267
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTF 358
M+++ + + VF + ++ SWNA+++ AQ+G S A++ F + E + T
Sbjct: 268 MFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSEVAVDKTTL 327
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
L+ A E SL+ G+ HS + ++GL++D + G+AL+ MY + G + E++RVF+
Sbjct: 328 VIALSTCAAPE--SLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDGI 385
Query: 419 QEKSEFAWTAIISALARHGDYES-VMNQFKEMENKGVRPDSITFLSVLTV--CGRNGMIH 475
K+ +W +I+A R S + F+ M GVRP T L+V++ C G
Sbjct: 386 LGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVECQSVGKQL 445
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
G + + D I S +V+M R G L +A + +I + +++G
Sbjct: 446 HGWIVDTGLYSDSFIG------SALVNMYERTGSLGDARRVFEKIIERDVFA-WNAIVGV 498
Query: 536 CRIHGN 541
C HG
Sbjct: 499 CVGHGQ 504
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 180/371 (48%), Gaps = 16/371 (4%)
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
DH F + C K L ++ G G ++ + KC DA++VF
Sbjct: 27 DHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVF 86
Query: 218 RRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
+M DR+++ WT+M++ +D A F M+L+GV P+ VTFI +++A +
Sbjct: 87 EQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNAC---ESLA 143
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
+G ++H L I N S+ + N L+ M A+ + + + F + R++ISW +++ YA
Sbjct: 144 QGELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYA 203
Query: 333 QNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
+NG A + ++ E PN TF +VL A +A D L +G ++++ +SD
Sbjct: 204 RNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDAELVYG-----NVVEAEWESD 258
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+V +A ++M+ K G + ++ VF+ + +W A+++ALA+HG + F+ M +
Sbjct: 259 TMVANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPS 318
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
+ V D T + L+ C + G+ + S + +E + +V M R G L
Sbjct: 319 E-VAVDKTTLVIALSTCAAPESLEDGKSI-HSRVARLGLETDVVAGTALVTMYSRCGDLG 376
Query: 512 EAEELVGQIPG 522
EA + I G
Sbjct: 377 EARRVFDGILG 387
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 208/647 (32%), Positives = 342/647 (52%), Gaps = 26/647 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLN-NPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVF 55
+N+Y A +F N++ D+ WN+++SG+ K+ D F +N V
Sbjct: 45 INVYFACKDHCSARLVFENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVP 104
Query: 56 DAVTYSTALSF--CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
D+ TY + L E G +H+++VK G +V V ++L+ MY+++ ++ +
Sbjct: 105 DSFTYPNVIKAYGALGRE--FLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQ 162
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHE 172
VFDEMP +D SWN ++S + Q GD E L L M R + VS T A SAC
Sbjct: 163 VFDEMPERDVASWNTVISSFYQRGD--AEKALELFGRMERSDFEPNSVSITVAISACSRL 220
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
LE GK+IH +K + V + L+ Y +C+ A +VF++M +++++W +MI
Sbjct: 221 LCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMI 280
Query: 233 S--MNREDA---VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ R D+ V L M ++G P+ T ++ A S + G+ +HG I++
Sbjct: 281 RGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVD 340
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
++ + LI +Y + ++ +E VF + + SWN +ISGY G AV + +
Sbjct: 341 ADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQM 400
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ +P+ TF SVL+ ++ +L+ G++ H I + L++D ++ SALLDMY K G
Sbjct: 401 VSVGVQPDIVTFTSVLST--CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCG 458
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
++ E+ R+FN +K +WT +ISA HG + F EM+ GV+PD +TFL+VL+
Sbjct: 459 NVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLS 518
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP-GGPG 525
CG G+I +G F M Y IE S + YSC++D+LGR GRL EA ++ Q P
Sbjct: 519 ACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQKPETRDN 578
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+L +L AC +H + +G IA L++ P + +Y ++ NLYA W+ +R
Sbjct: 579 AELLSTLFCACCLHRDHLLGYTIAKLLVEKYPDDASTYTVLFNLYASGESWDAAKRVRLK 638
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLG 632
MK G+RK+ G SW ++ + + F + D +HP++E +Y ECL
Sbjct: 639 MKEVGMRKKPGCSWIEMN--EKVCHFFAEDRSHPQAENVY---ECLA 680
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 133/268 (49%), Gaps = 10/268 (3%)
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
+ L+ + +++ +++H + S+ +C LI +Y + + VF+ +
Sbjct: 6 LLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENID 65
Query: 318 CR-EIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLK 374
R ++ WN+L+SGY++N + ++ F ++ P+++T+ +V+ A GA L
Sbjct: 66 IRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFL- 124
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G+ H+ ++K G D +V S+L+ MY K +S +VF+E E+ +W +IS+
Sbjct: 125 -GRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFY 183
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
+ GD E + F ME P+S++ ++ C R + +G+ + LK E
Sbjct: 184 QRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKK---EFEL 240
Query: 495 DHY--SCMVDMLGRVGRLEEAEELVGQI 520
D Y S +VDM GR LE A E+ Q+
Sbjct: 241 DEYVNSALVDMYGRCDFLEMAREVFQQM 268
>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 913
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 214/645 (33%), Positives = 337/645 (52%), Gaps = 31/645 (4%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYST 62
KSG+ AL +F+ + ++V+W T +SG ++ + A + M GV + +
Sbjct: 82 KSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNA 141
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
AL+ C G Q+HSL V+ G ++ ++G+ LI +YSR G L A VF M D
Sbjct: 142 ALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPD 201
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
V + +++S ++G+ A+ L +M R+GL+ + + TS + C +G+QIH
Sbjct: 202 VVGYTSLVSALCRNGELA-RAVDVLCQMTRQGLQPNEHTMTSMLAECPRG----IGEQIH 256
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NRE 237
G +K+ V L+ YS+ G A VF + +NV+SW +M+ + +
Sbjct: 257 GYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLD 316
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
DA+ +F EM +GV PN+ F A+S V GR IH IK + +++ V N L+
Sbjct: 317 DALRVFSEMISEGVQPNEFAFS---IALSACGSVCLGRQIHCSAIKRDLMTDIRVSNALL 373
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
+MY R + + E V ++ +++SW A IS QNG S AV + E PN Y
Sbjct: 374 SMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDY 433
Query: 357 TFGSVLNAVGAAEDISLKH-GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
F S L++ D++L H G++ H +K+G D G+AL++MY K G I ++ F
Sbjct: 434 AFSSGLSSCA---DLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAF 490
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ +W ++I LA+HGD + F EM + RPD TFLSVL C G++
Sbjct: 491 DVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVK 550
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
+G F M Y + P+P HY+CM+DMLGR GR EA ++ +P P + + ++LL +
Sbjct: 551 EGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLAS 610
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
C++H N+++G+ AD LM++ S SYVLMSNLYA +W +R+ M GV+K+
Sbjct: 611 CKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDA 670
Query: 596 GFSWADVGD-------IDGLHGFSSGDNTHPRSEEIYRMA-ECLG 632
G+SW +V + + FSSG T ++ IY CLG
Sbjct: 671 GWSWIEVKNEVEAARFVHQKFRFSSG--TEGVTDSIYSCPGSCLG 713
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 165/339 (48%), Gaps = 14/339 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y + G F A +F NL + ++VSW +++ + DDAL M GV +
Sbjct: 275 IDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNE 334
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+S ALS C G Q+H +K L +++ V NAL++MY R G + E V +
Sbjct: 335 FAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGK 391
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ N D VSW A +S Q+G + +A+ L++M +G + +F+S S+C L
Sbjct: 392 IENPDLVSWTAAISANFQNG-FSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQ 450
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+Q+H +++K+G V GN L++ YSKC G A F M +V+SW ++I +
Sbjct: 451 GRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQ 510
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR-MIHGLCIKTNFLSEPS 291
A+ F EM P+D TF+ ++ + LVKEG + + PS
Sbjct: 511 HGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPS 570
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALIS 329
C+I M R ++ ++ + + +++ W L++
Sbjct: 571 HYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLA 609
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D ++ LD K G + ++ +F+ K+ AWT IS R+G E+ F +M
Sbjct: 69 DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVG 508
GV P+ + L C G + G + ++ + D + SC++++ R G
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGF---AADAWIGSCLIELYSRCG 185
Query: 509 RLEEAEELVGQIPGGPGLSVLQSLLGA-CRIHGNVEMGERIADALMKMEPAG 559
L AEE+ ++ P + SL+ A CR N E+ R D L +M G
Sbjct: 186 SLRAAEEVFRRME-APDVVGYTSLVSALCR---NGELA-RAVDVLCQMTRQG 232
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 193/615 (31%), Positives = 333/615 (54%), Gaps = 19/615 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVL-SGFEKSDDALSFALRMNLI----GVVFDA 57
MY K G + A+ +F+ + ++VSWN+V+ + E S+ L L+ G++ D
Sbjct: 240 MYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDV 299
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T T + C G+ H L +K GL E+ V ++L+ MYS+ G L EAR +FD
Sbjct: 300 ATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD- 358
Query: 118 MPNKDSVSWNAILSGYTQDGDY-GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
K+ +SWN+++ GY++D D+ G +L ++M K ++++ V+ + C E
Sbjct: 359 TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDK-VKVNEVTLLNVLPVCEEEIQFL 417
Query: 177 LGKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
K+IHG +++ G+ + V N ++ Y+KC A VF M + V SW +I +
Sbjct: 418 KLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGH 477
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++ A+ L+ MR G+ P+ T L+ A + + G+ IHG ++ F +
Sbjct: 478 VQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDE 537
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+C L+++Y + + ++ FD + + ++ WN +I+G++QN A+ F ++
Sbjct: 538 FICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSS 597
Query: 351 SK-PNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
P+ S++ A+GA +S L+ G+ H +K L V +L+DMY K G +
Sbjct: 598 KIWPDEI---SIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCM 654
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+SQ +F+ K E W +I+ HG + FK M+N G RPDS+TF+++LT C
Sbjct: 655 EQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTAC 714
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +G M + I+P +HY+C+VDMLGR GRL EA ELV ++P P +
Sbjct: 715 NHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRI 774
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
SLL +CR + ++++GE++A+ L+++ P + +YVL+SN YA G W+ V +R+ MK
Sbjct: 775 WSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKE 834
Query: 589 KGVRKEVGFSWADVG 603
G++K+ G SW ++G
Sbjct: 835 IGLQKDAGCSWIEIG 849
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/569 (26%), Positives = 283/569 (49%), Gaps = 34/569 (5%)
Query: 10 FDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVFDAVTYSTALS 65
+D L +FN ++ WN +LSG+ ++ D F ++L V D T +
Sbjct: 146 YDSCL-VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIK 204
Query: 66 FCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVS 125
C+ G +H +K + S+V+VGNALI MY ++G + A +VFD+MP ++ VS
Sbjct: 205 ACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVS 264
Query: 126 WNAILSGYTQDGDYGVEAILALIEMM---RKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
WN+++ ++G + E L + + +GL D + + C + + LG H
Sbjct: 265 WNSVMYACLENGVF--EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFH 322
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED---- 238
G+++K+G + V + L+ YSKC +A +F +++NVISW +MI +D
Sbjct: 323 GLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYSKDRDFR 381
Query: 239 -AVSLFKEMRL-DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL-SEPSVCNC 295
A L ++M++ D V N+VT + ++ + + IHG ++ F+ S+ V N
Sbjct: 382 GAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANA 441
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KP 353
+ YA+ S+ +E VF + + + SWNALI G+ QNG A+ + +++ S +P
Sbjct: 442 FVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYL-LMRGSGLEP 500
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ +T S+L+A + SL G+ H +++ G + D + +L+ +Y + G I ++
Sbjct: 501 DLFTIASLLSACARLK--SLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKL 558
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
F+ +EK+ W +I+ +++ ++ F +M + + PD I+ + L C +
Sbjct: 559 FFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSA 618
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSC-MVDMLGRVGRLEEAEELVGQI--PGGPGLSVLQ 530
+ G+ L +K + E S +C ++DM + G +E+++ + ++ G +VL
Sbjct: 619 LRLGKELHCFAVKSHLTEHS--FVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLI 676
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAG 559
+ G IHG+ G + + M+ AG
Sbjct: 677 TGYG---IHGH---GRKAIELFKSMQNAG 699
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 213/436 (48%), Gaps = 16/436 (3%)
Query: 64 LSFCLDHEGFLFGLQLHSLI-VKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
L C +++ G ++H+ I ++V + L+TMYS ++ VF+ K+
Sbjct: 100 LQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKN 159
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQI 181
WNA+LSGY ++ + +A+ +EM+ D+ + AC ++ LG+ +
Sbjct: 160 LFLWNALLSGYLRNSLFR-DAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAV- 240
HG ++K + V VGN L++ Y K A KVF +M RN++SW +++ E+ V
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278
Query: 241 ----SLFKEMRL--DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
LFK + +G+ P+ T + +I + V+ G + HGL +K E V +
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNS 338
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--K 352
L+ MY++ + ++ +FD + + +ISWN++I GY+++ A + + E K
Sbjct: 339 SLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVK 397
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFES 411
N T +VL E+I + H + ++ G + SD +V +A + Y K GS+ +
Sbjct: 398 VNEVTLLNVLPV--CEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYA 455
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VF + K +W A+I ++G ++ + M G+ PD T S+L+ C R
Sbjct: 456 EGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARL 515
Query: 472 GMIHKGRHLFDSMLKD 487
+ G+ + SML++
Sbjct: 516 KSLSCGKEIHGSMLRN 531
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 128/251 (50%), Gaps = 8/251 (3%)
Query: 271 VKEGRMIHG-LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALIS 329
++ GR IH + +F ++ + L+TMY+ +S DS VF+ + + WNAL+S
Sbjct: 109 IEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLS 168
Query: 330 GYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
GY +N L AV F +I E P+ +T V+ A D+ L G+ H +K
Sbjct: 169 GYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRL--GEAVHGFALKTK 226
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+ SD VG+AL+ MYGK G + + +VF++ +++ +W +++ A +G +E FK
Sbjct: 227 VLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFK 286
Query: 448 EMEN--KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLG 505
+ N +G+ PD T ++V+ +C R G + G +F + + S ++DM
Sbjct: 287 GLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLALKLGLCGELKVNSSLLDMYS 345
Query: 506 RVGRLEEAEEL 516
+ G L EA L
Sbjct: 346 KCGYLCEARVL 356
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 4/174 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++Y + G+ A F+N+ ++V WNT+++GF +++ DAL +M + D
Sbjct: 544 VSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDE 603
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ AL C G +LH VK L +V +LI MY++ G + +++ +FD
Sbjct: 604 ISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDR 663
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+ K V+WN +++GY G +G +AI M G R D V+F + +AC H
Sbjct: 664 VHLKGEVTWNVLITGYGIHG-HGRKAIELFKSMQNAGFRPDSVTFIALLTACNH 716
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 329/623 (52%), Gaps = 18/623 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y G+ A +F+ + D+VSWN+++S F + DA + M G + +
Sbjct: 164 YAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASL 223
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ + C + FGL +H+L VK GL++ V + NAL+ MY ++G + + +VFD M
Sbjct: 224 VSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLE 283
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
++ VSWN+ + + G YG + + +M + ++ +S A + +LG++
Sbjct: 284 QNEVSWNSAIGCFLNAGFYG-DVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGRE 342
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----N 235
+HG SIK + V N L+ Y+K A+ +F +M DRNV+SW MI+
Sbjct: 343 VHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGA 402
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
+A L +M+ G CPN +T + ++ A + +K G+ IH I+ + + + N
Sbjct: 403 ETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNA 462
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNA 355
LI MY++ + + +F E S ++ +S+N LI GY+Q+ ++ F K+ +
Sbjct: 463 LIDMYSKCGQLSLARNIF-ERSEKDDVSYNTLILGYSQSPWCFESLLLF----KQMRSVG 517
Query: 356 YTFGSV--LNAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
+ +V + A+ A ++S+ KHG+ H +++ L P + ++LLD+Y K G + +
Sbjct: 518 IDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTAS 577
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
++FN+ +K +W +I HG + F+ M+ G+ D +++++VL C G
Sbjct: 578 KIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGG 637
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ KG+ F M+ +IEP HY+CMVD+LGR G+L + E++ +P V +L
Sbjct: 638 LVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGAL 696
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
LGACRIHGN+E+ + A+ L +++P SG Y LM N+YAE G W +RK MKS+ V+
Sbjct: 697 LGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQ 756
Query: 593 KEVGFSWADVGDIDGLHGFSSGD 615
K +SW D + L F GD
Sbjct: 757 KNPAYSWVQDQDGNKLQAFLVGD 779
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 150/489 (30%), Positives = 262/489 (53%), Gaps = 21/489 (4%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
GL+LH+ ++ G ++V+ GN L+ Y+ G+ +ARRVFDEMP +D VSWN+++S +
Sbjct: 138 GLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLV 197
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+G + +A AL+ MMR G L+ S S ACG E+ + G IH +++K+G T V+
Sbjct: 198 NGMFH-DARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVN 256
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNR---EDAVSLFKEMRLDG 250
+ N L+ Y K + +VF M ++N +SW + I +N D + +F++M
Sbjct: 257 LANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHN 316
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V P +T L+ A+ GR +HG IK + V N L+ MYA+F S++ +
Sbjct: 317 VMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKAS 376
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK----PNAYTFGSVLNAVG 366
+F+++ R ++SWNA+I+ QNG A +AF V K PN+ T +VL A
Sbjct: 377 TIFEQMKDRNVVSWNAMIANLVQNG---AETEAFRLVTDMQKSGECPNSITLVNVLPA-- 431
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
A SLK G++ H+ I+ GL D + +AL+DMY K G + ++ +F E EK + ++
Sbjct: 432 CARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIF-ERSEKDDVSY 490
Query: 427 TAIISALARHG-DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
+I ++ +ES++ FK+M + G+ D+++F+ L+ C + G+ + ++
Sbjct: 491 NTLILGYSQSPWCFESLL-LFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLV 549
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+ + P + ++D+ + G L A ++ +I S +LG +HG +++
Sbjct: 550 RRL-LSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYG-MHGQIDIA 607
Query: 546 ERIADALMK 554
+ + LMK
Sbjct: 608 FELFE-LMK 615
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 257/526 (48%), Gaps = 51/526 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + ++ +F+ + + VSWN+ + F + D L +M+ V+ +
Sbjct: 262 VDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGS 321
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T S+ L ++ F G ++H +K +D +++V N+L+ MY+++G L +A +F++
Sbjct: 322 ITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQ 381
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +++ VSWNA+++ Q+G EA + +M + G + ++ + AC +L++
Sbjct: 382 MKDRNVVSWNAMIANLVQNGA-ETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKM 440
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GKQIH SI+ G + + N L+ YSKC A +F R +++ +S+ T+I +
Sbjct: 441 GKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQ 499
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+++ LFK+MR G+ + V+F+G + A + ++ K G+ IH + ++ P +
Sbjct: 500 SPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFL 559
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ +Y + + + K+F++++ +++ SWN +I GY +G A + F ++K
Sbjct: 560 SNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFE-LFELMKGDG 618
Query: 353 PNAYTFGSVLNAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ Y S + + A L G++ S ++ ++ + + ++D+ G+ G + +
Sbjct: 619 LD-YDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKC 677
Query: 412 QRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ + + W A++ A HG+ E + Q+
Sbjct: 678 AEIIRDMPFPANSDVWGALLGACRIHGNIE--LAQW------------------------ 711
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
HLF+ LK H +Y+ M++M GR EA ++
Sbjct: 712 -----AAEHLFE--LKPEH----SGYYTLMINMYAETGRWNEANKI 746
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 209/453 (46%), Gaps = 32/453 (7%)
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK--DSVSWNAILSGYTQDGDYG 140
+V L + + + AL+ Y+ L AR V P + + WN++ +
Sbjct: 40 LVSGALATSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASLPS 99
Query: 141 VEAILALIEMMRKGLRLDHVSFT------SAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
EA+ M+R +R D +F +AA A +K LEL H +++ G+ V
Sbjct: 100 -EALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLEL----HASALRRGHLADV 154
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLD 249
GN L++ Y+ C DA +VF M +R+V+SW +++S DA M
Sbjct: 155 FTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRS 214
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
G N + + ++ A K G IH L +K + ++ N L+ MY +F ++ S
Sbjct: 215 GFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEAS 274
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
+VFD + + +SWN+ I + G ++ F + + + P + T S+L A+
Sbjct: 275 MQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPAL--V 332
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
E S G+ H + IK +D D V ++L+DMY K GS+ ++ +F + ++++ +W A
Sbjct: 333 ELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNA 392
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF-----DS 483
+I+ L ++G +M+ G P+SIT ++VL C R + G+ +
Sbjct: 393 MIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRG 452
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
++ D I + ++DM + G+L A +
Sbjct: 453 LMFDLFIS------NALIDMYSKCGQLSLARNI 479
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 167/357 (46%), Gaps = 22/357 (6%)
Query: 179 KQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRR--MHDRNVISWTTMISMN 235
++ H S+ G T + + L+ +Y+ A V R + R+ W ++
Sbjct: 33 RRAHAASLVSGALATSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRAL 92
Query: 236 R-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE--GRMIHGLCIKTNFLS 288
+A+ ++ M V P+D TF +HA + E G +H ++ L+
Sbjct: 93 SSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLA 152
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ N L+ YA D+ +VFDE+ R+++SWN+L+S + NG+ A +A ++
Sbjct: 153 DVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMM 212
Query: 349 KESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ P N + SV+ A G ++ K G H+ +KVGL++ + +AL+DMYGK G
Sbjct: 213 RSGFPLNVASLVSVVPACGTEQEE--KFGLSIHALAVKVGLNTMVNLANALVDMYGKFGD 270
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ S +VF+ E++E +W + I G Y V+ F++M V P SIT S+L
Sbjct: 271 VEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPA 330
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDH----YSCMVDMLGRVGRLEEAEELVGQI 520
G GR + Y I+ + D + +VDM + G LE+A + Q+
Sbjct: 331 LVELGSFDLGRE-----VHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQM 382
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 197/650 (30%), Positives = 348/650 (53%), Gaps = 24/650 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVV---FD 56
+Y + A +F + WN +L + K + LS +MN V D
Sbjct: 45 LYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPD 104
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T S AL C + G +H + K +DS+++VG+ALI +YS+ G++ +A +VF
Sbjct: 105 NYTVSIALKSCSGLQKLELGKMIHGFLKK-KIDSDMFVGSALIELYSKCGQMNDAVKVFT 163
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM--RKGLRLDHVSFTSAASACGHEKN 174
E P D V W +I++GY Q+G E LA M + + D V+ SAASAC +
Sbjct: 164 EYPKPDVVLWTSIITGYEQNG--SPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSD 221
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
LG+ +HG + G+ T + + N +++ Y K A +FR M +++ISW++M++
Sbjct: 222 FNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVAC 281
Query: 235 NRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++ A++LF EM + N VT I + A + + ++EG+ IH L + F +
Sbjct: 282 YADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELD 341
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+V L+ MY + S +++ ++F+ + ++++SW L SGYA+ G++ ++ F ++
Sbjct: 342 ITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLS 401
Query: 350 E-SKPNAYTFGSVLNAVGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGS 407
++P+A +L A+ ++ + C H+ + K G D++ +G++L+++Y K S
Sbjct: 402 NGTRPDAIALVKIL---AASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSS 458
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLSVLT 466
I + +VF + W++II+A HG E + +M N V+P+ +TF+S+L+
Sbjct: 459 IDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILS 518
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G+I +G +F M+ +Y + P+ +HY MVD+LGR+G L++A +++ +P G
Sbjct: 519 ACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGP 578
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +LLGACRIH N+++GE A L ++P +G Y L+SN+Y +W A LR +
Sbjct: 579 HVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLI 638
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
K ++K VG S ++ + +H F + D H S++IY M L + M+
Sbjct: 639 KENRLKKIVGQSMVEIK--NEVHSFIASDRFHGESDQIYEMLRKLDARMR 686
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 203/379 (53%), Gaps = 12/379 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLI-GVVFD 56
+ +Y K GQ + A+ +F PD+V W ++++G+E++ + AL+F RM ++ V D
Sbjct: 146 IELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPD 205
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT +A S C F G +H + + G D+++ + N+++ +Y + G + A +F
Sbjct: 206 PVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFR 265
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
EMP KD +SW+++++ Y +G A+ EM+ K + L+ V+ SA AC NLE
Sbjct: 266 EMPYKDIISWSSMVACYADNGA-ETNALNLFNEMIDKRIELNRVTVISALRACASSSNLE 324
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
GKQIH +++ G+ ++V LM Y KC +A ++F RM ++V+SW + S
Sbjct: 325 EGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYA 384
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E ++ +F M +G P+ + + ++ A S +V++ +H K+ F +
Sbjct: 385 EIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEF 444
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ LI +YA+ S+ ++ KVF L ++++W+++I+ Y +G A++ + S
Sbjct: 445 IGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHS 504
Query: 352 --KPNAYTFGSVLNAVGAA 368
KPN TF S+L+A A
Sbjct: 505 DVKPNDVTFVSILSACSHA 523
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 149/536 (27%), Positives = 249/536 (46%), Gaps = 55/536 (10%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLHS +K GL + +V L +Y+R+ L A ++F+E P K WNA+L Y +G
Sbjct: 22 QLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81
Query: 138 DYGVEAILALIEMMRKGL---RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
+ VE + +M + R D+ + + A +C + LELGK IHG +K + +
Sbjct: 82 KW-VETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDM 139
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEM-RL 248
VG+ L+ YSKC DA KVF +V+ WT++I+ ++ A++ F M L
Sbjct: 140 FVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVL 199
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
+ V P+ VT + A + + GR +HG + F ++ + N ++ +Y + S++
Sbjct: 200 EQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRI 259
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGA 367
+ +F E+ ++IISW+++++ YA NG A+ F +I K + N T S L A +
Sbjct: 260 AANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACAS 319
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
+ + L+ G++ H + G + D V +AL+DMY K S + +FN +K +W
Sbjct: 320 SSN--LEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWA 377
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL------- 480
+ S A G + F M + G RPD+I + +L G++ + L
Sbjct: 378 VLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKS 437
Query: 481 -FD-------SMLKDYHIEPSPDH---------------YSCMVDMLGRVGRLEEAEELV 517
FD S+++ Y S D+ +S ++ G G+ EEA +L
Sbjct: 438 GFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLS 497
Query: 518 GQIPG----GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNL 569
Q+ P S+L AC G +E G +KM Y LM N+
Sbjct: 498 HQMSNHSDVKPNDVTFVSILSACSHAGLIEEG-------IKMFHVMVNEYQLMPNI 546
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 182/492 (36%), Positives = 287/492 (58%), Gaps = 12/492 (2%)
Query: 153 KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD 212
+GL ++ + S + C + + G+++H IK Y V + L+ Y+KC GD
Sbjct: 4 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63
Query: 213 ANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISI 267
A +V M +RNV+SWT MIS + +A+ LF EM + G PN+ TF ++ + +
Sbjct: 64 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
+ + GR IH L IKT+F S V + L+ MYA+ + ++ +VFD L R+++S A+
Sbjct: 124 SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI 183
Query: 328 ISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
ISGYAQ GL A+ F + +E + N T+ SVL A+ +L HG++ HSH+++
Sbjct: 184 ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLA--ALDHGRQVHSHVLRA 241
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
L ++ ++L+DMY K GS+ S+R+F+ E++ +W A++ ++HG + F
Sbjct: 242 KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELF 301
Query: 447 KEM-ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH-IEPSPDHYSCMVDML 504
K M E V+PDS+TFL+VL+ C GM +G +F M+ EP +HY C+VD+
Sbjct: 302 KLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLF 361
Query: 505 GRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYV 564
GR GR+EEA E + ++P P ++ SLLGACR+H NV +GE +A L+++E +G+YV
Sbjct: 362 GRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYV 421
Query: 565 LMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
++SNLYA G W+ V +R+ MK K V KE G SW ++ LH F + D +HPR EE+
Sbjct: 422 ILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQT--LHTFHASDRSHPRKEEV 479
Query: 625 YRMAECLGSEMK 636
+ L ++K
Sbjct: 480 FAKVRELSIKIK 491
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 224/419 (53%), Gaps = 18/419 (4%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
M + G+ + Y + L+ C+ G ++H+ ++K + VY+ LI +Y++
Sbjct: 1 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
L +ARRV DEMP ++ VSW A++SGY+Q G Y EA+ +EM+ G + +F + +
Sbjct: 61 LGDARRVLDEMPERNVVSWTAMISGYSQRG-YASEALHLFVEMLMSGTAPNEFTFATVLT 119
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
+C +LG+QIH + IK + +H+ VG+ L+ Y+K +A +VF + +R+V+S
Sbjct: 120 SCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVS 179
Query: 228 WTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
T +IS E+A+ LF+ ++ +G+ N VT+ ++ A+S + GR +H +
Sbjct: 180 CTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVL 239
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
+ + N LI MY++ S+ S ++FD + R +ISWNA++ GY+++GL AV+
Sbjct: 240 RAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVE 299
Query: 343 AFFGVIKES---KPNAYTFGSVLNAV--GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
F ++KE KP++ TF +VL+ G ED L+ + K G + +
Sbjct: 300 -LFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQ--KDGFEPEIEHYGC 356
Query: 398 LLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDY---ESVMNQFKEMENK 452
++D++G+ G + E+ + E + W +++ A H + E V + E+E++
Sbjct: 357 VVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESE 415
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 167/312 (53%), Gaps = 14/312 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
+Y K A + + + ++VSW ++SG+ + + +AL + M + G + T
Sbjct: 54 LYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFT 113
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++T L+ C GF G Q+HSL++K +S ++VG++L+ MY++ G++ EARRVFD +P
Sbjct: 114 FATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D VS AI+SGY Q G EA+ + R+G+R ++V++ S +A L+ G+
Sbjct: 174 ERDVVSCTAIISGYAQLG-LDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGR 232
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI------S 233
Q+H ++ +V + N L+ YSKC + ++F M +R VISW M+
Sbjct: 233 QVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHG 292
Query: 234 MNREDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI--KTNFLSEP 290
+ RE AV LFK M+ + V P+ VTF+ ++ S G + G I + K F E
Sbjct: 293 LGRE-AVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEI 351
Query: 291 SVCNCLITMYAR 302
C++ ++ R
Sbjct: 352 EHYGCVVDLFGR 363
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 102/176 (57%), Gaps = 7/176 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K+G+ +A +F+ L D+VS ++SG+ + ++AL R+ G+ +
Sbjct: 153 LDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNY 212
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY++ L+ G Q+HS +++ L V + N+LI MYS+ G L +RR+FD
Sbjct: 213 VTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDS 272
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGH 171
MP + +SWNA+L GY++ G G EA+ L ++M++ ++ D V+F + S C H
Sbjct: 273 MPERTVISWNAMLVGYSKHG-LGREAV-ELFKLMKEENKVKPDSVTFLAVLSGCSH 326
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----SDDALSFALRMNLIGVVFD 56
++MY K G + IF+++ ++SWN +L G+ K + F L V D
Sbjct: 254 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 313
Query: 57 AVTYSTALSFCLDHEGFL-FGLQLHSLIV--KFGLDSEVYVGNALITMYSRWGRLVEARR 113
+VT+ LS C H G GL++ +V K G + E+ ++ ++ R GR+ EA
Sbjct: 314 SVTFLAVLSGC-SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFE 372
Query: 114 VFDEMPNKDSVS-WNAIL 130
+MP + + + W ++L
Sbjct: 373 FIKKMPFEPTAAIWGSLL 390
>gi|15229605|ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49740
gi|6723419|emb|CAB66912.1| putative protein [Arabidopsis thaliana]
gi|332645063|gb|AEE78584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 737
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 200/614 (32%), Positives = 348/614 (56%), Gaps = 34/614 (5%)
Query: 6 KSGQFDKALCIFNNL-NNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYS 61
K G + A +F+ + D+ WN +++G ++S + ++ M+ +GV D ++
Sbjct: 135 KLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFA 194
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE--MP 119
T LS C D+ FG Q+HSL++K G V NALITMY +V+A VF+E +
Sbjct: 195 TILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVA 253
Query: 120 NKDSVSWNAI---LSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+D V++N + L+G+ +D E++L +M+ LR ++F S +C
Sbjct: 254 VRDQVTFNVVIDGLAGFKRD-----ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA--- 305
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
+G Q+HG++IK GY + V N M+ YS E G A+KVF + ++++++W TMIS
Sbjct: 306 MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYN 365
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ A+S++K M + GV P++ TF G + A S+ V E M+ IK S+
Sbjct: 366 QAKLGKSAMSVYKRMHIIGVKPDEFTF-GSLLATSLDLDVLE--MVQACIIKFGLSSKIE 422
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ N LI+ Y++ ++ ++ +F+ + +ISWNA+ISG+ NG ++ F +++
Sbjct: 423 ISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESE 482
Query: 352 K---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
P+AYT ++L+ + + L G + H+++++ G + ++G+AL++MY + G+I
Sbjct: 483 VRILPDAYTLSTLLSICVSTSSLML--GSQTHAYVLRHGQFKETLIGNALINMYSQCGTI 540
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLSVLTV 467
S VFN+ EK +W ++ISA +RHG+ E+ +N +K M+++G V PD+ TF +VL+
Sbjct: 541 QNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSA 600
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV--GQIPGGPG 525
C G++ +G +F+SM++ + + + DH+SC+VD+LGR G L+EAE LV + G
Sbjct: 601 CSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSR 660
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ V +L AC HG++++G+ +A LM+ E YV +SN+YA G W+ R+
Sbjct: 661 VDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRA 720
Query: 586 MKSKGVRKEVGFSW 599
+ G K+ G SW
Sbjct: 721 INMIGAMKQRGCSW 734
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 160/598 (26%), Positives = 283/598 (47%), Gaps = 65/598 (10%)
Query: 12 KALCIFNNL-----NNPDIVSWNTVLSGFEKSDD---ALS-FALRMNLIGVVFDAVTYST 62
KALC+ +L N+ +++ N L+G +S + AL FA + D + S
Sbjct: 3 KALCLTESLSAIAENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSL 62
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR--------- 113
A++ +FG Q+H ++ GL +V N L+++Y R G L ++
Sbjct: 63 AITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPD 122
Query: 114 ----------------------VFDEMPNKDSVS-WNAILSGYTQDGDYGVEAILALIEM 150
VFD+MP +D V+ WNA+++G + G Y ++ EM
Sbjct: 123 VYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESG-YHETSVELFREM 181
Query: 151 MRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
+ G+R D F + S C + +L+ GKQ+H + IK G+ SV N L++ Y C+V
Sbjct: 182 HKLGVRHDKFGFATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVV 240
Query: 211 GDANKVFRR--MHDRNVISWTTMIS----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
DA VF + R+ +++ +I R++++ +F++M + P D+TF+ ++ +
Sbjct: 241 VDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGS 300
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
S + G +HGL IKT + V N +TMY+ FE + KVF+ L +++++W
Sbjct: 301 CSCAAM---GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTW 357
Query: 325 NALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
N +IS Y Q L +A+ + + I KP+ +TFGS+L A + L + + I
Sbjct: 358 NTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL-----ATSLDLDVLEMVQACI 412
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
IK GL S + +AL+ Y K G I ++ +F + K+ +W AIIS +G +
Sbjct: 413 IKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGL 472
Query: 444 NQFKEMENKGVR--PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+F + VR PD+ T ++L++C + G +L+ + + + ++
Sbjct: 473 ERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIG-NALI 531
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+M + G ++ + E+ Q+ +S SL+ A HG GE + M+ G
Sbjct: 532 NMYSQCGTIQNSLEVFNQMSEKDVVS-WNSLISAYSRHGE---GENAVNTYKTMQDEG 585
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 196/379 (51%), Gaps = 33/379 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M MY F A +F +L D+V+WNT++S + ++ A+S RM++IGV D
Sbjct: 330 MTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDE 389
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L+ LD + + + I+KFGL S++ + NALI+ YS+ G++ +A +F+
Sbjct: 390 FTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFER 446
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL--DHVSFTSAASACGHEKNL 175
K+ +SWNAI+SG+ +G + E + ++ +R+ D + ++ S C +L
Sbjct: 447 SLRKNLISWNAIISGFYHNG-FPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSL 505
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
LG Q H ++ G +GN L++ YS+C ++ +VF +M +++V+SW ++IS
Sbjct: 506 MLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAY 565
Query: 236 R-----EDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMI-------HGLCI 282
E+AV+ +K M+ +G V P+ TF ++ A S LV+EG I HG+
Sbjct: 566 SRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIR 625
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSE---KVFDELSCREIISWNALISGYAQNG-LSL 338
+ S CL+ + R + ++E K+ ++ + W AL S A +G L L
Sbjct: 626 NVDHFS------CLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKL 679
Query: 339 AAVQAFFGVIKES-KPNAY 356
+ A + KE P+ Y
Sbjct: 680 GKMVAKLLMEKEKDDPSVY 698
>gi|302766239|ref|XP_002966540.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
gi|300165960|gb|EFJ32567.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
Length = 630
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/596 (30%), Positives = 337/596 (56%), Gaps = 25/596 (4%)
Query: 1 MNMYCKSG---QFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVV 54
+ MY K G A +F+ + D+VSW+ +++ + ++ +A++ RM+ V
Sbjct: 41 IQMYRKCGGTSSLADARAVFDQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRMD---VE 97
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ + + L+ C + G+ +H+ I+ L V+VG AL+ MY++ G + +AR V
Sbjct: 98 PNEMVIVSTLAACSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAV 157
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD++P+KD VSW A+++ + Q GD +A+ L M++ ++ + V+F +A +AC +
Sbjct: 158 FDQIPHKDVVSWTAMITAFAQMGDCR-QALETLEGMIQARVQPNPVTFVAAITACSSREF 216
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L+ G++IH I +G +++ N L+S Y+K +A VF+RM DRN +SW +MI
Sbjct: 217 LDRGRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAA 276
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
S A+ LF M L+G+ P+DV+F+G++ A S ++ + IH S
Sbjct: 277 FAASAQSCAAMGLFHGMNLEGIKPDDVSFLGVLSACSSTRCLRSCKRIHSQLELAAVHSP 336
Query: 290 P--SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
P SV N L+T YA+ ++ +E++F + + ++SW A+++ Y +G A++ + +
Sbjct: 337 PDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKM 396
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ +S +P++ +V+ A D+ L ++ H+ + + +AL++MY + G
Sbjct: 397 VGQSIQPDSVVLLNVIYAGSLVGDVGL--ARKLHARVASSSFMLKIQIQNALINMYTRCG 454
Query: 407 SIFESQRVFNETQEKSEFA-----WTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
S+ E++RVF+ + K+ A W+++++ A HG E + +++M +GV+PDS+T+
Sbjct: 455 SLEEARRVFDGIERKNLVARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPDSVTY 514
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+S+L C G++ + RH F SM++D+ + PDH+ CMVD+LGR G + AE++V +P
Sbjct: 515 VSILNSCSHAGLLAQARHFFVSMVEDHCLAAWPDHWKCMVDVLGRAGFVGRAEDVVRNMP 574
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
P + +LLG C++HG+ G A + + P +GS VL+SN+YAE G E
Sbjct: 575 FQPDVVAWNTLLGCCKVHGDARRGAVAARNAVGISPGFAGSTVLLSNMYAEIGRHE 630
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 234/474 (49%), Gaps = 29/474 (6%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWG---RLVEARRVF 115
Y++ L C G ++H I+ G V++GN LI MY + G L +AR VF
Sbjct: 1 YASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVF 60
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D+MP KD VSW+ I++ Y Q G + EAI R + + + S +AC K+L
Sbjct: 61 DQMPKKDVVSWSCIIAAYGQAG-HCREAINLF---QRMDVEPNEMVIVSTLAACSGAKDL 116
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
LG IH + V VG L++ Y+KC A VF ++ ++V+SWT MI+
Sbjct: 117 ALGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQIPHKDVVSWTAMITAF 176
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A+ + M V PN VTF+ I A S + GR IH I +
Sbjct: 177 AQMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDI 236
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
++ N L++MYA+ S +++ VF + R +SWN++I+ +A + S AA+ F G+ E
Sbjct: 237 TIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCAAMGLFHGMNLE 296
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP--IVGSALLDMYGKRGS 407
KP+ +F VL+A + L+ +R HS + + S P V ++L+ Y K G
Sbjct: 297 GIKPDDVSFLGVLSACSSTR--CLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGD 354
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL-- 465
+ ++R+F K+ +WTA+++A HG+ + + +M + ++PDS+ L+V+
Sbjct: 355 LEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYA 414
Query: 466 -TVCGRNGMIHK--GRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
++ G G+ K R S + I+ + +++M R G LEEA +
Sbjct: 415 GSLVGDVGLARKLHARVASSSFMLKIQIQ------NALINMYTRCGSLEEARRV 462
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRG---SIFESQR 413
+ S+L G + SL G+R H HI+ G + +G+ L+ MY K G S+ +++
Sbjct: 1 YASLLRRCGISR--SLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARA 58
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN-- 471
VF++ +K +W+ II+A + G +N F+ M+ V P+ + +S L C
Sbjct: 59 VFDQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRMD---VEPNEMVIVSTLAACSGAKD 115
Query: 472 ---GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
GM R L + K + + +++M + G +E+A + QIP
Sbjct: 116 LALGMAIHARILSPDLRKSVFVG------TALLNMYAKCGAIEQARAVFDQIP 162
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 194/635 (30%), Positives = 342/635 (53%), Gaps = 19/635 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y K F A +F+ + + SW ++ G ++ D + + + + +V D
Sbjct: 108 YSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYAL 167
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S A+ C+ + + G +H+ ++ G S +V +L+ MY++ GR+ ++ +VF+ + N
Sbjct: 168 SAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLEN 227
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
++ VSWNA++SG+ +G Y EA + + M+ + +R + F S + A G ++E G+
Sbjct: 228 RNQVSWNAMISGFVSNGLYA-EAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRY 286
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS--WTTMISM---- 234
I+ ++ ++G +++ VG L+ ++KC ++ VF ++ W MIS
Sbjct: 287 INRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTIS 346
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ E+A+ LF M + + + T+ +++I+ ++ + +HG+ K+ + S+C
Sbjct: 347 GHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSIG-VSLC 405
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-- 351
N L+ YA+ + K+FD ISW L++ Y+Q+ A+ + F ++E
Sbjct: 406 NALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDAL-SVFSQMREMGF 464
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+PN TF VL + A SL++GQ+ HS K G D V S L+DMY K GS+ ++
Sbjct: 465 QPNQVTFSGVLAS--CASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDA 522
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+VF ++ +WTA+IS A+HG + + F++ME P+S TFL +L C
Sbjct: 523 IKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHG 582
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G F M + Y + P +HY+C+VD+LGRVGRL EA + + ++P P V +
Sbjct: 583 GLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWST 642
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGACR+HGN+++ + A ++ P + VL+SN Y E G+ E +R MKS+ +
Sbjct: 643 LLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNVRNMMKSQAM 702
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
RKE G SW +G +H F SGD HP+ ++IY+
Sbjct: 703 RKETGMSWICIG--GKIHKFCSGDQYHPQKDDIYK 735
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 148/483 (30%), Positives = 253/483 (52%), Gaps = 27/483 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRM---NLIGVV 54
+ MY K G+ + +FN+L N + VSWN ++SGF + +A + LRM + V
Sbjct: 206 LGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNV 265
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
++ S A+ D E G ++ + + G+ S ++VG ALI M+++ G + E+ V
Sbjct: 266 ACFISVSKAIGQLGDVEK---GRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSV 322
Query: 115 FDEMPNKDSVS--WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
F + V+ WNA++SG+T G +G EA+L + M + ++ D ++ S ++
Sbjct: 323 FVSNFSGCGVNLPWNAMISGFTISG-HGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADM 381
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
++LE KQ+HG+ K G VS+ N LM Y+KC K+F + N ISWTT++
Sbjct: 382 RSLEYVKQLHGMIWKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLV 440
Query: 233 -----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S EDA+S+F +MR G PN VTF G++ + + ++ G+ +H L KT F
Sbjct: 441 TAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFA 500
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ V + LI MYA+ S++D+ KVF+ L ++ISW A+ISGYAQ+G++ A++ F +
Sbjct: 501 RDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKM 560
Query: 348 -IKESKPNAYTFGSVLNAV--GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ PN+ TF +L A G D L++ H + GL + + ++D+ G+
Sbjct: 561 ELVLPNPNSATFLCLLFACSHGGLVDEGLRYF---HLMEERYGLVPEIEHYACVVDILGR 617
Query: 405 RGSIFESQR-VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
G + E+ + + E E W+ ++ A HG+ + + + + PD L
Sbjct: 618 VGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQ--LAKIAAQKVLSYNPDDFAALV 675
Query: 464 VLT 466
+L+
Sbjct: 676 LLS 678
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 223/450 (49%), Gaps = 25/450 (5%)
Query: 79 LHSLIVKFGL--DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
+H ++KF L S + N L+ YS+ AR+VFDE+P K SW ++ G T++
Sbjct: 83 IHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATEN 142
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G Y + I +E++ + D + ++A AC ++ +G+ +H I G+ + V
Sbjct: 143 GFYR-DGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFV 201
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGV 251
L+ Y+K GD+ KVF + +RN +SW MIS +A + F M + +
Sbjct: 202 NTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEI 261
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
PN FI + AI V++GR I+ + + S V LI M+A+ + +S
Sbjct: 262 RPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWS 321
Query: 312 VF--DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
VF + C + WNA+ISG+ +G A+ F + + + K + YT+ S LN++ A
Sbjct: 322 VFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSI--A 379
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+ SL++ ++ H I K G + +AL+D Y K G + +++F+ +E ++ +WT
Sbjct: 380 DMRSLEYVKQLHGMIWKSGSIGVSLC-NALMDAYAKCGELDAMRKLFDTWEESNQISWTT 438
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-- 486
+++A ++ ++E ++ F +M G +P+ +TF VL C + G+ + K
Sbjct: 439 LVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTG 498
Query: 487 ---DYHIEPSPDHYSCMVDMLGRVGRLEEA 513
D +E S ++DM + G + +A
Sbjct: 499 FARDKCVE------SVLIDMYAKCGSVRDA 522
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 219/653 (33%), Positives = 333/653 (50%), Gaps = 23/653 (3%)
Query: 1 MNMYCKSGQFDK-ALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVT 59
+N Y K+G FDK AL +F+ + + VS+ T+ G+ D + R++ G +
Sbjct: 91 LNAYVKAG-FDKDALNLFDEMPERNNVSYVTLTQGY-ACQDPVGLYSRLHREGHELNPHV 148
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+++ L + + LHS IVK G DS +VG ALI YS G + AR VF+ +
Sbjct: 149 FTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGIL 208
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
KD V W I+S Y ++G + +++ L M G ++ +F +A A K
Sbjct: 209 CKDIVVWAGIVSCYVENGCFE-DSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAK 267
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED- 238
+HG +K Y VG L+ Y++ DA KVF M +V+ W+ MI+ ++
Sbjct: 268 SVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNG 327
Query: 239 ----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
AV +F MR V PN+ T +++ +IG G +HGL +K F + V N
Sbjct: 328 FCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSN 387
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKP 353
LI +YA+ E M + K+F ELS + ++SWN +I GY G A+ F ++ +
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSV 447
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
TF S L A + + L G + H IK V ++L+DMY K G I +Q
Sbjct: 448 TEVTFSSALGACASLASMEL--GVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQT 505
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VFNE + +W A+IS + HG + F M+ +P+ +TFL VL+ C G+
Sbjct: 506 VFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGL 565
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
I +G+ F+SM+ D+ IEP +HY+CMV + GR G+L++A L+ IP P + + +++L
Sbjct: 566 IDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAML 625
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
A N E R A+ ++K+ P +YVL+SN+YA W VA +RK MK KGV+K
Sbjct: 626 SASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKK 685
Query: 594 EVGFSWAD-VGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
E G SW + GD+ H FS G + HP + I M E +LN K RA
Sbjct: 686 EPGLSWIEHQGDV---HFFSVGSSDHPDMKLINGMLE-------WLNMKATRA 728
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 233/506 (46%), Gaps = 19/506 (3%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D+ Y T L C+ + +H I+K G +++ N L+ Y + G +A +
Sbjct: 47 LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FDEMP +++VS+ + GY G+ + + R+G L+ FTS
Sbjct: 107 FDEMPERNNVSYVTLTQGYACQDPVGLYS-----RLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
E+ +H +K+GY ++ VG L++ YS C A VF + ++++ W ++S
Sbjct: 162 AEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSC 221
Query: 235 NR-----EDAVSLFKEMRLDGVCPNDVTF-IGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
ED++ L M +DG PN+ TF L +I +G + +HG +KT +
Sbjct: 222 YVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAF-HFAKSVHGQILKTCYEL 280
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+P V L+ +Y + M D+ KVF+E+ +++ W+ +I+ + QNG AV F +
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIR-M 339
Query: 349 KES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+E PN +T S+LN + L G++ H ++KVG D D V +AL+D+Y K
Sbjct: 340 REGFVVPNEFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDVYVSNALIDVYAKCE 397
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ + ++F E K+ +W +I G+ +N F+E V +TF S L
Sbjct: 398 KMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALG 457
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C + G + +K + + S ++DM + G ++ A+ + ++ +
Sbjct: 458 ACASLASMELGVQVHGLAIKTNNAKRVAVSNS-LIDMYAKCGDIKVAQTVFNEME-TIDV 515
Query: 527 SVLQSLLGACRIHGNVEMGERIADAL 552
+ +L+ HG RI D +
Sbjct: 516 ASWNALISGYSTHGLGRQALRIFDIM 541
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 115/525 (21%), Positives = 216/525 (41%), Gaps = 69/525 (13%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
LD ++ + C + + K IH +K G + N+L++ Y K DA +
Sbjct: 47 LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 217 FRRMHDRNVISWTTMIS-MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
F M +RN +S+ T+ +D V L+ + +G N F + + +
Sbjct: 107 FDEMPERNNVSYVTLTQGYACQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICW 166
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
+H +K + S V LI Y+ S+ + VF+ + C++I+ W ++S Y +NG
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENG 226
Query: 336 LSLAAVQAFFGV-IKESKPNAYTFGSVLNA-VGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
++Q + + PN YTF + L A +G + + H I+K + DP
Sbjct: 227 CFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLG---AFHFAKSVHGQILKTCYELDPR 283
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
VG LL +Y + G + ++ +VFNE + W+ +I+ ++G ++ F M
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGF 343
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK---DYHIEPSPDHYSCMVDMLGRVGRL 510
V P+ T S+L C G L ++K D + S + ++D+ + ++
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVS----NALIDVYAKCEKM 399
Query: 511 EEAEELVGQIP-------------------GGPGLSVLQ---------------SLLGAC 536
+ A +L ++ GG L++ + S LGAC
Sbjct: 400 DTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGAC 459
Query: 537 RIHGNVEMGERIADALMKMEPAGSGSYVLMSN----LYAEKGDWEMVAILRKGMKSKGVR 592
++E+G ++ +K A V +SN +YA+ GD ++ +
Sbjct: 460 ASLASMELGVQVHGLAIKTNNA---KRVAVSNSLIDMYAKCGDIKVAQTV---------- 506
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL-GSEMK 636
F+ + D+ + SG +TH + R+ + + GS+ K
Sbjct: 507 ----FNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCK 547
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 196/639 (30%), Positives = 335/639 (52%), Gaps = 84/639 (13%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
F L H L + + + + N +++ Y++ G+L +A +VFD +P +DSVSW I+ GY
Sbjct: 25 FHLDAHDLFNEMPVKT-TFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYN 83
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
Q G + +AI ++M++ + + T+ ++C + +GK++H +K+G V
Sbjct: 84 QMGRFE-DAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACV 142
Query: 195 SVGNVLMSTYSKCEVTGD---ANKVFRRMHDRNVISWTTMISMNRE-------------- 237
V N L++ Y+K TGD A VF RM RN SW MIS++
Sbjct: 143 PVANSLLNMYAK---TGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELL 199
Query: 238 ----------------------DAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEG 274
+A+ F + D + P+ + + A + + G
Sbjct: 200 SERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFG 259
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYAR-----------------------FESMQD--- 308
+ IHG ++T F + +V N LI+MYA+ F ++ +
Sbjct: 260 KQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYV 319
Query: 309 -------SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGS 360
+ ++F+ L ++++W A+I GY QNGL+ A++ F ++ E +PN++T +
Sbjct: 320 KLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAA 379
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE-TQ 419
+L+A + SL HG++ H+ I+ G P VG+AL MY K GSI +++VFN Q
Sbjct: 380 MLSASSSVT--SLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQ 437
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
+ +WT++I ALA+HG E + F++M G++PD IT++ VL+ C G++ +GR
Sbjct: 438 NRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRS 497
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIH 539
FD M + I+P+ HY+CMVD+ GR G L+EA + V +P P + SLL +C+++
Sbjct: 498 YFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVY 557
Query: 540 GNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSW 599
NV++ + A+ L+ +EP SG+Y ++N+Y+ G W+ A +RK MK++GV+KE G SW
Sbjct: 558 KNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSW 617
Query: 600 ADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+ + H F D HP+ +EIY+M + + E+K +
Sbjct: 618 VQIQ--NKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKM 654
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 236/508 (46%), Gaps = 84/508 (16%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAVTY 60
Y K G+ +KA +F+ + D VSW T++ G+ + +DA+ + M V+ T
Sbjct: 51 YAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTL 110
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP- 119
+ L+ C G ++HS +VK GL + V V N+L+ MY++ G L A+ VFD M
Sbjct: 111 TNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKL 170
Query: 120 ------------------------------NKDSVSWNAILSGYTQDGDYGVEAILALIE 149
+D VSWN++++G Q G + EA+
Sbjct: 171 RNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHG-FDNEALQFFSS 229
Query: 150 MMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK-- 206
+++ L+ D S SA SAC + + L GKQIHG ++ + +VGN L+S Y+K
Sbjct: 230 ILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSG 289
Query: 207 -CEVT---------------------------GD---ANKVFRRMHDRNVISWTTMI--- 232
E+ GD A ++F + D +V++WT MI
Sbjct: 290 GVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGY 349
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+N DA+ +FK M +G PN T ++ A S + G+ IH I++
Sbjct: 350 VQNGLN-NDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALS 408
Query: 290 PSVCNCLITMYARFESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
PSV N L TMYA+ S+ + KVF+ L R+ +SW ++I AQ+GL A++ F ++
Sbjct: 409 PSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQML 468
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKR 405
KP+ T+ VL+A L R + ++K DP + + ++D++G+
Sbjct: 469 TLGIKPDHITYVGVLSACTHG---GLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRA 525
Query: 406 GSIFESQR-VFNETQEKSEFAWTAIISA 432
G + E+ + V N E AW +++S+
Sbjct: 526 GLLQEAYKFVENMPMEPDVIAWGSLLSS 553
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 214/420 (50%), Gaps = 53/420 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSF-ALRMNLIGVVFD 56
++++ G+ D AL F L+ DIVSWN++++G + ++AL F + + + D
Sbjct: 180 ISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPD 239
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWG------RLVE 110
+ ++ALS C + E FG Q+H IV+ D+ VGNALI+MY++ G R++E
Sbjct: 240 RFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIE 299
Query: 111 ---------------------------ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEA 143
AR++F+ + + D V+W A++ GY Q+G +A
Sbjct: 300 QSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNG-LNNDA 358
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
I M+ +G R + + + SA +L GKQIH +I+ G SVGN L +
Sbjct: 359 IEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTM 418
Query: 204 YSKCEVTGDANKVFRRM-HDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVT 257
Y+K A KVF + +R+ +SWT+MI E+A+ LF++M G+ P+ +T
Sbjct: 419 YAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHIT 478
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN--CLITMYARFESMQDSEKVFDE 315
++G++ A + G LV++GR L +K +P++ + C++ ++ R +Q++ K +
Sbjct: 479 YVGVLSACTHGGLVEQGRSYFDL-MKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVEN 537
Query: 316 LSCR-EIISWNALISG---YAQNGLSLAAVQAFFGVIKESKPNAYT-FGSVLNAVGAAED 370
+ ++I+W +L+S Y L+ A + +I+ + AY+ +V ++ G +D
Sbjct: 538 MPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLL-LIEPNNSGAYSALANVYSSCGKWDD 596
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG-LSLA------------- 339
N L+ +YA+ D+ +F+E+ + SWN ++SGYA+ G L A
Sbjct: 14 NNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSV 73
Query: 340 -----------------AVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
A++ F ++K+ P +T +VL + A + G++ HS
Sbjct: 74 SWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGI--GKKVHS 131
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
++K+GL + V ++LL+MY K G + ++ VF+ + ++ +W A+IS G +
Sbjct: 132 FVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDL 191
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+ QF+ + + D +++ S++ C ++G ++ F S+LKD ++P + +
Sbjct: 192 ALAQFELLSER----DIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASAL 247
Query: 502 DMLGRVGRLEEAEELVGQI-------PGGPGLSVLQSLLGACRIHGNVEMGERIAD 550
+ +L +++ G I G G +L+ G VE+ RI +
Sbjct: 248 SACANLEKLSFGKQIHGYIVRTMFDASGAVG----NALISMYAKSGGVEIARRIIE 299
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 88/210 (41%), Gaps = 46/210 (21%)
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
++K+GL + + L+++Y K G ++ +FNE K+ F+W I+S A+ G E
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
F + VR DS+++ +++ + G +F M+KD +
Sbjct: 61 HQVFDLIP---VR-DSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL------------ 104
Query: 503 MLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM-----EP 557
P L ++L +C G+ +G+++ ++K+ P
Sbjct: 105 ---------------------PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVP 143
Query: 558 AGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+ + N+YA+ GD +M ++ MK
Sbjct: 144 VANS----LLNMYAKTGDLKMAKVVFDRMK 169
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 222/654 (33%), Positives = 336/654 (51%), Gaps = 25/654 (3%)
Query: 1 MNMYCKSGQFDK-ALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVT 59
+N Y K+G FDK AL +F+ + + VS+ T+ G+ D + R++ G +
Sbjct: 91 LNAYVKAG-FDKDALNLFDEMPERNNVSFVTLAQGY-ACQDPIGLYSRLHREGHELNPHV 148
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+++ L + + LHS IVK G DS +VG ALI YS G + AR VF+ +
Sbjct: 149 FTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGIL 208
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELG 178
KD V W I+S Y ++G + E L L+ MR G ++ +F +A A +
Sbjct: 209 CKDIVVWAGIVSCYVENGYF--EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFA 266
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
K +HG +K Y VG L+ Y++ DA KVF M +V+ W+ MI+ +
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+AV LF MR V PN+ T +++ +IG G +HGL +K F + V
Sbjct: 327 GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS 386
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESK 352
N LI +YA+ E M + K+F ELS + +SWN +I GY G A F ++ +
Sbjct: 387 NALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVS 446
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
TF S L A + + L G + H IK V ++L+DMY K G I +Q
Sbjct: 447 VTEVTFSSALGACASLASMDL--GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQ 504
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
VFNE + +W A+IS + HG + M+++ +P+ +TFL VL+ C G
Sbjct: 505 SVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAG 564
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+I +G+ F+SM++D+ IEP +HY+CMV +LGR G+L++A +L+ IP P + + +++
Sbjct: 565 LIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAM 624
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L A N E R A+ ++K+ P +YVL+SN+YA W VA +RK MK GV+
Sbjct: 625 LSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVK 684
Query: 593 KEVGFSWAD-VGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
KE G SW + GD+ H FS G + HP + I M E +LN K RA
Sbjct: 685 KEPGLSWIEHQGDV---HYFSVGLSDHPDMKLINGMLE-------WLNMKATRA 728
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 234/506 (46%), Gaps = 19/506 (3%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D+ Y L C+ + +H I+K G +++ N L+ Y + G +A +
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FDEMP +++VS+ + GY G+ + + R+G L+ FTS
Sbjct: 107 FDEMPERNNVSFVTLAQGYACQDPIGLYS-----RLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
E+ +H +K+GY ++ VG L++ YS C A VF + ++++ W ++S
Sbjct: 162 AEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC 221
Query: 235 NR-----EDAVSLFKEMRLDGVCPNDVTF-IGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
ED++ L MR+ G PN+ TF L +I +G + +HG +KT ++
Sbjct: 222 YVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF-DFAKGVHGQILKTCYVL 280
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+P V L+ +Y + M D+ KVF+E+ +++ W+ +I+ + QNG AV F +
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIR-M 339
Query: 349 KES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+E+ PN +T S+LN + L G++ H ++KVG D D V +AL+D+Y K
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDIYVSNALIDVYAKCE 397
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ + ++F E K+E +W +I G+ + F+E V +TF S L
Sbjct: 398 KMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALG 457
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C + G + +K + + S ++DM + G ++ A+ + ++ +
Sbjct: 458 ACASLASMDLGVQVHGLAIKTNNAKKVAVSNS-LIDMYAKCGDIKFAQSVFNEME-TIDV 515
Query: 527 SVLQSLLGACRIHGNVEMGERIADAL 552
+ +L+ HG RI D +
Sbjct: 516 ASWNALISGYSTHGLGRQALRILDIM 541
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 304/577 (52%), Gaps = 42/577 (7%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-G 154
N L+ YS+ G + E F+++P++D V+WN ++ GY+ G G A+ A MMR
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGA-AVKAYNTMMRDFS 134
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
L V+ + ++ LGKQIHG IK+G+ +++ VG+ L+ Y+ DA
Sbjct: 135 ANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK 194
Query: 215 KVFRRMHDRNVI------------------------------SWTTMI---SMN--REDA 239
KVF + DRN + SW MI + N ++A
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA 254
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ F+EM++ G+ + F ++ A + EG+ IH I+TNF V + LI M
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
Y + + + ++ VFD + + ++SW A++ GY Q G + AV+ F + + P+ YT
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
G ++A A SL+ G + H I GL V ++L+ +YGK G I +S R+FNE
Sbjct: 375 GQAISA--CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+ +WTA++SA A+ G + F +M G++PD +T V++ C R G++ KG+
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRI 538
F M +Y I PS HYSCM+D+ R GRLEEA + +P P +LL ACR
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 539 HGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
GN+E+G+ A++L++++P Y L+S++YA KG W+ VA LR+GM+ K V+KE G S
Sbjct: 553 KGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQS 612
Query: 599 WADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
W + LH FS+ D + P ++IY E L +++
Sbjct: 613 W--IKWKGKLHSFSADDESSPYLDQIYAKLEELNNKI 647
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 230/480 (47%), Gaps = 47/480 (9%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDA----VT 59
Y K+G + F L + D V+WN ++ G+ S + N + F A VT
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
T L + G Q+H ++K G +S + VG+ L+ MY+ G + +A++VF +
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 120 N------------------------------KDSVSWNAILSGYTQDGDYGVEAILALIE 149
+ KDSVSW A++ G Q+G EAI E
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG-LAKEAIECFRE 260
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M +GL++D F S ACG + GKQIH I+ + H+ VG+ L+ Y KC+
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 210 TGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
A VF RM +NV+SWT M+ + E+AV +F +M+ G+ P+ T I A
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+ + ++EG HG I + + +V N L+T+Y + + DS ++F+E++ R+ +SW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
A++S YAQ G ++ +Q F +++ KP+ T V++A A + + GQR + +
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV--EKGQR-YFKL 497
Query: 384 IKVGLDSDPIVG--SALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ P +G S ++D++ + G + E+ R N WT ++SA G+ E
Sbjct: 498 MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 124/242 (51%), Gaps = 8/242 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MYCK A +F+ + ++VSW ++ G+ ++++A+ L M G+ D
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T A+S C + G Q H + GL V V N+L+T+Y + G + ++ R+F+E
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D+VSW A++S Y Q G VE I +M++ GL+ D V+ T SAC +E
Sbjct: 432 MNVRDAVSWTAMVSAYAQFGR-AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 178 GKQIHGVSIKMGYGTHVSVGN--VLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMISM 234
G++ + + YG S+G+ ++ +S+ +A + M + I WTT++S
Sbjct: 491 GQRYFKL-MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 235 NR 236
R
Sbjct: 550 CR 551
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 162/401 (40%), Gaps = 105/401 (26%)
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNA-------- 326
+MIHG I+ E + N ++ YA +S + +VFD + + SWN
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 327 -----------------------LISGYAQNGLSLAAVQAFFGVIKESKPN--AYTFGSV 361
LI GY+ +GL AAV+A+ ++++ N T ++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN----- 416
L + +SL G++ H +IK+G +S +VGS LL MY G I ++++VF
Sbjct: 146 LKLSSSNGHVSL--GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 417 -------------------------ETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
EK +W A+I LA++G + + F+EM+
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGR-------------HLF-DSMLKDYHIEPSPDHY 497
+G++ D F SVL CG G I++G+ H++ S L D + + HY
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 498 ----------------SCMVDMLGRVGRLEEAEELVGQIPGG---PGLSVLQSLLGACRI 538
+ MV G+ GR EEA ++ + P L + AC
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 539 HGNVEMGERIADALMKMEPAGSGSYVLMSN----LYAEKGD 575
++E G + K +G YV +SN LY + GD
Sbjct: 384 VSSLEEGSQFHG---KAITSGLIHYVTVSNSLVTLYGKCGD 421
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 213/689 (30%), Positives = 350/689 (50%), Gaps = 96/689 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++M+ K G+ D A F + D+ WN ++SG+ + AL M L GV D
Sbjct: 232 LDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQ 291
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ NA+I+ Y++ G+ EA + F E
Sbjct: 292 VTW-----------------------------------NAIISGYAQSGQFEEASKYFLE 316
Query: 118 M-------PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
M PN VSW A+++G Q+G Y EA+ +M+ +G++ + ++ SA SAC
Sbjct: 317 MGGLKDFKPN--VVSWTALIAGSEQNG-YDFEALSVFRKMVLEGVKPNSITIASAVSACT 373
Query: 171 HEKNLELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
+ L G++IHG IK+ + + VGN L+ Y+KC A + F + +++SW
Sbjct: 374 NLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWN 433
Query: 230 TMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS------------------ 266
M++ + E+A+ L EM+ G+ P+ +T+ GL+ +
Sbjct: 434 AMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSM 493
Query: 267 ------------------IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
+ NL K G+ IHG ++ + V + LI+MY+ +S++
Sbjct: 494 GMDPNTTTISGALAACGQVRNL-KLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEV 552
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGA 367
+ VF ELS R+++ WN++IS AQ+G S+ A+ + + + N T S L A
Sbjct: 553 ACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPA--C 610
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
++ +L+ G+ H II+ GLD+ + ++L+DMYG+ GSI +S+R+F+ ++ +W
Sbjct: 611 SKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWN 670
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
+IS HG +N F++ G++P+ ITF ++L+ C +G+I +G F M +
Sbjct: 671 VMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE 730
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGER 547
Y ++P+ + Y+CMVD+L R G+ E E + ++P P +V SLLGACRIH N ++ E
Sbjct: 731 YAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEY 790
Query: 548 IADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG 607
A L ++EP SG+YVLM+N+Y+ G WE A +R MK +GV K G SW +V
Sbjct: 791 AARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVK--RK 848
Query: 608 LHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
LH F GD +HP E+I E L ++K
Sbjct: 849 LHSFVVGDTSHPLMEQISAKMESLYFDIK 877
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 133/571 (23%), Positives = 261/571 (45%), Gaps = 89/571 (15%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS---GFEKSDDALSFALRMNLIGVVFDA 57
+ +YC++G + A +F+ ++ ++ SW ++ G ++ + M GV D
Sbjct: 131 LEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDH 190
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ C + + + G ++ ++ G + V +++ M+ + GR+ ARR F+E
Sbjct: 191 FVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEE 250
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD WN ++SGYT G++ +A+ + +M G++ D V++
Sbjct: 251 IEFKDVFMWNIMVSGYTSKGEFK-KALKCISDMKLSGVKPDQVTW--------------- 294
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-----HDRNVISWTTMI 232
N ++S Y++ +A+K F M NV+SWT +I
Sbjct: 295 --------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALI 334
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + + +A+S+F++M L+GV PN +T + A + +L++ GR IHG CIK L
Sbjct: 335 AGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 394
Query: 288 -SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG-----LSLAAV 341
S+ V N L+ YA+ S++ + + F + +++SWNA+++GYA G + L +
Sbjct: 395 DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSE 454
Query: 342 QAFFGVIKE-------------------------------SKPNAYTFGSVLNAVGAAED 370
F G+ + PN T L A G +
Sbjct: 455 MKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRN 514
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
LK G+ H ++++ ++ VGSAL+ MY S+ + VF+E + W +II
Sbjct: 515 --LKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSII 572
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
SA A+ G + ++ +EM V +++T +S L C + + +G+ + +++ +
Sbjct: 573 SACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIR-CGL 631
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ + ++DM GR G ++++ + +P
Sbjct: 632 DTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 662
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 224/474 (47%), Gaps = 53/474 (11%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y++ L C G Q+H+ +V G+D ++G+ L+ +Y + G + +ARR+FD+M
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ SW AI+ Y GDY E I M+ +G+R DH F AC KN +GK
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYE-ETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 210
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR--- 236
++ + +G+ + V ++ + KC A + F + ++V W M+S
Sbjct: 211 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 270
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+ A+ +M+L GV P+ VT+ N
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTW-----------------------------------N 295
Query: 295 CLITMYARFESMQDSEKVFDELSCRE-----IISWNALISGYAQNGLSLAAVQAFFGVIK 349
+I+ YA+ +++ K F E+ + ++SW ALI+G QNG A+ F ++
Sbjct: 296 AIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVL 355
Query: 350 ES-KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRG 406
E KPN+ T S AV A ++S L+HG+ H + IKV LDSD +VG++L+D Y K
Sbjct: 356 EGVKPNSITIAS---AVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCR 412
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
S+ ++R F ++ +W A+++ A G +E + EM+ +G+ PD IT+ ++T
Sbjct: 413 SVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVT 472
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ G F M ++P+ S + G+V L+ +E+ G +
Sbjct: 473 GFTQYGDGKAALEFFQRM-HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYV 525
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 193/577 (33%), Positives = 316/577 (54%), Gaps = 24/577 (4%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
G ++H ++K GLD +V+VGNAL+ MY + AR VFD+M +D VSW+ ++ +
Sbjct: 112 LGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLS 171
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
++ ++ + A+ + EM +R V+ S + N+ +GK +H I+ H+
Sbjct: 172 RNKEFDM-ALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHM 230
Query: 195 SVGNV--LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----MNR-EDAVSLFKEMR 247
V L+ Y+KC G A ++F + + V+SWT MI+ NR E+ LF M+
Sbjct: 231 GVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQ 290
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
+ + PN++T + LI ++ G+ +H ++ F ++ L+ MY + ++
Sbjct: 291 EENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIR 350
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVIKES--KPNAYTFGSVLN 363
++ +FD R+++ W A++S YAQ QAF F ++ S +P T S+L+
Sbjct: 351 NARALFDSTQNRDVMIWTAMLSAYAQAN---CIDQAFNLFDQMRTSGVRPTKVTIVSLLS 407
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
A + L G+ HS+I K ++ D I+ +AL+DMY K G I + R+F E +
Sbjct: 408 LCAVAGALDL--GKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDI 465
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
W AII+ A HG E ++ F EME +GV+P+ ITF+ +L C G++ +G+ LF+
Sbjct: 466 CMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEK 525
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
M+ + + P +HY CMVD+LGR G L+EA E++ +P P V +L+ ACR+H N +
Sbjct: 526 MVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQ 585
Query: 544 MGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG 603
+GE A L+++EP G VLMSN+YA W A +RK MK+ G++KE G S V
Sbjct: 586 LGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHS---VI 642
Query: 604 DIDG-LHGFSSGDNTHPRSEEIYRMAECLGSEMKYLN 639
+++G +H F GD +HP +I R+ E L + LN
Sbjct: 643 EVNGTVHEFLMGDQSHP---QIRRINEMLAEMRRKLN 676
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 205/405 (50%), Gaps = 17/405 (4%)
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
S ACG +LGK+IHG +K G V VGN LM Y +C A VF +M +R
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 224 NVISWTTMI---SMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
+V+SW+TMI S N+E A+ L +EM V P++V + +++ + ++ G+ +H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 279 GLCIKTN---FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
I+ + + P+ L+ MYA+ + + ++F+ L+ + ++SW A+I+G ++
Sbjct: 219 AYVIRNSNNEHMGVPTT-TALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSN 277
Query: 336 LSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
+ F + +E+ PN T S++ G + L G++ H++I++ G +
Sbjct: 278 RLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQL--GKQLHAYILRNGFSVSLAL 335
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
+AL+DMYGK I ++ +F+ TQ + WTA++SA A+ + N F +M GV
Sbjct: 336 ATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV 395
Query: 455 RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
RP +T +S+L++C G + G+ + + K+ +E + +VDM + G + A
Sbjct: 396 RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE-RVEVDCILNTALVDMYAKCGDINAAG 454
Query: 515 ELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
L + + + +++ +HG GE D +ME G
Sbjct: 455 RLFIEAI-SRDICMWNAIITGFAMHG---YGEEALDIFAEMERQG 495
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 216/466 (46%), Gaps = 19/466 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M MY + + A +F+ + D+VSW+T++ ++ D AL MN + V
Sbjct: 136 MLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSE 195
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSE--VYVGNALITMYSRWGRLVEARRVF 115
V + ++ D G +H+ +++ + V AL+ MY++ G L AR++F
Sbjct: 196 VAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLF 255
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ + K VSW A+++G + E I M + + + ++ S CG L
Sbjct: 256 NGLTQKTVVSWTAMIAGCIRSNRLE-EGTKLFIRMQEENIFPNEITMLSLIVECGFTGAL 314
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+LGKQ+H ++ G+ +++ L+ Y KC +A +F +R+V+ WT M+S
Sbjct: 315 QLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAY 374
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A +LF +MR GV P VT + L+ ++ + G+ +H K +
Sbjct: 375 AQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDC 434
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ L+ MYA+ + + ++F E R+I WNA+I+G+A +G A+ F + ++
Sbjct: 435 ILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQ 494
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSI 408
KPN TF +L+A A ++ G++ ++ GL ++D+ G+ G +
Sbjct: 495 GVKPNDITFIGLLHACSHAGLVT--EGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLL 552
Query: 409 FESQRVFNETQEK-SEFAWTAIISALARHGDY---ESVMNQFKEME 450
E+ + K + W A+++A H + E Q E+E
Sbjct: 553 DEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIE 598
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 182/644 (28%), Positives = 341/644 (52%), Gaps = 15/644 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + P +V WN ++ + S ++ L M +GV T+ L C +
Sbjct: 63 VFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQA 122
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS--VSWNAIL 130
G +H+ GL ++YV AL+ MY++ G L +A+ +F+ + ++D V+WNA++
Sbjct: 123 LQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMI 182
Query: 131 SGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
+ ++ + + I ++ +M + G+ + + S G L GK IH I+ +
Sbjct: 183 AAFSFHALHA-QTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFF 241
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKE 245
+V + L+ Y+KC + A K+F ++ +N + W+ MI + DA++L+ +
Sbjct: 242 FDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDD 301
Query: 246 MR-LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
M + G+ P T ++ A + +K G+ +H IK+ + +V N LI+MYA+
Sbjct: 302 MLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCG 361
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNA 364
M ++ DE+ ++ +S++A+ISG QNG + A+ F ++ S Y +
Sbjct: 362 IMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKAL-LIFRQMQSSGIAPYLETMIALL 420
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+ +L+HG CH + + G +D + +A++DMY K G I S+ +F+ Q +
Sbjct: 421 PACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDII 480
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+W +I HG ++ F+E++ G++PD +T ++VL+ C +G++ +G++ F SM
Sbjct: 481 SWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSM 540
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
++++I+P HY CMVD+L R G L+EA + ++P P + + +LL ACR H N+EM
Sbjct: 541 SQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEM 600
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
GE+++ + + P G+G++VLMSN+Y+ G W+ A +R + G +K G SW ++
Sbjct: 601 GEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISG 660
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+ +H F G +HP+S I + + L +MK L + + + L
Sbjct: 661 V--IHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVL 702
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 182/377 (48%), Gaps = 14/377 (3%)
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
AR VFD++P V WN ++ Y G + ++I + M++ G+ + +F AC
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQ-QSIYLYLHMLQLGVTPTNFTFPFLLKACS 118
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISW 228
+ L+LG+ IH + +G + V L+ Y+KC A +F + DR++++W
Sbjct: 119 SLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAW 178
Query: 229 TTMISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
MI+ + +M+ GV PN T + ++ I N + +G+ IH I+
Sbjct: 179 NAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIR 238
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
F + L+ MYA+ + + K+F+ ++ + + W+A+I GY + S++ A
Sbjct: 239 NFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHD-SISDALA 297
Query: 344 FFG---VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
+ I P T ++L A D LK G++ H H+IK G+D D VG++L+
Sbjct: 298 LYDDMLCIYGLNPTPATLATMLRACAQLTD--LKRGKKLHCHMIKSGMDLDTTVGNSLIS 355
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K G + + +E K +++AIIS ++G E + F++M++ G+ P T
Sbjct: 356 MYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLET 415
Query: 461 FLSVLTVCGRNGMIHKG 477
+++L C + G
Sbjct: 416 MIALLPACSHLAALQHG 432
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 188/377 (49%), Gaps = 15/377 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP--DIVSWNTVLSGFE---KSDDALSFALRMNLIGVVF 55
++MY K G +A +FN++++ DIV+WN +++ F + +M GV
Sbjct: 149 LHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTP 208
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ T + L G +H+ ++ V + AL+ MY++ L AR++F
Sbjct: 209 NSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIF 268
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR--KGLRLDHVSFTSAASACGHEK 173
+ + K+ V W+A++ GY + LAL + M GL + + AC
Sbjct: 269 NTVNKKNDVCWSAMIGGYVLHD--SISDALALYDDMLCIYGLNPTPATLATMLRACAQLT 326
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+L+ GK++H IK G +VGN L+S Y+KC + +A M ++ +S++ +IS
Sbjct: 327 DLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIIS 386
Query: 234 ---MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
N E A+ +F++M+ G+ P T I L+ A S ++ G HG + F +
Sbjct: 387 GCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTN 446
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ S+CN +I MY++ + S ++FD + R+IISWN +I GY +GL + A+ F +
Sbjct: 447 DTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQ 506
Query: 349 KES-KPNAYTFGSVLNA 364
KP+ T +VL+A
Sbjct: 507 ALGLKPDDVTLIAVLSA 523
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 175/342 (51%), Gaps = 14/342 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLI-GVVFD 56
++MY K A IFN +N + V W+ ++ G+ D DAL+ M I G+
Sbjct: 252 LDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPT 311
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T +T L C G +LH ++K G+D + VGN+LI+MY++ G + A D
Sbjct: 312 PATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLD 371
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
EM KD+VS++AI+SG Q+G Y +A+L +M G+ + + AC H L+
Sbjct: 372 EMIAKDTVSYSAIISGCVQNG-YAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQ 430
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G HG ++ G+ S+ N ++ YSKC + ++F RM +R++ISW TMI
Sbjct: 431 HGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYG 490
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+A+SLF+E++ G+ P+DVT I ++ A S LV EG+ + NF +P
Sbjct: 491 IHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFS-SMSQNFNIKPR 549
Query: 292 VCN--CLITMYARFESMQDSEKVFDELS-CREIISWNALISG 330
+ + C++ + AR ++ ++ + + W AL++
Sbjct: 550 MAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAA 591
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 298 TMYARFE----SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
T AR+ +Q + VFD++ ++ WN +I YA +G ++ + +++
Sbjct: 45 TQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVT 104
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P +TF +L A + + + L G+ H+H +GL D V +ALL MY K G ++++Q
Sbjct: 105 PTNFTFPFLLKACSSLQALQL--GRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQ 162
Query: 413 RVFNET--QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+FN Q++ AW A+I+A + H + ++ +M+ GV P+S T +S+L G+
Sbjct: 163 TLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQ 222
Query: 471 NGMIHKGRHLFDSMLKDY 488
+H+G+ + ++++
Sbjct: 223 ANALHQGKAIHAYYIRNF 240
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 198/585 (33%), Positives = 316/585 (54%), Gaps = 18/585 (3%)
Query: 75 FGLQLHSLIVKFGLDSEV--YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G +H+ IVK LDS ++ N LI MYS+ AR V P ++ VSW +++SG
Sbjct: 24 LGRVVHARIVK-TLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Q+G + A++ EM R+G+ + +F A A + GKQIH +++K G
Sbjct: 83 LAQNGHFST-ALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL 141
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMR 247
V VG Y K + DA K+F + +RN+ +W IS + D A+ F E R
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 248 -LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+DG PN +TF ++A S + G +HGL +++ F ++ SVCN LI Y + + +
Sbjct: 202 RIDGH-PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAV 365
+ SE +F E+ + +SW +L++ Y QN A + K+ + + + SVL+A
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 320
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ L G+ H+H +K ++ VGSAL+DMYGK G I +S++ F+E EK+
Sbjct: 321 AGMAGLEL--GRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 378
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGV--RPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
++I A G + + F+EM +G P+ +TF+S+L+ C R G + G +FDS
Sbjct: 379 RNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS 438
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
M Y IEP +HYSC+VDMLGR G +E A E + ++P P +SV +L ACR+HG +
Sbjct: 439 MRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ 498
Query: 544 MGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG 603
+G A+ L K++P SG++VL+SN +A G W +R+ +K G++K G+SW V
Sbjct: 499 LGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVK 558
Query: 604 DIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+ +H F + D +H ++EI L +EM+ K + ++L
Sbjct: 559 --NQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSL 601
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 218/450 (48%), Gaps = 16/450 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY K + A + ++VSW +++SG ++ AL M GVV +
Sbjct: 49 INMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPND 108
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ A + G Q+H+L VK G +V+VG + MY + +AR++FDE
Sbjct: 109 FTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDE 168
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P ++ +WNA +S DG EAI A IE R + ++F + +AC +L L
Sbjct: 169 IPERNLETWNAFISNSVTDGR-PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNL 227
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
G Q+HG+ ++ G+ T VSV N L+ Y KC+ + +F M +N +SW ++++
Sbjct: 228 GMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ 287
Query: 235 NRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ED A L+ R D V +D ++ A + ++ GR IH +K V
Sbjct: 288 NHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFV 347
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG---LSLAAVQAFFGVIK 349
+ L+ MY + ++DSE+ FDE+ + +++ N+LI GYA G ++LA +
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 407
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSI 408
PN TF S+L+A A ++++G + + G++ S ++DM G+ G +
Sbjct: 408 GPTPNYMTFVSLLSACSRAG--AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMV 465
Query: 409 FESQRVFNETQEKSEFA-WTAIISALARHG 437
+ + + + W A+ +A HG
Sbjct: 466 ERAYEFIKKMPIQPTISVWGALQNACRMHG 495
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 182/382 (47%), Gaps = 18/382 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+MYCK+ D A +F+ + ++ +WN +S + +A+ + I ++
Sbjct: 150 FDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNS 209
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ L+ C D G+QLH L+++ G D++V V N LI Y + ++ + +F E
Sbjct: 210 ITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTE 269
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K++VSW ++++ Y Q+ + ++L L + + +S SAC LEL
Sbjct: 270 MGTKNAVSWCSLVAAYVQNHEDEKASVLYL-RSRKDIVETSDFMISSVLSACAGMAGLEL 328
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+ IH ++K + VG+ L+ Y KC D+ + F M ++N+++ ++I
Sbjct: 329 GRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAH 388
Query: 233 SMNREDAVSLFKEM--RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A++LF+EM R G PN +TF+ L+ A S V+ G I +++ + EP
Sbjct: 389 QGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEP 447
Query: 291 SV--CNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNG---LSLAAVQAF 344
+C++ M R ++ + + ++ + IS W AL + +G L L A +
Sbjct: 448 GAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENL 507
Query: 345 FGVIKESKPNAYTFGSVLNAVG 366
F + + N + A G
Sbjct: 508 FKLDPKDSGNHVLLSNTFAAAG 529
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 219/716 (30%), Positives = 364/716 (50%), Gaps = 80/716 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIG-VVFD 56
MN Y K G A +F+ + D+ SWNT++SG+ ++ D L + M+ G + +
Sbjct: 78 MNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPN 137
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF- 115
A T+ + C QL L KF + V AL+ M+ R G + A R+F
Sbjct: 138 AFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFS 197
Query: 116 ------------------------------DEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
++M +D VSWN +++ +Q G EA+
Sbjct: 198 QIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVR-EALG 256
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
++EM RKG+RLD ++TS+ +AC +L GKQ+H I+ V + L+ Y+
Sbjct: 257 LVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYA 316
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMI--SMNRE---DAVSLFKEMRLDGVCPNDVTFIG 260
KC +A +VF + DRN +SWT +I S+ E +V LF +MR + + +
Sbjct: 317 KCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALAT 376
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
LI + GR +H LC+K+ V N LI++YA+ +Q++E VF +S R+
Sbjct: 377 LISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERD 436
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAV---GAAED------- 370
I+SW ++I+ Y+Q G + A + F G+ + NA T+ ++L A GA ED
Sbjct: 437 IVSWTSMITAYSQIGNIIKAREFFDGM---ATRNAITWNAMLGAYIQHGAEEDGLKMYSA 493
Query: 371 --------------ISL----------KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++L K G + H +K GL + V +A + MY K G
Sbjct: 494 MLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCG 553
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I E+Q++F+ K +W A+I+ ++HG + F +M +KG +PD I++++VL+
Sbjct: 554 RISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLS 613
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G++ +G+ FD M + + I P +H+SCMVD+LGR G L EA++L+ ++P P
Sbjct: 614 GCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTA 673
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +LL AC+IHGN E+ E A + +++ SGSY+L++ +Y++ G + A +RK M
Sbjct: 674 EVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLM 733
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKR 642
+ KG++K G+SW +V + +H F + D +HP+ I + L ++ +L R
Sbjct: 734 RDKGIKKNPGYSWMEVE--NKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVR 787
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 211/469 (44%), Gaps = 45/469 (9%)
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
+ V N ++ Y++ G L +A +FD MP +D SWN ++SGY Q + ++ + +
Sbjct: 68 EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRF-LDGLETFV 126
Query: 149 EMMRKGLRLDHV-SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
M R G L + +F +CG EL Q+ G+ K + V L+ + +C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 208 EVTGDANKVFRR-------------------------------MHDRNVISWTTMISMNR 236
A+++F + M +R+V+SW MI+
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +A+ L EM GV + T+ + A + + G+ +H I++ +P
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + LI +YA+ S +++++VF+ L R +SW LI G Q +V+ F + E
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAEL 366
Query: 352 KP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + ++++ D+ L G++ HS +K G + +V ++L+ +Y K G +
Sbjct: 367 MAIDQFALATLISGCFNRMDLCL--GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 424
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF+ E+ +WT++I+A ++ G+ F M + ++IT+ ++L +
Sbjct: 425 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQ 480
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
+G G ++ +ML + P Y + +G + ++++G
Sbjct: 481 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGH 529
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 136/296 (45%), Gaps = 45/296 (15%)
Query: 261 LIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
L+HA +S G L R++ + N ++ N ++ YA+ S+ D+E++FD + R
Sbjct: 45 LLHAYLSCGALSDARRLLRADIKEPNVITH----NIMMNGYAKQGSLSDAEELFDRMPRR 100
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQ 377
++ SWN L+SGY Q L ++ F + + +S PNA+TF V+ + GA L
Sbjct: 101 DVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCREL--AP 158
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF------------- 424
+ K DP V +AL+DM+ + G + + R+F++ + + F
Sbjct: 159 QLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLY 218
Query: 425 ------------------AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+W +I+AL++ G + EM KGVR DS T+ S LT
Sbjct: 219 GIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLT 278
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
C R + G+ L +++ P D Y S ++++ + G +EA+ + +
Sbjct: 279 ACARLFSLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCGSFKEAKRVFNSL 331
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
+ + I + +++ Y K+GS+ +++ +F+ + +W ++S + + + F
Sbjct: 68 EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVS 127
Query: 449 MENKG-VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
M G P++ TF V+ CG G L K + PD + +VDM R
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWK-FDFWGDPDVETALVDMFVRC 186
Query: 508 GRLEEAEELVGQIPGGPGLSVLQSLL-GACRIHG 540
G ++ A L QI P + S+L G +++G
Sbjct: 187 GYVDFASRLFSQIE-RPTIFCRNSMLAGYAKLYG 219
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 196/625 (31%), Positives = 333/625 (53%), Gaps = 18/625 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ Y G+ A +F+ + D+VSWN+++S + +DA + M GV +
Sbjct: 161 VTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNV 220
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + L C FGL +H L++KFGL+S V +GNAL+ MY ++G L + VF+
Sbjct: 221 ASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNG 280
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
M K+ VSWN+ + + G + E +L + +M + + V+ +S A
Sbjct: 281 MQEKNEVSWNSAIGCFAHAGFH--EDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFH 338
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
LGK++HG SI+ + + + N LM Y+K + A+ +F + RNV+SW MI+
Sbjct: 339 LGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLT 398
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +A L EM+ +G CPN T + L+ A S VK G+ IH I+ + +S+
Sbjct: 399 QNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLF 458
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
V N LI +YA+ + + +FD S ++ +S+N LI GY+Q+ ++ F + +
Sbjct: 459 VSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAG 517
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ +A +F L+A + K G+ H ++K LDS P + ++LLD+Y K G +
Sbjct: 518 IEHDAVSFMGCLSACSNLS--AFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDT 575
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ ++FN +K +W +I HG + F M++ G+ D +++++VL+VC
Sbjct: 576 ASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSH 635
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G+ F M+ +I+P HY+CMVD+LGR G+L E+ E++ +P V
Sbjct: 636 GGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWG 694
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLG+CRIHG++E+ A+ L +++P SG Y L+ N+Y+E G W ++K MKS+
Sbjct: 695 ALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEANGVKKLMKSRK 754
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGD 615
V+K +SW G + L F GD
Sbjct: 755 VQKNPAYSWVQSG--NKLQAFLVGD 777
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 259/489 (52%), Gaps = 20/489 (4%)
Query: 76 GLQLHSLIVKFGLD-SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
G +LH+ ++ GL ++V+ GN L+T Y+ GR +ARRVFDEMP +D VSWN+++S
Sbjct: 137 GAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALL 196
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
+G +A A++ MMR G+ ++ S S ACG E++ G +HG+ +K G + V
Sbjct: 197 TNGMLE-DAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVV 255
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLD 249
++GN L+ Y K + VF M ++N +SW + I + ED + +F+ M
Sbjct: 256 NLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEH 315
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
V P VT L+ A+ G+ +HG I+ S+ + N L+ MYA+F + +
Sbjct: 316 DVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKA 375
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK----PNAYTFGSVLNAV 365
+F+ + R ++SWNA+I+ QNG A +AF VI+ K PN++T ++L A
Sbjct: 376 SAIFENIEVRNVVSWNAMIANLTQNG---AEAEAFRLVIEMQKNGECPNSFTLVNLLPA- 431
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ S+K G++ H+ I+ L SD V +AL+D+Y K G + ++ +F+ +++
Sbjct: 432 -CSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEKDGVSY 490
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
T I+ +ES ++ F++M G+ D+++F+ L+ C +G+ + ++
Sbjct: 491 NTLIVGYSQSQCCFES-LHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLV 549
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
K ++ P + ++D+ + G L+ A ++ +I S +LG +HG +++
Sbjct: 550 KRL-LDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGY-GMHGQIDVA 607
Query: 546 ERIADALMK 554
+ D LMK
Sbjct: 608 FELFD-LMK 615
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 144/288 (50%), Gaps = 8/288 (2%)
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK---EGRMIHGLCIKTN-FLSEPSVC 293
+A+ ++ M GV P+D TF +HA + + +G +H ++ L++
Sbjct: 98 EALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLLADVFAG 157
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N L+T YA D+ +VFDE+ R+++SWN+L+S NG+ A +A G+++ P
Sbjct: 158 NTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVP 217
Query: 354 -NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
N + S+L A G D G H ++K GL+S +G+AL+DMYGK G + S
Sbjct: 218 VNVASLVSILPACGTERDEGF--GLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSM 275
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
VFN QEK+E +W + I A G +E V+ F+ M V P S+T S+L G
Sbjct: 276 HVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLG 335
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
H G+ L ++ +E + ++DM + G E+A + I
Sbjct: 336 YFHLGKELHGYSIRRA-VESDIFIANTLMDMYAKFGCSEKASAIFENI 382
>gi|302810303|ref|XP_002986843.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
gi|300145497|gb|EFJ12173.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
Length = 845
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 190/585 (32%), Positives = 321/585 (54%), Gaps = 17/585 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NM+ K G D+A +F+ + D+ SWN +++ + S +AL RM V D
Sbjct: 266 INMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMP-SEVAVDK 324
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ALS C E G +HS + + GL+++V G AL+TMYSR G L EARRVFD
Sbjct: 325 TTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDG 384
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ K+ VSWN +++ Y +D A+ M+ G+R + + SA + +
Sbjct: 385 ILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVECQS---V 441
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GKQ+HG + G + +G+ L++ Y + GDA +VF ++ +R+V +W ++ +
Sbjct: 442 GKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVG 501
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ F M L+G N TF+ + A+S + V GR +HGL ++ ++ +V
Sbjct: 502 HGQPREALEWFSRMLLEGASGNRATFLLALSAVS-PDRVSYGRKLHGLIAESGLEADNNV 560
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N LI+MYAR +S++D+ FD L + I+SW ++I+ G A+ F + E +
Sbjct: 561 ANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRM--ELE 618
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ TF +VL A + + G+ HS ++GL+S+ V +AL+ M+ K G++ E++
Sbjct: 619 PDRVTFTTVLEACTIVS--AHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEAR 676
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
R+F + + W A++ A+ G +SV++ F M+ +GV PD ITFL+V++ C G
Sbjct: 677 RIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHAG 736
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ KG F SM DY + + Y C++D+L R G+LEEA + + +P GP ++L
Sbjct: 737 LVEKGARTFASMGPDYGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGMPCGPSDVTWKTL 796
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
L AC+I G+V G A ++++ EP G+ ++V +S + + G+ E
Sbjct: 797 LAACKIQGDVRRGSAAARSVIEREPYGAAAFVELSYMSSIAGEEE 841
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 154/568 (27%), Positives = 281/568 (49%), Gaps = 33/568 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+ M+ K A +F + + +V W ++++ F E D A F RM L GV+ D
Sbjct: 70 VRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDR 129
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ + L+ C E G +H LIV L+S+V +GNAL+ M ++ L A R F
Sbjct: 130 VTFISILNAC---ESLAQGELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQR 186
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D +SW +++ Y ++G EA + M+ +G+ ++++F + +AC ++ +L
Sbjct: 187 MPRRDVISWTGMVTAYARNGHIA-EAFGYYLRMLLEGVVPNNITFLAVLAACSSARDADL 245
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
++G ++ + T V N ++ +SKC A+ VF RM +V SW M++ +
Sbjct: 246 ---VYGNVVEAEWETDTMVANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQ 302
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF+ M + V + T + + + +++G+ IH + ++
Sbjct: 303 HGFSSEALELFRRMPSE-VAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVA 361
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN-GLSLAAVQAF-FGVIKE 350
L+TMY+R + ++ +VFD + + ++SWN +I+ Y ++ L A++ F ++
Sbjct: 362 GTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDG 421
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P T LN V A E S+ G++ H I+ GL SD +GSAL++MY + GS+ +
Sbjct: 422 VRPTRTT---ALNVVSAVECQSV--GKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGD 476
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++RVF + E+ FAW AI+ HG + F M +G + TFL L+
Sbjct: 477 ARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVSP 536
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+ + GR L ++ + +E + + ++ M R LE+A ++ +S
Sbjct: 537 D-RVSYGRKL-HGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVS-WT 593
Query: 531 SLLGACRIHGNVEMG--ERIADALMKME 556
S++ AC V++G + D +ME
Sbjct: 594 SVIAAC-----VDLGSCQEAIDLFQRME 616
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 243/486 (50%), Gaps = 24/486 (4%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
++ C + + ++S I G+ + + G +++ M+ + + +A RVF++M ++
Sbjct: 35 VNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVFEQMLDRSM 94
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
V W ++++ + D D A L M +G+ D V+F S +AC ++L G+ +H
Sbjct: 95 VLWTSMVTAFVDDEDVD-RAWLFFFRMQLEGVLPDRVTFISILNAC---ESLAQGELVHR 150
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NRED 238
+ + + V +GN LM +KC A + F+RM R+VISWT M++ + +
Sbjct: 151 LIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGHIAE 210
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
A + M L+GV PN++TF+ ++ A S ++ +++G ++ + ++ V N I
Sbjct: 211 AFGYYLRMLLEGVVPNNITFLAVLAACSSA---RDADLVYGNVVEAEWETDTMVANASIN 267
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTF 358
M+++ + + VF + ++ SWNA+++ AQ+G S A++ F + E + T
Sbjct: 268 MFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSEVAVDKTTL 327
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
L+ A E SL+ G+ HS + ++GL++D + G+AL+ MY + G + E++RVF+
Sbjct: 328 VIALSTCAAPE--SLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDGI 385
Query: 419 QEKSEFAWTAIISALARHGDYES-VMNQFKEMENKGVRPDSITFLSVLTV--CGRNGMIH 475
K+ +W +I+A R S + F+ M GVRP T L+V++ C G
Sbjct: 386 LGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVECQSVGKQL 445
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
G + + D I S +V+M R G L +A + +I + +++G
Sbjct: 446 HGWIVDTGLYSDSFIG------SALVNMYERTGSLGDARRVFEKIIERDVFA-WNAIVGV 498
Query: 536 CRIHGN 541
C HG
Sbjct: 499 CVGHGQ 504
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 179/371 (48%), Gaps = 16/371 (4%)
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
DH F + C K L ++ G G ++ + KC DA++VF
Sbjct: 27 DHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVF 86
Query: 218 RRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
+M DR+++ WT+M++ +D A F M+L+GV P+ VTFI +++A +
Sbjct: 87 EQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNAC---ESLA 143
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
+G ++H L + N S+ + N L+ M A+ + + + F + R++ISW +++ YA
Sbjct: 144 QGELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYA 203
Query: 333 QNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
+NG A + ++ E PN TF +VL A +A D L +G ++++ ++D
Sbjct: 204 RNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDADLVYG-----NVVEAEWETD 258
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+V +A ++M+ K G + + VF+ + +W A+++ALA+HG + F+ M +
Sbjct: 259 TMVANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPS 318
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
+ V D T + L+ C + G+ + S + +E + +V M R G L
Sbjct: 319 E-VAVDKTTLVIALSTCAAPESLEDGKSI-HSRVARLGLETDVVAGTALVTMYSRCGDLG 376
Query: 512 EAEELVGQIPG 522
EA + I G
Sbjct: 377 EARRVFDGILG 387
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 195/575 (33%), Positives = 315/575 (54%), Gaps = 27/575 (4%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRW--GRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
Q+H+ +++ L + + + ++ + G L AR VF+++PN + + N+I+ GYT
Sbjct: 58 QIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT- 116
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+ + +AIL MM +GL D +F S +CG L GKQ+H S K+G+ +
Sbjct: 117 NKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQLHCHSTKLGFASDAY 173
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDG 250
+ N LM+ YS C A KVF +M +++V+SW TMI + +A+ LF+ M +
Sbjct: 174 IQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIAS 233
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V PN++T + ++ A + ++ + +H +T + + L+ +Y + +
Sbjct: 234 VKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLAR 293
Query: 311 KVFDELSCREIISWNALISGYAQN-----GLSLAAVQAFFGVIKESKPNAYTFGSVLNAV 365
+F+++ + + WN +I+G+ ++ LSL GV K + T S+L +
Sbjct: 294 DLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGV----KGDKVTMASLL--I 347
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+L+ G+ H +I K ++ D +G+AL+DMY K GSI + RVF E EK
Sbjct: 348 ACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMT 407
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
WTA+I LA G + F EM+ V+PD+ITF+ VL C G++++G F+SM
Sbjct: 408 WTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMP 467
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
Y I+PS +HY CMVDMLGR GR+ EAE+L+ +P P VL LL ACRIHGN+ +
Sbjct: 468 NKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVA 527
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
ER A L++++P G+YVL+SN+Y+ +WE +R+ M + ++K G S +VG +
Sbjct: 528 ERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGV 587
Query: 606 DGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNS 640
+H F GD +HP+S EIY E L M+ L S
Sbjct: 588 --VHEFVKGDVSHPQSSEIY---ETLDDMMRRLKS 617
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/460 (30%), Positives = 224/460 (48%), Gaps = 20/460 (4%)
Query: 7 SGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTA 63
SG A +FN + NP + N+++ G+ + A+ F M L G+ D T+ +
Sbjct: 87 SGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSL 146
Query: 64 LSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
C G L G QLH K G S+ Y+ N L+ MYS G LV AR+VFD+M NK
Sbjct: 147 FKSC----GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKS 202
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSW ++ Y Q D EAI M ++ + ++ + +AC ++LE KQ+H
Sbjct: 203 VVSWATMIGAYAQ-WDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVH 261
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED---- 238
+ G G H + + LM Y KC A +F +M ++N+ W MI+ + ED
Sbjct: 262 KYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYE 321
Query: 239 -AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
A+SLF EM+L GV + VT L+ A + ++ G+ +H K + ++ L+
Sbjct: 322 EALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALV 381
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAY 356
MYA+ S++ + +VF E+ +++++W ALI G A G L A++ F + + E KP+A
Sbjct: 382 DMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAI 441
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF- 415
TF VL A A ++ + +S K G+ ++DM G+ G I E++ +
Sbjct: 442 TFVGVLAACSHAGLVN-EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQ 500
Query: 416 NETQEKSEFAWTAIISALARHGDY---ESVMNQFKEMENK 452
N F ++SA HG+ E Q E++ K
Sbjct: 501 NMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPK 540
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 167/327 (51%), Gaps = 12/327 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
MNMY G A +F+ + N +VSW T++ + + D +A+ RM + V +
Sbjct: 179 MNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNE 238
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T L+ C Q+H I + G+ + +AL+ +Y + G AR +F++
Sbjct: 239 ITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNK 298
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP K+ WN +++G+ +D DY EA+ EM G++ D V+ S AC H LEL
Sbjct: 299 MPEKNLFCWNIMINGHVEDSDYE-EALSLFNEMQLSGVKGDKVTMASLLIACTHLGALEL 357
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
GK +H K V++G L+ Y+KC A +VF+ M +++V++WT +I +M
Sbjct: 358 GKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAM 417
Query: 235 NRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+ LF EM++ V P+ +TF+G++ A S LV EG + + + + +PS+
Sbjct: 418 CGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG-IAYFNSMPNKYGIQPSI 476
Query: 293 CN--CLITMYARFESMQDSEKVFDELS 317
+ C++ M R + ++E + +
Sbjct: 477 EHYGCMVDMLGRAGRIAEAEDLIQNMP 503
>gi|449496714|ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11290-like [Cucumis sativus]
Length = 616
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 302/547 (55%), Gaps = 11/547 (2%)
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ +S C FG+Q+HS I+K G Y+ AL+ MY + + +A +VFDEM
Sbjct: 72 TKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSC 131
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
V+WN++++GY Q G Y + A+ +EM++KG+ S + C + +LG Q
Sbjct: 132 PSVVTWNSLVTGYLQAG-YPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQ 190
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MN 235
+H +S+K+ + ++V VG L+ YSKC D+ +VF M ++NV +WT+MIS
Sbjct: 191 LHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQL 250
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
+A+ L +EM + PN +T+ L+ + S + + IH I + S +
Sbjct: 251 PHEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVT 310
Query: 296 LITMYARF-ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
L+T Y+ S++D KV + + ISWNA+I+G+ G+ A++ F + +E
Sbjct: 311 LVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDV 370
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ +TF S+ A+G +L+ G++ H + K G + V + L+ MY + G+I +S+
Sbjct: 371 DFFTFTSIFKAIGMTS--ALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKM 428
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF+ E +W +++S A HG E ++ F++M ++PD+ +FL+VLT C G+
Sbjct: 429 VFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGL 488
Query: 474 IHKGRHLFDSMLKDYHIEPSP-DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+ KG F M +EP +HY+ +VD+ GR G+L EAE + IP PG+S+ ++L
Sbjct: 489 LDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKAL 548
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L AC IHGN ++ R A L+++ P +Y+++SN G W+ A +R+ M ++GV+
Sbjct: 549 LSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDGYWDDAASIRRLMSNRGVK 608
Query: 593 KEVGFSW 599
KE GFSW
Sbjct: 609 KEPGFSW 615
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 246/486 (50%), Gaps = 19/486 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K A +F+ ++ P +V+WN++++G+ ++ A+S L M G+
Sbjct: 110 VDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTP 169
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S L C + G QLH++ +K S V VG LI MYS+ L ++RRVFD
Sbjct: 170 FSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDI 229
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M NK+ +W +++SGY ++ EA+ + EM+ L + +++ S S+ ++ +
Sbjct: 230 MLNKNVFTWTSMISGYARN-QLPHEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPRHFDK 288
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSK-CEVTGDANKVFRRMHDRNVISWTTMISMNR 236
KQIH I GY ++ + L++ YS+ C D KV + + ISW +I+
Sbjct: 289 CKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFT 348
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E+A+ F +MR + + TF + AI + + ++EG+ IHGL KT + S
Sbjct: 349 NLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLS 408
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L++MYAR +++DS+ VF ++ ++ISWN+L+SG A +G A+ F + +
Sbjct: 409 VQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTC 468
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSI 408
KP+ +F +VL A L G + L P + + L+D++G+ G +
Sbjct: 469 IKPDNTSFLAVLTACSHVG--LLDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKL 526
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP-DSITFLSVLT 466
+E++ E + A++SA HG+ + + K++ + P D T++ +
Sbjct: 527 YEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLE--LYPYDPATYIMLSN 584
Query: 467 VCGRNG 472
GR+G
Sbjct: 585 ALGRDG 590
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 200/444 (45%), Gaps = 31/444 (6%)
Query: 133 YTQDGDYGVEAILA---------LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
YT D ++ +L L++++R G T S C L+ G Q+H
Sbjct: 33 YTHSEDVSIKPLLQTHNVVDIQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHS 92
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED----- 238
IK+G+ + + L+ Y KC DA+KVF M +V++W ++++ +
Sbjct: 93 TIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLM 152
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
AVSLF EM G+ P + G + S G +H + +K F S V LI
Sbjct: 153 AVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLID 212
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYT 357
MY++ ++QDS +VFD + + + +W ++ISGYA+N L A+ ++ + +PN T
Sbjct: 213 MYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMXLMREMLHLNLEPNGMT 272
Query: 358 FGSVLNAVGAAEDISLKHGQRC---HSHIIKVGLDSDPIVGSALLDMYGK-RGSIFESQR 413
+ S+L++ +H +C H II G +S+ + L+ Y + GS+ + ++
Sbjct: 273 YNSLLSSFSCP-----RHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRK 327
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
V + + + +W A+I+ G E + F +M + D TF S+ G
Sbjct: 328 VCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSA 387
Query: 474 IHKGRHLFDSMLKD-YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+ +G+ + + K Y + S + +V M R G + ++ ++V + L SL
Sbjct: 388 LEEGKQIHGLVYKTGYTLNLSVQ--NGLVSMYARSGAIRDS-KMVFSMMNEHDLISWNSL 444
Query: 533 LGACRIHGNVEMGERIADALMKME 556
L C HG GE D KM
Sbjct: 445 LSGCAYHG---CGEEAIDLFEKMR 465
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 214/657 (32%), Positives = 338/657 (51%), Gaps = 35/657 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++ Y SG A +F + + + +W ++ ++ DALS M GV+ D
Sbjct: 295 LSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDR 354
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT +T L+ G LH +KFGLD+ V+V N L+ Y + G L ARRVF E
Sbjct: 355 VTVTTVLNL----PGCTVP-SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLE 409
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +KD+V++NA++ G +++G + +A+ M R G L L
Sbjct: 410 MHDKDAVTYNAMMMGCSKEGLH-TQALQLFAAMRRAGYS---------------RHPLHL 453
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
+ H S +V V N L+ YSKC+ D ++F M +R+ +S+ +I+
Sbjct: 454 LQYSHSRSRSTSV-LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 512
Query: 235 NREDA--VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N+ A + LF+EM+ G + + ++ V G+ IH + SE +
Sbjct: 513 NQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLL 572
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI MY++ + ++ F S + ISW ALI+GY QNG A+Q F + +
Sbjct: 573 GNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGL 632
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ TF S++ A + I L G++ HS++I+ G S GS L+DMY K G + E+
Sbjct: 633 RPDRATFSSIIKASSSLAMIGL--GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEA 690
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
R F+E E++ +W A+ISA A +G+ ++ + F+ M + G PDS+TFLSVL C N
Sbjct: 691 LRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHN 750
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G+ + F M Y I P +HY+C++D LGRVG + ++++ ++P + S
Sbjct: 751 GLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 810
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
+L +CRIHGN E+ AD L MEP + YV++SN+YA G WE A ++K M+ +GV
Sbjct: 811 ILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGV 870
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
RKE G+SW ++ ++ F+S D T P +EI + L EM K + AL
Sbjct: 871 RKESGYSWVEIK--QKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCAL 925
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 137/293 (46%), Gaps = 27/293 (9%)
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVC 252
N+++S YS A +F RN +WT M+ + DA+SLF+ M +GV
Sbjct: 292 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 351
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ VT +++ G V +H IK + VCN L+ Y + + + +V
Sbjct: 352 PDRVTVTTVLNL--PGCTVPS---LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 406
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDIS 372
F E+ ++ +++NA++ G ++ GL A+Q F ++ + + + +
Sbjct: 407 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQ-LFAAMRRAGYSRHPL----------HLLQ 455
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
H + + ++ V V ++LLD Y K + + +R+F+E E+ ++ II+A
Sbjct: 456 YSHSRSRSTSVLNV------FVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAA 509
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
A + +V+ F+EM+ G + + ++L+V G +H G+ + ++
Sbjct: 510 YAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLV 562
>gi|57899214|dbj|BAD87363.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222619954|gb|EEE56086.1| hypothetical protein OsJ_04925 [Oryza sativa Japonica Group]
Length = 566
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 300/535 (56%), Gaps = 13/535 (2%)
Query: 78 QLHSLIVKFGLD-SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
Q H+ K G S + AL+ Y R RL EA+ +FD+MP + +V+WN ++ G+ Q
Sbjct: 32 QCHAAATKLGFSASNPFANTALLAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHAQS 91
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
+ A+ A M+R G+ S +S AC +N G +H V ++ G+ V V
Sbjct: 92 TAPDL-AVAAFARMVRAGVSPTASSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVV 150
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGV 251
G L+ Y+KC G A +VF M ++NV ++T ++ S DAV L +EM GV
Sbjct: 151 GTALVDMYAKCRRLGAAQQVFGEMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGV 210
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
PN +T+ L+ + + + G+ +H +K +P V + L+TMY++ +D K
Sbjct: 211 APNLMTYSSLLSSFASPEDIDHGKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVK 270
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAED 370
V +SC++ +S+N++ISG + G A Q F + + + + +TF S+L A+G++
Sbjct: 271 VQMSVSCQDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSS- 329
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
SL G++ H+ I+K+G DS V ++L+ MY + G+I ES VF + + +W +++
Sbjct: 330 -SLLEGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLM 388
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML-KDYH 489
S A+HG + V+ F++M V+PD ITFLSVLT C G++ KG F+ M K Y
Sbjct: 389 SGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGYL 448
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
+ HY+CMVD+LGR G L EAE L+ +P PG SV ++LL AC+IHGN+E+ R++
Sbjct: 449 VGARTKHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIAIRVS 508
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
LM++ P S +V +SN +A G W A +R+ M KG+ KE SW+ + D
Sbjct: 509 KRLMELNPHDSSVHVQLSNAFAGDGRWGNAAEIRETMSGKGIVKEP--SWSRIED 561
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 239/472 (50%), Gaps = 37/472 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ YC+S + +A +F+ + V+WNT++ G +S D A++ RM GV A
Sbjct: 54 LAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHAQSTAPDLAVAAFARMVRAGVSPTA 113
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S+ L C+ E G LHS+ ++ G + V VG AL+ MY++ RL A++VF E
Sbjct: 114 SSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVVGTALVDMYAKCRRLGAAQQVFGE 173
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ ++ A+++G+ +A+L + EM R G+ + ++++S S+ ++++
Sbjct: 174 MEEKNVATFTALVTGFVLS-RRPHDAVLLVREMERSGVAPNLMTYSSLLSSFASPEDIDH 232
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+H +K G V + L++ YSKC + D KV + ++ +S+ ++IS
Sbjct: 233 GKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLSC 292
Query: 234 MNR-EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ R ++A F EMR G + TF ++ AI + + EGR +H L +K + S V
Sbjct: 293 LGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDV 352
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ES 351
N LI+MYAR ++ +S VF + ++SWN+L+SG AQ+G V+ F + +
Sbjct: 353 QNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHV 412
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-------DSDPIVG------SAL 398
+P+ TF SVL A H ++ GL D +VG + +
Sbjct: 413 QPDHITFLSVLTACS-------------HVGLVDKGLEYFNLMKDKGYLVGARTKHYACM 459
Query: 399 LDMYGKRGSIFESQRVFNETQEKS-EFAWTAIISALARHGDYESVMNQFKEM 449
+D+ G+ G + E++ + N K + A++SA HG+ E + K +
Sbjct: 460 VDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIAIRVSKRL 511
>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 221/670 (32%), Positives = 365/670 (54%), Gaps = 34/670 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD------DALSFALRMNLIGVV 54
+NMY S Q + AL +F+ + ++V+WNT++ F K + +A + + +++
Sbjct: 163 LNMYA-SCQHEYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSP 221
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNALITMYSRWGRLVEAR 112
V ALS D + + KFG S+V+V ++ I M+S G + AR
Sbjct: 222 VTFVNLFPALSKLGDSRTVKM---FYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYAR 278
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR--KGLRLDHVSFTSAASACG 170
VFD NK++ WN ++ Y Q+ + VEAI I+ + +G+ D V+ S +A
Sbjct: 279 MVFDRCLNKNTEIWNTMIVAYVQN-NCPVEAIDVFIQALESEEGV-CDDVTLLSVLTAVS 336
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ ++L +Q H IK G+ + + N +M YS+C + KVF +M +R+ +SW T
Sbjct: 337 QLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNT 396
Query: 231 MISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+IS E+A+ L EM+ + VT L+ A S + G+ H I+
Sbjct: 397 IISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRG 456
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSC---REIISWNALISGYAQNGLSLAAVQ 342
E + + LI MYA+ S++ +E +F++ +C R+ +WNA+I+GY QNGL+ A+
Sbjct: 457 IQFE-GMESYLIDMYAKSGSIRTAELLFEQ-NCSSDRDQATWNAIIAGYTQNGLNEKAIL 514
Query: 343 AFFG-VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
+++ PNA T S+L A + + L ++ H I+ L+ + VG++L D
Sbjct: 515 LLKQMLVQNVIPNAVTLASILPACSSMGSMGL--ARQLHGFSIRRFLEKNVYVGTSLTDT 572
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K G+I ++ VF T EK+ +T ++ +HG + + + M G+RPD++TF
Sbjct: 573 YSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTF 632
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV-GQI 520
+++L+ C +G++ +G +F+SM K + I+PS +HY C+ DMLGRVGR+ EA E V G
Sbjct: 633 VAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLG 692
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADAL--MKMEPAGSGSYVLMSNLYAEKGDWEM 578
+ + SLLG+CR HG+ E+G+ +A L M M+ +G +VL+SN+YAE+G+WE
Sbjct: 693 EDANTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEK 752
Query: 579 VAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
V +RK MK KG+ KE G SW ++ ++ F S D HP+S EIY M + L +MKY
Sbjct: 753 VDRVRKQMKEKGLHKETGCSWVEIAGF--VNCFVSRDEKHPQSSEIYYMLDMLTLDMKYA 810
Query: 639 NSKRERAIAL 648
K + ++ L
Sbjct: 811 GYKPQYSLNL 820
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 148/566 (26%), Positives = 264/566 (46%), Gaps = 36/566 (6%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-----EKSDDALSFALRMNLIGVVFDAVT 59
C+ GQ AL + ++L P V WN+V+ GF L +R N FD T
Sbjct: 60 CREGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYT 119
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEV----YVGNALITMYSRWGRLVEARRVF 115
+S+ L C + L G +HS ++ ++ V N+L+ MY+ A VF
Sbjct: 120 FSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQHEY-ALNVF 178
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D M ++ V+WN ++ + + Y +A+ A M+ + + V+F + A +
Sbjct: 179 DVMRRRNVVAWNTLILSFVKMNRYP-QAVEAFANMINQSVMPSPVTFVNLFPALSKLGDS 237
Query: 176 ELGKQIHGVSIKMG--YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
K +G K G Y + V V + + +S A VF R ++N W TMI
Sbjct: 238 RTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIV 297
Query: 234 MNRE-----DAVSLFKEM--RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+ +A+ +F + +GVC +DVT + ++ A+S +K H IK+
Sbjct: 298 AYVQNNCPVEAIDVFIQALESEEGVC-DDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLP 356
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S + N ++ MY+R + S KVFD++ R+ +SWN +IS + QNG A+
Sbjct: 357 GSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALM---- 412
Query: 347 VIKESKPNAYTFGSVLNA--VGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
++ E + + SV + AA ++ +L G++ H+++I+ G+ + + S L+DMY
Sbjct: 413 LVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGM-ESYLIDMYA 471
Query: 404 KRGSIFESQRVF--NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
K GSI ++ +F N + ++ + W AII+ ++G E + K+M + V P+++T
Sbjct: 472 KSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTL 531
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
S+L C G + R L ++ + +E + + + D + G + AE + + P
Sbjct: 532 ASILPACSSMGSMGLARQLHGFSIRRF-LEKNVYVGTSLTDTYSKCGAISYAENVFLRTP 590
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGER 547
SV + + C +G MG+R
Sbjct: 591 EKN--SVTYTTMMMC--YGQHGMGKR 612
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 219/715 (30%), Positives = 343/715 (47%), Gaps = 74/715 (10%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTY 60
Y G AL + + V WN ++ + D A+ + RM G D T
Sbjct: 93 YLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTL 152
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
AL C + + G H LI G +S V+V NAL+ MYSR G L +A VFDE+
Sbjct: 153 PYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITR 212
Query: 121 K---DSVSWNAILSGYTQDGDYGV-----EAILALIEMMRKGLRLDHVSFTSAASACGHE 172
K D +SWN+I++ + + + + ++ R D +S + AC
Sbjct: 213 KGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASL 272
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
K L K+IH +I+ G V N L+ TY+KC DA VF M ++V+SW M+
Sbjct: 273 KALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMV 332
Query: 233 S-----------------MNRE-----------------------DAVSLFKEMRLDGVC 252
+ M +E +A+ F++M L G
Sbjct: 333 TGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSE 392
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS------------VCNCLITMY 300
PN VT I L+ A + + +G H +K LS + V N LI MY
Sbjct: 393 PNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMY 452
Query: 301 ARFESMQDSEKVFDELSCRE--IISWNALISGYAQNGLSLAAVQAFFGVIKES---KPNA 355
++ S + + +F+ + RE +++W +I GYAQ G S A++ F +I + PNA
Sbjct: 453 SKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNA 512
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI--VGSALLDMYGKRGSIFESQR 413
YT +L A A SL+ G++ H+++ + + V + L+DMY K G + ++
Sbjct: 513 YTISCILMA--CAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARN 570
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF+ +++E +WT+++S HG + ++ F +M+ G PD I+FL +L C +GM
Sbjct: 571 VFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGM 630
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ +G FD M DY + S HY+C++D+L R GRL++A + + ++P P ++ +LL
Sbjct: 631 VDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALL 690
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
ACR+H NVE+ E + L+ M+ GSY L+SN+YA W+ VA +R+ MK G++K
Sbjct: 691 SACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKK 750
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
G SW V G F GD +HP S EIY + E L +K + E AL
Sbjct: 751 RPGCSW--VQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFAL 803
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 140/569 (24%), Positives = 249/569 (43%), Gaps = 94/569 (16%)
Query: 78 QLHSLIVKFGL---------------DSEVYV-----GNALITMYSRWGRLVEARRVFDE 117
Q+H I+ +GL S YV G ++ Y G +A V +
Sbjct: 49 QIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVASYLACGATSDALSVLER 108
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +V WN ++ + ++G AI M+R G + DH + A ACG +
Sbjct: 109 VVPSPAVWWNLLVRAHIEEGRLD-RAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRS 167
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR---NVISWTTMISM 234
G HG+ G+ ++V V N L++ YS+ DA+ VF + + +VISW ++++
Sbjct: 168 GSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAA 227
Query: 235 -----NREDAVSLFKEM------RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
N A+ LF EM + + ++ + ++ A + + + + IH I+
Sbjct: 228 HVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIR 287
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
++ VCN LI YA+ SM+D+ VF+ + ++++SWNA+++GY Q+G AA +
Sbjct: 288 NGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFEL 347
Query: 344 FFGVIKE------------------------------------SKPNAYTFGSVLNAVGA 367
F + KE S+PN+ T S+L+A +
Sbjct: 348 FKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACAS 407
Query: 368 AEDISLKHGQRCHSHIIKVGLDS------------DPIVGSALLDMYGKRGSIFESQRVF 415
+L G H++ +K L S D +V +AL+DMY K S ++ +F
Sbjct: 408 LG--ALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIF 465
Query: 416 NET--QEKSEFAWTAIISALARHGDYESVMNQFKEMENK--GVRPDSITFLSVLTVCGRN 471
N +E++ WT +I A++GD + F EM +K V P++ T +L C
Sbjct: 466 NSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHL 525
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYS-CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+ G+ + + + + E S + C++DM + G ++ A + +P +S
Sbjct: 526 SSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVS-WT 584
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAG 559
S++ +HG G+ D KM+ AG
Sbjct: 585 SMMSGYGMHGR---GKEALDIFDKMQKAG 610
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 142/556 (25%), Positives = 234/556 (42%), Gaps = 105/556 (18%)
Query: 3 MYCKSGQFDKALCIFNNLNNP---DIVSWNTVLSGFEK-SDDALSFALRMNLIGVVF--- 55
MY +SG + A +F+ + D++SWN++++ K S+ + L + +V
Sbjct: 193 MYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKA 252
Query: 56 -----DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
D ++ L C + ++HS ++ G ++ +V NALI Y++ G + +
Sbjct: 253 TNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKD 312
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGD-------------------------------- 138
A VF+ M KD VSWNA+++GYTQ G
Sbjct: 313 AVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQ 372
Query: 139 --YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK--------- 187
YG EA+ +M+ G + V+ S SAC L G + H S+K
Sbjct: 373 RGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDND 432
Query: 188 ---MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISWTTMIS-----MNRE 237
G G + V N L+ YSKC A +F + +RNV++WT MI +
Sbjct: 433 FGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSN 492
Query: 238 DAVSLFKEM--RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS--VC 293
DA+ LF EM + V PN T ++ A + + ++ G+ IH + + V
Sbjct: 493 DALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVA 552
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
NCLI MY++ + + VFD + R +SW +++SGY +G A+ F + K
Sbjct: 553 NCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFV 612
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS------------ALLD 400
P+ +F +L A HS ++ GLD I+ S ++D
Sbjct: 613 PDDISFLVLLYACS-------------HSGMVDQGLDYFDIMRSDYGVIASAQHYACVID 659
Query: 401 MYGKRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGDY---ESVMNQFKEM--ENKGV 454
+ + G + ++ + E E S W A++SA H + E +N+ M EN G
Sbjct: 660 LLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDG- 718
Query: 455 RPDSITFLSVLTVCGR 470
S T +S + R
Sbjct: 719 ---SYTLISNIYATAR 731
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 10/187 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNL--NNPDIVSWNTVLSGFEK---SDDALSFALRM--NLIGV 53
++MY K F A IFN++ ++V+W ++ G+ + S+DAL M V
Sbjct: 449 IDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAV 508
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVY-VGNALITMYSRWGRLVEA 111
+A T S L C G Q+H+ + + +S VY V N LI MYS+ G + A
Sbjct: 509 APNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTA 568
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
R VFD MP ++ VSW +++SGY G G EA+ +M + G D +SF AC H
Sbjct: 569 RNVFDSMPKRNEVSWTSMMSGYGMHGR-GKEALDIFDKMQKAGFVPDDISFLVLLYACSH 627
Query: 172 EKNLELG 178
++ G
Sbjct: 628 SGMVDQG 634
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 195/544 (35%), Positives = 303/544 (55%), Gaps = 24/544 (4%)
Query: 112 RRVFDEMPNKDSV-SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
R +F + +K SV SWN+I++ + + GD ++A+ A M + L + +F +C
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGD-SLQALYAFSSMRKLSLHPNRSTFPCTIKSCS 97
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+L GKQIH + GYG+ + V + L+ YSKC DA K+F + +RNV+SWT+
Sbjct: 98 SLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTS 157
Query: 231 MIS-----MNREDAVSLFKEMRL----------DGVCPNDVTFIGLIHAISIGNLVKE-G 274
MIS +AV LFKE L D +G + + VK
Sbjct: 158 MISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVT 217
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
+HGL +K F +V N L+ YA+ + S KVFD + ++ SWN+LI+ YAQN
Sbjct: 218 ECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQN 277
Query: 335 GLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
GLS+ A F ++K E + NA T +VL + A +L+ G+ H ++K+ L+ +
Sbjct: 278 GLSVEAFSLFSDMVKRGEVRYNAVTLSAVL--LACAHSGALQIGKCIHDQVVKMELEDNL 335
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
+VG++++DMY K G + +++ F+ + K+ +WT +++ HG + M F EM
Sbjct: 336 VVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRC 395
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
G++P+ ITF+SVL C G++ +G H F+ M ++ +EP +HYSCMVD+LGR G L+E
Sbjct: 396 GIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKE 455
Query: 513 AEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAE 572
A L+ ++ P V SLLGACRIH NVE+GE A L K++P+ G YVL+SN+YA+
Sbjct: 456 AYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYAD 515
Query: 573 KGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLG 632
G W+ V +R MK+ G+ K G+S V +H F GD HP+ E+IY + L
Sbjct: 516 AGRWDDVERMRILMKNHGLLKTPGYSI--VEHKGRVHVFLVGDKEHPQHEKIYEYLDELN 573
Query: 633 SEMK 636
+++
Sbjct: 574 VKLQ 577
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 223/445 (50%), Gaps = 28/445 (6%)
Query: 20 LNNPDIVSWNTVLSGFEKSDDALS--FALR-MNLIGVVFDAVTYSTALSFCLDHEGFLFG 76
++ + SWN++++ F +S D+L +A M + + + T+ + C G
Sbjct: 46 VDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAG 105
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
Q+H FG S+++V +ALI MYS+ G L +AR++FDE+P ++ VSW +++SGY Q+
Sbjct: 106 KQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQN 165
Query: 137 GDYGVEAILALIEMM-----------RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVS 185
+ EA+ E + G+ +D V SAC + + +HG++
Sbjct: 166 -ERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLA 224
Query: 186 IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAV 240
+K G+ ++VGN LM Y+KC + KVF M + +V SW ++I++ + +A
Sbjct: 225 VKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAF 284
Query: 241 SLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
SLF +M G V N VT ++ A + ++ G+ IH +K V ++ M
Sbjct: 285 SLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDM 344
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
Y + ++ + K FD L + + SW +++GY +G A++ F+ +I+ KPN TF
Sbjct: 345 YCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITF 404
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIFESQRVFN 416
SVL A A LK G + +K D +P + S ++D+ G+ G + E+ +
Sbjct: 405 VSVLAACSHAG--LLKEGWHWFNK-MKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQ 461
Query: 417 ETQEKSEF-AWTAIISALARHGDYE 440
E + K +F W +++ A H + E
Sbjct: 462 EMKVKPDFIVWGSLLGACRIHKNVE 486
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 177/352 (50%), Gaps = 27/352 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++MY K G + A +F+ + ++VSW +++SG+ +++ A +V D Y
Sbjct: 128 IDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLV-DETDY 186
Query: 61 STALSFCLDHEGFLFGLQL---------------HSLIVKFGLDSEVYVGNALITMYSRW 105
+ + + L G + H L VK G + + VGN L+ Y++
Sbjct: 187 DEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKC 246
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTS 164
G + +R+VFD M D SWN++++ Y Q+G VEA +M+++G +R + V+ ++
Sbjct: 247 GEISVSRKVFDGMEETDVCSWNSLIAVYAQNG-LSVEAFSLFSDMVKRGEVRYNAVTLSA 305
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
AC H L++GK IH +KM ++ VG ++ Y KC A K F R+ +N
Sbjct: 306 VLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKN 365
Query: 225 VISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
V SWT M++ + ++A+ +F EM G+ PN +TF+ ++ A S L+KEG
Sbjct: 366 VKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFN 425
Query: 280 LCIKTNFLSEPSV--CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALI 328
+K F EP + +C++ + R ++++ + E+ + + I W +L+
Sbjct: 426 K-MKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLL 476
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 198/622 (31%), Positives = 335/622 (53%), Gaps = 18/622 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+++Y G+ D A +F+ + +PD +SW ++ + + D + F RM + D
Sbjct: 44 VSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDN 103
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V +S L C + F G ++H IVKFG + + +V L+ MY++ G + +R VFDE
Sbjct: 104 VVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDE 162
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+++ SW+++++GY Q+ + + ++ M + + + ++ AC L
Sbjct: 163 NLDRNVFSWSSMIAGYVQN-NLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQ 221
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
GK +HG IK G + L+ Y+KC V DA VF +H +++SWT MI +
Sbjct: 222 GKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQ 281
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N E+A+ LF + V PNDVT + + S + GR IHGL IK +P V
Sbjct: 282 NGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGS-RDPIV 340
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
N L+ YA+ + +D+ VF+ +S R++++WN++IS ++QNG + A++ F + +
Sbjct: 341 TNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSV 400
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-DSDPIVGSALLDMYGKRGSIFE 410
P+A T SVL+A + +L+ G H++ +K GL S+ VG+ALL Y K G
Sbjct: 401 LPDAVTLVSVLSACASLN--ALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAES 458
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F+ +KS W+A+IS G+ ++ F +M ++P+ F S+L+ C
Sbjct: 459 ARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSH 518
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
GMI +G LF + +DY++ PS HY+CMVD+L R GRL+EA + + ++P P +S+
Sbjct: 519 TGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFG 578
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+ L C +H ++GE ++++ P + YVLM NLYA W V +R+ MK +G
Sbjct: 579 AFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRG 638
Query: 591 VRKEVGFSWADVGDIDGLHGFS 612
+ K G S ++ D+D H FS
Sbjct: 639 LMKTPGCSLMEM-DVD--HDFS 657
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 210/410 (51%), Gaps = 17/410 (4%)
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
+++H+ +V GL ++ L+++Y +GRL AR VFD +P+ D +SW I+ Y +
Sbjct: 22 MEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLN 81
Query: 137 GDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
++ I+ MR L+ D+V F+ AC +N + G+++H +K G
Sbjct: 82 SEF--RDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSF 138
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNR--EDAVSLFKEMRLDG 250
V L+ Y+KC + VF DRNV SW++MI+ N +D + LF MR +
Sbjct: 139 VFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREEL 198
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
+ N +T L+HA + +G+ +HG IK + L+ +YA+ ++D+
Sbjct: 199 IEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDAR 258
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK---PNAYTFGSVLNAVGA 367
VFDEL +I+SW A+I GY QNG A++ F KE PN T SV ++
Sbjct: 259 SVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQ--KEQVAVLPNDVTIASVFSS--C 314
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
++ ++L G+ H IK+G DPIV ++L+D Y K +++ VF ++ AW
Sbjct: 315 SQLLNLNLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWN 373
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
+IISA +++G + F +M V PD++T +SVL+ C + G
Sbjct: 374 SIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVG 423
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H++++ GL D + L+ +YG G + ++ VF+ +W II + ++
Sbjct: 25 HAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEF 84
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC 499
++ + M D++ F VL C + +GR + ++K P ++
Sbjct: 85 RDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVK--FGNPDSFVFTG 142
Query: 500 MVDMLGRVGRLE 511
+VDM + G +E
Sbjct: 143 LVDMYAKCGEIE 154
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 208/662 (31%), Positives = 326/662 (49%), Gaps = 69/662 (10%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
G D T L C + + G H LI G +S V++ NAL+ MYSR G L EA
Sbjct: 5 GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 64
Query: 112 RRVFDEMPNK---DSVSWNAILSGYTQDGDYGV-----EAILALIEMMRKGLRLDHVSFT 163
+FDE+ + D +SWN+I+S + + + + ++ R D +S
Sbjct: 65 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 124
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
+ ACG K + K++HG +I+ G V VGN L+ Y+KC + +A KVF M +
Sbjct: 125 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 184
Query: 224 NVISWTTMIS-----------------MNRE-----------------------DAVSLF 243
+V+SW M++ M +E +A+++F
Sbjct: 185 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 244
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS----------EPSVC 293
++M G PN VT I ++ A + +G IH +K L+ + V
Sbjct: 245 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 304
Query: 294 NCLITMYARFESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
N LI MY++ S + + +FD++ R +++W +I G+AQ G S A++ F +I E
Sbjct: 305 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 364
Query: 352 ---KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDP-IVGSALLDMYGKRG 406
PNAYT +L A A +++ G++ H+++++ DS V + L++MY K G
Sbjct: 365 YGVAPNAYTISCILMA--CAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCG 422
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ ++ VF+ +KS +WT++++ HG ++ F +M G PD ITFL VL
Sbjct: 423 DVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLY 482
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C GM+ +G FDSM DY + P +HY+ +D+L R GRL++A + V +P P
Sbjct: 483 ACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTA 542
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +LL ACR+H NVE+ E + L++M GSY L+SN+YA G W+ VA +R M
Sbjct: 543 VVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLM 602
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAI 646
K G++K G SW V G F GD +HP S +IY + E L +K + E
Sbjct: 603 KKSGIKKRPGCSW--VQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNF 660
Query: 647 AL 648
AL
Sbjct: 661 AL 662
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 151/557 (27%), Positives = 245/557 (43%), Gaps = 88/557 (15%)
Query: 3 MYCKSGQFDKALCIFNNLNN---PDIVSWNTVLSGFEKSDDA---LSFALRMNLI----- 51
MY + G ++A IF+ + D++SWN+++S KS +A L +M LI
Sbjct: 54 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 113
Query: 52 -GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
D ++ L C + ++H ++ G +V+VGNALI Y++ G +
Sbjct: 114 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMEN 173
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFT------ 163
A +VF+ M KD VSWNA+++GY+Q G++ +A L + MRK + LD V++T
Sbjct: 174 AVKVFNMMEFKDVVSWNAMVAGYSQSGNF--KAAFELFKNMRKENIPLDMVTWTAVIAGY 231
Query: 164 -----------------------------SAASACGHEKNLELGKQIHGVSIKM------ 188
S SAC G +IH S+K
Sbjct: 232 SQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLD 291
Query: 189 ----GYGTHVSVGNVLMSTYSKCEVTGDANKVFR--RMHDRNVISWTTMISMNRE----- 237
G + V N L+ YSKC A +F + +RNV++WT MI + +
Sbjct: 292 NDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSN 351
Query: 238 DAVSLFKEMRLD--GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS--VC 293
DA+ LF EM + GV PN T ++ A + ++ G+ IH ++ + + V
Sbjct: 352 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVA 411
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
NCLI MY++ + + VFD +S + ISW ++++GY +G A+ F + K
Sbjct: 412 NCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV 471
Query: 353 PNAYTFGSVLNAVG--AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ TF VL A D L + S GL + +D+ + G + +
Sbjct: 472 PDDITFLVVLYACSHCGMVDQGLSYFD---SMSADYGLTPRAEHYAYAIDLLARFGRLDK 528
Query: 411 SQRVFNE-TQEKSEFAWTAIISALARHGDY---ESVMNQFKEM--ENKGVRPDSITFLS- 463
+ + + E + W A++SA H + E +N+ EM EN G S T +S
Sbjct: 529 AWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDG----SYTLISN 584
Query: 464 VLTVCGRNGMIHKGRHL 480
+ GR + + RHL
Sbjct: 585 IYATAGRWKDVARIRHL 601
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 212/475 (44%), Gaps = 71/475 (14%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M+R G RLDH + ACG + G HG+ G+ ++V + N L++ YS+C
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 210 TGDANKVFRRMHDR---NVISWTTMISM-----NREDAVSLFKEMRL------DGVCPND 255
+A+ +F + R +VISW +++S N A+ LF +M L +
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
++ + ++ A V + + +HG I+ + V N LI YA+ M+++ KVF+
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE------------------------- 350
+ ++++SWNA+++GY+Q+G AA + F + KE
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 351 -----------SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV----------GLD 389
S PN T SVL+A + S G H++ +K G D
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFS--QGMEIHAYSLKNCLLTLDNDFGGED 298
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNET--QEKSEFAWTAIISALARHGDYESVMNQFK 447
D +V +AL+DMY K S ++ +F++ +E++ WT +I A++GD + F
Sbjct: 299 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 358
Query: 448 EM--ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS-CMVDML 504
EM E GV P++ T +L C I G+ + +L+ + + S + C+++M
Sbjct: 359 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMY 418
Query: 505 GRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+ G ++ A + + +S S++ +HG G D KM AG
Sbjct: 419 SKCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGR---GSEALDIFDKMRKAG 469
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 1 MNMYCKSGQFDKALCIFNN--LNNPDIVSWNTVLSG---FEKSDDALSFALRM--NLIGV 53
++MY K F A IF++ L ++V+W ++ G + S+DAL + M GV
Sbjct: 308 IDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGV 367
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKF-GLDSEVY-VGNALITMYSRWGRLVEA 111
+A T S L C G Q+H+ +++ DS Y V N LI MYS+ G + A
Sbjct: 368 APNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTA 427
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
R VFD M K ++SW ++++GY G G EA+ +M + G D ++F AC H
Sbjct: 428 RHVFDSMSQKSAISWTSMMTGYGMHGR-GSEALDIFDKMRKAGFVPDDITFLVVLYACSH 486
>gi|218189824|gb|EEC72251.1| hypothetical protein OsI_05387 [Oryza sativa Indica Group]
Length = 566
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 300/535 (56%), Gaps = 13/535 (2%)
Query: 78 QLHSLIVKFGLD-SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
Q H+ K G S + AL+ Y R RL EA+ +FD+MP + +V+WN ++ G+ Q
Sbjct: 32 QCHAAATKLGFSASNPFANTALLAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHAQS 91
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
+ A+ A M+R G+ S +S AC +N G +H V ++ G+ V V
Sbjct: 92 TAPDL-AVAAFARMVRAGVSPTASSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVV 150
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGV 251
G L+ Y+KC G A +VF M ++NV ++T ++ S DAV L +EM GV
Sbjct: 151 GTALVDMYAKCRRLGAAQQVFGEMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGV 210
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
PN +T+ L+ + + + G+ +H +K +P V + L+TMY++ +D K
Sbjct: 211 APNLMTYSSLLSSFASPEDIDHGKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVK 270
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAED 370
V +SC++ +S+N++ISG + G A Q F + + + + +TF S+L A+G++
Sbjct: 271 VQMSVSCQDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSS- 329
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
SL G++ H+ I+K+G DS V ++L+ MY + G+I ES VF + + +W +++
Sbjct: 330 -SLLEGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLM 388
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML-KDYH 489
S A+HG + V+ F++M V+PD ITFLSVLT C G++ KG F+ M K Y
Sbjct: 389 SGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGYL 448
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
+ HY+CMVD+LGR G L EAE L+ +P PG SV ++LL AC+IHGN+E+ R++
Sbjct: 449 VGARTKHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIAIRVS 508
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
LM++ P S +V +SN +A G W A +R+ M KG+ KE SW+ + D
Sbjct: 509 KRLMELNPHDSSVHVQLSNAFAGDGRWGNAAEIRETMSGKGIVKEP--SWSRIED 561
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 239/472 (50%), Gaps = 37/472 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ YC+S + +A +F+ + V+WNT++ G +S D A++ RM GV A
Sbjct: 54 LAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHAQSTAPDLAVAAFARMVRAGVSPTA 113
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S+ L C+ E G LHS+ ++ G + V VG AL+ MY++ RL A++VF E
Sbjct: 114 SSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVVGTALVDMYAKCRRLGAAQQVFGE 173
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ ++ A+++G+ +A+L + EM R G+ + ++++S S+ ++++
Sbjct: 174 MEEKNVATFTALVTGFVLS-RRPHDAVLLVREMERSGVAPNLMTYSSLLSSFASPEDIDH 232
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+H +K G V + L++ YSKC + D KV + ++ +S+ ++IS
Sbjct: 233 GKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLSC 292
Query: 234 MNR-EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ R ++A F EMR G + TF ++ AI + + EGR +H L +K + S V
Sbjct: 293 LGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDV 352
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ES 351
N LI+MYAR ++ +S VF + ++SWN+L+SG AQ+G V+ F + +
Sbjct: 353 QNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHV 412
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-------DSDPIVG------SAL 398
+P+ TF SVL A H ++ GL D +VG + +
Sbjct: 413 QPDHITFLSVLTACS-------------HVGLVDKGLEYFNLMKDKGYLVGARTKHYACM 459
Query: 399 LDMYGKRGSIFESQRVFNETQEKS-EFAWTAIISALARHGDYESVMNQFKEM 449
+D+ G+ G + E++ + N K + A++SA HG+ E + K +
Sbjct: 460 VDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIAIRVSKRL 511
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 208/646 (32%), Positives = 344/646 (53%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y K G +A +F +NN DIVSW ++S F ++ AL RM GV +
Sbjct: 158 IDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNE 217
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L+ G +G +H+ ++ + ++ + + AL+ MY + + +A +V
Sbjct: 218 FTFVKLLA-ASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKL 276
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
D W AI+SG+TQ + EAI A EM G+ ++ +++ +AC L+L
Sbjct: 277 TLEYDVFLWTAIISGFTQSLKFR-EAITAFHEMETSGVVPNNFTYSGILNACSSILALDL 335
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE-VTGDANKVFRRMHDRNVISWTTMISMN- 235
GKQIH + G VSVGN L+ Y KC + DA + FR + NVISWT++I+
Sbjct: 336 GKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFS 395
Query: 236 ----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E+++ +F M+ GV PN T ++ A + + R +HG IK N ++
Sbjct: 396 EHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVV 455
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L+ YA + D+ V + R++I++ +L + Q G A+ + K+
Sbjct: 456 VGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDD 515
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + ++ S L+A AA ++ G++ H + +K GL S V + L+D+YGK G I +
Sbjct: 516 VRMDGFSLASFLSA--AAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHD 573
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ R F E E +W +I LA +G S ++ F++M GV PD IT L VL C
Sbjct: 574 AHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSH 633
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ G F SM + + I P DHY C+VD+LGR GRLEEA ++ +P P + +
Sbjct: 634 GGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYK 693
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGAC++HGN+ +GE +A ++++P+ YVL++NLY + G E+ R+ M+ +G
Sbjct: 694 TLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERG 753
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
VRK G SW + ++ +H F++GD +HP+ +I+ E L ++ +
Sbjct: 754 VRKNPGQSWMEERNM--VHLFTAGDTSHPQIGKIHEKIESLIAQFR 797
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 231/435 (53%), Gaps = 20/435 (4%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
+SFC + G+ +HS I+K G ++++ N L+++Y + + EAR++FDEMP +D
Sbjct: 23 VSFC-NSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDV 81
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
SW ++S Y + G++ EA+ M+ G + + ++A +C + G +
Sbjct: 82 ASWTMLMSAYGKIGNHE-EALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQA 140
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----D 238
+ K G+ ++ +G+ L+ YSKC T +A +VF M++ +++SWT M+S E
Sbjct: 141 LVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQ 200
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
A+ L+ M GV PN+ TF+ L+ A S L G+++H + + L+
Sbjct: 201 ALQLYHRMIQTGVAPNEFTFVKLLAASSFLGL-NYGKLVHAHLMMWRIELNLVLKTALVD 259
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF-----GVIKESKP 353
MY + +S++D+ KV ++ W A+ISG+ Q+ A+ AF GV+ P
Sbjct: 260 MYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVV----P 315
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE-SQ 412
N +T+ +LNA + ++L G++ HS ++ GL++D VG++L+DMY K ++ E +
Sbjct: 316 NNFTYSGILNACSSI--LALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAV 373
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
R F + +WT++I+ + HG E + F M+ GVRP+S T ++L CG
Sbjct: 374 RAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIK 433
Query: 473 MIHKGRHLFDSMLKD 487
+ + R L ++K+
Sbjct: 434 SLTQTRKLHGYIIKN 448
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 249/491 (50%), Gaps = 16/491 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+++Y K +A +F+ + D+ SW ++S + K ++AL M + G +
Sbjct: 57 LSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNE 116
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T STAL C F G + +L+ K G DS +G+ALI YS+ G EA RVF+
Sbjct: 117 FTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEY 176
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M N D VSW ++S + + G + +A+ M++ G+ + +F +A L
Sbjct: 177 MNNGDIVSWTMMVSSFVEAGSWS-QALQLYHRMIQTGVAPNEFTFVKLLAASSF-LGLNY 234
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GK +H + ++ + L+ Y KC+ DA KV + + +V WT +I
Sbjct: 235 GKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQ 294
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S+ +A++ F EM GV PN+ T+ G+++A S + G+ IH + ++ SV
Sbjct: 295 SLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSV 354
Query: 293 CNCLITMYARFESM-QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-- 349
N L+ MY + +M +D+ + F ++ +ISW +LI+G++++GL +++ FG ++
Sbjct: 355 GNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKV-FGAMQGV 413
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+PN++T ++L A G + SL ++ H +IIK D+D +VG+AL+D Y G +
Sbjct: 414 GVRPNSFTLSTILGACGTIK--SLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVD 471
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ V + + + +T++ + + + G++E +N M VR D + S L+
Sbjct: 472 DAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAA 531
Query: 470 RNGMIHKGRHL 480
++ G+ L
Sbjct: 532 GIPIMETGKQL 542
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 132/264 (50%), Gaps = 7/264 (2%)
Query: 253 PNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
P+ + + L +S N V++G IH IK F + + N L+++Y + + ++
Sbjct: 11 PSKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEAR 70
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTFGSVLNAVGAAE 369
++FDE+ CR++ SW L+S Y + G A++ F +I PN +T + L + A
Sbjct: 71 QLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALR 130
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+ HG R + + K G DS+P++GSAL+D Y K G E+ RVF +WT +
Sbjct: 131 E--FNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMM 188
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
+S+ G + + + M GV P+ TF+ +L G+ + G+ L + L +
Sbjct: 189 VSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGL-NYGK-LVHAHLMMWR 246
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEA 513
IE + + +VDM + +E+A
Sbjct: 247 IELNLVLKTALVDMYCKCQSIEDA 270
>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 820
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 216/664 (32%), Positives = 365/664 (54%), Gaps = 39/664 (5%)
Query: 1 MNMY--CKSG----QFDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNL 50
MNMY C + ++D +F+N+ ++V+WNT++S + K+ + F + M +
Sbjct: 149 MNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM 208
Query: 51 ----IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD--SEVYVGNALITMYSR 104
V F V + ++S + +GL L K G + +++V ++ I+MY+
Sbjct: 209 EVKPSPVSFVNVFPAVSISRSIKKANVFYGLML-----KLGDEYVKDLFVVSSAISMYAE 263
Query: 105 WGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFT 163
G + +RRVFD ++ WN ++ Y Q+ D VE+I +E + K + D V++
Sbjct: 264 LGDIESSRRVFDSCVERNIEVWNTMIGVYVQN-DCLVESIELFLEAIGSKEIVSDEVTYL 322
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
AASA + +ELG+Q HG K + + N LM YS+C + VF M +R
Sbjct: 323 LAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRER 382
Query: 224 NVISWTTMISMNREDAVS-----LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
+V+SW TMIS ++ + L EM+ G + +T L+ A S + G+ H
Sbjct: 383 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTH 442
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE--LSCREIISWNALISGYAQNGL 336
I+ E + + LI MY++ ++ S+K+F+ + R+ +WN++ISGY QNG
Sbjct: 443 AFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGH 501
Query: 337 SLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
+ F +++++ +PNA T S+L A + L G++ H I+ LD + V
Sbjct: 502 TEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDL--GKQLHGFSIRQYLDQNVFVA 559
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
SAL+DMY K G+I ++ +F++T+E++ +T +I +HG E ++ F M+ G++
Sbjct: 560 SALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIK 619
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
PD+ITF++VL+ C +G+I +G +F+ M + Y+I+PS +HY C+ DMLGRVGR+ EA E
Sbjct: 620 PDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYE 679
Query: 516 LV-GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG--SGSYVLMSNLYAE 572
V G G + SLLG+C++HG +E+ E +++ L K + SG VL+SN+YAE
Sbjct: 680 FVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAE 739
Query: 573 KGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLG 632
+ W+ V +R+GM+ KG++KEVG S ++ ++ F S D HP S EIY + + L
Sbjct: 740 EQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGY--VNCFVSRDQEHPHSSEIYDVIDGLA 797
Query: 633 SEMK 636
+M+
Sbjct: 798 KDMR 801
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 158/578 (27%), Positives = 280/578 (48%), Gaps = 33/578 (5%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVF--DAVT 59
C+ G A +F+ + P V WNT++ GF +AL F RM DA T
Sbjct: 50 CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYT 109
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE------ARR 113
YS+ L C + + G +H +++ +S V N+L+ MY + R+
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VFD M K+ V+WN ++S Y + G EA MMR ++ VSF + A +
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGR-NAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 174 NLELGKQIHGVSIKMG--YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+++ +G+ +K+G Y + V + +S Y++ + +VF +RN+ W TM
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 232 ISMNRE-----DAVSLFKE-MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
I + + +++ LF E + + ++VT++ A+S V+ GR HG + N
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGF-VSKN 347
Query: 286 FLSEPSV-CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
F P V N L+ MY+R S+ S VF + R+++SWN +IS + QNGL +
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKH-GQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + K+ Y +V + AA ++ K G++ H+ +I+ G+ + + S L+DMY
Sbjct: 408 YEMQKQGFKIDYI--TVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYS 464
Query: 404 KRGSIFESQRVFNET--QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
K G I SQ++F + E+ + W ++IS ++G E F++M + +RP+++T
Sbjct: 465 KSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTV 524
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
S+L C + G + G+ L ++ Y ++ + S +VDM + G ++ AE++ Q
Sbjct: 525 ASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
++ +LG +G MGER + M+ +G
Sbjct: 584 ERNSVTYTTMILG----YGQHGMGERAISLFLSMQESG 617
>gi|42563517|ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g05340
gi|332640702|gb|AEE74223.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 658
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 198/590 (33%), Positives = 324/590 (54%), Gaps = 25/590 (4%)
Query: 54 VFDAVTYSTALSFCLDHEGFL--FGLQLHSLIVKFG-----LDSEVY-----VGNALITM 101
+ + V S LS C EG+ G LH+ I+K +D++++ V N+L+++
Sbjct: 41 LLNHVDMSLLLSIC-GREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSL 99
Query: 102 YSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVS 161
Y++ G+LV+A ++FDEMP +D +S N + G+ ++ + E+ L++ M DH +
Sbjct: 100 YAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRE--TESGFVLLKRMLGSGGFDHAT 157
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
T S C + + K IH ++I GY +SVGN L+++Y KC + VF M
Sbjct: 158 LTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMS 217
Query: 222 DRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
RNVI+ T +IS ED + LF MR V PN VT++ + A S + EG+
Sbjct: 218 HRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQ 277
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
IH L K SE + + L+ MY++ S++D+ +F+ + + +S ++ G AQNG
Sbjct: 278 IHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGS 337
Query: 337 SLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A+Q F +++ + +A +VL + D SL G++ HS +IK + V
Sbjct: 338 EEEAIQFFIRMLQAGVEIDANVVSAVLGV--SFIDNSLGLGKQLHSLVIKRKFSGNTFVN 395
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+ L++MY K G + +SQ VF +++ +W ++I+A ARHG + + ++EM V+
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P +TFLS+L C G+I KGR L + M + + IEP +HY+C++DMLGR G L+EA+
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKS 515
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
+ +P P + Q+LLGAC HG+ E+GE A+ L + P S +++L++N+Y+ +G
Sbjct: 516 FIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGK 575
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
W+ A K MK+ GV KE G S ++ H F D HP++E IY
Sbjct: 576 WKERAKTIKRMKAMGVTKETGISSIEIE--HKTHSFVVEDKLHPQAEAIY 623
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 239/470 (50%), Gaps = 19/470 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS-FALRMNLIGVV-FDAV 58
+++Y K G+ A+ +F+ + D++S N V GF ++ + S F L ++G FD
Sbjct: 97 LSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHA 156
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T + LS C E L +H+L + G D E+ VGN LIT Y + G V R VFD M
Sbjct: 157 TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGM 216
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLEL 177
+++ ++ A++SG ++ + E L L +MR+GL + V++ SA +AC + +
Sbjct: 217 SHRNVITLTAVISGLIENELH--EDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVE 274
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+QIH + K G + + + + LM YSKC DA +F + + +S T ++
Sbjct: 275 GQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQ 334
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + E+A+ F M GV D + + +S I N + G+ +H L IK F
Sbjct: 335 NGSEEEAIQFFIRMLQAGV-EIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
V N LI MY++ + DS+ VF + R +SWN++I+ +A++G LAA++ + + E
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIF 409
KP TF S+L+A I G+ + + +V G++ + ++DM G+ G +
Sbjct: 454 VKPTDVTFLSLLHACSHVGLID--KGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLK 511
Query: 410 ESQRVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
E++ + K + W A++ A + HGD E + ++ + PDS
Sbjct: 512 EAKSFIDSLPLKPDCKIWQALLGACSFHGDTE--VGEYAAEQLFQTAPDS 559
>gi|297816220|ref|XP_002875993.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321831|gb|EFH52252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 731
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 203/612 (33%), Positives = 344/612 (56%), Gaps = 30/612 (4%)
Query: 6 KSGQFDKALCIFNNL-NNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYS 61
K G + A +F+ + D+ WN +++G ++S ++ M+ +GV D ++
Sbjct: 129 KLGDIEYAFEVFDKMPERDDVAVWNAMITGCKESGYHGTSIELFREMHKLGVRHDKFGFA 188
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE--MP 119
T LS C + FG Q+HSL++K G V NALITMY +V+AR VF+E +
Sbjct: 189 TVLSMCY-YGSLDFGKQVHSLVIKAGFFVASSVVNALITMYFNCQVVVDARLVFEEADVA 247
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D V++N ++ G G E++L +M+ GLR ++F S S+C E +G
Sbjct: 248 VRDQVTFNVVIDGLA--GFKREESLLVFRQMVEAGLRPTDLTFVSVMSSCSCET---MGH 302
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR-- 236
Q+HG+SIK GY + V N M+ YS E G A+KVF + ++++I+W TMIS N+
Sbjct: 303 QVHGLSIKTGYEEYTLVSNSTMTMYSSFEDFGAAHKVFESLEEKDLITWNTMISGYNQAN 362
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLI-HAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ A+ L+K M GV P++ TF L+ ++ + L M+ IK S+ +
Sbjct: 363 LGQSALLLYKRMHGIGVKPDEFTFGSLLASSLDLDAL----EMVQACVIKFGLSSKIEIS 418
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK- 352
N LI+ Y++ + ++ +F+ + +ISWNA+ISG+ NG S ++ F +++
Sbjct: 419 NALISAYSKHGKITKADLIFESSPKKNLISWNAIISGFYHNGFSFEGLERFSCLLEAEVL 478
Query: 353 --PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+AYT +L+ + SL G++ H++ ++ G + ++G+A ++MY + G++ +
Sbjct: 479 IIPDAYTLSILLSI--CVDISSLMLGEQTHAYALRHGQFKETLIGNAFINMYSQCGTLQK 536
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLSVLTVCG 469
S VF++ +K +W ++ISA ARHG ES + +K M+++G V PD+ T +VL+ CG
Sbjct: 537 SLAVFHQMSDKDTVSWNSLISAYARHGKGESAVLTYKTMQDEGKVDPDAATLSAVLSACG 596
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV--GQIPGGPGLS 527
G++ +G +F+SM++ + + P+ DH+SC+VD+LGR G L+EAE LV + G +
Sbjct: 597 HAGLVKEGLEIFNSMVEFHGLIPNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVD 656
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V +L AC HG++++G+ +A LM+ E YV +SN+YA G W+ RK +
Sbjct: 657 VWWALFSACAAHGDLKLGKMVARLLMEKEKNDPSVYVQLSNIYAGAGLWKEAEETRKAIN 716
Query: 588 SKGVRKEVGFSW 599
G K+ G SW
Sbjct: 717 MIGAMKQRGCSW 728
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 145/515 (28%), Positives = 249/515 (48%), Gaps = 61/515 (11%)
Query: 74 LFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR-------------------- 113
+FG Q+H ++ GL +V N L+++Y+R G L +R
Sbjct: 68 IFGGQVHCYAIRSGLLCHSHVSNTLLSLYARLGNLASLKRKFEEIIEPDVYSWTTLLSAS 127
Query: 114 -----------VFDEMPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVS 161
VFD+MP +D V+ WNA+++G + G +G +I EM + G+R D
Sbjct: 128 FKLGDIEYAFEVFDKMPERDDVAVWNAMITGCKESGYHGT-SIELFREMHKLGVRHDKFG 186
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR-- 219
F + S C + +L+ GKQ+H + IK G+ SV N L++ Y C+V DA VF
Sbjct: 187 FATVLSMC-YYGSLDFGKQVHSLVIKAGFFVASSVVNALITMYFNCQVVVDARLVFEEAD 245
Query: 220 MHDRNVISWTTMIS----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
+ R+ +++ +I RE+++ +F++M G+ P D+TF+ ++ + S + G
Sbjct: 246 VAVRDQVTFNVVIDGLAGFKREESLLVFRQMVEAGLRPTDLTFVSVMSSCSCETM---GH 302
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
+HGL IKT + V N +TMY+ FE + KVF+ L +++I+WN +ISGY Q
Sbjct: 303 QVHGLSIKTGYEEYTLVSNSTMTMYSSFEDFGAAHKVFESLEEKDLITWNTMISGYNQAN 362
Query: 336 LSLAAVQAF-----FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
L +A+ + GV KP+ +TFGS+L A + L + + +IK GL S
Sbjct: 363 LGQSALLLYKRMHGIGV----KPDEFTFGSLL-----ASSLDLDALEMVQACVIKFGLSS 413
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
+ +AL+ Y K G I ++ +F + +K+ +W AIIS +G + +F +
Sbjct: 414 KIEISNALISAYSKHGKITKADLIFESSPKKNLISWNAIISGFYHNGFSFEGLERFSCLL 473
Query: 451 NKGVR--PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG 508
V PD+ T +L++C + G L+ + + + ++M + G
Sbjct: 474 EAEVLIIPDAYTLSILLSICVDISSLMLGEQTHAYALRHGQFKETLIG-NAFINMYSQCG 532
Query: 509 RLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
L+++ + Q+ +S SL+ A HG E
Sbjct: 533 TLQKSLAVFHQMSDKDTVS-WNSLISAYARHGKGE 566
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 190/379 (50%), Gaps = 33/379 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
M MY F A +F +L D+++WNT++SG+ +++ AL RM+ IGV D
Sbjct: 324 MTMYSSFEDFGAAHKVFESLEEKDLITWNTMISGYNQANLGQSALLLYKRMHGIGVKPDE 383
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L+ LD + + + ++KFGL S++ + NALI+ YS+ G++ +A +F+
Sbjct: 384 FTFGSLLASSLDLDALEM---VQACVIKFGLSSKIEISNALISAYSKHGKITKADLIFES 440
Query: 118 MPNKDSVSWNAILSGYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
P K+ +SWNAI+SG+ +G G+E L+E + D + + S C +L
Sbjct: 441 SPKKNLISWNAIISGFYHNGFSFEGLERFSCLLE-AEVLIIPDAYTLSILLSICVDISSL 499
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
LG+Q H +++ G +GN ++ YS+C + VF +M D++ +SW ++IS
Sbjct: 500 MLGEQTHAYALRHGQFKETLIGNAFINMYSQCGTLQKSLAVFHQMSDKDTVSWNSLISAY 559
Query: 235 ----NREDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMI-------HGLCI 282
E AV +K M+ +G V P+ T ++ A LVKEG I HGL
Sbjct: 560 ARHGKGESAVLTYKTMQDEGKVDPDAATLSAVLSACGHAGLVKEGLEIFNSMVEFHGLIP 619
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSE---KVFDELSCREIISWNALISGYAQNG-LSL 338
+ S CL+ + R + ++E K+ ++ + W AL S A +G L L
Sbjct: 620 NVDHFS------CLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKL 673
Query: 339 AAVQAFFGVIKE-SKPNAY 356
+ A + KE + P+ Y
Sbjct: 674 GKMVARLLMEKEKNDPSVY 692
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 154/352 (43%), Gaps = 49/352 (13%)
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
LR D S + A +A GH ++ G Q+H +I+ G H V N L+S Y++
Sbjct: 47 LRPDQYSVSLAITAAGHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYARLGNLASLK 106
Query: 215 KVFRRMHDRNVISWTTMISMN------------------RED------------------ 238
+ F + + +V SWTT++S + R+D
Sbjct: 107 RKFEEIIEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAVWNAMITGCKESGYHG 166
Query: 239 -AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
++ LF+EM GV + F ++ G+L G+ +H L IK F SV N LI
Sbjct: 167 TSIELFREMHKLGVRHDKFGFATVLSMCYYGSL-DFGKQVHSLVIKAGFFVASSVVNALI 225
Query: 298 TMYARFESMQDSEKVFDE--LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KP 353
TMY + + D+ VF+E ++ R+ +++N +I G A G F + E+ +P
Sbjct: 226 TMYFNCQVVVDARLVFEEADVAVRDQVTFNVVIDGLA--GFKREESLLVFRQMVEAGLRP 283
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
TF SV+++ G + H IK G + +V ++ + MY + +
Sbjct: 284 TDLTFVSVMSSCSCE-----TMGHQVHGLSIKTGYEEYTLVSNSTMTMYSSFEDFGAAHK 338
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
VF +EK W +IS + +S + +K M GV+PD TF S+L
Sbjct: 339 VFESLEEKDLITWNTMISGYNQANLGQSALLLYKRMHGIGVKPDEFTFGSLL 390
>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 622
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 315/541 (58%), Gaps = 15/541 (2%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
FG QLH L G ++ V N++I+MY+++ + AR+VFD MP++D+++WN++++ Y
Sbjct: 84 FGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYL 143
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL--ELGKQIHGVSI---KMG 189
Q+G VEA+ L + G S S CG E +L +G+QIHG+ + ++
Sbjct: 144 QNG-LLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIR 202
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNRED---AVSLFK 244
V + + Y +C + A VF M +N +SWT +IS N +D A++ ++
Sbjct: 203 IQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYR 262
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF- 303
EM+++GV PN VT I L+ A + VK G+ IHG + F S S LI +Y
Sbjct: 263 EMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECG 322
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVL 362
+S+ +E++F+ S R+++ W+++I YA+ G S A++ F + +E++PN T +V+
Sbjct: 323 QSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVI 382
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
+A S KHG H +I+K G+ V +AL++MY K GS+ +S+++F E +
Sbjct: 383 SACTNLS--SFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRD 440
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
W ++ISA HG E + F EM+ +GV+ D++TFL+VL+ C G++ +G+ LF+
Sbjct: 441 SVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFE 500
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
+ D I + +HY+C++D+ GR G+LE+A E++ +P P + SL+ +C++HG +
Sbjct: 501 QVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRL 560
Query: 543 EMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADV 602
++ E ++ L++ EP + SY L+S ++AEKG W + +R+ MK + +RK GFS +
Sbjct: 561 DIAESLSSQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFSRIEA 620
Query: 603 G 603
G
Sbjct: 621 G 621
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 258/506 (50%), Gaps = 44/506 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K + A +F+ + + D ++WN++++ + ++ +AL +G +
Sbjct: 108 ISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKP 167
Query: 58 VTYSTALSFC---LDHEGFLFGLQLHSLIV---KFGLDSEVYVGNALITMYSRWGRLVEA 111
++ +S C +D G+ G Q+H L+V + + V++ A + Y R G + A
Sbjct: 168 ELLASMVSMCGREMD-LGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMA 226
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
R VFDEM K+ VSW A++SG + DY V A+ EM +G+ + V+ + +AC
Sbjct: 227 RSVFDEMEVKNEVSWTAVISGCANNQDYDV-ALACYREMQVEGVSPNRVTLIALLAACAR 285
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC-EVTGDANKVFRRMHDRNVISWTT 230
++ GK+IHG + + G+ + S L+ Y +C + A ++F R+V+ W++
Sbjct: 286 PGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSS 345
Query: 231 MI-SMNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I S R + A+ LF +MR + PN VT + +I A + + K G +IHG +K
Sbjct: 346 IIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFG 405
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
VCN LI MYA+ S+ DS K+F E+ R+ ++WN++IS Y +G A+Q F+
Sbjct: 406 IGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFY 465
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD-PIV---GSALLD 400
+ + K +A TF +VL+A A ++ GQ+ +V D + PI + L+D
Sbjct: 466 EMKERGVKLDAVTFLAVLSACNHAGLVT--EGQQLFE---QVNADCEIPITIEHYACLID 520
Query: 401 MYGKRGSIFESQRVFNETQEK-SEFAWTAIISALARHGDY---ESVMNQFKEMENKGVRP 456
++G+ G + ++ + K S W++++S+ HG ES+ +Q E P
Sbjct: 521 LHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIRSE-----P 575
Query: 457 DSITFLSVLTVCGRNGMIH--KGRHL 480
++ ++L+ MIH KGR L
Sbjct: 576 NNAASYTLLS------MIHAEKGRWL 595
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 138/262 (52%), Gaps = 15/262 (5%)
Query: 230 TMISMN-REDAVSLFKEMRLDGVCPNDVTFI--GLIHAISIGNLVKEGRMIHGLCIKTNF 286
T++SM + F ++ N + F+ +I A S + G +H L T
Sbjct: 38 TLVSMGLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFITGS 97
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA--- 343
++P V N +I+MYA+F ++ + +VFD + R+ I+WN++I+ Y QNGL + A+Q
Sbjct: 98 YTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKD 157
Query: 344 --FFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII---KVGLDSDPIVGSAL 398
F G + P S+++ G D+ + G++ H ++ ++ + + +A
Sbjct: 158 FYFLGFL----PKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAF 213
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+D Y + G ++ VF+E + K+E +WTA+IS A + DY+ + ++EM+ +GV P+
Sbjct: 214 VDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNR 273
Query: 459 ITFLSVLTVCGRNGMIHKGRHL 480
+T +++L C R G + G+ +
Sbjct: 274 VTLIALLAACARPGFVKYGKEI 295
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 184/410 (44%), Gaps = 23/410 (5%)
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
S AC G Q+H ++ G T V N ++S Y+K A +VF M R
Sbjct: 71 SVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHR 130
Query: 224 NVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLI----HAISIGNLVKEG 274
+ I+W +MI+ + +A+ + K+ G P ++ + +G + G
Sbjct: 131 DTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRI--G 188
Query: 275 RMIHGLCI---KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
R IHGL + + + + Y R + VFDE+ + +SW A+ISG
Sbjct: 189 RQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGC 248
Query: 332 AQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
A N A+ + + ++ PN T ++L A A +K+G+ H + + G DS
Sbjct: 249 ANNQDYDVALACYREMQVEGVSPNRVTLIALLAA--CARPGFVKYGKEIHGYAFRRGFDS 306
Query: 391 DPIVGSALLDMYGKRG-SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
AL+ +Y + G S+ ++R+F + + W++II + AR G+ + + F +M
Sbjct: 307 CHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKM 366
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
+ P+ +T L+V++ C G + +LK + I S + +++M + G
Sbjct: 367 RTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILK-FGIGFSIFVCNALINMYAKCGS 425
Query: 510 LEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
L+++ ++ ++P ++ S++ A +HG GE+ +M+ G
Sbjct: 426 LDDSRKIFLEMPSRDSVT-WNSMISAYGLHG---YGEQALQHFYEMKERG 471
>gi|449450916|ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 616
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 302/547 (55%), Gaps = 11/547 (2%)
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ +S C FG+Q+HS I+K G Y+ AL+ MY + + +A +VFDEM
Sbjct: 72 TKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSC 131
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
V+WN++++GY Q G Y + A+ +EM++KG+ S + C + +LG Q
Sbjct: 132 PSVVTWNSLVTGYLQAG-YPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQ 190
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MN 235
+H +S+K+ + ++V VG L+ YSKC D+ +VF M ++NV +WT+MIS
Sbjct: 191 LHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQL 250
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
+A+ L +EM + PN +T+ L+ + S + + IH I + S +
Sbjct: 251 PHEAMILMREMLHLNLKPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVT 310
Query: 296 LITMYARF-ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
L+T Y+ S++D KV + + ISWNA+I+G+ G+ A++ F + +E
Sbjct: 311 LVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDV 370
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ +TF S+ A+G +L+ G++ H + K G + V + L+ MY + G+I +S+
Sbjct: 371 DFFTFTSIFKAIGMTS--ALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKM 428
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF+ E +W +++S A HG E ++ F++M ++PD+ +FL+VLT C G+
Sbjct: 429 VFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGL 488
Query: 474 IHKGRHLFDSMLKDYHIEPSP-DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+ KG F M +EP +HY+ +VD+ GR G+L EAE + IP PG+S+ ++L
Sbjct: 489 LDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKAL 548
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L AC IHGN ++ R A L+++ P +Y+++SN G W+ A +R+ M ++GV+
Sbjct: 549 LSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDGYWDDAASIRRLMSNRGVK 608
Query: 593 KEVGFSW 599
KE GFSW
Sbjct: 609 KEPGFSW 615
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 248/486 (51%), Gaps = 19/486 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K A +F+ ++ P +V+WN++++G+ ++ A+S L M G+
Sbjct: 110 VDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTP 169
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S L C + G QLH++ +K S V VG LI MYS+ L ++RRVFD
Sbjct: 170 FSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDI 229
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M NK+ +W +++SGY ++ EA++ + EM+ L+ + +++ S S+ ++ +
Sbjct: 230 MLNKNVFTWTSMISGYARN-QLPHEAMILMREMLHLNLKPNGMTYNSLLSSFSCPRHFDK 288
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSK-CEVTGDANKVFRRMHDRNVISWTTMISMNR 236
KQIH I GY ++ + L++ YS+ C D KV + + ISW +I+
Sbjct: 289 CKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFT 348
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E+A+ F +MR + + TF + AI + + ++EG+ IHGL KT + S
Sbjct: 349 NLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLS 408
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L++MYAR +++DS+ VF ++ ++ISWN+L+SG A +G A+ F + +
Sbjct: 409 VQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTC 468
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSI 408
KP+ +F +VL A L G + L P + + L+D++G+ G +
Sbjct: 469 IKPDNTSFLAVLTACSHVG--LLDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKL 526
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP-DSITFLSVLT 466
+E++ E + A++SA HG+ + + K++ + P D T++ +
Sbjct: 527 YEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLE--LYPYDPATYIMLSN 584
Query: 467 VCGRNG 472
GR+G
Sbjct: 585 ALGRDG 590
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 200/444 (45%), Gaps = 31/444 (6%)
Query: 133 YTQDGDYGVEAILA---------LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
YT D ++ +L L++++R G T S C L+ G Q+H
Sbjct: 33 YTHSEDVSIKPLLQTHNVVDIQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHS 92
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED----- 238
IK+G+ + + L+ Y KC DA+KVF M +V++W ++++ +
Sbjct: 93 TIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLM 152
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
AVSLF EM G+ P + G + S G +H + +K F S V LI
Sbjct: 153 AVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLID 212
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYT 357
MY++ ++QDS +VFD + + + +W ++ISGYA+N L A+ ++ + KPN T
Sbjct: 213 MYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMILMREMLHLNLKPNGMT 272
Query: 358 FGSVLNAVGAAEDISLKHGQRC---HSHIIKVGLDSDPIVGSALLDMYGK-RGSIFESQR 413
+ S+L++ +H +C H II G +S+ + L+ Y + GS+ + ++
Sbjct: 273 YNSLLSSFSCP-----RHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRK 327
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
V + + + +W A+I+ G E + F +M + D TF S+ G
Sbjct: 328 VCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSA 387
Query: 474 IHKGRHLFDSMLKD-YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+ +G+ + + K Y + S + +V M R G + ++ ++V + L SL
Sbjct: 388 LEEGKQIHGLVYKTGYTLNLSVQ--NGLVSMYARSGAIRDS-KMVFSMMNEHDLISWNSL 444
Query: 533 LGACRIHGNVEMGERIADALMKME 556
L C HG GE D KM
Sbjct: 445 LSGCAYHG---CGEEAIDLFEKMR 465
>gi|326487167|dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 217/655 (33%), Positives = 340/655 (51%), Gaps = 45/655 (6%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVF-DAVTYSTAL 64
K+G+ AL +F+ + ++V+W + +SG ++ R G +F D V AL
Sbjct: 41 KAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNG-------RPEAAGEMFADMVESGVAL 93
Query: 65 S-----------FCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
+ G Q+HSL V+ G + +VG+ L+ +Y+R G A
Sbjct: 94 NDFACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEA 153
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
V M + D V++ +++S + G++G+ A AL +MM G+ + + TS +AC
Sbjct: 154 VLARMESPDVVAYTSLVSALCRSGEFGMAA-EALGQMMGHGVMPNEHTVTSILAACC--- 209
Query: 174 NLELGKQIHGVSIK-MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
L LG QIHG IK MG+ V + L+ YS+ A VF + +NV++W TM+
Sbjct: 210 PLVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMM 269
Query: 233 SMN-----REDAVSLFKEMRLDGVC-PNDVTF---IGLIHAISIGNLVKEGRMIHGLCIK 283
++ EDA+ LF EM +GV PN+ F +G +I++G+ +H L IK
Sbjct: 270 QLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIALGS------QLHSLAIK 323
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
S V N L++MY R +Q E +F + +I+SW A IS Y QNG A+
Sbjct: 324 HGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIAL 383
Query: 344 FFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
+ + PN Y F SVL++ A+ L G++ H +K+G D G+AL++MY
Sbjct: 384 LSRMHSQGLTPNDYAFSSVLSSC--ADLALLDQGRQFHCLALKLGCDVKTCTGNALINMY 441
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K G I ++ F+ + +W ++I A+HG+ + V+ F EM + G P+ T L
Sbjct: 442 SKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLL 501
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKD-YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
VL C G++ +G F S + Y +P HY+CMVDMLGR GR ++A L+ ++P
Sbjct: 502 GVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMP 561
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAI 581
PG+ V ++LL +CR+HGN+E G A+ L+++ S SYVLMS ++A G+W +
Sbjct: 562 FEPGVLVWKTLLASCRLHGNLETGRLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADM 621
Query: 582 LRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+R+ M GVRKE G SW +V + +H F + D +HP S IYRM L M+
Sbjct: 622 VRRRMDEAGVRKEAGRSWVEVR--NEVHTFVAQDVSHPDSPSIYRMLWELSDAMR 674
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 176/350 (50%), Gaps = 22/350 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVF-D 56
++ Y ++G+FD A +F+NL ++V+W T++ + +DAL M GVV +
Sbjct: 238 VDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPN 297
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+S AL C E G QLHSL +K GL S + V NAL++MY R G + + +F
Sbjct: 298 EFAFSIALGAC---ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFR 354
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ + D VSW A +S Y Q+G +G +AI L M +GL + +F+S S+C L+
Sbjct: 355 GIEDPDIVSWTAAISAYFQNG-HGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLD 413
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+Q H +++K+G GN L++ YSKC A F M R+V SW ++I +
Sbjct: 414 QGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHA 473
Query: 237 EDA-----VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-----RMIHGLCIKTNF 286
+ + F EM +G PN+ T +G++ A + LV EG + GL F
Sbjct: 474 QHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGL--YGTF 531
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISGYAQNG 335
L+ P C++ M R D+ + +E+ ++ W L++ +G
Sbjct: 532 LTPPHYA-CMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHG 580
>gi|326522859|dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 217/655 (33%), Positives = 340/655 (51%), Gaps = 45/655 (6%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVF-DAVTYSTAL 64
K+G+ AL +F+ + ++V+W + +SG ++ R G +F D V AL
Sbjct: 41 KAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNG-------RPEAAGEMFADMVESGVAL 93
Query: 65 S-----------FCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
+ G Q+HSL V+ G + +VG+ L+ +Y+R G A
Sbjct: 94 NDFACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEA 153
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
V M + D V++ +++S + G++G+ A AL +MM G+ + + TS +AC
Sbjct: 154 VLARMESPDVVAYTSLVSALCRSGEFGMAA-EALGQMMGHGVMPNEHTVTSILAACC--- 209
Query: 174 NLELGKQIHGVSIK-MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
L LG QIHG IK MG+ V + L+ YS+ A VF + +NV++W TM+
Sbjct: 210 PLVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMM 269
Query: 233 SMN-----REDAVSLFKEMRLDGVC-PNDVTF---IGLIHAISIGNLVKEGRMIHGLCIK 283
++ EDA+ LF EM +GV PN+ F +G +I++G+ +H L IK
Sbjct: 270 QLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIALGS------QLHSLAIK 323
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
S V N L++MY R +Q E +F + +I+SW A IS Y QNG A+
Sbjct: 324 HGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIAL 383
Query: 344 FFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
+ + PN Y F SVL++ A+ L G++ H +K+G D G+AL++MY
Sbjct: 384 LSRMHSQGLTPNDYAFSSVLSSC--ADLALLDQGRQFHCLALKLGCDVKTCTGNALINMY 441
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K G I ++ F+ + +W ++I A+HG+ + V+ F EM + G P+ T L
Sbjct: 442 SKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLL 501
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKD-YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
VL C G++ +G F S + Y +P HY+CMVDMLGR GR ++A L+ ++P
Sbjct: 502 GVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMP 561
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAI 581
PG+ V ++LL +CR+HGN+E G A+ L+++ S SYVLMS ++A G+W +
Sbjct: 562 FEPGVLVWKTLLASCRLHGNLETGRLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADM 621
Query: 582 LRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+R+ M GVRKE G SW +V + +H F + D +HP S IYRM L M+
Sbjct: 622 VRRRMDEAGVRKEAGRSWVEVR--NEVHTFVAQDVSHPDSPSIYRMLWELSDAMR 674
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 176/350 (50%), Gaps = 22/350 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVF-D 56
++ Y ++G+FD A +F+NL ++V+W T++ + +DAL M GVV +
Sbjct: 238 VDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPN 297
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+S AL C E G QLHSL +K GL S + V NAL++MY R G + + +F
Sbjct: 298 EFAFSIALGAC---ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFR 354
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ + D VSW A +S Y Q+G +G +AI L M +GL + +F+S S+C L+
Sbjct: 355 GIEDPDIVSWTAAISAYFQNG-HGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLD 413
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+Q H +++K+G GN L++ YSKC A F M R+V SW ++I +
Sbjct: 414 QGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHA 473
Query: 237 EDA-----VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-----RMIHGLCIKTNF 286
+ + F EM +G PN+ T +G++ A + LV EG + GL F
Sbjct: 474 QHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGL--YGTF 531
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISGYAQNG 335
L+ P C++ M R D+ + +E+ ++ W L++ +G
Sbjct: 532 LTPPHYA-CMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHG 580
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 197/643 (30%), Positives = 326/643 (50%), Gaps = 85/643 (13%)
Query: 86 FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN--KDSVSWNAILSGYTQDGDYGVEA 143
F D +L+ Y+ GRL A FD +P +D+V NA++S Y + + A
Sbjct: 82 FRADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYAR-ASHAAPA 140
Query: 144 ILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELG--KQIHGVSIKMGYGTHVSVGNVL 200
+ ++ G LR D SFT+ SA GH N+ + Q+ +K G G +SV N L
Sbjct: 141 VAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNAL 200
Query: 201 MSTYSKCEV---TGDANKVFRRMHDRNVISWTTMIS--MNRED----------------- 238
++ Y KCE T DA KV M D++ ++WTTM+ + R D
Sbjct: 201 VALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDV 260
Query: 239 -----------------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
A LF+ M L+ V ++ TF ++ A + G+ +HG
Sbjct: 261 VWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQI 320
Query: 282 --IKTNFLSEPS--VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS 337
++ NF+ E + V N L+T+Y++ ++ + ++FD + ++++SWN ++SGY ++
Sbjct: 321 TRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCL 380
Query: 338 LAAVQAF------------------------------FGVIK--ESKPNAYTFGSVLNAV 365
AV+ F F ++ + KP YT+ ++A
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISAC 440
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
G E SLKHG++ H H++++G + G+AL+ MY + G++ E+ +F +
Sbjct: 441 G--ELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVS 498
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W A+ISAL +HG + F M +G+ PD I+FL+VLT C +G++ +G F+SM
Sbjct: 499 WNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMK 558
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+D+ I P DHY+ ++D+LGR GR+ EA +L+ +P P S+ +++L CR G++E+G
Sbjct: 559 RDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELG 618
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
AD L KM P G+Y+L+SN Y+ G W A +RK M+ +GV+KE G SW + G
Sbjct: 619 AHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAG-- 676
Query: 606 DGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+ +H F GD HP + ++Y+ E +G+ M+ L + + L
Sbjct: 677 NKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVL 719
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 228/532 (42%), Gaps = 108/532 (20%)
Query: 4 YCKSGQFDKALCIFNNLNNP--DIVSWNTVLSGFEK-SDDALSFALRMNLIG---VVFDA 57
Y +G+ A+ F+ + D V N V+S + + S A + A+ +L+ + D
Sbjct: 98 YAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDD 157
Query: 58 VTYSTALSFC--LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRL---VEAR 112
+++ LS L + QL ++K G + V NAL+ +Y + L +AR
Sbjct: 158 YSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDAR 217
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYG------------------------------VE 142
+V DEMP+KD+++W ++ GY + GD G VE
Sbjct: 218 KVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVE 277
Query: 143 AILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG----THVSVGN 198
A M+ + + LD +FTS SAC + GK +HG ++ + V N
Sbjct: 278 AFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNN 337
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-------MNR--------------- 236
L++ YSKC A ++F M ++V+SW T++S +++
Sbjct: 338 ALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELS 397
Query: 237 --------------EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
EDA+ LF MR + V P D T+ G I A +K G+ +HG +
Sbjct: 398 WMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLV 457
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
+ F S N LITMYAR +++++ +F + + +SWNA+IS Q+G A++
Sbjct: 458 QLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALE 517
Query: 343 AFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL--------DSDPI 393
F ++ E P+ +F +VL A HS ++ G D I
Sbjct: 518 LFDRMVAEGIYPDRISFLTVLTACN-------------HSGLVDEGFQYFESMKRDFGII 564
Query: 394 VG----SALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G + L+D+ G+ G I E++ + E + W AI+S GD E
Sbjct: 565 PGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDME 616
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 104/214 (48%), Gaps = 35/214 (16%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---------------------- 38
+ +Y K G A IF+N+ + D+VSWNT+LSG+ +S
Sbjct: 340 VTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWM 399
Query: 39 ------------DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKF 86
+DAL RM V TY+ A+S C + G QLH +V+
Sbjct: 400 VMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQL 459
Query: 87 GLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILA 146
G + GNALITMY+R G + EA +F MPN DSVSWNA++S Q G +G EA+
Sbjct: 460 GFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHG-HGREALEL 518
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
M+ +G+ D +SF + +AC H ++ G Q
Sbjct: 519 FDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQ 552
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY + G +A +F + N D VSWN ++S + +AL RM G+ D
Sbjct: 472 ITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDR 531
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
+++ T L+ C L EGF + S+ FG+ LI + R GR+ EAR
Sbjct: 532 ISFLTVLTACNHSGLVDEGFQY---FESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARD 588
Query: 114 VFDEMPNKDSVS-WNAILSGYTQDGD 138
+ MP + + S W AILSG GD
Sbjct: 589 LIKTMPFEPTPSIWEAILSGCRTSGD 614
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 204/646 (31%), Positives = 343/646 (53%), Gaps = 28/646 (4%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DAL-SFALRMNLIGVVFDAVTYSTALSFCLDHE 71
+ + + + VS+N ++S + ++ AL +FA G+ D TY+ AL+ C
Sbjct: 58 LIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRAL 117
Query: 72 GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
G +H++ V GL + V++ N+L +MY+ G + EARRVFD D VSWN++LS
Sbjct: 118 DLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLS 177
Query: 132 GYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASAC--GHEKNLELGKQIHGVSIKM 188
GY + G E L + +M GL + + S C G + + + +HG +K
Sbjct: 178 GYVRAG--AREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKA 235
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS------------MNR 236
G + + + ++ Y+K +A +F+ + D NVI + MI+ ++R
Sbjct: 236 GLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSR 295
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
E A+SL+ EM+ G+ P++ TF ++ A ++ G+ IHG +K +F + + + L
Sbjct: 296 E-ALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSAL 354
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
I +Y+ M+D + F L ++I++W ++ISG QN L A++ F I KP+
Sbjct: 355 IDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDL 414
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+T SV+NA A + G++ IK G + +G++ + M + G + R F
Sbjct: 415 FTMSSVMNAC--ASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRF 472
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
E + + +W+A+IS+ A+HG + F EM N V P+ +TFL+VLT C G++
Sbjct: 473 QEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVD 532
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
G ++ M +Y + P+ H +C+VD+LGR GRL +AE + V +SLL +
Sbjct: 533 DGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLAS 592
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
CRIHG++E G+ +AD +M +EP S SYV++ N+Y + G+ + + R MK +GV+KE
Sbjct: 593 CRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEP 652
Query: 596 GFSWADVGDIDGLHGFSSGDNTHPRSEEIY-RMAECLGSEMKYLNS 640
G SW ++ G+H F +GD +HP S IY ++AE L K N+
Sbjct: 653 GLSWIELR--SGVHSFVAGDKSHPESNAIYKKLAEMLSKIEKLANT 696
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 236/473 (49%), Gaps = 29/473 (6%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
+MY G+ +A +F+ D VSWN++LSG+ ++ ++ L M G+ +++
Sbjct: 146 SMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSF 205
Query: 59 TYSTALSFCLDHE--GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ + C G +H +VK GLD+++++ +A+I MY++ G L A +F
Sbjct: 206 ALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFK 265
Query: 117 EMPNKDSVSWNAILSGYTQD-----GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+P+ + + +NA+++G+ +D + EA+ EM +G++ +F+S AC
Sbjct: 266 SVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNL 325
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
GKQIHG +K + +G+ L+ YS D + FR + +++++WT+M
Sbjct: 326 AGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSM 385
Query: 232 IS---MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS N E A+ LF+E G+ P+ T +++A + + + G I L IK F
Sbjct: 386 ISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGF 445
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
++ N I M AR + + F E+ R+++SW+A+IS +AQ+G + A++ F
Sbjct: 446 NRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNE 505
Query: 347 VIK-ESKPNAYTFGSVLNAV--GAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDM 401
++ + PN TF +VL A G D L++ + I+K P + + ++D+
Sbjct: 506 MMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYE-----IMKNEYGLSPTIKHVTCVVDL 560
Query: 402 YGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYES---VMNQFKEME 450
G+ G + +++ ++ W +++++ HGD E V +Q ++E
Sbjct: 561 LGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLE 613
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 180/349 (51%), Gaps = 25/349 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---------EKSDDALSFALRMNLI 51
++MY K G A+ +F ++ +P+++ +N +++GF E S +ALS M
Sbjct: 248 IDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSR 307
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
G+ T+S+ L C F FG Q+H ++K + Y+G+ALI +YS G + +
Sbjct: 308 GMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDG 367
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
R F +P +D V+W +++SG Q+ + +A+ E + GL+ D + +S +AC
Sbjct: 368 YRCFRSLPKQDIVTWTSMISGCVQNELFE-KALRLFQESICYGLKPDLFTMSSVMNACAS 426
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR---MHDRNVISW 228
G+QI ++IK G+ ++GN + C +GD + V RR M R+V+SW
Sbjct: 427 LAVARTGEQIQCLAIKYGFNRFTAMGNSFIHM---CARSGDVDAVTRRFQEMESRDVVSW 483
Query: 229 TTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
+ +IS + + DA+ +F EM V PN+VTF+ ++ A S G LV +G + + +K
Sbjct: 484 SAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEI-MK 542
Query: 284 TNFLSEPSV--CNCLITMYARFESMQDSEK-VFDELSCREIISWNALIS 329
+ P++ C++ + R + D+E + D + + W +L++
Sbjct: 543 NEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLA 591
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 202/626 (32%), Positives = 338/626 (53%), Gaps = 31/626 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD-----------ALSFALRMNLI 51
+Y G + A +F+ + D+VSWNT++ + D L ++ NL+
Sbjct: 203 LYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLV 262
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
V+ + S AL D E ++H VK GLDS+V NAL+ Y + G +
Sbjct: 263 SVI-SLLPISAALE---DEE---MTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKAL 315
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+VF+E K+ VSWN+I++G G +A+ A M+ G + + V+ +S
Sbjct: 316 WQVFNETVEKNEVSWNSIINGLACKGRCW-DALNAFRMMIDAGAQPNSVTISSILPVLVE 374
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+ + GK+IHG S++MG T + + N L+ Y+K + +A+ +F + RN++SW M
Sbjct: 375 LECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAM 434
Query: 232 IS---MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I+ +NR +A+ +M+ G CPN VTF ++ A + + G+ IH + ++
Sbjct: 435 IANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGL 494
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S+ V N LI MYA+ + + VF+ S ++ +S+N LI GY++ L ++ F
Sbjct: 495 TSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSE 553
Query: 347 V-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ + KP+ +F V++A A +LK G+ H ++ L S V ++LLD Y K
Sbjct: 554 MRLLGKKPDVVSFVGVISA--CANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKC 611
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G I + R+FN+ K +W +I G+ E+ ++ F+ M + V+ D +++++VL
Sbjct: 612 GRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVL 671
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ +G F ML +EP+ HY+CMVD+LGR G +EEA +L+ Q+P P
Sbjct: 672 SACSHGGLVERGWQYFSEMLAQ-RLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPD 730
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
++ +LLGACRI+GNVE+G R A+ L +++P G Y+L+SN+YAE G W+ +R+
Sbjct: 731 ANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIREL 790
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGF 611
MKS+G +K G SW + D +H F
Sbjct: 791 MKSRGAKKNPGCSWVQI--YDQVHAF 814
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/526 (30%), Positives = 267/526 (50%), Gaps = 19/526 (3%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYS 61
+++ ++ Q + ++N L ++WN GFE + RM GV D T+
Sbjct: 111 SLFNQTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYN-------RMVRRGVQLDDHTFP 163
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
L C D G+++H ++ K G D++VYVGN L+ +Y G L +ARR+FDEMP +
Sbjct: 164 FVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPER 223
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
D VSWN I+ + +GDY ++R ++ + VS S ++ E+ ++I
Sbjct: 224 DVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRI 283
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNR 236
H S+K+G + V+ N L+ Y KC +VF ++N +SW ++I+
Sbjct: 284 HCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRC 343
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
DA++ F+ M G PN VT ++ + K G+ IHG ++ ++ + N L
Sbjct: 344 WDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSL 403
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PN 354
I MYA+ ++ +F L R I+SWNA+I+ YA N L L A++ F ++E+ PN
Sbjct: 404 IDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIR-FVIQMQETGECPN 462
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
A TF +VL A A L G+ H+ +++GL SD V ++L+DMY K G + ++ V
Sbjct: 463 AVTFTNVLPA--CARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNV 520
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
FN T K E ++ +I + D +N F EM G +PD ++F+ V++ C +
Sbjct: 521 FN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAAL 579
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+G+ + L++ H+ + ++D + GR++ A L QI
Sbjct: 580 KQGKEVHGVALRN-HLYSHLFVSNSLLDFYTKCGRIDIACRLFNQI 624
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 145/576 (25%), Positives = 275/576 (47%), Gaps = 69/576 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNL-IGVVFD 56
++ Y K G +FN + VSWN++++G + DAL+ A RM + G +
Sbjct: 303 VDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALN-AFRMMIDAGAQPN 361
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+VT S+ L ++ E F G ++H ++ G ++++++ N+LI MY++ G EA +F
Sbjct: 362 SVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFH 421
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ ++ VSWNA+++ Y + +EAI +I+M G + V+FT+ AC L
Sbjct: 422 NLDRRNIVSWNAMIANYALN-RLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLG 480
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
GK+IH + +++G + + V N L+ Y+KC A VF V +I +
Sbjct: 481 PGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEVSYNILIIGYSE 540
Query: 237 ED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
D +++LF EMRL G P+ V+F+G+I A + +K+G+ +HG+ ++ + S V
Sbjct: 541 TDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFV 600
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ Y + + + ++F+++ +++ SWN +I GY G A+ F + ++
Sbjct: 601 SNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTV 660
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ + ++ +VL+A HG L++ + S +
Sbjct: 661 QYDLVSYIAVLSAC--------SHG--------------------GLVERGWQYFSEMLA 692
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
QR+ E +E +T ++ L R G E +++ + PD+ + ++L C
Sbjct: 693 QRL-----EPTEMHYTCMVDLLGRAGFVEEAAKLIQQLP---IAPDANIWGALLGACRIY 744
Query: 472 GMIHKGR----HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG----- 522
G + GR HLF+ LK H +Y + ++ GR +EA ++ +
Sbjct: 745 GNVELGRRAAEHLFE--LKPQHC----GYYILLSNIYAETGRWDEANKIRELMKSRGAKK 798
Query: 523 GPGLSVLQ------SLLGACRIHGNVEMGERIADAL 552
PG S +Q + + R+ G E+G+ +A+++
Sbjct: 799 NPGCSWVQIYDQVHAFVAEERVEG-FELGDWLAESV 833
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 189/587 (32%), Positives = 334/587 (56%), Gaps = 15/587 (2%)
Query: 71 EGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAI 129
+ F G QLH+ ++ F L++ Y+ L Y+ G + +A +FD + K+S WN +
Sbjct: 73 KSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFM 132
Query: 130 LSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
+ GY +G +++++ EM+ G R D+ ++ ACG +E+G+++H + G
Sbjct: 133 IRGYASNG-LPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCG 191
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFK 244
+ + VGN L++ Y+K G A VF RM +R++ SW TMIS ++A S +F
Sbjct: 192 LESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFD 251
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS-EPSVCNCLITMYARF 303
M G+ + T +GL+ A + VKEG++IHG ++ + + N LI MY
Sbjct: 252 LMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNC 311
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVL 362
M D+ ++F+ + ++ +SWN++I GYA+NG + +++ F + + S P+ TF +VL
Sbjct: 312 NCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVL 371
Query: 363 NAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
GA + I+ L++G HS+++K G D++ IVG+AL+DMY K GS+ S+RVF+E +K
Sbjct: 372 ---GACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDK 428
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
S +W+A+++ HG ++ M+ V PD+ F S+L+ C G++ +G+ +F
Sbjct: 429 SLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIF 488
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
M K+Y+++P+ HYSCMVD+LGR G L+EA ++ + P + +LL A R+H N
Sbjct: 489 YKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKN 548
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
+++ E A + M P SY+ +SN+YA + W+ V +R ++ KG++K G S+ +
Sbjct: 549 IKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIE 608
Query: 602 VGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+ ++ +H F GD +H ++E+IY L ++K K + ++
Sbjct: 609 LDNM--VHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVF 653
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 221/446 (49%), Gaps = 17/446 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y G +A IF+ + + WN ++ G+ + +L M G D TY
Sbjct: 105 YAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTY 164
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
L C D G ++HS +V GL+S++YVGN+L+ MY+++G + AR VFD M
Sbjct: 165 PFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAE 224
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D SWN ++SGY ++ D G A L M + GL D + SAC K ++ GK
Sbjct: 225 RDLTSWNTMISGYAKNADSGT-AFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKV 283
Query: 181 IHGVSIKMGYGTHVS-VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SM 234
IHG +++ G + N L+ Y C DA ++F R+ ++ +SW +MI +
Sbjct: 284 IHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNG 343
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+ +++ LF+ M LDG P+ VTFI ++ A ++ G IH +K F + V
Sbjct: 344 DAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGT 403
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-P 353
L+ MY++ S+ S +VFDE+ + ++SW+A+++GY +G A+ G+ S P
Sbjct: 404 ALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIP 463
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIFES 411
+ F S+L+A A + G+ + K + P + S ++D+ G+ G + E+
Sbjct: 464 DNGVFTSILSACSHAGLVV--EGKEIFYKMEK-EYNVKPALSHYSCMVDLLGRAGHLDEA 520
Query: 412 QRVFNETQEK-SEFAWTAIISALARH 436
+ + K + W A+++A H
Sbjct: 521 YVIIRTMEIKPTSDIWAALLTASRLH 546
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 225/479 (46%), Gaps = 40/479 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+ MY K G A +F+ + D+ SWNT++SG+ K+ D+ + L +L+ G+ D
Sbjct: 203 LAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADC 262
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFD 116
T LS C D + G +H V+ + + + N+LI MY +V+ARR+F+
Sbjct: 263 TTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFE 322
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ KD+VSWN+++ GY ++GD E++ M G D V+F + AC L
Sbjct: 323 RVRWKDTVSWNSMILGYARNGD-AFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALR 381
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G IH +K G+ + VG L+ YSKC + +VF M D++++SW+ M++
Sbjct: 382 YGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYG 441
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI-HGLCIKTNFLSE 289
RE A+S+ M+ + V P++ F ++ A S LV EG+ I + + + N
Sbjct: 442 LHGRGRE-AISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPA 500
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG-YAQNGLSLAAVQAFFGV 347
S +C++ + R + ++ + + + W AL++ + LA + A
Sbjct: 501 LSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISA--QK 558
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ + P + L+ + AAE +R + + + GL P G + +++ +
Sbjct: 559 VFDMNPKVVSSYICLSNIYAAEK-RWDDVERVRAMVRRKGLKKSP--GCSFIEL----DN 611
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK-EMENKGVRPD-SITFLSV 464
+ V +++ +++E D + +N+ K +++ G +PD S+ F V
Sbjct: 612 MVHRFLVGDKSHQQTE--------------DIYAKLNELKQQLKEAGYKPDTSLVFYDV 656
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 224/674 (33%), Positives = 348/674 (51%), Gaps = 59/674 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRM---NLIGVV 54
+NMY K G D A +F+ + N D VSWN++++ FE+ + A+ M N+
Sbjct: 127 VNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTS 186
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
F V+ + A S ++ G L G Q+H+ +++ G D + NAL+TMY++ GR+ EA+ +
Sbjct: 187 FTLVSVAHACSNLIN--GLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTL 243
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD +KD VSWN I+S +Q+ D EA+L L M++ G+R + V+ S AC H +
Sbjct: 244 FDVFDDKDLVSWNTIISSLSQN-DRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEM 302
Query: 175 LELGKQIHG-VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L GK+IH V + + VG L+ Y C+ VF M R + W MI+
Sbjct: 303 LGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIA 362
Query: 234 ---MNRED--AVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
N D A+ LF EM + G+ PN VT ++ A + IH +K F
Sbjct: 363 GYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFE 422
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA--------------- 332
+ V N L+ MY+R ++ + +F ++ ++I+SWN +I+GY
Sbjct: 423 KDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDM 482
Query: 333 QNGLSLAAVQAFFGVIKES----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
Q G + + F KPN+ T +VL G A +L G+ H++ +K L
Sbjct: 483 QRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLP--GCAALAALGKGKEIHAYAVKQML 540
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
D VGSAL+DMY K G + S+ VF + ++ W +I A HG E + F+
Sbjct: 541 SKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRR 600
Query: 449 M-----ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
M N+ +RP+ +T++++ +GM+ +G +LF +M + IEP+ DHY+C+VD+
Sbjct: 601 MVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDL 660
Query: 504 LGRVGRLEEAEELVGQIPGG-PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGS 562
LGR G++EEA L+ +P + SLLGAC+IH N+E+GE A L ++P
Sbjct: 661 LGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPN---- 716
Query: 563 YVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSE 622
VL Y K ++L + MK KGVRKE G SW + G D +H F +GD +HP+S+
Sbjct: 717 -VLD---YGTKQ-----SMLGRKMKEKGVRKEPGCSWIEHG--DEVHKFLAGDVSHPQSK 765
Query: 623 EIYRMAECLGSEMK 636
E++ E L MK
Sbjct: 766 EVHEYLETLSLRMK 779
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 234/507 (46%), Gaps = 32/507 (6%)
Query: 41 ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALIT 100
A+S M GV D + L + G QLH+ + KFG V N+L+
Sbjct: 69 AISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVN 128
Query: 101 MYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
MY + G + ARRVFDE+ N+D VSWN++++ + ++ + A+ M+ + +
Sbjct: 129 MYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWEL-AVHLFRLMLLENVGPTSF 187
Query: 161 SFTSAASACGHEKN-LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR 219
+ S A AC + N L LGKQ+H ++ G N L++ Y+K +A +F
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDV 246
Query: 220 MHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
D++++SW T+IS E+A+ M GV PN VT ++ A S ++ G
Sbjct: 247 FDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCG 306
Query: 275 RMIHGLCIKTNFLSEPSVCNC-LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
+ IH + N L E S C L+ MY + + VFD + R I WNA+I+GY +
Sbjct: 307 KEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVR 366
Query: 334 NGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
N A++ F ++ E PN+ T SVL A E K G HS ++K G + D
Sbjct: 367 NEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEG--IHSCVVKWGFEKD 424
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME- 450
V +AL+DMY + G I ++ +F K +W +I+ G ++ +N +M+
Sbjct: 425 KYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQR 484
Query: 451 -----------------NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
N ++P+S+T ++VL C + KG+ + +K +
Sbjct: 485 GQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQM-LSKD 543
Query: 494 PDHYSCMVDMLGRVGRLEEAEELVGQI 520
S +VDM + G L + + Q+
Sbjct: 544 VAVGSALVDMYAKCGCLNLSRTVFEQM 570
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 200/408 (49%), Gaps = 21/408 (5%)
Query: 126 WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVS 185
W + L TQ +AI M+ G+ D+ +F + A ++L LGKQ+H
Sbjct: 52 WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHV 111
Query: 186 IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAV 240
K G +V N L++ Y KC A +VF + +R+ +SW +MI+ E AV
Sbjct: 112 FKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAV 171
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
LF+ M L+ V P T + + HA S + N + G+ +H ++ N N L+TM
Sbjct: 172 HLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLR-NGDWRTFTNNALVTM 230
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYT 357
YA+ + +++ +FD ++++SWN +IS +QN A+ + V+ +S +PN T
Sbjct: 231 YAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEAL-LYLHVMLQSGVRPNGVT 289
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
SVL A E L G+ H+ ++ L + VG AL+DMY + + VF+
Sbjct: 290 LASVLPACSHLE--MLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFD 347
Query: 417 ETQEKSEFAWTAIISALARHG-DYESVMNQFKEMENK-GVRPDSITFLSVLTVCGR--NG 472
++ W A+I+ R+ DYE++ F EM + G+ P+S+T SVL C R +
Sbjct: 348 GMFRRTIAVWNAMIAGYVRNEFDYEAI-ELFVEMVFELGLSPNSVTLSSVLPACVRCESF 406
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ +G H S + + E + ++DM R+GR+E A + G +
Sbjct: 407 LDKEGIH---SCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSM 451
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 215/694 (30%), Positives = 355/694 (51%), Gaps = 80/694 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIG-VVFD 56
MN Y K G A +F+ + D+ SWNT++SG+ ++ D L + M+ G + +
Sbjct: 78 MNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPN 137
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF- 115
A T+ + C QL L KF + V AL+ M+ R G + A R+F
Sbjct: 138 AFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFS 197
Query: 116 ------------------------------DEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
++M +D VSWN +++ +Q G EA+
Sbjct: 198 QIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVR-EALG 256
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
++EM RKG+RLD ++TS+ +AC +L GKQ+H I+ V + L+ Y+
Sbjct: 257 LVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYA 316
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMI--SMNRE---DAVSLFKEMRLDGVCPNDVTFIG 260
KC +A +VF + DRN +SWT +I S+ E +V LF +MR + + +
Sbjct: 317 KCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALAT 376
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
LI + GR +H LC+K+ V N LI++YA+ +Q++E VF +S R+
Sbjct: 377 LISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERD 436
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAV---GAAED------- 370
I+SW ++I+ Y+Q G + A + F G+ NA T+ ++L A GA ED
Sbjct: 437 IVSWTSMITAYSQIGNIIKAREFFDGM---DTRNAITWNAMLGAYIQHGAEEDGLKMYSA 493
Query: 371 --------------ISL----------KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++L K G + H +K GL + V +A + MY K G
Sbjct: 494 MLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCG 553
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I E+Q++F+ K +W A+I+ ++HG + F +M +KG +PD I++++VL+
Sbjct: 554 RISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLS 613
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G++ +G+ FD M + + I P +H+SCMVD+LGR G L EA++L+ ++P P
Sbjct: 614 GCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTA 673
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +LL AC+IHGN E+ E A + +++ SGSY+L++ +Y++ G + A +RK M
Sbjct: 674 EVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLM 733
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPR 620
+ KG++K G+SW +V + +H F + D +HP+
Sbjct: 734 RDKGIKKNPGYSWMEVE--NKVHVFKADDVSHPQ 765
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/547 (22%), Positives = 242/547 (44%), Gaps = 51/547 (9%)
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
+ V N ++ Y++ G L +A +FD MP +D SWN ++SGY Q + ++ + +
Sbjct: 68 EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRF-LDGLETFV 126
Query: 149 EMMRKGLRLDHV-SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
M R G L + +F +CG EL Q+ G+ K + V L+ + +C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 208 EVTGDANKVFRR-------------------------------MHDRNVISWTTMISMNR 236
A+++F + M +R+V+SW MI+
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +A+ L EM GV + T+ + A + + G+ +H I++ +P
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + LI +YA+ S +++++VF+ L R +SW LI G Q +V+ F + E
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAEL 366
Query: 352 KP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + ++++ D+ L G++ HS +K G + +V ++L+ +Y K G +
Sbjct: 367 MAIDQFALATLISGCFNRMDLCL--GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 424
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF+ E+ +WT++I+A ++ G+ F M+ + ++IT+ ++L +
Sbjct: 425 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTR----NAITWNAMLGAYIQ 480
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ-IPGGPGL--S 527
+G G ++ +ML + P Y + +G + ++++G + G L S
Sbjct: 481 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVS 540
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V + + G + +++ D L + S+ M Y++ G + A M
Sbjct: 541 VANAAITMYSKCGRISEAQKLFDLLNGKDVV---SWNAMITGYSQHGMGKQAAKTFDDML 597
Query: 588 SKGVRKE 594
SKG + +
Sbjct: 598 SKGAKPD 604
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 45/296 (15%)
Query: 261 LIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
L+HA S G L R++ + N ++ N ++ YA+ S+ D+E++FD + R
Sbjct: 45 LLHAYFSCGALSDARRLLRADIKEPNVITH----NIMMNGYAKQGSLSDAEELFDRMPRR 100
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQ 377
++ SWN L+SGY Q L ++ F + + +S PNA+TF V+ + GA L
Sbjct: 101 DVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCREL--AP 158
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF------------- 424
+ K DP V +AL+DM+ + G + + R+F++ + + F
Sbjct: 159 QLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLY 218
Query: 425 ------------------AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+W +I+AL++ G + EM KGVR DS T+ S LT
Sbjct: 219 GIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLT 278
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
C R + G+ L +++ P D Y S ++++ + G +EA+ + +
Sbjct: 279 ACARLFSLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCGSFKEAKRVFNSL 331
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 213/648 (32%), Positives = 338/648 (52%), Gaps = 44/648 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++ + ++G D AL +FN + VS+N ++SG+ ++ + NL +FD +
Sbjct: 56 ISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNS-------KFNLARNLFDQMPE 108
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGL--DSEVYVGNALITMYSRWGRLVEARRVFDEM 118
S+ + G++ +L F L + +V N+L++ Y++ G + EAR VFD M
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM 168
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P K+S+SWN +L+ Y +G +E L E D +S+ +K L
Sbjct: 169 PEKNSISWNGLLAAYVHNGR--IEEACLLFESKSD---WDLISWNCLMGGFVRKKKLGDA 223
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
+ + KM +S N ++S Y++ A ++F R+V +WT M+S +
Sbjct: 224 RWLFD---KMPVRDAIS-WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQN 279
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP--- 290
+A + F EM N+V++ +I + R + F S P
Sbjct: 280 GMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIAREL--------FESMPCRN 327
Query: 291 -SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
S N +IT Y + + + K FD + R+ +SW A+I+GYAQ+G A+ F + +
Sbjct: 328 ISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ 387
Query: 350 ESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ + N TFG L+ A+ +L+ G++ H +K+G + VG+ALL MY K GSI
Sbjct: 388 DGESLNRATFGCALST--CADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSI 445
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E+ F +EK +W +++ ARHG + F+ M+ GV+PD IT + VL+ C
Sbjct: 446 DEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSAC 505
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +G F SM KDY + P+ HY+CM+D+LGR GRLEEA++L+ +P PG +
Sbjct: 506 SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAAS 565
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LLGA RIHGN E+GE+ A+ + KMEP SG YVL+SNLYA G W +R M+
Sbjct: 566 WGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRD 625
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
GV+K G+SW +V + +H FS GD +HP E IY E L +M+
Sbjct: 626 IGVQKVPGYSWVEVQ--NKIHTFSVGDCSHPEKERIYAYLEELDLKMR 671
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 180/407 (44%), Gaps = 39/407 (9%)
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
D ++ N I+ + R G A VF+ MP + SVS+NA++SGY ++ + + L
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL-FD 104
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
+M + L F+ G+ +N LG + V N L+S Y++
Sbjct: 105 QMPERDL------FSWNVMLTGYVRNCRLGDARRLFDLMP--EKDVVSWNSLLSGYAQNG 156
Query: 209 VTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIH 263
+A +VF M ++N ISW +++ E+A LF+ + + G +
Sbjct: 157 YVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVR 216
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
+G + R + + +S N +I+ YA+ + + ++FDE R++ +
Sbjct: 217 KKKLG----DARWLFDKMPVRDAIS----WNTMISGYAQGGGLSQARRLFDESPTRDVFT 268
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
W A++SGY QNG+ L + FF + E +Y NA+ A + Q I
Sbjct: 269 WTAMVSGYVQNGM-LDEAKTFFDEMPEKNEVSY------NAMIAG------YVQTKKMDI 315
Query: 384 IKVGLDSDPIVG----SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
+ +S P + ++ YG+ G I ++++ F+ ++ +W AII+ A+ G Y
Sbjct: 316 ARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHY 375
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
E +N F E++ G + TF L+ C + G+ + +K
Sbjct: 376 EEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVK 422
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 22/230 (9%)
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N I+ + R + VF+ + R +S+NA+ISGY +N A F + P
Sbjct: 53 NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF-----DQMP 107
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
F + G + L +R + + + D + ++LL Y + G + E++
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARR----LFDLMPEKDVVSWNSLLSGYAQNGYVDEARE 163
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF+ EK+ +W +++A +G E F+ + D I++ ++ R
Sbjct: 164 VFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDW----DLISWNCLMGGFVRKKK 219
Query: 474 IHKGRHLFDSMLKDYHIEPSPD--HYSCMVDMLGRVGRLEEAEELVGQIP 521
+ R LFD M P D ++ M+ + G L +A L + P
Sbjct: 220 LGDARWLFDKM-------PVRDAISWNTMISGYAQGGGLSQARRLFDESP 262
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 28/234 (11%)
Query: 295 CLITMYARFESMQDSEKVFDELSCR----EIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
C I S + SE V + R +I+ WN IS + +NG +A+ F + +
Sbjct: 19 CTINFGHTSTSTRRSESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRR 78
Query: 351 SKP--NAYTFGSVLNA-VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
S NA G + N+ A ++ + +R D + +L Y +
Sbjct: 79 SSVSYNAMISGYLRNSKFNLARNLFDQMPER------------DLFSWNVMLTGYVRNCR 126
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +++R+F+ EK +W +++S A++G + F M K +SI++ +L
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAA 182
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
NG I + LF+S D+ + ++C++ R +L +A L ++P
Sbjct: 183 YVHNGRIEEACLLFESK-SDWDLIS----WNCLMGGFVRKKKLGDARWLFDKMP 231
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
D D + + + + + G + VFN +S ++ A+IS R+ + N F +
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD--HYSCMVDMLGR 506
M + D ++ +LT RN + R LFD M P D ++ ++ +
Sbjct: 106 MPER----DLFSWNVMLTGYVRNCRLGDARRLFDLM-------PEKDVVSWNSLLSGYAQ 154
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
G ++EA E+ +P +S LL A +G +E
Sbjct: 155 NGYVDEAREVFDNMPEKNSIS-WNGLLAAYVHNGRIE 190
>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
Length = 623
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/580 (33%), Positives = 310/580 (53%), Gaps = 15/580 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDA 57
+ MY + G D A F ++ ++ SW ++S ++ +A L M+L G +
Sbjct: 44 VQMYGRCGSLDDARAAFRGIHQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANK 103
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ + L C G ++H + GL++++ GNAL+ MY+ L EAR VF+
Sbjct: 104 ITFISLLGACSVTGDLSLGKKIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFER 163
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSW I+S Y G Y +EA+ M ++ R D V+ S AC + L
Sbjct: 164 MVFRDVVSWTIIISAYAHAG-YPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVE 222
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GK IH + G T V VG ++S Y KCE DA +VF R+ D++++ W MI
Sbjct: 223 GKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQ 282
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E A +L+ EM + + PNDVT I L+ + S ++ G +H +LS SV
Sbjct: 283 NHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSV 342
Query: 293 CNCLITMYARFESMQDSEKVFDELSCR--EIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
N LI MYA+ S++++ +VF E + R +I+WN +I AQ L+L A+Q + + +E
Sbjct: 343 VNALINMYAKCGSLENATRVFIEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRMNQE 402
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
K + T+G+VL D + G+ HS + G SD +V ++L+ +YG G++
Sbjct: 403 GIKASDVTYGTVLAVCANFGDFTT--GREVHSRSLATGCCSD-VVQNSLICLYGGCGNLE 459
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+Q F K+ +W++I++A AR+G+ + N F M GV P+ +TF SVL C
Sbjct: 460 AAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACS 519
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G+ +G F SM D+H+EP+P+HY CMV++L + GR+++A + +P P S
Sbjct: 520 HAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAW 579
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNL 569
+SLLGAC +H + E G A L+ EP S +YVL+ N+
Sbjct: 580 RSLLGACEVHTDKEYGALAAKQLLDAEPRNSAAYVLLYNI 619
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 209/413 (50%), Gaps = 11/413 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G ++HS ++ GLD + Y+GN L+ MY R G L +AR F + ++ SW ++S Q
Sbjct: 21 GRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNVFSWTILISLLVQ 80
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+G+ E + L M +G + ++F S AC +L LGK+IH G T +
Sbjct: 81 NGE-ASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVRAKGLETDII 139
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDG 250
GN L++ Y+ C+ +A VF RM R+V+SWT +IS +A+ L++ M +
Sbjct: 140 TGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEF 199
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
P+ VT I ++ A + + EG+ IH + + ++ V +++ Y + E++ D+
Sbjct: 200 SRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDAR 259
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAE 369
+VFD + ++I+ WNA+I YAQN A + +++ + +PN T ++L++ +
Sbjct: 260 QVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSST- 318
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE--FAWT 427
++ G H G S V +AL++MY K GS+ + RVF E ++ W
Sbjct: 319 -CKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTTNVITWN 377
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+I A A+ + + M +G++ +T+ +VL VC G GR +
Sbjct: 378 TMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGREV 430
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 180/357 (50%), Gaps = 23/357 (6%)
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
G+ K+L G+++H I G +GN+L+ Y +C DA FR +H RNV SWT
Sbjct: 13 GNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNVFSWT 72
Query: 230 TMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
+IS+ + + L K M L+G N +TFI L+ A S+ + G+ IH
Sbjct: 73 ILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVRAK 132
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
++ N L+ MY +S+ ++ VF+ + R+++SW +IS YA G L A+Q +
Sbjct: 133 GLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLY 192
Query: 345 FGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ +E S+P+A T SVL A + +L G+ H I+ G+++D VG+A++ YG
Sbjct: 193 RRMEQEFSRPDAVTLISVLEACASLR--TLVEGKTIHERIVASGVETDVFVGTAVVSFYG 250
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K ++ ++++VF+ +K W A+I A A++ E + EM +RP+ +T ++
Sbjct: 251 KCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLIT 310
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY-------SCMVDMLGRVGRLEEA 513
+L C + +G L H E + Y + +++M + G LE A
Sbjct: 311 LLDSCSSTCKMERGSSL--------HREAAARGYLSHTSVVNALINMYAKCGSLENA 359
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
T+ ++L G ++ SL G+R HS +I GLD D +G+ L+ MYG+ GS+ +++ F
Sbjct: 4 TYEALLKQYGNSK--SLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFR 61
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
+++ F+WT +IS L ++G+ + K M+ +G + ITF+S+L C G +
Sbjct: 62 GIHQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSL 121
Query: 477 GRHLFD 482
G+ + +
Sbjct: 122 GKKIHE 127
>gi|6729044|gb|AAF27040.1|AC009177_30 hypothetical protein [Arabidopsis thaliana]
Length = 770
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/590 (33%), Positives = 324/590 (54%), Gaps = 25/590 (4%)
Query: 54 VFDAVTYSTALSFCLDHEGFL--FGLQLHSLIVKFG-----LDSEVY-----VGNALITM 101
+ + V S LS C EG+ G LH+ I+K +D++++ V N+L+++
Sbjct: 41 LLNHVDMSLLLSIC-GREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSL 99
Query: 102 YSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVS 161
Y++ G+LV+A ++FDEMP +D +S N + G+ ++ + E+ L++ M DH +
Sbjct: 100 YAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRE--TESGFVLLKRMLGSGGFDHAT 157
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
T S C + + K IH ++I GY +SVGN L+++Y KC + VF M
Sbjct: 158 LTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMS 217
Query: 222 DRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
RNVI+ T +IS ED + LF MR V PN VT++ + A S + EG+
Sbjct: 218 HRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQ 277
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
IH L K SE + + L+ MY++ S++D+ +F+ + + +S ++ G AQNG
Sbjct: 278 IHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGS 337
Query: 337 SLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A+Q F +++ + +A +VL + D SL G++ HS +IK + V
Sbjct: 338 EEEAIQFFIRMLQAGVEIDANVVSAVLGV--SFIDNSLGLGKQLHSLVIKRKFSGNTFVN 395
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+ L++MY K G + +SQ VF +++ +W ++I+A ARHG + + ++EM V+
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P +TFLS+L C G+I KGR L + M + + IEP +HY+C++DMLGR G L+EA+
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKS 515
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
+ +P P + Q+LLGAC HG+ E+GE A+ L + P S +++L++N+Y+ +G
Sbjct: 516 FIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGK 575
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
W+ A K MK+ GV KE G S ++ H F D HP++E IY
Sbjct: 576 WKERAKTIKRMKAMGVTKETGISSIEIE--HKTHSFVVEDKLHPQAEAIY 623
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 232/452 (51%), Gaps = 17/452 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS-FALRMNLIGVV-FDAV 58
+++Y K G+ A+ +F+ + D++S N V GF ++ + S F L ++G FD
Sbjct: 97 LSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHA 156
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T + LS C E L +H+L + G D E+ VGN LIT Y + G V R VFD M
Sbjct: 157 TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGM 216
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLEL 177
+++ ++ A++SG ++ + E L L +MR+GL + V++ SA +AC + +
Sbjct: 217 SHRNVITLTAVISGLIENELH--EDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVE 274
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+QIH + K G + + + + LM YSKC DA +F + + +S T ++
Sbjct: 275 GQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQ 334
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + E+A+ F M GV D + + +S I N + G+ +H L IK F
Sbjct: 335 NGSEEEAIQFFIRMLQAGV-EIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
V N LI MY++ + DS+ VF + R +SWN++I+ +A++G LAA++ + + E
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIF 409
KP TF S+L+A I G+ + + +V G++ + ++DM G+ G +
Sbjct: 454 VKPTDVTFLSLLHACSHVGLID--KGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLK 511
Query: 410 ESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
E++ + K + W A++ A + HGD E
Sbjct: 512 EAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 213/648 (32%), Positives = 338/648 (52%), Gaps = 44/648 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++ + ++G D AL +FN + VS+N ++SG+ ++ + NL +FD +
Sbjct: 56 ISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNS-------KFNLARNLFDQMPE 108
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGL--DSEVYVGNALITMYSRWGRLVEARRVFDEM 118
S+ + G++ +L F L + +V N+L++ Y++ G + EAR VFD M
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM 168
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P K+S+SWN +L+ Y +G +E L E D +S+ +K L
Sbjct: 169 PEKNSISWNGLLAAYVHNGR--IEEACLLFESKSD---WDLISWNCLMGGFVRKKKLGDA 223
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
+ + KM +S N ++S Y++ A ++F R+V +WT M+S +
Sbjct: 224 RWLFD---KMPVRDAIS-WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQN 279
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP--- 290
+A + F EM N+V++ +I + R + F S P
Sbjct: 280 GMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIAREL--------FESMPCRN 327
Query: 291 -SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
S N +IT Y + + + K FD + R+ +SW A+I+GYAQ+G A+ F + +
Sbjct: 328 ISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ 387
Query: 350 ESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ + N TFG L+ A+ +L+ G++ H +K+G + VG+ALL MY K GSI
Sbjct: 388 DGESLNRATFGCALST--CADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSI 445
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E+ F +EK +W +++ ARHG + F+ M+ GV+PD IT + VL+ C
Sbjct: 446 DEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSAC 505
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +G F SM KDY + P+ HY+CM+D+LGR GRLEEA++L+ +P PG +
Sbjct: 506 SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAAS 565
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LLGA RIHGN E+GE+ A+ + KMEP SG YVL+SNLYA G W +R M+
Sbjct: 566 WGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRD 625
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
GV+K G+SW +V + +H FS GD +HP E IY E L +M+
Sbjct: 626 IGVQKVPGYSWVEVQ--NKIHTFSVGDCSHPEKERIYAYLEELDLKMR 671
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 180/407 (44%), Gaps = 39/407 (9%)
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
D ++ N I+ + R G A VF+ MP + SVS+NA++SGY ++ + + L
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL-FD 104
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
+M + L F+ G+ +N LG + V N L+S Y++
Sbjct: 105 QMPERDL------FSWNVMLTGYVRNCRLGDARRLFDLMP--EKDVVSWNSLLSGYAQNG 156
Query: 209 VTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIH 263
+A +VF M ++N ISW +++ E+A LF+ + + G +
Sbjct: 157 YVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVR 216
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
+G + R + + +S N +I+ YA+ + + ++FDE R++ +
Sbjct: 217 KKKLG----DARWLFDKMPVRDAIS----WNTMISGYAQGGGLSQARRLFDESPTRDVFT 268
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
W A++SGY QNG+ L + FF + E +Y NA+ A + Q I
Sbjct: 269 WTAMVSGYVQNGM-LDEAKTFFDEMPEKNEVSY------NAMIAG------YVQTKKMDI 315
Query: 384 IKVGLDSDPIVG----SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
+ +S P + ++ YG+ G I ++++ F+ ++ +W AII+ A+ G Y
Sbjct: 316 ARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHY 375
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
E +N F E++ G + TF L+ C + G+ + +K
Sbjct: 376 EEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVK 422
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 69/150 (46%), Gaps = 40/150 (26%)
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L V G++ G F M ++Y + P+ HY+CM+D+LGRV RLEE
Sbjct: 771 LLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG----------- 819
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+LLGA RIHGN E+GE+ A KM P SG
Sbjct: 820 ------ALLGASRIHGNTELGEKAAQMFFKMGPQNSGI---------------------S 852
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSG 614
M+ GV+K G+SW +V + +H FS G
Sbjct: 853 KMRDVGVQKVPGYSWFEVQ--NKIHTFSVG 880
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 22/230 (9%)
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N I+ + R + VF+ + R +S+NA+ISGY +N A F + P
Sbjct: 53 NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF-----DQMP 107
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
F + G + L +R + + + D + ++LL Y + G + E++
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARR----LFDLMPEKDVVSWNSLLSGYAQNGYVDEARE 163
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF+ EK+ +W +++A +G E F+ + D I++ ++ R
Sbjct: 164 VFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDW----DLISWNCLMGGFVRKKK 219
Query: 474 IHKGRHLFDSMLKDYHIEPSPD--HYSCMVDMLGRVGRLEEAEELVGQIP 521
+ R LFD M P D ++ M+ + G L +A L + P
Sbjct: 220 LGDARWLFDKM-------PVRDAISWNTMISGYAQGGGLSQARRLFDESP 262
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 28/234 (11%)
Query: 295 CLITMYARFESMQDSEKVFDELSCR----EIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
C I S + SE V + R +I+ WN IS + +NG +A+ F + +
Sbjct: 19 CTINFGHTSTSTRRSESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRR 78
Query: 351 SKP--NAYTFGSVLNA-VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
S NA G + N+ A ++ + +R D + +L Y +
Sbjct: 79 SSVSYNAMISGYLRNSKFNLARNLFDQMPER------------DLFSWNVMLTGYVRNCR 126
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +++R+F+ EK +W +++S A++G + F M K +SI++ +L
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAA 182
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
NG I + LF+S D+ + ++C++ R +L +A L ++P
Sbjct: 183 YVHNGRIEEACLLFESK-SDWDLIS----WNCLMGGFVRKKKLGDARWLFDKMP 231
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
D D + + + + + G + VFN +S ++ A+IS R+ + N F +
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD--HYSCMVDMLGR 506
M + D ++ +LT RN + R LFD M P D ++ ++ +
Sbjct: 106 MPER----DLFSWNVMLTGYVRNCRLGDARRLFDLM-------PEKDVVSWNSLLSGYAQ 154
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
G ++EA E+ +P +S LL A +G +E
Sbjct: 155 NGYVDEAREVFDNMPEKNSIS-WNGLLAAYVHNGRIE 190
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/554 (33%), Positives = 311/554 (56%), Gaps = 17/554 (3%)
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR-LVEARRVFD 116
V Y++ L C F GLQ+H+ ++K GL+ + +VGN+L+T+Y + G E R+VFD
Sbjct: 60 VLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFD 119
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ KD +SW +++SGY + G + ++ +M+ G+ + + ++ AC +L+
Sbjct: 120 GLFVKDVISWTSMISGYVRVGK-PMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLK 178
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MN 235
LG+ HGV + G+ ++ + + L+ + + DA ++F + + + I WT++IS +
Sbjct: 179 LGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALT 238
Query: 236 RED----AVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLS 288
R D A+ F M+ D G+CP+ TF ++ A GNL +K+G+ +H I T F
Sbjct: 239 RNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTAC--GNLGRLKQGKEVHAKVITTGFCG 296
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
V + L+ MY + S+ +S+++FD + + +SW+AL+ GY QNG + +Q F
Sbjct: 297 NVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIF---R 353
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
K K + Y FG++L +++ G+ H I+ G D IV SAL+D+Y K G I
Sbjct: 354 KMEKVDLYCFGTILRTCAGLA--AVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCI 411
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+Q +F++ ++ W ++I A++G E + F +M +G++PD I+F+ +L C
Sbjct: 412 EYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFAC 471
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +GR F SM KDY I+ +HYSCMVD+LGR G LEEAE L+ S+
Sbjct: 472 SHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSL 531
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LLGAC N E+ ERIA +M++EP SYVL++N+Y G W +R+ MK
Sbjct: 532 WAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKD 591
Query: 589 KGVRKEVGFSWADV 602
+GV K G SW +
Sbjct: 592 RGVNKMPGKSWIET 605
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 237/456 (51%), Gaps = 26/456 (5%)
Query: 1 MNMYCKSG-QFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFD 56
+ +Y K G F + +F+ L D++SW +++SG+ K ++L +M GV +
Sbjct: 101 LTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPN 160
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
A T S + C + G H +++ G DS + +ALI M+ R L +AR++FD
Sbjct: 161 AFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFD 220
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNL 175
E+ D++ W +I+S T++ D+ EA+ M R G+ D +F + +ACG+ L
Sbjct: 221 ELLEPDAICWTSIISALTRN-DFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRL 279
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
+ GK++H I G+ +V V + L+ Y KC G++ ++F RM +N +SW+ ++
Sbjct: 280 KQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGY 339
Query: 233 --SMNREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + + + +F++M ++D C F ++ + V++G+ +H I+ +
Sbjct: 340 CQNGDFKSVIQIFRKMEKVDLYC-----FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRD 394
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + L+ +YA+ ++ ++ +FD++ R +I+WN++I G+AQNG A++ F ++K
Sbjct: 395 VIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVK 454
Query: 350 ES-KPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
E KP+ +F +L A G ++ + IKVG++ S ++D+ G+
Sbjct: 455 EGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHY----SCMVDLLGRA 510
Query: 406 GSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
G + E++ + + + + + W A++ A +YE
Sbjct: 511 GLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYE 546
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 162/307 (52%), Gaps = 16/307 (5%)
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
A+ L K + + V + L+ + G IH IK+ + V N L+T
Sbjct: 43 ALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 102
Query: 299 MYARFES-MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
+Y + + ++ KVFD L +++ISW ++ISGY + G + +++ F+ ++ +PNA+
Sbjct: 103 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 162
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
T +V+ A D LK G+ H ++ G DS+ ++ SAL+DM+G+ ++ +++++F+
Sbjct: 163 TLSAVIKACSELGD--LKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFD 220
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCGRNGMIH 475
E E WT+IISAL R+ ++ + F M+ + G+ PD TF +VLT CG G +
Sbjct: 221 ELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLK 280
Query: 476 KGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G+ + ++ + +E S +VDM G+ G + E++ + ++P +S
Sbjct: 281 QGKEVHAKVITTGFCGNVVVESS------LVDMYGKCGSVGESQRIFDRMPIKNSVSWSA 334
Query: 531 SLLGACR 537
L G C+
Sbjct: 335 LLGGYCQ 341
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/609 (30%), Positives = 318/609 (52%), Gaps = 15/609 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVL-----SGFEKSDDALSFALRMNLIGVVF 55
++ Y G A + + PD ++ +L +G AL +R
Sbjct: 62 LSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAAQ 121
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
V S AL C+ F +G +LH +VK G ++ +V N+L+ MY++ G L AR+VF
Sbjct: 122 ADVVLSLALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKVF 180
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D +P ++ VSW ++LSG Q+G E ++ EM + + + S +AC L
Sbjct: 181 DRVPERNVVSWTSMLSGSIQNG-IAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGL 239
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
G+ IHG IK G T+ + L+ Y+KCE DA +VF + +++ WT MI
Sbjct: 240 HQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGY 299
Query: 233 SMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ N+ DA+ LF + + PN VT +I A + + GR +H + +K +
Sbjct: 300 TQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESD 359
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
V N L+ MYA+ +++ ++ +F + +++++WN++++GY++NG++ ++ F + ++
Sbjct: 360 VVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQ 419
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+A + + L+A D+ + G+ H++ IK S+ V +ALL++Y K +
Sbjct: 420 GISPDAISVVNALSACVCLADLHI--GKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLP 477
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+QRVFN+ +++ W+A+I GD ++ F EM + + P+ + F S+L+ C
Sbjct: 478 SAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACS 537
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
GM+ G+ FDSM + ++I PS HY+CMVD++ R G LEEA E + +P G+SV
Sbjct: 538 HTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVW 597
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
S L C++H +E GE + + P YVLMSNLY G W+ +R+ M+ +
Sbjct: 598 GSFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQ 657
Query: 590 GVRKEVGFS 598
G+ K G S
Sbjct: 658 GLVKLPGCS 666
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/544 (34%), Positives = 307/544 (56%), Gaps = 11/544 (2%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
+SFC F G+Q HS I+K G S VY+ +A++ MY++ G + AR +FD+MP +
Sbjct: 76 VSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVLFDQMPQRTV 135
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
V+WN+++ GY + AI I+M++ + + S +S + C + E+G Q+HG
Sbjct: 136 VTWNSLIYGYLAVNCPKI-AIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVGTQVHG 194
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNRED 238
+ +K G G +V VG L+ YSKC D+ VF M +RNVI+WT+M++ ++
Sbjct: 195 LILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQIEKPDE 254
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
A++L KEM L + PN VT+ L+ + S + + +H I+ S + L+T
Sbjct: 255 AMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYIAATLVT 314
Query: 299 MYARFES-MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
+Y++ S ++D +KV + + I+WNA+I+GY++ G A++ F + + ++Y
Sbjct: 315 VYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQAGIDIDSY 374
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
T SV+ A+G + L+ G+ H+ I + G S V + L+ MY + G+I +S+RVF
Sbjct: 375 TLTSVVGAIGNSS--FLEEGKAMHALIHRTGYISHLNVQNGLVSMYARCGAIGDSKRVFW 432
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
+E +W A+++A A HG + F++M ++P+S TFL+VL C G + K
Sbjct: 433 FMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCACSHVGFVDK 492
Query: 477 GRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
G FD+M D +EP +HY+ +VD GR G L EAE + +P P SV ++LL A
Sbjct: 493 GIEYFDTMKSDILLEPLKVEHYASLVDTFGRAGYLNEAEAFINSMPIVPAPSVYKALLSA 552
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
+HGN E+ R A L+++ P +YVL+S++ G+W+ A LRK M +G+RK+
Sbjct: 553 SLVHGNREIAARSAKKLLELWPNDPATYVLLSSVLTVDGNWDDAADLRKLMCDRGLRKKP 612
Query: 596 GFSW 599
G+SW
Sbjct: 613 GYSW 616
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 258/484 (53%), Gaps = 18/484 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G+ A +F+ + +V+WN+++ G+ + A+ ++M + A
Sbjct: 111 VDMYAKCGEISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSA 170
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S+ L+ C E G Q+H LI+K GL V VG +L+ MYS+ G + ++R VFD
Sbjct: 171 FSVSSCLAGCSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDH 230
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M N++ ++W ++++GY+Q + EA+ + EM+ + LR + V++ S S+ L
Sbjct: 231 MVNRNVITWTSMVTGYSQI-EKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSY 289
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT-GDANKVFRRMHDRNVISWTTMIS--- 233
Q+H I++G ++V + L++ YSKC + D KV + + I+W +I+
Sbjct: 290 CLQVHCCIIQLGLESNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYS 349
Query: 234 -MNR-EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ R E+A+ F EM+ G+ + T ++ AI + ++EG+ +H L +T ++S +
Sbjct: 350 KLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLN 409
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
V N L++MYAR ++ DS++VF + ++ISWNAL++ +A +G AV+ F + K E
Sbjct: 410 VQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTE 469
Query: 351 SKPNAYTFGSVLNAVGAA--EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
KPN+ TF +VL A D +++ S I+ L + ++L+D +G+ G +
Sbjct: 470 IKPNSSTFLAVLCACSHVGFVDKGIEYFDTMKSDILLEPLKVEHY--ASLVDTFGRAGYL 527
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKE-MENKGVRPDSITFL-SVL 465
E++ N + + A++SA HG+ E K+ +E P + L SVL
Sbjct: 528 NEAEAFINSMPIVPAPSVYKALLSASLVHGNREIAARSAKKLLELWPNDPATYVLLSSVL 587
Query: 466 TVCG 469
TV G
Sbjct: 588 TVDG 591
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 168/341 (49%), Gaps = 13/341 (3%)
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
+ E R G + S C + LG Q H +K+G+ ++V + + ++ Y+K
Sbjct: 57 IAEFTRHGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAK 116
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMI----SMN-REDAVSLFKEMRLDGVCPNDVTFIGL 261
C A +F +M R V++W ++I ++N + A+ LF +M + + +
Sbjct: 117 CGEISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSC 176
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
+ S + G +HGL +KT V L+ MY++ + DS VFD + R +
Sbjct: 177 LAGCSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNV 236
Query: 322 ISWNALISGYAQ---NGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQR 378
I+W ++++GY+Q ++A V+ V+++ +PN T+ S+L++ + L + +
Sbjct: 237 ITWTSMVTGYSQIEKPDEAMALVKEM--VLQDLRPNCVTYNSLLSSFSGPD--CLSYCLQ 292
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES-QRVFNETQEKSEFAWTAIISALARHG 437
H II++GL+S+ + + L+ +Y K S E ++V + AW A+I+ ++ G
Sbjct: 293 VHCCIIQLGLESNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLG 352
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+E + F EM+ G+ DS T SV+ G + + +G+
Sbjct: 353 RHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGK 393
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/551 (35%), Positives = 304/551 (55%), Gaps = 15/551 (2%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+ LI Y G + EAR +FDEMP +D V+W +++GYT ++ A + EMM +
Sbjct: 45 LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNH-THAWMVFCEMMNE 103
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT-GD 212
L + + +S AC K L G+ +HG++IK G + V N LM Y+ C V+ D
Sbjct: 104 ELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDD 163
Query: 213 ANKVFRRMHDRNVISWTTMIS--MNREDA---VSLFKEMRLDGVCPNDVTF-IGLIHAIS 266
A VFR +H +N +SWTT+I+ +R+D + +F++M L+ V N +F I + S
Sbjct: 164 ACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTS 223
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNA 326
IG+ G +H K F S V N ++ MY R ++ + F E++ R++I+WN
Sbjct: 224 IGSHTF-GEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNT 282
Query: 327 LISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
LI+GY ++ + ++ F + E PN +TF S++ A A L GQ+ H II+
Sbjct: 283 LIAGYERSNPT-ESLYVFSMMESEGFSPNCFTFTSIMAA--CATLAFLNCGQQIHGRIIR 339
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
GLD + + +AL+DMY K G+I +S +VF + +WTA++ HG E +
Sbjct: 340 RGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVEL 399
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLG 505
F +M G+RPD + F+++L+ C G++ +G F M+ DY+I P + Y C+VD+LG
Sbjct: 400 FDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLG 459
Query: 506 RVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVL 565
R G++EEA EL+ +P P V LGAC+ H +G+ A ++ + P +G+YV+
Sbjct: 460 RAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVM 519
Query: 566 MSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+SN+YA G W A LRK MK G +KE G SW +VG + ++ F GD + E IY
Sbjct: 520 LSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVG--NHVYSFVVGDEVGSKIEGIY 577
Query: 626 RMAECLGSEMK 636
++ E L MK
Sbjct: 578 QVLENLIGHMK 588
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 220/445 (49%), Gaps = 16/445 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA----LSFALRMNLIGVVFDAVT 59
Y G +A +F+ + D+V+W +++G+ ++ + F MN + +A T
Sbjct: 53 YFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNE-ELDPNAFT 111
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWG-RLVEARRVFDEM 118
S+ L C + +G +H L +K GLD +YV NAL+ MY+ + +A VF +
Sbjct: 112 ISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGI 171
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K+ VSW +++GYT D G + +M+ + + L+ SF+ A AC + G
Sbjct: 172 HLKNEVSWTTLIAGYTHRDD-GYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFG 230
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----M 234
+Q+H K G+ +++ V N ++ Y +C +AN+ F M+ R++I+W T+I+
Sbjct: 231 EQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERS 290
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
N +++ +F M +G PN TF ++ A + + G+ IHG I+ ++ N
Sbjct: 291 NPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSN 350
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI MY++ ++ DS +VF +S R+++SW A++ GY +G AV+ F +++ +P
Sbjct: 351 ALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRP 410
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSIFESQ 412
+ F ++L+A A + G R ++ + D + ++D+ G+ G + E+
Sbjct: 411 DRVVFMAILSACSHAGLVD--EGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAY 468
Query: 413 RVFNETQEKS-EFAWTAIISALARH 436
+ K E W + A H
Sbjct: 469 ELIESMPFKPDECVWGPFLGACKAH 493
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 164/326 (50%), Gaps = 12/326 (3%)
Query: 1 MNMYCKSG-QFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFD 56
M+MY D A +F ++ + VSW T+++G+ DD L +M L V +
Sbjct: 151 MDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELN 210
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++S A+ C FG QLH+ + K G +S + V N+++ MY R EA R F
Sbjct: 211 PFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFY 270
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
EM +D ++WN +++GY + E++ M +G + +FTS +AC L
Sbjct: 271 EMNQRDLITWNTLIAGYERSNP--TESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLN 328
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
G+QIHG I+ G ++++ N L+ YSKC D+++VF M R+++SWT M+
Sbjct: 329 CGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYG 388
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI-KTNFLSEP 290
E+AV LF +M G+ P+ V F+ ++ A S LV EG L + N +
Sbjct: 389 THGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQ 448
Query: 291 SVCNCLITMYARFESMQDSEKVFDEL 316
+ C++ + R ++++ ++ + +
Sbjct: 449 EIYGCVVDLLGRAGKVEEAYELIESM 474
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%)
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
++ + L+ Y +G I E++ +F+E E+ AWT +I+ ++ F EM N+
Sbjct: 44 VLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNE 103
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGR 478
+ P++ T SVL C + GR
Sbjct: 104 ELDPNAFTISSVLKACKGMKCLSYGR 129
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 317/582 (54%), Gaps = 21/582 (3%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D VT+ L+ + + G Q+H + +K GLD + V N+LI MY + + AR VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH-EKN 174
D M +D +SWN++++G Q+G VEA+ ++++R GL+ D + TS A +
Sbjct: 374 DNMSERDLISWNSVIAGIAQNG-LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEG 432
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L L KQ+H +IK+ + V L+ YS+ +A +F R H+ ++++W M+
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAG 491
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
S + + LF M G +D T + + +G+ +H IK+ + +
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF----- 344
V + ++ MY + M ++ FD + + ++W +ISG +NG A F
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
GV+ P+ +T ++ A +L+ G++ H++ +K+ +DP VG++L+DMY K
Sbjct: 612 MGVL----PDEFTIATLAKASSCL--TALEQGRQIHANALKLNCTNDPFVGTSLVDMYAK 665
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GSI ++ +F + + AW A++ LA+HG+ + + FK+M++ G++PD +TF+ V
Sbjct: 666 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGV 725
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L+ C +G++ + SM DY I+P +HYSC+ D LGR G +++AE L+ +
Sbjct: 726 LSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEA 785
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
S+ ++LL ACR+ G+ E G+R+A L+++EP S +YVL+SN+YA W+ + + R
Sbjct: 786 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 845
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
MK V+K+ GFSW +V + +H F D ++ ++E IYR
Sbjct: 846 MMKGHKVKKDPGFSWIEVK--NKIHIFVVDDRSNRQTELIYR 885
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 155/561 (27%), Positives = 262/561 (46%), Gaps = 58/561 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL------SFAL-RMNLIGV 53
++MY K G A +F+ + + D+VSWN++L+ + +S + + +F L R+ V
Sbjct: 81 ISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDV 140
Query: 54 VFDA-VTYSTALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
V+ + +T S L CL H G+++ + H K GLD + +V AL+ +Y ++G++ E
Sbjct: 141 VYTSRMTLSPMLKLCL-HSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEG 199
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG- 170
+ +F+EMP +D V WN +L Y +EM G + + + +SA + G
Sbjct: 200 KVLFEEMPYRDVVLWNLMLKAY--------------LEM---GFKEEAIDLSSAFHSSGL 242
Query: 171 --HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
+E L L +I G G + GN DA+ V + +S
Sbjct: 243 NPNEITLRLLARISGDDSDAGQVKSFANGN-------------DASSVSEIIFRNKGLS- 288
Query: 229 TTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ S + F +M V + VTFI ++ + + G+ +H + +K
Sbjct: 289 EYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL 348
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+V N LI MY + + VFD +S R++ISWN++I+G AQNGL + AV F ++
Sbjct: 349 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL 408
Query: 349 KES-KPNAYTFGSVLNAVGA-AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ KP+ YT SVL A + E +SL ++ H H IK+ SD V +AL+D Y +
Sbjct: 409 RCGLKPDQYTMTSVLKAASSLPEGLSL--SKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ E++ +F E AW A+++ + D + F M +G R D T +V
Sbjct: 467 CMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 467 VCGRNGMIHKGRHLFDSMLKD-YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
CG I++G+ + +K Y ++ S ++DM + G + A+ IP
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIP---- 579
Query: 526 LSVLQSLLGACRIHGNVEMGE 546
V + I G +E GE
Sbjct: 580 --VPDDVAWTTMISGCIENGE 598
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 184/402 (45%), Gaps = 42/402 (10%)
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
+ G H+ I+ F + E ++ N LI+MYS+ G L ARRVFD+MP++D VSWN+IL+
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 133 YTQDGDYGVEAI---LALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
Y Q + VE I L ++R+ + ++ + C H + + HG + K+
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLF 243
G V L++ Y K + +F M R+V+ W M+ +E+A+ L
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
G+ PN++T + L+ IS G+ G++ F
Sbjct: 235 SAFHSSGLNPNEIT-LRLLARIS-GDDSDAGQV------------------------KSF 268
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLN 363
+ D+ V EII N +S Y +G A ++ F ++ ES +L
Sbjct: 269 ANGNDASSV------SEIIFRNKGLSEYLHSGQYSALLKCFADMV-ESDVECDQVTFILM 321
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
A + SL GQ+ H +K+GLD V ++L++MY K ++ VF+ E+
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDL 381
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
+W ++I+ +A++G + F ++ G++PD T SVL
Sbjct: 382 ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVL 423
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 269 NLVKEGRMIHGLCIKTNFLS-----EPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
N + ++ G C L+ E + N LI+MY++ S+ + +VFD++ R+++S
Sbjct: 48 NAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVS 107
Query: 324 WNALISGYAQNGLSLAA--VQAF--FGVIKES--KPNAYTFGSVLNA------VGAAEDI 371
WN++++ YAQ+ + QAF F ++++ + T +L V A+E
Sbjct: 108 WNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF 167
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
HG C K+GLD D V AL+++Y K G + E + +F E + W ++
Sbjct: 168 ---HGYAC-----KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
A G E ++ + G+ P+ IT + + G
Sbjct: 220 AYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISG 257
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G D A C+F + +I +WN +L G + + L +M +G+ D
Sbjct: 660 VDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDK 719
Query: 58 VTYSTALSFCLDHEGFLFGLQLH--SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT+ LS C H G + H S+ +G+ E+ + L R G + +A +
Sbjct: 720 VTFIGVLSAC-SHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLI 778
Query: 116 DEMPNKDSVS-WNAILSGYTQDGD 138
+ M + S S + +L+ GD
Sbjct: 779 ESMSMEASASMYRTLLAACRVQGD 802
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/554 (33%), Positives = 311/554 (56%), Gaps = 17/554 (3%)
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR-LVEARRVFD 116
V Y++ L C F GLQ+H+ ++K GL+ + +VGN+L+T+Y + G E R+VFD
Sbjct: 119 VLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFD 178
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ KD +SW +++SGY + G + ++ +M+ G+ + + ++ AC +L+
Sbjct: 179 GLFVKDVISWTSMISGYVRVGK-PMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLK 237
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MN 235
LG+ HGV + G+ ++ + + L+ + + DA ++F + + + I WT++IS +
Sbjct: 238 LGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALT 297
Query: 236 RED----AVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLS 288
R D A+ F M+ D G+CP+ TF ++ A GNL +K+G+ +H I T F
Sbjct: 298 RNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTAC--GNLGRLKQGKEVHAKVITTGFCG 355
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
V + L+ MY + S+ +S+++FD + + +SW+AL+ GY QNG + +Q F
Sbjct: 356 NVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFR--- 412
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
K K + Y FG++L +++ G+ H I+ G D IV SAL+D+Y K G I
Sbjct: 413 KMEKVDLYCFGTILRTCAGLA--AVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCI 470
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+Q +F++ ++ W ++I A++G E + F +M +G++PD I+F+ +L C
Sbjct: 471 EYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFAC 530
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +GR F SM KDY I+ +HYSCMVD+LGR G LEEAE L+ S+
Sbjct: 531 SHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSL 590
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LLGAC N E+ ERIA +M++EP SYVL++N+Y G W +R+ MK
Sbjct: 591 WAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKD 650
Query: 589 KGVRKEVGFSWADV 602
+GV K G SW +
Sbjct: 651 RGVNKMPGKSWIET 664
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 237/456 (51%), Gaps = 26/456 (5%)
Query: 1 MNMYCKSG-QFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFD 56
+ +Y K G F + +F+ L D++SW +++SG+ K ++L +M GV +
Sbjct: 160 LTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPN 219
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
A T S + C + G H +++ G DS + +ALI M+ R L +AR++FD
Sbjct: 220 AFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFD 279
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNL 175
E+ D++ W +I+S T++ D+ EA+ M R G+ D +F + +ACG+ L
Sbjct: 280 ELLEPDAICWTSIISALTRN-DFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRL 338
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
+ GK++H I G+ +V V + L+ Y KC G++ ++F RM +N +SW+ ++
Sbjct: 339 KQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGY 398
Query: 233 --SMNREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + + + +F++M ++D C F ++ + V++G+ +H I+ +
Sbjct: 399 CQNGDFKSVIQIFRKMEKVDLYC-----FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRD 453
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + L+ +YA+ ++ ++ +FD++ R +I+WN++I G+AQNG A++ F ++K
Sbjct: 454 VIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVK 513
Query: 350 ES-KPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
E KP+ +F +L A G ++ + IKVG++ S ++D+ G+
Sbjct: 514 EGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHY----SCMVDLLGRA 569
Query: 406 GSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
G + E++ + + + + + W A++ A +YE
Sbjct: 570 GLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYE 605
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 162/307 (52%), Gaps = 16/307 (5%)
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
A+ L K + + V + L+ + G IH IK+ + V N L+T
Sbjct: 102 ALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 161
Query: 299 MYARFES-MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
+Y + + ++ KVFD L +++ISW ++ISGY + G + +++ F+ ++ +PNA+
Sbjct: 162 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 221
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
T +V+ A D LK G+ H ++ G DS+ ++ SAL+DM+G+ ++ +++++F+
Sbjct: 222 TLSAVIKACSELGD--LKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFD 279
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCGRNGMIH 475
E E WT+IISAL R+ ++ + F M+ + G+ PD TF +VLT CG G +
Sbjct: 280 ELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLK 339
Query: 476 KGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G+ + ++ + +E S +VDM G+ G + E++ + ++P +S
Sbjct: 340 QGKEVHAKVITTGFCGNVVVESS------LVDMYGKCGSVGESQRIFDRMPIKNSVSWSA 393
Query: 531 SLLGACR 537
L G C+
Sbjct: 394 LLGGYCQ 400
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 202/626 (32%), Positives = 338/626 (53%), Gaps = 31/626 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD-----------ALSFALRMNLI 51
+Y G + A +F+ + D+VSWNT++ + D L ++ NL+
Sbjct: 54 LYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLV 113
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
V+ + S AL D E ++H VK GLDS+V NAL+ Y + G +
Sbjct: 114 SVI-SLLPISAALE---DEE---MTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKAL 166
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+VF+E K+ VSWN+I++G G +A+ A M+ G + + V+ +S
Sbjct: 167 WQVFNETVEKNEVSWNSIINGLACKGRCW-DALNAFRMMIDAGAQPNSVTISSILPVLVE 225
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+ + GK+IHG S++MG T + + N L+ Y+K + +A+ +F + RN++SW M
Sbjct: 226 LECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAM 285
Query: 232 IS---MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I+ +NR +A+ +M+ G CPN VTF ++ A + + G+ IH + ++
Sbjct: 286 IANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGL 345
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S+ V N LI MYA+ + + VF+ S ++ +S+N LI GY++ L ++ F
Sbjct: 346 TSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSE 404
Query: 347 V-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ + KP+ +F V++A A +LK G+ H ++ L S V ++LLD Y K
Sbjct: 405 MRLLGKKPDVVSFVGVISA--CANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKC 462
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G I + R+FN+ K +W +I G+ E+ ++ F+ M + V+ D +++++VL
Sbjct: 463 GRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVL 522
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ +G F ML +EP+ HY+CMVD+LGR G +EEA +L+ Q+P P
Sbjct: 523 SACSHGGLVERGWQYFSEMLAQ-RLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPD 581
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
++ +LLGACRI+GNVE+G R A+ L +++P G Y+L+SN+YAE G W+ +R+
Sbjct: 582 ANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIREL 641
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGF 611
MKS+G +K G SW + D +H F
Sbjct: 642 MKSRGAKKNPGCSWVQI--YDQVHAF 665
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/476 (31%), Positives = 246/476 (51%), Gaps = 12/476 (2%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
GV D T+ L C D G+++H ++ K G D++VYVGN L+ +Y G L +A
Sbjct: 5 GVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDA 64
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
RR+FDEMP +D VSWN I+ + +GDY ++R ++ + VS S
Sbjct: 65 RRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAA 124
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
++ E+ ++IH S+K+G + V+ N L+ Y KC +VF ++N +SW ++
Sbjct: 125 LEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSI 184
Query: 232 IS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I+ DA++ F+ M G PN VT ++ + K G+ IHG ++
Sbjct: 185 INGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGT 244
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
++ + N LI MYA+ ++ +F L R I+SWNA+I+ YA N L L A++ F
Sbjct: 245 ETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIR-FVI 303
Query: 347 VIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
++E+ PNA TF +VL A A L G+ H+ +++GL SD V ++L+DMY K
Sbjct: 304 QMQETGECPNAVTFTNVLPA--CARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAK 361
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + ++ VFN T K E ++ +I + D +N F EM G +PD ++F+ V
Sbjct: 362 CGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGV 420
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
++ C + +G+ + L++ H+ + ++D + GR++ A L QI
Sbjct: 421 ISACANLAALKQGKEVHGVALRN-HLYSHLFVSNSLLDFYTKCGRIDIACRLFNQI 475
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 146/576 (25%), Positives = 276/576 (47%), Gaps = 69/576 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNL-IGVVFD 56
++ Y K G +FN + VSWN++++G + DAL+ A RM + G +
Sbjct: 154 VDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALN-AFRMMIDAGAQPN 212
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+VT S+ L ++ E F G ++H ++ G ++++++ N+LI MY++ G EA +F
Sbjct: 213 SVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFH 272
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ ++ VSWNA+++ Y + +EAI +I+M G + V+FT+ AC L
Sbjct: 273 NLDRRNIVSWNAMIANYALN-RLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLG 331
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
GK+IH + +++G + + V N L+ Y+KC A VF V +I +
Sbjct: 332 PGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEVSYNILIIGYSE 391
Query: 237 ED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
D +++LF EMRL G P+ V+F+G+I A + +K+G+ +HG+ ++ + S V
Sbjct: 392 TDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFV 451
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ Y + + + ++F+++ +++ SWN +I GY G A+ F + ++
Sbjct: 452 SNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTV 511
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ + ++ +VL+A HG GL +RG + S
Sbjct: 512 QYDLVSYIAVLSAC--------SHG----------GL--------------VERGWQYFS 539
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ + + E +E +T ++ L R G E +++ + PD+ + ++L C
Sbjct: 540 E-MLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLP---IAPDANIWGALLGACRIY 595
Query: 472 GMIHKGR----HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG----- 522
G + GR HLF+ LK H +Y + ++ GR +EA ++ +
Sbjct: 596 GNVELGRRAAEHLFE--LKPQHC----GYYILLSNIYAETGRWDEANKIRELMKSRGAKK 649
Query: 523 GPGLSVLQ------SLLGACRIHGNVEMGERIADAL 552
PG S +Q + + R+ G E+G+ +A+++
Sbjct: 650 NPGCSWVQIYDQVHAFVAEERVEG-FELGDWLAESV 684
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 191/376 (50%), Gaps = 14/376 (3%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M+R+G++LD +F C ++ G ++HGV K+G+ T V VGN L+ Y C
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 210 TGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVC-PNDVTFIGLIH 263
DA ++F M +R+V+SW T+I + + +A + + M L V PN V+ I L+
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
+ + R IH +K S+ + CN L+ Y + S++ +VF+E + +S
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
WN++I+G A G A+ AF +I ++PN+ T S+L + E K G+ H
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELE--CFKAGKEIHGF 238
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
+++G ++D + ++L+DMY K G E+ +F+ ++ +W A+I+ A +
Sbjct: 239 SMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEA 298
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCM 500
+ +M+ G P+++TF +VL C R G + G+ + ++ I + D + + +
Sbjct: 299 IRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVR---IGLTSDLFVSNSL 355
Query: 501 VDMLGRVGRLEEAEEL 516
+DM + G L A +
Sbjct: 356 IDMYAKCGCLHSARNV 371
>gi|147799187|emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
Length = 542
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/517 (34%), Positives = 289/517 (55%), Gaps = 16/517 (3%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLE 176
MP KD++SWN+ +SG +GD + ++ G+ + D + T+ +AC +
Sbjct: 1 MPMKDTISWNSRISGLLGNGDIEM-GFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCY 59
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
+ K IH + GY ++VGN L+++Y +C +VF M ++NV++WT +IS
Sbjct: 60 VSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLS 119
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E+++ LF +MR V PN +T++ + A S ++EGR IHGL K +
Sbjct: 120 QGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLC 179
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ + L+ MY++ S++D+ K+F+ + +S ++ G AQNG ++Q F ++K
Sbjct: 180 IESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNG 239
Query: 352 ---KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
PN + ++L G D SL G++ HS IIK S+ V + L++MY K G +
Sbjct: 240 VVIDPNMIS--AILGVFGI--DTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDL 295
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+S ++F +++ +W ++I+A ARHG+ + ++EM +GV P +TFLS+L C
Sbjct: 296 DDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHAC 355
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ KG +SM KDY I P +HY+C+VDM+GR G L EA++ + ++P PG+ V
Sbjct: 356 AHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILV 415
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
Q+LLGAC IHGN EMG+ A+ L P Y+L++N+Y+ +G W+ A K MK
Sbjct: 416 WQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGKWKERARTIKKMKD 475
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
GV KE G SW ++ +H F D HP +E IY
Sbjct: 476 MGVTKETGISWIEIE--KQIHSFVVEDRMHPHAEIIY 510
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 217/432 (50%), Gaps = 21/432 (4%)
Query: 24 DIVSWNTVLSGFEKSDD-ALSFALRMNLI--GVV-FDAVTYSTALSFCLDHEGFLFGLQL 79
D +SWN+ +SG + D + F + L G+ FD T +T L+ C E +
Sbjct: 5 DTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYVSKMI 64
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
HSL+ +G + E+ VGNALIT Y R G RRVFDEM K+ V+W A++SG +Q Y
Sbjct: 65 HSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFY 124
Query: 140 GVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
E L L MR G + + +++ S+ AC + + G+QIHG+ K+G + + +
Sbjct: 125 --EESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIES 182
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM---ISMN--REDAVSLFKEMRLDGVCP 253
LM YSKC DA K+F + + +S T + ++ N E+++ +F +M +GV
Sbjct: 183 ALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVI 242
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+ ++ I + G+ IH L IK +F S V N LI MY++ + DS K+F
Sbjct: 243 DPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIF 302
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNA---VGAAE 369
+ R +SWN++I+ +A++G A+Q + + E P TF S+L+A VG E
Sbjct: 303 CWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVE 362
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWTA 428
K S G+ + ++DM G+ G + E+++ EK W A
Sbjct: 363 ----KGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQA 418
Query: 429 IISALARHGDYE 440
++ A + HG+ E
Sbjct: 419 LLGACSIHGNSE 430
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 189/363 (52%), Gaps = 20/363 (5%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYS 61
C SG+ +F+ ++ ++V+W V+SG + +++L +M V +++TY
Sbjct: 93 CSSGRR-----VFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYL 147
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
++L C + G Q+H L+ K G+ ++ + +AL+ MYS+ G L +A ++F+
Sbjct: 148 SSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEV 207
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
D VS IL G Q+G + E+I ++M++ G+ +D ++ G + +L LGKQI
Sbjct: 208 DEVSMTVILVGLAQNG-FEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQI 266
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NR 236
H + IK +G++ V N L++ YSKC D+ K+F M RN +SW +MI+ N
Sbjct: 267 HSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNG 326
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR-MIHGLCIKTNFLSEPSVCNC 295
A+ L++EMRL+GV P DVTF+ L+HA + LV++G + + C
Sbjct: 327 SRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYAC 386
Query: 296 LITMYARFESMQDSEKVFDELSCRE-IISWNALISGYAQNGLS----LAAVQAFFGVIKE 350
++ M R + +++K + L + I+ W AL+ + +G S AA Q F +
Sbjct: 387 VVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPES 446
Query: 351 SKP 353
P
Sbjct: 447 PAP 449
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 115/237 (48%), Gaps = 6/237 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M+MY K G + A IF + D VS +L G ++ ++++ ++M GVV D
Sbjct: 185 MDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDP 244
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S L G Q+HSLI+K S +V N LI MYS+ G L ++ ++F
Sbjct: 245 NMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCW 304
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++SVSWN++++ + + G+ G A+ EM +G+ V+F S AC H +E
Sbjct: 305 MPQRNSVSWNSMIAAFARHGN-GSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEK 363
Query: 178 GKQ-IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMI 232
G + ++ G G + ++ + + +A K R+ ++ ++ W ++
Sbjct: 364 GMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALL 420
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+NMY K G D ++ IF + + VSWN++++ F + + AL M L GV
Sbjct: 286 INMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTD 345
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
VT+ + L C L +G F L S+ +G+ + ++ M R G L EA++
Sbjct: 346 VTFLSLLHACAHVGLVEKGMGF---LESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKK 402
Query: 114 VFDEMPNKDSV-SWNAILSGYTQDGD 138
+ +P K + W A+L + G+
Sbjct: 403 FIERLPEKPGILVWQALLGACSIHGN 428
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 198/580 (34%), Positives = 314/580 (54%), Gaps = 21/580 (3%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH+L V G ++ +V +AL +Y R+ AR+VFD +P+ D+V WN +L+G +
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS---- 191
Query: 139 YGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
G EA+ + M+ G +R D + S A ++ +G+ +H + K G H V
Sbjct: 192 -GSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVL 250
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVC 252
L+S YSKC A +F M +++++ +IS + +V+LF E+ G+
Sbjct: 251 TGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLW 310
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
PN T + LI S + +HG +K+ F + V + T++ R M+ + K
Sbjct: 311 PNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKA 370
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDI 371
FD + + + SWNA+ISGYAQNGL+ AV F ++K +PN T S L+A +
Sbjct: 371 FDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGAL 430
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SL G+ H I + L+ + V +AL+DMY K GSI E++R+FN K+ +W A+I+
Sbjct: 431 SL--GKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIA 488
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
HG + +K+M + + P S TFLSVL C G++ +G +F SM DY I
Sbjct: 489 GYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAIN 548
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPG---GPGLSVLQSLLGACRIHGNVEMGERI 548
P +H +CMVD+LGR G+L+EA EL+ + P GPG V +LLGAC +H + ++ +
Sbjct: 549 PGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPG--VWGALLGACMVHKDSDLAKLA 606
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL 608
+ L +++P SG YVL+SNL+ K + A++R+ KS+ + K G++ ++G+
Sbjct: 607 SQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKP-- 664
Query: 609 HGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
H F +GD HP+SE IY E L ++M + E AL
Sbjct: 665 HVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAAL 704
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 216/452 (47%), Gaps = 24/452 (5%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVV-FDAVTY 60
+Y + D A +F+ + +PD V WNT+L+G S+ SFA RM G V DA T
Sbjct: 157 KLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFA-RMVCDGSVRPDATTL 215
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
++ L + G +HS K GL +V LI++YS+ G + AR +FD M
Sbjct: 216 ASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEK 275
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH---VSFTSAASACGHEKNLEL 177
D V++NA++SGY+ +G G L E+M GL + V+ S GH+ L
Sbjct: 276 PDLVAYNALISGYSVNGMVGSSVNL-FTELMTLGLWPNSSTLVALIPVHSPFGHDL---L 331
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
+ +HG +K G+ + V + + + + A K F M ++ + SW MIS +
Sbjct: 332 AQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQ 391
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ AV+LF++M V PN +T + A + + G+ +H + + + V
Sbjct: 392 NGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYV 451
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
LI MYA+ S+ ++ ++F+ + + ++SWNA+I+GY +G A++ + ++
Sbjct: 452 MTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHL 511
Query: 352 KPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
P + TF SVL A G E+ + I G++ + ++D+ G+ G +
Sbjct: 512 LPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEH----CTCMVDLLGRAGQL 567
Query: 409 FESQRVFNETQEKS--EFAWTAIISALARHGD 438
E+ + +E + + W A++ A H D
Sbjct: 568 KEAFELISEFPKSAVGPGVWGALLGACMVHKD 599
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 185/370 (50%), Gaps = 25/370 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K G + A C+F+ + PD+V++N ++SG+ + +++ + +G+ ++
Sbjct: 254 ISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNS 313
Query: 58 VTYSTALSFCLDHEGF---LFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
ST ++ H F L LH ++K G + V A+ T++ R + AR+
Sbjct: 314 ---STLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKA 370
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEK 173
FD MP K SWNA++SGY Q+G E +AL E M K +R + ++ +S SAC
Sbjct: 371 FDTMPEKTMESWNAMISGYAQNG--LTEMAVALFEQMVKLNVRPNPITISSTLSACAQLG 428
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L LGK +H + + +V V L+ Y+KC +A ++F M ++NV+SW MI+
Sbjct: 429 ALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIA 488
Query: 234 -----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+A+ L+K+M + P TF+ +++A S G LV+EG + + ++
Sbjct: 489 GYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFR-SMTDDYAI 547
Query: 289 EPSV--CNCLITMYARFESMQDSEKVFDELSCREIIS--WNALISG---YAQNGLSLAAV 341
P + C C++ + R ++++ ++ E + W AL+ + + L+ A
Sbjct: 548 NPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLAS 607
Query: 342 QAFFGVIKES 351
Q F + E+
Sbjct: 608 QKLFELDPEN 617
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G +A IFN ++N ++VSWN +++G+ + +AL M ++ +
Sbjct: 456 IDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTS 515
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
T+ + L C L EG+ S+ + ++ + ++ + R G+L EA
Sbjct: 516 ATFLSVLYACSHGGLVEEGWKV---FRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFE 572
Query: 114 VFDEMPNKDSVS---WNAILSG--YTQDGDYGVEAILALIEM---------MRKGLRLDH 159
+ E P K +V W A+L +D D A L E+ + L
Sbjct: 573 LISEFP-KSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSK 631
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
++ AA K+ +L K I++G HV
Sbjct: 632 KQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHV 666
>gi|115467784|ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa Japonica Group]
gi|125597005|gb|EAZ36785.1| hypothetical protein OsJ_21122 [Oryza sativa Japonica Group]
Length = 992
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 196/608 (32%), Positives = 331/608 (54%), Gaps = 17/608 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G D A+ +F+++ + WN+++SG+ K + + RM + GV DA
Sbjct: 386 VSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDA 445
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T + +S C E G +H+ V+ L+ V NAL+ MY+ G+L ++F
Sbjct: 446 LTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHT 505
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + +SWN I+SG+ ++GD V + +M ++ D V+ + S+ +++ +
Sbjct: 506 MEVRTLISWNTIISGFAENGD-SVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITV 564
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR- 236
G+ +H ++I+ G VSV N L++ Y+ C + K+F + N IS+ +++ R
Sbjct: 565 GESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRK 624
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E+ + LF M + PN +T + L+ I + +G+ +H I+ E S+
Sbjct: 625 NNLFEEILPLFYHMIKNDQKPNIITLLNLL---PICHSQLQGKTVHSYAIRNFSKLETSL 681
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
I MY+RF +++ +F + R I WNA++S Q + A F +
Sbjct: 682 FTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNV 741
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI-IKVGLDSDPIVGSALLDMYGKRGSIFE 410
K +A T +L + A + C + I ++ G D IV +AL+DM+ + GSI
Sbjct: 742 KTDAVT---MLALISACSQLGKADLAECVTAIALQKGFDGTIIVLNALIDMHSRCGSISF 798
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++++F+ + EK +W+ +I+A + HGD S ++ F M + G++PD ITF+SVL+ C R
Sbjct: 799 ARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSSGIKPDDITFVSVLSACSR 858
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G + +GR LF SML D+ I P +HY+CMVD+LGR G L+EA ++V +P P S+L+
Sbjct: 859 SGFLEQGRTLFRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLE 918
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLLGACR HGN ++GE + L + + SYV++SN+YA G W LR M++KG
Sbjct: 919 SLLGACRFHGNSKLGESVGKILTESDHGNPRSYVMLSNIYASAGKWSDYERLRSDMEAKG 978
Query: 591 VRKEVGFS 598
+ K+VG S
Sbjct: 979 LIKDVGVS 986
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 246/484 (50%), Gaps = 21/484 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS------GFEKSDDALSFALRMNLIGVV 54
++MY G +L +F+ ++VS N+++S +EK+ M G+V
Sbjct: 285 ISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRL---MRCKGLV 341
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ VT + L C + G G +H +++KFGL +V V +AL++MYS+ G L A +
Sbjct: 342 PNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFL 401
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F + K + WN+++SGY + + + + ++ M +G+ D ++ S S C H ++
Sbjct: 402 FSSVTEKSQLLWNSLISGYLVNNKWNM-VMGSVRRMQIEGVDPDALTVISVISKCRHTED 460
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L +GK IH +++ + SV N L++ Y+ C K+F M R +ISW T+IS
Sbjct: 461 LHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISG 520
Query: 235 NREDAVSL-----FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
E+ S+ F +MRL + + VT I LI ++S + G +H L I++ +
Sbjct: 521 FAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLD 580
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N LITMY +Q EK+FD LS IS+NAL++GY +N L + F+ +IK
Sbjct: 581 VSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPLFYHMIK 640
Query: 350 -ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ KPN T ++L S G+ HS+ I+ + + ++ + MY + ++
Sbjct: 641 NDQKPNIITLLNLLPICH-----SQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNL 695
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+F E++ W AI+SA + + F++++ V+ D++T L++++ C
Sbjct: 696 EYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISAC 755
Query: 469 GRNG 472
+ G
Sbjct: 756 SQLG 759
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 245/478 (51%), Gaps = 14/478 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFA---LRMNLIGVVFDA 57
++MY KSGQ D + +F+ + + D++SWN ++SG+ + L A +M G +A
Sbjct: 184 LDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNA 243
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ +S G LH+ +K G+ + + A I+MY+ +G L + +F +
Sbjct: 244 SSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQ 303
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
+ VS N+++S Q G + E + +MR KGL + V+ S C + +
Sbjct: 304 SLVDNLVSCNSMISVCMQHGAW--EKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGIN 361
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+ +HG+ IK G VSV + L+S YSK A +F + +++ + W ++IS
Sbjct: 362 HGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYL 421
Query: 234 -MNREDAV-SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N+ + V + M+++GV P+ +T I +I + G+ IH +++ S
Sbjct: 422 VNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNES 481
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
V N L+ MYA + K+F + R +ISWN +ISG+A+NG S+A ++ F + + +
Sbjct: 482 VMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLAD 541
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + T ++++++ A EDI++ G+ HS I+ G + D V +AL+ MY G I
Sbjct: 542 MQFDLVTLIALISSLSAIEDITV--GESVHSLAIRSGCNLDVSVANALITMYTNCGIIQA 599
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+++F+ + ++ A+++ ++ +E ++ F M +P+ IT L++L +C
Sbjct: 600 GEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPLFYHMIKNDQKPNIITLLNLLPIC 657
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 210/419 (50%), Gaps = 13/419 (3%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T+ + C G ++H +V+ G V V AL+ MY++ G++ +RRVF
Sbjct: 141 DNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVF 200
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D M ++D +SWNA++SGY+ +G +EA AL +M + G R + S S
Sbjct: 201 DGMKSRDLISWNAMISGYSLNGCL-LEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVR 259
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+ G +H ++K G S+ +S Y+ + +F + N++S +MIS+
Sbjct: 260 DAGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVC 319
Query: 236 R-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E A +F+ MR G+ PN VT + ++ S + G +HG+ IK +
Sbjct: 320 MQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQV 379
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN---GLSLAAVQAFFGV 347
SV + L++MY++ + + +F ++ + + WN+LISGY N + + +V+
Sbjct: 380 SVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRM--Q 437
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
I+ P+A T SV++ ED+ + G+ H++ ++ L+ + V +ALL MY G
Sbjct: 438 IEGVDPDALTVISVISKCRHTEDLHV--GKSIHAYAVRSRLELNESVMNALLAMYADCGQ 495
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ ++F+ + ++ +W IIS A +GD + + F +M ++ D +T +++++
Sbjct: 496 LSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALIS 554
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 165/333 (49%), Gaps = 16/333 (4%)
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
D+ +F AC L LGK++H ++ G+G +V V L+ Y+K + +VF
Sbjct: 141 DNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVF 200
Query: 218 RRMHDRNVISWTTMIS---MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
M R++ISW MIS +N +A K+M+ DG PN + +G++ +S +
Sbjct: 201 DGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRD 260
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G +H +K+ L + S+ I+MYA F + S +F + ++S N++IS
Sbjct: 261 AGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCM 320
Query: 333 QNGLSLAAVQAFFGVIKESK-----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
Q+G A + FGV + + PN T S+L + + HG+ H +IK G
Sbjct: 321 QHG----AWEKAFGVFRLMRCKGLVPNLVTVVSILPC--CSNFFGINHGESVHGMVIKFG 374
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
L V SAL+ MY K G + + +F+ EKS+ W ++IS + + VM +
Sbjct: 375 LAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVR 434
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
M+ +GV PD++T +SV++ C +H G+ +
Sbjct: 435 RMQIEGVDPDALTVISVISKCRHTEDLHVGKSI 467
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 142/286 (49%), Gaps = 8/286 (2%)
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
+ + L++E+ G ++ TF +I A + + ++ G+ +H ++T V L
Sbjct: 126 RELLGLYREVCAFG--SDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTAL 183
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
+ MYA+ + S +VFD + R++ISWNA+ISGY+ NG L A +A + ++ +PNA
Sbjct: 184 LDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNA 243
Query: 356 YTFGSVLNAVGAAEDISLKH-GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
S++ V + ++ G H+ +K G+ D + A + MY G + S +
Sbjct: 244 ---SSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSL 300
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F+++ + + ++IS +HG +E F+ M KG+ P+ +T +S+L C I
Sbjct: 301 FHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGI 360
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ G + ++K + + S +V M ++G L+ A L +
Sbjct: 361 NHGESVHGMVIK-FGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSV 405
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+TF V+ A A L+ G+ H +++ G + V +ALLDMY K G + S+RVF
Sbjct: 143 FTFPPVIRACAAVS--CLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVF 200
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ + + +W A+IS + +G K+M+ G RP++ + + ++++ G+
Sbjct: 201 DGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRD 260
Query: 476 KGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G L LK D + P+ + M G L + L Q L
Sbjct: 261 AGDPLHAFALKSGVLGDESLTPA------FISMYAAFGHLSSSLSLFHQ-SLVDNLVSCN 313
Query: 531 SLLGACRIHGNVE 543
S++ C HG E
Sbjct: 314 SMISVCMQHGAWE 326
>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 206/607 (33%), Positives = 329/607 (54%), Gaps = 46/607 (7%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTAL 64
CK GQ +A+ I N+ ++ +I + + Y++ L
Sbjct: 37 CKLGQLTEAIRILNSTHSSEIPATPKL----------------------------YASLL 68
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR-LVEARRVFDEMPNKDS 123
C F+ G+Q H+ +VK GL+++ VGN+L+++Y + G + E RRVFD KD+
Sbjct: 69 QTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDA 128
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
+SW +++SGY ++ V+A+ +EM+ GL + + +SA AC + LG+ HG
Sbjct: 129 ISWTSMMSGYVTGKEH-VKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHG 187
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----ED 238
V I G+ + + + L Y DA +VF M + +VI WT ++S E+
Sbjct: 188 VVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEE 247
Query: 239 AVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLSEPSVCNC 295
A+ LF M R G+ P+ TF ++ A GNL +K+G+ IHG I S V +
Sbjct: 248 ALGLFYAMHRGKGLVPDGSTFGTVLTAC--GNLRRLKQGKEIHGKLITNGIGSNVVVESS 305
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNA 355
L+ MY + S++++ +VF+ +S + +SW+AL+ GY QNG A++ F + + +
Sbjct: 306 LLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFR---EMEEKDL 362
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
Y FG+VL A + L G+ H ++ G + IV SAL+D+YGK G I + RV+
Sbjct: 363 YCFGTVLKACAGLAAVRL--GKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY 420
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
++ ++ W A++SALA++G E ++ F +M KG++PD I+F+++LT CG GM+
Sbjct: 421 SKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD 480
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
+GR+ F M K Y I+P +HYSCM+D+LGR G EEAE L+ + S+ LLG
Sbjct: 481 EGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGP 540
Query: 536 CRIHGNV-EMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
C + + + ERIA +M++EP SYVL+SN+Y G +RK M +GV K
Sbjct: 541 CAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKT 600
Query: 595 VGFSWAD 601
VG SW D
Sbjct: 601 VGQSWID 607
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G +A +FN ++ + VSW+ +L G+ ++ + A+ M D
Sbjct: 307 LDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDL 362
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ T L C G ++H V+ G V V +ALI +Y + G + A RV+ +
Sbjct: 363 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSK 422
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++ ++WNA+LS Q+G G EA+ +M++KG++ D++SF + +ACGH ++
Sbjct: 423 MSIRNMITWNAMLSALAQNGR-GEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDE 481
Query: 178 GKQ 180
G+
Sbjct: 482 GRN 484
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/611 (30%), Positives = 321/611 (52%), Gaps = 22/611 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++ Y G AL +F+ + ++VSWN+++ F + D +F + D T
Sbjct: 229 VSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDDGAF---------MPDVATV 279
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
T L C G +H VK LD E+ V NAL+ MYS+WG +++++ +F N
Sbjct: 280 VTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNN 339
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG---LRLDHVSFTSAASACGHEKNLEL 177
K+ VSWN ++ G++ +GD + L+ M G ++ D V+ +A C E L
Sbjct: 340 KNVVSWNTMVGGFSAEGD--IHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPS 397
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
K++H S+K + + N +++Y+KC A +VF + + + SW +I
Sbjct: 398 LKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQ 457
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S + ++ +M+ G+ P++ T L+ A S ++ G+ +HG I+ + V
Sbjct: 458 SSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 517
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKES 351
++++Y + + +FD + ++SWN +I+G+ QNG A+ F V+
Sbjct: 518 YLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGI 577
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P + +V A SL+ G+ H++ +K L+ + + +++DMY K G+I +S
Sbjct: 578 QPCGISMMTVFGACSLLP--SLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQS 635
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+VFN +EKS +W A+I HG + + F+EM+ G PD +TFL VLT C +
Sbjct: 636 SKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHS 695
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++H+G D M + ++P+ HY+C++DMLGR G+L+ A + ++ P + + S
Sbjct: 696 GLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNS 755
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL CRIH N+EMGE++A L +EP +YVL+SNLYA G W+ V +R+ MK +
Sbjct: 756 LLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSL 815
Query: 592 RKEVGFSWADV 602
RK+ G SW ++
Sbjct: 816 RKDAGCSWIEL 826
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/530 (24%), Positives = 259/530 (48%), Gaps = 32/530 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRM-NLIGVVFD 56
+ MY G D + F+ L + ++ WN V+S + +++ + L ++M + ++ D
Sbjct: 127 ITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPD 186
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ + C GL +H L+VK GL +++VGNAL++ Y G + +A ++FD
Sbjct: 187 NFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFD 246
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP ++ VSWN+++ ++ +GD G D + + C E+ +
Sbjct: 247 IMPERNLVSWNSMIRVFSDNGDDG-------------AFMPDVATVVTVLPVCAREREIG 293
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
+GK +HG ++K+ + V N LM YSK D+ +F+ +++NV+SW TM+
Sbjct: 294 VGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFS 353
Query: 233 -SMNREDAVSLFKEMRL--DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ L ++M + V ++VT + + +++ + +H +K F+ +
Sbjct: 354 AEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYD 413
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ N + YA+ S+ +++VF + + + SWNALI GYAQ+ ++ A +K
Sbjct: 414 ELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQ-MK 472
Query: 350 ESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
S P+ +T S+L+A + SL+ G+ H II+ L+ D V ++L +Y G
Sbjct: 473 NSGLLPDNFTVCSLLSACSKLK--SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 530
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ Q +F+ ++ S +W +I+ ++G E + F++M G++P I+ ++V
Sbjct: 531 LCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGA 590
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC-MVDMLGRVGRLEEAEEL 516
C + GR LK H+ +C ++DM + G + ++ ++
Sbjct: 591 CSLLPSLRLGREAHAYALK--HLLEDNAFIACSIIDMYAKNGAITQSSKV 638
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 230/489 (47%), Gaps = 35/489 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTA 63
+C++G DK+ + D E S D F L +G++ A
Sbjct: 53 FCETGDLDKSFRVVQEFAGDD-----------ESSSDV--FLLVREALGLLLQASGKRKD 99
Query: 64 LSFCLDHEGFLFGLQLHSLIV-KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
+ G ++H L+ L S+ + +ITMY+ G ++R FD + +K+
Sbjct: 100 IEM---------GRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKN 150
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQI 181
WNA++S Y+++ Y E + I+M+ K L D+ +F AC ++ +G +
Sbjct: 151 LFQWNAVISSYSRNELYH-EVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS 241
HG+ +K G + VGN L+S Y DA K+F M +RN++SW +MI
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMI--------R 261
Query: 242 LFKEMRLDGV-CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
+F + DG P+ T + ++ + + G+ +HG +K + E V N L+ MY
Sbjct: 262 VFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMY 321
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
+++ + DS+ +F + + ++SWN ++ G++ G ++ S+ +
Sbjct: 322 SKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVT 381
Query: 361 VLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
+LNAV D S L + H + +K D ++ +A + Y K GS+ +QRVF+ +
Sbjct: 382 ILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIR 441
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
K+ +W A+I A+ D ++ +M+N G+ PD+ T S+L+ C + + G+
Sbjct: 442 SKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKE 501
Query: 480 LFDSMLKDY 488
+ +++++
Sbjct: 502 VHGFIIRNW 510
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 203/673 (30%), Positives = 350/673 (52%), Gaps = 45/673 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K + D++ +F + + +SW+ +++G ++ D L M +GV
Sbjct: 223 LDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQ 282
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y++ L C G QLH+ +K + V A + MY++ + +A+R+FD
Sbjct: 283 SIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDM 342
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
N + S+NA+++GY+Q D G A+L ++ + L D +S + A AC K L
Sbjct: 343 SENLNLQSYNAMITGYSQK-DNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSE 401
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
G Q+HG++ K + ++ V N + Y KCE +A +VF M ++ +SW +I+ +
Sbjct: 402 GLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQ 461
Query: 236 ---REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
R +++ M G+ P++ TF ++ A + G+ + G IH +K S P +
Sbjct: 462 NEERSKTLNILVSMLRSGMEPDEYTFGSVLKACA-GDSLNHGMEIHTTIVKLGMASNPYI 520
Query: 293 CNCLITMYARFESMQDSEKVFDEL---------------SCRE------------IISWN 325
+ L+ MY++ + ++EK+ +++ + E I+SWN
Sbjct: 521 GSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWN 580
Query: 326 ALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
A+ISGY S A Q FF + E P+ +T+ +VL+ I L G++ H+H+
Sbjct: 581 AIISGYVMRKQSEDA-QRFFNRMMEMGITPDKFTYSTVLDTCANLASIGL--GKQIHAHV 637
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
IK L D + S L+DMY K G++ +S+ +F + + W A+I A HG E +
Sbjct: 638 IKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAI 697
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
F+ M + P+ TF+S+L C G++ +G F M K+Y ++P +HYS MVD+
Sbjct: 698 KLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDI 757
Query: 504 LGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIH-GNVEMGERIADALMKMEPAGSGS 562
LG+ G +E+A EL+ ++P + ++LL AC+I+ NVE E A+AL++++P S +
Sbjct: 758 LGKSGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSST 817
Query: 563 YVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSE 622
Y+L+SN+YA+ G W+ + LR M+S ++KE G SW ++ D H F GD HPR +
Sbjct: 818 YILLSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVEIR--DEFHTFLVGDKAHPRWK 875
Query: 623 EIYRMAECLGSEM 635
EIY + +EM
Sbjct: 876 EIYNGLALIYNEM 888
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 164/558 (29%), Positives = 277/558 (49%), Gaps = 49/558 (8%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFA---LRMNLIGVVFDAVTY 60
Y S +A F + D+VSWN++LSGF ++ + L + M GV FD ++
Sbjct: 125 YAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSF 184
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S L C E + G Q+H + ++ G D++V G+AL+ MY++ RL E+ VF MP
Sbjct: 185 SVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQ 244
Query: 121 KDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K+ +SW+AI++G Q+ D G++ EM + G+ + + S +C +L LG
Sbjct: 245 KNWISWSAIIAGCVQNNFLDGGLK---MFKEMQKVGVGVSQSIYASVLKSCATLPDLRLG 301
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNRE 237
Q+H ++K + V + Y+KC DA ++F + N+ S+ MI+ +++
Sbjct: 302 TQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQK 361
Query: 238 D----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
D A+ LF+++ + ++++ G + A + + EG +HGL K+NF V
Sbjct: 362 DNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVA 421
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N I MY + E++ ++ +VFDE+ ++ +SWNA+I+ + QN + +++ +
Sbjct: 422 NAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGME 481
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ YTFGSVL A SL HG H+ I+K+G+ S+P +GS+L+DMY K G I E++
Sbjct: 482 PDEYTFGSVLKACAGD---SLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAE 538
Query: 413 RVFN----------------ETQEKSE-----------FAWTAIISALARHGDYESVMNQ 445
++ N ET E+ + +W AIIS E
Sbjct: 539 KIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRF 598
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDM 503
F M G+ PD T+ +VL C I G+ + ++K E D Y C +VDM
Sbjct: 599 FNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKK---ELQYDVYICSTLVDM 655
Query: 504 LGRVGRLEEAEELVGQIP 521
+ G L ++ + + P
Sbjct: 656 YSKCGNLHDSRLMFEKAP 673
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 246/503 (48%), Gaps = 42/503 (8%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD--- 116
+S C G Q H+ ++ G V+V N L+ +Y G L A ++FD
Sbjct: 52 FSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMP 111
Query: 117 ----------------------------EMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
MP +D VSWN++LSG+ Q G+ +E++ I
Sbjct: 112 LRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGE-NLESVKVFI 170
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
EM R G+ D+ SF+ C +N +LG QIHG++++MGY T V G+ L+ Y+KC+
Sbjct: 171 EMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCK 230
Query: 209 VTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIH 263
++ VF M +N ISW+ +I+ ++ + +FKEM+ GV + + ++
Sbjct: 231 RLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLK 290
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
+ + ++ G +H +K++F+ + V + MYA+ +MQD++++FD + S
Sbjct: 291 SCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQS 350
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
+NA+I+GY+Q A+ F + K S + + L A + +S G + H
Sbjct: 351 YNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLS--EGLQLHGL 408
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
K + V +A +DMYGK ++ E+ RVF+E K +W AII+A ++ +
Sbjct: 409 ATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKT 468
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
+N M G+ PD TF SVL C + + H G + +++K + +P S +VD
Sbjct: 469 LNILVSMLRSGMEPDEYTFGSVLKACAGDSLNH-GMEIHTTIVK-LGMASNPYIGSSLVD 526
Query: 503 MLGRVGRLEEAEELVGQIPGGPG 525
M + G ++EAE++ +I G G
Sbjct: 527 MYSKCGMIDEAEKIHNKIFIGIG 549
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 172/390 (44%), Gaps = 40/390 (10%)
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+F+ C ++ ELGKQ H I G+ V V N L+ Y C G A K+F M
Sbjct: 51 NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGM 110
Query: 221 HDRNVISWTTMI-----------------SMNREDAVS-------------------LFK 244
R+V+SW MI M D VS +F
Sbjct: 111 PLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFI 170
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
EM GV ++ +F ++ SI K G IHG+ ++ + ++ + L+ MYA+ +
Sbjct: 171 EMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCK 230
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYT-FGSVLN 363
+ +S VF + + ISW+A+I+G QN ++ F + K + + + SVL
Sbjct: 231 RLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLK 290
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
+ D+ L G + H+H +K D IV +A LDMY K ++ ++QR+F+ ++ +
Sbjct: 291 SCATLPDLRL--GTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNL 348
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
++ A+I+ ++ + + F+++ + D I+ L C + +G L
Sbjct: 349 QSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGL 408
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
K + + + +DM G+ L+EA
Sbjct: 409 ATKS-NFSRNICVANAFIDMYGKCEALDEA 437
>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
Length = 810
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 198/613 (32%), Positives = 336/613 (54%), Gaps = 31/613 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+NMY K G A+ F + ++VSW T ++GF + D+ +S L + + GV +
Sbjct: 212 VNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINK 271
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++ L C Q+H +++K + + V ALI+ Y+ +G + + +VF+E
Sbjct: 272 YTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEE 331
Query: 118 MPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ S W+A +SG + + ++ L M +GLR + + S S+ ++E
Sbjct: 332 AGTVSNRSIWSAFISGVSNHSL--LRSVQLLRRMFHQGLRPNDKCYASVFSSV---NSIE 386
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G Q+H +IK G+ + VG+ L + YS+C+ D+ KVF M +R+ +SWT M++
Sbjct: 387 FGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFA 446
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK----TNFL 287
+ +A F+ M LDG P+ V+ ++ A + + +G+ +HG ++ T F+
Sbjct: 447 THGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFI 506
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
++ C I+MY++ + +Q + ++FD ++ + W+++ISGYA NG A+ F +
Sbjct: 507 ND-----CFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLM 561
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ S + ++Y S+L+ DI+ + + H + IK G+ SD V S+L+ +Y +
Sbjct: 562 VAASIRIDSYICSSILSLCA---DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRS 618
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G++ +S++VF+E AWT II A+HG ++ + F M GVRPD++ +SVL
Sbjct: 619 GNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVL 678
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C RNG++ +G + F+SM Y +EP HY CMVD+LGR GRL EA+ V +P P
Sbjct: 679 SACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPD 738
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
L V +LL ACR+H + +G R + ++ SGS+ +SN+ A GDWE VA +RK
Sbjct: 739 LMVWSTLLAACRVHDDTVLG-RFVENKIREGNYDSGSFATLSNILANSGDWEEVARIRKT 797
Query: 586 MKSKGVRKEVGFS 598
M KGV KE G+S
Sbjct: 798 M--KGVNKEPGWS 808
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 280/570 (49%), Gaps = 30/570 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG-FEKSDDALSFALRMNLI--GVVFDA 57
+++ KSG+ AL +F + + V WN +SG + L+ + +++ ++
Sbjct: 111 VDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNS 170
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TYS ALS C E G +H L+++ + +V+VG +L+ MY++ G + A R F
Sbjct: 171 FTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWR 230
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ VSW ++G+ QD D V A+L L EM+R G+ ++ + TS AC +
Sbjct: 231 MPVRNVVSWTTAIAGFVQD-DEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVRE 289
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR---MHDRNVISWTTMIS- 233
QIHG+ +K V L+STY+ + KVF + +R++ W+ IS
Sbjct: 290 ASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISG 347
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +V L + M G+ PND + + ++ N ++ G +H IK F+
Sbjct: 348 VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSV---NSIEFGGQLHSSAIKEGFIHGI 404
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + L TMY+R +++QDS KVF+E+ R+ +SW A+++G+A +G S+ A F +I +
Sbjct: 405 LVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILD 464
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+ + ++L+A E L G+ H H ++V + + MY K +
Sbjct: 465 GFKPDHVSLTAILSACNRPE--CLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQ 521
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++R+F+ T K + W+++IS A +G E ++ F+ M +R DS S+L++C
Sbjct: 522 TARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCA 581
Query: 470 RNGMIHKGRHLFDSMLKDYHIEP----SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
R + L Y I+ S +V + R G ++++ ++ +I P
Sbjct: 582 -----DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEI-SVPD 635
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKM 555
L +++ HG+ + + D ++++
Sbjct: 636 LVAWTTIIDGYAQHGSSQNALAMFDLMVQL 665
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 232/453 (51%), Gaps = 20/453 (4%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q++ K GL YV ++ + ++ GRL +A RVF + +V WNA +SG ++G
Sbjct: 90 QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNG 149
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ G+ A+ +M+ + +++ A SAC + L +G+ +HG+ ++ V VG
Sbjct: 150 EGGL-AVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVC 252
L++ Y+KC G A + F RM RNV+SWTT I+ +D A+ L +EM +GV
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
N T ++ A + ++V+E IHG+ +KT + V LI+ Y F ++ SEKV
Sbjct: 269 INKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKV 328
Query: 313 FDE---LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
F+E +S R I W+A ISG + + L L +VQ + + +PN + SV ++V
Sbjct: 329 FEEAGTVSNRSI--WSAFISGVSNHSL-LRSVQLLRRMFHQGLRPNDKCYASVFSSVN-- 383
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
S++ G + HS IK G +VGSAL MY + ++ +S +VF E QE+ +WTA
Sbjct: 384 ---SIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTA 440
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+++ A HG F+ M G +PD ++ ++L+ C R + KG+ + L+ Y
Sbjct: 441 MVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVY 500
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ C + M + ++ A + P
Sbjct: 501 GETTFIN--DCFISMYSKCQGVQTARRIFDATP 531
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 147/319 (46%), Gaps = 13/319 (4%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MN 235
+Q++ + K G + V ++ +K DA +VF + + W +S N
Sbjct: 89 EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148
Query: 236 RED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E AV +F++M PN T+ G + A + G + GR +HGL ++ + + V
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVG 208
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
L+ MYA+ M + + F + R ++SW I+G+ Q+ ++A+ +++
Sbjct: 209 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 268
Query: 354 -NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
N YT S+L + A+ ++ + H ++K + D +V AL+ Y G I S+
Sbjct: 269 INKYTATSIL--LACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSE 326
Query: 413 RVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+VF E S + W+A IS ++ H SV + M ++G+RP+ + SV +
Sbjct: 327 KVFEEAGTVSNRSIWSAFISGVSNHSLLRSV-QLLRRMFHQGLRPNDKCYASVFSSVNS- 384
Query: 472 GMIHKGRHLFDSMLKDYHI 490
I G L S +K+ I
Sbjct: 385 --IEFGGQLHSSAIKEGFI 401
>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
Length = 701
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 198/613 (32%), Positives = 336/613 (54%), Gaps = 31/613 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+NMY K G A+ F + ++VSW T ++GF + D+ +S L + + GV +
Sbjct: 103 VNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINK 162
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++ L C Q+H +++K + + V ALI+ Y+ +G + + +VF+E
Sbjct: 163 YTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEE 222
Query: 118 MPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ S W+A +SG + + ++ L M +GLR + + S S+ ++E
Sbjct: 223 AGTVSNRSIWSAFISGVSNHSL--LRSVQLLRRMFHQGLRPNDKCYASVFSSV---NSIE 277
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G Q+H +IK G+ + VG+ L + YS+C+ D+ KVF M +R+ +SWT M++
Sbjct: 278 FGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFA 337
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK----TNFL 287
+ +A F+ M LDG P+ V+ ++ A + + +G+ +HG ++ T F+
Sbjct: 338 THGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFI 397
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
++ C I+MY++ + +Q + ++FD ++ + W+++ISGYA NG A+ F +
Sbjct: 398 ND-----CFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLM 452
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ S + ++Y S+L+ DI+ + + H + IK G+ SD V S+L+ +Y +
Sbjct: 453 VAASIRIDSYICSSILSLCA---DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRS 509
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G++ +S++VF+E AWT II A+HG ++ + F M GVRPD++ +SVL
Sbjct: 510 GNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVL 569
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C RNG++ +G + F+SM Y +EP HY CMVD+LGR GRL EA+ V +P P
Sbjct: 570 SACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPD 629
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
L V +LL ACR+H + +G R + ++ SGS+ +SN+ A GDWE VA +RK
Sbjct: 630 LMVWSTLLAACRVHDDTVLG-RFVENKIREGNYDSGSFATLSNILANSGDWEEVARIRKT 688
Query: 586 MKSKGVRKEVGFS 598
M KGV KE G+S
Sbjct: 689 M--KGVNKEPGWS 699
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 161/594 (27%), Positives = 282/594 (47%), Gaps = 63/594 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG-FEKSDDALSFALRMNLI--GVVFDA 57
+++ KSG+ AL +F + + V WN +SG + L+ + +++ ++
Sbjct: 2 VDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNS 61
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TYS ALS C E G +H L+++ + +V+VG +L+ MY++ G + A R F
Sbjct: 62 FTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWR 121
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ VSW ++G+ QD D V A+L L EM+R G+ ++ + TS AC +
Sbjct: 122 MPVRNVVSWTTAIAGFVQD-DEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVRE 180
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR---MHDRNVISWTTMIS- 233
QIHG+ +K V L+STY+ + KVF + +R++ W+ IS
Sbjct: 181 ASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISG 238
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +V L + M G+ PND + + ++ N ++ G +H IK F+
Sbjct: 239 VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSV---NSIEFGGQLHSSAIKEGFIHGI 295
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + L TMY+R +++QDS KVF+E+ R+ +SW A+++G+A +G S+ A F +I +
Sbjct: 296 LVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILD 355
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+ + ++L+A E L G+ H H ++V + + MY K +
Sbjct: 356 GFKPDHVSLTAILSACNRPE--CLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQ 412
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++R+F+ T K + W+++IS A +G E ++ F+ M +R DS S+L++C
Sbjct: 413 TARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCA 472
Query: 470 -----------------------------------RNGMIHKGRHLFDSMLKDYHIEPSP 494
R+G + R +FD + P
Sbjct: 473 DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV-----PDL 527
Query: 495 DHYSCMVDMLGRVGRLEEAE---ELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
++ ++D + G + A +L+ Q+ P VL S+L AC +G VE G
Sbjct: 528 VAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQG 581
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/433 (30%), Positives = 224/433 (51%), Gaps = 20/433 (4%)
Query: 98 LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL 157
++ + ++ GRL +A RVF + +V WNA +SG ++G+ G+ A+ +M+
Sbjct: 1 MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGL-AVEMFRDMVWGSCEP 59
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
+ +++ A SAC + L +G+ +HG+ ++ V VG L++ Y+KC G A + F
Sbjct: 60 NSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREF 119
Query: 218 RRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
RM RNV+SWTT I+ +D A+ L +EM +GV N T ++ A + ++V+
Sbjct: 120 WRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVR 179
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE---LSCREIISWNALIS 329
E IHG+ +KT + V LI+ Y F ++ SEKVF+E +S R I W+A IS
Sbjct: 180 EASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFIS 237
Query: 330 GYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
G + + L L +VQ + + +PN + SV ++V S++ G + HS IK G
Sbjct: 238 GVSNHSL-LRSVQLLRRMFHQGLRPNDKCYASVFSSVN-----SIEFGGQLHSSAIKEGF 291
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
+VGSAL MY + ++ +S +VF E QE+ +WTA+++ A HG F+
Sbjct: 292 IHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRN 351
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG 508
M G +PD ++ ++L+ C R + KG+ + L+ Y + C + M +
Sbjct: 352 MILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFIN--DCFISMYSKCQ 409
Query: 509 RLEEAEELVGQIP 521
++ A + P
Sbjct: 410 GVQTARRIFDATP 422
>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 203/605 (33%), Positives = 321/605 (53%), Gaps = 14/605 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDAVT 59
MY K G + A +F+ + D+V+W ++ G+ +++++ L M+ IG + T
Sbjct: 153 MYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKT 212
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ C+D + + G LH L +K G V + +++MYSR G EA R F ++
Sbjct: 213 IGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLD 272
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
KD +SW +I++ +++ G E + EM + D + + G+ + GK
Sbjct: 273 QKDLISWTSIIAVHSKFGLMS-ECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGK 331
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----SM- 234
H +K N L+S Y K G ANK+F H ++ W+TMI +M
Sbjct: 332 AFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFH-KSSEDWSTMILGYSNMG 390
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+E +S +EM L G P+ + + +I + S + GR IH IK + + SV N
Sbjct: 391 QKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVAN 450
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
L+ MY + + + ++F R++ISWN LIS Y Q+G+ A+ F ++KE P
Sbjct: 451 SLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYP 510
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N T VL+A A SL G++ H +I + G +S+ + +AL+DMY K G + S++
Sbjct: 511 NKVTCIIVLSA--CAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRK 568
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+FN T+E+ W +IS HG ES M F+ ME ++P++ TFLS+L+ C G
Sbjct: 569 LFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGH 628
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ +GRHLFD M K Y IEPS HY+ ++D+LGR G LE AE LV +P P +V SLL
Sbjct: 629 VLEGRHLFDRMQK-YGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLL 687
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
AC+IH E+G R+A ++ +P G Y+++S+LY+ G W+ V +R MK +GV K
Sbjct: 688 SACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEK 747
Query: 594 EVGFS 598
G+S
Sbjct: 748 RAGWS 752
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/589 (24%), Positives = 270/589 (45%), Gaps = 51/589 (8%)
Query: 16 IFNNLNNPDIVSWNTVL-SGFEKSD--DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F +++ DI WN+++ S F D A F L+M + + T +S C +
Sbjct: 64 LFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMM 123
Query: 73 FLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
F G+ +H L K GL +G++ I MYS+ G + A +F E+ KD V+W A++
Sbjct: 124 FNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIV 183
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
GY Q+ + G + L EM R G ++ + S AC L GK +HG+++K G+
Sbjct: 184 GYVQNNESG-RGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFL 242
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEM 246
V + ++S YS+C +A + F ++ +++ISWT++I+++ + + + LF EM
Sbjct: 243 CFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEM 302
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+ + P+++ ++ + + EG+ H +K N L++MY +F +
Sbjct: 303 QASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHL 362
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAV 365
+ K+F + W+ +I GY+ G + ++ + P+ + SV+++
Sbjct: 363 GTANKIFHSFH-KSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSC 421
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
I++ G+ H + IK + + V ++L+DMYGK G + + R+F+ T ++ +
Sbjct: 422 SQVGAINI--GRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVIS 479
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W +IS+ + G + F +M + V P+ +T + VL+ C + +G + +
Sbjct: 480 WNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKI-HQYI 538
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV---------------------GQIPGG- 523
K+ E + + ++DM + G LE + +L G +
Sbjct: 539 KENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAM 598
Query: 524 ------------PGLSVLQSLLGACRIHGNVEMGERIADALMK--MEPA 558
P SLL AC G+V G + D + K +EP+
Sbjct: 599 EIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPS 647
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 219/451 (48%), Gaps = 16/451 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVL---SGFEKSDDALSFALRMNLIGVVFDA 57
++MY + G ++A F L+ D++SW +++ S F + L M ++ D
Sbjct: 252 LSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDE 311
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S L + + G H+ I+K NAL++MY ++G L A ++F
Sbjct: 312 IVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHS 371
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+K S W+ ++ GY+ G + I L EM+ G D S S S+C + +
Sbjct: 372 F-HKSSEDWSTMILGYSNMGQ-KEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINI 429
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+ IH +IK +VSV N LM Y K ++F R R+VISW T+IS ++
Sbjct: 430 GRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQ 489
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF +M + V PN VT I ++ A + + EG IH + F S ++
Sbjct: 490 SGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITI 549
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
LI MYA+ ++ S K+F+ R++I WN +IS Y +G +A++ F +++ES
Sbjct: 550 RTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAME-IFQLMEESN 608
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPNA TF S+L+A + G+ + K G++ ++++D+ G+ GS+
Sbjct: 609 IKPNAQTFLSLLSACNHTGHV--LEGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLEA 666
Query: 411 SQR-VFNETQEKSEFAWTAIISALARHGDYE 440
++ V + W +++SA H ++E
Sbjct: 667 AEALVLSMPITPDGTVWGSLLSACKIHNEFE 697
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 211/449 (46%), Gaps = 12/449 (2%)
Query: 69 DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
D + L HSLI+ G + V+ L+ Y+ + + +F + +KD WN+
Sbjct: 19 DFDKLLIRFWFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNS 78
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
I+ + +GDY A ++M + + S C G IHG++ K+
Sbjct: 79 IIQSHFSNGDYQ-RAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKL 137
Query: 189 G-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMNREDAVSL-- 242
G + + ++G+ + YSKC A+ +F + ++V++WT +I N E L
Sbjct: 138 GLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKC 197
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
EM G PN T A + + EG+ +HGL +K FL V + +++MY+R
Sbjct: 198 LFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSR 257
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSV 361
S +++ + F +L +++ISW ++I+ +++ GL + F+ + E P+ +
Sbjct: 258 CGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCM 317
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L G ++ I G+ H+ I+K I +ALL MY K G + + ++F+ +
Sbjct: 318 LMGFGNSDRIF--EGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKS 375
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
SE W+ +I + G E ++ +EM G PD + +SV++ C + G I+ GR +
Sbjct: 376 SE-DWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIH 434
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+K+ IE S M DM G+ G +
Sbjct: 435 CYAIKNSIIENVSVANSLM-DMYGKSGHV 462
>gi|357128364|ref|XP_003565843.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Brachypodium distachyon]
Length = 728
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 203/570 (35%), Positives = 312/570 (54%), Gaps = 20/570 (3%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP--NKDSVSWNAILSGYTQD 136
LH+ V+ S V+V AL Y++ GRL A RVFDEMP ++ VSW +++ ++
Sbjct: 136 LHAFAVRSSALSSVFVATALADAYAKAGRLALALRVFDEMPAARRNVVSWTTLVAALSRA 195
Query: 137 GDYGVEAILALIEM-MRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
G +A+ A EM G+ D ++ +A +AC L G+++H + K+G
Sbjct: 196 GRRH-DALRAFAEMRASAGVACDSHAYAAALTACADAGMLSRGREVHALCAKLGLDATPY 254
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM---- 246
V N L + Y++ G A RM R+V +WTT+IS ++A+ F M
Sbjct: 255 VANTLATLYARWGDVGRALAAVGRMGSRDVAAWTTVISSYVQTGRAKEAIEAFVAMVRNE 314
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES- 305
++ PN+ T+ +I A + + V G +HG + F S SV N L+T+YAR
Sbjct: 315 AVNAASPNEYTYAAVIAACADTSCVCLGEQLHGQVAQRGFASARSVANSLVTLYARVAGR 374
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLN 363
+ ++ VF E + ++++SW+A+ISGYAQ GL+ A F + + +PN +T S+L+
Sbjct: 375 LSAADAVFQESAAKDVVSWSAIISGYAQEGLAGEAFALFTEMRRHHCPRPNEFTLASLLS 434
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
A +L G++ H+ ++ GL+ ++ SAL+DMYGK GS+ ++ VF+ +
Sbjct: 435 VCATAA--TLDAGRQLHALVMAAGLEHHAMIRSALVDMYGKSGSMSDADVVFSNRTKDDV 492
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
+WTA+I A HG + + F+EM G++PD + F+ VL+ C G + G +
Sbjct: 493 VSWTAMIVGHAEHGQSKRALELFEEMCLVGLKPDHVAFIGVLSACCHAGEVELGLRYLSA 552
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL-QSLLGACRIHGNV 542
M K Y +EP+ +HY C+VD+LGR GR+ EAEEL+G++ V+ SLL AC G
Sbjct: 553 MSKIYGLEPAKEHYGCVVDLLGRAGRINEAEELIGRMAANERDGVVWTSLLRACAARGEE 612
Query: 543 EMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADV 602
E G++ A M+ EP G+G++V M+NLYA KG W A R MK KGV K VG+S V
Sbjct: 613 ETGKKAAARAMEAEPWGAGAHVAMANLYASKGQWCEAAQERHMMKQKGVVKGVGWSSITV 672
Query: 603 GDIDGLHG-FSSGDNTHPRSEEIYRMAECL 631
G D G F +GD THP+ IY M E +
Sbjct: 673 GGEDRAVGVFVAGDRTHPQDNVIYEMLELI 702
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 207/441 (46%), Gaps = 25/441 (5%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY-GVEAI-LALIEMMRK 153
NA + + GRL +A +FD P++D S++A+L+G+ GD+ G A+ + L
Sbjct: 44 NARLKRLVQSGRLADAHSLFDGAPHRDEASYSALLAGHAAAGDFAGAMALFVRLRRTSSS 103
Query: 154 GLRLDH-----VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
LD +S ASA L +H +++ + V V L Y+K
Sbjct: 104 SRPLDAADPFVLSLVFKASAADPGLLLPHAASLHAFAVRSSALSSVFVATALADAYAKAG 163
Query: 209 VTGDANKVFRRMH--DRNVISWTTMISM-----NREDAVSLFKEMRLD-GVCPNDVTFIG 260
A +VF M RNV+SWTT+++ R DA+ F EMR GV + +
Sbjct: 164 RLALALRVFDEMPAARRNVVSWTTLVAALSRAGRRHDALRAFAEMRASAGVACDSHAYAA 223
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
+ A + ++ GR +H LC K + P V N L T+YAR+ + + + R+
Sbjct: 224 ALTACADAGMLSRGREVHALCAKLGLDATPYVANTLATLYARWGDVGRALAAVGRMGSRD 283
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKE-----SKPNAYTFGSVLNAVGAAEDISLKH 375
+ +W +IS Y Q G + A++AF +++ + PN YT+ +V+ A + L
Sbjct: 284 VAAWTTVISSYVQTGRAKEAIEAFVAMVRNEAVNAASPNEYTYAAVIAACADTSCVCL-- 341
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGK-RGSIFESQRVFNETQEKSEFAWTAIISALA 434
G++ H + + G S V ++L+ +Y + G + + VF E+ K +W+AIIS A
Sbjct: 342 GEQLHGQVAQRGFASARSVANSLVTLYARVAGRLSAADAVFQESAAKDVVSWSAIISGYA 401
Query: 435 RHGDYESVMNQFKEMENKGV-RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
+ G F EM RP+ T S+L+VC + GR L +++ +E
Sbjct: 402 QEGLAGEAFALFTEMRRHHCPRPNEFTLASLLSVCATAATLDAGRQLH-ALVMAAGLEHH 460
Query: 494 PDHYSCMVDMLGRVGRLEEAE 514
S +VDM G+ G + +A+
Sbjct: 461 AMIRSALVDMYGKSGSMSDAD 481
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 166/352 (47%), Gaps = 20/352 (5%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAV--- 58
+Y + G +AL + + D+ +W TV+S + ++ A A+ + V +AV
Sbjct: 261 TLYARWGDVGRALAAVGRMGSRDVAAWTTVISSYVQTGRAKE-AIEAFVAMVRNEAVNAA 319
Query: 59 -----TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR-WGRLVEAR 112
TY+ ++ C D G QLH + + G S V N+L+T+Y+R GRL A
Sbjct: 320 SPNEYTYAAVIAACADTSCVCLGEQLHGQVAQRGFASARSVANSLVTLYARVAGRLSAAD 379
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGH 171
VF E KD VSW+AI+SGY Q+G G EA EM R R + + S S C
Sbjct: 380 AVFQESAAKDVVSWSAIISGYAQEGLAG-EAFALFTEMRRHHCPRPNEFTLASLLSVCAT 438
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
L+ G+Q+H + + G H + + L+ Y K DA+ VF +V+SWT M
Sbjct: 439 AATLDAGRQLHALVMAAGLEHHAMIRSALVDMYGKSGSMSDADVVFSNRTKDDVVSWTAM 498
Query: 232 ISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTN 285
I + E A+ LF+EM L G+ P+ V FIG++ A V+ G R + +
Sbjct: 499 IVGHAEHGQSKRALELFEEMCLVGLKPDHVAFIGVLSACCHAGEVELGLRYLSAMSKIYG 558
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSC--REIISWNALISGYAQNG 335
C++ + R + ++E++ ++ R+ + W +L+ A G
Sbjct: 559 LEPAKEHYGCVVDLLGRAGRINEAEELIGRMAANERDGVVWTSLLRACAARG 610
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 98/255 (38%), Gaps = 52/255 (20%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY KSG A +F+N D+VSW ++ G +S AL M L+G+ D
Sbjct: 468 VDMYGKSGSMSDADVVFSNRTKDDVVSWTAMIVGHAEHGQSKRALELFEEMCLVGLKPDH 527
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
V + LS C GL+ S + K +GL+ ++ + R GR+ EA +
Sbjct: 528 VAFIGVLSACCHAGEVELGLRYLSAMSKIYGLEPAKEHYGCVVDLLGRAGRINEAEELIG 587
Query: 117 EMP--NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
M +D V W ++L AC
Sbjct: 588 RMAANERDGVVWTSLL------------------------------------RACAARGE 611
Query: 175 LELGKQIHGVSIKM---GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS---W 228
E GK+ +++ G G HV++ N+ S CE + + M + V+ W
Sbjct: 612 EETGKKAAARAMEAEPWGAGAHVAMANLYASKGQWCEAAQERHM----MKQKGVVKGVGW 667
Query: 229 TTMISMNREDAVSLF 243
+++ + AV +F
Sbjct: 668 SSITVGGEDRAVGVF 682
>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 203/605 (33%), Positives = 321/605 (53%), Gaps = 14/605 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDAVT 59
MY K G + A +F+ + D+V+W ++ G+ +++++ L M+ IG + T
Sbjct: 183 MYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKT 242
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ C+D + + G LH L +K G V + +++MYSR G EA R F ++
Sbjct: 243 IGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLD 302
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
KD +SW +I++ +++ G E + EM + D + + G+ + GK
Sbjct: 303 QKDLISWTSIIAVHSKFGLMS-ECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGK 361
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----SM- 234
H +K N L+S Y K G ANK+F H ++ W+TMI +M
Sbjct: 362 AFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFH-KSSEDWSTMILGYSNMG 420
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+E +S +EM L G P+ + + +I + S + GR IH IK + + SV N
Sbjct: 421 QKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVAN 480
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
L+ MY + + + ++F R++ISWN LIS Y Q+G+ A+ F ++KE P
Sbjct: 481 SLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYP 540
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N T VL+A A SL G++ H +I + G +S+ + +AL+DMY K G + S++
Sbjct: 541 NKVTCIIVLSA--CAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRK 598
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+FN T+E+ W +IS HG ES M F+ ME ++P++ TFLS+L+ C G
Sbjct: 599 LFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGH 658
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ +GRHLFD M K Y IEPS HY+ ++D+LGR G LE AE LV +P P +V SLL
Sbjct: 659 VLEGRHLFDRMQK-YGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLL 717
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
AC+IH E+G R+A ++ +P G Y+++S+LY+ G W+ V +R MK +GV K
Sbjct: 718 SACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEK 777
Query: 594 EVGFS 598
G+S
Sbjct: 778 RAGWS 782
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 142/589 (24%), Positives = 270/589 (45%), Gaps = 51/589 (8%)
Query: 16 IFNNLNNPDIVSWNTVL-SGFEKSD--DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F +++ DI WN+++ S F D A F L+M + + T +S C +
Sbjct: 94 LFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMM 153
Query: 73 FLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
F G+ +H L K GL +G++ I MYS+ G + A +F E+ KD V+W A++
Sbjct: 154 FNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIV 213
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
GY Q+ + G + L EM R G ++ + S AC L GK +HG+++K G+
Sbjct: 214 GYVQNNESG-RGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFL 272
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEM 246
V + ++S YS+C +A + F ++ +++ISWT++I+++ + + + LF EM
Sbjct: 273 CFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEM 332
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+ + P+++ ++ + + EG+ H +K N L++MY +F +
Sbjct: 333 QASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHL 392
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAV 365
+ K+F + W+ +I GY+ G + ++ + P+ + SV+++
Sbjct: 393 GTANKIFHSFH-KSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSC 451
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
I++ G+ H + IK + + V ++L+DMYGK G + + R+F+ T ++ +
Sbjct: 452 SQVGAINI--GRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVIS 509
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W +IS+ + G + F +M + V P+ +T + VL+ C + +G + +
Sbjct: 510 WNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKI-HQYI 568
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV---------------------GQIPGG- 523
K+ E + + ++DM + G LE + +L G +
Sbjct: 569 KENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAM 628
Query: 524 ------------PGLSVLQSLLGACRIHGNVEMGERIADALMK--MEPA 558
P SLL AC G+V G + D + K +EP+
Sbjct: 629 EIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPS 677
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 219/451 (48%), Gaps = 16/451 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVL---SGFEKSDDALSFALRMNLIGVVFDA 57
++MY + G ++A F L+ D++SW +++ S F + L M ++ D
Sbjct: 282 LSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDE 341
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S L + + G H+ I+K NAL++MY ++G L A ++F
Sbjct: 342 IVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHS 401
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+K S W+ ++ GY+ G + I L EM+ G D S S S+C + +
Sbjct: 402 F-HKSSEDWSTMILGYSNMGQ-KEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINI 459
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+ IH +IK +VSV N LM Y K ++F R R+VISW T+IS ++
Sbjct: 460 GRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQ 519
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF +M + V PN VT I ++ A + + EG IH + F S ++
Sbjct: 520 SGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITI 579
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
LI MYA+ ++ S K+F+ R++I WN +IS Y +G +A++ F +++ES
Sbjct: 580 RTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAME-IFQLMEESN 638
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPNA TF S+L+A + G+ + K G++ ++++D+ G+ GS+
Sbjct: 639 IKPNAQTFLSLLSACNHTGHV--LEGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLEA 696
Query: 411 SQR-VFNETQEKSEFAWTAIISALARHGDYE 440
++ V + W +++SA H ++E
Sbjct: 697 AEALVLSMPITPDGTVWGSLLSACKIHNEFE 727
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 229/496 (46%), Gaps = 24/496 (4%)
Query: 34 GFEKSDDALSFALRMNLIGVVFDAVTYSTALS------------FCLDHEGFLFGLQLHS 81
GF ++ L LR++ + F + T+LS F + F LQ HS
Sbjct: 2 GFLRTQVVLMLRLRLSQFHIRFAFSSTFTSLSDSHYPNNCLHSFFSKPNLTFQSLLQFHS 61
Query: 82 LIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGV 141
LI+ G + V+ L+ Y+ + + +F + +KD WN+I+ + +GDY
Sbjct: 62 LIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQ- 120
Query: 142 EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG-YGTHVSVGNVL 200
A ++M + + S C G IHG++ K+G + + ++G+
Sbjct: 121 RAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSSF 180
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMNREDAVSL--FKEMRLDGVCPND 255
+ YSKC A+ +F + ++V++WT +I N E L EM G PN
Sbjct: 181 IYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNY 240
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
T A + + EG+ +HGL +K FL V + +++MY+R S +++ + F +
Sbjct: 241 KTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCK 300
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLK 374
L +++ISW ++I+ +++ GL + F+ + E P+ +L G ++ I
Sbjct: 301 LDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIF-- 358
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G+ H+ I+K I +ALL MY K G + + ++F+ + SE W+ +I +
Sbjct: 359 EGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSE-DWSTMILGYS 417
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
G E ++ +EM G PD + +SV++ C + G I+ GR + +K+ IE
Sbjct: 418 NMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVS 477
Query: 495 DHYSCMVDMLGRVGRL 510
S M DM G+ G +
Sbjct: 478 VANSLM-DMYGKSGHV 492
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 210/677 (31%), Positives = 344/677 (50%), Gaps = 96/677 (14%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++M+ K G+ D A F + D+ WN ++SG+ + AL M L GV D
Sbjct: 232 LDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQ 291
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ NA+I+ Y++ G+ EA + F E
Sbjct: 292 VTW-----------------------------------NAIISGYAQSGQFEEASKYFLE 316
Query: 118 M-------PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
M PN VSW A+++G Q+G Y EA+ +M+ +G++ + ++ SA SAC
Sbjct: 317 MGGLKDFKPN--VVSWTALIAGSEQNG-YDFEALSVFRKMVLEGVKPNSITIASAVSACT 373
Query: 171 HEKNLELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
+ L G++IHG IK+ + + VGN L+ Y+KC A + F + +++SW
Sbjct: 374 NLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWN 433
Query: 230 TMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS------------------ 266
M++ + E+A+ L EM+ G+ P+ +T+ GL+ +
Sbjct: 434 AMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSM 493
Query: 267 ------------------IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
+ NL K G+ IHG ++ + V + LI+MY+ +S++
Sbjct: 494 GMDPNTTTISGALAACGQVRNL-KLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEV 552
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGA 367
+ VF ELS R+++ WN++IS AQ+G S+ A+ + + + N T S L A
Sbjct: 553 ACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPA--C 610
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
++ +L+ G+ H II+ GLD+ + ++L+DMYG+ GSI +S+R+F+ ++ +W
Sbjct: 611 SKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWN 670
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
+IS HG +N F+ G++P+ ITF ++L+ C +G+I +G F M +
Sbjct: 671 VMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE 730
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGER 547
Y ++P+ + Y+CMVD+L R G+ E E + ++P P +V SLLGACRIH N ++ E
Sbjct: 731 YAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEY 790
Query: 548 IADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG 607
A L ++EP SG+YVLM+N+Y+ G WE A +R MK +GV K G SW +V
Sbjct: 791 AARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVK--RK 848
Query: 608 LHGFSSGDNTHPRSEEI 624
LH F GD +HP E+I
Sbjct: 849 LHSFVVGDTSHPLMEQI 865
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 133/571 (23%), Positives = 261/571 (45%), Gaps = 89/571 (15%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS---GFEKSDDALSFALRMNLIGVVFDA 57
+ +YC++G + A +F+ ++ ++ SW ++ G ++ + M GV D
Sbjct: 131 LEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDH 190
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ C + + + G ++ ++ G + V +++ M+ + GR+ ARR F+E
Sbjct: 191 FVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEE 250
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD WN ++SGYT G++ +A+ + +M G++ D V++
Sbjct: 251 IEFKDVFMWNIMVSGYTSKGEFK-KALKCISDMKLSGVKPDQVTW--------------- 294
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-----HDRNVISWTTMI 232
N ++S Y++ +A+K F M NV+SWT +I
Sbjct: 295 --------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALI 334
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + + +A+S+F++M L+GV PN +T + A + +L++ GR IHG CIK L
Sbjct: 335 AGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 394
Query: 288 -SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG-----LSLAAV 341
S+ V N L+ YA+ S++ + + F + +++SWNA+++GYA G + L +
Sbjct: 395 DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSE 454
Query: 342 QAFFGVIKE-------------------------------SKPNAYTFGSVLNAVGAAED 370
F G+ + PN T L A G +
Sbjct: 455 MKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRN 514
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
LK G+ H ++++ ++ VGSAL+ MY S+ + VF+E + W +II
Sbjct: 515 --LKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSII 572
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
SA A+ G + ++ +EM V +++T +S L C + + +G+ + +++ +
Sbjct: 573 SACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIR-CGL 631
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ + ++DM GR G ++++ + +P
Sbjct: 632 DTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 662
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 224/474 (47%), Gaps = 53/474 (11%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y++ L C G Q+H+ +V G+D ++G+ L+ +Y + G + +ARR+FD+M
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ SW AI+ Y GDY E I M+ +G+R DH F AC KN +GK
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYE-ETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 210
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR--- 236
++ + +G+ + V ++ + KC A + F + ++V W M+S
Sbjct: 211 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 270
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+ A+ +M+L GV P+ VT+ N
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTW-----------------------------------N 295
Query: 295 CLITMYARFESMQDSEKVFDELSCRE-----IISWNALISGYAQNGLSLAAVQAFFGVIK 349
+I+ YA+ +++ K F E+ + ++SW ALI+G QNG A+ F ++
Sbjct: 296 AIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVL 355
Query: 350 ES-KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRG 406
E KPN+ T S AV A ++S L+HG+ H + IKV LDSD +VG++L+D Y K
Sbjct: 356 EGVKPNSITIAS---AVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCR 412
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
S+ ++R F ++ +W A+++ A G +E + EM+ +G+ PD IT+ ++T
Sbjct: 413 SVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVT 472
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ G F M ++P+ S + G+V L+ +E+ G +
Sbjct: 473 GFTQYGDGKAALEFFQRM-HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYV 525
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 196/643 (30%), Positives = 344/643 (53%), Gaps = 24/643 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF------EKSDDALSFALRMNLIGVV 54
++ + + G D+A I+ L + V+ N +++G E + + A + V
Sbjct: 320 VSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD 379
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARR 113
V S F +G G ++H+ +++ G + ++ V N L+ MY++ G + +A R
Sbjct: 380 TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACR 439
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VF M +D +SWN I++ Q+G Y A++ M + + + + S S+C
Sbjct: 440 VFQLMEARDRISWNTIITALDQNG-YCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLG 498
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L G+Q+H ++K G SV N L+ Y +C + ++F M +V+SW +++
Sbjct: 499 LLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMG 558
Query: 234 MNRE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ ++V +F M G+ PN VTF+ + A++ ++++ G+ IH + +K
Sbjct: 559 VMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVT 618
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAFFG 346
+ +V N L++ YA+ + E++F +S R + ISWN++ISGY NG A+
Sbjct: 619 EDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCL 678
Query: 347 VI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ E + TF VLNA + +L+ G H+ ++ L+SD +V SAL+DMY K
Sbjct: 679 MMHSEQMMDHCTFSIVLNACASVA--ALERGMEMHAFGLRSHLESDVVVESALVDMYSKC 736
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G I + +VF+ +K+EF+W ++IS ARHG + F+EM+ G PD +TF+SVL
Sbjct: 737 GRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVL 796
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ +G F+ +++DY I P +HYSC++D+LGR G L++ +E + ++P P
Sbjct: 797 SACSHAGLVERGLDYFE-LMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPN 855
Query: 526 LSVLQSLLGAC---RIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
+ +++L AC + +++G + L+++EP +YVL S +A G WE A
Sbjct: 856 TLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKA 915
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
R MK V+KE G SW + DG+H F +GD +HP ++EIY
Sbjct: 916 RAAMKGAAVKKEAGRSWVTL--TDGVHTFIAGDRSHPNTKEIY 956
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 233/462 (50%), Gaps = 31/462 (6%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH +VK GL ++++ N L+ Y++ RL ARRVFD MP +++VSW ++SG+ G
Sbjct: 87 LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSG- 145
Query: 139 YGVEAILALIEMMRKGLRLDHVSFT--SAASACGHEKNLELG--KQIHGVSIKMGYGTHV 194
+A M+R+G SFT S AC LG Q+HG+ K + ++
Sbjct: 146 LPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNT 205
Query: 195 SVGNVLMSTYSKCEVTGD--ANKVFRRMHDRNVISWTTMISM--NREDAV---SLFKEMR 247
+V N L+S Y C V A +VF R++I+W ++S+ R DA+ +LF+ M+
Sbjct: 206 TVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQ 265
Query: 248 LDG----VCPNDVTFIGLIHAI-----SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
D + P + TF LI A S+G L + + +K+ S+ V + L++
Sbjct: 266 YDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQ----LFVRVLKSGCSSDLYVGSALVS 321
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTF 358
+AR + +++ ++ L R ++ N LI+G + AA + F G + N T+
Sbjct: 322 AFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTY 381
Query: 359 GSVLNAVG--AAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVF 415
+L+A+ + + L+ G+ H+H+++ G I V + L++MY K G+I ++ RVF
Sbjct: 382 VVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVF 441
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ + +W II+AL ++G E+ M + M + P + +S L+ C G++
Sbjct: 442 QLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLA 501
Query: 476 KGRHLF-DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
G+ L D++ +++ S + +V M G GR+ E E+
Sbjct: 502 AGQQLHCDAVKWGLYLDTSVS--NALVKMYGECGRMSECWEI 541
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 136/543 (25%), Positives = 264/543 (48%), Gaps = 36/543 (6%)
Query: 1 MNMY--CKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSF-----ALRMNLIGV 53
++MY C G A +F+ D+++WN ++S + K DA+ A++ + G+
Sbjct: 212 ISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGI 271
Query: 54 -------VFDAVTYSTALSFCLDHEGFLFGL--QLHSLIVKFGLDSEVYVGNALITMYSR 104
F ++ +T LS C GL QL ++K G S++YVG+AL++ ++R
Sbjct: 272 ELRPTEHTFGSLITATYLSSCS------LGLLDQLFVRVLKSGCSSDLYVGSALVSAFAR 325
Query: 105 WGRLVEARRVFDEMPNKDSVSWNAILSGYT--QDGDYGVEAILALIEMMRKGLRLDHVSF 162
G L EA+ ++ + +++V+ N +++G Q G+ E + + + V
Sbjct: 326 HGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLL 385
Query: 163 TSAASACGHEKNLELGKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
++ A E+ L G+++H ++ G+ ++V N L++ Y+KC A +VF+ M
Sbjct: 386 SAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLME 445
Query: 222 DRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
R+ ISW T+I+ ++ A+ + MR + + P++ I + + + L+ G+
Sbjct: 446 ARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQ 505
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
+H +K + SV N L+ MY M + ++F+ +S +++SWN+++ A +
Sbjct: 506 LHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQA 565
Query: 337 SLA-AVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
+ +VQ F ++K PN TF + L A+ + L G++ HS ++K G+ D V
Sbjct: 566 PITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLEL--GKQIHSVMLKHGVTEDNAV 623
Query: 395 GSALLDMYGKRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+AL+ Y K G + +R+F+ + + +W ++IS +G + M+ M +
Sbjct: 624 DNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSE 683
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
D TF VL C + +G + L+ H+E S +VDM + GR++ A
Sbjct: 684 QMMDHCTFSIVLNACASVAALERGMEMHAFGLRS-HLESDVVVESALVDMYSKCGRIDYA 742
Query: 514 EEL 516
++
Sbjct: 743 SKV 745
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 236/512 (46%), Gaps = 30/512 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNT-----VLSGFEKSDDALSFALRMNLIGVVF 55
+N Y K + D A +F+ + + VSW VLSG + L A+ G
Sbjct: 107 VNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRP 166
Query: 56 DAVTYSTALSFCLDH--EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW--GRLVEA 111
+ T+ + L C D + F +Q+H L+ K S V NALI+MY G + A
Sbjct: 167 TSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILA 226
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-----LRLDHVSFTSAA 166
+RVFD P +D ++WNA++S Y + GD L M+ LR +F S
Sbjct: 227 QRVFDTTPVRDLITWNALMSVYAKRGD--AICTFTLFRAMQYDDSGIELRPTEHTFGSLI 284
Query: 167 SACGHEK-NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
+A +L L Q+ +K G + + VG+ L+S +++ + +A ++ + +RN
Sbjct: 285 TATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNA 344
Query: 226 ISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI----SIGNLVKEGRM 276
++ +I+ + E A +F R D N T++ L+ AI + +++GR
Sbjct: 345 VTLNGLIAGLVKQQHGEAAAEIFMGAR-DSAAVNVDTYVVLLSAIAEFSTAEQGLRKGRE 403
Query: 277 IHGLCIKTNFL-SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
+H ++ + + +V N L+ MYA+ ++ + +VF + R+ ISWN +I+ QNG
Sbjct: 404 VHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNG 463
Query: 336 LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
AA+ + +++++ F ++ A L GQ+ H +K GL D V
Sbjct: 464 YCEAAMMNYC-LMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVS 522
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA-RHGDYESVMNQFKEMENKGV 454
+AL+ MYG+ G + E +FN +W +I+ +A + F M G+
Sbjct: 523 NALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGL 582
Query: 455 RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
P+ +TF++ L ++ G+ + MLK
Sbjct: 583 VPNKVTFVNFLAALTPLSVLELGKQIHSVMLK 614
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 168/354 (47%), Gaps = 20/354 (5%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN--- 235
+ +H +K G + + N L+++Y+K A +VF M RN +SWT +IS +
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 236 --REDAVSLFKEMRLDGV-C-PNDVTFIGLIHAISIGNLVKEG--RMIHGLCIKTNFLSE 289
EDA LF+ M +G C P TF ++ A + G +HGL KT F S
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204
Query: 290 PSVCNCLITMYARFESMQD--SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+VCN LI+MY +++VFD R++I+WNAL+S YA+ G ++ F +
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264
Query: 348 IK-----ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
E +P +TFGS++ A + SL + ++K G SD VGSAL+ +
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSS-CSLGLLDQLFVRVLKSGCSSDLYVGSALVSAF 323
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK-EMENKGVRPDSITF 461
+ G + E++ ++ +E++ +I+ L + E+ F ++ V D+
Sbjct: 324 ARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVV 383
Query: 462 L--SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
L ++ + KGR + +L+ HI + +V+M + G +++A
Sbjct: 384 LLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKA 437
>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 774
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 216/678 (31%), Positives = 342/678 (50%), Gaps = 62/678 (9%)
Query: 14 LCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGF 73
CI NL I T+ LS L+ NL + ++ Y+ S L F
Sbjct: 29 FCILQNLYYASIAQPETIARNVNTQIHTLS--LQGNLEKAL--SLVYTNP-SLTLQDYAF 83
Query: 74 LF-----------GLQLHSLIVKF--GLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
LF G+ LH I+ + +++++ N L+ MY + G L AR +FD+MP
Sbjct: 84 LFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPR 143
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
++ VSW ++SGY Q G + AL M R + +F S AC E++++ G Q
Sbjct: 144 RNFVSWTVLVSGYAQFG--LIRECFALFSGMLACFRPNEFAFASVLCAC-EEQDVKYGLQ 200
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKC---------EVTGDANKVFRRMHDRNVISWTTM 231
+H ++KM V V N L++ YSKC + T DA VF+ M RN+ISW +M
Sbjct: 201 VHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSM 260
Query: 232 ISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLI----HAISIGNLV------KEGRM 276
IS + + A+ LF M +G+ N T +G++ H +S + + K
Sbjct: 261 ISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQ 320
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFE-SMQDSEKVF-DELSCREIISWNALISGYAQN 334
+H L +K+ +SE V L+ YA + D K+F D +I+SW A+IS +A+
Sbjct: 321 LHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAER 380
Query: 335 GLSLAAVQAFFGVIKESKPN----AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
QAF + + N +TF L A A ++ K+ HS ++K G +
Sbjct: 381 D----PEQAFLLFCQLHRENFVLDRHTFSIALKA--CAYFVTEKNATEVHSQVMKQGFHN 434
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D +V +AL+ YG+ GS+ S++VF E +W +++ + A HG + ++ FK+M+
Sbjct: 435 DTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQMD 494
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
V PDS TF+++L C G++ +G +F+SM + + I P DHYSCMVD+ GR G++
Sbjct: 495 ---VHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKI 551
Query: 511 EEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLY 570
EAEEL+ ++P P + SLLG+CR HG ++ + AD ++P S +Y+ MSN+Y
Sbjct: 552 FEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQMSNIY 611
Query: 571 AEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAEC 630
+ G + ++RK M+ VRK G SW +VG +H F+SG HP+ + I E
Sbjct: 612 SSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVG--KQVHEFTSGGQHHPKRQAILSRLET 669
Query: 631 LGSEMKYLNSKRERAIAL 648
L ++K + E AL
Sbjct: 670 LIGQLKEMGYAPEIGSAL 687
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 229/471 (48%), Gaps = 43/471 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS-FALRMNLIGVVF-DAV 58
+NMYCK G D A +F+ + + VSW ++SG+ + FAL ++ +
Sbjct: 122 LNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGMLACFRPNEF 181
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWG---------RLV 109
+++ L C + + +GLQ+H+ +K LD VYV NALITMYS+
Sbjct: 182 AFASVLCAC-EEQDVKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTD 240
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
+A VF M ++ +SWN+++SG+ G G +AI M G+R + + S+
Sbjct: 241 DAWMVFKSMEYRNLISWNSMISGFQFRG-LGDKAIGLFAHMYCNGIRFNSTTLLGVLSSL 299
Query: 170 GH----------EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR 219
H +L+ Q+H +++K G + V V L+ +Y+ ++ G + F+
Sbjct: 300 NHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYA--DLGGHISDCFKL 357
Query: 220 MHD----RNVISWTTMISM----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
D +++SWT +IS+ + E A LF ++ + + TF + A +
Sbjct: 358 FLDTSGEHDIVSWTAIISVFAERDPEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTE 417
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
K +H +K F ++ V N LI Y R S+ SE+VF E+ C +++SWN+++ Y
Sbjct: 418 KNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSY 477
Query: 332 AQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGL 388
A +G + A+ F + + P++ TF ++L A G E+ + SH I L
Sbjct: 478 AIHGRAKDALDLFKQM--DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHL 535
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGD 438
D S ++D+YG+ G IFE++ + + K + W++++ + +HG+
Sbjct: 536 DH----YSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGE 582
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 181/536 (33%), Positives = 307/536 (57%), Gaps = 19/536 (3%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
N LI MY + + A +VFD MP ++ VSW A++SG+ +GD L EM R+G+
Sbjct: 408 NYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSL-FTEMGRQGI 466
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
+ +F++ ACG LE G QIHG +K+G+ V VGN L+ YSKC +A K
Sbjct: 467 YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEK 526
Query: 216 VFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVC--PNDVTFIGLIHAISIG 268
VFR M R++ISW MI+ A++ F M+ + P++ T L+ A S
Sbjct: 527 VFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSST 586
Query: 269 NLVKEGRMIHGLCIKTNF--LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNA 326
++ G+ IHG +++ F S ++ L+ +Y + ++ + K FD++ + +ISW++
Sbjct: 587 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSS 646
Query: 327 LISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGAAEDISL-KHGQRCHSHI 383
LI GYAQ G + A+ F ++E S+ +++ S+ +G D +L + G++ + +
Sbjct: 647 LILGYAQEGDFVEAM-GLFKRLQELSSQIDSFVLSSI---IGVFADFALLQQGKQMQALV 702
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
+K+ + V ++L+DMY K G + E+++ F E Q K +WT +I+ +HG + +
Sbjct: 703 VKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAV 762
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
+ F +M + PD + +L+VL+ C +GMI +G LF +L+ I+P +HY+C+VD+
Sbjct: 763 SIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDL 822
Query: 504 LGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSY 563
LGR GRL+EA+ LV +P P + + Q+LL CR+HG++E+G+ + L++++ +Y
Sbjct: 823 LGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANY 882
Query: 564 VLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHP 619
V+MSNLY + G W R+ KG++KE G SW ++ +H F SG+++HP
Sbjct: 883 VMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIE--REVHFFRSGEDSHP 936
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 233/456 (51%), Gaps = 20/456 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MYCK + A +F+++ ++VSW ++SG + D +LS M G+ +
Sbjct: 411 IDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNE 470
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ST L C GLQ+H +K G + V VGN+L+ MYS+ GR+ EA +VF
Sbjct: 471 FTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRW 530
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL---RLDHVSFTSAASACGHEKN 174
M + +SWNA+++GY G YG A LA MM++ R D + TS AC
Sbjct: 531 MVGRSLISWNAMIAGYVHAG-YGSRA-LATFGMMQEAKIKERPDEFTLTSLLKACSSTGM 588
Query: 175 LELGKQIHGVSIKMGY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ GKQIHG ++ G+ + ++ L+ Y KC A K F ++ ++ +ISW+++I
Sbjct: 589 IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLI 648
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ +A+ LFK ++ + +I + L+++G+ + L +K
Sbjct: 649 LGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSG 708
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
E SV N L+ MY + + ++EK F E+ +++ISW +I+GY ++GL AV F +
Sbjct: 709 LETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKM 768
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKR 405
++ + +P+ + +VL+A + I K G+ S +++ G+ + ++D+ G+
Sbjct: 769 LRHNIEPDEVCYLAVLSACSHSGMI--KEGEELFSKLLETQGIKPRVEHYACVVDLLGRA 826
Query: 406 GSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
G + E++ + + K W ++S HGD E
Sbjct: 827 GRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIE 862
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 196/651 (30%), Positives = 341/651 (52%), Gaps = 21/651 (3%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAV-----TYST 62
G+ D+A+ + PD N ++ GF +D L G++ D T+
Sbjct: 55 GRMDEAVEALAAVRGPDAFLHNVMIRGF--ADAGLPAGALAAYRGMLEDGARPDRFTFPV 112
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
+ C G G H +++K GL+ +VY N+L+ Y++ G + +A RVFD MP +D
Sbjct: 113 VVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRD 172
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH--VSFTSAASACGHEKNLELGKQ 180
V+WN ++ GY +G G A LA + M L + H V +A +AC E + GK+
Sbjct: 173 IVTWNIMVDGYVSNG-LGSLA-LACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKE 230
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMNR- 236
IHG I+ G + VG L+ Y KC A VF M R V++W MI ++N
Sbjct: 231 IHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNER 290
Query: 237 -EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
++A F +MR +G+ VT I L+ A + GR +HG ++ FL +
Sbjct: 291 PDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETA 350
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
L+ MY + ++ SEK+F +++ + ++SWN +I+ Y + A+ F ++ + P+
Sbjct: 351 LLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPD 410
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
+T +V+ A SL+H ++ HS+II +G + ++ +A+L MY + G + S+ +
Sbjct: 411 YFTMSTVVPAFVLLG--SLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREI 468
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F++ K +W +I A HG ++ + F EM+ G++P+ TF+SVLT C +G++
Sbjct: 469 FDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLV 528
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
+G F+ ML++Y + P +HY CM D+LGR G L E + + +P P V SLL
Sbjct: 529 DEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLT 588
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
A R ++++ E A+ + ++E +G Y+++S++YA+ G WE V +R MK KG+R+
Sbjct: 589 ASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRT 648
Query: 595 VGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
S ++ F++GD +H +S I+ +++ L ++K + R ++
Sbjct: 649 EPISLVELHSTAC--SFANGDMSHSQSRTIHEVSDILSRKIKETDDTRNQS 697
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 193/372 (51%), Gaps = 13/372 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRM-----NLIGVVFDAV 58
Y K G + A +F+ + DIV+WN ++ G+ S+ S AL + + V D+V
Sbjct: 152 YAKLGLVEDAERVFDGMPVRDIVTWNIMVDGY-VSNGLGSLALACFQEMHDALEVQHDSV 210
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
AL+ C + G ++H +++ GL+ ++ VG +L+ MY + G + AR VF M
Sbjct: 211 GIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATM 270
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P + V+WN ++ GY + + EA ++M +GL+++ V+ + +AC ++ G
Sbjct: 271 PLRTVVTWNCMIGGYALN-ERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYG 329
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNR 236
+ +HG ++ + HV + L+ Y K + K+F ++ ++ ++SW MI+ M +
Sbjct: 330 RSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYK 389
Query: 237 E---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E +A++LF E+ + P+ T ++ A + ++ R IH I + +
Sbjct: 390 EMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIM 449
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N ++ MYAR + S ++FD++ +++ISWN +I GYA +G A++ F + +
Sbjct: 450 NAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQ 509
Query: 353 PNAYTFGSVLNA 364
PN TF SVL A
Sbjct: 510 PNESTFVSVLTA 521
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 152/291 (52%), Gaps = 9/291 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MYCK G+ A +F + +V+WN ++ G+ E+ D+A ++M G+ +
Sbjct: 251 LDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEV 310
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT L+ C E L+G +H +V+ V + AL+ MY + G++ + ++F +
Sbjct: 311 VTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGK 370
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ NK VSWN +++ Y Y EAI +E++ + L D+ + ++ A +L
Sbjct: 371 IANKTLVSWNNMIAAYMYKEMY-TEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRH 429
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM-----I 232
+QIH I +GY + + N ++ Y++ + ++F +M ++VISW TM I
Sbjct: 430 CRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAI 489
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
+ A+ +F EM+ +G+ PN+ TF+ ++ A S+ LV EG M L ++
Sbjct: 490 HGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQ 540
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY +SG + IF+ + + D++SWNT++ G+ + AL M G+ +
Sbjct: 453 LHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNE 512
Query: 58 VTYSTALSFC----LDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
T+ + L+ C L EG++ F L L ++G+ ++ + + R G L E
Sbjct: 513 STFVSVLTACSVSGLVDEGWMHFNLMLQ----EYGMIPQIEHYGCMTDLLGREGDLREVL 568
Query: 113 RVFDEMP-NKDSVSWNAILSGYTQDGD-----YGVEAILAL 147
+ + MP + S W ++L+ D Y E I L
Sbjct: 569 QFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQL 609
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 314/592 (53%), Gaps = 15/592 (2%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
M G+ +Y C + G H + + + ++ N+++ MY + G
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSA 165
L +AR+VFDEM ++ VSWN I+S Y ++G D G ++E+ K ++ F +
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
+ LE+GKQIH +I+ G G++ SV + + Y KC A VF +M ++N
Sbjct: 121 LL---NPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNA 177
Query: 226 ISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
++WT ++ + + DA++LF +M +GV ++ F ++ A + + GR IHG
Sbjct: 178 VAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGH 237
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+K SE SV L+ Y + +++ + K F+ +S +SW+ALI+GY Q G A
Sbjct: 238 IVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEA 297
Query: 341 VQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
++ F + S N++T+ S+ A A D + G + H+ IK L + SA++
Sbjct: 298 LKTFESLRTRSVDINSFTYTSIFQACSALADFN--SGAQAHADAIKSSLVAYQHGESAMI 355
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
MY + G + + RVF + AWTAII+ A G+ + F+ M++ GVRP+++
Sbjct: 356 TMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAV 415
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
TF++VLT C +G++ +GR +SM +Y + + DHY CMVD+ R G L+EA EL+
Sbjct: 416 TFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRS 475
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P P + LLG C + N+E+GE A+ L +++P + Y+LM NLYA G W+
Sbjct: 476 MPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEA 535
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
A +RK M + +RKE+ SW V +H F GD HP++EEIY E L
Sbjct: 536 ANVRKMMAERNLRKELSCSWITVK--GKVHRFIVGDKHHPQTEEIYSKLEAL 585
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 189/377 (50%), Gaps = 18/377 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MYCK G A +F+ + ++VSWNT++S + ++ D M + +
Sbjct: 52 LKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNG 111
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY L L+ G G Q+HS ++ GL S V A+ MY + G L A VF++
Sbjct: 112 STYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEK 171
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K++V+W I+ GYTQ + ++A+ +M+ +G+ LD F+ AC + L
Sbjct: 172 MSEKNAVAWTGIMVGYTQ-AERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNF 230
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+QIHG +K+G + VSVG L+ Y KC A K F + + N +SW+ +I+
Sbjct: 231 GRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQ 290
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E+A+ F+ +R V N T+ + A S G H IK++ ++
Sbjct: 291 MGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHG 350
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGV 347
+ +ITMY+R + + +VF+ + + ++W A+I+GYA G + A++ F GV
Sbjct: 351 ESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGV 410
Query: 348 IKESKPNAYTFGSVLNA 364
+PNA TF +VL A
Sbjct: 411 ----RPNAVTFIAVLTA 423
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 176/341 (51%), Gaps = 15/341 (4%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAV 58
NMY K G + A +F ++ + V+W ++ G+ E+ DAL+ +M GV D
Sbjct: 154 NMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEY 213
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+S L C E FG Q+H IVK GL+SEV VG L+ Y + L A + F+ +
Sbjct: 214 VFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWI 273
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLEL 177
+ VSW+A+++GY Q G++ E L E +R + + ++ ++TS AC +
Sbjct: 274 SEPNDVSWSALITGYCQMGEF--EEALKTFESLRTRSVDINSFTYTSIFQACSALADFNS 331
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G Q H +IK + + +++ YS+C A +VF + D + ++WT +I+
Sbjct: 332 GAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAY 391
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N +A+ LF+ M+ GV PN VTFI ++ A S LV EGR + + +N+ ++
Sbjct: 392 QGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQ-YLESMSSNYGVATTI 450
Query: 293 --CNCLITMYARFESMQDSEKVFDELS-CREIISWNALISG 330
+C++ +Y+R +Q++ ++ + + +SW L+ G
Sbjct: 451 DHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 209/658 (31%), Positives = 355/658 (53%), Gaps = 44/658 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNL---NNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVV 54
++MY K G A F+ L + D+V+WN ++S F + + +AL M+ G
Sbjct: 183 ISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAP 242
Query: 55 F-DAVTYSTALSFCLDHEGFLFGLQ----LHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
++VT+ + L C+ E L L+ +H IV G++ E +V AL+ Y + G L
Sbjct: 243 PPNSVTFVSVLDSCV--EAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLD 300
Query: 110 EARRVF----DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
+A VF DE P+ V+ +A++S Q+G + E++ M +G + V+ S
Sbjct: 301 DAWEVFLRKGDEEPSTSLVTCSAMISACWQNG-WPQESLRLFFAMNLEGTKPSGVTLVSV 359
Query: 166 ASACGHEKNLELGKQIHGV---SIKMGYGTHVSV-GNVLMSTYSKCEVTGDANKVFRRMH 221
+AC L++G V ++++ T +V G L++TY++ A F +
Sbjct: 360 LNACSM---LQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQ 416
Query: 222 DRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISI---GNLVKE 273
+V+SW M + +A+ LF+ M L+GV P+ TFI + A +
Sbjct: 417 SPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAI 476
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC--REIISWNALISGY 331
G+ I L + + +V N + MYA+ S+ D+ VF+ +S R+ I+WN++++ Y
Sbjct: 477 GKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAY 536
Query: 332 AQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
+GL A + F + E KPN TF +VL+A + S+ G+ H+ ++ G +
Sbjct: 537 GHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDA--STSRTSIAQGREIHARVVSNGFE 594
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE--FAWTAIISALARHGDYESVMNQFK 447
SD ++ +ALL+MY K GS+ ++Q +F+++ E AWT++I+ A++G E + F
Sbjct: 595 SDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFW 654
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
M+ +GVRP+ +TF+S LT C G + +G L M D+ I P+ H+SC+VD+LGR
Sbjct: 655 TMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRC 714
Query: 508 GRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMS 567
GRL+EAE+L+ + ++ + +LL AC+ +E GER A+ +M+++P + SY++++
Sbjct: 715 GRLDEAEKLLERTSQADVITWM-ALLDACKNSKELERGERCAERIMQLDPEVASSYIVLA 773
Query: 568 NLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
++YA G W A +RK M KG+R + G S +V LH FS+GD +HP+SEEIY
Sbjct: 774 SMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVN--QELHSFSAGDKSHPKSEEIY 829
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 229/462 (49%), Gaps = 23/462 (4%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP---NKDSVSWNAILSG 132
G ++HS I + +GNALI+MYS+ G L++A++ FD +P +D V+WNA++S
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219
Query: 133 YTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEK--NLELGKQIHGVSIKMG 189
+ ++G EA+ +M R G + V+F S +C +LE + IHG + G
Sbjct: 220 FLRNGS-AREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAG 278
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR----NVISWTTMISMN-----REDAV 240
V L+ +Y K DA +VF R D ++++ + MIS ++++
Sbjct: 279 IEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESL 338
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC-NCLITM 299
LF M L+G P+ VT + +++A S+ + + ++ + +V L+T
Sbjct: 339 RLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTT 398
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
YAR + + FD + +++SWNA+ + Y Q+ S A+ F ++ E +P+ TF
Sbjct: 399 YARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATF 458
Query: 359 GSVLNAVGA-AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
+ L A A + G+R S + + GL+ D V +A L+MY K GS+ +++ VF
Sbjct: 459 ITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFER 518
Query: 418 TQ--EKSEFAWTAIISALARHGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCGRNGMI 474
+ W ++++A HG + F+ ME K V+P+ +TF++VL I
Sbjct: 519 ISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSI 578
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+GR + ++ + E + +++M + G L++A+ +
Sbjct: 579 AQGREIHARVVSN-GFESDTVIQNALLNMYAKCGSLDDAQAI 619
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 233/509 (45%), Gaps = 40/509 (7%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIV--KFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
TY L C G +LH+ I+ + L + ++ + LI M+++ G L EA + D
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ S + A++ + + G + + L + M +R + + + +AC NL
Sbjct: 105 RFASVYSCT--AMIRAWMEHGR--PDKAMELFDRME--VRPNCHALIALVNACSCLGNLA 158
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM---HDRNVISWTTMIS 233
G++IH + + +GN L+S YSKC DA + F R+ R+V++W MIS
Sbjct: 159 AGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMIS 218
Query: 234 M-----NREDAVSLFKEMRLDGV-CPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTN 285
+ +A+ LF++M DG PN VTF+ ++ + L +++ R IHG +
Sbjct: 219 AFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAG 278
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVF----DELSCREIISWNALISGYAQNGLSLAAV 341
E V L+ Y + S+ D+ +VF DE +++ +A+IS QNG ++
Sbjct: 279 IEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESL 338
Query: 342 QAFFGV-IKESKPNAYTFGSVLNA-----VGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
+ FF + ++ +KP+ T SVLNA VG+A L+ V D ++G
Sbjct: 339 RLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEV------VSATRDNVLG 392
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+ LL Y + + ++ F+ Q +W A+ +A +H + F+ M +GVR
Sbjct: 393 TTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVR 452
Query: 456 PDSITFLSVLTVCGR---NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
P TF++ LT C G+ + S+L++ +E + ++M + G L +
Sbjct: 453 PSVATFITALTACAAYPPQTASAIGKRI-QSLLEEAGLEGDTAVANATLNMYAKCGSLAD 511
Query: 513 AEELVGQI-PGGPGLSVLQSLLGACRIHG 540
A + +I P S+L A HG
Sbjct: 512 ARAVFERISPARRDCITWNSMLAAYGHHG 540
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 199/651 (30%), Positives = 333/651 (51%), Gaps = 86/651 (13%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP--NKDSVSWNAILSGYTQD 136
L + V F D +L++ Y+ GRL ++ FD +P +D+V NA++S + +
Sbjct: 76 LATPAVLFRADPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFAR- 134
Query: 137 GDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNLELG--KQIHGVSIKMGYGT 192
A+ ++ LR D SFTS SA G +L + Q+H K+G G
Sbjct: 135 ASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGA 194
Query: 193 HVSVGNVLMSTYSKCE---VTGDANKVFRRMHDRNVISWTTMI----------------- 232
+SV N L++ Y KC+ VT DA KV M +++ ++WTT++
Sbjct: 195 VLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFE 254
Query: 233 -------------------SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE 273
S +A LF+ M + P++ TF L+ A +
Sbjct: 255 EIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLH 314
Query: 274 GRMIHGLCIK--TNFLSEPS--VCNCLITMYARFESMQDSEKVFDELSCREIISWNALIS 329
G+ +HG I+ +F+ E + V N L+T+Y++ + + K+FD ++ ++++SWN ++S
Sbjct: 315 GKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILS 374
Query: 330 GYAQNG-------------------------------LSLAAVQAFFGVIKES-KPNAYT 357
GY ++G L+ A++ F + E KP YT
Sbjct: 375 GYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYT 434
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
+ + A G E +LKHG++ H+H+++ G ++ G+ALL MY + G++ +++ VF
Sbjct: 435 YAGAVAACG--ELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLV 492
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
+W A+ISAL +HG + F +M +G+ PD I+FL++LT C G++ G
Sbjct: 493 MPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDG 552
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
F+SM +D+ I P DHY+ ++D+LGR GR+ EA +L+ +P P ++ +++L CR
Sbjct: 553 FQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCR 612
Query: 538 IHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGF 597
I+G++E+G AD L KM P G+Y+L+SN Y+ G W A +RK M+ +GV+KE G
Sbjct: 613 INGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGC 672
Query: 598 SWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
SW +VG + +H F GD HP + E+YR E +G++M+ L + AL
Sbjct: 673 SWIEVG--NKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFAL 721
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 139/539 (25%), Positives = 225/539 (41%), Gaps = 115/539 (21%)
Query: 1 MNMYCKSGQFDKALCIFNNLN--NPDIVSWNTVLSGFEK----------------SDDAL 42
++ Y +G+ + F+++ D V N ++S F + SDD+L
Sbjct: 96 VSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSL 155
Query: 43 -----SFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNA 97
SF ++ +G + D A+S C QLH + K G + + V NA
Sbjct: 156 RPDDYSFTSLLSAVGQMHD-----LAVSHCT---------QLHCAVHKLGAGAVLSVSNA 201
Query: 98 LITMYSRW---GRLVEARRVFDEMPNKDSVS----------------------------- 125
LI +Y + G +AR+V DEMP KD ++
Sbjct: 202 LIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFD 261
Query: 126 --WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
WNA++SGY Q G EA M+ K + D +FTS SAC + GK +HG
Sbjct: 262 VVWNAMISGYVQSG-MCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHG 320
Query: 184 VSIKMGYG----THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN---- 235
I++ + V N L++ YSK A K+F M ++V+SW T++S
Sbjct: 321 QFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESG 380
Query: 236 --------------------------------REDAVSLFKEMRLDGVCPNDVTFIGLIH 263
EDA+ LF +MR + V P D T+ G +
Sbjct: 381 CLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVA 440
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
A +K G+ +H ++ F + S N L+TMYAR +++D+ VF + + +S
Sbjct: 441 ACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVS 500
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
WNA+IS Q+G A++ F ++ + P+ +F ++L A A + Q S
Sbjct: 501 WNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVD-DGFQYFESM 559
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G+ + L+D+ G+ G I E++ + E + W AI+S +GD E
Sbjct: 560 ERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDME 618
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 182/411 (44%), Gaps = 49/411 (11%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
+ + G A F ++ V WN ++SG+ +S +A RM + D T+
Sbjct: 240 HVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTF 299
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLD----SEVYVGNALITMYSRWGRLVEARRVFD 116
++ LS C + FL G +H ++ D + + V NAL+T+YS+ G++ A ++FD
Sbjct: 300 TSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFD 359
Query: 117 EMPNKDSVSWNAILSGYTQDG------------DYG-----------------VEAILAL 147
M KD VSWN ILSGY + G Y E L L
Sbjct: 360 SMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKL 419
Query: 148 IEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
MR + ++ ++ A +ACG L+ GKQ+H ++ G+ S GN L++ Y++
Sbjct: 420 FNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYAR 479
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGL 261
C DA VF M + + +SW MIS + +A+ LF +M G+ P+ ++F+ +
Sbjct: 480 CGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTI 539
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC--LITMYARFESMQDSEKVFDELSCR 319
+ A + LV +G + ++ +F P + LI + R + ++ + +
Sbjct: 540 LTACNHAGLVDDG-FQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFE 598
Query: 320 EIIS-WNALISGYAQNG---LSLAAVQAFFGVIKESKPNAYTFGSVLNAVG 366
+ W A++SG NG L A F ++ E + +A G
Sbjct: 599 PTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAG 649
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY + G A +F + N D VSWN ++S + +AL +M G+ D
Sbjct: 474 LTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDR 533
Query: 58 VTYSTALSFCLDHEGFL-FGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+++ T L+ C +H G + G Q S+ FG+ LI + R GR+ EAR +
Sbjct: 534 ISFLTILTAC-NHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLI 592
Query: 116 DEMPNKDSVS-WNAILSGYTQDGDYGVEAILA 146
MP + + + W AILSG +GD + A A
Sbjct: 593 KTMPFEPTPAIWEAILSGCRINGDMELGAYAA 624
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 202/647 (31%), Positives = 348/647 (53%), Gaps = 17/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNL-NNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFD 56
++MY K G A +F + + ++V WN ++ GF E + +L + V
Sbjct: 711 IDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKLV 770
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ +++ AL C E FG Q+H +VK GLD++ YV +L++MYS+ G + EA VF
Sbjct: 771 STSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFS 830
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +K WNA+++ Y ++ D G A+ M +K + D + ++ S C +
Sbjct: 831 CVVDKRLEIWNAMVAAYVEN-DNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYD 889
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
GK +H K + ++ + L++ YSKC DA VF+ M ++++++W ++IS
Sbjct: 890 YGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLC 949
Query: 235 ---NREDAVSLFKEMRLD--GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++A+ +F +M+ D + P+ +I+A + + G +HG IKT +
Sbjct: 950 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLN 1009
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + LI +Y++ + + KVF + I++WN++IS Y++N L +++ F ++
Sbjct: 1010 VFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLS 1069
Query: 350 ESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ P++ + SVL A+ + SL G+ H + +++G+ SD + +AL+DMY K G
Sbjct: 1070 QGIFPDSVSITSVLVAISSTA--SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFS 1127
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ +F + Q KS W +I HGD + ++ F E++ G PD +TFLS+++ C
Sbjct: 1128 KYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISAC 1187
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G + +G++ F+ M +DY IEP +HY+ MVD+LGR GRLEEA + +P S+
Sbjct: 1188 NHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSI 1247
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
LL A R H NVE+G A+ L++MEP +YV + NLY E G A L MK
Sbjct: 1248 WLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKE 1307
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
+G++K+ G SW +V DI + F SG ++ P EI+++ L S M
Sbjct: 1308 RGLQKQPGCSWIEVSDISNV--FFSGGSSSPIKAEIFKVLNRLKSNM 1352
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 271/546 (49%), Gaps = 37/546 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-----DIVSWNTVLSG---FEKSDDALSFALRMNLIG 52
+NMY K G D A+ +F+ + D+ N+++ G F + + + RM ++G
Sbjct: 603 VNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLG 662
Query: 53 VVFDAVTYSTALSFCLDHEGFLF--GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
V DA + S +S F G Q+H +++ LD + ++ ALI MY ++G +
Sbjct: 663 VRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTD 722
Query: 111 ARRVFDEMPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASA 168
A RVF E+ +K +V WN ++ G+ G E+ L L + + ++L SFT A A
Sbjct: 723 AWRVFVEIEDKSNVVLWNVMIVGF--GGSEICESSLELYMLAKSNSVKLVSTSFTGALGA 780
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C +N G+QIH +KMG V L+S YSKC + G+A VF + D+ + W
Sbjct: 781 CSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIW 840
Query: 229 TTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
M++ E+ A+ LF MR V P+ T +I S+ L G+ +H K
Sbjct: 841 NAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFK 900
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
S P++ + L+T+Y++ D+ VF + +++++W +LISG +NG A++
Sbjct: 901 RPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 960
Query: 344 FFGVIKES----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
FG +K+ KP++ SV+NA E +S G + H +IK G + VGS+L+
Sbjct: 961 -FGDMKDDDDSLKPDSDIMTSVINACAGLEALSF--GLQVHGSMIKTGQVLNVFVGSSLI 1017
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
D+Y K G + +VF + ++ AW ++IS +R+ E + F M ++G+ PDS+
Sbjct: 1018 DLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSV 1077
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
+ SVL + KG+ L L+ D H++ + ++DM + G + AE
Sbjct: 1078 SITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLK------NALIDMYVKCGFSKYAE 1131
Query: 515 ELVGQI 520
+ ++
Sbjct: 1132 NIFKKM 1137
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 207/444 (46%), Gaps = 19/444 (4%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD-- 116
T+ + L C G +H I+ G + ++ +L+ MY + G L A +VFD
Sbjct: 563 TFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 622
Query: 117 ---EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
+ +D N+++ GY + + E + M+ G+R D S + S E
Sbjct: 623 SQSGVSARDVTVCNSMIDGYFKFRRFK-EGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEG 681
Query: 174 NL--ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTT 230
N E GKQIHG ++ + L+ Y K ++ DA +VF + D+ NV+ W
Sbjct: 682 NFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNV 741
Query: 231 MI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MI S E ++ L+ + + V +F G + A S GR IH +K
Sbjct: 742 MIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMG 801
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF- 344
++P V L++MY++ + ++E VF + + + WNA+++ Y +N +A++ F
Sbjct: 802 LDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFG 861
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
F K P+++T +V++ +G+ H+ + K + S P + SALL +Y K
Sbjct: 862 FMRQKSVLPDSFTLSNVISCCSMFG--LYDYGKSVHAELFKRPIQSTPAIESALLTLYSK 919
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM--ENKGVRPDSITFL 462
G ++ VF +EK AW ++IS L ++G ++ + F +M ++ ++PDS
Sbjct: 920 CGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMT 979
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLK 486
SV+ C + G + SM+K
Sbjct: 980 SVINACAGLEALSFGLQVHGSMIK 1003
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 175/362 (48%), Gaps = 17/362 (4%)
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF--- 217
+F S AC NL GK IHG I +G+ + L++ Y KC A +VF
Sbjct: 563 TFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 622
Query: 218 --RRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISI-GN 269
+ R+V +MI ++ V F+ M + GV P+ + ++ + GN
Sbjct: 623 SQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGN 682
Query: 270 LVKE-GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE-IISWNAL 327
+E G+ IHG ++ + + + LI MY +F D+ +VF E+ + ++ WN +
Sbjct: 683 FRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVM 742
Query: 328 ISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
I G+ + + ++++ + S K + +F L A +E+ + G++ H ++K+
Sbjct: 743 IVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAF--GRQIHCDVVKM 800
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
GLD+DP V ++LL MY K G + E++ VF+ +K W A+++A + + S + F
Sbjct: 801 GLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELF 860
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
M K V PDS T +V++ C G+ G+ + + K I+ +P S ++ + +
Sbjct: 861 GFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKR-PIQSTPAIESALLTLYSK 919
Query: 507 VG 508
G
Sbjct: 920 CG 921
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 16/271 (5%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE- 315
TF L+ A S + G+ IHG I + +P + L+ MY + + + +VFD
Sbjct: 563 TFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 622
Query: 316 ----LSCREIISWNALISGYAQ-----NGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVG 366
+S R++ N++I GY + G+ GV +P+A++ V++ +
Sbjct: 623 SQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGV----RPDAFSLSIVVSVLC 678
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA- 425
+ + G++ H ++++ LD D + +AL+DMY K G ++ RVF E ++KS
Sbjct: 679 KEGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVL 738
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W +I ES + + ++ V+ S +F L C ++ GR + ++
Sbjct: 739 WNVMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVV 798
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
K ++ P + ++ M + G + EAE +
Sbjct: 799 K-MGLDNDPYVSTSLLSMYSKCGMVGEAETV 828
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 204/694 (29%), Positives = 350/694 (50%), Gaps = 80/694 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIG-VVFD 56
MN Y K G A +F + D+ SWNT++SG+ +S DA+ + M G + +
Sbjct: 102 MNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPN 161
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR--- 113
A T+ A+ C LQL L+ KFG + V ++ M+ R G + A +
Sbjct: 162 AFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFS 221
Query: 114 ----------------------------VFDEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
+F+ MP +D VSWN ++S +Q G EA+
Sbjct: 222 QIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGR-AREALS 280
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
++M +G+RLD ++TS+ +AC +L GKQ+H I+ V + ++ Y+
Sbjct: 281 VAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYA 340
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIG 260
KC +A +VF + DRN +SWT +I + +++ LF +MR + + +
Sbjct: 341 KCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALAT 400
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
+I S + R +H L +K+ + N LI+MYA+ ++Q++E +F + R+
Sbjct: 401 IISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERD 460
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAV---GAAED------- 370
I+SW +++ Y+Q G ++ + FF + S N T+ ++L A GA ED
Sbjct: 461 IVSWTGMLTAYSQVG-NIGKAREFFDGM--STRNVITWNAMLGAYIQHGAEEDGLKMYSA 517
Query: 371 --------------ISL----------KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++L K G + H +KVGL D V +A++ MY K G
Sbjct: 518 MLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCG 577
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I E++++F+ K +W A+I+ ++HG + + F +M KG +PD I++++VL+
Sbjct: 578 RISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLS 637
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G++ +G+ FD + +D+++ P +H+SCMVD+L R G L EA+ L+ ++P P
Sbjct: 638 SCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTA 697
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +LL AC+ HGN E+ E A L ++ SG Y+L++ +YA+ G A +RK M
Sbjct: 698 EVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLM 757
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPR 620
+ KG++K G+SW +V + +H F + D +HP+
Sbjct: 758 RDKGIKKNPGYSWMEVK--NKVHVFKAEDVSHPQ 789
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 212/469 (45%), Gaps = 45/469 (9%)
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
+ V N ++ Y++ G L +A +F MP +D SWN ++SGY Q G + ++A+ + +
Sbjct: 92 EPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRF-LDAMESFV 150
Query: 149 EMMRKGLRLDHV-SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
M R G L + +F A +CG E+ Q+ G+ K G+ V ++ + +C
Sbjct: 151 SMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRC 210
Query: 208 EVTGDANK-------------------------------VFRRMHDRNVISWTTMISM-- 234
A+K +F M +R+V+SW M+S
Sbjct: 211 GAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALS 270
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+A+S+ +M GV + T+ + A + + + G+ +H I++ +P
Sbjct: 271 QSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPY 330
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE- 350
V + ++ +YA+ +++ +VF L R +SW LI G+ Q G +++ F + E
Sbjct: 331 VASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAEL 390
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + ++++ D+ L ++ HS +K G ++ ++L+ MY K G++
Sbjct: 391 MTVDQFALATIISGCSNRMDMCL--ARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQN 448
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F+ +E+ +WT +++A ++ G+ F M + V IT+ ++L +
Sbjct: 449 AESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNV----ITWNAMLGAYIQ 504
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
+G G ++ +ML + + P Y + +G + +++ G
Sbjct: 505 HGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGH 553
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 144/298 (48%), Gaps = 49/298 (16%)
Query: 261 LIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
L+HA +S G L ++ G + N ++ N ++ YA+ S+ D+E++F + R
Sbjct: 69 LLHAYLSCGALPDARGLLRGDITEPNVITH----NIMMNGYAKLGSLSDAEELFGRMPRR 124
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAA--EDISLKH 375
++ SWN L+SGY Q+G L A+++F + + +S PNA+TFG + + GA +++L+
Sbjct: 125 DVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQ- 183
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI-FESQR--------------------- 413
+ K G DP V + ++DM+ + G++ F S++
Sbjct: 184 ---LLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAK 240
Query: 414 ---------VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
+F E+ +W ++SAL++ G ++ +M N+GVR DS T+ S
Sbjct: 241 SYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSS 300
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
LT C + + G+ L +++ P D Y S MV++ + G +EA + +
Sbjct: 301 LTACAKLSSLGWGKQLHAQVIRSL---PCIDPYVASAMVELYAKCGCFKEARRVFSSL 355
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 205/652 (31%), Positives = 354/652 (54%), Gaps = 32/652 (4%)
Query: 4 YCKSGQFD--KALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIG-VVFDA 57
YC+ G D +A + + + + VS+N ++ + + ++++L L + V D
Sbjct: 55 YCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADR 114
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY+ AL+ C G +H+L V GL V+V N+L++MY+R G + EARRVFD
Sbjct: 115 FTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDV 174
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASAC--GHEKN 174
+D VSWN+++SGY + G + E +L + +MR+ + L+ + S C G
Sbjct: 175 TEERDDVSWNSLVSGYLRVGAH--EEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSV 232
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
+ + +HG +K G T + + + ++ Y+K +A +F+ + D NV+ + MI+
Sbjct: 233 RGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAG 292
Query: 234 -------MNRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
+++E +A+SL+ E++ G+ P + TF +I A ++ ++ G+ IHG +K
Sbjct: 293 LCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLK 352
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL---SLAA 340
F + + + LI +Y M+D + F + +++++W A+ISG QN L +LA
Sbjct: 353 HCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALAL 412
Query: 341 VQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
GV KP+ +T SV+NA + + + G++ K G D +G++ +
Sbjct: 413 FHELLGV--GLKPDPFTISSVMNACASLAVV--RTGEQMQCFATKSGFDRFTAMGNSCIH 468
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY + G++ + + F E + +W+AIIS+ A+HG + F EM V P+ IT
Sbjct: 469 MYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEIT 528
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
FL VLT C G++ +G ++ M +Y + P+ H +C+VD+LGR GRL +AE +
Sbjct: 529 FLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDS 588
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVA 580
V QSLLG+CRIH ++E G+ +AD +M+++PA SG YV + N+Y + G+ + +
Sbjct: 589 IFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGS 648
Query: 581 ILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY-RMAECL 631
+R MK +GV+KE G SW ++ G+H F +GD +HP IY ++AE L
Sbjct: 649 KIRDLMKERGVKKEPGLSWIELR--SGIHSFVAGDKSHPECNAIYTKLAEML 698
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 235/462 (50%), Gaps = 28/462 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY + G +A +F+ D VSWN+++SG+ + ++ L M + ++
Sbjct: 156 VSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNS 215
Query: 58 VTYSTALSFCLDHEGFLFGL--QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ + C +G + G+ +H +VK GLD+++++ +A++ MY++ G L EA +F
Sbjct: 216 FALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALF 275
Query: 116 DEMPNKDSVSWNAILSGYTQD-----GDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
+ + + V +NA+++G +D + EA+ E+ +G+ +F+S AC
Sbjct: 276 KSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACN 335
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
++E GKQIHG +K + +G+ L+ Y D + FR + ++V++WT
Sbjct: 336 LAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTA 395
Query: 231 MIS---MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MIS N E A++LF E+ G+ P+ T +++A + +V+ G + K+
Sbjct: 396 MISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSG 455
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F ++ N I MYAR +++ + + F E+ +++SW+A+IS +AQ+G + A+Q FF
Sbjct: 456 FDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQ-FF 514
Query: 346 GVIKESK--PNAYTFGSVLNAV--GAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALL 399
+ +K PN TF VL A G D L++ + I+K+ P V + ++
Sbjct: 515 NEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYE-----IMKMEYGLCPTVKHCTCVV 569
Query: 400 DMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYE 440
D+ G+ G + +++ ++ E W +++ + H D E
Sbjct: 570 DLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDME 611
>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 205/608 (33%), Positives = 310/608 (50%), Gaps = 20/608 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVL----SGFEKSDDALSFALRMNLIGVVFDAV 58
+YC G+ A + + P VS++ L +G +AL+ M FD +
Sbjct: 54 VYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMR----AFDHL 109
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ A C G +H + G + YV NALI+MY G + A VF M
Sbjct: 110 TFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAM 169
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
N+ VSWNA+++G ++G Y A+ EM G+ +D + S AC K+L G
Sbjct: 170 RNRTVVSWNAVIAGCVKNG-YAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTG 228
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMIS---M 234
+ +H + G G +V+V N L+ Y KC DA +VF HD++V+SWT MI +
Sbjct: 229 RAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVL 288
Query: 235 NRE--DAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N +A+SL +M + G PN VT + L+ A + K + H LCI+ S+ +
Sbjct: 289 NDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIA 348
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V LI YAR M+ + S R +WNA +SGY +G A++ F +I ES
Sbjct: 349 VETALIDAYARCGKMKLMRLTLERGSWRAE-TWNAALSGYTVSGREKKAIELFKRMIAES 407
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P++ T S+L A AE LK G+ H ++ +G + + L+D+Y K G +
Sbjct: 408 VRPDSATMASILPAY--AESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDA 465
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ +F EK AWT II+ + HG + + + M G +P+++T ++L C
Sbjct: 466 AWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSH 525
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
GMI +G +F M + + P+ +HYSC+VDMLGR GR+EEA L+ +P P SV
Sbjct: 526 AGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWG 585
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGAC +H NVE GE A L +++P +GSYVL+ N+YA W V +R+ M +G
Sbjct: 586 ALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERG 645
Query: 591 VRKEVGFS 598
+ KE G S
Sbjct: 646 LLKEPGSS 653
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 230/506 (45%), Gaps = 29/506 (5%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSW-NAILSGYTQDGDYGVEAILALIEMMRKG 154
+ L +Y GR A + +MP VS+ N++L YT G + LA+ MR
Sbjct: 49 HPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCH--REALAVYSAMRA- 105
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
DH++F AA AC + G+ +H ++ G+G V N L+S Y C G A
Sbjct: 106 --FDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAE 163
Query: 215 KVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN 269
VF M +R V+SW +I+ E A+ +F EM DGV + T + ++ A +
Sbjct: 164 AVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAK 223
Query: 270 LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC-REIISWNALI 328
+ GR +H L +V N LI MY + S++D+ +VFD ++++SW A+I
Sbjct: 224 DLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMI 283
Query: 329 SGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
Y N + A+ ++ PN T +L+A + S KH + H+ I++
Sbjct: 284 GAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMP--SGKHAKCTHALCIRL 341
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
GL SD V +AL+D Y + G + + ++E W A +S G + + F
Sbjct: 342 GLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE-TWNAALSGYTVSGREKKAIELF 400
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
K M + VRPDS T S+L + + +G+++ +L + S + + ++D+ +
Sbjct: 401 KRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLR-STEIATGLIDVYSK 459
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLM 566
G L+ A L +P + +++ IHG+ + D + +E G + V +
Sbjct: 460 AGDLDAAWALFQWLP-EKDVVAWTTIIAGYSIHGHARTAILLYDRM--VESGGKPNTVTI 516
Query: 567 SNLYAEKGDWEMVAILRKGMKSKGVR 592
+ L + A GM +G++
Sbjct: 517 ATL--------LYACSHAGMIDEGIK 534
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 210/458 (45%), Gaps = 27/458 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY G A +F + N +VSWN V++G K ++ AL M GV D
Sbjct: 150 ISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDR 209
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C + G +H L+ GL V V NALI MY + L +ARRVFD
Sbjct: 210 ATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDH 269
Query: 118 MP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH-VSFTSAASACGHEKNL 175
+KD VSW A++ Y + D EAI +M+ G + V+ SAC +
Sbjct: 270 CKHDKDVVSWTAMIGAYVLN-DRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSG 328
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT----- 230
+ K H + I++G + ++V L+ Y++C K+ R +R SW
Sbjct: 329 KHAKCTHALCIRLGLKSDIAVETALIDAYARC----GKMKLMRLTLERG--SWRAETWNA 382
Query: 231 -----MISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+S + A+ LFK M + V P+ T ++ A + +KEG+ IH +
Sbjct: 383 ALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLG 442
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
FL + LI +Y++ + + +F L +++++W +I+GY+ +G + A+ +
Sbjct: 443 FLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYD 502
Query: 346 GVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYG 403
+++ KPN T ++L A A I G + + V GL + S L+DM G
Sbjct: 503 RMVESGGKPNTVTIATLLYACSHAGMID--EGIKVFKDMRNVHGLMPNGEHYSCLVDMLG 560
Query: 404 KRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ G I E+ R+ + E S W A++ A H + E
Sbjct: 561 RAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVE 598
>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 197/596 (33%), Positives = 321/596 (53%), Gaps = 24/596 (4%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
GV T+ L C +LHS I+ G + V+V AL+ +YS+ A
Sbjct: 23 GVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSA 82
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACG 170
R VFD+MP K VSWN+I+S + +D + ++ +++ M+ GL L +FT ++C
Sbjct: 83 RLVFDQMPIKSLVSWNSIISAHCRD--FHIDQSFGILKQMQLLGLELSSATFTGFLASC- 139
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+L G IHG K+G H+ + N +MS Y + A VF +H ++++SWT
Sbjct: 140 ---SLPQGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTI 196
Query: 231 MI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
++ + + ++F +MR V P+ + F+ LI + + ++H L +K+
Sbjct: 197 ILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSG 256
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F + + N L+ MYA+ + + + +VFD + + + W ++ISGYAQ G A+ F
Sbjct: 257 FDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFN 316
Query: 346 GVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+++ S+PN T +VL+A AE SL+ G+ +I+ GL SD V ++L+ M+ K
Sbjct: 317 MLLRTASRPNELTLATVLSA--CAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCK 374
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK-GVRPDSITFLS 463
GSI ++Q +F K W+A+I+ A HG + +N F +M+N+ G++PD+I + S
Sbjct: 375 CGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTS 434
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL C +G+I G F SM KD+ IEPS HYSC+VD+LGR G +E A + ++P
Sbjct: 435 VLLACSHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVL 494
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
V L AC H N+E+GE A L +EP +G++VLM+NLY G W+ A R
Sbjct: 495 VQARVWAPFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAAKAR 554
Query: 584 KGMKSKGVRKEVGFSWADVGDIDG-LHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+ ++G+ KE G W+ + +IDG +H ++ +H S +I+ L EM+ L
Sbjct: 555 SIINARGLVKEPG--WSQI-EIDGAVHVLAAEGQSHLESIDIHE----LCPEMRIL 603
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 219/455 (48%), Gaps = 25/455 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K F A +F+ + +VSWN+++S + D + +M L+G+ +
Sbjct: 70 VDVYSKCCCFHSARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSS 129
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L+ C GL +H I K GLD + + N++++MY R ++ A VF
Sbjct: 130 ATFTGFLASC----SLPQGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYT 185
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
+ K VSW IL GY GD V + A+ MR + + D + F + S C NL
Sbjct: 186 LHQKSIVSWTIILGGYLSAGD--VAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLL 243
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
L +H + +K G+ + N+L++ Y+KC+ A +VF +H+++V WT+MIS
Sbjct: 244 LAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYA 303
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +A+ LF + PN++T ++ A + ++ G I + S+
Sbjct: 304 QFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLR 363
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V LI M+ + S++ ++ +F+ + +++ W+A+I+GYA +G+ A+ F + E
Sbjct: 364 VQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEV 423
Query: 352 --KPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
KP+A + SVL A G ED LK+ + G++ S L+D+ G+ G
Sbjct: 424 GIKPDAIVYTSVLLACSHSGLIED-GLKYFRSMQK---DFGIEPSIQHYSCLVDLLGRAG 479
Query: 407 SIFESQRVFNETQEKSEF-AWTAIISALARHGDYE 440
+ + R E + W +SA H + E
Sbjct: 480 YVELALRTIQEMPVLVQARVWAPFLSACYTHHNLE 514
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 199/408 (48%), Gaps = 24/408 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD-ALSFAL--RMNLIGVVFDA 57
M+MY + Q D AL +F L+ IVSW +L G+ + D A FA+ +M V D+
Sbjct: 167 MSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDS 226
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + +S C L + +HSL++K G D + + N L+ MY++ LV ARRVFD
Sbjct: 227 IVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDA 286
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ K W +++SGY Q G Y EA+ ++R R + ++ + SAC +L +
Sbjct: 287 VHEKSVFLWTSMISGYAQFG-YPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRM 345
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G++I + G G+ + V L+ + KC A +F R+ ++++ W+ MI+
Sbjct: 346 GEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAV 405
Query: 234 --MNREDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
M +E A++LF +M+ + G+ P+ + + ++ A S L+++G + + ++ +F EP
Sbjct: 406 HGMGKE-ALNLFHKMQNEVGIKPDAIVYTSVLLACSHSGLIEDG-LKYFRSMQKDFGIEP 463
Query: 291 SV--CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISG-YAQNGLSLA--AVQAF 344
S+ +CL+ + R ++ + + E+ + W +S Y + L L A +
Sbjct: 464 SIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVWAPFLSACYTHHNLELGEFAAKNL 523
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
F + S N ++ ++G K + S I GL +P
Sbjct: 524 FDLEPRSTGNFVLMTNLYTSMG-----KWKEAAKARSIINARGLVKEP 566
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 182/607 (29%), Positives = 334/607 (55%), Gaps = 26/607 (4%)
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
+G ++ Y L C+D +H IVK G +++V L+ +YS+ G +
Sbjct: 52 LGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMES 111
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A +VFD +P ++ +W +L+GY Q+ + + A+ I+M+ G + + +AC
Sbjct: 112 AHKVFDNLPRRNVNAWTTLLTGYVQNS-HPLLALQLFIKMLEAGAYPSNYTLGIVLNACS 170
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+++E GKQ+H IK S+GN L S YSK A K F+ + +++VISWT+
Sbjct: 171 SLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTS 230
Query: 231 MISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+IS ++ ++S F +M DG+ PN+ T ++ A + + G IH L IK
Sbjct: 231 VISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLG 290
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ------------ 333
+ S + N ++ +Y + + +++K+F+ + +++WNA+I+G+A+
Sbjct: 291 YGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAH 350
Query: 334 --NGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
+LA Q + KP+ +TF SVL+ + ++L+ G++ H IIK G+ +D
Sbjct: 351 KSGSTALAMFQKLYR--SGMKPDLFTFSSVLSV--CSNLVALEQGEQIHGQIIKSGVLAD 406
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+VG+AL+ MY K GSI ++ + F E ++ +WT++I+ ARHG + + F++M
Sbjct: 407 VVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRL 466
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
G++P+ +TF+ VL+ C G+ + + F+ M K Y+I+P DH++C++DM R+GR+E
Sbjct: 467 VGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVE 526
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
EA ++V ++ P ++ L+ CR HG ++G A+ L+K++P +YV + N++
Sbjct: 527 EAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHI 586
Query: 572 EKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
G W+ V+ +RK MK + V K +SW + + ++ F D +H +S E+Y++ E +
Sbjct: 587 SAGRWKDVSKVRKLMKEEKVGKLKDWSWISIK--EKVYSFKPNDKSHCQSLEMYKLLETV 644
Query: 632 GSEMKYL 638
+E+K L
Sbjct: 645 LNEVKAL 651
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 265/507 (52%), Gaps = 33/507 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+N+Y K G + A +F+NL ++ +W T+L+G+ ++ AL ++M G
Sbjct: 100 VNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSN 159
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T L+ C + FG Q+H+ ++K+ +D + +GN+L + YS++ RL A + F
Sbjct: 160 YTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKI 219
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD +SW +++S +G ++ ++M+ G++ + + TS SAC L+L
Sbjct: 220 IKEKDVISWTSVISSCCDNGQ-AARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDL 278
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G QIH +SIK+GYG+ + + N +M Y KC +A K+F M N+++W MI+
Sbjct: 279 GAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAK 338
Query: 234 ---MNRED---------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+ +D A+++F+++ G+ P+ TF ++ S +++G IHG
Sbjct: 339 MMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQI 398
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IK+ L++ V L++MY + S+ + K F E+ R +ISW ++I+G+A++GLS A+
Sbjct: 399 IKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQAL 458
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SAL 398
Q F + + KPN TF VL+A A L + +++ + P++ + L
Sbjct: 459 QLFEDMRLVGIKPNQVTFVGVLSACSHA---GLADEALYYFELMQKQYNIKPVMDHFACL 515
Query: 399 LDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
+DMY + G + E+ V ++ E +E W+ +I+ HG +S + + + ++P
Sbjct: 516 IDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG--KSDLGFYAAEQLLKLKPK 573
Query: 458 SI-TFLSVLTV---CGRNGMIHKGRHL 480
+ T++S+L + GR + K R L
Sbjct: 574 DVETYVSLLNMHISAGRWKDVSKVRKL 600
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 201/409 (49%), Gaps = 21/409 (5%)
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
E + G R++ + C + IHG +K G+ + V L++ YSKC
Sbjct: 48 EEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCG 107
Query: 209 VTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIH 263
V A+KVF + RNV +WTT+++ ++ A+ LF +M G P++ T +++
Sbjct: 108 VMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLN 167
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
A S ++ G+ +H IK + + S+ N L + Y++F ++ + K F + +++IS
Sbjct: 168 ACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVIS 227
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
W ++IS NG + ++ F ++ + KPN YT SVL+A ++L G + HS
Sbjct: 228 WTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVM--LTLDLGAQIHSL 285
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA---------- 432
IK+G S ++ ++++ +Y K G + E+Q++F + + W A+I+
Sbjct: 286 SIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAED 345
Query: 433 -LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
+A H + + F+++ G++PD TF SVL+VC + +G + ++K +
Sbjct: 346 DVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKS-GVL 404
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
+ +V M + G +++A + ++P +S + G R HG
Sbjct: 405 ADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFAR-HG 452
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 204/644 (31%), Positives = 355/644 (55%), Gaps = 73/644 (11%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTA 63
Y K+ QFD+A +F+ + D+VSWN++L+G+ ++ + +R+ L F+ +
Sbjct: 150 YAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGE-----MRLGL--QFFEEMAERDV 202
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNAL--ITM---YSRWGRLVEARRVFDEM 118
+S+ L +GF+ ++ L + ++ N + +TM ++R+G++ EARR+FD+M
Sbjct: 203 VSWNLMVDGFV---EVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQM 259
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P ++ V+WNA+++ Y Q+ EAI +EM K + +S+T+ + L+
Sbjct: 260 PIRNVVAWNAMIAAYVQNCHVD-EAISLFMEMPEK----NSISWTTVINGYVRMGKLDEA 314
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+Q+ +M Y +V+ ++S Y + + DA ++F ++ R+V+ W TMI+
Sbjct: 315 RQLLN---QMPY-RNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQC 370
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
++A+ LFK+M +K + +S
Sbjct: 371 GRMDEALHLFKQM-----------------------------------VKKDIVS----W 391
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SK 352
N ++ YA+ M + K+F+E+ + I+SWN+LISG QNG L A+++F + E K
Sbjct: 392 NTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQK 451
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ TF L++ A +L+ G++ H ++K G +D V +AL+ MY K GSI ++
Sbjct: 452 PDQSTFACGLSS--CAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAE 509
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F + +W ++I+A A +G+ + F +ME +GV PD +TF+ +L+ C G
Sbjct: 510 LLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVG 569
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+I +G LF M++ Y+IEP +HY+CMVD+LGR GRLEEA +LV + + +L
Sbjct: 570 LIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGAL 629
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
LGACRIHGN+E+ + A+ L++ EP + +YVL+SN+ AE G W+ VA +R+ MK KG
Sbjct: 630 LGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAE 689
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
K+ G+SW ++ + +H F S D HPR+ E+ + L + M+
Sbjct: 690 KQPGWSWIELQ--NRVHAFLSEDPAHPRAVELCHILRSLTAHMR 731
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 175/324 (54%), Gaps = 30/324 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+N Y + G+ D+A + N + ++ + ++SG+ ++ DDA N I + D
Sbjct: 302 INGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQI---FNQISIR-DV 357
Query: 58 VTYSTAL---SFC--LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
V ++T + S C +D LF + IV + N ++ Y++ G++ A
Sbjct: 358 VCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSW---------NTMVASYAQVGQMDAAI 408
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
++F+EM K+ VSWN+++SG TQ+G Y ++A+ + + M +G + D +F S+C H
Sbjct: 409 KIFEEMKEKNIVSWNSLISGLTQNGSY-LDALKSFMLMGHEGQKPDQSTFACGLSSCAHL 467
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
L++GKQ+H + +K GY T + V N L++ Y+KC A +F+ + +V+SW ++I
Sbjct: 468 AALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLI 527
Query: 233 SM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ N +A+ LF +M ++GV P++VTF+G++ A S L+ +G + C+ +
Sbjct: 528 AAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFK-CMVQAYN 586
Query: 288 SEPSVCN--CLITMYARFESMQDS 309
EP + C++ + R ++++
Sbjct: 587 IEPLAEHYACMVDLLGRAGRLEEA 610
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/496 (19%), Positives = 236/496 (47%), Gaps = 59/496 (11%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
N++I+ +++ GR+ +AR++FD MP ++ VSWN++++ Y + VE L + M
Sbjct: 50 NSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDR--VEEARQLFDKMPTR- 106
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
D S+T + + +N EL K + ++ + Y + N +++ Y+K +A +
Sbjct: 107 --DLYSWTLMITC--YTRNGELAKARNLFNL-LPYKWNPVCCNAMVAGYAKNRQFDEARR 161
Query: 216 VFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
+F M ++++SW +M++ + + F+EM V ++ G + +G+L
Sbjct: 162 LFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGF---VEVGDL 218
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITM--YARFESMQDSEKVFDELSCREIISWNALI 328
+ P+ + + + +ARF + ++ ++FD++ R +++WNA+I
Sbjct: 219 NSSWEFFEK-------IPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMI 271
Query: 329 SGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIK 385
+ Y QN A+ F ++ + N+ ++ +V+N +G ++ Q + ++
Sbjct: 272 AAYVQNCHVDEAISLF---MEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNV-- 326
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
+A++ Y + + +++++FN+ + W +I+ ++ G + ++
Sbjct: 327 -------AAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHL 379
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLG 505
FK+M V+ D +++ +++ + G + +F+ M K+ +I ++ ++ L
Sbjct: 380 FKQM----VKKDIVSWNTMVASYAQVGQMDAAIKIFEEM-KEKNIVS----WNSLISGLT 430
Query: 506 RVGRLEEAEE---LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGS 562
+ G +A + L+G P S L +C +++G+++ +MK +G +
Sbjct: 431 QNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMK---SGYAT 487
Query: 563 YVLMSN----LYAEKG 574
+ +SN +YA+ G
Sbjct: 488 DLFVSNALITMYAKCG 503
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 139/328 (42%), Gaps = 50/328 (15%)
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFK 244
+G++V N+ ++ K +A KVF+ M +N ++ +MIS + DA LF
Sbjct: 11 HGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFD 70
Query: 245 EMRLDGVCPNDVTFIGLIHAISI----------------------------GNLVKEGRM 276
M + + +H + G L K +
Sbjct: 71 GMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNL 130
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
+ L K N P CN ++ YA+ ++ ++FD + ++++SWN++++GY +NG
Sbjct: 131 FNLLPYKWN----PVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGE 186
Query: 337 SLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
+Q FF + E ++ L G E L I + + +
Sbjct: 187 MRLGLQ-FFEEMAERDVVSWN----LMVDGFVEVGDLNSSWEFFEKIP----NPNTVSWV 237
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
+L + + G I E++R+F++ ++ AW A+I+A ++ + ++ F EM K
Sbjct: 238 TMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEK---- 293
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+SI++ +V+ R G + + R L + M
Sbjct: 294 NSISWTTVINGYVRMGKLDEARQLLNQM 321
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 129/307 (42%), Gaps = 82/307 (26%)
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N IT + + ++ KVF ++ + ++ N++IS +A+NG A Q F G+ +
Sbjct: 19 NLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQR--- 75
Query: 354 NAYTFGSVLNA------VGAAEDISLKHGQR----------CHSHIIKVG---------- 387
N ++ S++ A V A + K R C++ ++
Sbjct: 76 NIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLP 135
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+P+ +A++ Y K E++R+F+ K +W ++++ R+G+ + F+
Sbjct: 136 YKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFE 195
Query: 448 EMENKGV---------------------------RPDSITFLSVLTVCGRNGMIHKGRHL 480
EM + V P++++++++L R G I + R L
Sbjct: 196 EMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRL 255
Query: 481 FDSM---------------LKDYHIEPS-------PDH----YSCMVDMLGRVGRLEEAE 514
FD M +++ H++ + P+ ++ +++ R+G+L+EA
Sbjct: 256 FDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEAR 315
Query: 515 ELVGQIP 521
+L+ Q+P
Sbjct: 316 QLLNQMP 322
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+ MY K G A +F ++++ D+VSWN++++ + +AL +M + GV D
Sbjct: 496 ITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDE 555
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT+ LS C H G + GL+L +V+ + ++ ++ + R GRL EA ++
Sbjct: 556 VTFVGILSAC-SHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLV 614
Query: 116 DEMP-NKDSVSWNAIL 130
M N ++ W A+L
Sbjct: 615 RGMKINANAGIWGALL 630
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 336/617 (54%), Gaps = 22/617 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRM-----NLIG 52
++MY K + +A +F+++ D VSWN++++G+ + +++A M N
Sbjct: 83 ISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKL 142
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
+V D T +T L C G +H VK G DS+++V + + MY + G L A
Sbjct: 143 LVSD-FTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAG 201
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
FD++ NKD V+WN +++GY Q+ Y EAI +M +G + + +F A
Sbjct: 202 LAFDQIENKDIVAWNTMITGYAQNC-YEEEAIELFYQMELEGFKPNDTTFCCVLKASTAM 260
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ +G+ H +K+G V V L+ YSK D + F M RN++S+ +I
Sbjct: 261 SDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALI 320
Query: 233 S----MNR-EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ M + E+A+ ++ +++ +G+ P+ TF+GL + S+ + V EG +H +K
Sbjct: 321 TGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLD 380
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S+ SV N ++ Y++ + + F+ ++ + W +ISG+AQNG A+ F +
Sbjct: 381 SDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKM 440
Query: 348 IKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
K K + ++ SV+ AV + +++ G+ H+H++K GLD VGSA++DMY K G
Sbjct: 441 RKFIDKTDEFSSSSVIKAVSSWA--AVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCG 498
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ ++Q+VF+ EK+ +W ++I+ A++G + + F+EM + G+ P ++TF+ +L
Sbjct: 499 MVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILF 558
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE--LVGQIPGGP 524
C G++ +GR+ ++ M+ +Y I PS +H +CMVD+LGR G LEEAE L P
Sbjct: 559 ACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEP 618
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
G + SLL AC +H N ++G R A + +EP S SY +SN+YA K W V+ +R
Sbjct: 619 G--IWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSRIRD 676
Query: 585 GMKSKGVRKEVGFSWAD 601
MK GV KE G SW +
Sbjct: 677 LMKDMGVEKEPGCSWIE 693
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 148/511 (28%), Positives = 268/511 (52%), Gaps = 17/511 (3%)
Query: 24 DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
++V W + ++ + D ALS L+M G+ +A+TYS +S C LH
Sbjct: 5 NVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLH 64
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
LI+K G ++++V + LI+MYS+ R+ EAR +FD+MP +D VSWN++++GY+Q G
Sbjct: 65 CLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRG-LN 123
Query: 141 VEAILALIEMMRK----GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
EA M+ L + + + ACG +GK +HG ++K+G+ + + V
Sbjct: 124 EEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFV 183
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGV 251
+ Y KC + A F ++ ++++++W TMI+ E+A+ LF +M L+G
Sbjct: 184 SGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGF 243
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
PND TF ++ A + + GR H +K + V L+ MY++F ++D E+
Sbjct: 244 KPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVER 303
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAED 370
F E+S R ++S+NALI+GY+ G A++ + + E +P+++TF + ++ +
Sbjct: 304 AFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSST 363
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
++ G + H H +K GLDSD VG+++++ Y K G + F + W II
Sbjct: 364 VA--EGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGII 421
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
S A++G+ E + QF +M + D + SV+ + +GRHL ++K +
Sbjct: 422 SGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKS-GL 480
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ + S ++DM + G +E+A+++ +P
Sbjct: 481 DCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP 511
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 200/642 (31%), Positives = 335/642 (52%), Gaps = 48/642 (7%)
Query: 29 NTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVK 85
N+++ G+ + +A+ +RM ++GV + T+ LS C F G+Q+H +VK
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVK 159
Query: 86 FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
GL+ +V++ N LI Y+ G + +VF+ M ++ VSW +++ GY + GD EA+
Sbjct: 160 MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYAR-GDRPKEAVS 218
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
EM+ G+R V+ SAC ++L++G+++ ++G + + N L+ Y
Sbjct: 219 LFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYM 278
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMIS------MNREDAVSLFKEMRLDGVCPNDVTFI 259
KC A ++F DRN++ + T++S + RE A+++ EM G P+ VT +
Sbjct: 279 KCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLARE-ALAILDEMLQQGPRPDRVTML 337
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
I A + + G++ HG I+ S+ N +I MY + + + +VFD +S +
Sbjct: 338 SAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNK 397
Query: 320 EIISWNALISGYAQNGLSLAAVQAF---------------FGVIKES------------- 351
++SWN+L +G+ +NG +A + F G++++S
Sbjct: 398 TVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQ 457
Query: 352 ----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
K + T + +A G L + H++I K G+ D + +AL+DM+ + G
Sbjct: 458 GEGIKADRVTMMGIASACGYLGAPEL--AKWVHTYIEKNGIPCDMRLNTALVDMFARCGD 515
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +VFN+ E+ AWTA I +A G+ E F +M +GV+PD + F+ VLT
Sbjct: 516 PQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTA 575
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G + +G H+F S+++D+ I P +HY CMVD+LGR G L EA +L+ +P P
Sbjct: 576 CSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDV 634
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V SLL ACR+H NVEM A+ + ++ P +G +VL+SN+YA G W VA +R ++
Sbjct: 635 VWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLR 694
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
KGVRK G S V + +H F+SGD +HP I M +
Sbjct: 695 EKGVRKVPGSSSVQVNGV--IHEFTSGDESHPEMTHIALMLQ 734
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 221/481 (45%), Gaps = 44/481 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++ Y + G D +F ++ ++VSW +++ G+ + D +A+S M G+ +
Sbjct: 173 IHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSS 232
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT +S C G ++ + I + GL + NAL+ MY + G + A+R+FDE
Sbjct: 233 VTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDE 292
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+++ V +N ILS Y + G EA+ L EM+++G R D V+ SA SA +L
Sbjct: 293 CVDRNLVLYNTILSNYARQG-LAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFY 351
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV---------------------------- 209
GK HG I+ G S+GNV++ Y KC
Sbjct: 352 GKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIR 411
Query: 210 TGD---ANKVFRRMHDRNVISWTTMIS--MNR---EDAVSLFKEMRLDGVCPNDVTFIGL 261
GD A +VF ++ +RN + W TMIS + + EDA+ LF+EM+ +G+ + VT +G+
Sbjct: 412 NGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGI 471
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
A + + +H K + + L+ M+AR Q + +VF++++ R++
Sbjct: 472 ASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDV 531
Query: 322 ISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
+W A I A G A F +I+ KP+ F VL A + + G
Sbjct: 532 SAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQV--EQGLHIF 589
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGDY 439
S + G+ ++D+ G+ G + E+ + E ++ W ++++A H +
Sbjct: 590 SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNV 649
Query: 440 E 440
E
Sbjct: 650 E 650
>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
Length = 667
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 205/608 (33%), Positives = 309/608 (50%), Gaps = 20/608 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVL----SGFEKSDDALSFALRMNLIGVVFDAV 58
+YC G+ A + + P VS++ L +G +AL+ M FD +
Sbjct: 54 VYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMR----AFDHL 109
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ A C G +H + G + YV NALI+MY G + A VF M
Sbjct: 110 TFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAM 169
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
N+ VSWNA+++G ++G Y A+ EM G+ +D + S AC K+L G
Sbjct: 170 RNRTVVSWNAVIAGCVKNG-YAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTG 228
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMIS---M 234
+ +H + G G +V+V N L+ Y KC DA +VF HD++V+SWT MI +
Sbjct: 229 RAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVL 288
Query: 235 NRE--DAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N +A+SL +M + G PN VT + L+ A + K + H LCI+ S+ +
Sbjct: 289 NDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIA 348
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V LI YAR M+ + S R +WNA +SGY +G A++ F +I ES
Sbjct: 349 VETALIDAYARCGKMKLMRLTLERGSWRAE-TWNAALSGYTVSGREKKAIELFKRMIAES 407
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P++ T S+L A AE LK G+ H ++ +G + + L+D+Y K G +
Sbjct: 408 VRPDSATMASILPAY--AESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDA 465
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ +F EK AWT II+ HG + + + M G +P+++T ++L C
Sbjct: 466 AWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSH 525
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
GMI +G +F M + + P+ +HYSC+VDMLGR GR+EEA L+ +P P SV
Sbjct: 526 AGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWG 585
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGAC +H NVE GE A L +++P +GSYVL+ N+YA W V +R+ M +G
Sbjct: 586 ALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERG 645
Query: 591 VRKEVGFS 598
+ KE G S
Sbjct: 646 LLKEPGSS 653
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 222/483 (45%), Gaps = 21/483 (4%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSW-NAILSGYTQDGDYGVEAILALIEMMRKG 154
+ L +Y GR A + +MP VS+ N++L YT G + LA+ MR
Sbjct: 49 HPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCH--REALAVYSAMRA- 105
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
DH++F AA AC + G+ +H ++ G+G V N L+S Y C G A
Sbjct: 106 --FDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAE 163
Query: 215 KVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN 269
VF M +R V+SW +I+ E A+ +F EM DGV + T + ++ A +
Sbjct: 164 AVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAK 223
Query: 270 LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC-REIISWNALI 328
+ GR +H L +V N LI MY + S++D+ +VFD ++++SW A+I
Sbjct: 224 DLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMI 283
Query: 329 SGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
Y N + A+ ++ PN T +L+A + S KH + H+ I++
Sbjct: 284 GAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMP--SGKHAKCTHALCIRL 341
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
GL SD V +AL+D Y + G + + ++E W A +S G + + F
Sbjct: 342 GLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE-TWNAALSGYTVSGREKKAIELF 400
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
K M + VRPDS T S+L + + +G+++ +L + S + + ++D+ +
Sbjct: 401 KRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLR-STEIATGLIDVYSK 459
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLM 566
G L+ A L +P + +++ IHG+ + D + +E G + V +
Sbjct: 460 AGDLDAAWALFQWLP-EKDVVAWTTIIAGYGIHGHARTAILLYDRM--VESGGKPNTVTI 516
Query: 567 SNL 569
+ L
Sbjct: 517 ATL 519
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 209/458 (45%), Gaps = 27/458 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY G A +F + N +VSWN V++G K ++ AL M GV D
Sbjct: 150 ISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDR 209
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C + G +H L+ GL V V NALI MY + L +ARRVFD
Sbjct: 210 ATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDH 269
Query: 118 MP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH-VSFTSAASACGHEKNL 175
+KD VSW A++ Y + D EAI +M+ G + V+ SAC +
Sbjct: 270 CKHDKDVVSWTAMIGAYVLN-DRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSG 328
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT----- 230
+ K H + I++G + ++V L+ Y++C K+ R +R SW
Sbjct: 329 KHAKCTHALCIRLGLKSDIAVETALIDAYARC----GKMKLMRLTLERG--SWRAETWNA 382
Query: 231 -----MISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+S + A+ LFK M + V P+ T ++ A + +KEG+ IH +
Sbjct: 383 ALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLG 442
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
FL + LI +Y++ + + +F L +++++W +I+GY +G + A+ +
Sbjct: 443 FLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYD 502
Query: 346 GVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYG 403
+++ KPN T ++L A A I G + + V GL + S L+DM G
Sbjct: 503 RMVESGGKPNTVTIATLLYACSHAGMID--EGIKVFKDMRNVHGLMPNGEHYSCLVDMLG 560
Query: 404 KRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ G I E+ R+ + E S W A++ A H + E
Sbjct: 561 RAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVE 598
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/607 (29%), Positives = 334/607 (55%), Gaps = 26/607 (4%)
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
+G ++ Y L C+D +H IVK G +++V L+ +YS+ G +
Sbjct: 58 LGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMES 117
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A +VFD +P ++ +W +L+GY Q+ + + A+ I+M+ G + + +AC
Sbjct: 118 AHKVFDNLPRRNVNAWTTLLTGYVQNS-HPLLALQLFIKMLEAGAYPSNYTLGIVLNACS 176
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+++E GKQ+H IK S+GN L S YSK A K F+ + +++VISWT+
Sbjct: 177 SLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTS 236
Query: 231 MISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+IS ++ ++S F +M DG+ PN+ T ++ A + + G IH L IK
Sbjct: 237 VISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLG 296
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ------------ 333
+ S + N ++ +Y + + +++K+F+ + +++WNA+I+G+A+
Sbjct: 297 YGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAH 356
Query: 334 --NGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
+LA Q + KP+ +TF SVL+ + ++L+ G++ H IIK G+ +D
Sbjct: 357 KSGSTALAMFQKLYR--SGMKPDLFTFSSVLSV--CSNLVALEQGEQIHGQIIKSGVLAD 412
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+VG+AL+ MY K GSI ++ + F E ++ +WT++I+ ARHG + + F++M
Sbjct: 413 VVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRL 472
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
G++P+ +TF+ VL+ C G+ + + F+ M K Y+I+P DH++C++DM R+GR+E
Sbjct: 473 VGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVE 532
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
EA ++V ++ P ++ L+ CR HG ++G A+ L+K++P +YV + N++
Sbjct: 533 EAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHI 592
Query: 572 EKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
G W+ V+ +RK MK + V K +SW + + ++ F D +H +S E+Y++ E +
Sbjct: 593 SAGRWKDVSKVRKLMKEEKVGKLKDWSWISIK--EKVYSFKPNDKSHCQSLEMYKLLETV 650
Query: 632 GSEMKYL 638
+E+K L
Sbjct: 651 LNEVKAL 657
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 265/507 (52%), Gaps = 33/507 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+N+Y K G + A +F+NL ++ +W T+L+G+ ++ AL ++M G
Sbjct: 106 VNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSN 165
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T L+ C + FG Q+H+ ++K+ +D + +GN+L + YS++ RL A + F
Sbjct: 166 YTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKI 225
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD +SW +++S +G ++ ++M+ G++ + + TS SAC L+L
Sbjct: 226 IKEKDVISWTSVISSCCDNGQ-AARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDL 284
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G QIH +SIK+GYG+ + + N +M Y KC +A K+F M N+++W MI+
Sbjct: 285 GAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAK 344
Query: 234 ---MNRED---------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+ +D A+++F+++ G+ P+ TF ++ S +++G IHG
Sbjct: 345 MMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQI 404
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IK+ L++ V L++MY + S+ + K F E+ R +ISW ++I+G+A++GLS A+
Sbjct: 405 IKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQAL 464
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SAL 398
Q F + + KPN TF VL+A A L + +++ + P++ + L
Sbjct: 465 QLFEDMRLVGIKPNQVTFVGVLSACSHA---GLADEALYYFELMQKQYNIKPVMDHFACL 521
Query: 399 LDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
+DMY + G + E+ V ++ E +E W+ +I+ HG +S + + + ++P
Sbjct: 522 IDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG--KSDLGFYAAEQLLKLKPK 579
Query: 458 SI-TFLSVLTV---CGRNGMIHKGRHL 480
+ T++S+L + GR + K R L
Sbjct: 580 DVETYVSLLNMHISAGRWKDVSKVRKL 606
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 201/409 (49%), Gaps = 21/409 (5%)
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
E + G R++ + C + IHG +K G+ + V L++ YSKC
Sbjct: 54 EEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCG 113
Query: 209 VTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIH 263
V A+KVF + RNV +WTT+++ ++ A+ LF +M G P++ T +++
Sbjct: 114 VMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLN 173
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
A S ++ G+ +H IK + + S+ N L + Y++F ++ + K F + +++IS
Sbjct: 174 ACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVIS 233
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
W ++IS NG + ++ F ++ + KPN YT SVL+A ++L G + HS
Sbjct: 234 WTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVM--LTLDLGAQIHSL 291
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA---------- 432
IK+G S ++ ++++ +Y K G + E+Q++F + + W A+I+
Sbjct: 292 SIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAED 351
Query: 433 -LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
+A H + + F+++ G++PD TF SVL+VC + +G + ++K +
Sbjct: 352 DVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKS-GVL 410
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
+ +V M + G +++A + ++P +S + G R HG
Sbjct: 411 ADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFAR-HG 458
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 187/603 (31%), Positives = 321/603 (53%), Gaps = 18/603 (2%)
Query: 24 DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
D+VSWN+++S F + DA + M G + + + + C + FGL +H
Sbjct: 5 DVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIH 64
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
+L VK GL++ V + NAL+ MY ++G + + +VFD M ++ VSWN+ + + G YG
Sbjct: 65 ALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYG 124
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
+ + +M + ++ +S A + +LG+++HG SIK + V N L
Sbjct: 125 -DVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSL 183
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPND 255
+ Y+K A+ +F +M DRNV+SW MI+ +A L +M+ G CPN
Sbjct: 184 VDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNS 243
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
+T + ++ A + +K G+ IH I+ + + + N LI MY++ + + +F E
Sbjct: 244 ITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIF-E 302
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSV--LNAVGAAEDISL 373
S ++ +S+N LI GY+Q+ ++ F K+ + + +V + A+ A ++S+
Sbjct: 303 RSEKDDVSYNTLILGYSQSPWCFESLLLF----KQMRSVGIDYDAVSFMGALSACTNLSV 358
Query: 374 -KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
KHG+ H +++ L P + ++LLD+Y K G + + ++FN+ +K +W +I
Sbjct: 359 FKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILG 418
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
HG + F+ M+ G+ D +++++VL C G++ KG+ F M+ +IEP
Sbjct: 419 YGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEP 477
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
HY+CMVD+LGR G+L + E++ +P V +LLGACRIHGN+E+ + A+ L
Sbjct: 478 QQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHL 537
Query: 553 MKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFS 612
+++P SG Y LM N+YAE G W +RK MKS+ V+K +SW D + L F
Sbjct: 538 FELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQDQDGNKLQAFL 597
Query: 613 SGD 615
GD
Sbjct: 598 VGD 600
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 233/447 (52%), Gaps = 21/447 (4%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D VSWN+++S + +G + +A AL+ MMR G L+ S S ACG E+ +
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFH-DARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKF 59
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MN 235
G IH +++K+G T V++ N L+ Y K + +VF M ++N +SW + I +N
Sbjct: 60 GLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLN 119
Query: 236 R---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
D + +F++M V P +T L+ A+ GR +HG IK + V
Sbjct: 120 AGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFV 179
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ MYA+F S++ + +F+++ R ++SWNA+I+ QNG A +AF V K
Sbjct: 180 ANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNG---AETEAFRLVTDMQK 236
Query: 353 ----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
PN+ T +VL A A SLK G++ H+ I+ GL D + +AL+DMY K G +
Sbjct: 237 SGECPNSITLVNVLPA--CARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQL 294
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHG-DYESVMNQFKEMENKGVRPDSITFLSVLTV 467
++ +F E EK + ++ +I ++ +ES++ FK+M + G+ D+++F+ L+
Sbjct: 295 SLARNIF-ERSEKDDVSYNTLILGYSQSPWCFESLL-LFKQMRSVGIDYDAVSFMGALSA 352
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C + G+ + +++ + P + ++D+ + G L A ++ +I S
Sbjct: 353 CTNLSVFKHGKEIHCVLVRRL-LSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVAS 411
Query: 528 VLQSLLGACRIHGNVEMGERIADALMK 554
+LG +HG +++ + + LMK
Sbjct: 412 WNTMILGY-GMHGQIDIAFELFE-LMK 436
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 257/526 (48%), Gaps = 51/526 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + ++ +F+ + + VSWN+ + F + D L +M+ V+ +
Sbjct: 83 VDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGS 142
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T S+ L ++ F G ++H +K +D +++V N+L+ MY+++G L +A +F++
Sbjct: 143 ITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQ 202
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +++ VSWNA+++ Q+G EA + +M + G + ++ + AC +L++
Sbjct: 203 MKDRNVVSWNAMIANLVQNGA-ETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKM 261
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GKQIH SI+ G + + N L+ YSKC A +F R +++ +S+ T+I +
Sbjct: 262 GKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQ 320
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+++ LFK+MR G+ + V+F+G + A + ++ K G+ IH + ++ P +
Sbjct: 321 SPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFL 380
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ +Y + + + K+F++++ +++ SWN +I GY +G A + F ++K
Sbjct: 381 SNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFE-LFELMKGDG 439
Query: 353 PNAYTFGSVLNAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ Y S + + A L G++ S ++ ++ + + ++D+ G+ G + +
Sbjct: 440 LD-YDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKC 498
Query: 412 QRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ + + W A++ A HG+ E + Q+
Sbjct: 499 AEIIRDMPFPANSDVWGALLGACRIHGNIE--LAQW------------------------ 532
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
HLF+ LK H +Y+ M++M GR EA ++
Sbjct: 533 -----AAEHLFE--LKPEH----SGYYTLMINMYAETGRWNEANKI 567
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 209/633 (33%), Positives = 338/633 (53%), Gaps = 24/633 (3%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALS 65
++GQ D AL +FN++ +SWN ++SG S+D A ++ D V+++ +S
Sbjct: 61 RNGQCDSALRLFNSMPRRSSISWNAMISGC-LSNDKFYLARQLFEKMPTRDLVSWNVMIS 119
Query: 66 FCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVS 125
C+ + L+ L+ + +V NA+++ Y++ G + EA+ +FDEMP K+S+S
Sbjct: 120 GCVRYRN----LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSIS 175
Query: 126 WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVS 185
WN +L+ Y Q+G +E L E + D + G+ K L G+
Sbjct: 176 WNGMLAAYVQNGR--IEDARRLFES-----KADWELISWNCMMGGYVKRNRL-VDARGIF 227
Query: 186 IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKE 245
+M VS N ++S Y++ +A ++F R+V +WT M+S ++ +
Sbjct: 228 DRMPERDEVS-WNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEAR 286
Query: 246 MRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
DG+ N V++ +I + + R + N S N +IT YA+
Sbjct: 287 RVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNV----SSWNTMITGYAQNG 342
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLN 363
+ + FD + R+ ISW A+I+GYAQ+G A+ F + ++ + N TF S L+
Sbjct: 343 DIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLS 402
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
AE +L+ G++ H ++K GL+S VG+ALL MY K G+I ++ VF +EK
Sbjct: 403 T--CAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEV 460
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
+W +I+ ARHG + + F+ M+ G+ PD +T + VL+ C G++ KG F S
Sbjct: 461 VSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYS 520
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
M +DY I + HY+CM+D+LGR GRL++A+ L+ +P P + +LLGA RIHGN E
Sbjct: 521 MTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTE 580
Query: 544 MGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG 603
+GE+ A + +MEP SG YVL+SNLYA G W V +R M+ +GV+K G+SW +V
Sbjct: 581 LGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQ 640
Query: 604 DIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ +H F+ GD+ HP + IY E L +MK
Sbjct: 641 --NKIHTFTVGDSVHPERDRIYTFLEELDLKMK 671
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 178/362 (49%), Gaps = 36/362 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
M Y K + A IF+ + D VSWNT++SG+ ++ + L A R+ V D T+
Sbjct: 211 MGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLE-AQRLFEESPVRDVFTW 269
Query: 61 STALS-----FCLDHEGFLF-------GLQLHSLIVKF----GLD-----------SEVY 93
+ +S LD +F + +++I + +D V
Sbjct: 270 TAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVS 329
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
N +IT Y++ G + +AR FD MP +DS+SW AI++GY Q G YG EA+ +EM R
Sbjct: 330 SWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSG-YGEEALHLFVEMKRD 388
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G RL+ +FTS S C LELGKQ+HG +K G + VGN L+ Y KC DA
Sbjct: 389 GERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDA 448
Query: 214 NKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
VF + ++ V+SW TMI+ ++A+ LF+ M+ G+ P+DVT +G++ A S
Sbjct: 449 YIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHT 508
Query: 269 NLVKEG-RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNA 326
LV +G + + + C+I + R + D++ + + + +W A
Sbjct: 509 GLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGA 568
Query: 327 LI 328
L+
Sbjct: 569 LL 570
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 185/407 (45%), Gaps = 33/407 (8%)
Query: 86 FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
D+++ N IT + R G+ A R+F+ MP + S+SWNA++SG + + +
Sbjct: 43 LATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLAR-- 100
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
++ K D VS+ S C +NL + + +M VS N ++S Y+
Sbjct: 101 ---QLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFD---QMPERDVVS-WNAMLSGYA 153
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIG 260
+ +A ++F M +N ISW M++ EDA LF+ D I
Sbjct: 154 QNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFES-------KADWELIS 206
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC-NCLITMYARFESMQDSEKVFDELSCR 319
+G VK R++ I V N +I+ YA+ + +++++F+E R
Sbjct: 207 W--NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVR 264
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRC 379
++ +W A++SGY QNG+ A + F G+ + N+ ++ +++ G + + +
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEARRVFDGM---PEKNSVSWNAII--AGYVQCKRMDQAREL 319
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
+ + S + ++ Y + G I +++ F+ ++ +W AII+ A+ G
Sbjct: 320 FEAMPCQNVSS----WNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYG 375
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
E ++ F EM+ G R + TF S L+ C + G+ + ++K
Sbjct: 376 EEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVK 422
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MYCK G D A +F + ++VSWNT+++G+ + +AL M G++ D VT
Sbjct: 438 MYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVT 497
Query: 60 YSTALSFCLDHEGFL-FGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
LS C H G + G + +S+ +G+ + +I + R GRL +A+ +
Sbjct: 498 MVGVLSAC-SHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKN 556
Query: 118 MP-NKDSVSWNAILS-----GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
MP D+ +W A+L G T+ G+ + I + E G+ + + +A+ G
Sbjct: 557 MPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM-EPDNSGMYVLLSNLYAASGRWGD 615
Query: 172 EKNLELGKQIHGVSIKMGY 190
+ L + GV GY
Sbjct: 616 VGRMRLRMRDRGVKKVPGY 634
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 202/615 (32%), Positives = 329/615 (53%), Gaps = 50/615 (8%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR---------- 113
L C+ G LHSL +K + Y N I +YS+ GRL AR+
Sbjct: 15 LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74
Query: 114 ---------------------VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR 152
+FD++P D VS+N ++S Y G+ L L MR
Sbjct: 75 FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE--TAPALGLFSGMR 132
Query: 153 K-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
+ GL +D + ++ +AC + L +G Q+H V++ G+ ++VSV N L++ Y K
Sbjct: 133 EMGLDMDXFTLSAVITACCDDVGL-IG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 212 DANKVFRRMHD-RNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI 265
DA +VF M R+ +SW +MI A+ LF+EM G+ + T ++ A
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 266 SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES-MQDSEKVFDELSCREIISW 324
+ + G HG IKT F V + LI +Y++ M D KVF+E++ +++ W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
N ++SGY+QN L F ++ +PN +F V++A S G++ HS
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPS--QGKQIHSL 368
Query: 383 IIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
+K + S+ I V +AL+ MY K G++ +++R+F+ E + + ++I+ A+HG
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEME 428
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
++ F+ M + + P SITF+SVL+ C G + +G + F+ M + ++IEP +HYSCM+
Sbjct: 429 SLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI 488
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG 561
D+LGR G+L EAE L+ ++P PG SLLGACR HGN+E+ + A+ ++++EP+ +
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAA 548
Query: 562 SYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRS 621
YV++SN+YA G WE VA +RK M+ +GV+K+ G SW +V +H F + D++HP
Sbjct: 549 PYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVK--KRIHVFVAEDSSHPMI 606
Query: 622 EEIYRMAECLGSEMK 636
+EIY E + +MK
Sbjct: 607 KEIYEFLEEMSGKMK 621
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 253/472 (53%), Gaps = 25/472 (5%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAVTY 60
Y K + A +F+ + PD+VS+NT++S + ++ AL M +G+ D T
Sbjct: 84 YAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTL 143
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S ++ C D G L G QLHS+ V G DS V V NAL+T Y + G L +A+RVF M
Sbjct: 144 SAVITACCDDVG-LIG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGG 201
Query: 121 -KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D VSWN+++ Y Q + G +A+ EM+R+GL +D + S +A ++L G
Sbjct: 202 IRDEVSWNSMIVAYGQHQE-GSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGL 260
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKC-EVTGDANKVFRRMHDRNVISWTTMI---SMN 235
Q HG IK G+ + VG+ L+ YSKC D KVF + + +++ W TM+ S N
Sbjct: 261 QFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQN 320
Query: 236 R---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP-S 291
EDA+ F++M+ G PND +F+ +I A S + +G+ IH L +K++ S S
Sbjct: 321 EEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRIS 380
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KE 350
V N LI MY++ ++QD+ ++FD ++ +S N++I+GYAQ+G+ + ++ F ++ ++
Sbjct: 381 VDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQ 440
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSI 408
P + TF SVL+A A ++ G + +++K + +P S ++D+ G+ G +
Sbjct: 441 IAPTSITFISVLSA--CAHTGRVEEGWN-YFNMMKEKFNIEPEAEHYSCMIDLLGRAGKL 497
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGDYE---SVMNQFKEMENKGVRP 456
E++ + W +++ A HG+ E NQ ++E P
Sbjct: 498 SEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 185/421 (43%), Gaps = 42/421 (9%)
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
F C E++L GK +H + IK N + YSKC A K F+ +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 222 DRNVISWTTMISMNREDAVSLFKEMRLDGVC-PNDVTFIGLIHAI--------SIGNLVK 272
D NV S+ +I+ +++ L D + P+ V++ LI A ++G
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 273 EGRM-------------------------IHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
M +H + + + F S SV N L+T Y + +
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 308 DSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV 365
D+++VF + R+ +SWN++I Y Q+ A+ F +++ + +T SVL A
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK-RGSIFESQRVFNETQEKSEF 424
ED+S G + H +IK G + VGS L+D+Y K G + + ++VF E E
Sbjct: 251 TCLEDLS--GGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308
Query: 425 AWTAIISALARHGDY-ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
W ++S +++ ++ E + F++M+ G RP+ +F+ V++ C +G+ +
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
LK + ++ M + G L++A L ++ +S L S++ HG +E
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVS-LNSMIAGYAQHG-IE 426
Query: 544 M 544
M
Sbjct: 427 M 427
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 202/579 (34%), Positives = 313/579 (54%), Gaps = 18/579 (3%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
GV + +TY L C + G LH ++K G ++ +V AL+ MYS+ + A
Sbjct: 41 GVHGNNLTYPLLLKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASA 100
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
R+VFDEMP + VSWNA++S Y++ +A+ L EM G +F S S +
Sbjct: 101 RQVFDEMPQRSVVSWNAMVSAYSRRSSMD-QALSLLKEMWVLGFEPTASTFVSILSGYSN 159
Query: 172 EKNLE---LGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
+ E LGK IH IK+G VS+ N LM Y + + +A KVF M ++++IS
Sbjct: 160 LDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIIS 219
Query: 228 WTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIH-AISIGNLVKEGRMIHGLC 281
WTTMI + +A LF +M+ V + V F+ LI I + +L+ +H L
Sbjct: 220 WTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASS-VHSLV 278
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
+K + V N LITMYA+ ++ + ++FD + + ++SW ++I+GY G A+
Sbjct: 279 LKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEAL 338
Query: 342 QAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
F +I+ + +PN T +V++A A+ SL GQ +I GL+SD V ++L+
Sbjct: 339 DLFRRMIRTDIRPNGATLATVVSA--CADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIH 396
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN-KGVRPDSI 459
MY K GSI +++ VF +K WT++I++ A HG ++ F +M +G+ PD+I
Sbjct: 397 MYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAI 456
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
+ SV C +G++ +G F SM KD+ I P+ +H +C++D+LGRVG+L+ A +
Sbjct: 457 VYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQG 516
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P V LL ACRIHGNVE+GE L+ P SGSYVLM+NLY G W+
Sbjct: 517 MPPDVQAQVWGPLLSACRIHGNVELGELATVRLLDSSPGSSGSYVLMANLYTSLGKWKEA 576
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTH 618
++R M KG+ KE G W+ V D H F+ G+ +
Sbjct: 577 HMMRNSMDGKGLVKESG--WSQVEVTDTYHTFAVGNQSQ 613
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 213/446 (47%), Gaps = 22/446 (4%)
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
+WN ++ T +G + + + M G+ +++++ AC + +++ G +HG
Sbjct: 13 TWNLMIRDSTNNG-FFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTMLHGH 71
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDA 239
+K+G+ V L+ YSKC A +VF M R+V+SW M+S + + A
Sbjct: 72 VLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQA 131
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK-----EGRMIHGLCIKTNFLS-EPSVC 293
+SL KEM + G P TF+ ++ S NL G+ IH IK + E S+
Sbjct: 132 LSLLKEMWVLGFEPTASTFVSILSGYS--NLDSFEFHLLGKSIHCCLIKLGIVYLEVSLA 189
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N L+ MY +F M ++ KVFD + + IISW +I GY + G ++ A F+ + +S
Sbjct: 190 NSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSV- 248
Query: 354 NAYTFGSVLNAV-GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
F LN + G + L HS ++K G + V + L+ MY K G++ ++
Sbjct: 249 -GIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSAR 307
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
R+F+ EKS +WT++I+ G ++ F+ M +RP+ T +V++ C G
Sbjct: 308 RIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLG 367
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+ G+ + + + + +E + ++ M + G + +A E+ ++ L+V S+
Sbjct: 368 SLSIGQEIEEYIFLN-GLESDQQVQTSLIHMYSKCGSIVKAREVFERVT-DKDLTVWTSM 425
Query: 533 LGACRIHGNVEMGERIADALMKMEPA 558
+ + IHG MG KM A
Sbjct: 426 INSYAIHG---MGNEAISLFHKMTTA 448
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 226/467 (48%), Gaps = 41/467 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K A +F+ + +VSWN ++S + + D ALS M ++G A
Sbjct: 88 VDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTA 147
Query: 58 VTYSTALSFCLDHEGF---LFGLQLHSLIVKFGLDS-EVYVGNALITMYSRWGRLVEARR 113
T+ + LS + + F L G +H ++K G+ EV + N+L+ MY ++ + EAR+
Sbjct: 148 STFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARK 207
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VFD M K +SW ++ GY + G + VEA +M + + +D V F + S C +
Sbjct: 208 VFDLMDEKSIISWTTMIGGYVKIG-HAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVR 266
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+L L +H + +K G V N+L++ Y+KC A ++F + +++++SWT+MI+
Sbjct: 267 DLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIA 326
Query: 234 -----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHA------ISIGNLVKEGRMIHGLCI 282
+ +A+ LF+ M + PN T ++ A +SIG ++E ++GL
Sbjct: 327 GYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGL-- 384
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
S+ V LI MY++ S+ + +VF+ ++ +++ W ++I+ YA +G+ A+
Sbjct: 385 ----ESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAIS 440
Query: 343 AFFGVIKES--KPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
F + P+A + SV A G E+ LK+ + G+ +
Sbjct: 441 LFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEE-GLKYFKSMQK---DFGITPTVEHCTC 496
Query: 398 LLDMYGKRGSIFESQRVFNETQ----EKSEFAWTAIISALARHGDYE 440
L+D+ G+ G + N Q + W ++SA HG+ E
Sbjct: 497 LIDLLGRVGQL---DLALNAIQGMPPDVQAQVWGPLLSACRIHGNVE 540
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 135/264 (51%), Gaps = 16/264 (6%)
Query: 217 FRRMHDRNVISWTTMI--SMNR---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
R R++ +W MI S N ++++ M GV N++T+ L+ A + +
Sbjct: 3 LRPSFRRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSI 62
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
+ G M+HG +K F ++ V L+ MY++ + + +VFDE+ R ++SWNA++S Y
Sbjct: 63 QHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAY 122
Query: 332 AQNGLSLAAVQAFFGVIKES-----KPNAYTFGSVLNAVGAAEDISLK-HGQRCHSHIIK 385
++ +++ ++KE +P A TF S+L+ + G+ H +IK
Sbjct: 123 SRR----SSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIK 178
Query: 386 VGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMN 444
+G+ + + ++L+ MY + + E+++VF+ EKS +WT +I + G
Sbjct: 179 LGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYG 238
Query: 445 QFKEMENKGVRPDSITFLSVLTVC 468
F +M+++ V D + FL++++ C
Sbjct: 239 LFYQMQHQSVGIDFVVFLNLISGC 262
>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/545 (33%), Positives = 306/545 (56%), Gaps = 24/545 (4%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
+SFC + G+QLHS I++ G S V++ +A++ MY++ + A VF+EMP ++
Sbjct: 76 VSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNEMPERND 135
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNLELGKQIH 182
V+WN+++ GY L M +R + S ++ C + G Q+H
Sbjct: 136 VTWNSLIFGY-------------LNVMPTCAMRGVTSFSVSTCLVVCSQLEVRNFGAQVH 182
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NRE 237
G+S+K+G+ +V VG L+ YSKC+ D+ +VF M D+NV++WT M++ +
Sbjct: 183 GLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQPD 242
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
+A+ L +EM G+ N VT+ L+ + S ++ + +H I+ + L+
Sbjct: 243 EAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIAATLV 302
Query: 298 TMYARF-ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
T+Y++ +++D K+ + + ISWNA+I+GY+ GL A++ F + + K +
Sbjct: 303 TVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDF 362
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
YTF S+L A+GA ++++ G+ H+ I+K G S V + L+ MY + G+I +S+RVF
Sbjct: 363 YTFTSLLGAIGAF--LAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVF 420
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
++ +W A+++ A HG + F++M ++P+S TFL+VL+ C G +
Sbjct: 421 WLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVD 480
Query: 476 KGRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
KG FD M D +EP +HY+ +VD+ GR G L EAE ++ +P PG SV ++LL
Sbjct: 481 KGLEYFDFMRSDISLEPLRVEHYASVVDIFGRAGYLSEAEAIINCMPMDPGPSVYKALLS 540
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
AC +HGN E+ R A L+++ P +Y+L+SN+ A +G W+ A +RK M +GVRK
Sbjct: 541 ACLVHGNREIAVRSARKLLELWPDDPATYILLSNMLATEGYWDDAADVRKLMCDRGVRKN 600
Query: 595 VGFSW 599
G+SW
Sbjct: 601 PGYSW 605
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/474 (31%), Positives = 253/474 (53%), Gaps = 22/474 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++MY K + A +FN + + V+WN+++ G+ L+ + GV + +
Sbjct: 111 VDMYAKCSEIQSAHEVFNEMPERNDVTWNSLIFGY------LNVMPTCAMRGVT--SFSV 162
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
ST L C E FG Q+H L +K G D+ V+VG ALI MYS+ + ++ RVFD M +
Sbjct: 163 STCLVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVD 222
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
K+ V+W A+++ Y Q+ + EA++ + EMMR G++ ++V++ S S+ K ++ KQ
Sbjct: 223 KNVVTWTAMVTAYAQN-EQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQ 281
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVT-GDANKVFRRMHDRNVISWTTMISMNR--- 236
+H I+ G ++ + L++ YSKC D NK+ + + ISW +I+
Sbjct: 282 VHCSIIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLG 341
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
EDA+ F EMR + + TF L+ AI ++EGR +H L +KT + S V N
Sbjct: 342 LGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQN 401
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
L++MYAR ++ DS++VF + +++SWNAL++G A +G AV+ F + K KP
Sbjct: 402 GLVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKP 461
Query: 354 NAYTFGSVLNAVG--AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
N+ TF +VL+A + D L++ S I L + ++++D++G+ G + E+
Sbjct: 462 NSTTFLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHY--ASVVDIFGRAGYLSEA 519
Query: 412 QRVFN-ETQEKSEFAWTAIISALARHGDYE-SVMNQFKEMENKGVRPDSITFLS 463
+ + N + + A++SA HG+ E +V + K +E P + LS
Sbjct: 520 EAIINCMPMDPGPSVYKALLSACLVHGNREIAVRSARKLLELWPDDPATYILLS 573
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 226/475 (47%), Gaps = 28/475 (5%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
++R G + S C + +LG Q+H I+MG+ ++V + + ++ Y+KC
Sbjct: 60 LLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSE 119
Query: 210 TGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEMRLDGVCPNDV-TFIGLIHAISIG 268
A++VF M +RN ++W ++I +++ + GV V T + + + +
Sbjct: 120 IQSAHEVFNEMPERNDVTWNSLIF----GYLNVMPTCAMRGVTSFSVSTCLVVCSQLEVR 175
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
N G +HGL +K F + V LI MY++ + + DS +VFD + + +++W A++
Sbjct: 176 NF---GAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMV 232
Query: 329 SGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
+ YAQN A+ +++ K N T+ S+L++ + +++ ++ H II+ G
Sbjct: 233 TAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPK--YMQYCKQVHCSIIRCG 290
Query: 388 LDSDPIVGSALLDMYGKRGSIFES-QRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
L+ + + + L+ +Y K + E ++ + Q + +W A+I+ + G E + F
Sbjct: 291 LECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCF 350
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
EM + ++ D TF S+L G I +GR + ++K + S + +V M R
Sbjct: 351 CEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGY-ASSVYVQNGLVSMYAR 409
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG----NVEMGERIADALMKMEPAGSGS 562
G +++++ + + +S +LL C HG VE+ E++ K++P +
Sbjct: 410 CGAIDDSKRVFWLMEDHDVVS-WNALLTGCAHHGFGNEAVELFEQMRKT--KIKPNSTTF 466
Query: 563 YVLMSNL----YAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSS 613
++S +KG E +R + + +R E +A V DI G G+ S
Sbjct: 467 LAVLSACSHVGSVDKG-LEYFDFMRSDISLEPLRVE---HYASVVDIFGRAGYLS 517
>gi|297735121|emb|CBI17483.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 298/555 (53%), Gaps = 24/555 (4%)
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEM-MRKGLRLDHVSFTS 164
G L ARR+FD+M KD +SW ++SGY D EA+L M + GLR+D +
Sbjct: 70 GHLGNARRMFDKMSQKDEISWTTLISGYVNAND-SSEALLLFKNMRVESGLRIDPFILSL 128
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
A ACG ++ G+ +HG ++K G V VG+ L+ Y+K + +VF M RN
Sbjct: 129 AHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRN 188
Query: 225 VISWTTMIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
V+SWT +I+ N+E A+ F EM V + TF + A + + GR IH
Sbjct: 189 VVSWTAIITGLVRAGYNKE-ALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIH 247
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
+K F V N L TMY + ++ +F+++S R+++SW +I+ Q G
Sbjct: 248 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 307
Query: 339 AAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
AVQAF ++ES PN YTF +V++ G A ++ G++ H+ I+ +GL + V +
Sbjct: 308 CAVQAFIR-MRESDVSPNEYTFAAVIS--GCANLARIEWGEQLHALILHLGLAASLSVEN 364
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
+++ MY K G + S +F+E + +W+ II+ ++ G M +G +P
Sbjct: 365 SIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKP 424
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLK--------DYHIEPSPDHYSCMVDMLGRVG 508
SVL+ CG ++ G+ L +L Y I PS +HY CM+D+L R G
Sbjct: 425 TEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMKYQISPSKEHYGCMIDLLCRAG 484
Query: 509 RLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSN 568
RL +AE ++ +P V +LL ACR+HG+VE G R A+ ++++EP +G+++ ++N
Sbjct: 485 RLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLAN 544
Query: 569 LYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMA 628
+YA KG W A +RK MKSKGV KE G+SW V D+ + F +GD +HP+ E+IY M
Sbjct: 545 IYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDL--VFAFVAGDRSHPQGEDIYNML 602
Query: 629 ECLGSEMKYLNSKRE 643
+ L S + + +E
Sbjct: 603 DLLASRTELADCVQE 617
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 139/455 (30%), Positives = 235/455 (51%), Gaps = 23/455 (5%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNL-IGVVFDAVTYS 61
K+G A +F+ ++ D +SW T++SG+ ++D AL M + G+ D S
Sbjct: 68 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 127
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
A C + +G LH VK GL + V+VG+AL+ MY++ G++ E RRVF EMP +
Sbjct: 128 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 187
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
+ VSW AI++G + G Y EA++ EM R + D +F A AC L G++I
Sbjct: 188 NVVSWTAIITGLVRAG-YNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREI 246
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----MNRE 237
H ++K G+ V N L + Y+KC +F +M R+V+SWTT+I+ M +E
Sbjct: 247 HAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQE 306
Query: 238 D-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
+ AV F MR V PN+ TF +I + ++ G +H L + + SV N +
Sbjct: 307 ECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSI 366
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNA 355
+TMYA+ + S +F E++ R+I+SW+ +I+GY+Q G A + + E KP
Sbjct: 367 MTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTE 426
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS---------ALLDMYGKRG 406
+ SVL+A G L+HG++ H++++ +GL+ + ++D+ + G
Sbjct: 427 FALASVLSACGNMA--ILEHGKQLHAYVLSIGLEHTAMKYQISPSKEHYGCMIDLLCRAG 484
Query: 407 SIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ +++ + + + W+ ++ A HGD E
Sbjct: 485 RLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVE 519
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 172/346 (49%), Gaps = 19/346 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K+G+ + +F+ + ++VSW +++G ++ +AL + M V +D+
Sbjct: 165 LDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDS 224
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ AL C D +G ++H+ +K G D +V N L TMY++ G+L +F++
Sbjct: 225 YTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEK 284
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSW I++ Q G A+ A I M + + +F + S C + +E
Sbjct: 285 MSMRDVVSWTTIITTLVQMGQEEC-AVQAFIRMRESDVSPNEYTFAAVISGCANLARIEW 343
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+Q+H + + +G +SV N +M+ Y+KC ++ +F M R+++SW+T+I+ +
Sbjct: 344 GEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQ 403
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT-------N 285
+A L MR++G P + ++ A +++ G+ +H +
Sbjct: 404 GGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMK 463
Query: 286 FLSEPSV--CNCLITMYARFESMQDSEKVFDELSC-REIISWNALI 328
+ PS C+I + R + D+E + + + R+ + W+ L+
Sbjct: 464 YQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLL 509
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M MY K GQ + IF+ + DIVSW+T+++G+ + +A M + G
Sbjct: 367 MTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTE 426
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD----------SEVYVGNALITMYSRWGR 107
++ LS C + G QLH+ ++ GL+ S+ + G +I + R GR
Sbjct: 427 FALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMKYQISPSKEHYG-CMIDLLCRAGR 485
Query: 108 LVEARRVFDEMP-NKDSVSWNAILSGYTQDGD 138
L +A + + MP ++D V W+ +L GD
Sbjct: 486 LSDAEHMIEAMPFHRDDVVWSTLLRACRVHGD 517
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME-NKGVRPDSITFL 462
K G + ++R+F++ +K E +WT +IS D + FK M G+R D
Sbjct: 68 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 127
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
CG N ++ G L +K + S S ++DM + G++ E + ++P
Sbjct: 128 LAHKACGLNSDVNYGELLHGYAVKTGLVN-SVFVGSALLDMYTKNGKIFEGRRVFHEMP 185
>gi|48475127|gb|AAT44196.1| hypothetical protein, contains pentatricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|51854327|gb|AAU10708.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 634
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 200/568 (35%), Positives = 304/568 (53%), Gaps = 18/568 (3%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH+ V+ S V+V AL +Y++ G L A +VFDEMP+K+ VSW +++ T+ G
Sbjct: 44 LHAFAVRSSAVSSVFVATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLTRAGR 103
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
EA+ EM G+ D ++ +A +AC L G+++H K+G + V N
Sbjct: 104 RH-EALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGREVHAFCAKLGLDSTPYVAN 162
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLD---- 249
L + Y++C A RM R+V +WTT+IS ++A+ F M +
Sbjct: 163 TLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSV 222
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES-MQD 308
PN+ T+ +I A + V G +H + F SV N L+T+Y R +
Sbjct: 223 AASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACARSVANSLVTLYTRAAGCLSA 282
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES---KPNAYTFGSVLNAV 365
++ VF E ++++SW+A+ISGYAQ GL+ A F + S +PN +T S+L+
Sbjct: 283 ADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVC 342
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
A SL G++ H+ + GL+ ++ SAL+DMYGK GS+ ++ VF+ + +
Sbjct: 343 ATAA--SLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVS 400
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
WTA+I A HG + + F+EM + G++PD +TF+ VL C G + G + M
Sbjct: 401 WTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMN 460
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL-QSLLGACRIHGNVEM 544
+ Y + P+ +HY C+VD+LGR GR+ EAEEL+G+I V+ SLL AC G E
Sbjct: 461 QIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEET 520
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
G++ A+ M+ EP G+G++V M+NLYA KG W A R MK KGV K G+S VG
Sbjct: 521 GKKAAERAMEAEPWGAGAHVAMANLYASKGQWHEAAQERHMMKQKGVVKGAGWSSITVGG 580
Query: 605 IDGLHG-FSSGDNTHPRSEEIYRMAECL 631
G F + D THP+ IYRM E +
Sbjct: 581 EGRRVGVFVASDRTHPQDSAIYRMLELI 608
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 228/459 (49%), Gaps = 22/459 (4%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
++Y K+G AL +F+ + + ++VSW T+++ ++ +AL M GV D+
Sbjct: 65 DVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSY 124
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
Y+ AL+ C D G ++H+ K GLDS YV N L T+Y+R + A M
Sbjct: 125 AYAAALTACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRM 184
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK----GLRLDHVSFTSAASACGHEKN 174
+D +W ++S Y Q G EAI A + M+R+ + ++ + +AC
Sbjct: 185 GTRDVAAWTTVISAYVQTGR-AKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAW 243
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE-VTGDANKVFRRMHDRNVISWTTMIS 233
+ LG+Q+H + + G+ SV N L++ Y++ A+ VFR ++V+SW+ +IS
Sbjct: 244 VCLGEQLHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIIS 303
Query: 234 MN-----REDAVSLFKEMRLDGVC--PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
EDA +LF+EMR C PN+ T L+ + + GR +H L +
Sbjct: 304 GYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGL 363
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ + LI MY + SM D++ VF +++SW A+I GYA++G S A++ F
Sbjct: 364 EHHAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQE 423
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGK 404
+ KP+ TF VLNA A ++ L G R + + ++ GL ++D+ G+
Sbjct: 424 MCHVGLKPDHVTFIGVLNACCHAGEVEL--GLRYLNEMNQIYGLYPAKEHYGCVVDLLGR 481
Query: 405 RGSIFESQRVFNE--TQEKSEFAWTAIISALARHGDYES 441
G I E++ + + E+ WT+++ A A G+ E+
Sbjct: 482 AGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEET 520
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 174/366 (47%), Gaps = 17/366 (4%)
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
F S A+A + L +H +++ + V V L Y+K G A KVF M
Sbjct: 26 FKSCAAA-ADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCLGLALKVFDEMP 84
Query: 222 DRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
+NV+SWTT+++ R +A+ F EMR GV + + + A + L+ GR
Sbjct: 85 HKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGRE 144
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
+H C K S P V N L T+YAR + + + R++ +W +IS Y Q G
Sbjct: 145 VHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQTGR 204
Query: 337 SLAAVQAFFGVIKE-----SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
+ A++AF +++E + PN YT+ +V+ A + L G++ H+ + G
Sbjct: 205 AKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCL--GEQLHAQAARKGFACA 262
Query: 392 PIVGSALLDMYGK-RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
V ++L+ +Y + G + + VF E+ K +W+AIIS A+ G E F+EM
Sbjct: 263 RSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREMR 322
Query: 451 NKG--VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG 508
+ RP+ T S+L+VC + GR L ++ +E S ++DM G+ G
Sbjct: 323 HHSGCPRPNEFTLASLLSVCATAASLDAGRQL-HTLAVAAGLEHHAMIRSALIDMYGKSG 381
Query: 509 RLEEAE 514
+ +A+
Sbjct: 382 SMLDAD 387
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 11/186 (5%)
Query: 343 AFFGVIKESKP-----NAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGS 396
A F ++ S P + + V + AA D L H H+ ++ S V +
Sbjct: 2 ALFSRLRASSPPLAPADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVAT 61
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
AL D+Y K G + + +VF+E K+ +WT ++++L R G + +F EM GV
Sbjct: 62 ALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHC 121
Query: 457 DSITFLSVLTVCGRNGMIHKGR--HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
DS + + LT C G++ +GR H F + L ++ +P + + + R ++ A
Sbjct: 122 DSYAYAAALTACADAGLLSRGREVHAFCAKLG---LDSTPYVANTLATLYARCSDVDRAL 178
Query: 515 ELVGQI 520
V ++
Sbjct: 179 AAVSRM 184
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY KSG A +F++ D+VSW ++ G+ + S AL M +G+ D
Sbjct: 374 IDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDH 433
Query: 58 VTYSTALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT+ L+ C GL+ L+ + +GL ++ + R GR+ EA +
Sbjct: 434 VTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIG 493
Query: 117 EMP--NKDSVSWNAILSGYTQDGD 138
++ +D V W ++L G+
Sbjct: 494 KIAANERDGVVWTSLLRACAARGE 517
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/539 (35%), Positives = 310/539 (57%), Gaps = 21/539 (3%)
Query: 114 VFDEMPNKDSV-SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+F++ +K +V SWN++++ + GD VEA+ A M + L+ + +F A +C
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGD-SVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 165
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+L G+Q H ++ G+ + V + L+ YSKC DA +F + RN++SWT+MI
Sbjct: 166 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 225
Query: 233 S--MNREDA---VSLFKEMRL-------DG-VCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
+ + +DA + LFKE + DG VC + + + ++ A S + +HG
Sbjct: 226 TGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHG 285
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
IK F + V N L+ YA+ + S +VFD ++ R++ISWN++I+ YAQNG+S
Sbjct: 286 FLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTE 345
Query: 340 AVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
+++ F ++K E NA T +VL + A S + G+ H +IK+GL+S+ VG++
Sbjct: 346 SMEIFHRMVKDGEINYNAVTLSAVL--LACAHSGSQRLGKCIHDQVIKMGLESNVFVGTS 403
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
++DMY K G + +++ F+ +EK+ +W+A+++ HG + + F EM GV+P+
Sbjct: 404 IIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPN 463
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
ITF+SVL C G++ +G H F +M ++ +EP +HY CMVD+LGR G L+EA +L+
Sbjct: 464 YITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLI 523
Query: 518 GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
+ P V +LLGACR+H NV++GE A L +++P G YVL+SN+YA+ G WE
Sbjct: 524 KGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWE 583
Query: 578 MVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V +R MK+ G+ K GFS D+ +H F GD HP+ E+IY E L +++
Sbjct: 584 DVERMRILMKNSGLVKPPGFSLVDIK--GRVHVFLVGDREHPQHEKIYEYLEKLSMKLQ 640
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 227/449 (50%), Gaps = 30/449 (6%)
Query: 16 IFNN-LNNPDIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFDAVTYSTALSFCLDH 70
+FN ++ ++ SWN+V++ +S D++ ALR M + + + T+ A+ C
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVE-ALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 165
Query: 71 EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL 130
G Q H + FG + +++V +AL+ MYS+ G L +AR +FDE+ +++ VSW +++
Sbjct: 166 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 225
Query: 131 SGYTQDGDYGVEAILALIEMMRK--------GLRLDHVSFTSAASACGHEKNLELGKQIH 182
+GY Q+ D A+L E + + + +D ++ S SAC + + +H
Sbjct: 226 TGYVQNDD-AHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVH 284
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS- 241
G IK G+ + V N LM Y+KC G + +VF M +R+VISW ++I++ ++ +S
Sbjct: 285 GFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMST 344
Query: 242 ----LFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
+F M DG + N VT ++ A + + G+ IH IK S V +
Sbjct: 345 ESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSI 404
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNA 355
I MY + ++ + K FD + + + SW+A+++GY +G + A++ F+ + + KPN
Sbjct: 405 IDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNY 464
Query: 356 YTFGSVLNAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIFESQ 412
TF SVL A A + H + SH D +P V ++D+ G+ G + E+
Sbjct: 465 ITFVSVLAACSHAGLLEEGWHWFKAMSH----EFDVEPGVEHYGCMVDLLGRAGYLKEAF 520
Query: 413 RVFNETQEKSEF-AWTAIISALARHGDYE 440
+ + + +F W A++ A H + +
Sbjct: 521 DLIKGMKLRPDFVVWGALLGACRMHKNVD 549
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 179/349 (51%), Gaps = 24/349 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI--------- 51
++MY K G+ A +F+ +++ +IVSW ++++G+ ++DDA L
Sbjct: 194 VDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEG 253
Query: 52 --GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
V D + + LS C +H ++K G + ++ V N L+ Y++ G L
Sbjct: 254 DGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELG 313
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASA 168
+RRVFD M +D +SWN+I++ Y Q+G E++ M++ G + + V+ ++ A
Sbjct: 314 VSRRVFDGMAERDVISWNSIIAVYAQNG-MSTESMEIFHRMVKDGEINYNAVTLSAVLLA 372
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C H + LGK IH IKMG ++V VG ++ Y KC A K F RM ++NV SW
Sbjct: 373 CAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSW 432
Query: 229 TTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL-CI 282
+ M++ + ++A+ +F EM + GV PN +TF+ ++ A S L++EG H +
Sbjct: 433 SAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG--WHWFKAM 490
Query: 283 KTNFLSEPSV--CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALI 328
F EP V C++ + R ++++ + + R + + W AL+
Sbjct: 491 SHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 539
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 198/641 (30%), Positives = 335/641 (52%), Gaps = 32/641 (4%)
Query: 21 NNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGL 77
++PD N V+ GF + + AL+ M G D T+ + C G
Sbjct: 68 SSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGR 127
Query: 78 QLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
HS ++ GL SEVY GN+L+ Y++ G + +A RVFD MP +D V+WN+++ GY +
Sbjct: 128 AAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSN 187
Query: 137 GDYGVEAILALIEMMRKGLRLDH--VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
G G A+ EM +GL++ H V +A +AC + L G+++H I+ G V
Sbjct: 188 G-LGALALDCFREM-HEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDV 245
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMRLD 249
VG L+ Y KC A +F M R V++W MI ++N E+A F +M+ +
Sbjct: 246 KVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAE 305
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
G VT I L+ A + GR +HG ++ FL + L+ MY++ ++ S
Sbjct: 306 GHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSS 365
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA---V 365
E +F +++ + ++SWN +I+ Y + A+ F ++ + P+ +T +V+ A +
Sbjct: 366 ETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLL 425
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
G L+ ++ HS+I+++ + +V +A++ MY + G + S+++F++ K +
Sbjct: 426 GL-----LRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVIS 480
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W II A HG + + F EM++ G++P+ TF+SVLT C +GM +G F+ M
Sbjct: 481 WNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQ 540
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+DY I P +HY CM D+LGR G L E + + IP P + SLL A R ++++
Sbjct: 541 RDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIA 600
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
E A+ + ++E +G YV++S++YA+ G WE V +R M KG+R+ D I
Sbjct: 601 EYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRR------TDARSI 654
Query: 606 DGLHG----FSSGDNTHPRSEEIYRMAECLGSEMKYLNSKR 642
LHG F +GD THP+S+ I+ +++ L ++ + R
Sbjct: 655 VELHGSSCSFVNGDMTHPQSKTIHEVSDVLSRKIGETDYPR 695
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 196/374 (52%), Gaps = 11/374 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD-DALSFALRMNL---IGVVFD 56
+ Y K G A +F+ + DIV+WN+++ G+ + AL+ + + V D
Sbjct: 150 LAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHD 209
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
V AL+ C + G ++H+ +++ GL+ +V VG +L+ MY + G + A +F
Sbjct: 210 GVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFA 269
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP++ V+WN ++ GY +G EA ++M +G +++ V+ + +AC ++
Sbjct: 270 TMPSRTVVTWNCMIGGYALNG-CPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSL 328
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--M 234
G+ +HG + + HV + L+ YSK + +F +M ++ ++SW MI+ M
Sbjct: 329 YGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYM 388
Query: 235 NRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+E +A++LF E+ + P+ T ++ A + L+++ R +H ++ ++
Sbjct: 389 YKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTL 448
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N ++ MYAR + S K+FD+++ +++ISWN +I GYA +G A++ F +
Sbjct: 449 VTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNG 508
Query: 352 -KPNAYTFGSVLNA 364
+PN TF SVL A
Sbjct: 509 LQPNESTFVSVLTA 522
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 193/402 (48%), Gaps = 21/402 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MYCK G A +F + + +V+WN ++ G+ + ++A ++M G +
Sbjct: 252 LDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEV 311
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT L+ C E L+G +H + + V + AL+ MYS+ G++ + +F +
Sbjct: 312 VTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQ 371
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M NK VSWN +++ Y Y EAI +E++ + L D+ + ++ A L
Sbjct: 372 MTNKTLVSWNNMIAAYMYKEMYN-EAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQ 430
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM-----I 232
+Q+H +++ YG + V N +M Y++C + K+F +M ++VISW T+ I
Sbjct: 431 CRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAI 490
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+ +F EM+ +G+ PN+ TF+ ++ A S+ + EG + L ++ ++ P +
Sbjct: 491 HGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNL-MQRDYGIIPQI 549
Query: 293 --CNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYA-QNGLSLA--AVQAFFG 346
C+ + R +++ K + + W +L++ +N + +A A + F
Sbjct: 550 EHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFE 609
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
+ ++ S+ G ED+ QR S +++ GL
Sbjct: 610 LEHDNTGCYVILSSMYADAGRWEDV-----QRIRSSMMEKGL 646
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 327/617 (52%), Gaps = 22/617 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLI----GVVF 55
MY + G A+ +F+ + D+V+W V+SG + + LS+ +RM G
Sbjct: 154 MYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARP 213
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ T + L C G LH VK G+ V ++L +MY++ +AR +F
Sbjct: 214 NSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILF 273
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
E+P KD VSW +++ Y + G + +A+ + M GL+ D V + + G++ +
Sbjct: 274 PELPEKDLVSWTSLIGAYCRAG-HAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKV 332
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
GK H ++ +G V +GN L+S Y+KC+ A VFR +H R+ SW++M+
Sbjct: 333 RGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAY 392
Query: 236 RE-----DAVSLFKEMRL----DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+ + L++EM+ + + + +G L + G+ H IK
Sbjct: 393 CKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRL-RLGQSAHCYSIKHLA 451
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
SV N LI+MY R + + K+F + +++++W+ALIS Y+ G S A+ +
Sbjct: 452 GENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQ 511
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ E KPN+ T SV+++ A +L+HG+ HSH+ VGL+ D + +AL+DMY K
Sbjct: 512 MLTEGVKPNSATLVSVISSC--ANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKC 569
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++++F+ E+ W +IS HG+ + F ME V+P+S+TFL++L
Sbjct: 570 GQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAIL 629
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ KGR LF M ++Y +EP+ HY+CMVD+LG+ G L+EAE++V +P P
Sbjct: 630 SACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPD 688
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ +LLGAC++H N EMG R+A +P G Y+LMSN Y W + LR
Sbjct: 689 GGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDM 748
Query: 586 MKSKGVRKEVGFSWADV 602
MK+ GV K +G+S D+
Sbjct: 749 MKNHGVEKSIGWSTIDI 765
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 148/511 (28%), Positives = 257/511 (50%), Gaps = 19/511 (3%)
Query: 23 PDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQL 79
PD WN++L ++ D LS RM G T S + G +
Sbjct: 70 PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAV 129
Query: 80 HSLIVKFGL---DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
H+ V+FGL D V V ++L+ MY+R G + +A R+FDEMP +D V+W A++SG +
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCN 189
Query: 137 GDYGVEAILALIEMMRK----GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
G G E + L+ M+R G R + + S ACG L +G +HG +K G G
Sbjct: 190 GQCG-EGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGH 248
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMR 247
SV + L S Y+KC+ T DA +F + +++++SWT++I + E AV LF M
Sbjct: 249 CPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGME 308
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
G+ P++V L+ + V+ G+ H ++ NF + N LI+MYA+ + +
Sbjct: 309 ESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVD 368
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVG 366
+ VF L R+ SW++++ Y + GL L ++ + + ++ Y S+++ +
Sbjct: 369 IAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIIS 428
Query: 367 AAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ + L+ GQ H + IK + V +AL+ MYG+ G+ ++++F + K
Sbjct: 429 SCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVT 488
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W+A+IS+ + G + + + +M +GV+P+S T +SV++ C + G L S +
Sbjct: 489 WSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE-LIHSHV 547
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
KD +E + +VDM + G+L A ++
Sbjct: 548 KDVGLECDLSICTALVDMYMKCGQLGIARKM 578
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 224/456 (49%), Gaps = 24/456 (5%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAV 58
+MY K + A +F L D+VSW +++ + + ++ A+ L M G+ D V
Sbjct: 258 SMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEV 317
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
S L+ + G H+ IV+ V +GNALI+MY++ ++ A VF +
Sbjct: 318 VISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRML 377
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSF-------TSAASACGH 171
+D+ SW++++ Y + G L +E+ R+ D F S S+C
Sbjct: 378 HQRDTDSWSSMVVAYCKAG-----LDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSR 432
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
L LG+ H SIK G + SV N L+S Y +C A K+F + ++V++W+ +
Sbjct: 433 LGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSAL 492
Query: 232 ISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS + +DA+ L+ +M +GV PN T + +I + + ++ G +IH
Sbjct: 493 ISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGL 552
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ S+C L+ MY + + + K+FD + R++++WN +ISGY +G ++ A++ F
Sbjct: 553 ECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSM 612
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ + + KPN+ TF ++L+A A + G+ + + + L+ + + ++D+ GK
Sbjct: 613 MERGNVKPNSLTFLAILSACCHAGLV--DKGRELFTRMEEYSLEPNLKHYACMVDLLGKS 670
Query: 406 GSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G + E++ V + E W ++ A H ++E
Sbjct: 671 GHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFE 706
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 16/329 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD-DALSFALRMNLIGVVFDAVT 59
++MY K Q D A +F L+ D SW++++ + K+ D L + D
Sbjct: 358 ISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFE 417
Query: 60 YSTALSFCLDHEGFLFG-LQL----HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
Y T + G L+L H +K V NALI+MY R G AR++
Sbjct: 418 YDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKI 477
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F + KD V+W+A++S Y+ G + +A+L +M+ +G++ + + S S+C +
Sbjct: 478 FGMVKTKDVVTWSALISSYSHLG-HSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAA 536
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
LE G+ IH +G +S+ L+ Y KC G A K+F M +R+V++W MIS
Sbjct: 537 LEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISG 596
Query: 234 --MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
M+ E A+ LF M V PN +TF+ ++ A LV +GR + + E
Sbjct: 597 YGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL--FTRMEEYSLE 654
Query: 290 PSVCN--CLITMYARFESMQDSEKVFDEL 316
P++ + C++ + + +Q++E V +
Sbjct: 655 PNLKHYACMVDLLGKSGHLQEAEDVVSAM 683
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K GQ A +F+++ D+V+WN ++SG+ ++ AL M V ++
Sbjct: 563 VDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNS 622
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T+ LS C H G + G +L + + ++ L+ + ++ + + G L EA V
Sbjct: 623 LTFLAILSACC-HAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVS 681
Query: 117 EMP-NKDSVSWNAIL 130
MP D W +L
Sbjct: 682 AMPIEPDGGIWGTLL 696
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 2/144 (1%)
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+ + GL P + L+ Y G + F + F W +++ + R D+
Sbjct: 29 HALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASDF 88
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR--HLFDSMLKDYHIEPSPDHY 497
S ++ + M G RP T V + G + G H + + S
Sbjct: 89 ASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVA 148
Query: 498 SCMVDMLGRVGRLEEAEELVGQIP 521
S +V M R G + +A L ++P
Sbjct: 149 SSLVYMYARCGSVRDAVRLFDEMP 172
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 327/617 (52%), Gaps = 22/617 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLI----GVVF 55
MY + G A+ +F+ + D+V+W V+SG + + LS+ +RM G
Sbjct: 154 MYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARP 213
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ T + L C G LH VK G+ V ++L +MY++ +AR +F
Sbjct: 214 NSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILF 273
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
E+P KD VSW +++ Y + G + +A+ + M GL+ D V + + G++ +
Sbjct: 274 PELPEKDLVSWTSLIGAYCRAG-HAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKV 332
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
GK H ++ +G V +GN L+S Y+KC+ A VFR +H R+ SW++M+
Sbjct: 333 RGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAY 392
Query: 236 RE-----DAVSLFKEMRL----DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+ + L++EM+ + + + +G L + G+ H IK
Sbjct: 393 CKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRL-RLGQSAHCYSIKHLA 451
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
SV N LI+MY R + + K+F + +++++W+ALIS Y+ G S A+ +
Sbjct: 452 GENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQ 511
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ E KPN+ T SV+++ A +L+HG+ HSH+ VGL+ D + +AL+DMY K
Sbjct: 512 MLTEGVKPNSATLVSVISS--CANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKC 569
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++++F+ E+ W +IS HG+ + F ME V+P+S+TFL++L
Sbjct: 570 GQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAIL 629
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ KGR LF M ++Y +EP+ HY+CMVD+LG+ G L+EAE++V +P P
Sbjct: 630 SACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPD 688
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ +LLGAC++H N EMG R+A +P G Y+LMSN Y W + LR
Sbjct: 689 GGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDM 748
Query: 586 MKSKGVRKEVGFSWADV 602
MK+ GV K +G+S D+
Sbjct: 749 MKNHGVEKSIGWSTIDI 765
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 148/511 (28%), Positives = 257/511 (50%), Gaps = 19/511 (3%)
Query: 23 PDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQL 79
PD WN++L ++ D LS RM G T S + G +
Sbjct: 70 PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAV 129
Query: 80 HSLIVKFGL---DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
H+ V+FGL D V V ++L+ MY+R G + +A R+FDEMP +D V+W A++SG +
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCN 189
Query: 137 GDYGVEAILALIEMMRK----GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
G G E + L+ M+R G R + + S ACG L +G +HG +K G G
Sbjct: 190 GQCG-EGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGH 248
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMR 247
SV + L S Y+KC+ T DA +F + +++++SWT++I + E AV LF M
Sbjct: 249 CPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGME 308
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
G+ P++V L+ + V+ G+ H ++ NF + N LI+MYA+ + +
Sbjct: 309 ESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVD 368
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVG 366
+ VF L R+ SW++++ Y + GL L ++ + + ++ Y S+++ +
Sbjct: 369 IAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIIS 428
Query: 367 AAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ + L+ GQ H + IK + V +AL+ MYG+ G+ ++++F + K
Sbjct: 429 SCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVT 488
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W+A+IS+ + G + + + +M +GV+P+S T +SV++ C + G L S +
Sbjct: 489 WSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE-LIHSHV 547
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
KD +E + +VDM + G+L A ++
Sbjct: 548 KDVGLECDLSICTALVDMYMKCGQLGIARKM 578
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 224/456 (49%), Gaps = 24/456 (5%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAV 58
+MY K + A +F L D+VSW +++ + + ++ A+ L M G+ D V
Sbjct: 258 SMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEV 317
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
S L+ + G H+ IV+ V +GNALI+MY++ ++ A VF +
Sbjct: 318 VISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRML 377
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSF-------TSAASACGH 171
+D+ SW++++ Y + G L +E+ R+ D F S S+C
Sbjct: 378 HQRDTDSWSSMVVAYCKAG-----LDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSR 432
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
L LG+ H SIK G + SV N L+S Y +C A K+F + ++V++W+ +
Sbjct: 433 LGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSAL 492
Query: 232 ISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS + +DA+ L+ +M +GV PN T + +I + + ++ G +IH
Sbjct: 493 ISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGL 552
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ S+C L+ MY + + + K+FD + R++++WN +ISGY +G ++ A++ F
Sbjct: 553 ECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSM 612
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ + + KPN+ TF ++L+A A + G+ + + + L+ + + ++D+ GK
Sbjct: 613 MERGNVKPNSLTFLAILSACCHAGLVD--KGRELFTRMEEYSLEPNLKHYACMVDLLGKS 670
Query: 406 GSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G + E++ V + E W ++ A H ++E
Sbjct: 671 GHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFE 706
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 16/329 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD-DALSFALRMNLIGVVFDAVT 59
++MY K Q D A +F L+ D SW++++ + K+ D L + D
Sbjct: 358 ISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFE 417
Query: 60 YSTALSFCLDHEGFLFG-LQL----HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
Y T + G L+L H +K V NALI+MY R G AR++
Sbjct: 418 YDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKI 477
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F + KD V+W+A++S Y+ G + +A+L +M+ +G++ + + S S+C +
Sbjct: 478 FGMVKTKDVVTWSALISSYSHLG-HSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAA 536
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
LE G+ IH +G +S+ L+ Y KC G A K+F M +R+V++W MIS
Sbjct: 537 LEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISG 596
Query: 234 --MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
M+ E A+ LF M V PN +TF+ ++ A LV +GR + + E
Sbjct: 597 YGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL--FTRMEEYSLE 654
Query: 290 PSVCN--CLITMYARFESMQDSEKVFDEL 316
P++ + C++ + + +Q++E V +
Sbjct: 655 PNLKHYACMVDLLGKSGHLQEAEDVVSAM 683
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFD 56
++MY K GQ A +F+++ D+V+WN ++SG+ +A+ AL+ M V +
Sbjct: 563 VDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQ-ALKLFSMMERGNVKPN 621
Query: 57 AVTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++T+ LS C H G + G +L + + ++ L+ + ++ + + G L EA V
Sbjct: 622 SLTFLAILSACC-HAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVV 680
Query: 116 DEMP-NKDSVSWNAIL 130
MP D W +L
Sbjct: 681 SAMPIEPDGGIWGTLL 696
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 2/144 (1%)
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+ + GL P + L+ Y G + F + F W +++ + R D+
Sbjct: 29 HALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASDF 88
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR--HLFDSMLKDYHIEPSPDHY 497
S ++ + M G RP T V + G + G H + + S
Sbjct: 89 ASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVA 148
Query: 498 SCMVDMLGRVGRLEEAEELVGQIP 521
S +V M R G + +A L ++P
Sbjct: 149 SSLVYMYARCGSVRDAVRLFDEMP 172
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/649 (29%), Positives = 337/649 (51%), Gaps = 17/649 (2%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALR---MNLIGVVFDAVTYSTAL 64
G+ D+A+ + PD N ++ GF + M G D T+ +
Sbjct: 55 GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
C G G H +++K GL+ +VY N+L+ Y++ G + +A RVFD MP +D V
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIV 174
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH--VSFTSAASACGHEKNLELGKQIH 182
+WN ++ GY +G G A LA + M L + H V +A +AC E + GK+IH
Sbjct: 175 TWNTMVDGYVSNG-LGSLA-LACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIH 232
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMNR--E 237
G I+ G + VG L+ Y KC A VF M R V++W MI ++N +
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
+A F +MR +G+ VT I L+ A + GR +HG ++ FL + L+
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
MY + ++ SEK+F +++ + ++SWN +I+ Y + A+ F ++ + P+ +
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYF 412
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
T +V+ A SL+H ++ HS+II +G + ++ +A+L MY + G + S+ +F+
Sbjct: 413 TMSTVVPAFVLLG--SLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFD 470
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
+ K +W +I A HG ++ + F EM+ G++P+ TF+SVLT C +G++ +
Sbjct: 471 KMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDE 530
Query: 477 GRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGAC 536
G F+ ML++Y + P +HY CM D+LGR G L E + + +P P V SLL A
Sbjct: 531 GWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTAS 590
Query: 537 RIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVG 596
R ++++ E A+ + ++E +G Y+++S++YA+ G WE V +R MK KG+R+
Sbjct: 591 RNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEP 650
Query: 597 FSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
S ++ F++GD +H +S I+ ++ L +++ + R ++
Sbjct: 651 ISLVELHSTAC--SFANGDMSHSQSRTIHEVSNILSRKIEETDDTRNQS 697
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 194/372 (52%), Gaps = 13/372 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRM-----NLIGVVFDAV 58
Y K G + A +F+ + DIV+WNT++ G+ S+ S AL + + V D+V
Sbjct: 152 YAKLGLVEDAERVFDGMPVRDIVTWNTMVDGY-VSNGLGSLALACFQEMHDALEVQHDSV 210
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
AL+ C + G ++H +++ GL+ ++ VG +L+ MY + G + AR VF M
Sbjct: 211 GIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATM 270
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P + V+WN ++ GY + + EA ++M +GL+++ V+ + +AC ++ G
Sbjct: 271 PLRTVVTWNCMIGGYALN-ERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYG 329
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNR 236
+ +HG ++ + HV + L+ Y K + K+F ++ ++ ++SW MI+ M +
Sbjct: 330 RSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYK 389
Query: 237 E---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E +A++LF E+ + P+ T ++ A + ++ R IH I + +
Sbjct: 390 EMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIM 449
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N ++ MYAR + S ++FD++ +++ISWN +I GYA +G A++ F + +
Sbjct: 450 NAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQ 509
Query: 353 PNAYTFGSVLNA 364
PN TF SVL A
Sbjct: 510 PNESTFVSVLTA 521
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 152/291 (52%), Gaps = 9/291 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MYCK G+ A +F + +V+WN ++ G+ E+ D+A ++M G+ +
Sbjct: 251 LDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEV 310
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT L+ C E L+G +H +V+ V + AL+ MY + G++ + ++F +
Sbjct: 311 VTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGK 370
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ NK VSWN +++ Y Y EAI +E++ + L D+ + ++ A +L
Sbjct: 371 IANKTLVSWNNMIAAYMYKEMY-TEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRH 429
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM-----I 232
+QIH I +GY + + N ++ Y++ + ++F +M ++VISW TM I
Sbjct: 430 CRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAI 489
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
+ A+ +F EM+ +G+ PN+ TF+ ++ A S+ LV EG M L ++
Sbjct: 490 HGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQ 540
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY +SG + IF+ + + D++SWNT++ G+ + AL M G+ +
Sbjct: 453 LHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNE 512
Query: 58 VTYSTALSFC----LDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
T+ + L+ C L EG++ F L L ++G+ ++ + + R G L E
Sbjct: 513 STFVSVLTACSVSGLVDEGWMHFNLMLQ----EYGMIPQIEHYGCMTDLLGREGDLREVL 568
Query: 113 RVFDEMP-NKDSVSWNAILSGYTQDGD-----YGVEAILAL 147
+ + MP + S W ++L+ D Y E I L
Sbjct: 569 QFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQL 609
>gi|125555089|gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
Length = 992
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/608 (31%), Positives = 331/608 (54%), Gaps = 17/608 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G D A+ +F+++ + WN+++SG+ K + + RM + GV DA
Sbjct: 386 VSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDA 445
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T + +S C E G +H+ V+ L+ V NAL+ MY+ G+L ++F
Sbjct: 446 LTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHT 505
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + +SWN I+SG+ ++GD V + +M ++ D V+ + S+ +++ +
Sbjct: 506 MEVRTLISWNTIISGFAENGD-SVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITV 564
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+ +H ++I+ G VSV N L++ Y+ C + K+F + N IS+ +++ R+
Sbjct: 565 GESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRK 624
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + LF M + PN +T + L+ I + +G+ +H I+ E S+
Sbjct: 625 NNLFKEILPLFYHMIKNDQKPNIITLLNLL---PICHSQLQGKTVHSYAIRNFSKLETSL 681
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
I MY+RF +++ +F + R I WNA++S Q + A F +
Sbjct: 682 FTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNV 741
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI-IKVGLDSDPIVGSALLDMYGKRGSIFE 410
K +A T +L + A + C + I ++ G D +V +AL+DM+ + GSI
Sbjct: 742 KTDAVT---MLALISACSQLGKADLAECVTAIALQKGFDGTIVVLNALIDMHSRCGSISF 798
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++++F+ + EK +W+ +I+A + HGD S ++ F M + G++PD ITF+SVL+ C R
Sbjct: 799 ARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSTGIKPDDITFVSVLSACSR 858
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G + +GR LF SML D+ I P +HY+CMVD+LGR G L+EA ++V +P P S+L+
Sbjct: 859 SGFLEQGRTLFRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLE 918
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLLGACR HGN ++GE + L + + SYV++SN+YA G W LR M++KG
Sbjct: 919 SLLGACRFHGNSKLGESVGKILTESDHGNPRSYVMLSNIYASAGKWSDYERLRSDMEAKG 978
Query: 591 VRKEVGFS 598
+ K+VG S
Sbjct: 979 LIKDVGVS 986
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 246/484 (50%), Gaps = 21/484 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS------GFEKSDDALSFALRMNLIGVV 54
++MY G +L +F+ ++VS N+++S +EK+ M G+V
Sbjct: 285 ISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRL---MRCKGLV 341
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ VT + L C + G G +H +++KFGL +V V +AL++MYS+ G L A +
Sbjct: 342 PNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFL 401
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F + K + WN+++SGY + + + + ++ M +G+ D ++ S S C H ++
Sbjct: 402 FSSVTEKSQLLWNSLISGYLVNNKWNM-VMGSVRRMQIEGVDPDALTVISVISKCRHTED 460
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L +GK IH +++ + SV N L++ Y+ C K+F M R +ISW T+IS
Sbjct: 461 LHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISG 520
Query: 235 NREDAVSL-----FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
E+ S+ F +MRL + + VT I LI ++S + G +H L I++ +
Sbjct: 521 FAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLD 580
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N LITMY +Q EK+FD LS IS+NAL++GY +N L + F+ +IK
Sbjct: 581 VSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPLFYHMIK 640
Query: 350 -ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ KPN T ++L S G+ HS+ I+ + + ++ + MY + ++
Sbjct: 641 NDQKPNIITLLNLLPICH-----SQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNL 695
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+F E++ W AI+SA + + F++++ V+ D++T L++++ C
Sbjct: 696 EYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISAC 755
Query: 469 GRNG 472
+ G
Sbjct: 756 SQLG 759
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 245/478 (51%), Gaps = 14/478 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFA---LRMNLIGVVFDA 57
++MY KSGQ D + +F+ + + D++SWN ++SG+ + L A +M G +A
Sbjct: 184 LDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNA 243
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ +S G LH+ +K G+ + V A I+MY+ +G L + +F +
Sbjct: 244 SSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQ 303
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
+ VS N+++S Q G + E + +MR KGL + V+ S C + +
Sbjct: 304 SLVDNLVSCNSMISVCMQHGAW--EKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGIN 361
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+ +HG+ IK G VSV + L+S YSK A +F + +++ + W ++IS
Sbjct: 362 HGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYL 421
Query: 234 -MNREDAV-SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N+ + V + M+++GV P+ +T I +I + G+ IH +++ S
Sbjct: 422 VNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNES 481
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
V N L+ MYA + K+F + R +ISWN +ISG+A+NG S+A ++ F + + +
Sbjct: 482 VMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLAD 541
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + T ++++++ A EDI++ G+ HS I+ G + D V +AL+ MY G I
Sbjct: 542 MQFDLVTLIALISSLSAIEDITV--GESVHSLAIRSGCNLDVSVANALITMYTNCGIIQA 599
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+++F+ + ++ A+++ ++ ++ ++ F M +P+ IT L++L +C
Sbjct: 600 GEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPLFYHMIKNDQKPNIITLLNLLPIC 657
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 210/419 (50%), Gaps = 13/419 (3%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T+ + C G ++H +V+ G V V AL+ MY++ G++ +RRVF
Sbjct: 141 DNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVF 200
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D M ++D +SWNA++SGY+ +G +EA AL +M + G R + S S
Sbjct: 201 DGMKSRDLISWNAMISGYSLNGCL-LEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVR 259
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+ G +H ++K G SV +S Y+ + +F + N++S +MIS+
Sbjct: 260 DAGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVC 319
Query: 236 R-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E A +F+ MR G+ PN VT + ++ S + G +HG+ IK +
Sbjct: 320 MQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQV 379
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN---GLSLAAVQAFFGV 347
SV + L++MY++ + + +F ++ + + WN+LISGY N + + +V+
Sbjct: 380 SVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRM--Q 437
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
I+ P+A T SV++ ED+ + G+ H++ ++ L+ + V +ALL MY G
Sbjct: 438 IEGVDPDALTVISVISKCRHTEDLHV--GKSIHAYAVRSRLELNESVMNALLAMYADCGQ 495
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ ++F+ + ++ +W IIS A +GD + + F +M ++ D +T +++++
Sbjct: 496 LSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALIS 554
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 165/333 (49%), Gaps = 16/333 (4%)
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
D+ +F AC L LGK++H ++ G+G +V V L+ Y+K + +VF
Sbjct: 141 DNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVF 200
Query: 218 RRMHDRNVISWTTMIS---MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
M R++ISW MIS +N +A K+M+ DG PN + +G++ +S +
Sbjct: 201 DGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRD 260
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G +H +K+ L + SV I+MYA F + S +F + ++S N++IS
Sbjct: 261 AGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCM 320
Query: 333 QNGLSLAAVQAFFGVIKESK-----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
Q+G A + FGV + + PN T S+L + + HG+ H +IK G
Sbjct: 321 QHG----AWEKAFGVFRLMRCKGLVPNLVTVVSILPC--CSNFFGINHGESVHGMVIKFG 374
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
L V SAL+ MY K G + + +F+ EKS+ W ++IS + + VM +
Sbjct: 375 LAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVR 434
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
M+ +GV PD++T +SV++ C +H G+ +
Sbjct: 435 RMQIEGVDPDALTVISVISKCRHTEDLHVGKSI 467
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 142/286 (49%), Gaps = 8/286 (2%)
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
+ + L++E+ G ++ TF +I A + + ++ G+ +H ++T V L
Sbjct: 126 RELLGLYREVCAFG--SDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTAL 183
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
+ MYA+ + S +VFD + R++ISWNA+ISGY+ NG L A +A + ++ +PNA
Sbjct: 184 LDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNA 243
Query: 356 YTFGSVLNAVGAAEDISLKH-GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
S++ V + ++ G H+ +K G+ D V A + MY G + S +
Sbjct: 244 ---SSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSL 300
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F+++ + + ++IS +HG +E F+ M KG+ P+ +T +S+L C I
Sbjct: 301 FHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGI 360
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ G + ++K + + S +V M ++G L+ A L +
Sbjct: 361 NHGESVHGMVIK-FGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSV 405
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+TF V+ A A L+ G+ H +++ G + V +ALLDMY K G + S+RVF
Sbjct: 143 FTFPPVIRACAAVS--CLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVF 200
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ + + +W A+IS + +G K+M+ G RP++ + + ++++ G+
Sbjct: 201 DGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRD 260
Query: 476 KGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G L LK D + P+ + M G L + L Q L
Sbjct: 261 AGDPLHAFALKSGVLGDESVTPA------FISMYAAFGHLSSSLSLFHQ-SLVDNLVSCN 313
Query: 531 SLLGACRIHGNVE 543
S++ C HG E
Sbjct: 314 SMISVCMQHGAWE 326
>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 203/669 (30%), Positives = 339/669 (50%), Gaps = 53/669 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y K G A +F ++ PD+VS++ ++S F K + +A+ RM + G+ + ++
Sbjct: 147 YIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSF 206
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
L+ C+ GLQ+H+L +K G V+V NALI +Y + G L A +FDEMP
Sbjct: 207 VAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQ 266
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMM--RKGLRLDHVSFTSAASACGHEKNLELG 178
+D SWN ++S + Y E L L ++ KG + D + ++ +AC G
Sbjct: 267 RDIASWNTMISSLVKGLSY--EKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQG 324
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED 238
++IH +I++G ++SV N ++ Y++C +F RM R++I+WT MI+ E
Sbjct: 325 REIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEF 384
Query: 239 -----AVSLFKEMR----------LDGVCPN---------------------DVTFIGLI 262
AV +F +M L G C N D T G+I
Sbjct: 385 GLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVI 444
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR--E 320
+A + ++ R IHG IK F S + LI M ++ M D++++F LS
Sbjct: 445 NACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGN 504
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESKP--NAYTFGSVLNAVGAAEDISLKHGQR 378
I ++I GYA+NGL A+ F+ E + F S+L G + G++
Sbjct: 505 SIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEV--GKQ 562
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H +K G ++ VG++++ MY K +I ++ + FN +W +I+ H
Sbjct: 563 IHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQ 622
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTV--CGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
+ + + ME G++PD+ITF+ +++ + ++ + R LF SM + +EP+ +H
Sbjct: 623 GDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEH 682
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
Y+ +V +LG G LEEAEEL+ ++P P +SV ++LL CR+H N +G+R+A ++ ME
Sbjct: 683 YASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGME 742
Query: 557 PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDN 616
P +YVL+SNLYA G W ++R+ M+ +G+RK SW + LH F + D
Sbjct: 743 PRDPSTYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIK--KQLHTFYARDK 800
Query: 617 THPRSEEIY 625
+HP+S +IY
Sbjct: 801 SHPQSNDIY 809
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 238/490 (48%), Gaps = 59/490 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVV------ 54
+ +Y K G D A+ +F+ + DI SWNT++S K LS+ + L V+
Sbjct: 245 IGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVK---GLSYEKALELFRVLNQNKGF 301
Query: 55 -FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR--------- 104
D T ST L+ C + G ++H+ ++ GL++ + V NA+I Y+R
Sbjct: 302 KADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAA 361
Query: 105 ------------WGRLVEARR----------VFDEMPNKDSVSWNAILSGYTQDGDYGVE 142
W ++ A +F++MP K+SVS+NA+L+G+ ++ + G++
Sbjct: 362 LFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNE-GLK 420
Query: 143 AILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMS 202
A+ + M+++G L + T +ACG LE+ +QIHG IK G+ ++ + L+
Sbjct: 421 ALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALID 480
Query: 203 TYSKCEVTGDANKVFRRMHDR--NVISWTTMI---SMN--REDAVSLFKEMRLDG-VCPN 254
SKC DA+++F+ + N I T+MI + N E+A+ LF + +G + +
Sbjct: 481 MCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLD 540
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
+V F ++ + G+ IH +KT F +E V N +I+MY++ ++ D+ K F+
Sbjct: 541 EVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFN 600
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISL 373
+ +++SWN LI+G + A+ + + K KP+A TF +++A L
Sbjct: 601 TMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLL 660
Query: 374 KHGQRCHSHIIKVGL--DSDPIVG--SALLDMYGKRGSIFESQRVFNETQEKSEFA-WTA 428
C S + + + D +P ++L+ + G G + E++ + N+ E + W A
Sbjct: 661 ---DECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRA 717
Query: 429 IISALARHGD 438
++ H +
Sbjct: 718 LLDGCRLHAN 727
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 191/397 (48%), Gaps = 45/397 (11%)
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+++L + +H +K+G TH+ GN +++ Y K + DA +VF M +V+S++ +IS
Sbjct: 119 DIDLARALHASILKLGEDTHL--GNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALIS 176
Query: 234 ----MNRE-DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+NRE +A+ LF MR+ G+ PN+ +F+ ++ A ++ G +H L IK +
Sbjct: 177 SFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQ 236
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
V N LI +Y + + + +FDE+ R+I SWN +IS + GLS F V+
Sbjct: 237 LVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVK-GLSYEKALELFRVL 295
Query: 349 KES---KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ K + +T ++L A + G+ H++ I++GL+++ V +A++ Y +
Sbjct: 296 NQNKGFKADQFTLSTLLTACARCH--ARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRC 353
Query: 406 GS------IFESQRV-------------------------FNETQEKSEFAWTAIISALA 434
GS +FE V FN+ EK+ ++ A+++
Sbjct: 354 GSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFC 413
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
++ + +N F M +G T V+ CG + R + ++K + +
Sbjct: 414 KNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIK-FGFRSNA 472
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
+ ++DM + GR+++A+ + + G S++Q+
Sbjct: 473 CIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQT 509
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 327/617 (52%), Gaps = 22/617 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLI----GVVF 55
MY + G A+ +F+ + D+V+W V+SG + + LS+ +RM G
Sbjct: 154 MYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARP 213
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ T + L C G LH VK G+ V ++L +MY++ +AR +F
Sbjct: 214 NSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILF 273
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
E+P KD VSW +++ Y + G + +A+ + M GL+ D V + + G++ +
Sbjct: 274 PELPEKDLVSWTSLIGAYCRAG-HAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKV 332
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
GK H ++ +G V +GN L+S Y+KC+ A VFR +H R+ SW++M+
Sbjct: 333 RGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAY 392
Query: 236 RE-----DAVSLFKEMRL----DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+ + L++EM+ + + + +G L + G+ H IK
Sbjct: 393 CKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRL-RLGQSAHCYSIKHLA 451
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
SV N LI+MY R + + K+F + +++++W+ALIS Y+ G S A+ +
Sbjct: 452 GENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQ 511
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ E KPN+ T SV+++ A +L+HG+ HSH+ VGL+ D + +AL+DMY K
Sbjct: 512 MLTEGVKPNSATLVSVISS--CANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKC 569
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++++F+ E+ W +IS HG+ + F ME V+P+S+TFL++L
Sbjct: 570 GQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAIL 629
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ KGR LF M ++Y +EP+ HY+CMVD+LG+ G L+EAE++V +P P
Sbjct: 630 SACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPD 688
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ +LLGAC++H N EMG R+A +P G Y+LMSN Y W + LR
Sbjct: 689 GGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDM 748
Query: 586 MKSKGVRKEVGFSWADV 602
MK+ GV K +G+S D+
Sbjct: 749 MKNHGVEKSIGWSTIDI 765
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/511 (28%), Positives = 257/511 (50%), Gaps = 19/511 (3%)
Query: 23 PDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQL 79
PD WN++L ++ D LS RM G T S + G +
Sbjct: 70 PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAV 129
Query: 80 HSLIVKFGL---DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
H+ V+FGL D V V ++L+ MY+R G + +A R+FDEMP +D V+W A++SG +
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCN 189
Query: 137 GDYGVEAILALIEMMRK----GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
G G E + L+ M+R G R + + S ACG L +G +HG +K G G
Sbjct: 190 GQCG-EGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGH 248
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMR 247
SV + L S Y+KC+ T DA +F + +++++SWT++I + E AV LF M
Sbjct: 249 CPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGME 308
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
G+ P++V L+ + V+ G+ H ++ NF + N LI+MYA+ + +
Sbjct: 309 ESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVD 368
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVG 366
+ VF L R+ SW++++ Y + GL L ++ + + ++ Y S+++ +
Sbjct: 369 IAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIIS 428
Query: 367 AAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ + L+ GQ H + IK + V +AL+ MYG+ G+ ++++F + K
Sbjct: 429 SCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVT 488
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W+A+IS+ + G + + + +M +GV+P+S T +SV++ C + G L S +
Sbjct: 489 WSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE-LIHSHV 547
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
KD +E + +VDM + G+L A ++
Sbjct: 548 KDVGLECDLSICTALVDMYMKCGQLGIARKM 578
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 224/456 (49%), Gaps = 24/456 (5%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAV 58
+MY K + A +F L D+VSW +++ + + ++ A+ L M G+ D V
Sbjct: 258 SMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEV 317
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
S L+ + G H+ IV+ V +GNALI+MY++ ++ A VF +
Sbjct: 318 VISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRML 377
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSF-------TSAASACGH 171
+D+ SW++++ Y + G L +E+ R+ D F S S+C
Sbjct: 378 HQRDTDSWSSMVVAYCKAG-----LDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSR 432
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
L LG+ H SIK G + SV N L+S Y +C A K+F + ++V++W+ +
Sbjct: 433 LGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSAL 492
Query: 232 ISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS + +DA+ L+ +M +GV PN T + +I + + ++ G +IH
Sbjct: 493 ISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGL 552
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ S+C L+ MY + + + K+FD + R++++WN +ISGY +G ++ A++ F
Sbjct: 553 ECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSM 612
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ + + KPN+ TF ++L+A A + G+ + + + L+ + + ++D+ GK
Sbjct: 613 MERGNVKPNSLTFLAILSACCHAGLV--DKGRELFTRMEEYSLEPNLKHYACMVDLLGKS 670
Query: 406 GSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G + E++ V + E W ++ A H ++E
Sbjct: 671 GHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFE 706
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 16/329 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD-DALSFALRMNLIGVVFDAVT 59
++MY K Q D A +F L+ D SW++++ + K+ D L + D
Sbjct: 358 ISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFE 417
Query: 60 YSTALSFCLDHEGFLFG-LQL----HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
Y T + G L+L H +K V NALI+MY R G AR++
Sbjct: 418 YDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKI 477
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F + KD V+W+A++S Y+ G + +A+L +M+ +G++ + + S S+C +
Sbjct: 478 FGMVKTKDVVTWSALISSYSHLG-HSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAA 536
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
LE G+ IH +G +S+ L+ Y KC G A K+F M +R+V++W MIS
Sbjct: 537 LEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISG 596
Query: 234 --MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
M+ E A+ LF M V PN +TF+ ++ A LV +GR + + E
Sbjct: 597 YGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL--FTRMEEYSLE 654
Query: 290 PSVCN--CLITMYARFESMQDSEKVFDEL 316
P++ + C++ + + +Q++E V +
Sbjct: 655 PNLKHYACMVDLLGKSGHLQEAEDVVSAM 683
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K GQ A +F+++ D+V+WN ++SG+ ++ AL M V ++
Sbjct: 563 VDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNS 622
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T+ LS C H G + G +L + + ++ L+ + ++ + + G L EA V
Sbjct: 623 LTFLAILSACC-HAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVS 681
Query: 117 EMP-NKDSVSWNAIL 130
MP D W +L
Sbjct: 682 AMPIEPDGGIWGTLL 696
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 5/184 (2%)
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+ + GL P + L+ Y G + F + F W +++ + R D+
Sbjct: 29 HALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASDF 88
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR--HLFDSMLKDYHIEPSPDHY 497
S ++ + M G RP T V + G + G H + + S
Sbjct: 89 ASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVA 148
Query: 498 SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
S +V M R G + +A L ++P + +++ C +G + GE ++ + +
Sbjct: 149 SSLVYMYARCGSVRDAVRLFDEMP-ERDVVAWTAVISGCVCNG--QCGEGLSYLVRMVRS 205
Query: 558 AGSG 561
AG G
Sbjct: 206 AGDG 209
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 202/615 (32%), Positives = 329/615 (53%), Gaps = 50/615 (8%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR---------- 113
L C+ G LHSL +K + Y N I +YS+ GRL AR+
Sbjct: 15 LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74
Query: 114 ---------------------VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR 152
+FD++P D VS+N ++S Y G+ L L MR
Sbjct: 75 FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE--TAPALGLFSGMR 132
Query: 153 K-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
+ GL +D + ++ +AC + L +G Q+H V++ G+ ++VSV N L++ Y K
Sbjct: 133 EMGLDMDGFTLSAVITACCDDVGL-IG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 212 DANKVFRRMHD-RNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI 265
DA +VF M R+ +SW +MI A+ LF+EM G+ + T ++ A
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 266 SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES-MQDSEKVFDELSCREIISW 324
+ + G HG IKT F V + LI +Y++ M D KVF+E++ +++ W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
N ++SGY+QN L F ++ +PN +F V++A S G++ HS
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPS--QGKQIHSL 368
Query: 383 IIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
+K + S+ I V +AL+ MY K G++ +++R+F+ E + + ++I+ A+HG
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEME 428
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
++ F+ M + + P SITF+SVL+ C G + +G + F+ M + ++IEP +HYSCM+
Sbjct: 429 SLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI 488
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG 561
D+LGR G+L EAE L+ ++P PG SLLGACR HGN+E+ + A+ ++++EP+ +
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAA 548
Query: 562 SYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRS 621
YV++SN+YA G WE VA +RK M+ +GV+K+ G SW +V +H F + D++HP
Sbjct: 549 PYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVK--KRIHVFVAEDSSHPMI 606
Query: 622 EEIYRMAECLGSEMK 636
+EIY E + +MK
Sbjct: 607 KEIYEFLEEMSGKMK 621
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 252/472 (53%), Gaps = 25/472 (5%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAVTY 60
Y K + A +F+ + PD+VS+NT++S + ++ AL M +G+ D T
Sbjct: 84 YAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTL 143
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S ++ C D G + QLHS+ V G DS V V NAL+T Y + G L +A+RVF M
Sbjct: 144 SAVITACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGG 201
Query: 121 -KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D VSWN+++ Y Q + G +A+ EM+R+GL +D + S +A ++L G
Sbjct: 202 IRDEVSWNSMIVAYGQHQE-GSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGL 260
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKC-EVTGDANKVFRRMHDRNVISWTTMI---SMN 235
Q HG IK G+ + VG+ L+ YSKC D KVF + + +++ W TM+ S N
Sbjct: 261 QFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQN 320
Query: 236 R---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP-S 291
EDA+ F++M+ G PND +F+ +I A S + +G+ IH L +K++ S S
Sbjct: 321 EEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRIS 380
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KE 350
V N LI MY++ ++QD+ ++FD ++ +S N++I+GYAQ+G+ + ++ F ++ ++
Sbjct: 381 VDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQ 440
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSI 408
P + TF SVL+A A ++ G + +++K + +P S ++D+ G+ G +
Sbjct: 441 IAPTSITFISVLSA--CAHTGRVEEGWN-YFNMMKEKFNIEPEAEHYSCMIDLLGRAGKL 497
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGDYE---SVMNQFKEMENKGVRP 456
E++ + W +++ A HG+ E NQ ++E P
Sbjct: 498 SEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 181/421 (42%), Gaps = 42/421 (9%)
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
F C E++L GK +H + IK N + YSKC A K F+ +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 222 DRNVISWTTMISMNREDAVSLFKEMRLDGV-----------------CPNDVTFIGLIHA 264
D NV S+ +I+ +++ L D + C +GL
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 265 ISIGNLVKEG-----------------RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
+ L +G +H + + + F S SV N L+T Y + +
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 308 DSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV 365
D+++VF + R+ +SWN++I Y Q+ A+ F +++ + +T SVL A
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK-RGSIFESQRVFNETQEKSEF 424
ED+S G + H +IK G + VGS L+D+Y K G + + ++VF E E
Sbjct: 251 TCLEDLS--GGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308
Query: 425 AWTAIISALARHGDY-ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
W ++S +++ ++ E + F++M+ G RP+ +F+ V++ C +G+ +
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
LK + ++ M + G L++A L ++ +S L S++ HG +E
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVS-LNSMIAGYAQHG-IE 426
Query: 544 M 544
M
Sbjct: 427 M 427
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 209/658 (31%), Positives = 354/658 (53%), Gaps = 44/658 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNL---NNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVV 54
++MY K G A F+ L + D+V+WN ++S F + + +AL M+ G
Sbjct: 49 ISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAP 108
Query: 55 F-DAVTYSTALSFCLDHEGFLFGLQ----LHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
++VT+ + L C+ E L L+ +H IV G++ E +V AL+ Y + G L
Sbjct: 109 PPNSVTFVSVLDSCV--EAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLD 166
Query: 110 EARRVF----DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
+A VF DE P+ V+ +A++S Q+G + E++ M +G + V+ S
Sbjct: 167 DAWEVFLRKSDEEPSTSLVTCSAMISACWQNG-WPQESLRLFYAMNLEGTKPSGVTLVSV 225
Query: 166 ASACGHEKNLELGKQIHGV---SIKMGYGTHVSV-GNVLMSTYSKCEVTGDANKVFRRMH 221
+AC L +G V ++++ T +V G L++TY++ A F +
Sbjct: 226 LNACSM---LPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQ 282
Query: 222 DRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISI---GNLVKE 273
+V+SW M + +A+ LF+ M L+GV P+ TFI + A +
Sbjct: 283 SPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAI 342
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC--REIISWNALISGY 331
G+ I L + + +V N + MYA+ S+ D+ VF+ +S R+ I+WN++++ Y
Sbjct: 343 GKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAY 402
Query: 332 AQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
+GL A + F + E KPN TF +VL+A + S+ G+ H+ ++ G +
Sbjct: 403 GHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDA--STSRTSIAQGREIHARVVSNGFE 460
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE--FAWTAIISALARHGDYESVMNQFK 447
SD ++ +ALL+MY K GS+ ++Q +F+++ E AWT++++ A++G E + F
Sbjct: 461 SDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFW 520
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
M+ +GVRP+ ITF+S LT C G + +G L M D+ I P+ H+SC+VD+LGR
Sbjct: 521 TMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRC 580
Query: 508 GRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMS 567
GRL+EAE+L+ + ++ + +LL AC+ +E GER A+ +M+++P + SY++++
Sbjct: 581 GRLDEAEKLLERTSQADVITWM-ALLDACKNSKELERGERCAERIMQLDPEVASSYIVLA 639
Query: 568 NLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
++YA G W A +RK M KG+R + G S +V LH FS+GD +HP+SEEIY
Sbjct: 640 SMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVN--QELHSFSAGDKSHPKSEEIY 695
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 226/467 (48%), Gaps = 33/467 (7%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP---NKDSVSWNAILSG 132
G ++HS I + +GNALI+MYS+ G L++A++ FD +P +D V+WNA++S
Sbjct: 26 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 85
Query: 133 YTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEK--NLELGKQIHGVSIKMG 189
+ ++G EA+ +M G + V+F S +C +LE + IHG + G
Sbjct: 86 FLRNGS-AREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAG 144
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR----NVISWTTMISMN-----REDAV 240
V L+ +Y K DA +VF R D ++++ + MIS ++++
Sbjct: 145 IEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESL 204
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISI------GNLVKEGRMIHGLCIKTNFLSEPSVCN 294
LF M L+G P+ VT + +++A S+ V E M + N L
Sbjct: 205 RLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLG-----T 259
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
L+T YAR + + FD + +++SWNA+ + Y Q+ A+ F ++ E +P
Sbjct: 260 TLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRP 319
Query: 354 NAYTFGSVLNAVGA-AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
+ TF + L A A + G+R S + + GL+ D V +A L+MY K GS+ +++
Sbjct: 320 SVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADAR 379
Query: 413 RVFNE--TQEKSEFAWTAIISALARHGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCG 469
VF + W ++++A HG + F+ ME K V+P+ +TF++VL
Sbjct: 380 AVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDAST 439
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
I +GR + ++ + E + +++M + G L++A+ +
Sbjct: 440 SRTSIAQGREIHARVVSN-GFESDTVIQNALLNMYAKCGSLDDAQAI 485
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 191/415 (46%), Gaps = 35/415 (8%)
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM---HDR 223
+AC NL G++IH + + +GN L+S YSKC DA + F R+ R
Sbjct: 15 NACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKR 74
Query: 224 NVISWTTMISM-----NREDAVSLFKEMRLDGV-CPNDVTFIGLIHAISIGNL--VKEGR 275
+V++W MIS + +A+ LF++M DG PN VTF+ ++ + L +++ R
Sbjct: 75 DVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVR 134
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF----DELSCREIISWNALISGY 331
IHG + E V L+ Y + S+ D+ +VF DE +++ +A+IS
Sbjct: 135 AIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISAC 194
Query: 332 AQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNA-----VGAAEDISLKHGQRCHSHIIK 385
QNG +++ F+ + ++ +KP+ T SVLNA VG+A L+
Sbjct: 195 WQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEV------ 248
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
V D ++G+ LL Y + + ++ F+ Q +W A+ +A +H +
Sbjct: 249 VSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVL 308
Query: 446 FKEMENKGVRPDSITFLSVLTVCGR---NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
F+ M +GVRP TF++ LT C G+ + S+L++ +E + ++
Sbjct: 309 FERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRI-QSLLEEAGLEGDTAVANATLN 367
Query: 503 MLGRVGRLEEAEELVGQI-PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
M + G L +A + +I P S+L A HG +G+ + ME
Sbjct: 368 MYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHG---LGKEAFELFQAME 419
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 126/228 (55%), Gaps = 11/228 (4%)
Query: 251 VCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
V PN I L++A S +GNL GR IH +F + N LI+MY++ S+ D+
Sbjct: 3 VRPNCHALIALVNACSCLGNLAA-GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61
Query: 310 EKVFDEL---SCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNA 364
++ FD L S R++++WNA+IS + +NG + A+Q F + + PN+ TF SVL++
Sbjct: 62 KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF----NETQE 420
A +SL+ + H I+ G++ + V +AL+D YGK GS+ ++ VF +E
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S +A+ISA ++G + + F M +G +P +T +SVL C
Sbjct: 182 TSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNAC 229
>gi|297827241|ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327342|gb|EFH57762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 669
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 207/645 (32%), Positives = 335/645 (51%), Gaps = 56/645 (8%)
Query: 42 LSFALRMNLIGVV----FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNA 97
L F ++ L G++ D Y + H L LQLH+ IV F + + ++ +
Sbjct: 3 LGFEIQRALQGLLNKAAVDGGAYGHLIQHFTRHRLPLHALQLHARIVVFSIAPDNFLASK 62
Query: 98 LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM------ 151
LI+ Y+R R +A VFDE+ +++ S+NA+L YT Y +A + +
Sbjct: 63 LISFYTRQNRFHQALHVFDEITVRNAFSYNALLIAYTSREMY-FDAFSLFLSWIGSSCYS 121
Query: 152 RKGLRLDHVSFT---SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
R D +S + A S C L +Q+HG I+ G + V VGN L++ Y+KC+
Sbjct: 122 SGAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGSDSDVFVGNGLITYYTKCD 181
Query: 209 VTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMR-LDGVCPNDVTFIGLI 262
A KVF M DR+V+SW +MIS + ED L+K M PN+VT I ++
Sbjct: 182 NIESARKVFDEMSDRDVVSWNSMISGYSQSGSFEDCKKLYKAMLGCSDFKPNEVTVISVL 241
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
A + + G +H I+ + + S+CN +I YA+ S+ + +FDE+S ++ +
Sbjct: 242 QACGQSSDLVFGMEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV 301
Query: 323 SWNALISGYAQNGLSLAAVQAFF---------------GVIKE----------------- 350
++ A+ISGY +GL A+ F G+++
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAVISGLMQNNHHEEVINSFREMIRCG 361
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
S+PN T S+L ++ + + LK G+ H+ I+ G D++ V ++++D Y K G +
Sbjct: 362 SRPNTVTLSSLLPSLTYSSN--LKGGKEIHAFAIRNGSDNNIYVTTSIIDNYAKLGFLLG 419
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+QRVF+ +++S WTAII+A A HGD +S + F +M+ G +PD++T +VL+
Sbjct: 420 AQRVFDNCKDRSLIVWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDNVTLTAVLSAFAH 479
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G K +H+FDSML Y+IEP +HY+CMV +L R G+L A E + ++P P V
Sbjct: 480 SGDSDKAQHIFDSMLTKYNIEPGVEHYACMVSVLSRAGKLSNAMEFISKMPIEPIAKVWG 539
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL + G+VE+ D L +MEP +G+Y +M+NLY + G WE ++R MK G
Sbjct: 540 ALLNGASVLGDVEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEVVRDKMKRIG 599
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
++K G SW + GL F + D++ RS+E+Y + E L M
Sbjct: 600 LKKIPGTSWIETN--KGLRSFIAKDSSCERSKEMYDIIEGLVESM 642
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 179/373 (47%), Gaps = 45/373 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVFD 56
+ Y K + A +F+ +++ D+VSWN+++SG+ +S D + + +
Sbjct: 174 ITYYTKCDNIESARKVFDEMSDRDVVSWNSMISGYSQSGSFEDCKKLYKAMLGCSDFKPN 233
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT + L C +FG+++H +++ + ++ + NA+I Y++ G L AR +FD
Sbjct: 234 EVTVISVLQACGQSSDLVFGMEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFD 293
Query: 117 EMPNKDSVSWNAILSGYTQDG------------------------------DYGVEAILA 146
EM KDSV++ AI+SGY G ++ E I +
Sbjct: 294 EMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAVISGLMQNNHHEEVINS 353
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
EM+R G R + V+ +S + + NL+ GK+IH +I+ G ++ V ++ Y+K
Sbjct: 354 FREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGSDNNIYVTTSIIDNYAK 413
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGL 261
A +VF DR++I WT +I+ + + A SLF +M+ G P++VT +
Sbjct: 414 LGFLLGAQRVFDNCKDRSLIVWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDNVTLTAV 473
Query: 262 IHAIS-IGNLVKEGRMIHGLCIKTNFLSEPSVCN--CLITMYARFESMQDSEKVFDELSC 318
+ A + G+ K + + K N EP V + C++++ +R + ++ + ++
Sbjct: 474 LSAFAHSGDSDKAQHIFDSMLTKYNI--EPGVEHYACMVSVLSRAGKLSNAMEFISKMPI 531
Query: 319 REIIS-WNALISG 330
I W AL++G
Sbjct: 532 EPIAKVWGALLNG 544
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/609 (31%), Positives = 337/609 (55%), Gaps = 19/609 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY K G ++A +F+ + N D VSW +++S + + D+AL +M+ G+ D+
Sbjct: 188 VNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDS 247
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+++AL C + G +H+ IV ++S+ +VG+ALI MY+R G + AR+ F++
Sbjct: 248 ITFTSALLACTK---LVDGKAIHARIVSSNMESD-FVGSALINMYARCGDVSSARQAFEK 303
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ NK V W ++++ Y Q Y EA+ M +G+ D V++ +A AC L+
Sbjct: 304 IQNKHVVCWTSLMTAYVQTCHYR-EALDLYGRMDHEGVHADGVTYVTALGACASLGALKE 362
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMISM-- 234
GK IH + G+ + V V L++ Y+KC A VF R+ RNV WT MIS
Sbjct: 363 GKAIHSRVFECGFQSLV-VHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYA 421
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ ++A+ L+ +M +G PN+ TF ++ A S ++ G IHG + S +
Sbjct: 422 QAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVA 481
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L+TMYA+ S++ ++ F+ ++++SWNA+I YAQ+GL A+ + + +
Sbjct: 482 VQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQG 541
Query: 352 K-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSIF 409
P+ T S L+A + SL+ G+ HS ++K S +V +AL++MYG+ G +
Sbjct: 542 VLPDEVTIASSLSACAISG--SLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLE 599
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ +F + ++ +WTA+ SA A+ G + V++ + EM G+RP+ ITF S+L C
Sbjct: 600 TARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCS 659
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G F M ++ + P +H+ CMVD+LGR GRL +AE LV +P P
Sbjct: 660 HAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAW 719
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LG+C+ H + + +R A + +++P + Y L+S+++ G + ++ MK
Sbjct: 720 LTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEM 779
Query: 590 GVRKEVGFS 598
G++K G S
Sbjct: 780 GLKKPPGQS 788
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 305/617 (49%), Gaps = 57/617 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVS-WNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
+ MY G+ A F N + V+ +N +LS + K+ + AL RM G D
Sbjct: 84 IQMYGNCGEIHLARAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPD 143
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNALITMYSRWGRLVEARRV 114
+TY L C ++H+ I++ + + + NAL+ MY + G + EAR+V
Sbjct: 144 KITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKV 203
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD + N+D+VSW +++S Y +G + EA+ +M G++ D ++FTSA AC
Sbjct: 204 FDGIKNRDAVSWTSMISSYANNG-FCDEALDLYQQMDADGIQPDSITFTSALLAC---TK 259
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L GK IH + + VG+ L++ Y++C A + F ++ +++V+ WT++++
Sbjct: 260 LVDGKAIHARIVSSNMESDF-VGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTA 318
Query: 235 -----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ +A+ L+ M +GV + VT++ + A + +KEG+ IH + F S
Sbjct: 319 YVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQS- 377
Query: 290 PSVCNCLITMYARFESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
V L+TMYA+ + + VF+ + R + W A+IS YAQ G + A++ + ++
Sbjct: 378 LVVHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMV 437
Query: 349 KE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
E ++PN YTF +VL A ++ D L+ G + H H+ L S+ V +AL+ MY K GS
Sbjct: 438 AEGTRPNEYTFSNVLAACSSSGD--LEAGMKIHGHVENSELASNVAVQNALVTMYAKCGS 495
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ F + K +W A+I A A+HG ++ ++ M ++GV PD +T S L+
Sbjct: 496 LELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSA 555
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C +G + GR + +LK+ S + +V+M GR GRLE A +
Sbjct: 556 CAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFE--------- 606
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+MG+R D L S+ M++ YA++G + V L M
Sbjct: 607 ---------------DMGQR--DVL---------SWTAMTSAYAQQGHADQVLDLYLEMV 640
Query: 588 SKGVR-KEVGFSWADVG 603
G+R E+ F+ VG
Sbjct: 641 LHGIRPNEITFTSILVG 657
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 244/494 (49%), Gaps = 23/494 (4%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVS-WNAILSGYT 134
G +H +++ G ++GN LI MY G + AR F + +V+ +N +LS Y
Sbjct: 61 GKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAVACYNQMLSAYG 120
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY--GT 192
++G + A+ M +G D +++ +C +L ++IH I+
Sbjct: 121 KNGLWN-RALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRD 179
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMR 247
++S+ N L++ Y KC +A KVF + +R+ +SWT+MIS ++A+ L+++M
Sbjct: 180 NLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMD 239
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
DG+ P+ +TF + A + LV +G+ IH + +N S+ V + LI MYAR +
Sbjct: 240 ADGIQPDSITFTSALLACT--KLV-DGKAIHARIVSSNMESD-FVGSALINMYARCGDVS 295
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGA 367
+ + F+++ + ++ W +L++ Y Q A+ +G + +A + + A+GA
Sbjct: 296 SARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALD-LYGRMDHEGVHADGV-TYVTALGA 353
Query: 368 AEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE-FA 425
+ +LK G+ HS + + G S +V +ALL MY K G + ++ VFN ++K +
Sbjct: 354 CASLGALKEGKAIHSRVFECGFQS-LVVHTALLTMYAKCGELDAARAVFNRVRQKRNVYC 412
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
WTA+ISA A+ G + + + +M +G RP+ TF +VL C +G + G + +
Sbjct: 413 WTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIH-GHV 471
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
++ + + + +V M + G LE A+ + G L +++GA HG +G
Sbjct: 472 ENSELASNVAVQNALVTMYAKCGSLELAKSAF-EASGRKDLVSWNAMIGAYAQHG---LG 527
Query: 546 ERIADALMKMEPAG 559
D M G
Sbjct: 528 REALDLYQTMTSQG 541
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 211/456 (46%), Gaps = 55/456 (12%)
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVIS 227
CG +L GK +H ++ G+G + +GN+L+ Y C A F+ + V
Sbjct: 52 CGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAVAC 111
Query: 228 WTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
+ M+S ++ A+ L+ M +G P+ +T+ ++ + S ++E R IH I
Sbjct: 112 YNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASII 171
Query: 283 KTNFL--SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+ + S+ N L+ MY + S++++ KVFD + R+ +SW ++IS YA NG A
Sbjct: 172 EAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEA 231
Query: 341 VQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
+ + + + +P++ TF S L A L G+ H+ I+ ++SD VGSAL+
Sbjct: 232 LDLYQQMDADGIQPDSITFTSALLAC-----TKLVDGKAIHARIVSSNMESD-FVGSALI 285
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
+MY + G + +++ F + Q K WT++++A + Y ++ + M+++GV D +
Sbjct: 286 NMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGV 345
Query: 460 TFLSVLTVCGRNGMIHKGRHLFD--------------SMLKDY--------------HIE 491
T+++ L C G + +G+ + ++L Y +
Sbjct: 346 TYVTALGACASLGALKEGKAIHSRVFECGFQSLVVHTALLTMYAKCGELDAARAVFNRVR 405
Query: 492 PSPDHY--SCMVDMLGRVGRLEEAEELVGQIPG---GPGLSVLQSLLGACRIHGNVEMGE 546
+ Y + M+ + G +EA EL Q+ P ++L AC G++E G
Sbjct: 406 QKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGM 465
Query: 547 RIADALMKMEPAGSGSYVLMSN----LYAEKGDWEM 578
+I + E A S V + N +YA+ G E+
Sbjct: 466 KIHGHVENSELA---SNVAVQNALVTMYAKCGSLEL 498
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 315/602 (52%), Gaps = 43/602 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVF-DAVT 59
Y G A +F++L++P + WN ++ + DAL M G + D T
Sbjct: 127 YAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYT 186
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ + C G+ +H + G S ++V N+L+ MY G++ AR+VF+ M
Sbjct: 187 FPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVML 246
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ VSWN ++SG+ Q+G EA+ MM + D + SA +CG+ K LELG
Sbjct: 247 KRSVVSWNTMISGWFQNGR-PEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGI 305
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM----- 234
++H + K + V N L+ YS+C +A+ VF +++VI+WT+MI+
Sbjct: 306 KVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNG 365
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
N + A++L M+LDGV PN VT L+ S C
Sbjct: 366 NAKSALALCPAMQLDGVVPNAVTLASLL----------------------------SACA 397
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKP 353
L MYA+ ++ S +VF + S + + WNAL+SG N L+ AV F +I+E +
Sbjct: 398 SLCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEA 457
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N TF SV+ A D LK HS++++ G S V + L+DMY K GS+ + +
Sbjct: 458 NHATFNSVIPAYAILAD--LKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHK 515
Query: 414 VFNE--TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+F+E +EK W+ +I+ HG E+ + F +M + G++P+ ITF SVL C
Sbjct: 516 IFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHR 575
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ G LF M+++Y P P+HY+C+VD+LGR GRL+EA +L+ +P S+ +
Sbjct: 576 GLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGA 635
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGAC IH NVE+GE A+ L ++EP +G+Y+L++N+YA G W+ +R M G+
Sbjct: 636 LLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGL 695
Query: 592 RK 593
RK
Sbjct: 696 RK 697
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 221/459 (48%), Gaps = 56/459 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+ MY G+ A +FN + +VSWNT++SG+ + ++AL+ M V D+
Sbjct: 226 LAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDS 285
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +AL C + G+++H L+ K L ++ V NAL+ MYSR G + EA VF E
Sbjct: 286 ATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAE 345
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
KD ++W ++++GY +G+ ++ LAL M+ G+ + V+ S SAC
Sbjct: 346 TKEKDVITWTSMINGYIMNGN--AKSALALCPAMQLDGVVPNAVTLASLLSACAS----- 398
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
L Y+KC + +VF + + + W ++S
Sbjct: 399 -----------------------LCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLI 435
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ RE AV LFK M ++ V N TF +I A +I +K+ +H +++ F+S+
Sbjct: 436 HNELARE-AVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKI 494
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCRE--IISWNALISGYAQNGLSLAAVQAFFGVI 348
+V LI MY++ S+ + K+FDE+ +E II W+ LI+GY +G AV F ++
Sbjct: 495 AVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMV 554
Query: 349 KES-KPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMY 402
+PN TF SVL+A G +D G ++I+ S P+ + ++D+
Sbjct: 555 HSGMQPNEITFTSVLHACSHRGLVDD-----GLTLFKYMIE-NYPSSPLPNHYTCVVDLL 608
Query: 403 GKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G+ G + E+ + +++ W A++ A H + E
Sbjct: 609 GRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVE 647
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 214/480 (44%), Gaps = 50/480 (10%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
+++ + L Y+ G + AR++FD++ + WNAI+ Y G + +A+ M+
Sbjct: 117 IHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKG-FHFDALRVFDSMI 175
Query: 152 RKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
G D +F AC L +G IHG ++ G+ +++ V N L++ Y C
Sbjct: 176 CSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKV 235
Query: 211 GDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI 265
G A +VF M R+V+SW TMIS E+A+++F M V P+ T + + +
Sbjct: 236 GLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSC 295
Query: 266 SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWN 325
++ G +H L K + + V N L+ MY+R + ++ VF E +++I+W
Sbjct: 296 GYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWT 355
Query: 326 ALISGYAQNG-----LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
++I+GY NG L+L GV+ PNA T S+L+A
Sbjct: 356 SMINGYIMNGNAKSALALCPAMQLDGVV----PNAVTLASLLSAC--------------- 396
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
++L MY K ++ S +VF +T +K W A++S L +
Sbjct: 397 ---------------ASLCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAR 441
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCM 500
+ FK M + V + TF SV+ + + +L +++ I + +
Sbjct: 442 EAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAV-ITGL 500
Query: 501 VDMLGRVGRLEEAEELVGQIPGG-PGLSVLQSLLGACRIHGNVEMGERIADALMK--MEP 557
+DM + G L+ A ++ +IP + V L+ +HG+ E + + ++ M+P
Sbjct: 501 IDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQP 560
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 8/248 (3%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNC---LITMYARFESMQDSEKVFDELSCREIISWNAL 327
+ + +++HG I + L P+ + L YA + + K+FD+LS + WNA+
Sbjct: 95 LNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAI 154
Query: 328 ISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
I Y G A++ F +I K P+ YTF V+ A +++ G H +
Sbjct: 155 IKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNV--GVLIHGRALV 212
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
G S+ V ++LL MY G + +++VFN ++S +W +IS ++G E +
Sbjct: 213 SGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAV 272
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLG 505
F M + V PDS T +S L CG + G + + K+ H++ + + +VDM
Sbjct: 273 FNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKN-HLQEKIEVRNALVDMYS 331
Query: 506 RVGRLEEA 513
R G ++EA
Sbjct: 332 RCGGIDEA 339
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/625 (31%), Positives = 333/625 (53%), Gaps = 33/625 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS---FALRMNLI------ 51
++ Y G AL +F+ + ++VSWN+++ F SD+ S F L ++
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF--SDNGFSEESFLLLGEMMEENGDG 286
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
+ D T T L C G +H VK LD E+ + NAL+ MYS+ G + A
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGD-YGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
+ +F NK+ VSWN ++ G++ +GD +G +L + + ++ D V+ +A C
Sbjct: 347 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
HE L K++H S+K + + V N +++Y+KC A +VF + + V SW
Sbjct: 407 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 466
Query: 231 MI---SMNREDAVSL--FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I + + + +SL +M++ G+ P+ T L+ A S ++ G+ +HG I+
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ V ++++Y + + +FD + + ++SWN +I+GY QNG A+ F
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 346 GVIKESKPNAYTFG------SVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSAL 398
++ +G S++ GA + SL+ G+ H++ +K L+ D + +L
Sbjct: 587 QMV--------LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSL 638
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+DMY K GSI +S +VFN +EKS +W A+I HG + + F+EM+ G PD
Sbjct: 639 IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 698
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
+TFL VLT C +G+IH+G D M + ++P+ HY+C++DMLGR G+L++A +V
Sbjct: 699 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 758
Query: 519 -QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
++ + + +SLL +CRIH N+EMGE++A L ++EP +YVL+SNLYA G WE
Sbjct: 759 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWE 818
Query: 578 MVAILRKGMKSKGVRKEVGFSWADV 602
V +R+ M +RK+ G SW ++
Sbjct: 819 DVRKVRQRMNEMSLRKDAGCSWIEL 843
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 265/533 (49%), Gaps = 22/533 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDAL-SFALRMNLIGVVFD 56
+ MY G D + +F+ L + ++ WN V+S + ++ D+ L +F ++ ++ D
Sbjct: 127 ITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPD 186
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
TY + C GL +H L+VK GL +V+VGNAL++ Y G + +A ++FD
Sbjct: 187 HFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFD 246
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK----GLRLDHVSFTSAASACGHE 172
MP ++ VSWN+++ ++ +G + E+ L L EMM + D + + C E
Sbjct: 247 IMPERNLVSWNSMIRVFSDNG-FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ + LGK +HG ++K+ + + N LM YSKC +A +F+ +++NV+SW TM+
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 233 -----SMNREDAVSLFKEMRLDG--VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+ + ++M G V ++VT + + + + + +H +K
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F+ V N + YA+ S+ +++VF + + + SWNALI G+AQ+ ++ A
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 346 GV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ I P+++T S+L+A + SL+ G+ H II+ L+ D V ++L +Y
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLK--SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + Q +F+ ++KS +W +I+ ++G + + F++M G++ I+ + V
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC-MVDMLGRVGRLEEAEEL 516
C + GR LK H+ +C ++DM + G + ++ ++
Sbjct: 604 FGACSLLPSLRLGREAHAYALK--HLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 229/497 (46%), Gaps = 35/497 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTA 63
+C++G DK+ D E S DA F L +G++ A
Sbjct: 53 FCETGDLDKSFRTVQEFVGDD-----------ESSSDA--FLLVREALGLLLQASGKRKD 99
Query: 64 LSFCLDHEGFLFGLQLHSLIV-KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
+ G ++H L+ L ++ + +ITMY+ G ++R VFD + +K+
Sbjct: 100 IEM---------GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN 150
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEKNLELGKQI 181
WNA++S Y+++ Y E + IEM+ L DH ++ AC ++ +G +
Sbjct: 151 LFQWNAVISSYSRNELYD-EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS 241
HG+ +K G V VGN L+S Y DA ++F M +RN++SW +MI + ++ S
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 242 -----LFKEMRLD----GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
L EM + P+ T + ++ + + G+ +HG +K E +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ MY++ + +++ +F + + ++SWN ++ G++ G + ++ +
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 353 PNAYTFGSVLNAVGAA-EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
++LNAV + L + H + +K + +V +A + Y K GS+ +
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
QRVF+ + K+ +W A+I A+ D ++ +M+ G+ PDS T S+L+ C +
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
Query: 472 GMIHKGRHLFDSMLKDY 488
+ G+ + +++++
Sbjct: 510 KSLRLGKEVHGFIIRNW 526
>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Vitis vinifera]
Length = 708
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/613 (31%), Positives = 327/613 (53%), Gaps = 15/613 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K G + A +F ++N + WN ++ G+ + ++L M G+ DA
Sbjct: 100 LNMYAKLGDIEDAERVFECMDNLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDA 159
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ AL CL FG Q+H LI++ + V N+L+ MY + G + A +VFD
Sbjct: 160 FTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDR 219
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +KD +SWN + +G +Q GD E ++M GL+ + V+F+ CG +L
Sbjct: 220 LQDKDIISWNTVFAGLSQ-GDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVS 278
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G Q H ++ + G SV + L++ +S+C A VF +++ + MIS
Sbjct: 279 GLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNL 338
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +A++LF + G+ ++ TF + A K GR +HG +K+ F S+ V
Sbjct: 339 NCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYV 398
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
C+ L+ Y F + DS + F+ + +++SW A+IS G S A+ +KE+
Sbjct: 399 CSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAI-GLLNRLKEAG 457
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+ + FGS+ N A + + + HS ++K+G ++ V SA++D Y K G I
Sbjct: 458 GKPDEFIFGSIFNC--CAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIEN 515
Query: 411 SQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++RVF++T + + ++ A A HG + F++M+ + P TF+SV++ C
Sbjct: 516 ARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACS 575
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G F SM DY ++PSPD+Y C+VD+ R G LE+A+ ++ +P P ++
Sbjct: 576 HLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIW 635
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+SLL CRIHGN E+GE A L+++ P +YVL+S +Y+E+G W A +RKGM +
Sbjct: 636 RSLLNGCRIHGNKELGEWAAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIER 695
Query: 590 GVRKEVGFSWADV 602
G+ K+ G SW ++
Sbjct: 696 GLWKDPGCSWIEI 708
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 162/569 (28%), Positives = 260/569 (45%), Gaps = 19/569 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVT 59
MY K G L +F + ++VSW V+SG ++ + L L M G+V +
Sbjct: 1 MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFA 60
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
C G GL +H +K G++ +VG++++ MY++ G + +A RVF+ M
Sbjct: 61 LGCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMD 120
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
N WNA++ GY Q YG E++ + M KG+ +D +F +A C NL G+
Sbjct: 121 NLVVGCWNAMIGGYAQ-CSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGR 179
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNRE 237
QIHG+ I+ G +V N LM Y K A KVF R+ D+++ISW T+ + +
Sbjct: 180 QIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGD 239
Query: 238 DAVSL---FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
DA + F ++ L G+ PN VTF L + G H L + E SV +
Sbjct: 240 DAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTS 299
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI M++R +M+ + VFD + I + N +ISGY N + A+ F + +
Sbjct: 300 SLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEA 359
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ TF S L A E+ L G++ H I+K G S V S+LL Y G + +S
Sbjct: 360 DECTFSSALEACFRTENQKL--GRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFE 417
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
FN + +W A+ISAL G + ++ G +PD F S+ C
Sbjct: 418 FFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAA 477
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ + + S++ E S ++D + G +E A + Q + + +++
Sbjct: 478 YRQTKSV-HSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMV 536
Query: 534 GACRIHG----NVEMGERIADALMKMEPA 558
A HG VE E++ L +EP+
Sbjct: 537 MAYAHHGLVREAVETFEKM--KLATLEPS 563
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/605 (31%), Positives = 319/605 (52%), Gaps = 51/605 (8%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G QLH+LI+ G + + L+T Y+ + L +A + + + WN ++S Y +
Sbjct: 112 GKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLISSYVR 171
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+G +G EA+ A +M KG+R D ++ S ACG + ++ GK++H G ++
Sbjct: 172 NGLHG-EALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLF 230
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS------MNREDAVSLFKEMRLD 249
V N L+S Y+K A +F M +R+ +SW TMIS M +E A LF +MR++
Sbjct: 231 VHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKE-AFELFGKMRVE 289
Query: 250 GVCPNDVTF------------------------------------IGLIHAISIGNLVKE 273
G+ N +T+ IGL IG +K
Sbjct: 290 GIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGA-IKL 348
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
GR IHG I++ + +V N LITMY+R + ++ + +F + II+WN+++SGY
Sbjct: 349 GREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTH 408
Query: 334 NGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSD 391
S A F ++ +PN T S+L A +L+HG+ H +I++ G
Sbjct: 409 MDRSEEASFLFREMLLSGIEPNYVTIASILPL--CARVANLQHGKEFHCYILRRAGFKDY 466
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
++ ++L+DMY + G + E++R+F+ + E +T++I+ G+ + F EM+
Sbjct: 467 LLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKK 526
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
+ ++PD +T ++VL+ C +G++ +G LF+ M Y I P +H++CMVD+ GR G L
Sbjct: 527 RHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLH 586
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
+A+E++ ++P P ++ +LLGACRIHGN E+GE A+ L++M P SG YVL++N+YA
Sbjct: 587 KAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYA 646
Query: 572 EKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
G W +A +R M+ GVRK G +W DVG G F D + P ++Y + E L
Sbjct: 647 AAGCWSKLAKVRTYMRDLGVRKAPGCAWVDVG--SGFFPFLVDDTSKPHVNKLYPLLEGL 704
Query: 632 GSEMK 636
MK
Sbjct: 705 TELMK 709
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 229/485 (47%), Gaps = 70/485 (14%)
Query: 13 ALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLD 69
A I N N + WN ++S + ++ +ALS +M G+ D TY + L C +
Sbjct: 147 AHTITENSNILHPLPWNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGE 206
Query: 70 HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAI 129
FG +LH+ I L ++V N+L++MY++ G L AR +F+ M +D VSWN +
Sbjct: 207 KLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTM 266
Query: 130 LSGYTQDGDY---------------------------------GVEAILALIEMMRK-GL 155
+SGY G + E L L+ MR G+
Sbjct: 267 ISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGI 326
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
+D V+ AC H ++LG++IHG +I+ Y +V N L++ YS+C+ A
Sbjct: 327 DMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYN 386
Query: 216 VFRRMHDRNVISWTTMIS----MNR-EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
+F+ +N+I+W +M+S M+R E+A LF+EM L G+ PN VT ++ +
Sbjct: 387 LFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVAN 446
Query: 271 VKEGRMIHGLCI-KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALIS 329
++ G+ H + + F + N L+ MYAR + +++++FD +S R+ +++ +LI+
Sbjct: 447 LQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIA 506
Query: 330 GYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
GY G A++ F + K KP+ T +VL+A HS ++ G+
Sbjct: 507 GYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACS-------------HSGLVTEGI 553
Query: 389 DSDPIVGSA------------LLDMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALAR 435
++ SA ++D++G+ G + +++ + + A W ++ A
Sbjct: 554 KLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRI 613
Query: 436 HGDYE 440
HG+ E
Sbjct: 614 HGNAE 618
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 169/364 (46%), Gaps = 46/364 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K+G+ A C+F N+ D VSWNT++SG+ +A +M + G+ +
Sbjct: 236 VSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNI 295
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD----------------------SEVY-- 93
+T++T C+ F L+L S + +G+D E++
Sbjct: 296 ITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGS 355
Query: 94 -----------VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVE 142
V NALITMYSR L A +F K+ ++WN++LSGYT D E
Sbjct: 356 AIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTH-MDRSEE 414
Query: 143 AILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSI-KMGYGTHVSVGNVLM 201
A EM+ G+ ++V+ S C NL+ GK+ H + + G+ ++ + N L+
Sbjct: 415 ASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLV 474
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDV 256
Y++ +A ++F + R+ +++T++I+ +A+ LF EM+ + P+ V
Sbjct: 475 DMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHV 534
Query: 257 TFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
T + ++ A S LV EG ++ + + C++ ++ R + ++++
Sbjct: 535 TMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITR 594
Query: 316 LSCR 319
+ R
Sbjct: 595 MPYR 598
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 111/222 (50%), Gaps = 4/222 (1%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+ +G+ +H L I F P + L+T Y F+ + D+ + + + + WN LIS
Sbjct: 109 LSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLISS 168
Query: 331 YAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
Y +NGL A+ A+ + K +P+ +T+ SVL A G DI+ G++ H+ I L
Sbjct: 169 YVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAF--GKKLHASINASCLG 226
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
+ V ++L+ MY K G + ++ +F E+ + +W +IS A G ++ F +M
Sbjct: 227 WNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKM 286
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
+G+ + IT+ ++ C ++G + L M + Y I+
Sbjct: 287 RVEGIELNIITWNTIAGGCVQSGNFEEALELLSHM-RSYGID 327
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SL G++ H+ II +G + PI+ L+ Y + ++ + + W +IS
Sbjct: 108 SLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLIS 167
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+ R+G + ++ +K+M +KG+RPD T+ SVL CG I G+ L S+
Sbjct: 168 SYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASI 220
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 199/643 (30%), Positives = 326/643 (50%), Gaps = 85/643 (13%)
Query: 86 FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP--NKDSVSWNAILSGYTQDGDYGVEA 143
F D +L+ Y+ RL A FD +P +D+V NA++S Y + + A
Sbjct: 82 FCADPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYAR-ASHAAPA 140
Query: 144 ILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGK--QIHGVSIKMGYGTHVSVGNVL 200
+ ++ G LR D SFT+ SA GH N+ + Q+H +K G G +SV N L
Sbjct: 141 VAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNAL 200
Query: 201 MSTYSKCE---VTGDANKVFRRMHDRNVISWTTMI--SMNRED----------------- 238
++ Y KCE T DA KV M +++ ++WTTM+ + R D
Sbjct: 201 VALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDV 260
Query: 239 -----------------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
A LF+ M L+ V ++ TF ++ A + L G+ +HG
Sbjct: 261 VWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQI 320
Query: 282 IK--TNFLSEPS--VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS 337
I+ NF+ E + V N L+T Y++ ++ + ++FD ++ ++++SWN ++SGY ++
Sbjct: 321 IRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCL 380
Query: 338 LAAVQAF------------------------------FGVIKES--KPNAYTFGSVLNAV 365
AV+ F F ++ KP YT+ + A
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAAC 440
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
G E +LKHG++ H HI+++G + G+AL+ MY + G++ E+ +F +
Sbjct: 441 G--ELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVS 498
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W A+ISAL +HG + F M +G+ PD I+FL+VLT C +G++ +G F+SM
Sbjct: 499 WNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMK 558
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+D+ I P DHY+ ++D+LGR GR+ EA +L+ +P P S+ +++L CR G++E+G
Sbjct: 559 RDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELG 618
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
AD L KM P G+Y+L+SN Y+ G W A +RK M+ +GV+KE G SW + G
Sbjct: 619 AHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAG-- 676
Query: 606 DGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+ +H F GD HP + E+Y+ E +G++M+ L + + L
Sbjct: 677 NKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVL 719
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 195/450 (43%), Gaps = 100/450 (22%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGR---LVEARRVFDEMPNKDSVSWNAILSGYT 134
QLH ++K G + V NAL+ +Y + +AR+V DEMPNKD ++W ++ GY
Sbjct: 180 QLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYV 239
Query: 135 QDGDYG------------------------------VEAILALIEMMRKGLRLDHVSFTS 164
+ GD G VEA M+ + + LD +FTS
Sbjct: 240 RRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTS 299
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYG----THVSVGNVLMSTYSKCEVTGDANKVFRRM 220
SAC + GK +HG I++ + V N L++ YSKC A ++F M
Sbjct: 300 VLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNM 359
Query: 221 HDRNVISWTTMIS-------MNR-----------------------------EDAVSLFK 244
++V+SW T++S +++ EDA+ LF
Sbjct: 360 TLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFN 419
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
+MR + V P D T+ G I A +K G+ +HG ++ F S N LITMYAR
Sbjct: 420 KMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCG 479
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLN 363
+++++ +F + + +SWNA+IS Q+G A++ F ++ E P+ +F +VL
Sbjct: 480 AVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLT 539
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGL--------DSDPIVG----SALLDMYGKRGSIFES 411
A HS ++ G D I G + L+D+ G+ G I E+
Sbjct: 540 ACN-------------HSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEA 586
Query: 412 QRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ + E + W AI+S GD E
Sbjct: 587 RDLIKTMPFEPTPSIWEAILSGCRTSGDME 616
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 172/376 (45%), Gaps = 44/376 (11%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y + G A +F ++ V WN ++SG+ S +A RM L V D T+
Sbjct: 238 YVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTF 297
Query: 61 STALSFCLDHEGFLFGLQLHSLIVK----FGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ LS C + F G +H I++ F ++ + V NAL+T YS+ G + ARR+FD
Sbjct: 298 TSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFD 357
Query: 117 EMPNKDSVSWNAILSGYTQD------------------------------GDYGVEAILA 146
M KD VSWN ILSGY + G + +A+
Sbjct: 358 NMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKL 417
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
+M + ++ ++ A +ACG L+ GKQ+HG +++G+ S GN L++ Y++
Sbjct: 418 FNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYAR 477
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGL 261
C +A+ +F M + + +SW MIS + +A+ LF M +G+ P+ ++F+ +
Sbjct: 478 CGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTV 537
Query: 262 IHAISIGNLVKEG-RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
+ A + LV EG R + + LI + R + ++ + +
Sbjct: 538 LTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEP 597
Query: 321 IIS-WNALISGYAQNG 335
S W A++SG +G
Sbjct: 598 TPSIWEAILSGCRTSG 613
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 98/205 (47%), Gaps = 35/205 (17%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---------------------- 38
+ Y K G A IF+N+ D+VSWNT+LSG+ +S
Sbjct: 340 VTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWM 399
Query: 39 ------------DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKF 86
+DAL +M V TY+ A++ C + G QLH IV+
Sbjct: 400 VMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQL 459
Query: 87 GLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILA 146
G + GNALITMY+R G + EA +F MPN DSVSWNA++S Q G +G EA+
Sbjct: 460 GFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHG-HGREALEL 518
Query: 147 LIEMMRKGLRLDHVSFTSAASACGH 171
M+ +G+ D +SF + +AC H
Sbjct: 519 FDRMVAEGIYPDRISFLTVLTACNH 543
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY + G +A +F + N D VSWN ++S + +AL RM G+ D
Sbjct: 472 ITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDR 531
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
+++ T L+ C L EGF + S+ FG+ LI + R GR+ EAR
Sbjct: 532 ISFLTVLTACNHSGLVDEGFRY---FESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARD 588
Query: 114 VFDEMPNKDSVS-WNAILSGYTQDGD--YGVEAILALIEM 150
+ MP + + S W AILSG GD G A L +M
Sbjct: 589 LIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKM 628
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 215/696 (30%), Positives = 364/696 (52%), Gaps = 66/696 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSF---------ALRMNLI 51
MN Y K G A +F+ + D+ SWNT++S + S A S+ L L+
Sbjct: 94 MNGYAKQGSLSDAEELFDRMPRRDVASWNTLMS--DTSRPAGSWMSCGALGCRELAPQLL 151
Query: 52 GVVFDAVTY-----STALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRW 105
G+ + + TAL G++ F +L S I + ++ N+++ Y++
Sbjct: 152 GLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIER----PTIFCRNSMLAGYAKL 207
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
+ A F++M +D VSWN +++ +Q G EA+ ++EM RKG+RLD ++TS+
Sbjct: 208 YGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVR-EALGLVVEMHRKGVRLDSTTYTSS 266
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
+AC +L GKQ+H I+ V + L+ Y+KC +A +VF + DRN
Sbjct: 267 LTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNS 326
Query: 226 ISWTTMI--SMNRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+SWT +I S+ E +V LF +MR + + + LI + GR +H L
Sbjct: 327 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 386
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
C+K+ V N LI++YA+ +Q++E VF +S R+I+SW ++I+ Y+Q G + A
Sbjct: 387 CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKA 446
Query: 341 VQAFFGVIKESKPNAYTFGSVLNAV---GAAED---------------------ISL--- 373
+ F G+ + NA T+ ++L A GA ED ++L
Sbjct: 447 REFFDGM---ATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRG 503
Query: 374 -------KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
K G + H +K GL + V +A + MY K G I E+Q++F+ K +W
Sbjct: 504 CADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSW 563
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
A+I+ ++HG + F +M +KG +PD I++++VL+ C +G++ +G+ FD M +
Sbjct: 564 NAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTR 623
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
+ I P +H+SCMVD+LGR G L EA++L+ ++P P V +LL AC+IHGN E+ E
Sbjct: 624 VHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAE 683
Query: 547 RIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDID 606
A + +++ SGSY+L++ +Y++ G + A +RK M+ KG++K G+SW +V +
Sbjct: 684 LAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVE--N 741
Query: 607 GLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKR 642
+H F + D +HP+ I + L ++ +L R
Sbjct: 742 KVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVR 777
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 217/505 (42%), Gaps = 59/505 (11%)
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD-EMPNK 121
AL C LH +V GL S V++ N L+ Y G L +ARR+ ++
Sbjct: 26 ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 85
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS----------ACGH 171
+ ++ N +++GY + G E+ + R D S+ + S +CG
Sbjct: 86 NVITHNIMMNGYAKQGSLSDAE-----ELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGA 140
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR------------ 219
EL Q+ G+ K + V L+ + +C A+++F +
Sbjct: 141 LGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSM 200
Query: 220 -------------------MHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPND 255
M +R+V+SW MI+ + +A+ L EM GV +
Sbjct: 201 LAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDS 260
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
T+ + A + + G+ +H I++ +P V + LI +YA+ S +++++VF+
Sbjct: 261 TTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNS 320
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLK 374
L R +SW LI G Q +V+ F + E + + ++++ D+ L
Sbjct: 321 LQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCL- 379
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G++ HS +K G + +V ++L+ +Y K G + ++ VF+ E+ +WT++I+A +
Sbjct: 380 -GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYS 438
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
+ G+ F M + ++IT+ ++L ++G G ++ +ML + P
Sbjct: 439 QIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDW 494
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQ 519
Y + +G + ++++G
Sbjct: 495 VTYVTLFRGCADIGANKLGDQIIGH 519
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/625 (31%), Positives = 333/625 (53%), Gaps = 33/625 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS---FALRMNLI------ 51
++ Y G AL +F+ + ++VSWN+++ F SD+ S F L ++
Sbjct: 584 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF--SDNGFSEESFLLLGEMMEENGDG 641
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
+ D T T L C G +H VK LD E+ + NAL+ MYS+ G + A
Sbjct: 642 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 701
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGD-YGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
+ +F NK+ VSWN ++ G++ +GD +G +L + + ++ D V+ +A C
Sbjct: 702 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 761
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
HE L K++H S+K + + V N +++Y+KC A +VF + + V SW
Sbjct: 762 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 821
Query: 231 MI---SMNREDAVSL--FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I + + + +SL +M++ G+ P+ T L+ A S ++ G+ +HG I+
Sbjct: 822 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 881
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ V ++++Y + + +FD + + ++SWN +I+GY QNG A+ F
Sbjct: 882 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 941
Query: 346 GVIKESKPNAYTFG------SVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSAL 398
++ +G S++ GA + SL+ G+ H++ +K L+ D + +L
Sbjct: 942 QMV--------LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSL 993
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+DMY K GSI +S +VFN +EKS +W A+I HG + + F+EM+ G PD
Sbjct: 994 IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 1053
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
+TFL VLT C +G+IH+G D M + ++P+ HY+C++DMLGR G+L++A +V
Sbjct: 1054 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 1113
Query: 519 -QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
++ + + +SLL +CRIH N+EMGE++A L ++EP +YVL+SNLYA G WE
Sbjct: 1114 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWE 1173
Query: 578 MVAILRKGMKSKGVRKEVGFSWADV 602
V +R+ M +RK+ G SW ++
Sbjct: 1174 DVRKVRQRMNEMSLRKDAGCSWIEL 1198
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 265/533 (49%), Gaps = 22/533 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDAL-SFALRMNLIGVVFD 56
+ MY G D + +F+ L + ++ WN V+S + ++ D+ L +F ++ ++ D
Sbjct: 482 ITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPD 541
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
TY + C GL +H L+VK GL +V+VGNAL++ Y G + +A ++FD
Sbjct: 542 HFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFD 601
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK----GLRLDHVSFTSAASACGHE 172
MP ++ VSWN+++ ++ +G + E+ L L EMM + D + + C E
Sbjct: 602 IMPERNLVSWNSMIRVFSDNG-FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 660
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ + LGK +HG ++K+ + + N LM YSKC +A +F+ +++NV+SW TM+
Sbjct: 661 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 720
Query: 233 -----SMNREDAVSLFKEMRLDG--VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+ + ++M G V ++VT + + + + + +H +K
Sbjct: 721 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 780
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F+ V N + YA+ S+ +++VF + + + SWNALI G+AQ+ ++ A
Sbjct: 781 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 840
Query: 346 GV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ I P+++T S+L+A + SL+ G+ H II+ L+ D V ++L +Y
Sbjct: 841 QMKISGLLPDSFTVCSLLSACSKLK--SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 898
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + Q +F+ ++KS +W +I+ ++G + + F++M G++ I+ + V
Sbjct: 899 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 958
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC-MVDMLGRVGRLEEAEEL 516
C + GR LK H+ +C ++DM + G + ++ ++
Sbjct: 959 FGACSLLPSLRLGREAHAYALK--HLLEDDAFIACSLIDMYAKNGSITQSSKV 1009
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 229/497 (46%), Gaps = 35/497 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTA 63
+C++G DK+ D E S DA F L +G++ A
Sbjct: 408 FCETGDLDKSFRTVQEFVGDD-----------ESSSDA--FLLVREALGLLLQASGKRKD 454
Query: 64 LSFCLDHEGFLFGLQLHSLIV-KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
+ G ++H L+ L ++ + +ITMY+ G ++R VFD + +K+
Sbjct: 455 IEM---------GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN 505
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEKNLELGKQI 181
WNA++S Y+++ Y E + IEM+ L DH ++ AC ++ +G +
Sbjct: 506 LFQWNAVISSYSRNELYD-EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS 241
HG+ +K G V VGN L+S Y DA ++F M +RN++SW +MI + ++ S
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624
Query: 242 -----LFKEMRLD----GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
L EM + P+ T + ++ + + G+ +HG +K E +
Sbjct: 625 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ MY++ + +++ +F + + ++SWN ++ G++ G + ++ +
Sbjct: 685 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 744
Query: 353 PNAYTFGSVLNAVGAA-EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
++LNAV + L + H + +K + +V +A + Y K GS+ +
Sbjct: 745 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 804
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
QRVF+ + K+ +W A+I A+ D ++ +M+ G+ PDS T S+L+ C +
Sbjct: 805 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 864
Query: 472 GMIHKGRHLFDSMLKDY 488
+ G+ + +++++
Sbjct: 865 KSLRLGKEVHGFIIRNW 881
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 192/610 (31%), Positives = 323/610 (52%), Gaps = 18/610 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + DIVSWN+++S + +DA + M G+ + + + + C
Sbjct: 169 VFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERD 228
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
FGL +H L++K GLDS V +GNAL+ MY ++G L + RVF+ M K+ VSWN+ L
Sbjct: 229 EGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGC 288
Query: 133 YTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
+ G + E +L + +M + + V+ +S A LGK++HG SI+
Sbjct: 289 FAHAGFH--EDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAME 346
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM 246
+ + + N LM Y+K A+ +F + RNV+SW MI+ +A SL EM
Sbjct: 347 SDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEM 406
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+ +G CPN T + L+ A S VK G+ IH I + +S+ V N LI +YA+ +
Sbjct: 407 QKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQL 466
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVG 366
++ +FD S ++ +S+N LI GY+Q+ ++ F + S Y S + +
Sbjct: 467 SVAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLHLFQQM--RSAGIEYDAVSFMGCLS 523
Query: 367 AAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
A ++S K G+ H +++ L++ P + ++LLD+Y K G + + ++FN K +
Sbjct: 524 ACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVAS 583
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W +I HG + F M++ GV D +++++VL+ C G++ +G+ F M+
Sbjct: 584 WNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMI 643
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+I+P HY+CMVD+LGR G+L E+ E++ +P V +LLG+CRIHG++E+
Sbjct: 644 AQ-NIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELA 702
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
A+ L +++P SG Y L+ N+Y+E G W ++ MKS+ V+K +SW G
Sbjct: 703 RLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANEIKTLMKSRKVQKNPAYSWVQSG-- 760
Query: 606 DGLHGFSSGD 615
+ L F GD
Sbjct: 761 NKLQAFLVGD 770
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 261/489 (53%), Gaps = 20/489 (4%)
Query: 76 GLQLHSLIVKFGLD-SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
G +LH+ ++ GL ++V+ GN L+T Y+ GR +ARRVFDEMP +D VSWN+++S
Sbjct: 130 GAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALL 189
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
+G +A A++ MMR G+ ++ S S ACG E++ G +HG+ +K G + V
Sbjct: 190 TNGMLE-DAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVV 248
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLD 249
++GN L+ Y K + +VF M ++N +SW + + + ED + +F+ M
Sbjct: 249 NLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEH 308
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
V P VT L+ A+ G+ +HG I+ S+ + N L+ MYA+F ++ +
Sbjct: 309 EVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKA 368
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK----PNAYTFGSVLNAV 365
+F+ + R ++SWNA+I+ AQNG A +AF VI+ K PN++T ++L A
Sbjct: 369 SAIFENIEGRNVVSWNAMIANLAQNG---AETEAFSLVIEMQKNGECPNSFTLVNLLPA- 424
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ S+K G++ H+ I L SD V +AL+D+Y K G + +Q +F+ + EK + +
Sbjct: 425 -CSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRS-EKDDVS 482
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
+ +I ++ ++ F++M + G+ D+++F+ L+ C +G+ + ++
Sbjct: 483 YNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLV 542
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+ + P + ++D+ + G L A ++ +I S +LG +HG +++
Sbjct: 543 RRL-LNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGY-GMHGQIDVA 600
Query: 546 ERIADALMK 554
+ D LMK
Sbjct: 601 FELFD-LMK 608
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 176/377 (46%), Gaps = 36/377 (9%)
Query: 169 CGHEKNLELGKQIHGVSIKMGYGT-HVSVGNVLMSTYSKCEVTGDANKVFRR--MHDRNV 225
CG N L ++ H S+ G T + + L+ +Y+ A + R + R+
Sbjct: 14 CG--GNSLLLRRAHAASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSA 71
Query: 226 ISWTTMISMNR--------EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV-----K 272
W S++R +A+ ++ M GV P+D TF +HA + +
Sbjct: 72 FLWN---SLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPA 128
Query: 273 EGRMIHGLCIKTN-FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
+G +H ++ L++ N L+T YA D+ +VFDE+ R+I+SWN+L+S
Sbjct: 129 KGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSAL 188
Query: 332 AQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
NG+ A +A G+++ P N + SV+ A G D G H ++K GLDS
Sbjct: 189 LTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGF--GLSVHGLVLKSGLDS 246
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
+G+AL+DMYGK G + S RVFN QEK+E +W + + A G +E V+ F+ M
Sbjct: 247 VVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMS 306
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLF-----DSMLKDYHIEPSPDHYSCMVDMLG 505
V P S+T S+L G H G+ + +M D I S ++DM
Sbjct: 307 EHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANS------LMDMYA 360
Query: 506 RVGRLEEAEELVGQIPG 522
+ G LE+A + I G
Sbjct: 361 KFGCLEKASAIFENIEG 377
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 187/585 (31%), Positives = 324/585 (55%), Gaps = 22/585 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD----DALSFALRMNLIGVVFD 56
+ MY + ++ + +F+ ++ D VSW+T++ + D DAL M GV+
Sbjct: 358 LGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPK 417
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ S L C G +H+ +++ GL+ ++ VG +L+ MY++ G + EAR+VFD
Sbjct: 418 TLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDL-VGISLVNMYAKCGTVGEARKVFD 476
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ N+ + WN++++ Y + + EA+ EM +G+ D ++F + +AC + +LE
Sbjct: 477 RINNRSRILWNSMITAYQEKDPH--EALHLFREMQPEGVSPDRITFMTVLNACVNAADLE 534
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+ IH + G+ V V L + Y+KC G+A VF M R+V+SW MI+
Sbjct: 535 NGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYV 594
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E A+SL M+L+G+ P+ TF L++A S N + +GR IH ++ ++
Sbjct: 595 QGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIV 654
Query: 292 VCNCLITMYARFESMQDSEKVFDELSC------REIISWNALISGYAQNGLSLAAVQAFF 345
+ LITMYA S+ ++ ++FD + R++ W ++I+ Y Q+G A++ +
Sbjct: 655 MVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYE 714
Query: 346 GV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ ++ + + TF SVLNA D L+ GQ H+ +++ GL +D V ++++ MYGK
Sbjct: 715 QMHSRQVEADRVTFISVLNACAHLSD--LRQGQAIHARVMRRGLATDVAVANSIVFMYGK 772
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GS E+ VF +T+ K WTA+I++ ARHG E + F+ + G+ ++TF+++
Sbjct: 773 CGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAM 832
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L+ C G+I +G F SM + IEP+ +H+SC+VD+L R G L AEE + ++P
Sbjct: 833 LSACSHVGLIEEGCEFFASM-AELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAA 891
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNL 569
VL +LL ACR+HG+VE R+A+ L ++P YV +SN+
Sbjct: 892 NTIVLTALLAACRVHGDVERARRVAEKLEALDPESEAPYVTLSNI 936
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 285/531 (53%), Gaps = 29/531 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFD 56
+NMY K G D A+ F + D+VSW TV+ G D S +L+ M L G +
Sbjct: 52 INMYVKCGCLDGAVQTFARMKRRDVVSW-TVMIGAYSQDGKFSLSLQLFREMLLEGTAPN 110
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR-RVF 115
+VT+ + LS C G Q+H+L+V+ L+S V V N+L+ MYSR ++R + F
Sbjct: 111 SVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTF 170
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M +D VSW ++ Y+QDG + + +I EM+ +G + V+F S S C L
Sbjct: 171 ARMKRRDVVSWTVMIGAYSQDGKFSL-SIQLFREMLLEGTAPNSVTFVSILSGCEAPSLL 229
Query: 176 ELGKQIHGVSIKMGYGTHVSVG--NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
E G+QIH + ++ +H+ +G N+ ++ Y KC A + F RM R+V+SWT MI
Sbjct: 230 EQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIG 289
Query: 234 MNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+D ++ LF+EM L+G PN VTF+ ++ +L+++GR IH L ++++ S
Sbjct: 290 AYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLES 349
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI------SGYAQNGLSLAAVQ 342
V N L+ MY+R S +DS +FD +S R+ +SW+ +I + ++ L L
Sbjct: 350 HVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSM 409
Query: 343 AFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
GV+ P VL A G+ + LK G+ H+H+I+ GL+ D +VG +L++MY
Sbjct: 410 LHEGVM----PKTLALSMVLEACGSLAE--LKGGKLVHAHVIESGLEGD-LVGISLVNMY 462
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K G++ E+++VF+ +S W ++I+A +E+ ++ F+EM+ +GV PD ITF+
Sbjct: 463 AKCGTVGEARKVFDRINNRSRILWNSMITAYQEKDPHEA-LHLFREMQPEGVSPDRITFM 521
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+VL C + GR + ++ D + + +M + G L EA
Sbjct: 522 TVLNACVNAADLENGRTIHTRIV-DSGFAADVRVATALFNMYAKCGSLGEA 571
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/487 (28%), Positives = 248/487 (50%), Gaps = 23/487 (4%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
M+ G+ D V T L+ C G + + L+ ++ V N I MY + G
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
L A + F M +D VSW ++ Y+QDG + + L EM+ +G + V+F S S
Sbjct: 61 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQL-FREMLLEGTAPNSVTFVSILS 119
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN-KVFRRMHDRNVI 226
C LE G+QIH + ++ +HV V N L+ YS+C D+ + F RM R+V+
Sbjct: 120 GCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVV 179
Query: 227 SWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
SWT MI +D ++ LF+EM L+G PN VTF+ ++ +L+++GR IH L
Sbjct: 180 SWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALV 239
Query: 282 IKTNFLS--EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
++++ S + V N I MY + + + + F + R+++SW +I Y+Q+G
Sbjct: 240 VESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSL 299
Query: 340 AVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
++Q F ++ E + PN+ TF S+L+ A L+ G++ H+ +++ L+S +V ++L
Sbjct: 300 SLQLFREMLLEGTAPNSVTFVSILSGCEAPS--LLEQGRQIHALVVESSLESHVVVANSL 357
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY-ESVMNQFKEMENKGVRPD 457
L MY + S +S+ +F+ + +W+ II A +R + + ++ M ++GV P
Sbjct: 358 LGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPK 417
Query: 458 SITFLSVLTVCGRNGMIHKGR----HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
++ VL CG + G+ H+ +S L+ + S +V+M + G + EA
Sbjct: 418 TLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGIS------LVNMYAKCGTVGEA 471
Query: 514 EELVGQI 520
++ +I
Sbjct: 472 RKVFDRI 478
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 205/618 (33%), Positives = 328/618 (53%), Gaps = 21/618 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRM-NLIG---VVF 55
MY + G A+ +F + D+V+W V+SG + S + L + + M L G V
Sbjct: 159 MYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRP 218
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ T + L C + G LH +VK G+ V +AL +MYS+ +A +F
Sbjct: 219 NSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALF 278
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
E+P KD VSW +++ Y + G EA+ +MM GL+ D + + S G+ N+
Sbjct: 279 LELPEKDVVSWTSLIGIYCRRGLI-TEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNV 337
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
GK H V K +G V +GN L+S Y K E+ A +VFR +H R+ SW M+
Sbjct: 338 HGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGY 397
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE---GRMIHGLCIKTNFL 287
+ + L++EM+L L+ AIS + + E GR H IK
Sbjct: 398 CKAGCDVKCLELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLD 457
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAFFG 346
+ SV N LI MY R + K+F + ++++WN LIS YA G S AA+ +
Sbjct: 458 EDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQ 517
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ E PN+ T +V++A A ++L+ G++ HS++ ++G D D + +AL+DMY K
Sbjct: 518 MLIEGLTPNSTTLITVISA--CANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKC 575
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++R+F+ + AW +IS HG+ + + F +ME ++P+ +TFL++L
Sbjct: 576 GQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAIL 635
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ +G++ +GR +F M K Y +EP+ HY+CMVD+LG+ G L+EAE++V +P P
Sbjct: 636 SALCHSGLLEEGRKVFTRMGK-YSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPD 694
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ +LL AC++H N EMG RIA +P G Y+L+SN Y W+ + LR+
Sbjct: 695 GGIWGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYILISNSYGGAKKWDEIEKLRET 754
Query: 586 MKSKGVRKEVGFSWADVG 603
MK+ GV+K VG+S D G
Sbjct: 755 MKNLGVQKGVGWSAVDYG 772
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 170/634 (26%), Positives = 298/634 (47%), Gaps = 68/634 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++ Y +G+ A F+ PD WN+++ + D ALS RM G
Sbjct: 52 VSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASDFVAALSAHRRMLASGARPSP 111
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGL----DSEVYVGNALITMYSRWGRLVEARR 113
T A S + G +H+ V++GL V V ++L+ MY+R G + +A +
Sbjct: 112 FTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVAVASSLVYMYARCGNVRDAVK 171
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG----LRLDHVSFTSAASAC 169
VF+EMP +D V+W A++SG ++G+ G E + L+EM+R +R + + S AC
Sbjct: 172 VFEEMPERDVVAWTAVISGCVRNGESG-EGLRYLVEMVRLAGDGSVRPNSRTMESGLEAC 230
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
G L G+ +HG +K+G G V + L S YSKC T DA +F + +++V+SWT
Sbjct: 231 GVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWT 290
Query: 230 TMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
++I + +A+ LF++M G+ P+++ ++ + V G+ H + K
Sbjct: 291 SLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKR 350
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
NF + N LI+MY +FE + + +VF L R+ SWN ++ GY + G + ++ +
Sbjct: 351 NFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELY 410
Query: 345 FGVIKESKPNAYTFG-SVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
+ K + S+++A+ + ++ L+ G+ H + IK LD D V + L+ MY
Sbjct: 411 REMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMY 470
Query: 403 GKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
G+ G + ++F + K + W +IS+ A G + M+ + +M +G+ P+S T
Sbjct: 471 GRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTL 530
Query: 462 LSVLTVCG------RNGMIHK-----------------------------GRHLFDSMLK 486
++V++ C R IH R +FDSML+
Sbjct: 531 ITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQ 590
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP----GLSVLQSLLGACRIHGNV 542
+ ++ M+ G G ++A EL G++ GG G++ L L C G +
Sbjct: 591 HDVVA-----WNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCH-SGLL 644
Query: 543 EMGERIADALMK--MEPAGSGSYVLMSNLYAEKG 574
E G ++ + K +EP Y M +L + G
Sbjct: 645 EEGRKVFTRMGKYSLEP-NLKHYACMVDLLGKSG 677
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 165/354 (46%), Gaps = 26/354 (7%)
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR--- 236
++H +++ G + L+S YS G A F + W ++I +
Sbjct: 31 RVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCAS 90
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL----SEP 290
A+S + M G P+ T A + + G +H C++ L
Sbjct: 91 DFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSV 150
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+V + L+ MYAR +++D+ KVF+E+ R++++W A+ISG +NG S ++ +++
Sbjct: 151 AVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRL 210
Query: 351 S-----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ +PN+ T S L A G ++ L G+ H +++KVG+ P+V SAL MY K
Sbjct: 211 AGDGSVRPNSRTMESGLEACGVLDE--LNSGRCLHGYVVKVGIGDSPMVISALFSMYSKC 268
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
S ++ +F E EK +WT++I R G M F++M G++PD I VL
Sbjct: 269 YSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVL 328
Query: 466 TVCGRNGMIHKG---------RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+ G NG +H G R+ DS+L + + MVD GRV RL
Sbjct: 329 SGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFE-MVDSAGRVFRL 381
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K GQ A IF+++ D+V+WN ++SG+ ++ AL +M + +
Sbjct: 569 IDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNG 628
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT+ LS L H G L G ++ + + K+ L+ + ++ + + G L EA +
Sbjct: 629 VTFLAILS-ALCHSGLLEEGRKVFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVL 687
Query: 117 EMP-NKDSVSWNAILS 131
MP D W +LS
Sbjct: 688 AMPIEPDGGIWGTLLS 703
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 192/637 (30%), Positives = 337/637 (52%), Gaps = 16/637 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLI----GVVFDA 57
+Y K G D+A+ +F+ + +++SWN+++ GF ++ L ++ +L+ G++ D
Sbjct: 254 LYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDV 313
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T T L C G+ +H + VK GL E+ V NALI MYS+ G L EA +F +
Sbjct: 314 ATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRK 373
Query: 118 MPNKDSVSWNAILSGYTQDG-DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ NK VSWN+++ Y+++G + +L + M + + ++ V+ + AC E L
Sbjct: 374 IENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELL 433
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
+ +HG S++ + + N ++ Y+KC A VF M+ ++V SW +I +
Sbjct: 434 SLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHA 493
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ A+ + EM G+ P+D + + L+ A L++ G+ IHG ++
Sbjct: 494 QNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSF 553
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+++Y F+ + + + WNA++SGY+QN L A+ F ++ +
Sbjct: 554 VAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDG 613
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ S+L A + L G+ H +K L D V +L+DMY K G +
Sbjct: 614 LEPDEIAIASILGACSQLSALGL--GKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGH 671
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
SQR+FN K +W +I+ HG + F++M+ +PD TFL VL C
Sbjct: 672 SQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCH 731
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G + M Y +EP +HY+C++DMLGR GRL EA + ++P P +
Sbjct: 732 AGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWS 791
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLL + + ++EMGE+ A+ L+ +E + SY+L+SNLYA G W++V ++R+ MK
Sbjct: 792 SLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLS 851
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
++K+VG SW ++ ++ F +G+N++P S+EI +M
Sbjct: 852 LQKDVGCSWIELR--GKVYSFIAGENSNPSSDEIRKM 886
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/537 (26%), Positives = 284/537 (52%), Gaps = 20/537 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDAL-SFALRMNLIGVVFD 56
+ MY G ++ +F+ L N ++ WN ++SG+ E D+A+ +F +++ D
Sbjct: 150 ITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPD 209
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ + C G +H + VK GL +++VGNA+I +Y + G L EA +FD
Sbjct: 210 NFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFD 269
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKN 174
+MP ++ +SWN+++ G++++G + +EA A ++ GL D + + C E N
Sbjct: 270 KMPEQNLISWNSLIRGFSENG-FWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGN 328
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-S 233
+++G IHG+++K+G + V N L+ YSKC +A +FR++ +++V+SW +MI +
Sbjct: 329 VDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGA 388
Query: 234 MNRE----DAVSLFKEMRLDG--VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+RE + L ++M ++ + N+VT + L+ A + + R +HG ++ +F
Sbjct: 389 YSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQ 448
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + N I YA+ S+ +E VF ++ + + SWNA+I G+AQNG + A+ +F +
Sbjct: 449 YKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEM 508
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ P+ ++ S+L A G L++G+ H +++ GL+ + V +LL +Y
Sbjct: 509 TRLGILPDDFSIVSLLLACGRLG--LLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCS 566
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
F + F +K+ W A++S +++ ++ F++M + G+ PD I S+L
Sbjct: 567 KPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILG 626
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC-MVDMLGRVGRLEEAEELVGQIPG 522
C + + G+ + LK+ +E + +C ++DM + G L ++ + ++ G
Sbjct: 627 ACSQLSALGLGKEVHCFALKNSLME--DNFVACSLMDMYAKSGFLGHSQRIFNRLNG 681
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 215/415 (51%), Gaps = 10/415 (2%)
Query: 82 LIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGV 141
L V + + LITMYS G +E+R VFD + NK+ WNA++SGY ++ Y
Sbjct: 133 LCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYD- 191
Query: 142 EAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EAI +E++ + D+ +F AC + ++ LGK +HG+++KMG + VGN +
Sbjct: 192 EAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAM 251
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSL--FKEMRL-----DGVCP 253
++ Y KC +A ++F +M ++N+ISW ++I E+ L ++ R DG+ P
Sbjct: 252 IALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIP 311
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+ T + L+ S V G +IHG+ +K + E VCN LI MY++ + ++ +F
Sbjct: 312 DVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILF 371
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAA-EDIS 372
++ + ++SWN++I Y++ G + E + ++LN + A E+
Sbjct: 372 RKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESE 431
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L + H + ++ ++ +A + Y K GS+ ++ VF KS +W A+I
Sbjct: 432 LLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGG 491
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
A++GD ++ + EM G+ PD + +S+L CGR G++ G+ + +L++
Sbjct: 492 HAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRN 546
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 131/267 (49%), Gaps = 8/267 (2%)
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
LC+ + F + + LITMY+ +S VFD L + + WNAL+SGY +N L
Sbjct: 133 LCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDE 192
Query: 340 AVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A+ F +I E +P+ +TF ++ A DI L G+ H +K+GL D VG+A
Sbjct: 193 AIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHL--GKSVHGMAVKMGLIMDLFVGNA 250
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM--ENKGVR 455
++ +YGK G + E+ +F++ E++ +W ++I + +G + F+ + G+
Sbjct: 251 MIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLI 310
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
PD T +++L VC G + G + M + + ++DM + G L EA
Sbjct: 311 PDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAI 369
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNV 542
L +I +S S++GA G V
Sbjct: 370 LFRKIENKSVVS-WNSMIGAYSREGFV 395
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
M+MY KSG + IFN LN ++ SWN +++GF + + A+ M D
Sbjct: 660 MDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDR 719
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
T+ L C L EG + Q+ +L + L+ E+ +I M R GRL EA
Sbjct: 720 FTFLGVLQACCHAGLVSEGLNYLAQMQTL---YKLEPELEHYACVIDMLGRAGRLNEALN 776
Query: 114 VFDEMPNK-DSVSW 126
+EMP + D+ W
Sbjct: 777 FINEMPEEPDAKIW 790
>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 970
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 211/652 (32%), Positives = 351/652 (53%), Gaps = 49/652 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMN-LIGVVFDA-- 57
+ KSG A IFN + + V+ N ++ G + ++A + MN +I V ++
Sbjct: 253 FAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 58 VTYSTALSFCLDHE-GFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVF 115
+ S+ + L E G G ++H ++ GL D V +GN L+ MY++ G + +ARRVF
Sbjct: 313 ILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF 372
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M KDSVSWN++++G Q+ + +EA+ M R + + S+ S+C K
Sbjct: 373 CFMTEKDSVSWNSMITGLDQNSCF-IEAVERYQSMRRHEILPGSFTLISSISSCASLKWA 431
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
+LG+QIHG S+K+G +VSV N LM+ Y++ + K+F M + + +SW ++I
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGAL 491
Query: 233 -SMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
S R +AV+ F G N +TF ++ A+S + + G+ IHGL +K N E
Sbjct: 492 ASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADE 551
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQ-AFFGV 347
+ N LI Y + M EK+F +S R+ ++WN++ISGY N L A+ +F +
Sbjct: 552 ATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMM 611
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ +++ + +VL+A + +L+ G H+ ++ L+SD +VGSAL+DMY K G
Sbjct: 612 QTGQRLDSFMYATVLSAFASVA--TLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLSVLT 466
+ + R FN M F M+ G PD +TF+ VL+
Sbjct: 670 LDYALRFFN-------------------------TMPLFANMKLDGQTPPDHVTFVGVLS 704
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G++ +G F+SM Y + P +H+SCM D+LGR G L++ E+ + ++P P +
Sbjct: 705 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNV 764
Query: 527 SVLQSLLGA-CRIHG-NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ +++LGA CR +G E+G++ A+ L ++EP + +YVL+ N+YA G WE + RK
Sbjct: 765 LIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARK 824
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
MK V+KE G+SW + DG+H F +GD +HP ++ IY+ + L +M+
Sbjct: 825 KMKDADVKKEAGYSWVTMK--DGVHMFVAGDKSHPDADVIYKKLKELNRKMR 874
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/495 (29%), Positives = 257/495 (51%), Gaps = 22/495 (4%)
Query: 58 VTYSTALSF---CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+T S LSF C+ H G HS + K GL+ +VY+ N LI Y G V AR+V
Sbjct: 1 MTKSVPLSFVQSCIGHRGA--AKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKV 58
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FDEMP ++ VSW ++SGY+++G++ EA++ L +M+++G+ +H +F SA AC +
Sbjct: 59 FDEMPLRNCVSWACVVSGYSRNGEHK-EALVFLRDMVKEGVFSNHYAFVSALRACQELDS 117
Query: 175 LEL--GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT-GDANKVFRRMHDRNVISWTTM 231
+ + G+QIHG+ K+ Y V NVL+S Y KC + G A + F + +N +SW ++
Sbjct: 118 VGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSI 177
Query: 232 ISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLI-HAISIGNL-VKEGRMIHGLCIKT 284
IS+ ++ A +F M+ DG P + TF L+ A S+ V+ I K+
Sbjct: 178 ISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKS 237
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
FL++ V + L++ +A+ S+ + K+F+++ R ++ N L+ G + A + F
Sbjct: 238 GFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Query: 345 FGV--IKESKPNAYT-FGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-DSDPIVGSALLD 400
+ + + P +Y S AE++ LK G+ H H+I GL D +G+ L++
Sbjct: 298 MDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVN 357
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K GSI +++RVF EK +W ++I+ L ++ + + +++ M + P S T
Sbjct: 358 MYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFT 417
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+S ++ C G+ + LK I+ + + ++ + G L E ++ +
Sbjct: 418 LISSISSCASLKWAKLGQQIHGESLK-LGIDLNVSVSNALMTLYAETGCLNECRKIFSSM 476
Query: 521 PGGPGLSVLQSLLGA 535
P +S S++GA
Sbjct: 477 PEHDQVS-WNSIIGA 490
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 158/540 (29%), Positives = 269/540 (49%), Gaps = 24/540 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N Y ++G A +F+ + + VSW V+SG+ ++ +AL F M GV +
Sbjct: 43 INAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEHKEALVFLRDMVKEGVFSNH 102
Query: 58 VTYSTALSFC--LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW-GRLVEARRV 114
+ +AL C LD G LFG Q+H L+ K + V N LI+MY + G L A R
Sbjct: 103 YAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRA 162
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS-AASACG-HE 172
FD++ K+SVSWN+I+S Y+Q GD A M G R +F S +AC E
Sbjct: 163 FDDVQVKNSVSWNSIISVYSQTGDQRF-AFKMFYSMQCDGSRPTEYTFGSLVTTACSLTE 221
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT-TM 231
++ L +QI K G+ T + VG+ L+S ++K A K+F +M RN ++ M
Sbjct: 222 PDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLM 281
Query: 232 ISMNR----EDAVSLFKEMR-LDGVCPND-VTFIGLIHAISIGNLV--KEGRMIHGLCIK 283
+ + R E+A LF +M + V P V + S+ V K+GR +HG I
Sbjct: 282 VGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVIT 341
Query: 284 TNFLS-EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
T + + N L+ MYA+ S+ D+ +VF ++ ++ +SWN++I+G QN + AV+
Sbjct: 342 TGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVE 401
Query: 343 AFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
+ + + E P ++T S +++ + + L GQ+ H +K+G+D + V +AL+ +
Sbjct: 402 RYQSMRRHEILPGSFTLISSISSCASLKWAKL--GQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALA-RHGDYESVMNQFKEMENKGVRPDSIT 460
Y + G + E +++F+ E + +W +II ALA + F G + + IT
Sbjct: 460 YAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRIT 519
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
F SVL+ G+ + LK Y+I + ++ G+ G ++ E++ ++
Sbjct: 520 FSSVLSAVSSLSFGELGKQIHGLALK-YNIADEATTENALIACYGKCGEMDGCEKIFSRM 578
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 162/325 (49%), Gaps = 9/325 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K G A +F + D VSWN++++G +++ +A+ M ++ +
Sbjct: 356 VNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGS 415
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +++S C + G Q+H +K G+D V V NAL+T+Y+ G L E R++F
Sbjct: 416 FTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSS 475
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D VSWN+I+ EA+ + +R G +L+ ++F+S SA EL
Sbjct: 476 MPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGEL 535
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS--M 234
GKQIHG+++K + N L++ Y KC K+F RM + R+ ++W +MIS +
Sbjct: 536 GKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYI 595
Query: 235 NRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E A+ L M G + + ++ A + ++ G +H ++ S+
Sbjct: 596 HNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVV 655
Query: 292 VCNCLITMYARFESMQDSEKVFDEL 316
V + L+ MY++ + + + F+ +
Sbjct: 656 VGSALVDMYSKCGRLDYALRFFNTM 680
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 196/630 (31%), Positives = 324/630 (51%), Gaps = 85/630 (13%)
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMP--NKDSVSWNAILSGYTQDGDYGVEAILA 146
D +L+ ++ GRL +A FD +P +D+V NA++S + + A+
Sbjct: 91 DPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFAR-ASLAAPAVSV 149
Query: 147 LIEMMRKG-LRLDHVSFTSAASACGHEKNLELG--KQIHGVSIKMGYGTHVSVGNVLMST 203
++ G LR D SFT+ SA G NL Q+H +K G +SV N L++
Sbjct: 150 FHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIAL 209
Query: 204 YSKC---EVTGDANKVFRRMHDRNVISWTTMI-------------SMNRE---------- 237
Y KC E + DA KV M D++ ++WTTM+ S+ E
Sbjct: 210 YMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWN 269
Query: 238 -------------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK- 283
DA LF+ M + V ++ TF ++ A + G+ +HG I+
Sbjct: 270 AMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRL 329
Query: 284 -TNFLSEPS--VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
NF+ E + V N L+T+Y++ + ++++FD ++ ++++SWN ++SGY +G A
Sbjct: 330 QPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKA 389
Query: 341 VQAF------------------------------FGVIK--ESKPNAYTFGSVLNAVGAA 368
V+ F F ++ + KP YT+ + A G
Sbjct: 390 VEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACG-- 447
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
E +LKHG++ H+H+++ G ++ G+ALL MY K G++ +++ VF +W A
Sbjct: 448 ELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNA 507
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+ISAL +HG + F +M +G+ PD I+FL++LT C G++ +G H F+SM +D+
Sbjct: 508 MISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDF 567
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
I P DHY+ ++D+LGR GR+ EA +L+ +P P S+ +++L CR +G++E G
Sbjct: 568 GISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYA 627
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL 608
AD L +M P G+Y+L+SN Y+ G W A +RK M+ +GV+KE G SW +VG +
Sbjct: 628 ADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVG--SKI 685
Query: 609 HGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
H F GD HP ++E+Y+ E +G+ M+ L
Sbjct: 686 HVFLVGDTKHPEAQEVYQFLEVIGARMRKL 715
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 179/378 (47%), Gaps = 48/378 (12%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y + G + A +F ++ V WN ++SG+ +S DA RM V D T+
Sbjct: 244 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 303
Query: 61 STALSFCLDHEGFLFGLQLHSLIVK----FGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ LS C + F+ G +H I++ F ++ + V NAL+T+YS+ G++V A+R+FD
Sbjct: 304 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 363
Query: 117 EMPNKDSVSWNAILSGYTQDG--DYGVEAI---------------------------LAL 147
M KD VSWN ILSGY G D VE L L
Sbjct: 364 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 423
Query: 148 IEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
MR + ++ ++ A +ACG L+ G+Q+H ++ G+ S GN L++ Y+K
Sbjct: 424 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAK 483
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGL 261
C DA VF M + + +SW MIS + +A+ LF +M +G+ P+ ++F+ +
Sbjct: 484 CGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTI 543
Query: 262 IHAISIGNLVKEGRMIHGL-CIKTNFLSEPSVCNC--LITMYARFESMQDSEKVFDELSC 318
+ A + LV EG H +K +F P + LI + R + ++ + +
Sbjct: 544 LTACNHAGLVDEG--FHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPF 601
Query: 319 REIIS-WNALISGYAQNG 335
S W A++SG NG
Sbjct: 602 EPTPSIWEAILSGCRTNG 619
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 195/443 (44%), Gaps = 86/443 (19%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSR-------WGRLVEARRVFDEMPNKDSVS----- 125
QLH ++K G + + V NALI +Y + W +AR+V DEMP+KD ++
Sbjct: 186 QLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASW----DARKVLDEMPDKDDLTWTTMV 241
Query: 126 --------------------------WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH 159
WNA++SGY Q G +A M+ + + LD
Sbjct: 242 VGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSG-MCADAFELFRRMVSEKVPLDE 300
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYG----THVSVGNVLMSTYSKCEVTGDANK 215
+FTS SAC + GK +HG I++ + V N L++ YSK A +
Sbjct: 301 FTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKR 360
Query: 216 VFRRMHDRNVISWTTMIS-------MNR-----------------------------EDA 239
+F M+ ++V+SW T++S +++ EDA
Sbjct: 361 IFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDA 420
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ LF +MR + V P D T+ G I A +K GR +H ++ F + S N L+TM
Sbjct: 421 LKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTM 480
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
YA+ ++ D+ VF + + +SWNA+IS Q+G A++ F ++ E P+ +F
Sbjct: 481 YAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISF 540
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
++L A A + + S G+ + L+D+ G+ G I E++ +
Sbjct: 541 LTILTACNHAGLVD-EGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTM 599
Query: 419 Q-EKSEFAWTAIISALARHGDYE 440
E + W AI+S +GD E
Sbjct: 600 PFEPTPSIWEAILSGCRTNGDME 622
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 103/205 (50%), Gaps = 35/205 (17%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----------------------- 37
+ +Y K G+ A IF+ +N D+VSWNT+LSG+
Sbjct: 346 VTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWM 405
Query: 38 -----------SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKF 86
S+DAL +M V TY+ A++ C + G QLH+ +V+
Sbjct: 406 VMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQC 465
Query: 87 GLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILA 146
G ++ GNAL+TMY++ G + +AR VF MPN DSVSWNA++S Q G +G EA+
Sbjct: 466 GFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHG-HGREALEL 524
Query: 147 LIEMMRKGLRLDHVSFTSAASACGH 171
+M+ +G+ D +SF + +AC H
Sbjct: 525 FDQMVAEGIDPDRISFLTILTACNH 549
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY K G + A +F + N D VSWN ++S + +AL +M G+ D
Sbjct: 478 LTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDR 537
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
+++ T L+ C L EGF + S+ FG+ LI + R GR+ EAR
Sbjct: 538 ISFLTILTACNHAGLVDEGFHY---FESMKRDFGISPGEDHYARLIDLLGRSGRIGEARD 594
Query: 114 VFDEMPNKDSVS-WNAILSGYTQDGD--YGVEAILALIEMMRK 153
+ MP + + S W AILSG +GD +G A L M+ +
Sbjct: 595 LIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 637
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 201/652 (30%), Positives = 347/652 (53%), Gaps = 33/652 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N Y K G D A +F+ + ++V W T++ + ++ +A S M G+ +
Sbjct: 103 INFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSS 162
Query: 58 VTYSTALSFCLDHEGFLFGLQ-------LHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
VT + LFG+ LH + +G S++ + N+++ +Y + G +
Sbjct: 163 VTVLS----------LLFGVSELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEY 212
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
+R++FD M ++D VSWN+++S Y Q G+ E +L L M +G +F S S
Sbjct: 213 SRKLFDYMDHRDLVSWNSLISAYAQIGNI-CEVLLLLKTMRLQGFEAGPQTFGSVLSVAA 271
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
L+LG+ +HG ++ G+ V L+ Y K A ++F R D++V+ WT
Sbjct: 272 SRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTA 331
Query: 231 MISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MIS + + A+++F++M GV P+ T +I A + G I G ++
Sbjct: 332 MISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQE 391
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ + N L+TMYA+ + S VFD ++ R+++SWNA+++GYAQNG A+ F
Sbjct: 392 LPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFN 451
Query: 346 GVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ +++ P++ T S+L G A L G+ HS +I+ GL +V ++L+DMY K
Sbjct: 452 EMRSDNQTPDSITIVSLLQ--GCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCK 509
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + +QR FN+ +W+AII HG E+ + + + G++P+ + FLSV
Sbjct: 510 CGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSV 569
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L+ C NG++ +G ++++SM KD+ I P +H++C+VD+L R GR+EEA + + P
Sbjct: 570 LSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKFPDP 629
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
L VL +L ACR +GN E+G+ IA+ ++ + P +G++V +++ YA WE V
Sbjct: 630 VLDVLGIILDACRANGNNELGDTIANDILMLRPMDAGNFVQLAHCYASINKWEEVGEAWT 689
Query: 585 GMKSKGVRKEVGFSWADV-GDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
M+S G++K G+S+ D+ G I F + N+HP+ +EI + L EM
Sbjct: 690 YMRSLGLKKIPGWSFIDIHGTIT---TFFTDHNSHPQFQEIVCTLKILRKEM 738
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 235/472 (49%), Gaps = 13/472 (2%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
DA T+ + L C F GL LH I+ GL + Y+ ++LI Y+++G AR+VF
Sbjct: 60 DAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVF 119
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D MP ++ V W I+ Y++ G EA EM R+G++ V+ S ++
Sbjct: 120 DYMPERNVVPWTTIIGCYSRTGRVP-EAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHV 178
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
+ +HG +I G+ + +++ N +++ Y KC + K+F M R+++SW ++IS
Sbjct: 179 QC---LHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAY 235
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
N + + L K MRL G TF ++ + +K GR +HG ++ F +
Sbjct: 236 AQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDA 295
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V LI +Y + + + ++F+ S ++++ W A+ISG QNG + A+ F ++K
Sbjct: 296 HVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKF 355
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+ T SV+ A +L G +I++ L D ++L+ MY K G +
Sbjct: 356 GVKPSTATMASVITACAQLGSYNL--GTSILGYILRQELPLDVATQNSLVTMYAKCGHLD 413
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+S VF+ + +W A+++ A++G + F EM + PDSIT +S+L C
Sbjct: 414 QSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCA 473
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
G +H G+ + ++++ + P + +VDM + G L+ A+ Q+P
Sbjct: 474 STGQLHLGKWIHSFVIRN-GLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMP 524
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 207/416 (49%), Gaps = 28/416 (6%)
Query: 112 RRVFDEMPNKDSV-SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
+R +P+ + S NA ++ ++ G + + + M++ + D +F S AC
Sbjct: 14 KRCVVSLPHPATTNSVNATINHHSTQGAHH-QVLATYASMLKTHVPSDAYTFPSLLKACS 72
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
LG +H + G + + L++ Y+K A KVF M +RNV+ WTT
Sbjct: 73 FLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTT 132
Query: 231 MI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I + +A SLF EMR G+ P+ VT + L+ +S + + +HG I
Sbjct: 133 IIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVS---ELAHVQCLHGCAILYG 189
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG--------LS 337
F+S+ ++ N ++ +Y + +++ S K+FD + R+++SWN+LIS YAQ G L
Sbjct: 190 FMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLK 249
Query: 338 LAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
+Q F E+ P TFGSVL+ AA LK G+ H I++ G D V ++
Sbjct: 250 TMRLQGF-----EAGPQ--TFGSVLSV--AASRGELKLGRCLHGQILRAGFYLDAHVETS 300
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L+ +Y K G I + R+F + +K WTA+IS L ++G + + F++M GV+P
Sbjct: 301 LIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPS 360
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ T SV+T C + G + G + +L+ + + +V M + G L+++
Sbjct: 361 TATMASVITACAQLGSYNLGTSILGYILRQ-ELPLDVATQNSLVTMYAKCGHLDQS 415
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 192/637 (30%), Positives = 337/637 (52%), Gaps = 16/637 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLI----GVVFDA 57
+Y K G D+A+ +F+ + +++SWN+++ GF ++ L ++ +L+ G++ D
Sbjct: 254 LYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDV 313
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T T L C G+ +H + VK GL E+ V NALI MYS+ G L EA +F +
Sbjct: 314 ATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRK 373
Query: 118 MPNKDSVSWNAILSGYTQDG-DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ NK VSWN+++ Y+++G + +L + M + + ++ V+ + AC E L
Sbjct: 374 IENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELL 433
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
+ +HG S++ + + N ++ Y+KC A VF M+ ++V SW +I +
Sbjct: 434 SLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHA 493
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ A+ + EM G+ P+D + + L+ A L++ G+ IHG ++
Sbjct: 494 QNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSF 553
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+++Y F+ + + + WNA++SGY+QN L A+ F ++ +
Sbjct: 554 VAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDG 613
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ S+L A + L G+ H +K L D V +L+DMY K G +
Sbjct: 614 LEPDEIAIASILGACSQLSALGL--GKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGH 671
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
SQR+FN K +W +I+ HG + F++M+ +PD TFL VL C
Sbjct: 672 SQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCH 731
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G + M Y +EP +HY+C++DMLGR GRL EA + ++P P +
Sbjct: 732 AGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWS 791
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLL + + ++EMGE+ A+ L+ +E + SY+L+SNLYA G W++V ++R+ MK
Sbjct: 792 SLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLS 851
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
++K+VG SW ++ ++ F +G+N++P S+EI +M
Sbjct: 852 LQKDVGCSWIELR--GKVYSFIAGENSNPSSDEIRKM 886
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/537 (26%), Positives = 284/537 (52%), Gaps = 20/537 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDAL-SFALRMNLIGVVFD 56
+ MY G ++ +F+ L N ++ WN ++SG+ E D+A+ +F +++ D
Sbjct: 150 ITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPD 209
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ + C G +H + VK GL +++VGNA+I +Y + G L EA +FD
Sbjct: 210 NFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFD 269
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKN 174
+MP ++ +SWN+++ G++++G + +EA A ++ GL D + + C E N
Sbjct: 270 KMPEQNLISWNSLIRGFSENG-FWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGN 328
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-S 233
+++G IHG+++K+G + V N L+ YSKC +A +FR++ +++V+SW +MI +
Sbjct: 329 VDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGA 388
Query: 234 MNRE----DAVSLFKEMRLDG--VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+RE + L ++M ++ + N+VT + L+ A + + R +HG ++ +F
Sbjct: 389 YSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQ 448
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + N I YA+ S+ +E VF ++ + + SWNA+I G+AQNG + A+ +F +
Sbjct: 449 YKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEM 508
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ P+ ++ S+L A G L++G+ H +++ GL+ + V +LL +Y
Sbjct: 509 TRLGILPDDFSIVSLLLACGRLG--LLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCS 566
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
F + F +K+ W A++S +++ ++ F++M + G+ PD I S+L
Sbjct: 567 KPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILG 626
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC-MVDMLGRVGRLEEAEELVGQIPG 522
C + + G+ + LK+ +E + +C ++DM + G L ++ + ++ G
Sbjct: 627 ACSQLSALGLGKEVHCFALKNSLME--DNFVACSLMDMYAKSGFLGHSQRIFNRLNG 681
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 215/415 (51%), Gaps = 10/415 (2%)
Query: 82 LIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGV 141
L V + + LITMYS G +E+R VFD + NK+ WNA++SGY ++ Y
Sbjct: 133 LCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYD- 191
Query: 142 EAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EAI +E++ + D+ +F AC + ++ LGK +HG+++KMG + VGN +
Sbjct: 192 EAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAM 251
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSL--FKEMRL-----DGVCP 253
++ Y KC +A ++F +M ++N+ISW ++I E+ L ++ R DG+ P
Sbjct: 252 IALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIP 311
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+ T + L+ S V G +IHG+ +K + E VCN LI MY++ + ++ +F
Sbjct: 312 DVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILF 371
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAA-EDIS 372
++ + ++SWN++I Y++ G + E + ++LN + A E+
Sbjct: 372 RKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESE 431
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L + H + ++ ++ +A + Y K GS+ ++ VF KS +W A+I
Sbjct: 432 LLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGG 491
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
A++GD ++ + EM G+ PD + +S+L CGR G++ G+ + +L++
Sbjct: 492 HAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRN 546
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 131/267 (49%), Gaps = 8/267 (2%)
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
LC+ + F + + LITMY+ +S VFD L + + WNAL+SGY +N L
Sbjct: 133 LCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDE 192
Query: 340 AVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A+ F +I E +P+ +TF ++ A DI L G+ H +K+GL D VG+A
Sbjct: 193 AIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHL--GKSVHGMAVKMGLIMDLFVGNA 250
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM--ENKGVR 455
++ +YGK G + E+ +F++ E++ +W ++I + +G + F+ + G+
Sbjct: 251 MIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLI 310
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
PD T +++L VC G + G + M + + ++DM + G L EA
Sbjct: 311 PDVATMVTLLPVCSGEGNVDVGM-VIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAI 369
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNV 542
L +I +S S++GA G V
Sbjct: 370 LFRKIENKSVVS-WNSMIGAYSREGFV 395
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
M+MY KSG + IFN LN ++ SWN +++GF + + A+ M D
Sbjct: 660 MDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDR 719
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
T+ L C L EG + Q+ +L + L+ E+ +I M R GRL EA
Sbjct: 720 FTFLGVLQACCHAGLVSEGLNYLAQMQTL---YKLEPELEHYACVIDMLGRAGRLNEALN 776
Query: 114 VFDEMPNK-DSVSW 126
+EMP + D+ W
Sbjct: 777 FINEMPEEPDAKIW 790
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 201/666 (30%), Positives = 346/666 (51%), Gaps = 27/666 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+ + GQ A +F+ + PD ++N ++ + A+ M V +
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L C G +H+ GL ++++V ALI +Y R R A VF +
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEKNLE 176
MP +D V+WNA+L+GY G Y AI L++M R GLR + + S L
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYH-HAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALF 218
Query: 177 LGKQIHGVSIKMGYGT---HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
G +H ++ V +G L+ Y+KC+ A +VF M RN ++W+ +I
Sbjct: 219 QGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIG 278
Query: 234 ----MNR-EDAVSLFKEMRLDGVCPNDVTFIG--LIHAISIGNLVKEGRMIHGLCIKTNF 286
+R +A +LFK+M ++G+C T + L S+ +L + G +H L K+
Sbjct: 279 GFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADL-RMGTQLHALLAKSGI 337
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
++ + N L++MYA+ + ++ +FDE++ ++ IS+ AL+SGY QNG A +AF
Sbjct: 338 HADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNG---KAEEAFLV 394
Query: 347 VIK----ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
K +P+ T S++ A + +L+HG+ H +I GL + + ++L+DMY
Sbjct: 395 FKKMQACNVQPDIATMVSLIPA--CSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMY 452
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K G I S++VF++ + +W +I+ HG + F M+N+G PD +TF+
Sbjct: 453 AKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFI 512
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
++ C +G++ +G+H FD+M Y I P +HY CMVD+L R G L+EA + + +P
Sbjct: 513 CLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPL 572
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
+ V +LLGACRIH N+++G++++ + K+ P G+G++VL+SN+++ G ++ A +
Sbjct: 573 KADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV 632
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKR 642
R K KG +K G SW ++ LH F GD +HP S +IY + + ++K L +
Sbjct: 633 RIIQKVKGFKKSPGCSWIEIN--GSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQA 690
Query: 643 ERAIAL 648
+ + L
Sbjct: 691 DTSFVL 696
>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 197/592 (33%), Positives = 321/592 (54%), Gaps = 16/592 (2%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
G F+ T L C D + G Q+H ++K G + V+VG +LI+MYSR G EA
Sbjct: 5 GEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEA 64
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+VF+ + KD N ++ Y + G Y AI I ++ GL + +FT+ S C
Sbjct: 65 EKVFNGVGCKDLRCLNCMILEYGKAG-YEKRAIGVFIYLISVGLDPNDYTFTNIISTC-- 121
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
N+E GKQ+HG+++K G SVGN +++ Y K + +A ++F M+ +N+ISWT +
Sbjct: 122 --NVEEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTAL 179
Query: 232 IS-MNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS R E AV F E+R GV + ++ S + G IHGL IK +
Sbjct: 180 ISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGY 239
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ ++ LI +YA+ ++ Q + VF+ LS R S+NA++ G+ +N + F
Sbjct: 240 PCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLS 299
Query: 347 VIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
++ + KP++ +F +L+ +A SL G+ H++ IK G V +AL+ MY K
Sbjct: 300 QLRLAGIKPDSVSFSRLLSL--SANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAK 357
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + ++ + FN +W AIISA + HG E + ++EME KG PD IT L +
Sbjct: 358 CGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVI 417
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L C +G+ G HLF++M Y I+P +HY+CMVD+LGR G L +A +++ + P
Sbjct: 418 LQACTYSGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIINRSPFSE 477
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ ++L+ C++ G++ +G+ + L+ + P +GSYVL+SN+YA +G + + +R
Sbjct: 478 STLLWRTLVNVCKLCGDLNLGKLASKHLLDLSPDEAGSYVLVSNIYAGEGMIDEASKVRT 537
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
MK + KE G SW ++ ++ +H F + HP S EIY + L +EM+
Sbjct: 538 TMKDLKLSKEAGSSWVEIDNM--VHYFVASGTDHPESIEIYARLDLLRNEMR 587
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 243/457 (53%), Gaps = 33/457 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVL-----SGFEKSDDALSFALRMNLIGVVF 55
++MY +SG FD+A +FN + D+ N ++ +G+EK A+ + + +G+
Sbjct: 52 ISMYSRSGNFDEAEKVFNGVGCKDLRCLNCMILEYGKAGYEKR--AIGVFIYLISVGLDP 109
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T++ +S C E G QLH L VK+G+ + VGNA+ITMY + G + EA R+F
Sbjct: 110 NDYTFTNIISTCNVEE----GKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMF 165
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M K+ +SW A++SGYT++G YG +A+ +E+ G+ D + C KNL
Sbjct: 166 SVMNKKNLISWTALISGYTRNG-YGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNL 224
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
+LG QIHG+ IK+GY +++G L+ Y+KC+ A VF + R+ S+ ++
Sbjct: 225 DLGTQIHGLVIKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGF 284
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIH-AISIGNLVKEGRMIHGLCIKTNFLS 288
N ED + ++RL G+ P+ V+F L+ + + +LVK GR +H IKT F
Sbjct: 285 IENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVK-GRGLHAYSIKTGFAG 343
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
SV N LITMYA+ ++D+ + F+ +S + ISWNA+IS Y+ +G A+ + +
Sbjct: 344 HISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEME 403
Query: 349 KES-KPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMY 402
++ P+ T +L A G +ED L S K G+ P++ + ++D+
Sbjct: 404 EKGFTPDEITILVILQACTYSGLSED-GLHLFNTMES---KYGI--QPLLEHYACMVDLL 457
Query: 403 GKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGD 438
G+ G + ++ + N + +S W +++ GD
Sbjct: 458 GRAGYLSQAMDIINRSPFSESTLLWRTLVNVCKLCGD 494
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 210/664 (31%), Positives = 348/664 (52%), Gaps = 36/664 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFD 56
M Y + G FD A+ +FN++ D VSWN ++ G + L + + G +
Sbjct: 89 MGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPN 148
Query: 57 AVTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
T + C H+G + LH ++K G + V N+L++MY + AR
Sbjct: 149 ISTMVLVIQACRILGTKHDGLI----LHGYLIKSGFWAISSVQNSLLSMYVD-ADMECAR 203
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-----GLRLDHVSFTSAAS 167
+FDEM KD ++W+ ++ GY Q + V ++M RK G+ D V S
Sbjct: 204 ELFDEMHEKDVIAWSVMIGGYLQWEEPQVG-----LQMFRKMVLVPGIEPDGVVMVSVLK 258
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
AC +++ G+ +HG+ I G+ + V N L+ YSKC+ G A KVF + RN +S
Sbjct: 259 ACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVS 318
Query: 228 WTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
W +M+S N +A SL MR + V ++VT + ++ + IH + I
Sbjct: 319 WNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMI 378
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
+ + V + LI YA+ ++ + +VF + R+++SW+ +ISG+A G A+
Sbjct: 379 RRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIA 438
Query: 343 AFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
+ + ++ KPN T ++L A + LK + H I+ G S+ VG+A++DM
Sbjct: 439 VYQEMDRDLVKPNVITIINLLEACSVTAE--LKRSKWAHGVAIRQGFASEVTVGTAVVDM 496
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K G I S+R F++ K+ W+A+I+A +G + F EM+ G++P+ +T
Sbjct: 497 YSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTT 556
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
LSVL C G++ +G LF SM+++ +EP +HYSCMVDMLGR G+L+ A E++ +P
Sbjct: 557 LSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMP 616
Query: 522 GG--PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
G S+ SLL ACR +G E+G+ ++++EP+ S Y++ S++YA G W+
Sbjct: 617 DNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDA 676
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLN 639
A +R K KGV+ G+S + + F +GD +HPRS+EI+ MA+ L +K ++
Sbjct: 677 ARIRVLAKEKGVKVVAGYSLVHID--NKACRFVAGDGSHPRSDEIFSMAQQLHDCIK-ID 733
Query: 640 SKRE 643
K+E
Sbjct: 734 EKKE 737
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 206/412 (50%), Gaps = 14/412 (3%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM-PNKDSVSWNAILSGYT 134
G LH+ ++K G DS +GN+++ Y R G A VF+ M ++DSVSWN ++ G+
Sbjct: 66 GKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHL 125
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
+G V + G + + AC G +HG IK G+
Sbjct: 126 DNGAL-VAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAIS 184
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNRED---AVSLFKEMRL- 248
SV N L+S Y ++ A ++F MH+++VI+W+ MI + E+ + +F++M L
Sbjct: 185 SVQNSLLSMYVDADMEC-ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLV 243
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
G+ P+ V + ++ A + V GR++HGL I F + V N LI MY++ +
Sbjct: 244 PGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGS 303
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVG 366
+ KVF+E+S R +SWN+++SG+ N + + Q+ +++ + + T ++L
Sbjct: 304 AFKVFNEISQRNNVSWNSMLSGFVLNE-NYSEAQSLISSMRKERVETDEVTLVNILQICK 362
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
+ H + H +I+ G +++ +V SAL+D Y K I + VF + + +W
Sbjct: 363 YF--VHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSW 420
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+ +IS A G + + ++EM+ V+P+ IT +++L C + + +
Sbjct: 421 STMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSK 472
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 10/247 (4%)
Query: 237 EDAVSLFKEMRLDGVCPNDVT-FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
++ VS + E++ G+ DV+ F ++ A S + + G+ +H IK F S S+ N
Sbjct: 29 QEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSH-RHGKSLHACLIKQGFDSFTSIGNS 87
Query: 296 LITMYARFESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKP 353
++ Y R + VF+ + R+ +SWN LI G+ NG +A + F + +P
Sbjct: 88 IMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEP 147
Query: 354 NAYTFGSVLNAVGAAEDISLKH-GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
N T V+ A + KH G H ++IK G + V ++LL MY + ++
Sbjct: 148 NISTMVLVIQ---ACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECAR 203
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCGRN 471
+F+E EK AW+ +I + + + + F++M G+ PD + +SVL C +
Sbjct: 204 ELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASS 263
Query: 472 GMIHKGR 478
+ GR
Sbjct: 264 RDVCTGR 270
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 21/167 (12%)
Query: 324 WNALISGY---AQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
W ++S Y + G+ V F ++K A++F +S +HG+ H
Sbjct: 28 WQEVVSHYHEIKKAGIQTVDVSVFPPILK-----AWSF------------LSHRHGKSLH 70
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE-KSEFAWTAIISALARHGDY 439
+ +IK G DS +G++++ Y + G + VFN + + +W +I +G
Sbjct: 71 ACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGAL 130
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ + F G P+ T + V+ C G H G L ++K
Sbjct: 131 VAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIK 177
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 192/610 (31%), Positives = 330/610 (54%), Gaps = 13/610 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MYCK G A +F+ + D VSW T+++G+ K+ + L +M V +
Sbjct: 240 IDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNK 299
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V AL + G ++++ ++ GL S++ V ++ MY++ G L +AR +F
Sbjct: 300 VAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLS 359
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +D V+W+A LS + G Y E + M +GL+ D + S C N+ L
Sbjct: 360 LEGRDLVAWSAFLSALVETG-YPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGL 418
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK +H +IK + +S+ L+S Y + E+ A +F RM ++++ W T+I+
Sbjct: 419 GKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTK 478
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+ +F ++L G+ P+ T +GL A +I + + G +HG K+ F S+ V
Sbjct: 479 YGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHV 538
Query: 293 CNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
L+ MYA+ S+ E++F ++ +SWN +I+GY NG S A+ F + ++
Sbjct: 539 KVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLEN 598
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+PN TF ++L AV L+ H+ II++G S ++G++L+DMY K G +
Sbjct: 599 VRPNLVTFVTILPAVSYLS--ILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRY 656
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S++ F+E + K +W A++SA A HG E + F M+ VR DS++++SVL+ C
Sbjct: 657 SEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRH 716
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G+I +G +F SM + +H+EPS +HY+CMVD+LG G +E L+ ++ P V
Sbjct: 717 SGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWG 776
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL AC+IH NV +GE L+K+EP +V++S++YA+ G W R + + G
Sbjct: 777 ALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHG 836
Query: 591 VRKEVGFSWA 600
++K G+SW
Sbjct: 837 LKKIPGYSWV 846
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 146/556 (26%), Positives = 286/556 (51%), Gaps = 19/556 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M+CK G D A +F+ + D V WN ++SG +S +AL RM + G D
Sbjct: 141 IDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDK 200
Query: 58 VTYSTALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
V+ L+ + G + + +H +V+ + V N+LI MY + G + A+RVFD
Sbjct: 201 VSILN-LAPAVSRLGDVGCCKSIHGYVVRRSICG--VVSNSLIDMYCKCGDVHSAQRVFD 257
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +D VSW +++GY ++G Y E + L +M R ++++ V+ +A ++LE
Sbjct: 258 RMGVRDDVSWATMMAGYVKNGCY-FEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLE 316
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
GK+I+ +++MG + + V ++ Y+KC A ++F + R++++W+ +S
Sbjct: 317 KGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALV 376
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E + +S+F+ M+ +G+ P+ L+ + + + G+++H IK + S+ S
Sbjct: 377 ETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDIS 436
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
+ L++MY RFE + +F+ + ++I+ WN LI+G+ + G A++ F + +
Sbjct: 437 MVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSG 496
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P++ T + +A +D+ L G H I K G +SD V AL+DMY K GS+
Sbjct: 497 ILPDSGTMVGLFSACAIMDDLDL--GTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCS 554
Query: 411 SQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+R+F T+ K E +W +I+ +G ++ F+ M+ + VRP+ +TF+++L
Sbjct: 555 VERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVS 614
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
++ + +++ + + S ++DM + G+L +E+ ++ +S
Sbjct: 615 YLSILREAMAFHTCIIRMGFLSCTLIGNS-LIDMYAKCGQLRYSEKCFHEMENKDTIS-W 672
Query: 530 QSLLGACRIHGNVEMG 545
++L A +HG E+
Sbjct: 673 NAMLSAYAMHGQGELA 688
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/518 (26%), Positives = 246/518 (47%), Gaps = 33/518 (6%)
Query: 17 FNNLNNPDIVSWNTVL---SGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGF 73
F + NP ++ +N+ + S F A++ + IG+ D T++ L C F
Sbjct: 56 FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115
Query: 74 LFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGY 133
G+ ++ IV GL+ +VY+G +LI M+ + G L AR VFD+MP KD V WNA++SG
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGL 175
Query: 134 TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
+Q + EA+ M +G +D VS + A A ++ K IHG ++
Sbjct: 176 SQSLN-PCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICGV 234
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRL 248
VS N L+ Y KC A +VF RM R+ +SW TM++ + + + L +MR
Sbjct: 235 VS--NSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRR 292
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
V N V + + ++ +++G+ I+ ++ +S+ V ++ MYA+ ++
Sbjct: 293 GNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKK 352
Query: 309 SEKVFDELSCREIISWNALIS-----GYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLN 363
+ ++F L R++++W+A +S GY + LS+ V + G+ KP+ +++
Sbjct: 353 ARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGL----KPDKAILSILVS 408
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
+I L G+ H + IK ++SD + + L+ MY + + +FN Q K
Sbjct: 409 GCTEISNIGL--GKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDI 466
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
W +I+ ++GD + F ++ G+ PDS T + + + C + G L
Sbjct: 467 VVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGG 526
Query: 484 MLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ K D H++ + ++DM + G L E L
Sbjct: 527 IEKSGFESDIHVKVA------LMDMYAKCGSLCSVERL 558
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 210/664 (31%), Positives = 348/664 (52%), Gaps = 36/664 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFD 56
M Y + G FD A+ +FN++ D VSWN ++ G + L + + G +
Sbjct: 89 MGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPN 148
Query: 57 AVTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
T + C H+G + LH ++K G + V N+L++MY + AR
Sbjct: 149 ISTMVLVIQACRILGTKHDGLI----LHGYLIKSGFWAISSVQNSLLSMYVD-ADMECAR 203
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-----GLRLDHVSFTSAAS 167
+FDEM KD ++W+ ++ GY Q + V ++M RK G+ D V S
Sbjct: 204 ELFDEMHEKDVIAWSVMIGGYLQWEEPQVG-----LQMFRKMVLVPGIEPDGVVMVSVLK 258
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
AC +++ G+ +HG+ I G+ + V N L+ YSKC+ G A KVF + RN +S
Sbjct: 259 ACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVS 318
Query: 228 WTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
W +M+S N +A SL MR + V ++VT + ++ + IH + I
Sbjct: 319 WNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMI 378
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
+ + V + LI YA+ ++ + +VF + R+++SW+ +ISG+A G A+
Sbjct: 379 RRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIA 438
Query: 343 AFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
+ + ++ KPN T ++L A + LK + H I+ G S+ VG+A++DM
Sbjct: 439 VYQEMDRDLVKPNVITIINLLEACSVTAE--LKRSKWAHGVAIRQGFASEVTVGTAVVDM 496
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K G I S+R F++ K+ W+A+I+A +G + F EM+ G++P+ +T
Sbjct: 497 YSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTT 556
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
LSVL C G++ +G LF SM+++ +EP +HYSCMVDMLGR G+L+ A E++ +P
Sbjct: 557 LSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMP 616
Query: 522 GG--PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
G S+ SLL ACR +G E+G+ ++++EP+ S Y++ S++YA G W+
Sbjct: 617 HNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDA 676
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLN 639
A +R K KGV+ G+S + + F +GD +HPRS+EI+ MA+ L +K ++
Sbjct: 677 ARIRVLAKEKGVKVVAGYSLVHID--NKACRFVAGDGSHPRSDEIFSMAQQLHDCIK-ID 733
Query: 640 SKRE 643
K+E
Sbjct: 734 EKKE 737
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 206/412 (50%), Gaps = 14/412 (3%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM-PNKDSVSWNAILSGYT 134
G LH+ ++K G DS +GN+++ Y R G A VF+ M ++DSVSWN ++ G+
Sbjct: 66 GKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHL 125
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
+G V + G + + AC G +HG IK G+
Sbjct: 126 DNGAL-VAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAIS 184
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNRED---AVSLFKEMRL- 248
SV N L+S Y ++ A ++F MH+++VI+W+ MI + E+ + +F++M L
Sbjct: 185 SVQNSLLSMYVDADMEC-ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLV 243
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
G+ P+ V + ++ A + V GR++HGL I F + V N LI MY++ +
Sbjct: 244 PGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGS 303
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVG 366
+ KVF+E+S R +SWN+++SG+ N + + Q+ +++ + + T ++L
Sbjct: 304 AFKVFNEISQRNNVSWNSMLSGFVLNE-NYSEAQSLISSMRKERVETDEVTLVNILQICK 362
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
+ H + H +I+ G +++ +V SAL+D Y K I + VF + + +W
Sbjct: 363 YF--VHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSW 420
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+ +IS A G + + ++EM+ V+P+ IT +++L C + + +
Sbjct: 421 STMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSK 472
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 10/247 (4%)
Query: 237 EDAVSLFKEMRLDGVCPNDVT-FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
++ VS + E++ G+ DV+ F ++ A S + + G+ +H IK F S S+ N
Sbjct: 29 QEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSH-RHGKSLHACLIKQGFDSFTSIGNS 87
Query: 296 LITMYARFESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKP 353
++ Y R + VF+ + R+ +SWN LI G+ NG +A + F + +P
Sbjct: 88 IMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEP 147
Query: 354 NAYTFGSVLNAVGAAEDISLKH-GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
N T V+ A + KH G H ++IK G + V ++LL MY + ++
Sbjct: 148 NISTMVLVIQ---ACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECAR 203
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCGRN 471
+F+E EK AW+ +I + + + + F++M G+ PD + +SVL C +
Sbjct: 204 ELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASS 263
Query: 472 GMIHKGR 478
+ GR
Sbjct: 264 RDVCTGR 270
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 21/167 (12%)
Query: 324 WNALISGY---AQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
W ++S Y + G+ V F ++K A++F +S +HG+ H
Sbjct: 28 WQEVVSHYHEIKKAGIQTVDVSVFPPILK-----AWSF------------LSHRHGKSLH 70
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE-KSEFAWTAIISALARHGDY 439
+ +IK G DS +G++++ Y + G + VFN + + +W +I +G
Sbjct: 71 ACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGAL 130
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ + F G P+ T + V+ C G H G L ++K
Sbjct: 131 VAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIK 177
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 307/546 (56%), Gaps = 10/546 (1%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y L C++ E G +HS I++ G DS +++ LI Y ++G + AR+VFD MP
Sbjct: 40 YMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMP 99
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ VSW A +SGY ++G Y +A+L +M R G+R + ++ S AC + LE G
Sbjct: 100 ERNVVSWTAQISGYAKNGHYQ-DALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGM 158
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN---- 235
QIHG K + ++ V + L+ +SKC DA +F M +R+V+SW +I
Sbjct: 159 QIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQD 218
Query: 236 -REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+D+ +F M +GV P+ T ++ A S N + + IHG+ I+ F S +
Sbjct: 219 FNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNG 278
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SK 352
LI YA+ E M+ + ++ + +++IS+ A+++GYA+ F ++ +
Sbjct: 279 SLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFME 338
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
+ TF ++LN A+ SL G++ H+ IK D G+AL+DMY K G I ++
Sbjct: 339 IDDVTFCTMLNV--CADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDAT 396
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
R F E +EK+ +WT++I+ +HG + +K+ME +G++P+ ITFLS+L C +G
Sbjct: 397 RAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSG 456
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+ +G F++M+ Y+I P +HYSCM+D+ R G+LEEA ++ ++ P S+ ++
Sbjct: 457 LTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAI 516
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
LGAC I+G++ +GE A L++M+P S +YV+++ +YA G W+ +R M+ + ++
Sbjct: 517 LGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYRSLK 576
Query: 593 KEVGFS 598
K G+S
Sbjct: 577 KIPGYS 582
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 229/447 (51%), Gaps = 17/447 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y K G+ A +F+ + ++VSW +SG+ K+ DAL +M GV + TY
Sbjct: 82 YVKFGETINARKVFDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTY 141
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ L C G+Q+H I K ++V +AL+ ++S+ G + +AR +F+ M
Sbjct: 142 GSVLRACTGLRCLERGMQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSE 201
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D VSWNA++ GY D+ ++ MM +G+ D + S A NL Q
Sbjct: 202 RDVVSWNAVIGGYAAQ-DFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQ 260
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-------S 233
IHG+ I++G+G+H+ + L+ Y+K E A+ +++ M ++VIS+T ++ S
Sbjct: 261 IHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCS 320
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+RE A+ LFK+M+ + +DVTF +++ + + GR IH L IK + +
Sbjct: 321 YSRE-ALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATG 379
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N L+ MYA+ ++D+ + F E+ + +ISW +LI+GY ++G A+ + + E K
Sbjct: 380 NALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLK 439
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSIFES 411
PN TF S+L A + G C +++I K + S ++D++ + G + E+
Sbjct: 440 PNDITFLSLLFACSHSGLTG--EGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEA 497
Query: 412 QRVFNETQEKSEFA-WTAIISALARHG 437
+ + K + W AI+ A + +G
Sbjct: 498 YNMICKMNIKPNSSLWGAILGACSIYG 524
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 188/380 (49%), Gaps = 13/380 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++++ K G + A +F ++ D+VSWN V+ G+ + +DD+ M GV D
Sbjct: 180 VDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEGVTPDC 239
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L + Q+H +I++ G S + + +LI Y++ + A ++
Sbjct: 240 FTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKS 299
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD +S+ AI++GY + Y EA+ +M + +D V+F + + C +L +
Sbjct: 300 MLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSI 359
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+QIH ++IK V+ GN L+ Y+K DA + F M ++NVISWT++I+ +
Sbjct: 360 GRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGK 419
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEPS 291
+A++L+K+M +G+ PND+TF+ L+ A S L EG + + K N L
Sbjct: 420 HGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAE 479
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALI---SGYAQNGLSLAAVQAFFGV 347
+C+I ++AR ++++ + +++ + S W A++ S Y L A +
Sbjct: 480 HYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACSIYGHMSLGEVAATHLLRM 539
Query: 348 IKESKPNAYTFGSVLNAVGA 367
E+ N + A G+
Sbjct: 540 DPENSANYVVLAGIYAASGS 559
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 184/568 (32%), Positives = 335/568 (58%), Gaps = 16/568 (2%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H+ ++K G S ++G+ LI Y + G L EAR++FDE+P++ V+WN+++S + G
Sbjct: 23 VHTNVIKSGF-SYSFLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGK 81
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS-VG 197
EA+ M+ +G+ D +F++ + A + G++ HG+++ +G V
Sbjct: 82 -SKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVA 140
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVC 252
+ L+ Y+K + DA+ VFRR+ +++V+ +T +I + +A+ +F++M GV
Sbjct: 141 SALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVK 200
Query: 253 PNDVTFIG-LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
PN+ T LI+ ++G+LV G++IHGL +K+ S + L+TMY+R ++DS K
Sbjct: 201 PNEYTLACILINCGNLGDLVN-GQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIK 259
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAED 370
VF++L ++W + + G QNG AV F +I+ S PN +T S+L A +
Sbjct: 260 VFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLA- 318
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
L+ G++ H+ +K+GLD + G+AL+++YGK G++ +++ VF+ E A ++I
Sbjct: 319 -MLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMI 377
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
A A++G + F+ ++N G+ P+ +TF+S+L C G++ +G +F S+ +++I
Sbjct: 378 YAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNI 437
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIAD 550
E + DH++CM+D+LGR RLEEA L+ ++ P + + ++LL +C+IHG VEM E++
Sbjct: 438 ELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMS 496
Query: 551 ALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHG 610
++++ P G+++L++NLYA G W V ++ ++ ++K SW DV +H
Sbjct: 497 KILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVD--REVHT 554
Query: 611 FSSGDNTHPRSEEIYRMAECLGSEMKYL 638
F +GD +HPRS EI+ M L ++K L
Sbjct: 555 FMAGDLSHPRSLEIFEMLHGLMKKVKTL 582
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 239/467 (51%), Gaps = 31/467 (6%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLS---GFEKSDDALSFALRMNLIGVVFDAVTY 60
Y K G +A +F+ L + IV+WN+++S KS +A+ F M + GV+ DA T+
Sbjct: 45 YIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTF 104
Query: 61 STALSFCLDHEGFL-FGLQLHSLIVKFGLDS-EVYVGNALITMYSRWGRLVEARRVFDEM 118
S A+S G + G + H L V GL+ + +V +AL+ MY+++ ++ +A VF +
Sbjct: 105 S-AISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRV 163
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
KD V + A++ GY Q G G EA+ +M+ +G++ + + CG+ +L G
Sbjct: 164 LEKDVVLFTALIVGYAQHGLDG-EALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNG 222
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT----MISM 234
+ IHG+ +K G + V+ L++ YS+C + D+ KVF ++ N ++WT+ ++
Sbjct: 223 QLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQN 282
Query: 235 NRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
RE+ AVS+F+EM + PN T ++ A S +++ G IH + +K
Sbjct: 283 GREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAG 342
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGVI 348
LI +Y + +M + VFD L+ ++++ N++I YAQNG A++ F G++
Sbjct: 343 AALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLV 402
Query: 349 KESKPNAYTFGSVL---NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
PN TF S+L N G E+ ++H I++ +D + ++D+ G+
Sbjct: 403 ----PNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDH----FTCMIDLLGRS 454
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDY---ESVMNQFKEM 449
+ E+ + E + W ++++ HG+ E VM++ E+
Sbjct: 455 RRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKVMSKILEL 501
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 174/345 (50%), Gaps = 12/345 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K + A +F + D+V + ++ G+ + +AL M GV +
Sbjct: 144 VDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNE 203
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C + + G +H L+VK GL+S V +L+TMYSR + ++ +VF++
Sbjct: 204 YTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQ 263
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ + V+W + + G Q+G V A+ EM+R + + + +S AC LE+
Sbjct: 264 LDYANQVTWTSFVVGLVQNGREEV-AVSIFREMIRCSISPNPFTLSSILQACSSLAMLEV 322
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+QIH +++K+G + G L++ Y KC A VF + + +V++ +MI +
Sbjct: 323 GEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQ 382
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF+ ++ G+ PN VTFI ++ A + LV+EG I I+ N E ++
Sbjct: 383 NGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFA-SIRNNHNIELTI 441
Query: 293 --CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
C+I + R ++++ + +E+ +++ W L++ +G
Sbjct: 442 DHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHG 486
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 192/596 (32%), Positives = 325/596 (54%), Gaps = 44/596 (7%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS-VSWNAILSGYTQD 136
QLH+ I++ L S + + ++++YS L ++ +F+ +P+ + ++W +I+ YT
Sbjct: 26 QLHAQILRTSLPSPSLL-STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSH 84
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G + + ++ I+M+ G DH F S +C K+L G+ +HG I++G G +
Sbjct: 85 GLF-LHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYT 143
Query: 197 GNVLMSTYSKC----EVT-------------------------GDANKVFRRMHDRNVIS 227
N LM+ YSK EV G KVF M R+++S
Sbjct: 144 CNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVS 203
Query: 228 WTTMISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLC 281
W T+IS N EDA+ + +EM + P+ T ++ + NL+K G+ IHG
Sbjct: 204 WNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLK-GKEIHGYA 262
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
I+ + ++ + + LI MYA+ + DS +VF L + ISWN++I+G QNG+ +
Sbjct: 263 IRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGL 322
Query: 342 QAFFG-VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
+ F +I + KPN +F S++ A A +L G++ H +II+ D + + SAL+D
Sbjct: 323 KFFQQMLIAKIKPNHVSFSSIMPA--CAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVD 380
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K G+I ++ +F++ + +WTA+I A HG ++ FK ME +GV+P+ +
Sbjct: 381 MYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVA 440
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
F++VLT C G++ + F+SM +DY I P +HY+ + D+LGRVGRLEEA E + +
Sbjct: 441 FMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDM 500
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVA 580
P SV +LL ACR+H N+E+ E+++ L ++P G+YVL+SN+Y+ G W+
Sbjct: 501 HIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDAR 560
Query: 581 ILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
LR M+ KG++K+ SW ++ + +H F +GD +HP + I + L +M+
Sbjct: 561 KLRIAMRDKGMKKKPACSWIEIK--NKVHAFVAGDKSHPYYDRINEALKVLLEQME 614
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 233/483 (48%), Gaps = 48/483 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDI-VSWNTVLSGFEKSD---DALSFALRMNLIGVVFD 56
+++Y +L IFN+L +P ++W +++ + +LSF ++M G D
Sbjct: 46 LSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPD 105
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA----- 111
+ + L C + FG +H I++ G+ ++Y NAL+ MYS++ L E
Sbjct: 106 HNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKK 165
Query: 112 ------------------------RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
R+VF+ MP +D VSWN ++SG Q+G + +A++ +
Sbjct: 166 VFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHE-DALMMV 224
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
EM LR D + +S NL GK+IHG +I+ GY V +G+ L+ Y+KC
Sbjct: 225 REMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKC 284
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLI 262
D+ +VF + + ISW ++I+ + + + F++M + + PN V+F ++
Sbjct: 285 TRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIM 344
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
A + + G+ +HG I++ F + + L+ MYA+ +++ + +FD++ +++
Sbjct: 345 PACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMV 404
Query: 323 SWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNA---VGAAEDISLKHGQR 378
SW A+I GYA +G + A+ F + ++ KPN F +VL A G ++
Sbjct: 405 SWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSM 464
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHG 437
+ I GL+ +A+ D+ G+ G + E+ ++ E + W+ +++A H
Sbjct: 465 TQDYRIIPGLEH----YAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHK 520
Query: 438 DYE 440
+ E
Sbjct: 521 NIE 523
>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
Length = 772
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 205/616 (33%), Positives = 323/616 (52%), Gaps = 21/616 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVT 59
MY + G A+ +F + D+V+W V+SG ++ D L + + M + A
Sbjct: 158 MYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARP 217
Query: 60 YSTALSFCLDHEGFL----FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
S + L+ G L G LH VK G+ V +AL +MYS+ +A +F
Sbjct: 218 NSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLF 277
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
E+P KD VSW +++ Y G EA+ EMM GL+ D V + S G+ N+
Sbjct: 278 PELPEKDVVSWTSLIGIYCWRGLI-REAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNV 336
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
GK H V +K +G +V VGN L+S Y K E+ +A +VFR +H R+ SW MI
Sbjct: 337 HGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGY 396
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE---GRMIHGLCIKTNFL 287
+ + L++EM+ L+ AIS + + E GR H IK
Sbjct: 397 CKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLD 456
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAFFG 346
+ SV N LI MY R + K+F + ++++WN LIS YA G S AV +
Sbjct: 457 EDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQ 516
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ E PN+ T +V++A A ++L+ G++ HS++ ++G D D + +AL+DMY K
Sbjct: 517 MLTEGLTPNSTTLITVISA--CANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKC 574
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++R+F+ + AW +IS HG+ + + F +ME ++P+ +TFL++L
Sbjct: 575 GQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAIL 634
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C +G++ +GR LF M K Y +EP+ HY+CMVD+LG+ G L+EAE++V +P P
Sbjct: 635 SACCHSGLLEEGRQLFTRMGK-YSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPD 693
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ +LL AC++H + EMG RIA + G Y+L+SN Y W+ + LR+
Sbjct: 694 GGIWGTLLSACKLHDDFEMGLRIAKKAFASDAENEGYYILISNSYGSAKKWDEIEKLREA 753
Query: 586 MKSKGVRKEVGFSWAD 601
MK+ GV+K G+S D
Sbjct: 754 MKNHGVQKGAGWSAVD 769
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 170/637 (26%), Positives = 300/637 (47%), Gaps = 74/637 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++ Y +G+ A F+ PD WN+++ + D AL+ RM
Sbjct: 51 VSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASDFVAALNAHRRMLASSARPSP 110
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGL----DSEVYVGNALITMYSRWGRLVEARR 113
T A S + G +H+ V++GL V V ++L+ MY+R G + +A +
Sbjct: 111 FTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVK 170
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG----LRLDHVSFTSAASAC 169
+F+EM +D V+W A++SG ++G+ G + + L+EM+R R + + S AC
Sbjct: 171 LFEEMRERDVVAWTAVVSGCVRNGECG-DGLRYLVEMVRLAGDGKARPNSRTMESGLEAC 229
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
G L G+ +HG ++K+G G V + L S YSKC T DA +F + +++V+SWT
Sbjct: 230 GVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWT 289
Query: 230 TMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
++I + +A+ LF+EM G+ P+DV L+ + V G+ H + +K
Sbjct: 290 SLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKR 349
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
NF V N LI+MY +FE + ++ +VF L R+ SWN +I GY + G + ++ +
Sbjct: 350 NFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCKAGCDVKCLELY 409
Query: 345 FGVIKESK-PNAYTF----GSVLNAVGAAED-ISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
+E + + Y F S+++A+ + + L+ G+ H + IK LD D V + L
Sbjct: 410 ----REMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVL 465
Query: 399 LDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
+ MYG+ G + ++F + K + W +IS+ A G + ++ + +M +G+ P+
Sbjct: 466 IGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPN 525
Query: 458 SITFLSVLTVC-----------------------------------GRNGMIHKGRHLFD 482
S T ++V++ C + G + R +FD
Sbjct: 526 STTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFD 585
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG---PGLSVLQSLLGACRIH 539
SML+ + ++ M+ G G ++A EL G++ GG P ++L AC
Sbjct: 586 SMLQHDVVA-----WNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHS 640
Query: 540 GNVEMGERIADALMK--MEPAGSGSYVLMSNLYAEKG 574
G +E G ++ + K +EP Y M +L + G
Sbjct: 641 GLLEEGRQLFTRMGKYSLEP-NLKHYACMVDLLGKSG 676
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 150/321 (46%), Gaps = 16/321 (4%)
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR--- 236
++H +++ G + L+S YS G A F + W ++I +
Sbjct: 30 RVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCAS 89
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS----EP 290
A++ + M P+ T A + + G +H C++ L+
Sbjct: 90 DFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSV 149
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK- 349
+V + L+ MYAR ++D+ K+F+E+ R++++W A++SG +NG ++ +++
Sbjct: 150 AVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRL 209
Query: 350 ----ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++PN+ T S L A G ++ L G+ H + +KVG+ P+V SAL MY K
Sbjct: 210 AGDGKARPNSRTMESGLEACGVLDE--LNSGRCLHGYAVKVGVGDSPMVISALFSMYSKC 267
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
S ++ +F E EK +WT++I G M F+EM G++PD + +L
Sbjct: 268 HSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLL 327
Query: 466 TVCGRNGMIHKGRHLFDSMLK 486
+ G +G +H G+ ++K
Sbjct: 328 SGLGNSGNVHGGKAFHAVIMK 348
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K GQ A IF+++ D+V+WN ++SG+ ++ AL +M + +
Sbjct: 568 IDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNG 627
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT+ LS C H G L G QL + + K+ L+ + ++ + + G L EA +
Sbjct: 628 VTFLAILSACC-HSGLLEEGRQLFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVL 686
Query: 117 EMP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
MP D W +LS D+ EM GLR+ +F S A G+
Sbjct: 687 AMPVEPDGGIWGTLLSACKLHDDF---------EM---GLRIAKKAFASDAENEGY 730
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 321/602 (53%), Gaps = 15/602 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVF-DAVTYSTALSFCLDHE 71
+F+ L+ P + SWN ++ + + DAL+ + M G D TY + C D
Sbjct: 68 LFDKLSQPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLS 127
Query: 72 GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
G+ +H KFG DS+ +V N L+ MY G A+ VFD M + +SWN +++
Sbjct: 128 LIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMIN 187
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
GY ++ + +A+ MM G+ D + S ACG KN+ELG+++H + + G+
Sbjct: 188 GYFRN-NCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFW 246
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM 246
++ V N L+ Y KC +A + + M D++V++WTT+I+ + A+ L M
Sbjct: 247 GNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMM 306
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+ +GV PN V+ L+ A + G+ +H I+ SE V LI MYA+
Sbjct: 307 QCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCG 366
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTFGSVLNAV 365
S KVF S + WNAL+SG+ QN L+ A++ F ++K+ +P+ TF S+L A
Sbjct: 367 NLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAY 426
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN--ETQEKSE 423
D L+ H ++I+ G V S L+D+Y K GS+ + ++FN ++K
Sbjct: 427 AILAD--LQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDI 484
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
W+AII+A +HG + + F +M GV+P+ +TF SVL C G++++G LF+
Sbjct: 485 IIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNF 544
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
MLK + I DHY+CM+D+LGR GRL +A L+ +P P +V +LLGAC IH NVE
Sbjct: 545 MLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVE 604
Query: 544 MGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG 603
+GE A K+EP +G+YVL++ LYA G W +R + G+RK S +V
Sbjct: 605 LGEVAARWTFKLEPENTGNYVLLAKLYAAVGRWGDAERVRDMVNEVGLRKLPAHSLIEVR 664
Query: 604 DI 605
D+
Sbjct: 665 DM 666
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 227/454 (50%), Gaps = 19/454 (4%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
+LH+LI+ G+ S + + L T Y++ A +FD++ SWNA++ Y Q G
Sbjct: 32 RLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQIG 91
Query: 138 DYGVEAILALIEMMRKGLRL-DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
+A+ +EM+ G L D ++ ACG +++G IHG + K GY + V
Sbjct: 92 R-PFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFV 150
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGV 251
N L++ Y A VF M +R VISW TMI + EDAV+++ M GV
Sbjct: 151 QNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGV 210
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ T + ++ A + V+ GR +H L + F V N L+ MY + M+++
Sbjct: 211 EPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWL 270
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAE 369
+ + +++++W LI+GY NG + +A+ G+++ KPN+ + S+L+A G+
Sbjct: 271 LAKGMDDKDVVTWTTLINGYILNGDARSALM-LCGMMQCEGVKPNSVSIASLLSACGSL- 328
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+ L HG+ H+ I+ ++S+ IV +AL++MY K S +VF T +K W A+
Sbjct: 329 -VYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNAL 387
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD-- 487
+S ++ + FK+M K V+PD TF S+L + + ++ +++
Sbjct: 388 LSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGF 447
Query: 488 -YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
Y +E + S +VD+ + G L A ++ I
Sbjct: 448 LYRLEVA----SILVDIYSKCGSLGYAHQIFNII 477
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 233/457 (50%), Gaps = 24/457 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY +G+ + A +F+ + ++SWNT+++G+ + ++DA++ RM +GV D
Sbjct: 155 LAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDC 214
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C + G ++H+L+ + G + V NAL+ MY + G++ EA +
Sbjct: 215 ATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKG 274
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M +KD V+W +++GY +GD + L L MM+ +G++ + VS S SACG L
Sbjct: 275 MDDKDVVTWTTLINGYILNGD--ARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLN 332
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GK +H +I+ + V V L++ Y+KC + KVF + W ++S
Sbjct: 333 HGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFI 392
Query: 234 MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
NR +A+ LFK+M + V P+ TF L+ A +I +++ IH I++ FL
Sbjct: 393 QNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLE 452
Query: 292 VCNCLITMYARFESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + L+ +Y++ S+ + ++F+ +S ++II W+A+I+ Y ++G AV+ F +++
Sbjct: 453 VASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQ 512
Query: 350 ES-KPNAYTFGSVLNAVGAA----EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
KPN TF SVL+A A E SL + II S + ++D+ G+
Sbjct: 513 SGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQII-----SHVDHYTCMIDLLGR 567
Query: 405 RGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
G + ++ + A W A++ A H + E
Sbjct: 568 AGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVE 604
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 161/309 (52%), Gaps = 9/309 (2%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
K++H + + +G + ++ + L +TY++C A+ +F ++ + SW M+ M +
Sbjct: 31 KRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQI 90
Query: 238 ----DAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
DA++LF EM G P+ T+ +I A +L+ G IHG K + S+ V
Sbjct: 91 GRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFV 150
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ MY + ++ VFD + R +ISWN +I+GY +N + AV + ++
Sbjct: 151 QNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGV 210
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ T SVL A G +++ L G+ H+ + + G + +V +AL+DMY K G + E+
Sbjct: 211 EPDCATVVSVLPACGLLKNVEL--GREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEA 268
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ +K WT +I+ +GD S + M+ +GV+P+S++ S+L+ CG
Sbjct: 269 WLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSL 328
Query: 472 GMIHKGRHL 480
++ G+ L
Sbjct: 329 VYLNHGKCL 337
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 194/407 (47%), Gaps = 21/407 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFAL---RMNLIGVVFDA 57
++MY K GQ +A + +++ D+V+W T+++G+ + DA S + M GV ++
Sbjct: 256 VDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNS 315
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V+ ++ LS C G LH+ ++ ++SEV V ALI MY++ + +VF
Sbjct: 316 VSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMG 375
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
K + WNA+LSG+ Q+ EAI +M+ K ++ DH +F S A +L+
Sbjct: 376 TSKKRTAPWNALLSGFIQN-RLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQ 434
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR--RMHDRNVISWTTMISM- 234
IH I+ G+ + V ++L+ YSKC G A+++F + D+++I W+ +I+
Sbjct: 435 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAY 494
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN-FLSE 289
+ + AV LF +M GV PN VTF ++HA S LV EG + +K + +S
Sbjct: 495 GKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISH 554
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG---YAQNGLSLAAVQAFF 345
C+I + R + D+ + + + W AL+ + L A + F
Sbjct: 555 VDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTF 614
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
+ E+ N + AVG D +R + +VGL P
Sbjct: 615 KLEPENTGNYVLLAKLYAAVGRWGD-----AERVRDMVNEVGLRKLP 656
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 7/244 (2%)
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
E + +H L + S ++C+ L T YA+ + +FD+LS + SWNA++ Y
Sbjct: 29 ETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYV 88
Query: 333 QNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKH-GQRCHSHIIKVGLD 389
Q G A+ F ++ + P+ +T+ V+ A G D+SL G H K G D
Sbjct: 89 QIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACG---DLSLIDVGVGIHGQTFKFGYD 145
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
SD V + LL MY G +Q VF+ QE++ +W +I+ R+ E +N + M
Sbjct: 146 SDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRM 205
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
+ GV PD T +SVL CG + GR + +++++ + + +VDM + G+
Sbjct: 206 MDVGVEPDCATVVSVLPACGLLKNVELGREV-HTLVQEKGFWGNIVVRNALVDMYVKCGQ 264
Query: 510 LEEA 513
++EA
Sbjct: 265 MKEA 268
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 198/647 (30%), Positives = 335/647 (51%), Gaps = 35/647 (5%)
Query: 7 SGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD-----DALSFALRMNLIGVVFDAVTYS 61
SG +A +F+ + +PD+ ++N ++ + S D L RM V + T+
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
AL C G +H + GL ++++V AL+ MY + L +A +F MP +
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 122 DSVSWNAILSGYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
D V+WNA+L+GY G Y V +L++ +M LR + + + + L G
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSM-QMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 180 QIHGVSIKMGYGTH----------VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
+H I+ ++ V +G L+ Y+KC A +VF M RN ++W+
Sbjct: 249 SVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308
Query: 230 TMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIG-LIHAISIGNLVKEGRMIHGLCIK 283
+I A LFK M G+C T I + A + + ++ G +H L K
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ ++ + N L++MYA+ + + +FDE++ ++ +S++AL+SGY QNG A +A
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG---RAEEA 425
Query: 344 FFGVIK----ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F K +P+A T S++ A + +L+HG+ H +I GL S+ + +AL+
Sbjct: 426 FLVFKKMQACNVEPDAATMVSLIPAC--SHLAALQHGRCSHGSVIIRGLASETSICNALI 483
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K G I S++VFN + +W +I+ HG + F EM N G PD +
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 543
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
TF+ +L+ C +G++ +G+H F M Y + P +HY CMVD+L R G L+EA E +
Sbjct: 544 TFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 603
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P + V +LLGACR++ N+++G++++ + ++ P G+G++VL+SN+Y+ G ++
Sbjct: 604 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 663
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
A +R K +G +K G SW ++ LH F GD +HP+S EIYR
Sbjct: 664 AEVRIIQKVQGFKKSPGCSWIEIN--GSLHAFVGGDQSHPQSPEIYR 708
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 190/386 (49%), Gaps = 23/386 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE-----KSDDALSFALRMNLIGVVF 55
++MY K A IF + D+V+WN +L+G+ A +++M + +
Sbjct: 167 LDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRP 226
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSE----------VYVGNALITMYSRW 105
+A T L G +H+ ++ L S V +G AL+ MY++
Sbjct: 227 NASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKC 286
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTS 164
G L+ ARRVFD MP ++ V+W+A++ G+ +A L M+ +GL L S S
Sbjct: 287 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRM-TQAFLLFKAMLAQGLCFLSPTSIAS 345
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
A AC +L +G+Q+H + K G ++ GN L+S Y+K + A +F M ++
Sbjct: 346 ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKD 405
Query: 225 VISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
+S++ ++S E+A +FK+M+ V P+ T + LI A S ++ GR HG
Sbjct: 406 TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 465
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
I SE S+CN LI MYA+ + S +VF+ + R+I+SWN +I+GY +GL
Sbjct: 466 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKE 525
Query: 340 AVQAFFGVIKES-KPNAYTFGSVLNA 364
A F + P+ TF +L+A
Sbjct: 526 ATALFLEMNNLGFPPDGVTFICLLSA 551
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 5/194 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K+G D+A+ +F+ + D VS++ ++SG+ ++++A +M V DA
Sbjct: 382 LSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDA 441
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + + C G H ++ GL SE + NALI MY++ GR+ +R+VF+
Sbjct: 442 ATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNM 501
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP++D VSWN +++GY G G EA +EM G D V+F SAC H +
Sbjct: 502 MPSRDIVSWNTMIAGYGIHG-LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIE 560
Query: 178 GKQIHGVSIKMGYG 191
GK V ++ GYG
Sbjct: 561 GKHWFHV-MRHGYG 573
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G+ D + +FN + + DIVSWNT+++G+ +A + L MN +G D
Sbjct: 483 IDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDG 542
Query: 58 VTYSTALSFCLDHEGFLFGLQ--LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT+ LS C H G + + H + +GL + ++ + SR G L EA
Sbjct: 543 VTFICLLSAC-SHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 601
Query: 116 DEMPNKDSVS-WNAIL 130
MP + V W A+L
Sbjct: 602 QSMPLRADVRVWVALL 617
>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 210/656 (32%), Positives = 329/656 (50%), Gaps = 29/656 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF------EKSDDALSFALRMNLIGVVFDA 57
Y K G D A F D V W ++ GF EK + +R +G+ +
Sbjct: 162 YAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVF-VEMRGLGLGLELNE 220
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGL--DSEVYVGNALITMYSRWGRLVEARRVF 115
+ ++ L D G Q+ L VK GL +++ NAL+ MYSR G +A ++F
Sbjct: 221 FSLTSVLGALSDVRE---GEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMF 277
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
DEM D VSW + G D +EA ++ + ++ + SA K L
Sbjct: 278 DEMTEPDVVSWTERI-GAAYDA---IEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLL 333
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+ G+QI G+ K GY SV N L+ Y KC A +F M + +SW ++I+
Sbjct: 334 KSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGY 393
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E+ A+ +F +MR + PN T ++ + N ++ IH +K F+ +
Sbjct: 394 AENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDD 453
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-FGVIK 349
S+ +CLIT Y + + +S++V+ ++S ++ NA+ + G A++ F G
Sbjct: 454 SMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRL 513
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ + T VL A GA D L++G+ HS +K G+ D V SA++D+Y K G++
Sbjct: 514 HQEVDCITLSIVLKACGALTD--LEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVD 571
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E+ + F + + AW A++ A+HG Y V F +M G++PD IT+L VL C
Sbjct: 572 EAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCC 631
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++++ SML+ + + P +HY+CM+D+ GRVG LE+A+ + Q+P P +
Sbjct: 632 HAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIW 691
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
Q LL C IHGNV++GE A L++++P +YVL+SNLYA G W V LR+ MK K
Sbjct: 692 QILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKK 751
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM---KYLNSKR 642
+ KE G SW V +H F + D +HP S+EIY + L EM YL R
Sbjct: 752 IICKEPGSSWIQVR--GSVHYFFASDTSHPESKEIYMKLQRLYEEMFASPYLEQDR 805
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 162/529 (30%), Positives = 262/529 (49%), Gaps = 29/529 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
+N + SG F +A + PD VSWN+++SG F + + G+ D
Sbjct: 62 VNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDE 121
Query: 58 VTYSTALSFCLDHEGFLFGLQL-HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ S+ + C G L ++ H + +K GL + +V + L+ Y++ G + A + F
Sbjct: 122 FSLSSLVKGC----GVLEQNEVAHGVCLKMGLLNG-FVVSGLLDGYAKLGDVDSAEKCFK 176
Query: 117 EMPNKDSVSWNAILSGYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
E DSV W A++ G+ +G++ G E +EM GL L+ F S S G +
Sbjct: 177 EFYIADSVVWTAMVCGFVWNGEFEKGRE---VFVEMRGLGLGLELNEF-SLTSVLGALSD 232
Query: 175 LELGKQIHGVSIKMGY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ G+Q+ G+S+KMG G + + N LM+ YS+C DA K+F M + +V+SWT I
Sbjct: 233 VREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERI 292
Query: 233 SMNREDAVSLFKEMRL---DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
DA+ F+ RL + N+ I ++ A+ L+K GR I GLC K +L
Sbjct: 293 GAAY-DAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLV 351
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N LI MY + M + +FDE+ C + +SWN+LI+GYA+NGL A++ F +
Sbjct: 352 ASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRD 411
Query: 350 E-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+PN YT S+L AA + + HS+I+K+G D + S L+ YGK I
Sbjct: 412 YLLQPNKYTLASILEV--AANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMI 469
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
ES+RV+++ + + A+ + L G + + F+ D IT VL C
Sbjct: 470 CESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKAC 529
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEE 515
G + GR++ LK S D++ S ++D+ + G ++EA +
Sbjct: 530 GALTDLEYGRNIHSMALKS---GMSQDNFVESAVIDVYCKCGTVDEAAK 575
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 217/458 (47%), Gaps = 34/458 (7%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q ++L +K G + ++ + ++ ++ G ARR + P D+VSWN+++SGY +
Sbjct: 41 QSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFR 100
Query: 138 DYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G + L +R+ GL D S +S CG LE + HGV +KMG V
Sbjct: 101 QPG--PVFDLFNGLRRSGLSPDEFSLSSLVKGCG---VLEQNEVAHGVCLKMGLLNGFVV 155
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGV 251
L+ Y+K A K F+ + + + WT M+ + E +F EMR G+
Sbjct: 156 SG-LLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGL 214
Query: 252 C--PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV--CNCLITMYARFESMQ 307
N+ + ++ A+S V+EG + GL +K L S+ N L+ MY+R S
Sbjct: 215 GLELNEFSLTSVLGALSD---VREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKS 271
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVIKES--KPNAYTFGSVLN 363
D+ K+FDE++ +++SW I G + A++AF F ++ + N Y +VL+
Sbjct: 272 DAIKMFDEMTEPDVVSWTERI------GAAYDAIEAFELFRLVLSGNMEVNEYMLINVLS 325
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
A+ E LK G++ K G V +AL+ MYGK G + ++ +F+E
Sbjct: 326 AM--REPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDS 383
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
+W ++I+ A +G + + F +M + ++P+ T S+L V + + +
Sbjct: 384 VSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSY 443
Query: 484 MLK-DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
++K + ++ S SC++ G+ + E++ + I
Sbjct: 444 IVKLGFIVDDS--MLSCLITAYGKCNMICESKRVYSDI 479
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 217/456 (47%), Gaps = 27/456 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIG-VVFDAVT 59
MNMY + G A+ +F+ + PD+VSW + + +A R+ L G + +
Sbjct: 261 MNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYDAIEAFEL-FRLVLSGNMEVNEYM 319
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
LS + + G Q+ L K G V NALI MY + G +V AR +FDEM
Sbjct: 320 LINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEML 379
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
DSVSWN++++GY ++G +A+ +M L+ + + S + E
Sbjct: 380 CGDSVSWNSLIAGYAENGLMK-QALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAM 438
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM----- 234
QIH +K+G+ S+ + L++ Y KC + ++ +V+ + NV+ M +
Sbjct: 439 QIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAG 498
Query: 235 NREDAVSLFK---EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
DA+ LF+ + + C +T ++ A ++ GR IH + +K+ +
Sbjct: 499 CHADALKLFQTGWRLHQEVDC---ITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNF 555
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + +I +Y + ++ ++ K F +S +++WNA++ GYAQ+G + F +++
Sbjct: 556 VESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELG 615
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG-----SALLDMYGKR 405
+P+ T+ VLN+ A ++ H+++ + L+ +V + ++D++G+
Sbjct: 616 IQPDEITYLGVLNSCCHAGLVN-----EAHTYLSSM-LELHGVVPCLEHYACMIDLFGRV 669
Query: 406 GSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
G + +++R ++ + W ++S HG+ +
Sbjct: 670 GLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVD 705
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++YCK G D+A F N++ ++V+WN ++ G+ + + +M +G+ D
Sbjct: 561 IDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDE 620
Query: 58 VTYSTALSFCLDHEGFLFGLQ--LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+TY L+ C H G + L S++ G+ + +I ++ R G L +A+R
Sbjct: 621 ITYLGVLNSCC-HAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTI 679
Query: 116 DEMP-NKDSVSWNAILSGYTQDG--DYGVEAILALIEM 150
D+MP D+ W +LSG G D G A LIE+
Sbjct: 680 DQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIEL 717
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/624 (31%), Positives = 322/624 (51%), Gaps = 85/624 (13%)
Query: 95 GNALITMYSRWGRLVEARRVFDEMP--NKDSVSWNAILSGYTQDGDYGVEAILALIEMMR 152
+L+ + GRL +A FD +P +D+V NA++S + + A+ ++
Sbjct: 95 ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFAR-ASLAAPAVSVFHALLG 153
Query: 153 KG-LRLDHVSFTSAASACGHEKNLELG--KQIHGVSIKMGYGTHVSVGNVLMSTYSKC-- 207
G LR D SFT+ SA G NL Q+H +K G +SV N L++ Y KC
Sbjct: 154 SGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDT 213
Query: 208 -EVTGDANKVFRRMHDRNVISWTTMI-------------SMNRE---------------- 237
E + DA KV M D++ ++WTTM+ S+ E
Sbjct: 214 PEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGY 273
Query: 238 -------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK--TNFLS 288
DA LF+ M + V ++ TF ++ A + G+ +HG I+ NF+
Sbjct: 274 VQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVP 333
Query: 289 EPS--VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-- 344
E + V N L+T+Y++ + ++++FD ++ ++++SWN ++SGY +G AV+ F
Sbjct: 334 EAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKV 393
Query: 345 ----------------------------FGVIK--ESKPNAYTFGSVLNAVGAAEDISLK 374
F ++ + KP YT+ + A G E +LK
Sbjct: 394 MPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACG--ELGALK 451
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
HG++ H+H+++ G ++ G+ALL MY K G++ +++ VF +W A+ISAL
Sbjct: 452 HGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALG 511
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
+HG + F +M +G+ PD I+FL++LT C G++ +G H F+SM +D+ I P
Sbjct: 512 QHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGE 571
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
DHY+ ++D+LGR GR+ EA +L+ +P P S+ +++L CR +G++E G AD L +
Sbjct: 572 DHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFR 631
Query: 555 MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSG 614
M P G+Y+L+SN Y+ G W A +RK M+ +GV+KE G SW +VG +H F G
Sbjct: 632 MIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVG--SKIHVFLVG 689
Query: 615 DNTHPRSEEIYRMAECLGSEMKYL 638
D HP ++E+Y+ E +G+ M+ L
Sbjct: 690 DTKHPEAQEVYQFLEVIGARMRKL 713
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 179/378 (47%), Gaps = 48/378 (12%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y + G + A +F ++ V WN ++SG+ +S DA RM V D T+
Sbjct: 242 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 301
Query: 61 STALSFCLDHEGFLFGLQLHSLIVK----FGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ LS C + F+ G +H I++ F ++ + V NAL+T+YS+ G++V A+R+FD
Sbjct: 302 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 361
Query: 117 EMPNKDSVSWNAILSGYTQDG--DYGVEAI---------------------------LAL 147
M KD VSWN ILSGY G D VE L L
Sbjct: 362 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 421
Query: 148 IEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
MR + ++ ++ A +ACG L+ G+Q+H ++ G+ S GN L++ Y+K
Sbjct: 422 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAK 481
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGL 261
C DA VF M + + +SW MIS + +A+ LF +M +G+ P+ ++F+ +
Sbjct: 482 CGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTI 541
Query: 262 IHAISIGNLVKEGRMIHGL-CIKTNFLSEPSVCNC--LITMYARFESMQDSEKVFDELSC 318
+ A + LV EG H +K +F P + LI + R + ++ + +
Sbjct: 542 LTACNHAGLVDEG--FHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPF 599
Query: 319 REIIS-WNALISGYAQNG 335
S W A++SG NG
Sbjct: 600 EPTPSIWEAILSGCRTNG 617
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 195/443 (44%), Gaps = 86/443 (19%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSR-------WGRLVEARRVFDEMPNKDSVSW---- 126
QLH ++K G + + V NALI +Y + W +AR+V DEMP+KD ++W
Sbjct: 184 QLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASW----DARKVLDEMPDKDDLTWTTMV 239
Query: 127 ---------------------------NAILSGYTQDGDYGVEAILALIEMMRKGLRLDH 159
NA++SGY Q G +A M+ + + LD
Sbjct: 240 VGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSG-MCADAFELFRRMVSEKVPLDE 298
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYG----THVSVGNVLMSTYSKCEVTGDANK 215
+FTS SAC + GK +HG I++ + V N L++ YSK A +
Sbjct: 299 FTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKR 358
Query: 216 VFRRMHDRNVISWTTMIS-------MNR-----------------------------EDA 239
+F M+ ++V+SW T++S +++ EDA
Sbjct: 359 IFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDA 418
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ LF +MR + V P D T+ G I A +K GR +H ++ F + S N L+TM
Sbjct: 419 LKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTM 478
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
YA+ ++ D+ VF + + +SWNA+IS Q+G A++ F ++ E P+ +F
Sbjct: 479 YAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISF 538
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
++L A A + + S G+ + L+D+ G+ G I E++ +
Sbjct: 539 LTILTACNHAGLVD-EGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTM 597
Query: 419 Q-EKSEFAWTAIISALARHGDYE 440
E + W AI+S +GD E
Sbjct: 598 PFEPTPSIWEAILSGCRTNGDME 620
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 103/205 (50%), Gaps = 35/205 (17%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----------------------- 37
+ +Y K G+ A IF+ +N D+VSWNT+LSG+
Sbjct: 344 VTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWM 403
Query: 38 -----------SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKF 86
S+DAL +M V TY+ A++ C + G QLH+ +V+
Sbjct: 404 VMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQC 463
Query: 87 GLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILA 146
G ++ GNAL+TMY++ G + +AR VF MPN DSVSWNA++S Q G +G EA+
Sbjct: 464 GFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHG-HGREALEL 522
Query: 147 LIEMMRKGLRLDHVSFTSAASACGH 171
+M+ +G+ D +SF + +AC H
Sbjct: 523 FDQMVAEGIDPDRISFLTILTACNH 547
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 105/235 (44%), Gaps = 38/235 (16%)
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGV 347
PS L+ A ++D+ FD + R+ + NA++S +A+ L+ AV F +
Sbjct: 92 PSPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHAL 151
Query: 348 IKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK- 404
+ +P+ Y+F ++++AVG +++ H + H ++K G + V +AL+ +Y K
Sbjct: 152 LGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKC 211
Query: 405 --RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK---------- 452
+ +++++V +E +K + WT ++ R GD + + F+E++ K
Sbjct: 212 DTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMIS 271
Query: 453 ---------------------GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
V D TF SVL+ C G G+ + +++
Sbjct: 272 GYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIR 326
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY K G + A +F + N D VSWN ++S + +AL +M G+ D
Sbjct: 476 LTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDR 535
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
+++ T L+ C L EGF + S+ FG+ LI + R GR+ EAR
Sbjct: 536 ISFLTILTACNHAGLVDEGFHY---FESMKRDFGISPGEDHYARLIDLLGRSGRIGEARD 592
Query: 114 VFDEMPNKDSVS-WNAILSGYTQDGD--YGVEAILALIEMMRK 153
+ MP + + S W AILSG +GD +G A L M+ +
Sbjct: 593 LIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 635
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/604 (30%), Positives = 322/604 (53%), Gaps = 29/604 (4%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ + Y L CLD + +H ++K G +V + L+ +Y++ G + +ARRVF
Sbjct: 63 EKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVF 122
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ MP ++ V+W ++ G+ Q+ AI EM+ G + ++ AC ++L
Sbjct: 123 ENMPRRNVVAWTTLMVGFVQNSQ-PKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSL 181
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+LG Q H IK SVG+ L S YSKC DA K F R+ ++NVISWT+ +S
Sbjct: 182 KLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSAC 241
Query: 236 REDA-----VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++ + LF EM + + PN+ T + ++ G + LCIK + S
Sbjct: 242 GDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNL 301
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ----NGLSLAAVQ---- 342
V N L+ +Y + + ++ + F+ + +++WNA+I+G+AQ +L+A Q
Sbjct: 302 RVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSE 361
Query: 343 --AFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
F + +S KP+ +T SVL+ + ++++ G++ H+ IK G SD IV ++L
Sbjct: 362 ALKIFSKLNQSGMKPDLFTLSSVLSV--CSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSL 419
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+ MY K GSI + + F E ++ AWT++I+ ++HG + ++ F++M GVRP++
Sbjct: 420 ISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNT 479
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
+TF+ VL+ C GM+ + + F+ M K Y I+P DHY CMVDM R+GRLE+A +
Sbjct: 480 VTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIK 539
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEM 578
++ P + + + CR HGN+E+G ++ L+ ++P +YVL+ N+Y ++
Sbjct: 540 KMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDD 599
Query: 579 VAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRS-------EEIYRMAECL 631
V+ +RK M+ + V K +SW + D ++ F + D THP S E++ A+ L
Sbjct: 600 VSRVRKMMEVEKVGKLKDWSWISIK--DKVYSFKTNDKTHPPSSLICKSLEDLLAKAKNL 657
Query: 632 GSEM 635
G EM
Sbjct: 658 GYEM 661
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 235/463 (50%), Gaps = 27/463 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+N+Y K G + A +F N+ ++V+W T++ GF + A+ M G
Sbjct: 106 VNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSI 165
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S L C + G Q H+ I+K+ LD + VG+AL ++YS+ GRL +A + F
Sbjct: 166 YTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSR 225
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ K+ +SW + +S +G V+ + +EM+ + ++ + + TSA S C +LEL
Sbjct: 226 IREKNVISWTSAVSACGDNGA-PVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLEL 284
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G Q+ + IK GY +++ V N L+ Y K +A++ F RM D ++++W MI+ + +
Sbjct: 285 GTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQ 344
Query: 238 ----------------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+A+ +F ++ G+ P+ T ++ S +++G IH
Sbjct: 345 MMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQT 404
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IKT FLS+ V LI+MY + S++ + K F E+S R +I+W ++I+G++Q+G+S A+
Sbjct: 405 IKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQAL 464
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SAL 398
F + + +PN TF VL+A A +S + I++ P++ +
Sbjct: 465 HIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALN---YFEIMQKKYKIKPVMDHYECM 521
Query: 399 LDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+DM+ + G + ++ + E SEF W+ I+ HG+ E
Sbjct: 522 VDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLE 564
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/566 (33%), Positives = 310/566 (54%), Gaps = 14/566 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+++ ++ GL ++ L+ S G + AR++FD+ P+ D WNAI+ Y++ G
Sbjct: 93 QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+G AI M + D SF AC LE+G+++HG + G+ + V V
Sbjct: 153 FFG-HAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQ 211
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVC 252
N L++ Y+KC AN VF R+ DR ++SWT++IS + +A+ +F EMR V
Sbjct: 212 NGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVR 271
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ + + ++ A + ++ G+ IHG IK E + L ++YA+ + +
Sbjct: 272 PDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLF 331
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAF-FGVIKESKPNAYTFGSVLNAVGAAEDI 371
F+++ +I WNA+ISGY +NG + A++ F K +P++ T S + A A+
Sbjct: 332 FNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAA--CAQIG 389
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SL+ + +I +D IV ++L+D Y K GS+ ++ VF+ +K W+A++
Sbjct: 390 SLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMV 449
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
HG + F M GV P+ +TF+ +LT C +G++ +G LF M +DY IE
Sbjct: 450 GYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIE 508
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
P HY+C+VD+LGR G L+ A V +P PG+SV +LL AC+IH +V +GE A+
Sbjct: 509 PRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAER 568
Query: 552 LMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG-LHG 610
L ++P +G YV +SNLYA W+ VA +R M+ KG+ K +G+S V +I+G L
Sbjct: 569 LFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYS---VIEINGKLQA 625
Query: 611 FSSGDNTHPRSEEIYRMAECLGSEMK 636
F +GD THPRS+EI+ E L +K
Sbjct: 626 FQAGDKTHPRSKEIFEEVEDLERRLK 651
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 205/443 (46%), Gaps = 21/443 (4%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTAL 64
G+ A +F+ +PD+ WN ++ + + A+ RM + V D ++ L
Sbjct: 121 GEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVL 180
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
C G ++H I + G +S+V+V N L+ +Y++ G +V A VF + ++ V
Sbjct: 181 KACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIV 240
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
SW +I+SGY Q+G +EA+ EM + +R D ++ S A ++LE GK IHG
Sbjct: 241 SWTSIISGYAQNGQ-PIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGC 299
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDA 239
IKMG + L S Y+KC A F ++ + ++I W MIS E+A
Sbjct: 300 VIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEA 359
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ LF+ M+ + P+ +T I A + ++ R + + F ++ V LI
Sbjct: 360 IELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDT 419
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
YA+ S+ + VFD + ++++ W+A++ GY +G ++ F + + PN TF
Sbjct: 420 YAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTF 479
Query: 359 GSVLNAVGAA----EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR- 413
+L A + E L H R G++ + ++D+ G+ G + +
Sbjct: 480 VGLLTACKNSGLVEEGWDLFHRMR------DYGIEPRHQHYACVVDLLGRAGHLDRAYNF 533
Query: 414 VFNETQEKSEFAWTAIISALARH 436
V N E W A++SA H
Sbjct: 534 VMNMPIEPGVSVWGALLSACKIH 556
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 76/169 (44%), Gaps = 7/169 (4%)
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+ + + S+++ + I H + ++ ++ GL + + L++ G + +
Sbjct: 73 KPDKF-YASLID-----DSIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCA 126
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+++F++ + F W AI+ +RHG + + + M+ V PD +F VL C
Sbjct: 127 RKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSAL 186
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ GR + + + + E + +V + + G + A + G++
Sbjct: 187 PALEMGRRVHGQIFR-HGFESDVFVQNGLVALYAKCGEIVRANAVFGRL 234
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/647 (30%), Positives = 334/647 (51%), Gaps = 35/647 (5%)
Query: 7 SGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD-----DALSFALRMNLIGVVFDAVTYS 61
SG +A +F+ + +PD+ ++N ++ + S D L RM V + T+
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
AL C G +H + GL ++++V AL+ MY + L +A +F MP +
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 122 DSVSWNAILSGYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
D V+WNA+L+GY G Y V +L++ +M LR + + + + L G
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSM-QMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 180 QIHGVSIKMGYGTH----------VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
+H I+ + V +G L+ Y+KC A +VF M RN ++W+
Sbjct: 249 SVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308
Query: 230 TMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIG-LIHAISIGNLVKEGRMIHGLCIK 283
+I A LFK M G+C T I + A + + ++ G +H L K
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ ++ + N L++MYA+ + + +FDE++ ++ +S++AL+SGY QNG A +A
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG---RAEEA 425
Query: 344 FFGVIK----ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F K +P+A T S++ A + +L+HG+ H +I GL S+ + +AL+
Sbjct: 426 FLVFKKMQACNVEPDAATMVSLIPAC--SHLAALQHGRCSHGSVIIRGLASETSICNALI 483
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K G I S++VFN + +W +I+ HG + F EM N G PD +
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 543
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
TF+ +L+ C +G++ +G+H F M Y + P +HY CMVD+L R G L+EA E +
Sbjct: 544 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 603
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P + V +LLGACR++ N+++G++++ + ++ P G+G++VL+SN+Y+ G ++
Sbjct: 604 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 663
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
A +R K +G +K G SW ++ LH F GD +HP+S EIYR
Sbjct: 664 AEVRIIQKVQGFKKSPGCSWIEIN--GSLHAFVGGDQSHPQSPEIYR 708
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 189/386 (48%), Gaps = 23/386 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE-----KSDDALSFALRMNLIGVVF 55
++MY K A IF + D+V+WN +L+G+ A +++M + +
Sbjct: 167 LDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRP 226
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSE----------VYVGNALITMYSRW 105
+A T L G +H+ ++ L V +G AL+ MY++
Sbjct: 227 NASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKC 286
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTS 164
G L+ ARRVFD MP ++ V+W+A++ G+ +A L M+ +GL L S S
Sbjct: 287 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRM-TQAFLLFKAMLAQGLCFLSPTSIAS 345
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
A AC +L +G+Q+H + K G ++ GN L+S Y+K + A +F M ++
Sbjct: 346 ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKD 405
Query: 225 VISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
+S++ ++S E+A +FK+M+ V P+ T + LI A S ++ GR HG
Sbjct: 406 TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 465
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
I SE S+CN LI MYA+ + S +VF+ + R+I+SWN +I+GY +GL
Sbjct: 466 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKE 525
Query: 340 AVQAFFGVIKES-KPNAYTFGSVLNA 364
A F + P+ TF +L+A
Sbjct: 526 ATALFLEMNNLGFPPDGVTFICLLSA 551
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K+G D+A+ +F+ + D VS++ ++SG+ ++++A +M V DA
Sbjct: 382 LSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDA 441
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + + C G H ++ GL SE + NALI MY++ GR+ +R+VF+
Sbjct: 442 ATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNM 501
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP++D VSWN +++GY G G EA +EM G D V+F SAC H +
Sbjct: 502 MPSRDIVSWNTMIAGYGIHG-LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIE 560
Query: 178 GKQIHGVSIKMGYG 191
GK V MG+G
Sbjct: 561 GKHWFHV---MGHG 571
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G+ D + +FN + + DIVSWNT+++G+ +A + L MN +G D
Sbjct: 483 IDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDG 542
Query: 58 VTYSTALSFCLDHEGFLFGLQ--LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT+ LS C H G + + H + +GL + ++ + SR G L EA
Sbjct: 543 VTFICLLSAC-SHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 601
Query: 116 DEMPNKDSVS-WNAIL 130
MP + V W A+L
Sbjct: 602 QSMPLRADVRVWVALL 617
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/589 (32%), Positives = 319/589 (54%), Gaps = 46/589 (7%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITM--YSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
Q+H+ +++ GL + + + LIT S + L A++VFD++P+ + +WN ++ Y
Sbjct: 53 QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYAS 112
Query: 136 DGDYGVEAILALIEMMRKGLRL-DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
+ +++L + M+ + D +F A + L GK HG+ IK+ G+ V
Sbjct: 113 SSNPH-QSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDV 171
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLD 249
+ N L+ Y+KC G +VF + R+V+SW +MI+ E+A+ LF+EM
Sbjct: 172 FILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQ 231
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
V PN +T +G++ A + + + GR +H + ++ N ++ MY + S++D+
Sbjct: 232 NVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDA 291
Query: 310 EKVFDELSCREIISW-------------------------------NALISGYAQNGLSL 338
+++FD++ ++I+SW NALIS Y Q G
Sbjct: 292 KRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPK 351
Query: 339 AAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
A++ F + K +KP+ T S L+A + L G H +I K G+ + + +
Sbjct: 352 EALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDL--GGWIHVYIKKQGMKLNCHLTT 409
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
+L+DMY K G + ++ VF+ + K F W+A+I+ LA HG + + F +M+ V+P
Sbjct: 410 SLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKP 469
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+++TF ++L C G++ +GR F+ M Y + P HY+CMVD+LGR G LEEA EL
Sbjct: 470 NAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVEL 529
Query: 517 VGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDW 576
+ ++P P SV +LLGAC IH NV + E+ L+++EP G+YVL+SN+YA+ G W
Sbjct: 530 IEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKW 589
Query: 577 EMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+ V+ LRK M+ G++KE G S +V I +H F GDN+HP +++IY
Sbjct: 590 DRVSGLRKLMRDVGLKKEPGCSSIEVDGI--VHEFLVGDNSHPSAKKIY 636
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 225/491 (45%), Gaps = 56/491 (11%)
Query: 10 FDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVF-DAVTYSTALS 65
D A +F+ + +P++ +WNT++ + S + +L LRM F D T+ +
Sbjct: 85 LDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIK 144
Query: 66 FCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVS 125
+ E G H +++K L S+V++ N+LI Y++ G L RVF +P +D VS
Sbjct: 145 AASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVS 204
Query: 126 WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVS 185
WN++++ + Q G EA+ EM + ++ + ++ SAC + + E G+ +H
Sbjct: 205 WNSMITAFVQ-GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYI 263
Query: 186 IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI------------- 232
+ G +++ N ++ Y+KC DA ++F +M +++++SWTTM+
Sbjct: 264 ERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQ 323
Query: 233 ----SMNRED-------------------AVSLFKEMRLDGVC-PNDVTFIGLIHAISIG 268
+M +D A+ LF E++L P++VT + + A +
Sbjct: 324 GIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQL 383
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ G IH K + LI MY + +Q + VF + +++ W+A+I
Sbjct: 384 GAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMI 443
Query: 329 SGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHI 383
+G A +G A+ A F ++E KPNA TF ++L A VG E+ Q +
Sbjct: 444 AGLAMHGHGKDAI-ALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYG 502
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGDY--- 439
+ G+ + ++D+ G+ G + E+ + + + W A++ A H +
Sbjct: 503 VLPGVKH----YACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLA 558
Query: 440 ESVMNQFKEME 450
E +Q E+E
Sbjct: 559 EQACSQLIELE 569
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 39/314 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y K G+ +F N+ D+VSWN++++ F + ++AL M V +
Sbjct: 178 IHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNG 237
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T LS C F FG +HS I + + + + NA++ MY++ G + +A+R+FD+
Sbjct: 238 ITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDK 297
Query: 118 MPNKDSVSWNAILSGYTQDGDY-------------GVEAILALIE--------------- 149
MP KD VSW +L GY + G+Y + A ALI
Sbjct: 298 MPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELF 357
Query: 150 ---MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
+ K + D V+ S SAC ++LG IH K G + + L+ Y K
Sbjct: 358 HELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCK 417
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGL 261
C A VF + ++V W+ MI+ + +DA++LF +M+ D V PN VTF +
Sbjct: 418 CGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNI 477
Query: 262 IHAISIGNLVKEGR 275
+ A S LV+EGR
Sbjct: 478 LCACSHVGLVEEGR 491
>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
Length = 899
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/645 (30%), Positives = 349/645 (54%), Gaps = 33/645 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVF-D 56
+N+Y K G+ +A +F L ++VSWN +++ ++ DA+ M+L G V +
Sbjct: 168 VNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPN 227
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ + + C + G H I++ G DS ++VGN+L+ MY + G + AR VF+
Sbjct: 228 DATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFE 287
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+M +++ VSW ++ Y Q G + A L + M + V+F + +C ++L
Sbjct: 288 KMSSRNVVSWTVMIWAYAQQG--FIRAAFDLYKRM--DCEPNAVTFMAVMDSCLRPEDLP 343
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR--NVISWTTMISM 234
+QIH + G+ + + L++ Y KC A +F + +R N ++W MIS
Sbjct: 344 RAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISG 403
Query: 235 -----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ A+ F +M L+GV PN VT++ + A S N + GR +H + N + E
Sbjct: 404 LAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLEN-IHE 462
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
++ N +I MY + S+ ++ F ++ R+++SWN +I+ YAQ+G A++ F +
Sbjct: 463 ANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDL 522
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG--LDSDPIVGSALLDMYGKRG 406
E + T+ ++A G+ ++L G+ HS + L+ DP V +AL+ MY + G
Sbjct: 523 EGWTTDRATYLGAIDACGSVPSLAL--GKTIHSIVATAAPCLEQDPGVATALVTMYARCG 580
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
S+ +++ VF + ++ W+ +I+A A+HG ++ F+EM+ +G +PD++TF +++
Sbjct: 581 SLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVA 640
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C R G++ G F SM++DY I S DH+ MVD+LGR G LEEAE+++ + P
Sbjct: 641 ACSRRGVVKDGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEEAEQVMRKNPCALAH 700
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSY----VLMSNLYAEKGDWEMVAIL 582
+V LLGAC +HG+VE G RIA + ++++ S S+ +++ LY G WE A +
Sbjct: 701 AV---LLGACHVHGDVERGIRIAQSALELDWKNSASFAASMAMLAELYGAAGRWEDAARV 757
Query: 583 RKGMKSKGVRKEV-GFSWADVGDIDGLHGFSSGDN--THPRSEEI 624
RK ++S+ R+E G SW +V + +H F D+ PR ++I
Sbjct: 758 RKAVESRNARREPGGRSWIEVK--NRVHEFGEDDDRLQGPRLDKI 800
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 260/474 (54%), Gaps = 24/474 (5%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y++ L C + + G +H I+ G Y+ N LI MY++ G L +A VF+ +P
Sbjct: 29 YASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLP 88
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELG 178
N + SW A+++ Y ++G + +L L M+ G + D F++ +AC L G
Sbjct: 89 NPNVFSWTALITAYAKEGH--LREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEG 146
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
K IH ++ G T V VGN +++ Y KC +A VF R+ +RN++SW +I+ N +
Sbjct: 147 KAIHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQN 205
Query: 238 ----DAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
DA+ +F M LDG V PND TF+ ++ A S + G+ H I+T F S V
Sbjct: 206 GHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFV 265
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK--E 350
N L+ MY + S+ + VF+++S R ++SW +I YAQ G ++A F + K +
Sbjct: 266 GNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGF----IRAAFDLYKRMD 321
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+PNA TF +V+++ ED L ++ H+H++ G DSD ++ L+ MYGK GS+
Sbjct: 322 CEPNAVTFMAVMDSCLRPED--LPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDS 379
Query: 411 SQRVFNETQEKSEFA--WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ +F +E+S A W A+IS LA+HG+ + + F +ME +GVRP+S+T+L+ L C
Sbjct: 380 AWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEAC 439
Query: 469 GRNGMIHKGRHLFDS-MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +GR L +L++ H + + +++M G+ G L+EA + ++P
Sbjct: 440 SSLNDLTRGRQLHARILLENIH---EANLSNAVINMYGKCGSLDEAMDEFAKMP 490
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/551 (29%), Positives = 281/551 (50%), Gaps = 22/551 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
MY K G + AL +F L NP++ SW +++ + K + L +M L G DA
Sbjct: 70 MYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFV 129
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ST L+ C G +H V G++++V VGNA++ +Y + GR+ EA+ VF+ +P
Sbjct: 130 FSTVLTACSSAGALNEGKAIHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLP 188
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELG 178
++ VSWNA+++ Q+G + +A+ M G +R + +F S AC + +L G
Sbjct: 189 ERNLVSWNALIAANAQNG-HCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRG 247
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED 238
K H I+ G+ +++ VGN L++ Y KC A VF +M RNV+SWT MI +
Sbjct: 248 KSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQ 307
Query: 239 -----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
A L+K M + PN VTF+ ++ + + IH + + F S+ +
Sbjct: 308 GFIRAAFDLYKRMDCE---PNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQ 364
Query: 294 NCLITMYARFESMQDSEKVFDELSCRE--IISWNALISGYAQNGLSLAAVQAFFGVIKES 351
CL+TMY + S+ + +F+ L R ++WNA+ISG AQ+G S A++ F+ + E
Sbjct: 365 VCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEG 424
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+PN+ T+ + L A + D L G++ H+ I+ + + + +A+++MYGK GS+ E
Sbjct: 425 VRPNSVTYLASLEACSSLND--LTRGRQLHARILLENIH-EANLSNAVINMYGKCGSLDE 481
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ F + E+ +W +I+ A+HG + FK+M+ +G D T+L + CG
Sbjct: 482 AMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGS 541
Query: 471 NGMIHKGRHLFDSMLKDYH-IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+ G+ + + +E P + +V M R G L +A+ + + L
Sbjct: 542 VPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWR-SHSRNLVTW 600
Query: 530 QSLLGACRIHG 540
+L+ AC HG
Sbjct: 601 SNLIAACAQHG 611
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 187/372 (50%), Gaps = 14/372 (3%)
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
++ + L + S C +K+ GK +H + G G + + N L+ Y+KC
Sbjct: 16 QLKKSSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCG 75
Query: 209 VTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIH 263
DA +VF + + NV SWT +I+ + + + LF++M+LDG P+ F ++
Sbjct: 76 CLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLT 135
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
A S + EG+ IH C + V N ++ +Y + + +++ VF+ L R ++S
Sbjct: 136 ACSSAGALNEGKAIHD-CAVLAGMETQVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVS 194
Query: 324 WNALISGYAQNGLSLAAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
WNALI+ AQNG A+Q F + +PN TF SV++A D L G+ H
Sbjct: 195 WNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLD--LPRGKSTHE 252
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
II+ G DS VG++L++MYGK GS+ ++ VF + ++ +WT +I A A+ G +
Sbjct: 253 RIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRA 312
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+ +K M+ P+++TF++V+ C R + + + M+ + C+V
Sbjct: 313 AFDLYKRMD---CEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVAS-GFDSDAVLQVCLV 368
Query: 502 DMLGRVGRLEEA 513
M G+ G ++ A
Sbjct: 369 TMYGKCGSVDSA 380
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 318/641 (49%), Gaps = 86/641 (13%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ TYS+ L C + G ++HS+I + + +G L+++Y+ G L E RRV
Sbjct: 97 LETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRV 156
Query: 115 FDEMPNK---------------------------------------------------DS 123
FD M K D
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDV 216
Query: 124 VSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
+SWN+++SGY +G + G+E +MM G+ +D + S C + L LGK +
Sbjct: 217 ISWNSMISGYVSNGLTERGLEI---YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAV 273
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED--- 238
H ++IK + ++ N L+ YSKC A +VF +M +RNV+SWT+MI+ D
Sbjct: 274 HSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRS 333
Query: 239 --AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
A+ L ++M +GV + V ++HA + + G+ +H N S VCN L
Sbjct: 334 DGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNAL 393
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAY 356
+ MY + SM + VF + ++IISWN +I E KP++
Sbjct: 394 MDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG--------------------ELKPDSR 433
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
T +L A + +L+ G+ H +I++ G SD V +AL+D+Y K G + ++ +F+
Sbjct: 434 TMACILPACASLS--ALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFD 491
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
K +WT +IS HG + F EM + G+ PD ++F+S+L C +G++ +
Sbjct: 492 MIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQ 551
Query: 477 GRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGAC 536
G F M D++IEP +HY+CMVD+L R G L +A E + +P P ++ +LL C
Sbjct: 552 GWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGC 611
Query: 537 RIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVG 596
RI+ ++E+ E++A+ + ++EP +G YVL++N+YAE WE V +R+ + KG+RK G
Sbjct: 612 RIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPG 671
Query: 597 FSWADVGDIDGLHGFSSGDN-THPRSEEIYRMAECLGSEMK 636
SW ++ L F SG+N +HP S++I + + + +MK
Sbjct: 672 CSWIEIKGKVNL--FVSGNNSSHPHSKKIESLLKKMRRKMK 710
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 231/466 (49%), Gaps = 51/466 (10%)
Query: 4 YCKSGQFDKALCIF--------------------NNLNNPDIVSWNTVLSGFEK---SDD 40
Y K G F +++C+F + L + D++SWN+++SG+ ++
Sbjct: 175 YAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTER 234
Query: 41 ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALIT 100
L +M +G+ D T + L C + G +HSL +K + + N L+
Sbjct: 235 GLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLD 294
Query: 101 MYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
MYS+ G L A RVF++M ++ VSW ++++GYT+DG AI L +M ++G++LD V
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSD-GAIRLLQQMEKEGVKLDVV 353
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+ TS AC +L+ GK +H +++ V N LM Y+KC AN VF M
Sbjct: 354 ATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTM 413
Query: 221 HDRNVISWTTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+++ISW TMI E++ P+ T ++ A + + ++ G+ IHG
Sbjct: 414 VVKDIISWNTMIG-----------ELK-----PDSRTMACILPACASLSALERGKEIHGY 457
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
++ + S+ V N L+ +Y + + + +FD + ++++SW +ISGY +G A
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEA 517
Query: 341 VQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--S 396
+ A F ++++ +P+ +F S+L A + L+ G R +I+K + +P + +
Sbjct: 518 I-ATFNEMRDAGIEPDEVSFISILYA--CSHSGLLEQGWR-FFYIMKNDFNIEPKLEHYA 573
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFA--WTAIISALARHGDYE 440
++D+ + G++ ++ F ET + A W A++ + D E
Sbjct: 574 CMVDLLSRTGNLSKAYE-FIETLPIAPDATIWGALLCGCRIYHDIE 618
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 198/418 (47%), Gaps = 44/418 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K G D AL +F + ++VSW ++++G+ +SD A+ +M GV D
Sbjct: 293 LDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDV 352
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V ++ L C G +H I ++S ++V NAL+ MY++ G + A VF
Sbjct: 353 VATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFST 412
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD +SWN ++ L+ D + AC LE
Sbjct: 413 MVVKDIISWNTMIG----------------------ELKPDSRTMACILPACASLSALER 450
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
GK+IHG ++ GY + V N L+ Y KC V G A +F + ++++SWT MIS M
Sbjct: 451 GKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGM 510
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +A++ F EMR G+ P++V+FI +++A S L+++G + +K +F EP +
Sbjct: 511 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKL 569
Query: 293 CN--CLITMYARFESMQDSEKVFDELS-CREIISWNALISG---YAQNGLSLAAVQAFFG 346
+ C++ + +R ++ + + + L + W AL+ G Y L+ + F
Sbjct: 570 EHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFE 629
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ E+ T VL A AE + +R I K GL +P G + +++ GK
Sbjct: 630 LEPEN-----TGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNP--GCSWIEIKGK 680
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 195/461 (42%), Gaps = 88/461 (19%)
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ +NA + + Q G+ +E + L+ M +K L+ +++S C K+L GK
Sbjct: 63 DRQVTDYNAKILHFCQLGN--LENAMELVCMCQKS-ELETKTYSSVLQLCAGSKSLTDGK 119
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM----- 234
++H + +G L+S Y+ C + +VF M +NV W M+S
Sbjct: 120 KVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 235 NREDAVSLFKEM---------------RLDGVCPNDV----------------------- 256
+ ++++ LFK M D +C DV
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIY 239
Query: 257 -------------TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
T I ++ + + G+ +H L IK+ F + N L+ MY++
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKC 299
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVL 362
+ + +VF+++ R ++SW ++I+GY ++G S A++ + KE K + S+L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSIL 359
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
+A A SL +G+ H +I ++S+ V +AL+DMY K GS+ + VF+ K
Sbjct: 360 HA--CARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKD 417
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
+W +I L +PDS T +L C + +G+ +
Sbjct: 418 IISWNTMIGEL---------------------KPDSRTMACILPACASLSALERGKEIHG 456
Query: 483 SMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
+L++ + S D + + +VD+ + G L A L IP
Sbjct: 457 YILRNGY---SSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/638 (30%), Positives = 314/638 (49%), Gaps = 80/638 (12%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ TYS+ L C + F G ++HS+I + + +G L++ Y+ G L E RRV
Sbjct: 97 LETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRV 156
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-------------------------- 148
FD M K+ WN ++S Y + GD+ L I
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDV 216
Query: 149 ------------------------EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
+MM G+ +D + S C + L LGK +H +
Sbjct: 217 ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----A 239
+IK + ++ N L+ YSKC A +VF +M +RNV+SWT+MI+ D A
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGA 336
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ L ++M +GV + V ++HA + + G+ +H N S VCN L+ M
Sbjct: 337 IKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDM 396
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFG 359
YA+ SM+ + VF + ++IISWN +I E KP++ T
Sbjct: 397 YAKCGSMEAANSVFSTMVVKDIISWNTMIG--------------------ELKPDSRTMA 436
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
VL A + +L+ G+ H +I++ G SD V +AL+D+Y K G + ++ +F+
Sbjct: 437 CVLPACASLS--ALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
K +WT +I+ HG + F EM + G+ PD ++F+S+L C +G++ +G
Sbjct: 495 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIH 539
F M D++IEP +HY+CMVD+L R G L +A E + +P P ++ +LL CR +
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNY 614
Query: 540 GNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSW 599
++E+ E++A+ + ++EP SG YVL++N+YAE WE V LR+ + +G+RK G SW
Sbjct: 615 HDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSW 674
Query: 600 ADVGDIDGLHGFSSGDN-THPRSEEIYRMAECLGSEMK 636
++ L F SG+N +HP S+ I + + + +MK
Sbjct: 675 IEIKGKVNL--FVSGNNSSHPHSKNIESLLKKMRRKMK 710
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 225/439 (51%), Gaps = 31/439 (7%)
Query: 11 DKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTYSTALSFC 67
+ A +F+ L + D++SWN+++SG+ ++ L +M +G+ D T + L C
Sbjct: 202 ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261
Query: 68 LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN 127
+ G +HSL +K + + N L+ MYS+ G L A RVF++M ++ VSW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 128 AILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
++++GYT+DG AI L +M ++G++LD V+ TS AC +L+ GK +H
Sbjct: 322 SMIAGYTRDGRSD-GAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEMR 247
+++ V N LM Y+KC AN VF M +++ISW TMI E++
Sbjct: 381 NNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG-----------ELK 429
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
P+ T ++ A + + ++ G+ IHG ++ + S+ V N L+ +Y + +
Sbjct: 430 -----PDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLG 484
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAV 365
+ +FD + ++++SW +I+GY +G A+ A F ++++ +P+ +F S+L A
Sbjct: 485 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAI-ATFNEMRDAGIEPDEVSFISILYA- 542
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIFESQRVFNETQEKSE 423
+ L+ G R +I+K + +P + + ++D+ + G++ ++ F ET +
Sbjct: 543 -CSHSGLLEQGWR-FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE-FIETLPIAP 599
Query: 424 FA--WTAIISALARHGDYE 440
A W A++ + D E
Sbjct: 600 DATIWGALLCGCRNYHDIE 618
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 198/415 (47%), Gaps = 38/415 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K G D AL +F + ++VSW ++++G+ +SD A+ +M GV D
Sbjct: 293 LDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDV 352
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V ++ L C G +H I ++S ++V NAL+ MY++ G + A VF
Sbjct: 353 VAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFST 412
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD +SWN ++ L+ D + AC LE
Sbjct: 413 MVVKDIISWNTMIG----------------------ELKPDSRTMACVLPACASLSALER 450
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
GK+IHG ++ GY + V N L+ Y KC V G A +F + ++++SWT MI+ M
Sbjct: 451 GKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGM 510
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +A++ F EMR G+ P++V+FI +++A S L+++G + +K +F EP +
Sbjct: 511 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKL 569
Query: 293 CN--CLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ C++ + +R ++ + + + L + W AL+ G +N + + +
Sbjct: 570 EHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG-CRNYHDIELAEKVAERVF 628
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
E +P + VL A AE + +R I K GL +P G + +++ GK
Sbjct: 629 ELEPENSGY-YVLLANIYAEAEKWEEVKRLREKIGKQGLRKNP--GCSWIEIKGK 680
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 195/455 (42%), Gaps = 88/455 (19%)
Query: 126 WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVS 185
+NA + + Q GD +E + LI M +K L+ +++S C K+ GK++H +
Sbjct: 69 YNAKILHFCQLGD--LENAMELICMCKKS-ELETKTYSSVLQLCAGLKSFTDGKKVHSII 125
Query: 186 IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAV 240
G ++G L+S Y+ C + +VF M +NV W M+S + ++++
Sbjct: 126 KSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI 185
Query: 241 SLFKEM---------------RLDGVCPNDV----------------------------- 256
LFK M D +C DV
Sbjct: 186 CLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYL 245
Query: 257 -------TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
T I ++ + + G+ +H L IK++F + N L+ MY++ + +
Sbjct: 246 GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGA 305
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
+VF+++ R ++SW ++I+GY ++G S A++ + KE K + S+L+A A
Sbjct: 306 LRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHA--CA 363
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
SL +G+ H +I ++S+ V +AL+DMY K GS+ + VF+ K +W
Sbjct: 364 RSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNT 423
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+I L +PDS T VL C + +G+ + +L++
Sbjct: 424 MIGEL---------------------KPDSRTMACVLPACASLSALERGKEIHGYILRNG 462
Query: 489 HIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
+ S D + + +VD+ + G L A L IP
Sbjct: 463 Y---SSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 29/230 (12%)
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
+ G IH +KT S P +C+ + + +V D +NA I +
Sbjct: 27 QNGCFIHKPSLKTKIFS-PIFSSCIPIRISATPTRTIDHQVTD---------YNAKILHF 76
Query: 332 AQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
Q G L + K+S+ T+ SVL + S G++ HS I + D
Sbjct: 77 CQLG-DLENAMELICMCKKSELETKTYSSVLQLCAGLK--SFTDGKKVHSIIKSNSVGVD 133
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+G L+ Y G + E +RVF+ ++K+ + W ++S A+ GD++ + FK M
Sbjct: 134 EALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE 193
Query: 452 KGV---RPDS-------------ITFLSVLTVCGRNGMIHKGRHLFDSML 485
KG+ RP+S I++ S+++ NG+ +G ++ M+
Sbjct: 194 KGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMM 243
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/519 (34%), Positives = 289/519 (55%), Gaps = 13/519 (2%)
Query: 126 WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVS 185
+NAI+ G + +E ++ +M+ KG+ D+ + AC + + G+++HG +
Sbjct: 92 YNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQA 151
Query: 186 IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS------MNREDA 239
IKMG + V V N LM Y+ C+V A KVF R+++SWTTMI RE
Sbjct: 152 IKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFARE-G 210
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK-TNFLSEPSVCNCLIT 298
V LF EM + + + +T + ++ + + ++ GR +H I+ +N + V N L+
Sbjct: 211 VGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVD 270
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYT 357
MY + + KVF E+ + ++SWN++ISG AQ G ++ F + + KP+ T
Sbjct: 271 MYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVT 330
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
+VLN+ + L G+ H+++ + + +D +G+AL+DMY K GSI ++ VF
Sbjct: 331 LVAVLNSCANLGVLEL--GKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQA 388
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
K +++TA+I LA HG ++ F EM G+ PD +TF+ VLT C G++ +G
Sbjct: 389 MNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEG 448
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
R F+ M Y++ P +HY CMVD+LGR G + EAEE + +P P VL +LLGAC+
Sbjct: 449 RKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACK 508
Query: 538 IHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGF 597
IHG VE+GE + + K+EP G+YVLMSN+Y+ W LRK MK + + K G
Sbjct: 509 IHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGC 568
Query: 598 SWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
S ++ + +H F GD +HP+ +EIY++ + + S +K
Sbjct: 569 SSIELDGV--IHEFQKGDKSHPKIKEIYKLLDEIMSHLK 605
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 229/461 (49%), Gaps = 29/461 (6%)
Query: 13 ALCIFNNLNNPDIVSWNTVLSGFEKSD----DALSFALRMNLIGVVFDAVTYSTALSFCL 68
AL + L P++ +N ++ G S+ + L +M G+V D T L C
Sbjct: 77 ALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACA 136
Query: 69 DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
+ G ++H +K GL S+VYV N L+ MY+ + AR+VFD P +D VSW
Sbjct: 137 ESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTT 196
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK- 187
++ GY + G + E + EM + L+ D ++ S+C +L LG+++H I+
Sbjct: 197 MIQGYVKMG-FAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRN 255
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDAN---KVFRRMHDRNVISWTTMIS-----MNREDA 239
V VGN L+ Y KC GDAN KVF+ M +NV+SW +MIS +++
Sbjct: 256 SNVNLDVFVGNALVDMYLKC---GDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKES 312
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ +F++M+ GV P+DVT + ++++ + +++ G+ +H + ++ + N L+ M
Sbjct: 313 LYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDM 372
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
YA+ S+ + VF ++ +++ S+ A+I G A +G A+ F + K +P+ TF
Sbjct: 373 YAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTF 432
Query: 359 GSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR-V 414
VL A VG E+ + ++ L+ ++D+ G+ G I E++ +
Sbjct: 433 VGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEH----YGCMVDLLGRAGLINEAEEFI 488
Query: 415 FNETQEKSEFAWTAIISALARHGDY---ESVMNQFKEMENK 452
N E F A++ A HG ESVM + +++E +
Sbjct: 489 RNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPR 529
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 151/284 (53%), Gaps = 10/284 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
M MY A +F+ D+VSW T++ G+ K + + + M + D
Sbjct: 167 MRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADG 226
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T LS C G +LH I++ ++ +V+VGNAL+ MY + G AR+VF
Sbjct: 227 MTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQ 286
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
EMP K+ VSWN+++SG Q G + E++ +M R G++ D V+ + ++C + LE
Sbjct: 287 EMPVKNVVSWNSMISGLAQKGQFK-ESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLE 345
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---S 233
LGK +H + +GN L+ Y+KC A VF+ M+ ++V S+T MI +
Sbjct: 346 LGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLA 405
Query: 234 MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
M+ + A+ LF EM G+ P++VTF+G++ A S LV+EGR
Sbjct: 406 MHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGR 449
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + A +F + ++VSWN+++SG + ++L +M +GV D
Sbjct: 269 VDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDD 328
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT L+ C + G +H+ + + + ++ ++GNAL+ MY++ G + +A VF
Sbjct: 329 VTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQA 388
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD S+ A++ G G G +A+ EM + G+ D V+F +AC H +E
Sbjct: 389 MNRKDVYSYTAMIVGLAMHGQGG-KALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEE 447
Query: 178 GKQ 180
G++
Sbjct: 448 GRK 450
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 12/158 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K G D+A +F +N D+ S+ ++ G + AL M +G+ D
Sbjct: 370 VDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDE 429
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
VT+ L+ C L EG + + ++ + L ++ ++ + R G + EA
Sbjct: 430 VTFVGVLTACSHVGLVEEGRKYFEDMSTI---YNLRPQLEHYGCMVDLLGRAGLINEAEE 486
Query: 114 VFDEMP-NKDSVSWNAILSGYTQDGDYGV-EAILALIE 149
MP D+ A+L G + E+++ IE
Sbjct: 487 FIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIE 524
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/489 (36%), Positives = 289/489 (59%), Gaps = 21/489 (4%)
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
+ C + L+ GKQ+HGV K+G+ VGN ++ YSKC + G+A +VF + RNVI
Sbjct: 12 NKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVI 71
Query: 227 SWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
SW MI+ N E+A++LF+EMR G P+ T+ + A S + EG IH
Sbjct: 72 SWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAAL 131
Query: 282 IKTNF--LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
I+ F L++ +V L+ +Y + M ++ KVFD + + ++SW+ LI GYAQ +L
Sbjct: 132 IRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQED-NLK 190
Query: 340 AVQAFFGVIKESKPNAYTFGSVLNAV-GAAEDISL-KHGQRCHSHIIKV--GLDSDPIVG 395
F ++ES+ F VL+++ G D +L + G++ H++ IKV GL + V
Sbjct: 191 EAMDLFRELRESRHRMDGF--VLSSIIGVFADFALLEQGKQMHAYTIKVPYGL-LEMSVA 247
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+++LDMY K G E+ +F E E++ +WT +I+ +HG + F EM+ G+
Sbjct: 248 NSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIE 307
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
PDS+T+L+VL+ C +G+I +G+ F + + I+P +HY+CMVD+LGR GRL+EA+
Sbjct: 308 PDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKN 367
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
L+ ++P P + + Q+LL CR+HG+VEMG+++ + L++ E +YV++SN+YA G
Sbjct: 368 LIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGY 427
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY----RMAECL 631
W+ +R+ +K KG++KE G SW ++ +H F +GD HP EEI+ M + +
Sbjct: 428 WKESEKIRETLKRKGLKKEAGRSWVEMD--KEIHIFYNGDGMHPLIEEIHEVLKEMEKRV 485
Query: 632 GSEMKYLNS 640
EM Y++S
Sbjct: 486 KEEMGYVHS 494
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 204/381 (53%), Gaps = 24/381 (6%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G Q+H ++ K G D VGN++I MYS+ G + EA RVF+ +P ++ +SWNA+++GYT
Sbjct: 23 GKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYTN 82
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG--YGTH 193
+ + G EA+ EM KG D +++S+ AC G QIH I+ G Y
Sbjct: 83 ERN-GEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQ 141
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRL 248
+V L+ Y KC +A KVF R+ +++V+SW+T+I N ++A+ LF+E+R
Sbjct: 142 SAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRE 201
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF-LSEPSVCNCLITMYARFESMQ 307
+ +I + L+++G+ +H IK + L E SV N ++ MY +
Sbjct: 202 SRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTV 261
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAV 365
+++ +F E+ R ++SW +I+GY ++G+ AV+ F ++E+ +P++ T+ +VL+A
Sbjct: 262 EADALFREMLERNVVSWTVMITGYGKHGIGNKAVE-LFNEMQENGIEPDSVTYLAVLSAC 320
Query: 366 GAAEDISLKHGQR-----CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
+ I K G++ C + IK ++ + ++D+ G+ G + E++ + +
Sbjct: 321 SHSGLI--KEGKKYFSILCSNQKIKPKVEHY----ACMVDLLGRGGRLKEAKNLIEKMPL 374
Query: 421 KSEFA-WTAIISALARHGDYE 440
K W ++S HGD E
Sbjct: 375 KPNVGIWQTLLSVCRMHGDVE 395
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 183/342 (53%), Gaps = 14/342 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G +A +FN L +++SWN +++G+ ++AL+ M G V D
Sbjct: 46 IDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDG 105
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD--SEVYVGNALITMYSRWGRLVEARRVF 115
TYS++L C + G+Q+H+ +++ G ++ V AL+ +Y + R+ EAR+VF
Sbjct: 106 YTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVF 165
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D + K +SW+ ++ GY Q+ D EA+ E+ R+D +S L
Sbjct: 166 DRIEEKSVMSWSTLILGYAQE-DNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALL 224
Query: 176 ELGKQIHGVSIKMGYG-THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
E GKQ+H +IK+ YG +SV N ++ Y KC +T +A+ +FR M +RNV+SWT MI+
Sbjct: 225 EQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITG 284
Query: 235 NRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG-LCIKTNFLS 288
+ AV LF EM+ +G+ P+ VT++ ++ A S L+KEG+ LC
Sbjct: 285 YGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKP 344
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALIS 329
+ C++ + R +++++ + +++ + + W L+S
Sbjct: 345 KVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLLS 386
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 133/263 (50%), Gaps = 5/263 (1%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
+++ S L+ +G+ +HG+ K F V N +I MY++ + ++ +VF+ L R
Sbjct: 10 ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRN 69
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRC 379
+ISWNA+I+GY A+ F + ++ + P+ YT+ S L A A+ + G +
Sbjct: 70 VISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCAD--AAGEGMQI 127
Query: 380 HSHIIKVGLD--SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
H+ +I+ G + V AL+D+Y K + E+++VF+ +EKS +W+ +I A+
Sbjct: 128 HAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQED 187
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
+ + M+ F+E+ R D S++ V ++ +G+ + +K +
Sbjct: 188 NLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVA 247
Query: 498 SCMVDMLGRVGRLEEAEELVGQI 520
+ ++DM + G EA+ L ++
Sbjct: 248 NSVLDMYMKCGLTVEADALFREM 270
>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71420-like [Glycine max]
Length = 782
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 196/615 (31%), Positives = 325/615 (52%), Gaps = 36/615 (5%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKF--GLDSEVYVGNALITMYSRWGRLVEARRVFD 116
TY++ C + G+ LH ++ + ++V++ N +I MY + G L AR VFD
Sbjct: 92 TYASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARYVFD 151
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+M +++ VSW A++SG+ Q G V +L + R + +F S SAC E +++
Sbjct: 152 QMSHRNIVSWTALISGHAQSG--LVRECFSLFSGLLAHFRPNEFAFASLLSAC-EEHDIK 208
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSK--------CEVTGDANKVFRRMHDRNVISW 228
G Q+H V++K+ +V V N L++ YSK + DA +F+ M RN++SW
Sbjct: 209 CGMQVHAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNLVSW 268
Query: 229 TTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-------IGNLVKEGRM 276
+MI+ + + A+ LF M +G+ + T + + +++ I +++
Sbjct: 269 NSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRKCFQ 328
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFES-MQDSEKVFDELSCR-EIISWNALISGYAQN 334
+H L IK+ +SE V LI YA + D ++F + S + +I+SW ALIS +A+
Sbjct: 329 LHCLTIKSGLISEIEVVTALIKSYANLGGHISDCYRIFHDTSSQLDIVSWTALISVFAER 388
Query: 335 GLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
A + F + ++S P+ YTF L A A ++ +H HS +IK G D +
Sbjct: 389 DPEQAFL-LFCQLHRQSYLPDWYTFSIALKA--CAYFVTEQHAMAIHSQVIKKGFQEDTV 445
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+ +AL+ Y + GS+ S++VFNE +W +++ + A HG + + F++M
Sbjct: 446 LCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQM---N 502
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
V PDS TF+++L+ C G++ +G LF+SM D+ + P DHYSCMVD+ GR G++ EA
Sbjct: 503 VCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEA 562
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEK 573
EEL+ ++P P + SLLG+CR HG + + AD ++EP S YV MSN+Y+
Sbjct: 563 EELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLAADKFKELEPNNSLGYVQMSNIYSSG 622
Query: 574 GDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGS 633
G + ++R M VRKE G SW ++G +H F SG HP I E +
Sbjct: 623 GSFTKAGLIRNEMSDFKVRKEPGLSWVEIG--KQVHEFGSGGQYHPNRGAILSRLEIVIG 680
Query: 634 EMKYLNSKRERAIAL 648
++K + E ++AL
Sbjct: 681 QLKEMGYVPELSLAL 695
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 142/526 (26%), Positives = 260/526 (49%), Gaps = 47/526 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS-FALRMNLIG-VVFDAV 58
+NMYCK G A +F+ +++ +IVSW ++SG +S F+L L+ +
Sbjct: 134 INMYCKCGHLAYARYVFDQMSHRNIVSWTALISGHAQSGLVRECFSLFSGLLAHFRPNEF 193
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRL--------VE 110
+++ LS C +H+ G+Q+H++ +K LD+ VYV N+LITMYS+ +
Sbjct: 194 AFASLLSACEEHD-IKCGMQVHAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTPDD 252
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASA-- 168
A +F M ++ VSWN++++ + G G +AI M G+ D + S S+
Sbjct: 253 AWTMFKSMEFRNLVSWNSMIAXFQLRG-LGDKAICLFAHMYCNGIGFDRATLLSVFSSLN 311
Query: 169 -CGHEK--NLELGK--QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
CG N L K Q+H ++IK G + + V L+ +Y+ + G + +R HD
Sbjct: 312 ECGAFDVINTYLRKCFQLHCLTIKSGLISEIEVVTALIKSYAN--LGGHISDCYRIFHDT 369
Query: 224 ----NVISWTTMISM----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
+++SWT +IS+ + E A LF ++ P+ TF + A + +
Sbjct: 370 SSQLDIVSWTALISVFAERDPEQAFLLFCQLHRQSYLPDWYTFSIALKACAYFVTEQHAM 429
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
IH IK F + +CN L+ YAR S+ SE+VF+E+ C +++SWN+++ YA +G
Sbjct: 430 AIHSQVIKKGFQEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHG 489
Query: 336 LSLAAVQAFFGVIKESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDP 392
+ A++ F + P++ TF ++L+A VG ++ H + LD
Sbjct: 490 QAKDALELFQQM--NVCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDH-- 545
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDY---ESVMNQFKE 448
S ++D+YG+ G IFE++ + + K + W++++ + +HG+ + ++FKE
Sbjct: 546 --YSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLAADKFKE 603
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
+E +S+ ++ + + G K L + + D+ + P
Sbjct: 604 LEPN----NSLGYVQMSNIYSSGGSFTKAG-LIRNEMSDFKVRKEP 644
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 209/643 (32%), Positives = 345/643 (53%), Gaps = 40/643 (6%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTA 63
Y ++G+ +AL +F + VS+N ++SG+ ++ + L ++FD +
Sbjct: 69 YMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGE-------FELARMLFDEMPERDL 121
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGL--DSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
+S+ + +G++ L F + +V N +++ Y++ G + +ARRVFD MP K
Sbjct: 122 VSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEK 181
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
+ VSWNA+LS Y Q+ +L R+ L VS+ +K + +Q
Sbjct: 182 NDVSWNALLSAYVQNSKLEEACVLF---GSRENWAL--VSWNCLLGGFVKKKKIVEARQF 236
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNR-- 236
S+K+ V N +++ Y++ +A ++F +V +WT M+S NR
Sbjct: 237 FD-SMKV---RDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMV 292
Query: 237 EDAVSLFKEMRLDGVCP--NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
E+A LF M P N+V++ ++ G V+ + + + N S N
Sbjct: 293 EEARELFDRM------PERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNV----STWN 342
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
+IT YA+ + +++ +FD++ R+ +SW A+I+GY+Q+G S A++ F + +E +
Sbjct: 343 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRL 402
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N +F S L+ A+ ++L+ G++ H ++K G ++ VG+ALL MY K GSI E+
Sbjct: 403 NRSSFSSALST--CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 460
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F E K +W +I+ +RHG E + F+ M+ +G++PD T ++VL+ C G+
Sbjct: 461 LFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGL 520
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ KGR F +M +DY + P+ HY+CMVD+LGR G LEEA L+ +P P ++ +LL
Sbjct: 521 VDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLL 580
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
GA R+HGN E+ E AD + MEP SG YVL+SNLYA G W V LR M+ KGV+K
Sbjct: 581 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 640
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G+SW ++ + H FS GD HP +EI+ E L MK
Sbjct: 641 VPGYSWIEIQ--NKTHTFSVGDEFHPEKDEIFAFLEDLDLRMK 681
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 216/470 (45%), Gaps = 31/470 (6%)
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
DS++ N I+ Y R GR EA RVF MP SVS+NA++SGY ++G++ + +L
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARML-FD 114
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
EM + D VS+ G+ +N LGK + V N ++S Y++
Sbjct: 115 EMPER----DLVSWNVMIK--GYVRNRNLGKARE--LFERMPERDVCSWNTILSGYAQNG 166
Query: 209 VTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEMRLDGVCP---NDVTFIGLIHAI 265
DA +VF RM ++N +SW ++S + + +L+ C + + +
Sbjct: 167 CVDDARRVFDRMPEKNDVSWNALLS-------AYVQNSKLEEACVLFGSRENWALVSWNC 219
Query: 266 SIGNLVKEGRMIHGLCIKTNFLSEPSVC-NCLITMYARFESMQDSEKVFDELSCREIISW 324
+G VK+ +++ + V N +IT YA+ + ++ ++FDE ++ +W
Sbjct: 220 LLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTW 279
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII 384
A++SGY QN + A + F + + N ++ ++L E + + +
Sbjct: 280 TAMVSGYIQNRMVEEARELF---DRMPERNEVSWNAMLAGYVQGERVEMA------KELF 330
Query: 385 KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMN 444
V + + ++ Y + G I E++ +F++ ++ +W A+I+ ++ G +
Sbjct: 331 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALR 390
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDML 504
F ME +G R + +F S L+ C + G+ L ++K + E + ++ M
Sbjct: 391 LFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY-ETGCFVGNALLLMY 449
Query: 505 GRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
+ G +EEA +L ++ G +S + G R HG E R +++ +
Sbjct: 450 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR-HGFGEEALRFFESMKR 498
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 177/544 (32%), Positives = 306/544 (56%), Gaps = 10/544 (1%)
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
+L C++ + G +H+ I+ G S +++ LI YS+ G V AR+VFD MP +
Sbjct: 3 SLQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERT 62
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSW+A +SGY+Q+G Y +A+L ++M+R G + + ++ S AC + L+ G QI
Sbjct: 63 VVSWSAQISGYSQNGCYQ-DALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQ 121
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----RE 237
G K + +++ V + L+ +SKC DA+ +F M +R+V+SW +I
Sbjct: 122 GCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSG 181
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
D+ +F+ M +G+ P+ TF ++ A + + V IH L I+ + S S+ LI
Sbjct: 182 DSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLI 241
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNA 355
YA+ ES+ + ++ + +++IS AL++GYA++ + F I++ K +
Sbjct: 242 DAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDD 301
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
S+ N +S+ G++ H+ +K D +G+AL+DMY K G I ++ R F
Sbjct: 302 VILCSMFNICANISSLSV--GRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAF 359
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
NE +EK+ +WT++I+ HG + FK+ME +G++P+ ITFLS+L C G+
Sbjct: 360 NEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTG 419
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
+G F++M+ Y+I P +H+SCMVD+ R G LEEA L+ ++ P S+ ++LGA
Sbjct: 420 EGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGA 479
Query: 536 CRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEV 595
C I+GN+ + E A L KM+P S +YV+++++YA G W+ +RK M+ + ++K
Sbjct: 480 CYIYGNMPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAP 539
Query: 596 GFSW 599
G+S+
Sbjct: 540 GYSF 543
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 230/460 (50%), Gaps = 19/460 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y K G A +F+ + +VSW+ +SG+ ++ DAL L M G + TY
Sbjct: 42 YSKLGDTVSARKVFDRMPERTVVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTY 101
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ L C G+Q+ + K S + V +AL+ ++S+ G++ +A +F M
Sbjct: 102 GSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEE 161
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D VSWNAI+ Y G G ++ MM++G+ D +F S A G ++ Q
Sbjct: 162 RDVVSWNAIIGAYAVQGFSG-DSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQ 220
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-- 238
IH + I++GYG+H+S+ L+ Y+KCE A+ +++ M +++IS T +++ D
Sbjct: 221 IHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSN 280
Query: 239 ----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
A+ LFKE++ + +DV + + + + + GR IH L +K + ++ N
Sbjct: 281 YSSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGN 340
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI MYA+ ++D+ + F+E+ + +ISW +LI+GY +G A+ F + E KP
Sbjct: 341 ALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKP 400
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSIFESQ 412
N TF S+L A G C +++I K + S ++D++ + G + E+
Sbjct: 401 NDITFLSLLFACNHCGLTG--EGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAY 458
Query: 413 RVFNETQEKSEFA-WTAIISALARHGDY----ESVMNQFK 447
+ N+ K + W AI+ A +G+ E+ ++ FK
Sbjct: 459 NLINKMNIKPNASLWGAILGACYIYGNMPLAEEAAIHLFK 498
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 195/383 (50%), Gaps = 13/383 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++++ K G+ + A +F + D+VSWN ++ + S D+ M G+ D
Sbjct: 140 LDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGMSPDL 199
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L + Q+H LI++ G S + + +LI Y++ L A ++
Sbjct: 200 FTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKS 259
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP KD +S A+++GY +D +Y +A+ E+ + +++D V S + C + +L +
Sbjct: 260 MPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLSV 319
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+QIH +++K V++GN L+ Y+K DAN+ F M ++NVISWT++I+
Sbjct: 320 GRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGS 379
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEPS 291
+ +A++LFK+M +G+ PND+TF+ L+ A + L EG + + K N L
Sbjct: 380 HGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNNMISKYNILPRAE 439
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG---YAQNGLSLAAVQAFFGV 347
+C++ ++AR ++++ + ++++ + S W A++ Y L+ A F +
Sbjct: 440 HFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIYGNMPLAEEAAIHLFKM 499
Query: 348 IKESKPNAYTFGSVLNAVGAAED 370
E+ N + A G+ ++
Sbjct: 500 DPENSVNYVVLADIYAAAGSWDN 522
>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
Length = 800
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 201/652 (30%), Positives = 354/652 (54%), Gaps = 47/652 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDAVTY 60
Y K G+ A +F+ + D VSWNT+++G F + AL F M G D ++
Sbjct: 44 YAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSF 103
Query: 61 STALS--FCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ L C+ G++ G Q+HS+IVK G + V+ G+AL+ MY++ R+ +A VF
Sbjct: 104 GSILKGVACV---GYVEVGQQVHSMIVKIGYEGNVFAGSALLDMYAKCERVEDAFEVFKS 160
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++SV+WNA++SGY GD G A L M +G+ +D +F + +L
Sbjct: 161 INIRNSVTWNALISGYAHVGDRGT-AFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKL 219
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR-RMHDRNVISWTTMIS--- 233
Q+H +K G + +V N +++ YS+C DA +VF + R++++W +M++
Sbjct: 220 TTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYL 279
Query: 234 MNREDAVSLFKE--MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+N ++ + M++ G P+ T+ +I A +G+ +HGL IK
Sbjct: 280 VNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVP 339
Query: 292 VCNCLITMYARF--ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ N LI MY + +SM ++ +F+ L ++ +SWN++++G++Q+GLS A++ FF ++
Sbjct: 340 ISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALK-FFENMR 398
Query: 350 ESKP--NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ Y F +VL + ++ +L+ GQ+ H G
Sbjct: 399 SQYVVIDHYAFSAVLRS--CSDLATLQLGQQVHVLC----------------------GV 434
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I ++++ F+ T + S AW ++I A+HG + ++ F M+++ V+ D ITF++VLT
Sbjct: 435 IEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTA 494
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ +G SM DY I P +HY+CM+D+LGR GRL+EA+ L+ +P P
Sbjct: 495 CSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAM 554
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V ++LLGACR G++E+ ++A L+++EP +YVL+S+++ W A +++ MK
Sbjct: 555 VWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMK 614
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLN 639
+GV+K G+SW +V + +H F++ D +HP EEIY L E++ L+
Sbjct: 615 ERGVKKVPGWSWIEVK--NEVHSFNAEDRSHPNCEEIYLRLGDLMEEIRRLD 664
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/433 (30%), Positives = 225/433 (51%), Gaps = 25/433 (5%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H L +K G + +Y N +I+ Y++ G + A ++FDE +D+VSWN +++G G++
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNF 81
Query: 140 GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
A+ L M R G +D SF S +E+G+Q+H + +K+GY +V G+
Sbjct: 82 ET-ALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSA 140
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPN 254
L+ Y+KCE DA +VF+ ++ RN ++W +IS +R A L M L+GV +
Sbjct: 141 LLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEID 200
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
D TF L+ + +L K +H +K S+ +VCN +IT Y+ S++D+E+VFD
Sbjct: 201 DGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFD 260
Query: 315 -ELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDIS 372
+ R++++WN++++ Y N A + F + + +P+ YT+ SV++A A E
Sbjct: 261 GAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISA--AFEXAH 318
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK--RGSIFESQRVFNETQEKSEFAWTAII 430
G+ H +IK GL+ + ++L+ MY K S+ E+ +F + K +W +I+
Sbjct: 319 QGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSIL 378
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC--------GRN-----GMIHKG 477
+ ++ G E + F+ M ++ V D F +VL C G+ G+I
Sbjct: 379 TGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLCGVIEDA 438
Query: 478 RHLFDSMLKDYHI 490
R FD+ KD I
Sbjct: 439 RKSFDATPKDSSI 451
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 220/471 (46%), Gaps = 50/471 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK-SDDALSFALR--MNLIGVVFDA 57
++MY K + + A +F ++N + V+WN ++SG+ D +F L M L GV D
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDD 201
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD- 116
T++ L+ D + Q+H+ IVK GL S+ V NA+IT YS G + +A RVFD
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +D V+WN++L+ Y + + EA +EM G D ++TS SA +
Sbjct: 262 AIETRDLVTWNSMLAAYLVN-NQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQG 320
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTY--SKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
GK +HG+ IK G V + N L++ Y S + +A +F + +++ +SW +++
Sbjct: 321 QGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTG 380
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
S EDA+ F+ MR V + F ++ + S ++ G+ +H LC
Sbjct: 381 FSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLC-------- 432
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI- 348
++D+ K FD I+WN+LI GYAQ+G A+ FF +
Sbjct: 433 --------------GVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKD 478
Query: 349 KESKPNAYTFGSVLNA---VGAAED--ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ K + TF +VL A +G E+ LK + + G+ + ++D+ G
Sbjct: 479 RRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDY------GIPPRMEHYACMIDLLG 532
Query: 404 KRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE---SVMNQFKEME 450
+ G + E++ + E W ++ A GD E V + E+E
Sbjct: 533 RAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELE 583
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 198/577 (34%), Positives = 318/577 (55%), Gaps = 17/577 (2%)
Query: 53 VVFDAVT--YSTALSFCLDHEGFLFGL-QLHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
V+FD T +S + ++ L+ L L ++H+L+V G + + LI +
Sbjct: 19 VLFDFRTNYHSRSFNYLLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTM 78
Query: 110 E-ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAAS 167
+ AR++FD+MP +D WN ++ GY G E LAL M GL D+ +F
Sbjct: 79 DYARKMFDQMPKRDVFLWNTLIRGYADAGP--CEEALALYSNMHGAGLFPDNYTFPFVVR 136
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
+C L GK++H +K G+ + V V + L++ YS+ T VF M RN++S
Sbjct: 137 SCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVS 196
Query: 228 WTTMIS---MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
WT +I+ NR ++ + +F+EM G PN VT + ++ A + + G++IHG I
Sbjct: 197 WTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGI 256
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K + S+ N LI +Y + +++ + +FD + + ++SWNA+I+ Y QN AV+
Sbjct: 257 KLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVK 316
Query: 343 AFFGVIKESKPNAY-TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F + E Y T SV++A + +L G+ H + + GL+ + + +AL+DM
Sbjct: 317 LFRRMQAEKVDFDYITMVSVISACASLG--ALNTGRWMHELVKRKGLEINVSITNALIDM 374
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K G+I ++ VF +S +WT++I A A HG E + F M+++GV+P+S TF
Sbjct: 375 YAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTF 434
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+V T C +G++ +GR F+SM++DY I P +H +CMVD+LGR G L EA E + ++P
Sbjct: 435 AAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMP 494
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAI 581
P +SV +LLG+CRIH N+E+ E +A+ L ++P YVLMSN+YAE G WE A
Sbjct: 495 VEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAAR 554
Query: 582 LRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTH 618
LRK M+ + ++K G S +V H F SG +
Sbjct: 555 LRKLMEERELKKIPGHSLVEVN--RRFHTFLSGSRSQ 589
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 238/475 (50%), Gaps = 20/475 (4%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYS 61
C + D A +F+ + D+ WNT++ G+ + ++AL+ M+ G+ D T+
Sbjct: 73 CLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFP 132
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
+ C G ++H IVK G DS+V+V ++L+ MYS+ G + VF EM +
Sbjct: 133 FVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVR 192
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
+ VSW A+++GY Q+ Y E + EM+ G + + V+ S AC + L LGK I
Sbjct: 193 NIVSWTAVIAGYVQN-RYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLI 251
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE---- 237
HG IK+G VS+ N L++ Y KC A +F M +N++SW MI+ +
Sbjct: 252 HGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAG 311
Query: 238 -DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
+AV LF+ M+ + V + +T + +I A + + GR +H L + S+ N L
Sbjct: 312 ANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNAL 371
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
I MYA+ ++ + +VF+ L CR ++SW ++I A +G A++ F + E KPN+
Sbjct: 372 IDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNS 431
Query: 356 YTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
+TF +V A G E+ + I G++ + ++D+ G+ GS+ E+
Sbjct: 432 FTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEH----CACMVDLLGRAGSLMEAY 487
Query: 413 RVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
++ + + + W A++ + H + E + + + + P ++TF +++
Sbjct: 488 EFIDKMPVEPDVSVWGALLGSCRIHSNLE--LAELVAEKLFLLDPQTVTFYVLMS 540
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 179/353 (50%), Gaps = 14/353 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
MY +SG+ +F + +IVSW V++G+ ++ + L M G +AVT
Sbjct: 172 MYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVT 231
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ L C E G +H +K G+D +V + NALI +Y + G + AR +FD M
Sbjct: 232 LVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMV 291
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ VSWNA+++ Y Q+ + G A+ M + + D+++ S SAC L G+
Sbjct: 292 VQNLVSWNAMIAAYEQN-NAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGR 350
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM----- 234
+H + + G +VS+ N L+ Y+KC A +VF R+ R+V+SWT+MI
Sbjct: 351 WMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHG 410
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV-- 292
+ EDA+ LF M+ +GV PN TF + A LV+EGR H + ++ P V
Sbjct: 411 HGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRK-HFESMMRDYSIMPGVEH 469
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIIS-WNALI-SGYAQNGLSLAAVQA 343
C C++ + R S+ ++ + D++ +S W AL+ S + L LA + A
Sbjct: 470 CACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVA 522
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G D A +F L +VSW +++ +DAL RM GV ++
Sbjct: 372 IDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNS 431
Query: 58 VTYSTALSFCLDHEGFLFGLQLH--SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T++ + C H G + + H S++ + + V ++ + R G L+EA
Sbjct: 432 FTFAAVFTAC-RHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFI 490
Query: 116 DEMPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMRKGLRL 157
D+MP + VS W A+L G + + L L E++ + L L
Sbjct: 491 DKMPVEPDVSVWGALL------GSCRIHSNLELAELVAEKLFL 527
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 195/600 (32%), Positives = 317/600 (52%), Gaps = 27/600 (4%)
Query: 36 EKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVG 95
E D L A R +GV+ A C + G +LH ++ +V
Sbjct: 93 ESDDVVLDSAQRSEAMGVLLQA---------CGQRKDIEVGRRLHEMVSASTQFCNDFVL 143
Query: 96 NA-LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY--GVEAILALIEMMR 152
N +ITMYS G ++R VFD++ K+ WNAI+S YT++ + + LI +
Sbjct: 144 NTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTE 203
Query: 153 KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD 212
+ D+ + AC +L LG+ IHG++ KM + V VGN L++ Y KC + +
Sbjct: 204 H--KPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEE 261
Query: 213 A-NKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
A +VF M + V SW ++ + + A+ L+ +M G+ P+ T L+ A S
Sbjct: 262 AVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 321
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNA 326
+ G IHG ++ +P + L+++Y ++ +FD + R ++SWN
Sbjct: 322 RMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNV 381
Query: 327 LISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHII 384
+I+GY+QNGL A+ F ++ + +P +++ GA +S L+ G+ H +
Sbjct: 382 MIAGYSQNGLPDEAINLFRQMLSDGIQPYEI---AIMCVCGACSQLSALRLGKELHCFAL 438
Query: 385 KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMN 444
K L D V S+++DMY K G I SQR+F+ +EK +W II+ HG + +
Sbjct: 439 KAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALE 498
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDML 504
F++M G++PD TF +L C G++ G F+ ML ++IEP +HY+C+VDML
Sbjct: 499 LFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDML 558
Query: 505 GRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYV 564
GR GR+++A L+ ++PG P + SLL +CRIHGN+ +GE++A+ L+++EP +YV
Sbjct: 559 GRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYV 618
Query: 565 LMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
L+SNL+A G W+ V +R MK G++K+ G SW +VG +H F GD P EE+
Sbjct: 619 LISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVG--GKVHNFLIGDEMLPELEEV 676
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 247/483 (51%), Gaps = 25/483 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALS-FALRMNLIGVVFD 56
+ MY G + +F+ L ++ WN ++S + ++ +DA+S F+ +++ D
Sbjct: 148 ITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPD 207
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA-RRVF 115
T + C G +H + K L S+V+VGNALI MY + G + EA +RVF
Sbjct: 208 NFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVF 267
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D M K SWNA+L GY Q+ D +A+ ++M GL D + S AC K+L
Sbjct: 268 DLMDTKTVSSWNALLCGYAQNSD-PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSL 326
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
G++IHG +++ G +G L+S Y C A +F M R+++SW MI
Sbjct: 327 HYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGY 386
Query: 233 SMN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
S N ++A++LF++M DG+ P ++ + + A S + ++ G+ +H +K + +
Sbjct: 387 SQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDI 446
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + +I MYA+ + S+++FD L +++ SWN +I+GY +G A++ F +++
Sbjct: 447 FVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRL 506
Query: 351 S-KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
KP+ +TF +L A G ED Q + H I+ L+ + ++DM G+ G
Sbjct: 507 GLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEH----YTCVVDMLGRAG 562
Query: 407 SIFESQRVFNETQ-EKSEFAWTAIISALARHGDY---ESVMNQFKEMENKGVRPDSITFL 462
I ++ R+ E + W++++S+ HG+ E V N+ E+E + +P++ +
Sbjct: 563 RIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPE--KPENYVLI 620
Query: 463 SVL 465
S L
Sbjct: 621 SNL 623
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 179/577 (31%), Positives = 310/577 (53%), Gaps = 17/577 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G QLH+ ++KFG + + N ++++Y + +A+++F+E+P ++ VSWN ++
Sbjct: 79 GKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVG 138
Query: 136 DGDYGVEAILALI-----EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
D + + L M+ + + DH++F C ++E+G Q+H ++K+G+
Sbjct: 139 RNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGF 198
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKE 245
VG L+ Y+KC +A +VF + R+++ W M+S E+A +F
Sbjct: 199 DLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNS 258
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
MRLD V ++ TF L+ IS L G+ +H L ++ +F S+ V + LI MYA+
Sbjct: 259 MRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKS 318
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVL 362
E++ D+ +VFDE+S R +++WN +I G+ +G ++ +++E P+ T S++
Sbjct: 319 ENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSII 378
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
++ G A I+ + H+ +K+ V ++L+ Y K GSI + + F T +
Sbjct: 379 SSCGYASAIT--ETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPD 436
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
WT++I A A HG E F++M + G++PD I FL VL+ C G++ KG H F
Sbjct: 437 LVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFK 496
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
M Y I P +HY+C+VD+LGR G + EA E++ +P L + +G+C++H N+
Sbjct: 497 LMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSCKLHSNM 556
Query: 543 EMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADV 602
E+ + A+ L +EP S +Y +MSN++A + W V +RK M+ K K G SW ++
Sbjct: 557 ELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVPGCSWIEI 616
Query: 603 GDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLN 639
G + +H F S D +HP + E+Y L MK N
Sbjct: 617 G--NQIHSFVSNDKSHPNALEMYVTLNMLLRPMKEQN 651
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 200/422 (47%), Gaps = 35/422 (8%)
Query: 159 HVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR 218
H+ ++A + L GKQ+H IK G+ +S+ N ++S Y KC+ DA K+F
Sbjct: 60 HLFCSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFE 119
Query: 219 RMHDRNVISWTTMI--SMNRED---------AVSLFKEMRLDGVCPNDVTFIGLIHAISI 267
+ RNV+SW MI S+ R D S F+ M L+ + P+ +TF GLI +
Sbjct: 120 ELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQ 179
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
N ++ G +H +K F + V L+ +YA+ ++++ +VF ++SCR+++ WN +
Sbjct: 180 FNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVM 239
Query: 328 ISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
+S Y N L A + F + + + +TF S+L+ + G++ HS +++
Sbjct: 240 VSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQ 299
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
DSD +V SAL++MY K +I +++RVF+E ++ AW +I HGD VM
Sbjct: 300 SFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLV 359
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
KEM +G PD +T S+++ CG I + + +K SC D L
Sbjct: 360 KEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVK----------LSCQ-DFLSV 408
Query: 507 VGRLEEAEELVGQIPGG---------PGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
L A G I P L SL+ A HG + E+ + KM
Sbjct: 409 ANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHG---LAEKSTEMFEKMLS 465
Query: 558 AG 559
G
Sbjct: 466 YG 467
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 212/429 (49%), Gaps = 21/429 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---------ALSFALRMNLI 51
+++Y K + + A +F L ++VSWN ++ +D S+ RM L
Sbjct: 102 LSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLE 161
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
+V D +T++ + C G+QLH VK G D + +VG AL+ +Y++ G + A
Sbjct: 162 MMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENA 221
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
RRVF ++ +D V WN ++S Y + EA M + D +F+S S
Sbjct: 222 RRVFCDVSCRDLVMWNVMVSCYVFNS-LPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISD 280
Query: 172 E--KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
+ + + GKQ+H + ++ + + V V + L++ Y+K E DA +VF M RNV++W
Sbjct: 281 DALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWN 340
Query: 230 TMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
TMI + + + L KEM +G P+++T +I + + + E +H +K
Sbjct: 341 TMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKL 400
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
+ SV N LI+ Y++ S+ + K F+ S ++++W +LI YA +GL+ + + F
Sbjct: 401 SCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMF 460
Query: 345 FGVIKES-KPNAYTFGSVLNAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVGSALLDMY 402
++ KP+ F VL+A ++ H + ++ ++ DS+ + L+D+
Sbjct: 461 EKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHY--TCLVDLL 518
Query: 403 GKRGSIFES 411
G+ G I E+
Sbjct: 519 GRYGLINEA 527
>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 206/680 (30%), Positives = 349/680 (51%), Gaps = 57/680 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++ Y K G A +F+ L+ P++VS+ ++SGF KSD +A+ M G+ +
Sbjct: 137 ISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNE 196
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L+ C+ + + G Q+H ++VK GL S V++ NAL+ +Y + G L R+F+E
Sbjct: 197 YTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEE 256
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEM-MRKGLRLDHVSFTSAASACGHEKNLE 176
MP +D SWN ++S ++ Y EA M + KGL++DH S ++ +AC
Sbjct: 257 MPERDITSWNTVISSLVKEFKYD-EAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPM 315
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+Q+H +++K+G +H+SV + L+ Y+KC D +F M R+VI+WT MI+
Sbjct: 316 KGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYM 375
Query: 234 -----------------------------MNRED----AVSLFKEMRLDGVCPNDVTFIG 260
++R D A+ LF EM +GV +D T
Sbjct: 376 EFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTS 435
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
+I A + K + I G +K LS + L+ MY R M+D+EK+F + S
Sbjct: 436 IITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLEN 495
Query: 321 IIS--WNALISGYAQNGLSLAAVQAFF-----GVIKESKPNAYTFGSVLNAVGAAEDISL 373
+ ++I GYA+NG A+ F G I + + + S+ ++G E
Sbjct: 496 DYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHE---- 551
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
G++ H H +K GL ++ VG+A + MY K ++ ++ RVFN + +W +++
Sbjct: 552 -MGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGH 610
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN--GMIHKGRHLFDSMLKDYHIE 491
H + + +K+ME G++PDSITF +++ ++ R LF SM +++I+
Sbjct: 611 VLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIK 670
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
P+ +HY+ + +LGR G LEEAE+ + +P P + V ++LL +CRI+ N + + A
Sbjct: 671 PTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARN 730
Query: 552 LMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGF 611
++ +EP SY+L SNLY+ G W +R+ M+ KG RK SW + + +H F
Sbjct: 731 ILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSW--IIHENKIHSF 788
Query: 612 SSGDNTHPRSEEIYRMAECL 631
+ D +HP+ ++IY E L
Sbjct: 789 YARDRSHPQGKDIYSGLEIL 808
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 222/450 (49%), Gaps = 48/450 (10%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H+ +K L+ ++++GNALI+ Y + G + +A +VF + + VS+ A++SG+++ D
Sbjct: 119 VHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK-SD 175
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+ EA+ M+ G+ + +F + +AC + +LG Q+HG+ +K+G + V + N
Sbjct: 176 WEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICN 235
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRL-DGVC 252
LM Y KC ++F M +R++ SW T+IS ++A F+ M+L G+
Sbjct: 236 ALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLK 295
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
+ + L+ A + +G+ +H L +K S SV + LI Y + S D +
Sbjct: 296 VDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDL 355
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAED-- 370
F+ + R++I+W +I+ Y + G+ +AV+ F K K N ++ +VL + +D
Sbjct: 356 FETMPIRDVITWTGMITSYMEFGMLDSAVEVFN---KMPKRNCISYNAVLAGLSRNDDGS 412
Query: 371 -------------------------------ISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
S K Q+ ++K G+ S+ + +AL+
Sbjct: 413 RALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALV 472
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFA--WTAIISALARHGDYESVMNQFKEMENKG-VRP 456
DMY + G + +++++F + ++++ T++I AR+G ++ F +++G +
Sbjct: 473 DMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVM 532
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
D + S+L++CG G G+ + LK
Sbjct: 533 DEVMSTSILSLCGSIGFHEMGKQMHCHALK 562
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 122/233 (52%), Gaps = 11/233 (4%)
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N LI+ Y + ++D++KVF LSC ++S+ ALISG++++ AV+ FF ++ +
Sbjct: 134 NALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIE 193
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN YTF ++L A D L G + H ++K+GL S + +AL+ +Y K G +
Sbjct: 194 PNEYTFVAILTACIRNMDYQL--GSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVL 251
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCGRN 471
R+F E E+ +W +IS+L + Y+ + F+ M+ KG++ D + ++LT C +
Sbjct: 252 RLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGS 311
Query: 472 GMIHKGRHLFDSMLK---DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
KG+ L LK + H+ S S ++ + G + +L +P
Sbjct: 312 VKPMKGQQLHALALKVGLESHLSVS----SSLIGFYTKCGSANDVTDLFETMP 360
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 312/578 (53%), Gaps = 24/578 (4%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H+ ++K G E +V + L+ +Y++ G +V AR+VFD +P ++ V W +++GY Q+
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
V A+ +M+ G + + + A +AC +++ LGKQ H IK S+GN
Sbjct: 62 PEV-AVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGN 120
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDA-----VSLFKEMRLDGVCP 253
L S YSK + K FR +++VISWTT+IS ++ + LF EM + V P
Sbjct: 121 ALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEP 180
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
ND T ++ S G +H L K S + N L+ +Y + + +++ +F
Sbjct: 181 NDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLF 240
Query: 314 DELSCREIISWNALISGYAQNGLSLA---------AVQAFFGVIKES----KPNAYTFGS 360
+ + + +I+WNA+I+G+AQ + LA +A +K + KP+ +T S
Sbjct: 241 NRMEYKNLITWNAMIAGHAQ-AMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSS 299
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
+L + +L+ G++ H+ IK G SD +VG+AL+DMY K GSI +++ F +
Sbjct: 300 ILTV--CSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMST 357
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
++ +WT++I++ ARHG + + F++M G RP+ ITF+ VL C GM+ +
Sbjct: 358 RTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEY 417
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
F+ M K+Y I+P DHY C+VDM R+GRL+EA +++ ++ P + L+ CR HG
Sbjct: 418 FEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHG 477
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
N E+G A+ L+K++P + +YV++ N+Y WE V+++R+ MK + V K W+
Sbjct: 478 NEELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLK--DWS 535
Query: 601 DVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+ +H F + + H + E++ + L K L
Sbjct: 536 RISIKGEVHSFKTNNRLHNHNAELHTLLNDLVDRAKSL 573
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 238/465 (51%), Gaps = 31/465 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFALRMNLI--GVVFDA 57
+N+Y K G A +F+NL ++V W T+++G+ + S ++ + +++ G
Sbjct: 22 VNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPSN 81
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S AL+ C E G Q H+ I+K+ + + +GNAL ++YS++G L + + F E
Sbjct: 82 FTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRE 141
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
KD +SW I+S +G G+ + IEM+ + + + + TS S C ++ +L
Sbjct: 142 TGEKDVISWTTIISACGDNGRAGM-GLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDL 200
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G Q+H +S K+G+ +++ + N L+ Y KC +A +F RM +N+I+W MI+ + +
Sbjct: 201 GMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQ 260
Query: 238 ----------------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+A+ ++ ++ G P+ T ++ S +++G IH
Sbjct: 261 AMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQT 320
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IK+ FLS+ V L+ MY + S++ + K F ++S R +ISW ++I+ +A++G S A+
Sbjct: 321 IKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHAL 380
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAA--EDISLKHGQRCHSHIIKVGLDSDPIVG--S 396
Q F + + +PN TF VL A A D +L++ + I++ P++
Sbjct: 381 QLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFE-----IMQKEYKIKPVMDHYG 435
Query: 397 ALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
L+DM+ + G + E+ V E +EF W +I+ HG+ E
Sbjct: 436 CLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEE 480
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 106/194 (54%), Gaps = 3/194 (1%)
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
M+H IKT E V + L+ +YA+ M ++ KVFD L R ++ W L++GY QN
Sbjct: 1 MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60
Query: 336 LSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
AV+ F +++ S P+ +T LNA + E I+L G++ H+ IIK + D +
Sbjct: 61 QPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITL--GKQFHAFIIKYRISHDSSI 118
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
G+AL +Y K GS+ S + F ET EK +WT IISA +G + F EM + V
Sbjct: 119 GNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENV 178
Query: 455 RPDSITFLSVLTVC 468
P+ T SVL++C
Sbjct: 179 EPNDFTLTSVLSLC 192
>gi|297841909|ref|XP_002888836.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334677|gb|EFH65095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 744
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 190/609 (31%), Positives = 321/609 (52%), Gaps = 35/609 (5%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIV--KFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y+ C D G+ LH ++ + V + N LITMY++ G ++ AR+VFD
Sbjct: 62 YAALFQACADQRNLRDGINLHHHMLSHPYCYSQNVILANYLITMYAKCGNILYARQVFDT 121
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ VSW A+++GY Q G+ + L M + + +S + C +E
Sbjct: 122 MPERNVVSWTALITGYAQAGNE--QDGFCLFSSMLAHCCPNEFALSSVLTLCRYEP---- 175
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE---VTGDANKVFRRMHDRNVISWTTMISM 234
GKQ+HG+++K+G + V N L+S Y +C +A VF M +N+++W +MI+
Sbjct: 176 GKQVHGLALKLGLYCSIYVANALISMYGRCHDGTAAYEAWTVFEAMEFKNLVTWNSMIAA 235
Query: 235 NR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAI------SIGNLVKEGRMIHGLCIK 283
+ + A+ +F M DGV + T + + + + K +H L +K
Sbjct: 236 FQCCNLGKQAIGVFMRMHSDGVGFDRATVLNICTTLYKSSDLDPDQVSKCCLQLHSLTVK 295
Query: 284 TNFLSEPSVCNCLITMYAR-FESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAV 341
+ +++ V L+ +Y+ D K+F E+S CR+I++W +I+ +A A +
Sbjct: 296 SGLVTQTEVATALVKVYSEILGEFTDCYKLFMEMSHCRDIVAWTGIITAFAVYDPERAIL 355
Query: 342 QAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
FG ++ K P+ YTF SVL A ++ +H H+ +IK G +D +V ++L+
Sbjct: 356 --LFGQLRHEKLSPDWYTFSSVLKACAGL--VTARHALSIHAQVIKGGFATDTVVNNSLI 411
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
Y K GS+ +RVF++ + +W +++ A + HG +S++ F++M+ ++PDS
Sbjct: 412 HAYAKCGSLDLCKRVFDDMDSRDVVSWNSLLKAYSLHGQVDSILPVFQKMD---IKPDSA 468
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
TF+++L+ C G + +G +F SM + P +HY+C++DMLGR R EAEE++ Q
Sbjct: 469 TFIALLSACSHAGRVKEGLRIFRSMFEKPETLPQLNHYACVIDMLGRAERFAEAEEVIKQ 528
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P GP V +LLG+CR HGN ++G+ AD L ++EP S SY+ MSN+Y + +
Sbjct: 529 MPMGPDAVVWSTLLGSCRKHGNTQLGKLAADKLKEIEPTNSLSYIQMSNIYNAESSFNEG 588
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLN 639
K M++ VRKE G S ++G + +H F+SG P E I R E L S +K +
Sbjct: 589 NKSIKEMETWRVRKEPGLSCTEIG--NKVHEFTSGGRCRPDREAICRELERLISRLKEMG 646
Query: 640 SKRERAIAL 648
E AL
Sbjct: 647 YVPEMRSAL 655
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 237/475 (49%), Gaps = 37/475 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS-DDALSFALRMNLIG-VVFDAV 58
+ MY K G A +F+ + ++VSW +++G+ ++ ++ F L +++ +
Sbjct: 103 ITMYAKCGNILYARQVFDTMPERNVVSWTALITGYAQAGNEQDGFCLFSSMLAHCCPNEF 162
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW---GRLVEARRVF 115
S+ L+ C + G Q+H L +K GL +YV NALI+MY R EA VF
Sbjct: 163 ALSSVLTLC----RYEPGKQVHGLALKLGLYCSIYVANALISMYGRCHDGTAAYEAWTVF 218
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ M K+ V+WN++++ + Q + G +AI + M G+ D + + + +L
Sbjct: 219 EAMEFKNLVTWNSMIAAF-QCCNLGKQAIGVFMRMHSDGVGFDRATVLNICTTLYKSSDL 277
Query: 176 ELGK------QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG---DANKVFRRM-HDRNV 225
+ + Q+H +++K G T V L+ YS E+ G D K+F M H R++
Sbjct: 278 DPDQVSKCCLQLHSLTVKSGLVTQTEVATALVKVYS--EILGEFTDCYKLFMEMSHCRDI 335
Query: 226 ISWTTMIS----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
++WT +I+ + E A+ LF ++R + + P+ TF ++ A + + IH
Sbjct: 336 VAWTGIITAFAVYDPERAILLFGQLRHEKLSPDWYTFSSVLKACAGLVTARHALSIHAQV 395
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IK F ++ V N LI YA+ S+ ++VFD++ R+++SWN+L+ Y+ +G + +
Sbjct: 396 IKGGFATDTVVNNSLIHAYAKCGSLDLCKRVFDDMDSRDVVSWNSLLKAYSLHGQVDSIL 455
Query: 342 QAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALL 399
F + + KP++ TF ++L+A A + K G R + + ++ P + + ++
Sbjct: 456 PVFQKM--DIKPDSATFIALLSACSHAGRV--KEGLRIFRSMFEKP-ETLPQLNHYACVI 510
Query: 400 DMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYE---SVMNQFKEME 450
DM G+ E++ V + + W+ ++ + +HG+ + ++ KE+E
Sbjct: 511 DMLGRAERFAEAEEVIKQMPMGPDAVVWSTLLGSCRKHGNTQLGKLAADKLKEIE 565
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 189/640 (29%), Positives = 336/640 (52%), Gaps = 23/640 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDAVT 59
MY + D A F+ + D+V+W++++ F ++ A L +M V D+VT
Sbjct: 144 MYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVT 203
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ C + G +H +V+ ++S + N+LI MY + G L A R+F+ +P
Sbjct: 204 MLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVP 263
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ + W ++S Y Q G + EA+ +M + + V+ AC ++ G+
Sbjct: 264 CRMTAPWTPMISCYNQSGCFQ-EALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGR 322
Query: 180 QIHGVSIKMGYGTHVS-VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+HG I+ + +G LM Y+ D +KVF + ++ ++SW T+IS+
Sbjct: 323 SVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRN 382
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E+A+ LF +M+ G+ P+ + + A + + G IHG IKT ++ V
Sbjct: 383 GQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND-FVQ 441
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV----QAFFGVIK 349
N LI MYA+ + + K+F+++ + +++WN++I G++QNG S+ A+ Q + +K
Sbjct: 442 NALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVK 501
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
K TF SV+ A L+ G+ H +I GL D + +AL DMY K G +
Sbjct: 502 MDK---LTFLSVIQACSHLG--YLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQ 556
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ VF+ E+S +W+ +I+ HG + ++ F +M G++P+ ITF+ +L+ C
Sbjct: 557 MAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACS 616
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G + +G+ F+SM ++ +EP DH++CMVD+L R G L A +++ +P S+
Sbjct: 617 HAGAVEEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIW 675
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+LL CRIH +++ + I L+ ++ A +G Y L+SN+YAE+G W+ +R MKSK
Sbjct: 676 GALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSK 735
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
G+RK G+S ++ ++ F GD +H ++++IYR E
Sbjct: 736 GLRKVPGYSTIEID--KKIYRFGPGDTSHSQTKDIYRFLE 773
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/531 (27%), Positives = 259/531 (48%), Gaps = 36/531 (6%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRM------NLIGVV 54
Y + G F+ + +F+ PD W ++ + ++A+S M + V
Sbjct: 43 YAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFV 102
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
F +V L C G ++H ++K G +S+ V +L+ MY L +A +
Sbjct: 103 FPSV-----LKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKA 157
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD MP +D V+W++I+ + Q+G E + +M+ + + D V+ S AC +
Sbjct: 158 FDTMPIRDVVAWSSIVLNFVQNGQ-ASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGS 216
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L LG+ +HG ++ ++ S+ N L+ Y K A ++F + R WT MIS
Sbjct: 217 LRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISC 276
Query: 235 NR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++A+++F +M+ + PN VT +G++ A + VKEGR +HG I+ E
Sbjct: 277 YNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPE 336
Query: 290 PSVCN-CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
L+ +YA +++D KVF+ + + I+SWN LIS + +NG A+ F +
Sbjct: 337 LDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQ 396
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ P++Y+ S L+A G L G + H +IIK G +D V +AL+DMY K G
Sbjct: 397 TQGLMPDSYSLASSLSACGTISFSQL--GAQIHGYIIKTGNFND-FVQNALIDMYAKCGF 453
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ + ++F + +EKS W ++I +++G + F +M V+ D +TFLSV+
Sbjct: 454 VHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQA 513
Query: 468 CGRNGMIHKGRHLFDSML-----KDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
C G + KG+ + ++ KD +++ + + DM + G L+ A
Sbjct: 514 CSHLGYLEKGKWVHHKLIMYGLRKDSYLD------TALTDMYSKCGELQMA 558
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 217/452 (48%), Gaps = 15/452 (3%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLH+ + GL LI Y++ G ++RVFD P DS W ++ Y G
Sbjct: 19 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78
Query: 138 DYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
+ EA+ EM+ + ++ + F S AC +L +G ++HG IK G+ + V
Sbjct: 79 FFE-EAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVV 137
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGV 251
L+ Y + DA K F M R+V++W++++ + + + +F +M + V
Sbjct: 138 ETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAV 197
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ VT + + A S ++ GR +HG ++ S S+ N LI MY + + +E+
Sbjct: 198 EPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAER 257
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAE 369
+F+ + CR W +IS Y Q+G A+ F ++E K PN T VL A A
Sbjct: 258 LFENVPCRMTAPWTPMISCYNQSGCFQEALNV-FAKMQEFKMEPNQVTMVGVLCA--CAR 314
Query: 370 DISLKHGQRCHSHIIKVGLDSD-PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+K G+ H +I+ +D + +G AL+++Y G++ + +VF +EK+ +W
Sbjct: 315 LGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNT 374
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+IS R+G E + F +M+ +G+ PDS + S L+ CG G + ++K
Sbjct: 375 LISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG 434
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ + ++DM + G + A ++ +I
Sbjct: 435 NFNDFVQN--ALIDMYAKCGFVHSANKMFEKI 464
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 181/341 (53%), Gaps = 15/341 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M +Y +G +F + I+SWNT++S F ++ ++AL ++M G++ D+
Sbjct: 345 MELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDS 404
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ +++LS C G Q+H I+K G + +V NALI MY++ G + A ++F++
Sbjct: 405 YSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEK 463
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ K V+WN+++ G++Q+G Y VEAI +M +++D ++F S AC H LE
Sbjct: 464 IKEKSLVTWNSMICGFSQNG-YSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEK 522
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
GK +H I G + L YSKC A+ VF RM +R+++SW+ MI+ M
Sbjct: 523 GKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGM 582
Query: 235 NRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + +SLF +M G+ PND+TF+ ++ A S V+EG++ + F EP
Sbjct: 583 HGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFN--SMSEFGVEPKH 640
Query: 293 CN--CLITMYARFESMQDSEKVFDELSCREIIS-WNALISG 330
+ C++ + +R + + ++ L S W AL++G
Sbjct: 641 DHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNG 681
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 5/247 (2%)
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
+H T P LI YA+ + S++VFD + W LI Y G
Sbjct: 20 LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGF 79
Query: 337 SLAAVQAFFGVI--KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
AV + ++ +++ + + F SVL A D+S+ G + H +IK G +SD +V
Sbjct: 80 FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSV--GGKVHGRVIKCGFESDAVV 137
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
++LL MYG+ + ++ + F+ + AW++I+ ++G ++ F +M ++ V
Sbjct: 138 ETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAV 197
Query: 455 RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
PDS+T LSV C G + GR + +++ IE + + ++ M G++G L AE
Sbjct: 198 EPDSVTMLSVTEACSELGSLRLGRSVHGYVVRR-EIESNASLNNSLIVMYGKLGDLYSAE 256
Query: 515 ELVGQIP 521
L +P
Sbjct: 257 RLFENVP 263
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 202/650 (31%), Positives = 349/650 (53%), Gaps = 49/650 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++ Y + GQ + AL +FN + V++N ++SG+ ++ + + VF+ +
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNN-------KFDCARKVFEKMPD 119
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGL--DSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+S+ + G++ L + F + +V NA+++ +++ G + EAR++FD+M
Sbjct: 120 RDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM 179
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K+ +SWN +LS Y Q+G +E L + + + VS+ +K L+
Sbjct: 180 LVKNEISWNGLLSAYVQNGR--IEDARRLFD---SKMDWEIVSWNCLMGGYVRKKRLDDA 234
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MN 235
+ + +M +S N++++ Y++ + +A ++F + R+V +WT M+S N
Sbjct: 235 RSLFD---RMPVRDKIS-WNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQN 290
Query: 236 --REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
++A +F+EM N+V++ +I +++ R + N S
Sbjct: 291 GMLDEATRIFEEMPE----KNEVSWNAMIAGYVQSQQIEKARELFDQMPSRN----TSSW 342
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N ++T YA+ ++ ++ +FDE+ R+ ISW A+ISGYAQ+G S A+ F + ++
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRD--- 399
Query: 354 NAYTFGSVLNAVG-------AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
G +LN AE +L+ G++ H ++K G + I G+ALL MYGK G
Sbjct: 400 -----GGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCG 454
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
SI E+ VF + EK +W +I+ ARHG + + F+ M+ ++PD +T + VL+
Sbjct: 455 SIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLS 513
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G++ KG F+SM ++Y I + HY+CM+D+LGR GRL+EA L+ +P P
Sbjct: 514 ACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDA 573
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
+ +LLGA RIHG+ E+GE+ A+ + +MEP SG YVL+SNLYA G W V +R M
Sbjct: 574 ATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKM 633
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ KGV+K G+SW ++ + H F+ GD +HP +E IY E L E+K
Sbjct: 634 RDKGVKKVPGYSWVEIQ--NKTHIFTVGDCSHPEAERIYAYLEELDLELK 681
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 204/460 (44%), Gaps = 78/460 (16%)
Query: 105 WGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS 164
W + +E++ + + D V WN +S Y + G E+ L++ MR R V++ +
Sbjct: 42 WTQKLESKNSDSTIVDSDIVKWNRKISAYMRKGQ--CESALSVFNGMR---RRSTVTYNA 96
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
S + +++ KM +S NV++S Y K A +F +M +++
Sbjct: 97 MISGYLSNNKFDCARKVFE---KMPDRDLIS-WNVMLSGYVKNGNLSAARALFNQMPEKD 152
Query: 225 VISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
V+SW M+S E+A +F +M + N++++ GL+ A +++ R +
Sbjct: 153 VVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFD 208
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
+ +S NCL+ Y R + + D+ +FD + R+ ISWN +I+GYAQNGL
Sbjct: 209 SKMDWEIVS----WNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSE 264
Query: 340 AVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
A + F E++ ++ D +A++
Sbjct: 265 ARRLF------------------------EELPIR----------------DVFAWTAMV 284
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
+ + G + E+ R+F E EK+E +W A+I+ + E F +M ++ ++
Sbjct: 285 SGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR----NTS 340
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD--HYSCMVDMLGRVGRLEEAEELV 517
++ +++T + G I + + LFD M P D ++ M+ + G+ EEA L
Sbjct: 341 SWNTMVTGYAQCGNIDQAKILFDEM-------PQRDCISWAAMISGYAQSGQSEEALHLF 393
Query: 518 GQIPGGPGL---SVLQSLLGACRIHGNVEMGERIADALMK 554
++ G+ S L L +C +E+G+++ L+K
Sbjct: 394 IKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVK 433
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 206/638 (32%), Positives = 338/638 (52%), Gaps = 20/638 (3%)
Query: 13 ALCIFNNLNNP--DIVSWNTVLSGF--EKSDDALS-FALRMNLIGVVFDAVTYSTALSFC 67
A +F+++ D+ SWN++L+ + DALS F ++ V+ +++ A +
Sbjct: 68 AFAVFDDIPPAARDVTSWNSLLNPLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAA 127
Query: 68 LDHEGFLFGLQLHSLIVKF-GLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSW 126
G H+L K S VYV +L+ MY + G + +ARRVFD MP ++S SW
Sbjct: 128 ARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSW 187
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA--SACGHEKNLELGKQIHGV 184
+ +++GY + E L +M + + F + A SA L +G+Q+HG+
Sbjct: 188 STMVAGYA--AEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGL 245
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----A 239
+K G VSV N L++ Y+K G A VF +RN I+W+ MI+ ++ A
Sbjct: 246 IVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSA 305
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
VS+F +M G P + TF+G+++A S + G+ HGL +K F + V + L+ M
Sbjct: 306 VSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDM 365
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTF 358
YA+ + D+++ FD+L +I+ W A++SG+ QNG A+ + + KE P+ T
Sbjct: 366 YAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTI 425
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
S L A +L+ G++ H+ I+K GL VGSAL MY K G++ + VF
Sbjct: 426 ASGLRACAGIA--ALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRI 483
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
++ AW +IIS +++G ++ F+EM+ +G PD+ITF+++L C G++ +G
Sbjct: 484 PDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGW 543
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRI 538
F M KDY + P DHY+CMVD+L R G L+EA++ + I G + + +LGACR
Sbjct: 544 EYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRS 603
Query: 539 HGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
+ ++G + LM++ S +Y+L+SN+YA + W V +R M+ +GV K+ G S
Sbjct: 604 LRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCS 663
Query: 599 WADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
W ++ +H F G+ HP +E I L MK
Sbjct: 664 WVELN--SRVHVFVVGEQQHPEAENINAQLRRLAKHMK 699
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 232/462 (50%), Gaps = 24/462 (5%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGR--LVEARRVFDEMPN--KDSVSWNAILS 131
G LH+ +K G S V N+LI YS R L A VFD++P +D SWN++L+
Sbjct: 31 GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLLN 90
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHV-SFTSAASACGHEKNLELGKQIHGVSIKMGY 190
+ G ++A+ M+ L SF +A +A + G H ++ K+
Sbjct: 91 PLS--GHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPS 148
Query: 191 G-THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFK 244
++V V L++ Y K + DA +VF M RN SW+TM++ E+A LF+
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR 208
Query: 245 EMRLDGVCPNDVT-FI--GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
M + CP++ + F+ ++ A+S+ + G +HGL +K L SV N L+TMYA
Sbjct: 209 LMLEE--CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYA 266
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
+ M + VF+ R I+W+A+I+GYAQNG + +AV F + P +TF
Sbjct: 267 KAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVG 326
Query: 361 VLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
VLN A+ D+ +L G++ H ++K+G + V SAL+DMY K G I +++ F++
Sbjct: 327 VLN---ASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLY 383
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
E WTA++S ++G++E + + M+ +G+ P T S L C + G+
Sbjct: 384 EVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQ 443
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
L ++K Y + S + M + G LE+ + +IP
Sbjct: 444 LHTQIVK-YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP 484
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 199/377 (52%), Gaps = 17/377 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF--EKSDDALSFALRMNLIGVV---- 54
+NMYCK G A +F+ + + SW+T+++G+ EK + R+ L
Sbjct: 160 LNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKS 219
Query: 55 -FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
F A +A+S L G L G Q+H LIVK GL V V N+L+TMY++ G + A
Sbjct: 220 EFVATAVLSAVSVPL---GLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFH 276
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VF+ ++S++W+A+++GY Q+G+ A+ +M G +F +A
Sbjct: 277 VFESSRERNSITWSAMITGYAQNGE-ADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLG 335
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L +GKQ HG+ +K+G+ + V + L+ Y+KC DA + F ++++ +++ WT M+S
Sbjct: 336 ALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVS 395
Query: 234 MN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ E+A++L+ M +G+ P+ T + A + ++ G+ +H +K
Sbjct: 396 GHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGL 455
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
V + L TMY++ +++D VF + R++I+WN++ISG++QNG A+ F +
Sbjct: 456 GAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMK 515
Query: 349 KESK-PNAYTFGSVLNA 364
E P+ TF ++L A
Sbjct: 516 MEGTIPDNITFINILCA 532
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
MY K G + + +F + + D+++WN+++SGF ++ + AL M + G + D +
Sbjct: 465 TMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNI 524
Query: 59 TYSTALSFCLDHEGFL-FGLQLHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ L C H G + G + SL+ K +GL + ++ + SR G L EA+ +
Sbjct: 525 TFINILCAC-SHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIE 583
Query: 117 EMP-NKDSVSWNAILSG--YTQDGDYGVEAILALIEM 150
+ + + W +L +D D G A L+E+
Sbjct: 584 SITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMEL 620
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 211/681 (30%), Positives = 328/681 (48%), Gaps = 78/681 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS---GFEKSDDALSFALRMNLIGVVFDA 57
MN Y + +KA +F+ + NP+ + WN + EK + +M + +
Sbjct: 175 MNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAET 234
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T L C Q+H + +FGLDS+V + N LI+MYS+ G+L ARRVFD
Sbjct: 235 ATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDS 294
Query: 118 MPNKDSVSWNAILSGYTQDG----------------------------------DYGVEA 143
M N+++ SWN+++S Y G Y E
Sbjct: 295 MENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEV 354
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
+ L M +G + + S TS A L +GK+ HG ++ G+ V VG L+
Sbjct: 355 LNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDM 414
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTF 258
Y K A VF M +RN+ +W +++S EDA+ L +M +G+ P+ VT+
Sbjct: 415 YVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTW 474
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC 318
G+I ++ KE + + + +S+ + V
Sbjct: 475 NGMISGYAMWGCGKEA----------------------LAVLHQTKSLGLTPNV------ 506
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQ 377
+SW ALISG +Q G + +++ F + +E PN+ + +L A + L+ G+
Sbjct: 507 ---VSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLS--LLQKGK 561
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
H I+ G D V +AL+DMY K S+ + +VF Q K+ +W +I A G
Sbjct: 562 EIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFG 621
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
+ ++ F EM+ GV PD+ITF ++L+ C +G+I +G FDSM+ DY I P +HY
Sbjct: 622 LGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHY 681
Query: 498 SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
CMVD+LGR G L+EA +L+ +P P ++ +LLG+CRIH N++ E A L K+EP
Sbjct: 682 CCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEP 741
Query: 558 AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNT 617
S +Y+LM NLY+ WE + LR+ M + GVR +SW + +H FSS +
Sbjct: 742 NNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQIN--QRVHVFSSDEKP 799
Query: 618 HPRSEEIYRMAECLGSEMKYL 638
HP + +IY L SEMK L
Sbjct: 800 HPDAGKIYFELYQLVSEMKKL 820
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 146/570 (25%), Positives = 249/570 (43%), Gaps = 96/570 (16%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFDAVT 59
Y G F A +F + + WN+ + F+ S +L L ++ GVVFD+
Sbjct: 76 YLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEV 135
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR-WGRLVEARRVFDEM 118
YS AL C G+++H ++K G D +VY+ AL+ Y R WG L +A +VF EM
Sbjct: 136 YSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWG-LEKANQVFHEM 194
Query: 119 PNKDSVSWNA--ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
PN +++ WN IL+ ++ GVE +M L+ + + ACG L
Sbjct: 195 PNPEALLWNEAIILNLQSEKLQKGVELFR---KMQFSFLKAETATIVRVLQACGKMGALN 251
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
KQIHG + G + VS+ N L+S YSK A +VF M +RN SW +MIS
Sbjct: 252 AAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYA 311
Query: 234 ----MN---------------------------------REDAVSLFKEMRLDGVCPNDV 256
+N +E+ +++ + M+ +G PN
Sbjct: 312 ALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSS 371
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
+ ++ AIS + G+ HG ++ F + V LI MY + S+ ++ VFD +
Sbjct: 372 SMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNM 431
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHG 376
R I +WN+L+SGY+ G+ F L + E
Sbjct: 432 KNRNIFAWNSLVSGYSFKGM---------------------FEDALRLLNQME------- 463
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE----KSEFAWTAIISA 432
K G+ D + + ++ Y G E+ V ++T+ + +WTA+IS
Sbjct: 464 --------KEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISG 515
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
++ G+ + F +M+ +GV P+S + +L C ++ KG+ + +++ IE
Sbjct: 516 SSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIE- 574
Query: 493 SPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
D + + ++DM + L+ A ++ +I
Sbjct: 575 --DVFVATALIDMYSKSSSLKNAHKVFRRI 602
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 188/567 (33%), Positives = 306/567 (53%), Gaps = 25/567 (4%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G QLH ++K G S+ +GN LI MY++ G L A VF MP ++ VSW A++ G+ +
Sbjct: 23 GAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLR 82
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAAS--ACGHEKNLELGKQIHGVSIKMGYGTH 193
GD L L+ MR + FT +AS ACG ++ G IHG ++ G+ H
Sbjct: 83 HGD--ARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGH 140
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRL 248
V N L+ YSK GDA +VF RN+++W MIS + D++ +F+EM+
Sbjct: 141 HVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQ 200
Query: 249 -----DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI--KTNFLSEPSVCNCLITMYA 301
+ P++ TF L+ A +EG +H + + S + L+ MY
Sbjct: 201 RRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYV 260
Query: 302 RFESMQD-SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTF 358
+ + + +VF+ L + I W +I G+AQ G A++ FG S + + +
Sbjct: 261 KCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAME-LFGRFWSSGVRADGHVL 319
Query: 359 GSVLNAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
SV VG D +L + G++ H + +K D V ++L+DMY K G E+ R F E
Sbjct: 320 SSV---VGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFRE 376
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
++ +WTA+I+ L +HG + ++ F+EM +GV PD + +L++L+ C +G++ +
Sbjct: 377 VPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEEC 436
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
R F ++ D + P +HY+CMVD+LGR G L EA++LV +P P + V Q+LL ACR
Sbjct: 437 RRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACR 496
Query: 538 IHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGF 597
+H NV +G + L+ ++ +YV++SN++AE GDW +R M+ +G+RK+ G
Sbjct: 497 VHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGC 556
Query: 598 SWADVGDIDGLHGFSSGDNTHPRSEEI 624
SW +VG + + GD++HPR+ +I
Sbjct: 557 SWVEVGK-EAHFFYGGGDDSHPRAADI 582
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 219/464 (47%), Gaps = 39/464 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-----LSFALRMNLIGVVF 55
++MY K G+ A +F + ++VSW ++ GF + DA L A+R +L V
Sbjct: 46 IDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMR-SLSDVAP 104
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T S +L C G+ +H V+ G + V N+L+ +YS+ GR+ +ARRVF
Sbjct: 105 NEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVF 164
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-----RLDHVSFTSAASACG 170
D ++ V+WNA++SGY G +G +++L EM ++ + D +F S ACG
Sbjct: 165 DGTVFRNLVTWNAMISGYAHAG-HGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACG 223
Query: 171 HEKNLELGKQIHGVSIKMGYGT--HVSVGNVLMSTYSKCE-VTGDANKVFRRMHDRNVIS 227
G Q+H + G T + + L+ Y KC + A +VF R+ +N I
Sbjct: 224 SLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQ 283
Query: 228 WTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
WTT+I + + +A+ LF GV + ++ + LV++GR +H +
Sbjct: 284 WTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTV 343
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
KT + SV N LI MY + ++ + F E+ R ++SW A+I+G ++G A+
Sbjct: 344 KTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIH 403
Query: 343 AFFGVIKES-KPNAYTFGSVLNAV---GAAEDI-----SLKHGQRCHSHIIKVGLDSDPI 393
F + E +P+ + ++L+A G E+ +++H +R L
Sbjct: 404 MFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRR---------LRPRAE 454
Query: 394 VGSALLDMYGKRGSIFESQR-VFNETQEKSEFAWTAIISALARH 436
+ ++D+ G+ G + E++ V + W ++SA H
Sbjct: 455 HYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVH 498
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 118/232 (50%), Gaps = 9/232 (3%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
++ A + + + G +HG +K F S+ + N LI MYA+ ++ + +VF + R
Sbjct: 10 MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERN 69
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGV--IKESKPNAYTFGSVLNAVGAAEDISLKHGQR 378
++SW AL+ G+ ++G + ++ + + + PN +T + L A G D++ G
Sbjct: 70 VVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAA--GVW 127
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H ++ G + +V ++L+ +Y K G I +++RVF+ T ++ W A+IS A G
Sbjct: 128 IHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGH 187
Query: 439 YESVMNQFKEM-----ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
+ F+EM E + +PD TF S+L CG G +G + +M+
Sbjct: 188 GRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMV 239
>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 206/680 (30%), Positives = 348/680 (51%), Gaps = 57/680 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++ Y K G A +F+ L+ P++VS+ ++SGF KSD +A+ M G+ +
Sbjct: 137 ISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNE 196
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L+ C+ + + G Q+H ++VK GL S V++ NAL+ +Y + G L R+F+E
Sbjct: 197 YTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEE 256
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEM-MRKGLRLDHVSFTSAASACGHEKNLE 176
MP +D SWN ++S ++ Y EA M + KGL++DH S ++ +AC
Sbjct: 257 MPERDITSWNTVISSLVKEFKYD-EAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPM 315
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+Q+H +++K+G +H+SV + L+ Y+KC D +F M R+VI+WT MI+
Sbjct: 316 KGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYM 375
Query: 234 -----------------------------MNRED----AVSLFKEMRLDGVCPNDVTFIG 260
++R D A+ LF EM +GV +D T
Sbjct: 376 EFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTS 435
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
+I A + K + I G +K LS + L+ MY R M+D+EK+F + S
Sbjct: 436 IITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLEN 495
Query: 321 IIS--WNALISGYAQNGLSLAAVQAFF-----GVIKESKPNAYTFGSVLNAVGAAEDISL 373
+ ++I GYA+NG A+ F G I + + + S+ ++G E
Sbjct: 496 DYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHE---- 551
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
G + H H +K GL ++ VG+A + MY K ++ ++ RVFN + +W +++
Sbjct: 552 -MGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGH 610
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN--GMIHKGRHLFDSMLKDYHIE 491
H + + +K+ME G++PDSITF +++ ++ R LF SM +++I+
Sbjct: 611 VLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIK 670
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
P+ +HY+ + +LGR G LEEAE+ + +P P + V ++LL +CRI+ N + + A
Sbjct: 671 PTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARN 730
Query: 552 LMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGF 611
++ +EP SY+L SNLY+ G W +R+ M+ KG RK SW + + +H F
Sbjct: 731 ILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSW--IIHENKIHSF 788
Query: 612 SSGDNTHPRSEEIYRMAECL 631
+ D +HP+ ++IY E L
Sbjct: 789 YARDRSHPQGKDIYSGLEIL 808
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 221/450 (49%), Gaps = 48/450 (10%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H+ +K L+ ++++GNALI+ Y + G + +A +VF + + VS+ A++SG+++ D
Sbjct: 119 VHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK-SD 175
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+ EA+ M+ G+ + +F + +AC + +LG Q+HG+ +K+G + V + N
Sbjct: 176 WEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICN 235
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRL-DGVC 252
LM Y KC ++F M +R++ SW T+IS ++A F+ M+L G+
Sbjct: 236 ALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLK 295
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
+ + L+ A + +G+ +H L +K S SV + LI Y + S D +
Sbjct: 296 VDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDL 355
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAED-- 370
F+ + R++I+W +I+ Y + G+ +AV+ F K K N ++ +VL + +D
Sbjct: 356 FETMPIRDVITWTGMITSYMEFGMLDSAVEVFN---KMPKRNCISYNAVLAGLSRNDDGS 412
Query: 371 -------------------------------ISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
S K Q+ ++K G+ S+ + +AL+
Sbjct: 413 RALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALV 472
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFA--WTAIISALARHGDYESVMNQFKEMENKG-VRP 456
DMY + G + +++++F + ++++ T++I AR+G ++ F +++G +
Sbjct: 473 DMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVM 532
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
D + S+L++CG G G + LK
Sbjct: 533 DEVMSTSILSLCGSIGFHEMGMQMHCHALK 562
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 122/233 (52%), Gaps = 11/233 (4%)
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N LI+ Y + ++D++KVF LSC ++S+ ALISG++++ AV+ FF ++ +
Sbjct: 134 NALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIE 193
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN YTF ++L A D L G + H ++K+GL S + +AL+ +Y K G +
Sbjct: 194 PNEYTFVAILTACIRNMDYQL--GSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVL 251
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME-NKGVRPDSITFLSVLTVCGRN 471
R+F E E+ +W +IS+L + Y+ + F+ M+ KG++ D + ++LT C +
Sbjct: 252 RLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGS 311
Query: 472 GMIHKGRHLFDSMLK---DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
KG+ L LK + H+ S S ++ + G + +L +P
Sbjct: 312 VKPMKGQQLHALALKVGLESHLSVS----SSLIGFYTKCGSANDVTDLFETMP 360
>gi|15228117|ref|NP_181268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216848|sp|Q9ZUT5.1|PP191_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37310
gi|4056485|gb|AAC98051.1| hypothetical protein [Arabidopsis thaliana]
gi|110741249|dbj|BAF02175.1| hypothetical protein [Arabidopsis thaliana]
gi|330254288|gb|AEC09382.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 203/645 (31%), Positives = 331/645 (51%), Gaps = 56/645 (8%)
Query: 42 LSFALRMNLIGVV----FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNA 97
L F ++ L G++ D Y + H L LQLH+ IV F + + ++ +
Sbjct: 3 LGFEIQRALQGLLNKAAVDGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASK 62
Query: 98 LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM------ 151
LI+ Y+R R +A VFDE+ +++ S+NA+L YT Y +A + +
Sbjct: 63 LISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMY-FDAFSLFLSWIGSSCYS 121
Query: 152 RKGLRLDHVSFT---SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
R D +S + A S C L +Q+HG I+ G+ + V VGN +++ Y+KC+
Sbjct: 122 SDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCD 181
Query: 209 VTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM-RLDGVCPNDVTFIGLI 262
A KVF M +R+V+SW +MIS + ED ++K M PN VT I +
Sbjct: 182 NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVF 241
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
A + + G +H I+ + + S+CN +I YA+ S+ + +FDE+S ++ +
Sbjct: 242 QACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV 301
Query: 323 S-------------------------------WNALISGYAQNGLSLAAVQAFFGVIK-E 350
+ WNA+ISG QN + +F +I+
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
S+PN T S+L ++ + + LK G+ H+ I+ G D++ V ++++D Y K G +
Sbjct: 362 SRPNTVTLSSLLPSLTYSSN--LKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLG 419
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+QRVF+ +++S AWTAII+A A HGD +S + F +M+ G +PD +T +VL+
Sbjct: 420 AQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAH 479
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G +H+FDSML Y IEP +HY+CMV +L R G+L +A E + ++P P V
Sbjct: 480 SGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWG 539
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL + G++E+ D L +MEP +G+Y +M+NLY + G WE ++R MK G
Sbjct: 540 ALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIG 599
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
++K G SW + GL F + D++ RS+E+Y + E L M
Sbjct: 600 LKKIPGTSWIETE--KGLRSFIAKDSSCERSKEMYEIIEGLVESM 642
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 200/437 (45%), Gaps = 51/437 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVFD 56
+ Y K + A +F+ ++ D+VSWN+++SG+ +S D + + +
Sbjct: 174 ITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPN 233
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT + C +FGL++H +++ + ++ + NA+I Y++ G L AR +FD
Sbjct: 234 GVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFD 293
Query: 117 EMPNKDSVSWNAILSGYTQDG------------------------------DYGVEAILA 146
EM KDSV++ AI+SGY G ++ E I +
Sbjct: 294 EMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINS 353
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
EM+R G R + V+ +S + + NL+ GK+IH +I+ G ++ V ++ Y+K
Sbjct: 354 FREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAK 413
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGL 261
A +VF DR++I+WT +I+ + + A SLF +M+ G P+DVT +
Sbjct: 414 LGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN--CLITMYARFESMQDSEKVFDELSCR 319
+ A + + I + T + EP V + C++++ +R + D+ + ++
Sbjct: 474 LSAFAHSGDSDMAQHIFD-SMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPID 532
Query: 320 EIIS-WNALISGYAQNG-LSLA--AVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKH 375
I W AL++G + G L +A A F + E+ N ++ G E+
Sbjct: 533 PIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEE----- 587
Query: 376 GQRCHSHIIKVGLDSDP 392
+ + + ++GL P
Sbjct: 588 AEMVRNKMKRIGLKKIP 604
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 191/602 (31%), Positives = 322/602 (53%), Gaps = 33/602 (5%)
Query: 24 DIVSWNTVLSGFEKSDDALS---FALRMNLI------GVVFDAVTYSTALSFCLDHEGFL 74
+ VSWN+++ F SD+ S F L ++ + D T T L C
Sbjct: 2 NFVSWNSMIRVF--SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 59
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
G +H VK LD E+ + NAL+ MYS+ G + A+ +F NK+ VSWN ++ G++
Sbjct: 60 LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 119
Query: 135 QDGD-YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
+GD +G +L + + ++ D V+ +A C HE L K++H S+K + +
Sbjct: 120 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 179
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMNREDAVSL--FKEMRL 248
V N +++Y+KC A +VF + + V SW +I + + + +SL +M++
Sbjct: 180 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 239
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
G+ P+ T L+ A S ++ G+ +HG I+ + V ++++Y +
Sbjct: 240 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 299
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFG------SVL 362
+ +FD + + ++SWN +I+GY QNG A+ F ++ +G S++
Sbjct: 300 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV--------LYGIQLCGISMM 351
Query: 363 NAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
GA + SL+ G+ H++ +K L+ D + +L+DMY K GSI +S +VFN +EK
Sbjct: 352 PVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEK 411
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
S +W A+I HG + + F+EM+ G PD +TFL VLT C +G+IH+G
Sbjct: 412 STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYL 471
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG-QIPGGPGLSVLQSLLGACRIHG 540
D M + ++P+ HY+C++DMLGR G+L++A +V ++ + + +SLL +CRIH
Sbjct: 472 DQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQ 531
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
N+EMGE++A L ++EP +YVL+SNLYA G WE V +R+ M +RK+ G SW
Sbjct: 532 NLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 591
Query: 601 DV 602
++
Sbjct: 592 EL 593
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 145/484 (29%), Positives = 236/484 (48%), Gaps = 26/484 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSF--ALRMNLIG---VVF 55
M+MY K G A IF NN ++VSWNT++ GF D LR L G V
Sbjct: 84 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 143
Query: 56 DAVTYSTALSFCLDHEGFLFGL-QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D VT A+ C HE FL L +LH +K V NA + Y++ G L A+RV
Sbjct: 144 DEVTILNAVPVCF-HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 202
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F + +K SWNA++ G+ Q D + ++ A ++M GL D + S SAC K+
Sbjct: 203 FHGIRSKTVNSWNALIGGHAQSNDPRL-SLDAHLQMKISGLLPDSFTVCSLLSACSKLKS 261
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L LGK++HG I+ + V ++S Y C +F M D++++SW T+I+
Sbjct: 262 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITG 321
Query: 235 NRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++ A+ +F++M L G+ ++ + + A S+ ++ GR H +K +
Sbjct: 322 YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDD 381
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ LI MYA+ S+ S KVF+ L + SWNA+I GY +GL+ A++ F + +
Sbjct: 382 AFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQR 441
Query: 350 ES-KPNAYTFGSVLNAVGAAEDI--SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
P+ TF VL A + I L++ + S GL + + ++DM G+ G
Sbjct: 442 TGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSF---GLKPNLKHYACVIDMLGRAG 498
Query: 407 SIFESQRVFNE--TQEKSEFAWTAIISALARHGDY---ESVMNQFKEMENKGVRPDSITF 461
+ ++ RV E ++E W +++S+ H + E V + E+E + +P++
Sbjct: 499 QLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE--KPENYVL 556
Query: 462 LSVL 465
LS L
Sbjct: 557 LSNL 560
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVIKES-----KPNAYTFGSVLNAVGAAEDISL 373
R +SWN++I ++ NG S + +++E+ P+ T +VL +I L
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
G+ H +K+ LD + ++ +AL+DMY K G I +Q +F K+ +W ++
Sbjct: 61 --GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 118
Query: 434 ARHGDYESVMNQFKEMENKG--VRPDSITFLSVLTVC 468
+ GD + ++M G V+ D +T L+ + VC
Sbjct: 119 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 155
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 204/648 (31%), Positives = 345/648 (53%), Gaps = 48/648 (7%)
Query: 19 NLNNPDIVSWNTVLS--GFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFG 76
++++ D WN++++ + AL+F RM V + T+ L C L
Sbjct: 12 SISHKDTFHWNSLIAKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP--NKDSVSWNAILSGYT 134
LQ+H+ + + GL ++ + AL+ Y + G A +VFDEMP + D VSW A++S Y+
Sbjct: 72 LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131
Query: 135 QDGDYGVEAILALIEM--MR-----KGLRLDHVSFTSAASAC--GHEKN-LELGKQIHGV 184
+G EA A M MR + +D VS + SAC G N L G +HG+
Sbjct: 132 SNGCVD-EAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGL 190
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR--RMHDRNVISWTTMIS---MN--RE 237
+K G+G +GN ++ YS C+ G A +VF + R+V+SW ++IS +N E
Sbjct: 191 VVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAE 250
Query: 238 DAVSLFKEMRLDG---VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN----FLSEP 290
A+ F++M +G V PN VT I L+ + + V+ +H + +
Sbjct: 251 RALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDV 310
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V L+ M+AR ++ + ++FD + + ++ W+A+I+GY Q A++ F ++ E
Sbjct: 311 VVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLME 370
Query: 351 S-------KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
KPNA T SV+ A +GA+ S+ H + + GLD D + SAL+D
Sbjct: 371 GNMVGVEVKPNAVTLVSVIAACSRLGASRSASM-----IHKYAVATGLDQDARIASALID 425
Query: 401 MYGKRGSIFESQRVFNETQE--KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
M K G I ++VF+E E ++ +W+++I A HG+ + + F EM G P+
Sbjct: 426 MCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNE 485
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
IT++SVL+ C G++ +G+ F+SM KDY + P+ HY+C+VD+LGR G L+EA ++
Sbjct: 486 ITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVIL 545
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEM 578
+P L++ SLL AC +HGN ++GE + ++ ++ G +VL++N+Y + G W+
Sbjct: 546 NMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDD 605
Query: 579 VAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
V +R ++ G+RK G S+ ++G + ++ F + D +HP SE IY+
Sbjct: 606 VVRMRVELRRSGLRKIPGQSFIEIG--NEVYSFMAEDRSHPESEMIYK 651
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRM----NLIGV 53
++M+ + G A IF+ + ++V W+ +++G+E+ ++AL +M N++GV
Sbjct: 317 LDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGV 376
Query: 54 VF--DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
+AVT + ++ C +H V GLD + + +ALI M ++ G +
Sbjct: 377 EVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHG 436
Query: 112 RRVFDEM--PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
R+VF EM + VSW++++ G+ G A+ EM G + +++ S SAC
Sbjct: 437 RQVFSEMDESTRTVVSWSSMIGAEGIHGE-GKRALELFSEMRTGGYEPNEITYISVLSAC 495
Query: 170 GHEKNLELGKQIHGVSIKMGYG 191
H +E GK S++ YG
Sbjct: 496 SHAGLVEQGKSCFN-SMEKDYG 516
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/557 (33%), Positives = 301/557 (54%), Gaps = 15/557 (2%)
Query: 101 MYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
MYS+ AR V P ++ VSW +++SG Q+G + A++ EM R+G+ +
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFST-ALVEFFEMRREGVVPNDF 59
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+F A A + GKQIH +++K G V VG Y K + DA K+F +
Sbjct: 60 TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119
Query: 221 HDRNVISWTTMISMNRED-----AVSLFKEMR-LDGVCPNDVTFIGLIHAISIGNLVKEG 274
+RN+ +W IS + D A+ F E R +DG PN +TF ++A S + G
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH-PNSITFCAFLNACSDWLHLNLG 178
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
+HGL +++ F ++ SVCN LI Y + + ++ SE +F E+ + +SW +L++ Y QN
Sbjct: 179 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 238
Query: 335 GLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
A + K+ + + + SVL+A + L G+ H+H +K ++
Sbjct: 239 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLEL--GRSIHAHAVKACVERTIF 296
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
VGSAL+DMYGK G I +S++ F+E EK+ ++I A G + + F+EM +G
Sbjct: 297 VGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG 356
Query: 454 V--RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
P+ +TF+S+L+ C R G + G +FDSM Y IEP +HYSC+VDMLGR G +E
Sbjct: 357 CGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVE 416
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
A E + ++P P +SV +L ACR+HG ++G A+ L K++P SG++VL+SN +A
Sbjct: 417 RAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFA 476
Query: 572 EKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
G W +R+ +K G++K G+SW V + +H F + D +H ++EI L
Sbjct: 477 AAGRWAEANTVREELKGVGIKKGAGYSWITVK--NQVHAFQAKDRSHILNKEIQTTLAKL 534
Query: 632 GSEMKYLNSKRERAIAL 648
+EM+ K + ++L
Sbjct: 535 RNEMEAAGYKPDLKLSL 551
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 216/448 (48%), Gaps = 16/448 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
MY K + A + ++VSW +++SG ++ AL M GVV + T
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ A + G Q+H+L VK G +V+VG + MY + +AR++FDE+P
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ +WNA +S DG EAI A IE R + ++F + +AC +L LG
Sbjct: 121 ERNLETWNAFISNSVTDG-RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNR 236
Q+HG+ ++ G+ T VSV N L+ Y KC+ + +F M +N +SW ++++ N
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239
Query: 237 ED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
ED A L+ R D V +D ++ A + ++ GR IH +K V +
Sbjct: 240 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG---LSLAAVQAFFGVIKES 351
L+ MY + ++DSE+ FDE+ + +++ N+LI GYA G ++LA +
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFE 410
PN TF S+L+A A ++++G + + G++ S ++DM G+ G +
Sbjct: 360 TPNYMTFVSLLSACSRAG--AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVER 417
Query: 411 SQRVFNETQEKSEFA-WTAIISALARHG 437
+ + + + W A+ +A HG
Sbjct: 418 AYEFIKKMPIQPTISVWGALQNACRMHG 445
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 182/382 (47%), Gaps = 18/382 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+MYCK+ D A +F+ + ++ +WN +S + +A+ + I ++
Sbjct: 100 FDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNS 159
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ L+ C D G+QLH L+++ G D++V V N LI Y + ++ + +F E
Sbjct: 160 ITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTE 219
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K++VSW ++++ Y Q+ + ++L L + + +S SAC LEL
Sbjct: 220 MGTKNAVSWCSLVAAYVQNHEDEKASVLYL-RSRKDIVETSDFMISSVLSACAGMAGLEL 278
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+ IH ++K + VG+ L+ Y KC D+ + F M ++N+++ ++I
Sbjct: 279 GRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAH 338
Query: 233 SMNREDAVSLFKEM--RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A++LF+EM R G PN +TF+ L+ A S V+ G I +++ + EP
Sbjct: 339 QGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEP 397
Query: 291 SV--CNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNG---LSLAAVQAF 344
+C++ M R ++ + + ++ + IS W AL + +G L L A +
Sbjct: 398 GAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENL 457
Query: 345 FGVIKESKPNAYTFGSVLNAVG 366
F + + N + A G
Sbjct: 458 FKLDPKDSGNHVLLSNTFAAAG 479
>gi|302820510|ref|XP_002991922.1| hypothetical protein SELMODRAFT_134446 [Selaginella moellendorffii]
gi|300140308|gb|EFJ07033.1| hypothetical protein SELMODRAFT_134446 [Selaginella moellendorffii]
Length = 690
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 200/616 (32%), Positives = 339/616 (55%), Gaps = 56/616 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY K G A F+ ++ ++ SW +L F A+ M L GV D
Sbjct: 78 VRMYGKCGSIADAKEAFDQIHRKNVFSWTIMLGAFADCGHHRQAIQIYHAMVLEGVRPDC 137
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V +++ C + + F G +H +++ G +S+V V N L+TMYS+ GR+ AR VF
Sbjct: 138 VAFASIAGICSELQCFQAGKAIHDCVLEQGAESDVIVANNLVTMYSKCGRIDGARCVFRR 197
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ NK+ +SWNA+++ + Q GD+ + +E+ + D ++ AA AC +L+
Sbjct: 198 IKNKNPISWNAMIAAFAQCGDFA-----SALELYVEHPVPDKITLILAAKACASLGDLDR 252
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH--DRNVISWTTMISMN 235
G++IH ++++G + + V N L+ Y KC GDA ++F + +R+VISW ++I+
Sbjct: 253 GREIHARAVELGLESDLLVANSLIGMYGKCYCVGDAKRLFDGLEAKNRDVISWNSIIAAY 312
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
A+ LF+E R+D V PN +TFI LI A S +++GR IH + F E
Sbjct: 313 ILAGMSSQALELFRE-RMD-VEPNRITFIALIDACSTLCDLEQGRWIHERIRSSEFAREV 370
Query: 291 SVCNCLITMYAR----------FESMQ--------------------DSEKVFDELSCRE 320
+V N L+ MYA+ FESM+ D+ VF + R+
Sbjct: 371 AVENGLLLMYAKCGSIEEAMAIFESMEGRRTLATSLVIMYCKFGCVADAMAVFSGMRSRD 430
Query: 321 IISWNALISGYAQNG-LSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQR 378
+++W A+I+ ++Q S+ AV F + + SKP+ TF SVL ++ A L G+
Sbjct: 431 VVAWTAMITAFSQQEHTSMEAVDYFCQMDLDGSKPDEVTFASVLGSI--ARLGLLSRGRS 488
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET-QEKSEFAWTAIISALARHG 437
H ++ G SD +VG+ALLDMY K GS+ +++R F++ ++ +W A+I+A+A+HG
Sbjct: 489 VHCDVLACGFQSDVVVGTALLDMYSKCGSLIDAKRAFDDLGGSRNLVSWNAMIAAMAKHG 548
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD---SMLKDYHIEPSP 494
D+ S ++ M +GVRP+ +TF ++L +C G + ++D S++ ++ ++ +P
Sbjct: 549 DWSSGFELYRAMILEGVRPNDVTFTNMLFLCSHGGGGDRECGIWDACASIVLEFGVKITP 608
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPG-GPGLSVLQSLLGACRIHGNVEMGERIADALM 553
DH+ +VD+LGR GRLEEAEE V + G PG+ ++LLG+C + ++E G R+A +M
Sbjct: 609 DHHCSIVDVLGRSGRLEEAEEFVDKGMGFEPGIVEYRTLLGSCTVACDMERGARVAQRVM 668
Query: 554 KMEPAGSGSYVLMSNL 569
++EP S +Y L++ +
Sbjct: 669 EIEPQTSMAYSLLAKI 684
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 154/535 (28%), Positives = 258/535 (48%), Gaps = 45/535 (8%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D Y+T L C + G +H+ I+ G + ++GN L+ MY + G + +A+ F
Sbjct: 35 DNDVYATLLRECERSKSLSQGRYIHAHILASGKSGKTFLGNLLVRMYGKCGSIADAKEAF 94
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D++ K+ SW +L + G + +AI M+ +G+R D V+F S A C +
Sbjct: 95 DQIHRKNVFSWTIMLGAFADCGHHR-QAIQIYHAMVLEGVRPDCVAFASIAGICSELQCF 153
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+ GK IH ++ G + V V N L++ YSKC A VFRR+ ++N ISW MI+
Sbjct: 154 QAGKAIHDCVLEQGAESDVIVANNLVTMYSKCGRIDGARCVFRRIKNKNPISWNAMIAAF 213
Query: 236 RE--DAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ D S E+ ++ P+ +T I A S+G+L GR IH ++ S+ V
Sbjct: 214 AQCGDFASAL-ELYVEHPVPDKITLILAAKACASLGDL-DRGREIHARAVELGLESDLLV 271
Query: 293 CNCLITMYARFESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
N LI MY + + D++++FD L R++ISWN++I+ Y G+S A++ F + +
Sbjct: 272 ANSLIGMYGKCYCVGDAKRLFDGLEAKNRDVISWNSIIAAYILAGMSSQALELFRERM-D 330
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS--- 407
+PN TF ++++A D L+ G+ H I + V + LL MY K GS
Sbjct: 331 VEPNRITFIALIDACSTLCD--LEQGRWIHERIRSSEFAREVAVENGLLLMYAKCGSIEE 388
Query: 408 ---IFESQR------------------------VFNETQEKSEFAWTAIISALAR--HGD 438
IFES VF+ + + AWTA+I+A ++ H
Sbjct: 389 AMAIFESMEGRRTLATSLVIMYCKFGCVADAMAVFSGMRSRDVVAWTAMITAFSQQEHTS 448
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS 498
E+V + F +M+ G +PD +TF SVL R G++ +GR + +L + +
Sbjct: 449 MEAV-DYFCQMDLDGSKPDEVTFASVLGSIARLGLLSRGRSVHCDVLA-CGFQSDVVVGT 506
Query: 499 CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALM 553
++DM + G L +A+ + G L +++ A HG+ G + A++
Sbjct: 507 ALLDMYSKCGSLIDAKRAFDDLGGSRNLVSWNAMIAAMAKHGDWSSGFELYRAMI 561
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 192/384 (50%), Gaps = 17/384 (4%)
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
L + K L +D+ + + C K+L G+ IH + G +GN+L+ Y K
Sbjct: 24 LARLGHKDLDVDNDVYATLLRECERSKSLSQGRYIHAHILASGKSGKTFLGNLLVRMYGK 83
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGL 261
C DA + F ++H +NV SWT M+ + A+ ++ M L+GV P+ V F +
Sbjct: 84 CGSIADAKEAFDQIHRKNVFSWTIMLGAFADCGHHRQAIQIYHAMVLEGVRPDCVAFASI 143
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
S + G+ IH ++ S+ V N L+TMY++ + + VF + +
Sbjct: 144 AGICSELQCFQAGKAIHDCVLEQGAESDVIVANNLVTMYSKCGRIDGARCVFRRIKNKNP 203
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
ISWNA+I+ +AQ G +A++ + ++ P+ T +L A A L G+ H+
Sbjct: 204 ISWNAMIAAFAQCGDFASALELY---VEHPVPDKITL--ILAAKACASLGDLDRGREIHA 258
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN--ETQEKSEFAWTAIISALARHGDY 439
+++GL+SD +V ++L+ MYGK + +++R+F+ E + + +W +II+A G
Sbjct: 259 RAVELGLESDLLVANSLIGMYGKCYCVGDAKRLFDGLEAKNRDVISWNSIIAAYILAGMS 318
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML-KDYHIEPSPDHYS 498
+ F+E + V P+ ITF++++ C + +GR + + + ++ E + ++
Sbjct: 319 SQALELFRERMD--VEPNRITFIALIDACSTLCDLEQGRWIHERIRSSEFAREVAVENG- 375
Query: 499 CMVDMLGRVGRLEEAEELVGQIPG 522
++ M + G +EEA + + G
Sbjct: 376 -LLLMYAKCGSIEEAMAIFESMEG 398
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 206/655 (31%), Positives = 328/655 (50%), Gaps = 81/655 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK-----SDDALSFALRMNLIGVVF 55
+N+Y K + +A +F + N D+VSWN +++G+ + S + RM
Sbjct: 47 VNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAP 106
Query: 56 DAVTYS---TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
+A T++ TA S +D G G H++ +K +V+VG++L+ MY + G EAR
Sbjct: 107 NAHTFAGVFTAASTLVDAAG---GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEAR 163
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGH 171
+VFD MP ++SVSW ++SGY EA L L +MR+ + FTS SA
Sbjct: 164 KVFDTMPERNSVSWATMISGYASQ-KLAAEA-LGLFRLMRREEEGENEFVFTSVLSALTL 221
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+ + GKQIH +++K G + VSVGN L++ Y+KC DA + F D+N I+W+ M
Sbjct: 222 PELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAM 281
Query: 232 I-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I S + + A+ LF M L G+ P++ TF+G+I+A S EG+ +H +K F
Sbjct: 282 ITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGF 341
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG-----LSLAAV 341
S+ V L+ MYA+ S+ D+ K FD L +I+ W ++I GY QNG LSL
Sbjct: 342 ESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGR 401
Query: 342 QAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
G++ PN T SVL A + +L+ G++ H+ +K G + +GSAL M
Sbjct: 402 MEMEGIL----PNELTMASVLKACSSLA--ALEQGKQIHARTVKYGFGLEVPIGSALSTM 455
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K G + + VF + +W A+IS L+++G + + F+EM+ +G +PD +TF
Sbjct: 456 YAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTF 515
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+++L+ C G++ +G F M ++ ++P +HY+CMVD+L R G+L+EA E
Sbjct: 516 VNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFT---- 571
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAI 581
+ + G WE V
Sbjct: 572 ---------------------------------------------ESATIDHGMWEDVER 586
Query: 582 LRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+R+ MK +GV KE G SW ++ G+H F D HP+ +I+ L +MK
Sbjct: 587 VRRMMKLRGVSKEPGCSWIELK--SGVHVFVVKDQMHPQIGDIHVELRQLSKQMK 639
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 210/683 (30%), Positives = 346/683 (50%), Gaps = 58/683 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
+ Y + G AL +F+ + + D V++N++++ F + AL M L G +
Sbjct: 101 LTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTS 160
Query: 58 VTYSTALSFCLDH--EGFLFGLQLHSLIVKFG-LD-SEVYVGNALITMYSRWGRLVEARR 113
T + L C H E G + H+ +K G LD E + NAL++MY+R G + +A+
Sbjct: 161 FTLVSVLLAC-SHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQT 219
Query: 114 VF-----DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASA 168
+F ++P V+WN ++S Q G G EAI L +M+ +G+R D V+F SA A
Sbjct: 220 LFGSVGATDVPGGGVVTWNTMVSLLVQSGRCG-EAIEVLYDMVARGVRPDGVTFASALPA 278
Query: 169 CGHEKNLELGKQIHGVSIK-MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH--DRNV 225
C + L LG+++H +K + V + L+ Y+ E G A VF + +R +
Sbjct: 279 CSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQL 338
Query: 226 ISWTTMI-----SMNREDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
W MI + EDA+ LF M + GV P++ T G++ + + +HG
Sbjct: 339 GLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHG 398
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
+K P V N L+ +YAR M + +F + R+++SWN LI+G G
Sbjct: 399 YVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQG---- 454
Query: 340 AVQAFFGVIKESK-----------------------PNAYTFGSVLNAVGAAEDISLKHG 376
++ F +++E + PN T ++L G A + G
Sbjct: 455 HIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLP--GCAMLAAPARG 512
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
+ H + ++ LDSD VGSAL+DMY K G + S+ VF+ ++ W +I A H
Sbjct: 513 KEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMH 572
Query: 437 GDYESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
G + + F M + +P+ +TF++ L C +GM+ +G +F SM +++ +EP+PD
Sbjct: 573 GLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPD 632
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQI-PGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
++C VD+LGR GRL+EA ++ + PG +S S LGACR+H NV +GE A+ L +
Sbjct: 633 LHACAVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFE 692
Query: 555 MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG-LHGFSS 613
+EP + YVL+ N+Y+ G WE + +R M+ +GV KE G SW ++DG +H F +
Sbjct: 693 LEPDEASHYVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWI---ELDGVIHRFMA 749
Query: 614 GDNTHPRSEEIYRMAECLGSEMK 636
G++ HP S ++ + L M+
Sbjct: 750 GESAHPESTLVHAHMDALWERMR 772
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 228/464 (49%), Gaps = 40/464 (8%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
V NAL+T Y+R G L A +FD MP++D+V++N++++ + + A+ AL +M+ +
Sbjct: 96 VSNALLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCLFRRW-LPALDALRDMLLE 154
Query: 154 GLRLDHVSFTSAASACGH-EKNLELGKQIHGVSIKMGY--GTHVSVGNVLMSTYSKCEVT 210
G L + S AC H ++L LG++ H ++K G+ G N L+S Y++ +
Sbjct: 155 GHPLTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLV 214
Query: 211 GDANKVFRRMHDRN-----VISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIG 260
DA +F + + V++W TM+S+ + +A+ + +M GV P+ VTF
Sbjct: 215 DDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFAS 274
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPS-VCNCLITMYARFESMQDSEKVFDELSC- 318
+ A S ++ GR +H +K L+ S V + L+ MYA E + + VFD +
Sbjct: 275 ALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAG 334
Query: 319 -REIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKH 375
R++ WNA+I GYAQ GL A++ F + E+ P+ T VL + +E + K
Sbjct: 335 ERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGK- 393
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
+ H +++K G+ +P V +AL+D+Y + G + ++ +F + + +W +I+
Sbjct: 394 -EAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVV 452
Query: 436 HGDYESVMNQFKEMENKG------------------VRPDSITFLSVLTVCGRNGMIHKG 477
G +EM+ +G V P++IT +++L C +G
Sbjct: 453 QGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARG 512
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ + ++ + ++ S +VDM + G L + + ++P
Sbjct: 513 KEIHGYAVR-HALDSDVAVGSALVDMYAKCGCLALSRAVFDRLP 555
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 13/260 (5%)
Query: 275 RMIHGLCIKTNFL--SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
R IHG ++ + L P+V N L+T YAR + + +FD + R+ +++N+LI+
Sbjct: 77 RSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALC 136
Query: 333 QNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVG-AAEDISLKHGQRCHSHIIKVG-LD 389
L A+ A ++ E P ++T SVL A AED+ L G+ H+ +K G LD
Sbjct: 137 LFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAEDLRL--GREAHAFALKNGFLD 194
Query: 390 SDP-IVGSALLDMYGKRGSIFESQRVF-----NETQEKSEFAWTAIISALARHGDYESVM 443
D +ALL MY + G + ++Q +F + W ++S L + G +
Sbjct: 195 GDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAI 254
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
+M +GVRPD +TF S L C + M+ GR + +LKD + + S +VDM
Sbjct: 255 EVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDM 314
Query: 504 LGRVGRLEEAEELVGQIPGG 523
R+ A + +P G
Sbjct: 315 YASHERVGAARLVFDMVPAG 334
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 204/648 (31%), Positives = 345/648 (53%), Gaps = 48/648 (7%)
Query: 19 NLNNPDIVSWNTVLS--GFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFG 76
++++ D WN++++ + AL+F RM V + T+ L C L
Sbjct: 12 SISHKDTFHWNSLIAKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP--NKDSVSWNAILSGYT 134
LQ+H+ + + GL ++ + AL+ Y + G A +VFDEMP + D VSW A++S Y+
Sbjct: 72 LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131
Query: 135 QDGDYGVEAILALIEM--MR-----KGLRLDHVSFTSAASAC--GHEKN-LELGKQIHGV 184
+G EA A M MR + +D VS + SAC G N L G +HG+
Sbjct: 132 SNGCVD-EAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGL 190
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR--RMHDRNVISWTTMIS---MN--RE 237
+K G+G +GN ++ YS C+ G A +VF + R+V+SW ++IS +N E
Sbjct: 191 VVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAE 250
Query: 238 DAVSLFKEMRLDG---VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN----FLSEP 290
A+ F++M +G V PN VT I L+ + + V+ +H + +
Sbjct: 251 RALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDV 310
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V L+ M+AR ++ + ++FD + + ++ W+A+I+GY Q A++ F ++ E
Sbjct: 311 VVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLME 370
Query: 351 S-------KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
KPNA T SV+ A +GA+ S+ H + + GLD D + SAL+D
Sbjct: 371 GNMVGVEVKPNAVTLVSVIAACSRLGASRSASM-----IHKYAVATGLDQDARIASALID 425
Query: 401 MYGKRGSIFESQRVFNETQE--KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
M K G I ++VF+E E ++ +W+++I A HG+ + + F EM G P+
Sbjct: 426 MCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNE 485
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
IT++SVL+ C G++ +G+ F+SM KDY + P+ HY+C+VD+LGR G L+EA ++
Sbjct: 486 ITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVIL 545
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEM 578
+P L++ SLL AC +HGN ++GE + ++ ++ G +VL++N+Y + G W+
Sbjct: 546 NMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDD 605
Query: 579 VAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
V +R ++ G+RK G S+ ++G + ++ F + D +HP SE IY+
Sbjct: 606 VVRMRVELRRSGLRKIPGQSFIEIG--NEVYSFMAEDRSHPESEMIYK 651
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRM----NLIGV 53
++M+ + G A IF+ + ++V W+ +++G+E+ ++AL +M N++GV
Sbjct: 317 LDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGV 376
Query: 54 VF--DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
+AVT + ++ C +H V GLD + + +ALI M ++ G +
Sbjct: 377 EVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHG 436
Query: 112 RRVFDEM--PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
R+VF EM + VSW++++ G+ G A+ EM G + +++ S SAC
Sbjct: 437 RQVFSEMDESTRTVVSWSSMIGAEGIHGE-GKRALELFSEMRTGGYEPNEITYISVLSAC 495
Query: 170 GHEKNLELGKQIHGVSIKMGYG 191
H +E GK S++ YG
Sbjct: 496 SHAGLVEQGKSCFN-SMEKDYG 516
>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 322/617 (52%), Gaps = 22/617 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVF-D 56
+++Y + A +F + DIVSWN +L G ++ +A M L+G V D
Sbjct: 218 ISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPD 277
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+VT + C + G +H L ++ + + V N+LI MYS+ + A VF
Sbjct: 278 SVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFK 337
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+P +D VSWNA++SGY+Q+G + EA ++++ + + + +C + L+
Sbjct: 338 AIPERDLVSWNAMISGYSQNG-HSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQ 396
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD----RNVISWTTMI 232
G+ IH +K+G+ + N LM Y C GD F + +++ W T++
Sbjct: 397 FGESIHCWQLKLGFANNPLAVNSLMLMYINC---GDLVACFSLLQTVSAAADIVCWNTVM 453
Query: 233 SMNRE-----DAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+ + +A+ F MR D VC + V +I A L+ G +HGL +KT
Sbjct: 454 AGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLM 513
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S+ V N LITMY R ++++ +F R + SWN +IS ++QN A++ F
Sbjct: 514 ESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCH 573
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ E +PN T +L+A + L+HG++ H H+I+ L + V +AL DMY G
Sbjct: 574 I--EFEPNEITIVGILSA--CTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCG 629
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ + ++F + E+S AW ++ISA H + + F EM G RP TF+S+L+
Sbjct: 630 RLDTAFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLS 689
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G++++G + +ML+ +++E +H+ CMVDMLGR GRL EA E + Q+P P
Sbjct: 690 ACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEP 749
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +LL AC HG+++MG +A+ L ++EP G Y+ +SN+Y G W+ LR+ +
Sbjct: 750 GVWGALLSACSYHGDLKMGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAVELRRII 809
Query: 587 KSKGVRKEVGFSWADVG 603
+ KG++K +S DVG
Sbjct: 810 QDKGLKKPAAYSLIDVG 826
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 150/535 (28%), Positives = 271/535 (50%), Gaps = 24/535 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI------GVV 54
+ Y ++ F + +F+ + D++ WN +++ S + F + +NL GV
Sbjct: 14 LTAYSRAADFSSSWALFDEILYRDVILWNAMITA---SVENQCFGVAVNLFVELMGEGVG 70
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D+ T +S G LH + K GL S+ ++ NALI MY++ G L + V
Sbjct: 71 LDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECV 130
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F M +D +SWN+++ G + +Y +++ +M + D+VS T A SA
Sbjct: 131 FGGMEYRDIISWNSMMRGCAYN-NYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGE 189
Query: 175 LELGKQIHGVSIKMGYG--THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM- 231
L G+ IHG IK+GY +H S N L+S YS+C A +F+ M ++++SW M
Sbjct: 190 LSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAML 249
Query: 232 --ISMNRE--DAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+++N+ +A L EM+L G V P+ VT + +I + L++EGR +HGL ++
Sbjct: 250 DGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREM 309
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ SV N LI MY++ + ++ +E VF + R+++SWNA+ISGY+QNG S A F
Sbjct: 310 GLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQ 369
Query: 347 VIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++ S+ + T ++L + ++E L+ G+ H +K+G ++P+ ++L+ MY
Sbjct: 370 LLQSYSQCSLSTLLAILPSCDSSE--FLQFGESIHCWQLKLGFANNPLAVNSLMLMYINC 427
Query: 406 GSIFESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLS 463
G + + ++ W +++ ++G + + F M ++ V DS+ +
Sbjct: 428 GDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFN 487
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
V++ CG ++ G L LK +E + ++ M GR G +E A + G
Sbjct: 488 VISACGNLELLFAGGSLHGLALKTL-MESDIRVQNALITMYGRCGEIENARIIFG 541
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 235/496 (47%), Gaps = 20/496 (4%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
+L+T YSR + +FDE+ +D + WNA+++ ++ +GV A+ +E+M +G+
Sbjct: 11 TSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGV-AVNLFVELMGEGV 69
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
LD + SA H NL G+ +HG+S K G + + N L+ Y+KC +
Sbjct: 70 GLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSEC 129
Query: 216 VFRRMHDRNVISWTTMI---SMNREDAVSL--FKEMRLDGVCPNDVTFIGLIHAISIGNL 270
VF M R++ISW +M+ + N SL FK+M ++V+ + A ++
Sbjct: 130 VFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGE 189
Query: 271 VKEGRMIHGLCIKTNF--LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ G++IHG IK + +S S N LI++Y++ +Q +E +F E+ ++I+SWNA++
Sbjct: 190 LSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAML 249
Query: 329 SGYAQN-----GLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
G A N L G + +P++ T ++ AE + L+ G+ H
Sbjct: 250 DGLALNQRIWEAFDLLHEMQLLGCV---QPDSVTVVIIIPL--CAELMLLREGRAVHGLT 304
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
++ + D V ++L+DMY K + ++ VF E+ +W A+IS +++G
Sbjct: 305 LRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQ 364
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
+ F+++ + T L++L C + + G + LK +P + ++ M
Sbjct: 365 HLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLK-LGFANNPLAVNSLMLM 423
Query: 504 LGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSY 563
G L L+ + + +++ C +G+ + A LM+ +P
Sbjct: 424 YINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALK-AFNLMRQDPDVCHDS 482
Query: 564 VLMSNLYAEKGDWEMV 579
V + N+ + G+ E++
Sbjct: 483 VALFNVISACGNLELL 498
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 174/349 (49%), Gaps = 24/349 (6%)
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSL 242
MG H+ L++ YS+ + +F + R+VI W MI+ + E+ AV+L
Sbjct: 1 MGALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNL 60
Query: 243 FKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
F E+ +GV + T + ++ A S +GNL +GR++HG+ KT LS+ +CN LI MYA
Sbjct: 61 FVELMGEGVGLDSTTLLIVVSASSHMGNLT-QGRVLHGISFKTGLLSDSFLCNALIDMYA 119
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSV 361
+ + SE VF + R+IISWN+++ G A N ++ +F + S A S+
Sbjct: 120 KCGELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLW-YFKKMAYSSEQADNV-SL 177
Query: 362 LNAVGAAEDI-SLKHGQRCHSHIIKVGLD--SDPIVGSALLDMYGKRGSIFESQRVFNET 418
AV A+ + L GQ H IK+G S ++L+ +Y + I ++ +F E
Sbjct: 178 TCAVSASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEM 237
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLSVLTVCGRNGMIHKG 477
+ K +W A++ LA + + EM+ G V+PDS+T + ++ +C ++ +G
Sbjct: 238 KYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREG 297
Query: 478 RHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
R + L+ D+ + S ++DM + ++ AE + IP
Sbjct: 298 RAVHGLTLRREMGLDFSVTNS------LIDMYSKCKDVKRAEHVFKAIP 340
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/594 (30%), Positives = 320/594 (53%), Gaps = 22/594 (3%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y L CLD + +H ++K G +V + L+ +Y++ G + +ARRVFD M
Sbjct: 70 YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ V+W ++ G+ Q+ AI EM+ G + ++ AC ++L+LG
Sbjct: 130 RRNVVAWTTLMVGFVQNSQ-PKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGD 188
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDA 239
Q H IK SVG+ L S YSKC DA K F R+ ++NVISWT+ +S ++
Sbjct: 189 QFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNG 248
Query: 240 -----VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+ LF EM + PN+ T + ++ G ++ LCIK + S V N
Sbjct: 249 APVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRN 308
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ------NGLSLA-----AVQA 343
L+ +Y + + ++ ++F+ + +++WNA+I+G+AQ + LS A++
Sbjct: 309 SLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKL 368
Query: 344 FFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
F + + KP+ +T SVL+ + ++++ G++ H+ IK G SD IV ++L+ MY
Sbjct: 369 FSKLNLSGMKPDLFTLSSVLSV--CSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMY 426
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K GSI + + F E ++ AWT++I+ ++HG + ++ F++M GVRP+++TF+
Sbjct: 427 SKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFV 486
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
VL+ C GM+ + + F+ M K Y I+P+ DHY CMVDM R+GRLE+A + ++
Sbjct: 487 GVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNY 546
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
P + + + C+ HGN+E+G A+ L+ ++P +YVL+ N+Y +E V+ +
Sbjct: 547 EPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRV 606
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
RK M+ + V K +SW + D ++ F + THP+S I + E L +++K
Sbjct: 607 RKMMEEEKVGKLKDWSWISIK--DKVYSFKTNGKTHPQSSLICKSLEDLLAKVK 658
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 239/463 (51%), Gaps = 27/463 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+N+Y K G + A +F+N+ ++V+W T++ GF + A+ M G
Sbjct: 109 VNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSV 168
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S L C + G Q H+ I+K+ +D + VG+AL ++YS+ GRL +A + F
Sbjct: 169 YTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSR 228
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ K+ +SW + +S +G V+ + +EM+ ++ + + TSA S C +LEL
Sbjct: 229 IREKNVISWTSAVSACADNGA-PVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLEL 287
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G Q++ + IK GY +++ V N L+ Y K +A+++F RM D ++++W MI+ + +
Sbjct: 288 GTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQ 347
Query: 238 ----------------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+A+ LF ++ L G+ P+ T ++ S +++G IH
Sbjct: 348 MMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQT 407
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IKT FLS+ V LI+MY++ S++ + K F E+S R +I+W ++I+G++Q+G+S A+
Sbjct: 408 IKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQAL 467
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SAL 398
F + + +PNA TF VL+A A +S + I++ P + +
Sbjct: 468 HIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALN---YFEIMQKKYKIKPAMDHYECM 524
Query: 399 LDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+DM+ + G + ++ + E SEF W+ I+ HG+ E
Sbjct: 525 VDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLE 567
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 202/394 (51%), Gaps = 32/394 (8%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAV 58
++Y K G+ + AL F+ + +++SW + +S + L + M + + +
Sbjct: 211 SLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEF 270
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T ++ALS C + G Q++SL +KFG +S + V N+L+ +Y + G +VEA R+F+ M
Sbjct: 271 TLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRM 330
Query: 119 PNKDSVSWNAILSGYTQDGDY----------GVEAILALIEMMRKGLRLDHVSFTSAASA 168
+ V+WNA+++G+ Q + G EA+ ++ G++ D + +S S
Sbjct: 331 DDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSV 390
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C +E G+QIH +IK G+ + V V L+S YSKC A+K F M R +I+W
Sbjct: 391 CSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAW 450
Query: 229 TTMIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
T+MI+ M+++ A+ +F++M L GV PN VTF+G++ A S +V + + + +
Sbjct: 451 TSMITGFSQHGMSQQ-ALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQA-LNYFEIM 508
Query: 283 KTNFLSEPSV--CNCLITMYARFESMQDSEKVFDELSCR--EIISWNALISGYAQNG--- 335
+ + +P++ C++ M+ R ++ + +++ E I W+ I+G +G
Sbjct: 509 QKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFI-WSNFIAGCKSHGNLE 567
Query: 336 LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAE 369
L A + +K P Y +LN +AE
Sbjct: 568 LGFYAAEQLLS-LKPKDPETYVL--LLNMYLSAE 598
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 201/617 (32%), Positives = 325/617 (52%), Gaps = 22/617 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLI----GVVF 55
MY + G A+ +F+ + D+V+W V+SG ++ + + + ++M + G
Sbjct: 160 MYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARP 219
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ T + L C G LH VK G+ V +AL +MYS+ +A +F
Sbjct: 220 NSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILF 279
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
E+ KD VSW ++ Y + G EA+ EM + GL+ D V + S G N+
Sbjct: 280 PELTEKDVVSWTGLIGAYCRRG-LAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANV 338
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
GK H V I+ +G V + N L+S Y K E+ A VF +H R+ SW+ M++
Sbjct: 339 NRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGY 398
Query: 236 RE-----DAVSLFKEMRL---DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + L+++M+ D + + + I + S ++ G+ +H IK L
Sbjct: 399 CKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKC-LL 457
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAFFG 346
E S+ N LI MY R + + + K+F R ++++WNALIS Y+ G S A+ +
Sbjct: 458 DENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQ 517
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ E KPN+ T +V++A A +L+HG+ HS++ +GL+SD + +AL+DMY K
Sbjct: 518 MLTEDVKPNSSTLITVISA--CANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKC 575
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++ +F+ ++ W +IS HG+ + F EME ++P+S+TFL++L
Sbjct: 576 GQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAIL 635
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ +GR LF M Y +EP+ HY+CMVD+LG+ G L+EAE+LV +P P
Sbjct: 636 SACCHAGLVDEGRKLFIRM-GGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPD 694
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
V +LL AC++H N EMG R+A +P G Y+LMSN Y W+ + LR
Sbjct: 695 GGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYILMSNSYGSAEKWDEIEKLRDT 754
Query: 586 MKSKGVRKEVGFSWADV 602
MK+ GV K VG+S DV
Sbjct: 755 MKNYGVEKGVGWSAVDV 771
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/533 (29%), Positives = 268/533 (50%), Gaps = 23/533 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++ Y SG A F+ PD WN++L + D ALS RM G
Sbjct: 54 VSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCASDFDSALSAHRRMRASGARPSR 113
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGL---DSEVYVGNALITMYSRWGRLVEARRV 114
T A S + G +HS VKFGL D V V ++L+ MY+R G L +A ++
Sbjct: 114 FTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKL 173
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR----KGLRLDHVSFTSAASACG 170
FDEM +D V+W A++SG ++G+ G + I L++M+R G R + + S ACG
Sbjct: 174 FDEMVERDVVAWTAVVSGCVRNGECG-KGICYLVQMIRLAGDSGARPNSRTMESGLEACG 232
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
L G+ +HG ++K G V + L S YSKC++T DA +F + +++V+SWT
Sbjct: 233 VLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFPELTEKDVVSWTG 292
Query: 231 MI------SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
+I + RE AV LF+EM G+ P++V ++ + V G+ H + I+
Sbjct: 293 LIGAYCRRGLARE-AVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRR 351
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
NF + N LI+MY +FE + + VF L R+ SW+ +++GY + GL + ++ +
Sbjct: 352 NFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELY 411
Query: 345 FGV-IKESKPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
+ ++ S+++A+ + + L+ GQ H + IK LD + I S L+ MY
Sbjct: 412 RQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLDENSITNS-LIGMY 470
Query: 403 GKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
G+ G+ + ++F + + + W A+IS+ + G ++ + +M + V+P+S T
Sbjct: 471 GRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTL 530
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
++V++ C + G L S +K+ +E + +VDM + G+L A
Sbjct: 531 ITVISACANLAALEHG-ELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTAR 582
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 147/312 (47%), Gaps = 15/312 (4%)
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SM 234
++H ++ G + L+S YS + G A F + W +++ +
Sbjct: 33 RLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCAS 92
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS---EPS 291
+ + A+S + MR G P+ T A + + G +H +K L+ +
Sbjct: 93 DFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSVA 152
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-- 349
V + L+ MYAR S+ D+ K+FDE+ R++++W A++SG +NG + +I+
Sbjct: 153 VSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLA 212
Query: 350 ---ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++PN+ T S L A G ++S G+ H + +K G+ +V SAL MY K
Sbjct: 213 GDSGARPNSRTMESGLEACGVLGELS--AGRCLHGYAVKEGIRDCALVVSALFSMYSKCD 270
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
++ +F E EK +WT +I A R G + F+EME G++PD + VL+
Sbjct: 271 MTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLS 330
Query: 467 VCGRNGMIHKGR 478
G + +++G+
Sbjct: 331 GLGSSANVNRGK 342
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K GQ A IF+++ D+V+WN ++SG+ +++ AL M + ++
Sbjct: 569 VDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNS 628
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T+ LS C H G + G +L + + L+ + ++ + + G L EA +
Sbjct: 629 LTFLAILSACC-HAGLVDEGRKLFIRMGGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVL 687
Query: 117 EMPNK-DSVSWNAILSG 132
MP K D W +LS
Sbjct: 688 AMPIKPDGGVWGTLLSA 704
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 205/638 (32%), Positives = 338/638 (52%), Gaps = 20/638 (3%)
Query: 13 ALCIFNNLNNP--DIVSWNTVLSGFEKSD--DALS-FALRMNLIGVVFDAVTYSTALSFC 67
A +F+++ D+ SWN++L+ + DALS F ++ V+ +++ A +
Sbjct: 68 AFAVFDDIPPAARDVASWNSLLNPLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAA 127
Query: 68 LDHEGFLFGLQLHSLIVKF-GLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSW 126
G H+L K S VYV +L+ MY + G + +ARR+FD MP ++S SW
Sbjct: 128 ARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSW 187
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA--SACGHEKNLELGKQIHGV 184
+ +++GY + E L +M + + F + A SA L +G+Q+HG+
Sbjct: 188 STMVAGYA--AEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGL 245
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----A 239
+K G VSV N L++ Y+K G A VF +RN I+W+ MI+ ++ A
Sbjct: 246 IVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSA 305
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
VS+F +M G P + TF+G+++A S + G+ HGL +K F + V + L+ M
Sbjct: 306 VSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDM 365
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTF 358
YA+ + D+++ FD+L +I+ W A++SG+ QNG A+ + + KE P+ T
Sbjct: 366 YAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTI 425
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
S L A +L+ G++ H+ I+K GL VGSAL MY K G++ + VF
Sbjct: 426 ASGLRACAGIA--ALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRI 483
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
++ AW +IIS +++G ++ F+EM+ +G PD+ITF+++L C G++ +G
Sbjct: 484 PDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGW 543
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRI 538
F M KDY + P DHY+CMVD+L R G L+EA++ + I G + + +LGACR
Sbjct: 544 EYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRS 603
Query: 539 HGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
+ ++G + LM++ S +Y+L+SN+YA + W V +R M+ +GV K+ G S
Sbjct: 604 LRDFDVGAYAGERLMELGTRDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCS 663
Query: 599 WADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
W ++ +H F G+ HP +E I L MK
Sbjct: 664 WVELN--SRVHVFVVGEQQHPEAENINAQLRRLAKHMK 699
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 232/462 (50%), Gaps = 24/462 (5%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGR--LVEARRVFDEMPN--KDSVSWNAILS 131
G LH+ +K G S V N+LI YS R L A VFD++P +D SWN++L+
Sbjct: 31 GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLN 90
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHV-SFTSAASACGHEKNLELGKQIHGVSIKMGY 190
++ ++A+ M+ L SF +A +A + G H ++ K+
Sbjct: 91 PLSRHRP--LDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPS 148
Query: 191 G-THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFK 244
++V V L++ Y K + DA ++F M RN SW+TM++ E+A LF+
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR 208
Query: 245 EMRLDGVCPNDVT-FI--GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
M + CP++ + F+ ++ A+S+ + G +HGL +K L SV N L+TMYA
Sbjct: 209 LMLEE--CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYA 266
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
+ M + VF+ R I+W+A+I+GYAQNG + +AV F + P +TF
Sbjct: 267 KAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVG 326
Query: 361 VLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
VLN A+ D+ +L G++ H ++K+G + V SAL+DMY K G I +++ F++
Sbjct: 327 VLN---ASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLY 383
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
E WTA++S ++G++E + + M+ +G+ P T S L C + G+
Sbjct: 384 EVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQ 443
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
L ++K Y + S + M + G LE+ + +IP
Sbjct: 444 LHTQIVK-YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP 484
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 200/377 (53%), Gaps = 17/377 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF--EKSDDALSFALRMNLIGVV---- 54
+NMYCK G A +F+ + + SW+T+++G+ EK + R+ L
Sbjct: 160 LNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKS 219
Query: 55 -FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
F A +A+S L G L G Q+H LIVK GL V V N+L+TMY++ G + A
Sbjct: 220 EFVATAVLSAVSVPL---GLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFH 276
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VF+ ++S++W+A+++GY Q+G+ A+ +M G +F +A
Sbjct: 277 VFESSRERNSITWSAMITGYAQNGE-ADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLG 335
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L +GKQ HG+ +K+G+ + V + L+ Y+KC DA + F ++++ +++ WT M+S
Sbjct: 336 ALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVS 395
Query: 234 MN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ E+A++L+ M +G+ P+ T + A + ++ G+ +H +K
Sbjct: 396 GHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGL 455
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
V + L TMY++ +++D VF + R++I+WN++ISG++QNG A+ F +
Sbjct: 456 GAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMK 515
Query: 349 KE-SKPNAYTFGSVLNA 364
E + P+ TF ++L A
Sbjct: 516 MEGTIPDNITFINILCA 532
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
MY K G + + +F + + D+++WN+++SGF ++ + AL M + G + D +
Sbjct: 465 TMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNI 524
Query: 59 TYSTALSFCLDHEGFL-FGLQLHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ L C H G + G + SL+ K +GL + ++ + SR G L EA+ +
Sbjct: 525 TFINILCAC-SHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIE 583
Query: 117 EMP-NKDSVSWNAILSG--YTQDGDYGVEAILALIEM 150
+ + + W +L +D D G A L+E+
Sbjct: 584 SITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMEL 620
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 188/660 (28%), Positives = 349/660 (52%), Gaps = 23/660 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN--PDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVF 55
+++Y + A +F+ + + ++V WN ++ + ++A+ +M G+
Sbjct: 58 VDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITP 117
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T+ L C + G ++H I + L+S VYV AL+ Y++ G L +A+ VF
Sbjct: 118 NRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVF 177
Query: 116 DEMPNKDSVSWNAILSGYT-QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
D+M +D V+WN+++SG++ +G Y + + L+ M+ + + + A +
Sbjct: 178 DKMHKRDVVAWNSMISGFSLHEGSY--DEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNS 235
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS 233
L GK+IHG ++ G+ V VG ++ Y KC+ A ++F M +N ++W+ M+
Sbjct: 236 LRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVG 295
Query: 234 MN-----REDAVSLFKEMRL---DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+A+ LF ++ + D + + VT +I + + G +H IK+
Sbjct: 296 AYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSG 355
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F+ + V N L++MYA+ + + + F+E+ R+ +S+ A+ISGY QNG S ++ F
Sbjct: 356 FVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFL 415
Query: 346 GV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ + P T SVL A A L +G H + I G +D ++ +AL+DMY K
Sbjct: 416 EMQLSGINPEKATLASVLPA--CAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAK 473
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G I +++VF+ ++ +W +I A HG + F M+++G++PD +TF+ +
Sbjct: 474 CGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICL 533
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
++ C +G++ +G++ F++M +D+ I P +HY+CMVD+L R G +E + ++P P
Sbjct: 534 ISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEP 593
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ V +LL ACR++ NVE+GE ++ + K+ P +G++VL+SN+Y+ G W+ A +R
Sbjct: 594 DVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRF 653
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGF-SSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
K +G K G SW ++ + +H F G +HP+ +I + L EMK L + E
Sbjct: 654 TQKEQGFEKSPGCSWIEISGV--VHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAE 711
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 230/460 (50%), Gaps = 27/460 (5%)
Query: 98 LITMYSRWGRLVEARRVFDEMPN--KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
L+ +Y L AR VFD+MP+ K+ V WN ++ Y +G Y EAI +M+ G+
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYE-EAIDLYYKMLGYGI 115
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
+ +F AC K G++IH ++ ++V V L+ Y+KC DA +
Sbjct: 116 TPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKE 175
Query: 216 VFRRMHDRNVISWTTMIS------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN 269
VF +MH R+V++W +MIS + ++ L +M+ D V PN T +G++ A++ N
Sbjct: 176 VFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQVN 234
Query: 270 LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALI 328
++ G+ IHG C++ F+ + V ++ +Y + + + + ++FD + + ++W+A++
Sbjct: 235 SLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMV 294
Query: 329 SGYAQNGLSLAAVQAFFGVIKESKP----NAYTFGSVLNAVGAAEDISLKHGQRCHSHII 384
Y A++ F ++ +A T +V+ D+S G H + I
Sbjct: 295 GAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLST--GTCLHCYAI 352
Query: 385 KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMN 444
K G D +VG+ LL MY K G I + R FNE + ++TAIIS ++G+ E +
Sbjct: 353 KSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLR 412
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG--RHLFDSMLKDYHIEPSPDHYSC--M 500
F EM+ G+ P+ T SVL C +H G H + +++ + + D C +
Sbjct: 413 MFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCY-AIICGF----TADTMICNAL 467
Query: 501 VDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
+DM + G+++ A ++ ++ G+ +++ A IHG
Sbjct: 468 IDMYAKCGKIDTARKVFDRMH-KRGIVSWNTMIIAYGIHG 506
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 202/650 (31%), Positives = 348/650 (53%), Gaps = 49/650 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++ Y + GQ + AL +FN + V++N ++SG+ ++ + + VF+ +
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNN-------KFDCARKVFEKMPD 119
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGL--DSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+S+ + G++ L + F + +V NA+++ +++ G + EAR++FD+M
Sbjct: 120 RDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM 179
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K+ +SWN +LS Y Q+G +E L + + + VS+ +K L+
Sbjct: 180 LVKNEISWNGLLSAYVQNGR--IEDARRLFD---SKMDWEIVSWNCLMGGYVRKKRLDDA 234
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MN 235
+ + +M +S N++++ Y++ + +A ++F + R+V +WT M+S N
Sbjct: 235 RSLFD---RMPVRDKIS-WNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQN 290
Query: 236 --REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
++A +F+EM N+V++ +I +++ R + N S
Sbjct: 291 GMLDEATRIFEEMPE----KNEVSWNAMIAGYVQSQQIEKARELFDQMPSRN----TSSW 342
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N ++T YA+ ++ ++ +FDE+ R+ ISW A+ISGYAQ+G S A+ F + ++
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRD--- 399
Query: 354 NAYTFGSVLNAVG-------AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
G +LN AE +L+ G++ H ++K G + I G+ALL MYGK G
Sbjct: 400 -----GGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCG 454
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
SI E+ VF + EK +W +I+ ARHG + + F+ M+ ++PD +T + VL+
Sbjct: 455 SIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLS 513
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G + KG F+SM ++Y I + HY+CM+D+LGR GRL+EA L+ +P P
Sbjct: 514 ACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDA 573
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
+ +LLGA RIHG+ E+GE+ A+ + +MEP SG YVL+SNLYA G W V +R M
Sbjct: 574 ATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKM 633
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ KGV+K G+SW ++ + H F+ GD +HP +E IY E L E+K
Sbjct: 634 RDKGVKKVPGYSWVEIQ--NKTHIFTVGDCSHPEAERIYAYLEELDLELK 681
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 204/460 (44%), Gaps = 78/460 (16%)
Query: 105 WGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS 164
W + +E++ + + D V WN +S Y + G E+ L++ MR R V++ +
Sbjct: 42 WTQKLESKNSDSTIVDSDIVKWNRKISAYMRKGQ--CESALSVFNGMR---RRSTVTYNA 96
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
S + +++ KM +S NV++S Y K A +F +M +++
Sbjct: 97 MISGYLSNNKFDCARKVFE---KMPDRDLIS-WNVMLSGYVKNGNLSAARALFNQMPEKD 152
Query: 225 VISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
V+SW M+S E+A +F +M + N++++ GL+ A +++ R +
Sbjct: 153 VVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFD 208
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
+ +S NCL+ Y R + + D+ +FD + R+ ISWN +I+GYAQNGL
Sbjct: 209 SKMDWEIVS----WNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSE 264
Query: 340 AVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
A + F E++ ++ D +A++
Sbjct: 265 ARRLF------------------------EELPIR----------------DVFAWTAMV 284
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
+ + G + E+ R+F E EK+E +W A+I+ + E F +M ++ ++
Sbjct: 285 SGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR----NTS 340
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD--HYSCMVDMLGRVGRLEEAEELV 517
++ +++T + G I + + LFD M P D ++ M+ + G+ EEA L
Sbjct: 341 SWNTMVTGYAQCGNIDQAKILFDEM-------PQRDCISWAAMISGYAQSGQSEEALHLF 393
Query: 518 GQIPGGPGL---SVLQSLLGACRIHGNVEMGERIADALMK 554
++ G+ S L L +C +E+G+++ L+K
Sbjct: 394 IKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVK 433
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 201/673 (29%), Positives = 348/673 (51%), Gaps = 53/673 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTY 60
YC S Q A +F + ++VSW ++SG+ E A +M+ G++ D +
Sbjct: 168 YCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNF 227
Query: 61 STALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVE-ARRVFDEM 118
++ALS + G L L+ L L +K G + +V +G A++ +YSR +++ A + F+ M
Sbjct: 228 ASALS-AVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM 286
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
++ +W+ +++ + G ++A +A+ E + + + CG + +
Sbjct: 287 IERNEYTWSTMIAALSHGGR--IDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARIL 344
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+ I + + N L++ Y + + +A ++F +M RN ISW MI+
Sbjct: 345 FEQIPEPIVVSW-------NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQN 397
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E+A+ L +E+ G+ P+ + + A S ++ G +H L +K C
Sbjct: 398 GRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFAC 457
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N LITMY + +M+ + +VF + ++I+SWN+ ++ QN L A F ++
Sbjct: 458 NALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDV 517
Query: 354 N------AYTFGSVLN-AVGAAEDISLKH-----------------------GQRCHSHI 383
+ AY N A+GA + + +H GQ+ H+
Sbjct: 518 SWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVA 577
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
IK+G+DS+ IV +AL+ MY K G +S+R+F+ +E+ F W II+ A+HG +
Sbjct: 578 IKLGMDSELIVANALISMYFKCGCA-DSRRIFDLMEERDIFTWNTIITGYAQHGLGREAI 636
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
++ ME+ GV P+ +TF+ +L C G++ +G F SM +DY + P P+HY+CMVD+
Sbjct: 637 KMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDL 696
Query: 504 LGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSY 563
LGR G ++ AE+ + +P P + +LLGAC+IH N E+G+R A+ L ++EP+ +G+Y
Sbjct: 697 LGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNY 756
Query: 564 VLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEE 623
V++SN+Y+ G W VA +RK MK +GV KE G SW + D +H F +GD H + EE
Sbjct: 757 VMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIK--DKMHSFVTGDKQHEQIEE 814
Query: 624 IYRMAECLGSEMK 636
I E L + +K
Sbjct: 815 IVATLEELYTLLK 827
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 247/507 (48%), Gaps = 39/507 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++ YC +G D A +++ ++ ++ + +LSG+ + L R G++
Sbjct: 72 ISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLE--ARRVFDGMLERNTVA 129
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
A+ C G + + + +V N+++T Y ++V+AR +F++MP
Sbjct: 130 WNAMISCYVQNG---DITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPE 186
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
++ VSW ++SGY + ++G +A +M R+GL D +F SA SA NL++ +
Sbjct: 187 RNLVSWTVMISGYGRIENHG-KAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLES 245
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSK-CEVTGDANKVFRRMHDRNVISWTTMISM----N 235
+ +++K G+ V +G +++ YS+ V A K F M +RN +W+TMI+
Sbjct: 246 LRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGG 305
Query: 236 RED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC- 293
R D A+++++ + + GL + + R++ + EP V
Sbjct: 306 RIDAAIAVYERDPVKSIACRTALITGLAQC----GRIDDARILF------EQIPEPIVVS 355
Query: 294 -NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N LIT Y + + +++++FD++ R ISW +I+GYAQNG S A+ G+++E
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEAL----GLLQELH 411
Query: 353 -----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
P+ + S+ A + ++L+ G + HS +KVG + +AL+ MYGK +
Sbjct: 412 RSGMLPSLSSLTSIFFA--CSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRN 469
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +++VF+ K +W + ++AL ++ + N F M ++ D +++ ++++
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISA 525
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSP 494
++ F +M ++ + SP
Sbjct: 526 YAHAEQSNEAMGAFKTMFCEHELPNSP 552
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 224/525 (42%), Gaps = 104/525 (19%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFC 67
G+ +A +F+ + DI++WN+++S + + + A R ++DA++
Sbjct: 48 GRVGEAREVFDAMPRRDIIAWNSMISAY--CHNGMPDAAR-----DLYDAIS-------- 92
Query: 68 LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN 127
+ G L++ Y R GR++EARRVFD M +++V+WN
Sbjct: 93 ---------------------GGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWN 131
Query: 128 AILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
A++S Y Q+GD I M R+ F + S
Sbjct: 132 AMISCYVQNGD---------ITMARR-------LFDAMPS-------------------- 155
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSL 242
VS N +++ Y DA +F +M +RN++SWT MIS N A +
Sbjct: 156 ----RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDI 211
Query: 243 FKEMRLDGVCPNDVTFIGLIHAIS-IGNL-VKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
F +M +G+ P+ F + A+ +GNL V E + L +KT F + + ++ +Y
Sbjct: 212 FCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRV--LALKTGFERDVVIGTAILNVY 269
Query: 301 ARFESMQDSE-KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFG 359
+R S+ D+ K F+ + R +W+ +I+ + G AA+ + +S
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI 329
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS--ALLDMYGKRGSIFESQRVFNE 417
+ L G +D + Q +PIV S AL+ Y + G + E++ +F++
Sbjct: 330 TGLAQCGRIDDARILFEQ-----------IPEPIVVSWNALITGYMQNGMVNEAKELFDK 378
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
++ +W +I+ A++G E + +E+ G+ P + S+ C + G
Sbjct: 379 MPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETG 438
Query: 478 RHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQI 520
+ +K + + ++C ++ M G+ +E A ++ ++
Sbjct: 439 TQVHSLAVK---VGCQFNSFACNALITMYGKCRNMEYARQVFSRM 480
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 52/263 (19%)
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
E S C+ I R + ++ +VFD + R+II+WN++IS Y NG+ AA + +
Sbjct: 33 EVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAI- 91
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S N T G+ LL YG+ G +
Sbjct: 92 --SGGNMRT-------------------------------------GAILLSGYGRLGRV 112
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E++RVF+ E++ AW A+IS ++GD F M ++ D ++ S+LT
Sbjct: 113 LEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR----DVSSWNSMLTGY 168
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG---PG 525
+ + R+LF+ M E + ++ M+ GR+ +A ++ ++ P
Sbjct: 169 CHSLQMVDARNLFEKM-----PERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPD 223
Query: 526 LSVLQSLLGACRIHGNVEMGERI 548
S S L A + GN+++ E +
Sbjct: 224 QSNFASALSAVKGLGNLDVLESL 246
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/568 (34%), Positives = 301/568 (52%), Gaps = 23/568 (4%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH+L V G ++ +V +AL +Y R +AR+VFD +P+ D+V WN +L+G +
Sbjct: 145 LHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLS---- 200
Query: 139 YGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
G EA+ A + M G +R D + S A N +G+ +H K G H V
Sbjct: 201 -GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVV 259
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVC 252
L+S Y+KC A +F RM +++++ +IS + +V LFKE+ G+
Sbjct: 260 TGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLR 319
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ T + LI S +H +K + V L T+Y RF M + +
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRA 379
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAED 370
FD + + + SWNA+ISGYAQNGL+ AV A F ++ +PN T S L+A
Sbjct: 380 FDAMPEKTMESWNAMISGYAQNGLTEMAV-ALFQQMQALNVRPNPLTISSALSACAQLGA 438
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+SL G+ H I L+ + V +AL+DMY K GSI E++ +F+ K+ +W +I
Sbjct: 439 LSL--GKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMI 496
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
S HG + +K+M + + P S TFLSVL C G++ +G +F SM DY I
Sbjct: 497 SGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGI 556
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG---GPGLSVLQSLLGACRIHGNVEMGER 547
P +H +CMVD+LGR G+L+EA EL+ + P GPG + +LLGAC +H + ++ +
Sbjct: 557 TPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPG--IWGALLGACMVHKDGDLAKL 614
Query: 548 IADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG 607
+ L ++EP +G YVL+SNLY K + A++R+ KS+ + K G + ++GD
Sbjct: 615 ASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRP- 673
Query: 608 LHGFSSGDNTHPRSEEIYRMAECLGSEM 635
H F +GD HP+S+ IY E L ++M
Sbjct: 674 -HVFMAGDRAHPQSDAIYLYLEKLTAKM 700
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 176/343 (51%), Gaps = 20/343 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD-DALSFALRMNLIGVVFDAVT 59
+++Y K G + A +F+ + PD+V++N ++SG+ + S L L+G+ +
Sbjct: 263 ISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSS 322
Query: 60 YSTALSFCLDHEGF----LFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
ST ++ H F L G LH+ +VK GLD+ V AL T+Y R+ + ARR F
Sbjct: 323 -STLVALIPVHSPFGHEPLAGC-LHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAF 380
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKN 174
D MP K SWNA++SGY Q+G E +AL + M+ +R + ++ +SA SAC
Sbjct: 381 DAMPEKTMESWNAMISGYAQNGL--TEMAVALFQQMQALNVRPNPLTISSALSACAQLGA 438
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
L LGK +H + +V V L+ Y KC +A +F M ++NV+SW MIS
Sbjct: 439 LSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISG 498
Query: 234 ----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+A+ L+K+M + P TF+ +++A S G LVKEG + + +++
Sbjct: 499 YGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFR-SMTSDYGIT 557
Query: 290 PSV--CNCLITMYARFESMQDSEKVFDELSCREIIS--WNALI 328
P + C C++ + R ++++ ++ E + W AL+
Sbjct: 558 PGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALL 600
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 215/458 (46%), Gaps = 29/458 (6%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVV-FDAVTYSTALSFCLDHEGFL 74
+F+ + +PD V WNT+L+G S +AL +RM G V D+ T ++ L +
Sbjct: 180 VFDAVPSPDTVLWNTLLAGLSGS-EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTT 238
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
G +H+ K GL +V LI++Y++ G + AR +FD M D V++NA++SGY+
Sbjct: 239 MGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYS 298
Query: 135 QDGDYGVEAILALIEMMRKGLRLDH---VSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
+G G L E++ GLR V+ S GHE L +H +K G
Sbjct: 299 INGMVGSSVEL-FKELVGMGLRPSSSTLVALIPVHSPFGHEP---LAGCLHAHVVKAGLD 354
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEM 246
+ V L + Y + A + F M ++ + SW MIS ++ AV+LF++M
Sbjct: 355 ANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQM 414
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+ V PN +T + A + + G+ +H + V LI MY + S+
Sbjct: 415 QALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSI 474
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV 365
++ +FD + + ++SWN +ISGY +G A++ + ++ P + TF SVL A
Sbjct: 475 AEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYAC 534
Query: 366 ---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
G ++ + + I G++ + ++D+ G+ G + E+ + +E + +
Sbjct: 535 SHGGLVKEGTTVFRSMTSDYGITPGIEH----CTCMVDLLGRAGQLKEAFELISEFPKSA 590
Query: 423 --EFAWTAIISALARH--GDYESVMNQ--FK-EMENKG 453
W A++ A H GD + +Q F+ E EN G
Sbjct: 591 VGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTG 628
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 142/332 (42%), Gaps = 40/332 (12%)
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT--HVSVGNVLMSTYSKCEVTG 211
LR ++ S +S GH Q+ VS+ G+ T H ++L+ S
Sbjct: 22 ALRRSYLRLISLSSTLGHLD------QLLAVSLASGHYTLDHAPASSLLLRYASLRSPPA 75
Query: 212 DANKVFRRMH--DRNVISWTTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN 269
+++R DR + R + +R D + P+ +F A S+ +
Sbjct: 76 HLLRLYRAFPRPDRFL----------RNSLLRSLPTLRADLLFPSPDSFSFAFAATSLAS 125
Query: 270 LVKEG------------RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
G R +H L + + F ++ V + L +Y D+ KVFD +
Sbjct: 126 SCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVP 185
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKH 375
+ + WN L++G + + A++AF + +P++ T SVL A AAE +
Sbjct: 186 SPDTVLWNTLLAGLSGS----EALEAFVRMAGAGSVRPDSTTLASVLPA--AAEVANTTM 239
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G+ H+ K GL V + L+ +Y K G + ++ +F+ + + A+IS +
Sbjct: 240 GRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSI 299
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+G S + FKE+ G+RP S T ++++ V
Sbjct: 300 NGMVGSSVELFKELVGMGLRPSSSTLVALIPV 331
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDA--- 57
++MY K G +A CIF++++N ++VSWN ++SG+ A + L + DA
Sbjct: 465 IDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQG---AEALKLYKDMMDAHLH 521
Query: 58 VTYSTALS--FCLDHEGFLF--GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
T ST LS + H G + S+ +G+ + ++ + R G+L EA
Sbjct: 522 PTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFE 581
Query: 114 VFDEMPNKDSVS---WNAILSG--YTQDGDYGVEAILALIEM 150
+ E P K +V W A+L +DGD A L E+
Sbjct: 582 LISEFP-KSAVGPGIWGALLGACMVHKDGDLAKLASQKLFEL 622
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/566 (34%), Positives = 304/566 (53%), Gaps = 13/566 (2%)
Query: 79 LHSLIVKF-GLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
+H+L K S V+V AL+ MY + G + +A+ VFDEMP+++ VSW A+++GY
Sbjct: 139 VHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAAR- 197
Query: 138 DYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
EA +M+ + L + T+ SA L +G Q+HG+ +K G VSV
Sbjct: 198 KCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSV 257
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGV 251
N L++ Y+K A VF +RN I+W+ MI+ N E AV +F +M G
Sbjct: 258 ENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGF 317
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P + T +G+++A S + EG+ HGL +K F + V + L+ MYA+ + D+++
Sbjct: 318 PPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKE 377
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAED 370
F++ S +I+ W A+++G+ QNG A+ + + KE PN T S+L A
Sbjct: 378 CFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLA- 436
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+L+ G++ H+ I+K G VGSAL MY K G++ + VF + AW +II
Sbjct: 437 -ALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSII 495
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
S +++G +N F+EM+ +G PD +TF++VL C G++ +G F SM+KDY +
Sbjct: 496 SGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGL 555
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIAD 550
P DHY+CMVD+L R G L EA++ + I G + + +LGACR + ++G +
Sbjct: 556 TPRLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGE 615
Query: 551 ALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHG 610
LM + S +Y+L+SN+YA + W V +R MK GV K+ G SW ++ +H
Sbjct: 616 KLMDLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELN--SRVHV 673
Query: 611 FSSGDNTHPRSEEIYRMAECLGSEMK 636
F G+ HP +E I LG MK
Sbjct: 674 FVVGEQQHPDAEIINTELRRLGKHMK 699
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 203/377 (53%), Gaps = 17/377 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFALRMNLIGVV----- 54
+NMYCK G A +F+ + + + VSW +++G+ + +F L ++G
Sbjct: 160 LNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKN 219
Query: 55 -FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
F A +A+S L G G+Q+H L+VK G+ V V N+L+TMY++ G + A
Sbjct: 220 EFVATAVLSAISVPL---GLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFH 276
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VF+ ++S++W+A+++GY+Q+G+ A+ +M G + +AC
Sbjct: 277 VFESSKERNSITWSAMITGYSQNGN-AESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVG 335
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L GKQ HG+ +K+G+ V V + L+ Y+KC GDA + F + + +++ WT M++
Sbjct: 336 TLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVT 395
Query: 234 MNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ E A+ L+ M +GV PN +T L+ A + ++ G+ +H +K F
Sbjct: 396 GHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGL 455
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV- 347
SV + L TMY++ +++D VF + R++I+WN++ISG++QNG A+ F +
Sbjct: 456 GASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMK 515
Query: 348 IKESKPNAYTFGSVLNA 364
++ + P+ TF +VL A
Sbjct: 516 LEGTAPDPVTFINVLCA 532
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 230/466 (49%), Gaps = 32/466 (6%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV--EARRVFDEMP--NKDSVSWNAILS 131
G LH+ +K G S V N+LIT YS + RL A VF ++P +D SWN++L+
Sbjct: 31 GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHV-----SFTSAASACGHEKNLELGKQIHGVSI 186
+ LA + R L + SF +A +A + G +H ++
Sbjct: 91 PLSH------HRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALAC 144
Query: 187 KM-GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAV 240
K+ ++V V L++ Y K + DA VF M RN +SW M++ ++A
Sbjct: 145 KLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAF 204
Query: 241 SLFKEMRLDGVCP---NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
LF++M G CP N+ ++ AIS+ + G +HGL +K + SV N L+
Sbjct: 205 ELFRQML--GECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLV 262
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
TMYA+ M + VF+ R I+W+A+I+GY+QNG + +AV+ F + P +
Sbjct: 263 TMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEF 322
Query: 357 TFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
T VLN A D+ +L G++ H ++K+G + V SAL+DMY K G I +++ F
Sbjct: 323 TLVGVLN---ACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECF 379
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
N+ E WTA+++ ++G++E + + M+ +GV P+++T S+L C +
Sbjct: 380 NQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALE 439
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
G+ L +LK + S + M + G LE+ + ++P
Sbjct: 440 PGKQLHTQILK-FGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMP 484
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
MY K G + + +F + + D+++WN+++SGF ++ +DA++ M L G D V
Sbjct: 465 TMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPV 524
Query: 59 TYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
T+ L C L G+ + S+I +GL + ++ + SR G L EA+
Sbjct: 525 TFINVLCACSHMGLVDRGWTY---FRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDF 581
Query: 115 FDEMP-NKDSVSWNAILSGYTQDGDYGVEA 143
+ + + + W +L D+ V A
Sbjct: 582 IESITIDHGTCLWRIVLGACRSLRDFDVGA 611
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 191/634 (30%), Positives = 353/634 (55%), Gaps = 20/634 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI----GVVFDAV 58
MY ++G A +F+ + D+V+W+T++S ++ + L ALRM GV DAV
Sbjct: 703 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLK-ALRMFKCMVDDGVEPDAV 761
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T + + C + +H I + D + + N+L+TMYS+ G L+ + ++F+++
Sbjct: 762 TMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKI 821
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K++VSW A++S Y + G++ +A+ + EM++ G+ + V+ S S+CG + G
Sbjct: 822 AKKNAVSWTAMISSYNR-GEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREG 880
Query: 179 KQIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
K +HG +I+ + S+ L+ Y++C GD + + DRN++ W + IS+
Sbjct: 881 KSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAH 940
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF++M + P+ T +I A LV+ G+ IHG I+T+ +S+ V
Sbjct: 941 RGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTD-VSDEFV 999
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N +I MY++ + + VFD++ R I++WN+++ G++QNG SL A+ F +
Sbjct: 1000 QNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCL 1059
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ N TF +V+ A + SL+ G+ H +I G+ D +AL+DMY K G + +
Sbjct: 1060 EINKVTFLAVIQACSSIG--SLEKGRWVHHKLIVCGI-KDLFTDTALIDMYAKCGDLNTA 1116
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VF +S +W+++I+A HG S ++ F +M G +P+ + F++VL+ CG +
Sbjct: 1117 ETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 1176
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + +G++ F+ ++K + + P+ +H++C +D+L R G L+EA + ++P SV S
Sbjct: 1177 GSVEEGKYYFN-LMKLFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 1235
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
L+ CRIH +++ + I + + + +G Y L+SN+YAE+G+WE +R MKS +
Sbjct: 1236 LVNGCRIHQKMDIIKAIKNDISDIVTDDTGYYTLLSNIYAEEGEWEEFRRMRSAMKSLNL 1295
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+K G+S ++ + F +G+ T ++EEIY
Sbjct: 1296 KKVPGYSAIEID--KKVFRFGAGEETCFQTEEIY 1327
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 143/557 (25%), Positives = 269/557 (48%), Gaps = 32/557 (5%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDAVTY 60
Y G D + +F PD + ++ D A+ R+ +
Sbjct: 602 YAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSEKTQISKFVF 661
Query: 61 STALSFCL-DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ L C E G ++H I+K G+D + + +L+ MY + G L +A +VFD MP
Sbjct: 662 PSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMP 721
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D V+W+ ++S ++ + ++A+ M+ G+ D V+ S C L + +
Sbjct: 722 VRDLVAWSTLVSSCLENCEV-LKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 780
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNR-- 236
+HG + + ++ N L++ YSKC + K+F ++ +N +SWT MI S NR
Sbjct: 781 SVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGE 840
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP---S 291
E A+ F EM G+ PN VT ++ + + L++EG+ +HG I+ +P S
Sbjct: 841 FSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRREL--DPNYES 898
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
+ L+ +YA + D E + + R I+ WN+ IS YA G+ + A+ F ++
Sbjct: 899 LSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWR 958
Query: 351 SKPNAYTFGSVLNAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP+++T S+ + A E+ L + G++ H H+I+ + SD V ++++DMY K G +
Sbjct: 959 IKPDSFTLASI---ISACENTGLVRLGKQIHGHVIRTDV-SDEFVQNSVIDMYSKSGFVN 1014
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+ VF++ + +S W +++ +++G+ +N F M + + + +TFL+V+ C
Sbjct: 1015 LACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACS 1074
Query: 470 RNGMIHKGRHLFDSM----LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
G + KGR + + +KD + + ++DM + G L AE + +
Sbjct: 1075 SIGSLEKGRWVHHKLIVCGIKDLFTD------TALIDMYAKCGDLNTAETVFRAMSNRSI 1128
Query: 526 LSVLQSLLGACRIHGNV 542
+S S++ A +HG +
Sbjct: 1129 VS-WSSMINAYGMHGRI 1144
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 136/537 (25%), Positives = 254/537 (47%), Gaps = 34/537 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+ MY K G + IF + + VSW ++S + E S+ AL M G+ +
Sbjct: 802 LTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNL 861
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEV-YVGNALITMYSRWGRLVEARRVFD 116
VT + LS C + G +H ++ LD + AL+ +Y+ GRL + +
Sbjct: 862 VTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILH 921
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +++ V WN+ +S Y G +EA+ +M+ ++ D + S SAC + +
Sbjct: 922 VVGDRNIVLWNSHISLYAHRG-MVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVR 980
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
LGKQIHG I+ V N ++ YSK A VF ++ R++++W +M+
Sbjct: 981 LGKQIHGHVIRTDVSDEF-VQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFS 1039
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHG---LCIKTNFL 287
+ N +A++LF M + N VTF+ +I A SIG+L K GR +H +C +
Sbjct: 1040 QNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEK-GRWVHHKLIVCGIKDLF 1098
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
++ LI MYA+ + +E VF +S R I+SW+++I+ Y +G +A+ F +
Sbjct: 1099 TD----TALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQM 1154
Query: 348 IKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++ +KPN F +VL+A G + S++ G+ + + G+ + + +D+ + G
Sbjct: 1155 VESGTKPNEVVFMNVLSACGHSG--SVEEGKYYFNLMKLFGVSPNSEHFACFIDLLSRSG 1212
Query: 407 SIFESQRVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMEN--KGVRPDSITFLS 463
+ E+ R E ++ + W ++++ H M+ K ++N + D + +
Sbjct: 1213 DLKEAYRTIKEMPFLADASVWGSLVNGCRIHQK----MDIIKAIKNDISDIVTDDTGYYT 1268
Query: 464 VLT-VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
+L+ + G + R + +M K +++ P + + +D +V R EE Q
Sbjct: 1269 LLSNIYAEEGEWEEFRRMRSAM-KSLNLKKVPGYSAIEID--KKVFRFGAGEETCFQ 1322
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 145/338 (42%), Gaps = 51/338 (15%)
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
L + +P LI YA S S VF+ + + LI L A
Sbjct: 582 LLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDA 641
Query: 340 AVQAFFGVIKE-SKPNAYTFGSVLNA-VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A+ + ++ E ++ + + F SVL A G+ E +S+ G++ H IIK G+D D ++ ++
Sbjct: 642 AIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSV--GRKVHGRIIKSGVDDDAVIETS 699
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
LL MYG+ G++ ++++VF+ + AW+ ++S+ + + + FK M + GV PD
Sbjct: 700 LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPD 759
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLK---DYHIEPSPDHYSC--MVDMLGRVGRLEE 512
++T +SV+ C G + R + + + D+ D C ++ M + G L
Sbjct: 760 AVTMISVVEGCAELGCLRIARSVHGQITRKMFDF------DETLCNSLLTMYSKCGDLLS 813
Query: 513 AEELVGQIPGG----------------------------------PGLSVLQSLLGACRI 538
+E++ +I P L L S+L +C +
Sbjct: 814 SEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGL 873
Query: 539 HGNVEMGERIADALMKME--PAGSGSYVLMSNLYAEKG 574
+G + G+ + ++ E P + LYAE G
Sbjct: 874 NGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECG 911
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 191/570 (33%), Positives = 316/570 (55%), Gaps = 22/570 (3%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
++H+L++ G+ LI Y+R G + AR+VFD+ P +WNA++ Y++ G
Sbjct: 25 KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
EA+ M +G+R D ++T AC +L G++ ++ GYG V VG
Sbjct: 85 AM-FEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVG 143
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVC 252
+++ Y+KC +A +VF +M R+++ WTTMI+ +AV ++++M V
Sbjct: 144 AAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVE 203
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
+ V +GLI A + K G IHG I+ + + + V L+ MYA+ ++ + V
Sbjct: 204 GDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCV 263
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGVIKESKPNAYTFGSVLNAVGA 367
F + + +ISW+ALISG+AQNG + A+Q FG KP++ + SVL +
Sbjct: 264 FRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGY----KPDSVSLVSVL--LAC 317
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
++ LK G+ H +I++ L D + +A++DMY K GS+ ++ VF++ + +W
Sbjct: 318 SQVGFLKLGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWN 376
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
AII++ HG E ++ F +M V+PD TF S+L+ +G++ KGR+ F M+ +
Sbjct: 377 AIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNE 436
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGER 547
Y I+PS HY+CMVD+L R GR+EEA+EL+ + PG+++ +LL C HG +GE
Sbjct: 437 YKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEM 496
Query: 548 IADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG 607
A ++++ P G Y L+SN +A W+ VA +RK MK G++K G+S V +++G
Sbjct: 497 AAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYS---VMEVNG 553
Query: 608 -LHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
LH F D +H + EEI ++ L EMK
Sbjct: 554 KLHAFLMEDKSHHQYEEIMQVLGKLDYEMK 583
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 218/447 (48%), Gaps = 15/447 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y + G + A +F+ + +WN ++ + + +ALS RM GV D+ TY
Sbjct: 49 YARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTY 108
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ L C G + V G +V+VG A++ +Y++ G++ EA RVFD+M
Sbjct: 109 TVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGR 168
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D V W +++G Q+G EA+ +M +K + D V AC + ++G
Sbjct: 169 RDLVCWTTMITGLAQNGQ-AREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLS 227
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE--- 237
IHG I+ V V L+ Y+K A+ VFRRM +NVISW+ +IS +
Sbjct: 228 IHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGF 287
Query: 238 --DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
+A+ L +M+ G P+ V+ + ++ A S +K G+ +HG ++ S
Sbjct: 288 AGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVS-STA 346
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
+I MY++ S+ + VFD++S R+ ISWNA+I+ Y +G A+ F + + + KP+
Sbjct: 347 VIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPD 406
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSIFESQR 413
TF S+L+A + + + G+ S ++ + + + ++D+ + G + E+Q
Sbjct: 407 HATFASLLSAFSHSGLV--EKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQE 464
Query: 414 VFNETQEKSEFA-WTAIISALARHGDY 439
+ + A W A++S HG +
Sbjct: 465 LIESMITEPGIAIWVALLSGCLNHGKF 491
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 190/373 (50%), Gaps = 16/373 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+N+Y K G+ D+A+ +F+ + D+V W T+++G ++ +A+ +M+ V D
Sbjct: 147 LNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDG 206
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V + C GL +H +++ + +V V +L+ MY++ G L A VF
Sbjct: 207 VVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRR 266
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ +SW+A++SG+ Q+G G A+ +++M G + D VS S AC L+L
Sbjct: 267 MLYKNVISWSALISGFAQNGFAG-NALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKL 325
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK +HG ++ + VS ++ YSKC A VF ++ R+ ISW +I+
Sbjct: 326 GKSVHGYIVRRLHFDCVS-STAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGI 384
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E+A+SLF +MR V P+ TF L+ A S LV++GR + + + +PS
Sbjct: 385 HGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMV-NEYKIQPSE 443
Query: 293 CN--CLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNGLSLAAVQAFFGVIK 349
+ C++ + +R +++++++ + + I+ W AL+SG +G L A V++
Sbjct: 444 KHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLE 503
Query: 350 --ESKPNAYTFGS 360
P Y+ S
Sbjct: 504 LNPDDPGIYSLVS 516
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 201/673 (29%), Positives = 348/673 (51%), Gaps = 53/673 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTY 60
YC S Q A +F + ++VSW ++SG+ E A +M+ G++ D +
Sbjct: 168 YCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNF 227
Query: 61 STALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVE-ARRVFDEM 118
++ALS + G L L+ L L +K G + +V +G A++ +YSR +++ A + F+ M
Sbjct: 228 ASALS-AVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM 286
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
++ +W+ +++ + G ++A +A+ E + + + CG + +
Sbjct: 287 IERNEYTWSTMIAALSHGGR--IDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARIL 344
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+ I + + N L++ Y + + +A ++F +M RN ISW MI+
Sbjct: 345 FEQIPEPIVVSW-------NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQN 397
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E+A+ L +E+ G+ P+ + + A S ++ G +H L +K C
Sbjct: 398 GRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFAC 457
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
N LITMY + +M+ + +VF + ++I+SWN+ ++ QN L A F ++
Sbjct: 458 NALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDV 517
Query: 354 N------AYTFGSVLN-AVGAAEDISLKH-----------------------GQRCHSHI 383
+ AY N A+GA + + +H GQ+ H+
Sbjct: 518 SWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVA 577
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
IK+G+DS+ IV +AL+ MY K G +S+R+F+ +E+ F W II+ A+HG +
Sbjct: 578 IKLGMDSELIVANALISMYFKCGCA-DSRRIFDLMEERDIFTWNTIITGYAQHGLGREAI 636
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
++ ME+ GV P+ +TF+ +L C G++ +G F SM +DY + P P+HY+CMVD+
Sbjct: 637 KMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDL 696
Query: 504 LGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSY 563
LGR G ++ AE+ + +P P + +LLGAC+IH N E+G+R A+ L ++EP+ +G+Y
Sbjct: 697 LGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNY 756
Query: 564 VLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEE 623
V++SN+Y+ G W VA +RK MK +GV KE G SW + D +H F +GD H + EE
Sbjct: 757 VMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIK--DKMHSFVTGDKQHEQIEE 814
Query: 624 IYRMAECLGSEMK 636
I E L + +K
Sbjct: 815 IVATLEELYTLLK 827
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 247/507 (48%), Gaps = 39/507 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++ YC +G D A +++ ++ ++ + +LSG+ + L R G++
Sbjct: 72 ISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLE--ARRVFDGMLERNTVA 129
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
A+ C G + + + +V N+++T Y ++V+AR +F++MP
Sbjct: 130 WNAMISCYVQNG---DITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPE 186
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
++ VSW ++SGY + ++G +A +M R+GL D +F SA SA NL++ +
Sbjct: 187 RNLVSWTVMISGYGRIENHG-KAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLES 245
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSK-CEVTGDANKVFRRMHDRNVISWTTMISM----N 235
+ +++K G+ V +G +++ YS+ V A K F M +RN +W+TMI+
Sbjct: 246 LRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGG 305
Query: 236 RED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC- 293
R D A+++++ + + GL + + R++ + EP V
Sbjct: 306 RIDAAIAVYERDPVKSIACRTALITGLAQC----GRIDDARILF------EQIPEPIVVS 355
Query: 294 -NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N LIT Y + + +++++FD++ R ISW +I+GYAQNG S A+ G+++E
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEAL----GLLQELH 411
Query: 353 -----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
P+ + S+ A + ++L+ G + HS +KVG + +AL+ MYGK +
Sbjct: 412 RSGMLPSLSSLTSIFFA--CSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRN 469
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +++VF+ K +W + ++AL ++ + N F M ++ D +++ ++++
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISA 525
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSP 494
++ F +M ++ + SP
Sbjct: 526 YAHAEQSNEAMGAFKTMFCEHELPNSP 552
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 224/525 (42%), Gaps = 104/525 (19%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFC 67
G+ +A +F+ + DI++WN+++S + + + A R ++DA++
Sbjct: 48 GRVGEAREVFDAMPRRDIIAWNSMISAY--CHNGMPDAAR-----DLYDAIS-------- 92
Query: 68 LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN 127
+ G L++ Y R GR++EARRVFD M +++V+WN
Sbjct: 93 ---------------------GGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWN 131
Query: 128 AILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
A++S Y Q+GD I M R+ F + S
Sbjct: 132 AMISCYVQNGD---------ITMARR-------LFDAMPS-------------------- 155
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSL 242
VS N +++ Y DA +F +M +RN++SWT MIS N A +
Sbjct: 156 ----RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDI 211
Query: 243 FKEMRLDGVCPNDVTFIGLIHAIS-IGNL-VKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
F +M +G+ P+ F + A+ +GNL V E + L +KT F + + ++ +Y
Sbjct: 212 FCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRV--LALKTGFERDVVIGTAILNVY 269
Query: 301 ARFESMQDSE-KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFG 359
+R S+ D+ K F+ + R +W+ +I+ + G AA+ + +S
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI 329
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS--ALLDMYGKRGSIFESQRVFNE 417
+ L G +D + Q +PIV S AL+ Y + G + E++ +F++
Sbjct: 330 TGLAQCGRIDDARILFEQ-----------IPEPIVVSWNALITGYMQNGMVNEAKELFDK 378
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
++ +W +I+ A++G E + +E+ G+ P + S+ C + G
Sbjct: 379 MPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETG 438
Query: 478 RHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQI 520
+ +K + + ++C ++ M G+ +E A ++ ++
Sbjct: 439 TQVHSLAVK---VGCQFNSFACNALITMYGKCRNMEYARQVFSRM 480
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 52/263 (19%)
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
E S C+ I R + ++ +VFD + R+II+WN++IS Y NG+ AA + +
Sbjct: 33 EVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAI- 91
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S N T G+ LL YG+ G +
Sbjct: 92 --SGGNMRT-------------------------------------GAILLSGYGRLGRV 112
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E++RVF+ E++ AW A+IS ++GD F M ++ D ++ S+LT
Sbjct: 113 LEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR----DVSSWNSMLTGY 168
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG---PG 525
+ + R+LF+ M E + ++ M+ GR+ +A ++ ++ P
Sbjct: 169 CHSLQMVDARNLFEKM-----PERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPD 223
Query: 526 LSVLQSLLGACRIHGNVEMGERI 548
S S L A + GN+++ E +
Sbjct: 224 QSNFASALSAVKGLGNLDVLESL 246
>gi|449522624|ref|XP_004168326.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Cucumis sativus]
Length = 616
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 189/572 (33%), Positives = 309/572 (54%), Gaps = 22/572 (3%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LHSL+VK GL +E+ V N L+ +Y + L AR +FDEM ++ VSWN ++ G DG
Sbjct: 38 LHSLVVKLGLINELSVQNKLLRVYVKCRDLDSARTLFDEMARRNVVSWNTVICGLV-DGG 96
Query: 139 YGVE------AILALIEMMRKGL-RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
YG E +I + M GL D ++F +C ++E G+Q+H +K+G+
Sbjct: 97 YGGEFKMRQHSIFLYFKKMLMGLVDPDGITFNGLFRSCVVLNDVESGRQLHSFVMKIGFD 156
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI------SMNREDAVSLFKE 245
VG+ ++ Y+KC + DA F + R+++ W M+ S++RE A+ +F+
Sbjct: 157 LDCFVGSAVVDFYAKCGLYEDARLAFSCILYRDLVLWNVMLYCCVFNSLSRE-AIEVFRL 215
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
M+L+G +D TF L+ + G+ +H L IK +F + V + L+ +YA+ ++
Sbjct: 216 MQLEGFKGDDFTFSSLLSLCKYKGSGELGKQLHCLLIKQSFDLDILVASSLVNVYAKNDN 275
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNA 364
+ D+ KVFDE+ R +SW +I GY Q+ AV+ F ++ K+ P+ TF S+L++
Sbjct: 276 LYDARKVFDEMPTRNSVSWTTMIVGYGQHEYGKEAVKLFRRMLRKDYCPDELTFASLLSS 335
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
G S + HS +IK+G ++ + + L+ Y K G I + + F E
Sbjct: 336 CGFTSGAS--ELMQVHSCLIKLGFEAFLSINNGLIYAYSKCGIIAAALQCFRLVAEPDLV 393
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
WT+II LA G + + F +M + G+RPD I FL VL+ C G + G H F+ M
Sbjct: 394 TWTSIICGLALCGLEKDAVKLFDKMLSYGIRPDKIAFLGVLSACSHGGFVSMGLHYFNLM 453
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
Y + P +H +C++D+LGR G L++A +L+ +P G L++ + ACR HGN+ +
Sbjct: 454 TNQYQLVPDSEHLTCLIDLLGRAGSLDQAFDLLKSMPKEAGPDALRAFIRACRTHGNLRL 513
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
+R + EP +Y L+SN+YA +G W VA +RK + + +K G SW ++
Sbjct: 514 AKRAME--FASEPDEPVNYSLVSNMYASEGRWSDVARMRKLINDRCEQKTPGLSWVEIAG 571
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ H F SGD +HP+S ++Y M L + MK
Sbjct: 572 YN--HLFISGDRSHPQSLDLYAMLGLLLNTMK 601
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 222/456 (48%), Gaps = 21/456 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVF----- 55
+ +Y K D A +F+ + ++VSWNTV+ G F +R + I + F
Sbjct: 58 LRVYVKCRDLDSARTLFDEMARRNVVSWNTVICGLVDGGYGGEFKMRQHSIFLYFKKMLM 117
Query: 56 -----DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
D +T++ C+ G QLHS ++K G D + +VG+A++ Y++ G +
Sbjct: 118 GLVDPDGITFNGLFRSCVVLNDVESGRQLHSFVMKIGFDLDCFVGSAVVDFYAKCGLYED 177
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
AR F + +D V WN +L + EAI M +G + D +F+S S C
Sbjct: 178 ARLAFSCILYRDLVLWNVMLYCCVFNS-LSREAIEVFRLMQLEGFKGDDFTFSSLLSLCK 236
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
++ + ELGKQ+H + IK + + V + L++ Y+K + DA KVF M RN +SWTT
Sbjct: 237 YKGSGELGKQLHCLLIKQSFDLDILVASSLVNVYAKNDNLYDARKVFDEMPTRNSVSWTT 296
Query: 231 MI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MI ++AV LF+ M CP+++TF L+ + + E +H IK
Sbjct: 297 MIVGYGQHEYGKEAVKLFRRMLRKDYCPDELTFASLLSSCGFTSGASELMQVHSCLIKLG 356
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F + S+ N LI Y++ + + + F ++ ++++W ++I G A GL AV+ F
Sbjct: 357 FEAFLSINNGLIYAYSKCGIIAAALQCFRLVAEPDLVTWTSIICGLALCGLEKDAVKLFD 416
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLK-HGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
++ +P+ F VL+A +S+ H ++ ++ DS+ + + L+D+ G
Sbjct: 417 KMLSYGIRPDKIAFLGVLSACSHGGFVSMGLHYFNLMTNQYQLVPDSEHL--TCLIDLLG 474
Query: 404 KRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGD 438
+ GS+ ++ + +E A A I A HG+
Sbjct: 475 RAGSLDQAFDLLKSMPKEAGPDALRAFIRACRTHGN 510
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 142/309 (45%), Gaps = 27/309 (8%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
++ A + N + ++H L +K ++E SV N L+ +Y + + + +FDE++ R
Sbjct: 22 VLKAAAPVNSIPRDTLLHSLVVKLGLINELSVQNKLLRVYVKCRDLDSARTLFDEMARRN 81
Query: 321 IISWNALISGYA-----------QNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAE 369
++SWN +I G Q+ + L + G++ P+ TF + +
Sbjct: 82 VVSWNTVICGLVDGGYGGEFKMRQHSIFLYFKKMLMGLV---DPDGITFNGLFRSCVVLN 138
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
D+ + G++ HS ++K+G D D VGSA++D Y K G +++ F+ + W +
Sbjct: 139 DV--ESGRQLHSFVMKIGFDLDCFVGSAVVDFYAKCGLYEDARLAFSCILYRDLVLWNVM 196
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK--- 486
+ + + F+ M+ +G + D TF S+L++C G G+ L ++K
Sbjct: 197 LYCCVFNSLSREAIEVFRLMQLEGFKGDDFTFSSLLSLCKYKGSGELGKQLHCLLIKQSF 256
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
D I + S +V++ + L +A ++ ++P +S ++G +G E G+
Sbjct: 257 DLDILVA----SSLVNVYAKNDNLYDARKVFDEMPTRNSVSWTTMIVG----YGQHEYGK 308
Query: 547 RIADALMKM 555
+M
Sbjct: 309 EAVKLFRRM 317
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 203/637 (31%), Positives = 337/637 (52%), Gaps = 24/637 (3%)
Query: 28 WNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIV 84
WN+ + G + AL+ ++ L G+ + T+ C +H+ +V
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 85 KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAI 144
K S++YV A++ MY + G++ +A +FD+MP ++ SWNA++ G++Q G ++ +
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGS--LDRV 137
Query: 145 LALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
L MR G R D + A K+L K +H + I+ G SV N ++
Sbjct: 138 FNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAA 197
Query: 204 YSKCEVTGDANKVFRRMHD--RNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDV 256
YSKC A VF + R+ +SW ++I+ DAV +K + DG P+
Sbjct: 198 YSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDAS 257
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T I L+ + + G +IHG + S+ S+ N LI+MY+R + + +FD +
Sbjct: 258 TIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGM 317
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLK 374
S R +SW A+ISGY++ G A+ F ++E+ KP+ T S+++ G + L
Sbjct: 318 SIRTCVSWTAMISGYSEVGRVDDAL-VLFNAMEETGEKPDIVTVLSLISGCGKTGALGLG 376
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
H ++ + + L D +V +AL+DMY K GS+ +++ +F ++ +WTA+I+A A
Sbjct: 377 HWIDNYASLHE--LKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACA 434
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
+G++ ++ F + G+ P++ITFL+VL C G + KGR F M + Y I P
Sbjct: 435 LNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGL 494
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
DHYSCM+D+LGR G+L EA E++ +P P + +LLGAC+IH N+E+GE ++ L +
Sbjct: 495 DHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFE 554
Query: 555 MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL-HGFSS 613
++P + S+V M+N+YA G W+ VA +RK M+S +RK G S V ++G+ H F
Sbjct: 555 LQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKS---VVQVNGMSHVFFV 611
Query: 614 GDNTHPRSEEIYRMAECLGSEMKY--LNSKRERAIAL 648
D +H S IY L +MK +S +R + L
Sbjct: 612 EDRSHHDSLLIYEALGNLAMQMKQKEFSSHAQRWVEL 648
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 219/458 (47%), Gaps = 26/458 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G+ D A +F+ + +I SWN ++ GF + D + + M L+G DA
Sbjct: 94 VDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDA 153
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD- 116
T + + F +H++ ++ GLD++ V N I YS+ G L A+ VF
Sbjct: 154 ATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHG 213
Query: 117 -EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ + SVSWN++++ Y G Y V+A+ + ++ G + D + S S+C + L
Sbjct: 214 IQKTARSSVSWNSLIACYAHFGKY-VDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEAL 272
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G IHG ++G + +S+ N L+S YS+C A +F M R +SWT MIS
Sbjct: 273 IYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGY 332
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E DA+ LF M G P+ VT + LI + G I +
Sbjct: 333 SEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDV 392
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
VCN LI MYA+ S+ D+ ++F L R ++SW A+I+ A NG A+ F ++ E
Sbjct: 393 VVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALD-LFSLLSE 451
Query: 351 S--KPNAYTFGSVLNAVGAAEDISLKHGQRC-----HSHIIKVGLDSDPIVGSALLDMYG 403
S +PN TF +VL A L+ G+ C + I GLD S ++D+ G
Sbjct: 452 SGIEPNNITFLAVLQA--CCHGGYLEKGRECFMMMTERYGINPGLDHY----SCMIDLLG 505
Query: 404 KRGSIFESQRVFNETQEKS-EFAWTAIISALARHGDYE 440
++G + E+ V + K E W A++ A H + E
Sbjct: 506 RKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNME 543
>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
Length = 591
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 198/589 (33%), Positives = 319/589 (54%), Gaps = 33/589 (5%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVK----FGLDSE-------VYVGNALITMYSRWGRL 108
+S L+ C G LH+ +VK F L + + NAL++MY+R GR
Sbjct: 14 FSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYARCGRR 73
Query: 109 VEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAAS 167
+A RVFDEM +D+VSWN++++ GD A+ M+R R D +FT+ S
Sbjct: 74 EDAARVFDEMRVRDAVSWNSLIAASRGAGD----ALALFRRMLRSDARACDRATFTTVLS 129
Query: 168 ACGHE--KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
C +L +HG+ + G+ V VGN L++ Y +C A +VF M ++NV
Sbjct: 130 ECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNV 189
Query: 226 ISWTTMIS-MNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
I+WT MIS M R +++ SLF +M + V N+ T+ + A + +EG+ +HGL
Sbjct: 190 ITWTAMISGMARAELYKESFSLFGQM-IRTVDANNATYSCTLLACARSLAAREGQQVHGL 248
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI--ISWNALISGYAQNGLSL 338
+K F ++ V + L+ +Y++ M+D+ VF SCRE + ++ G+AQNGL
Sbjct: 249 VVKAGFEADLHVESGLMDVYSKCGLMEDALTVFR--SCREPDEVFLTVILVGFAQNGLEE 306
Query: 339 AAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A + F ++ ++ + T +VL A GA+ +L G++ H+ +IK + V +
Sbjct: 307 KAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFAL--GKQIHALVIKRCFGVNTYVCNG 364
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L++MY K G + ES +VF+E K+ +W +II+A ARHG V F+ M+ G +P
Sbjct: 365 LVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPT 424
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
+TFLS+L C G KG + +SM Y + P +HY+C+VDMLGR G L++A+ +
Sbjct: 425 DVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFI 484
Query: 518 GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
P + Q+L+GAC HGN E+G+ A+ L+ ++P+ + +YVL+SN+Y+ +G W+
Sbjct: 485 EDGPFTDSALLWQALMGACSFHGNSEVGKHAAEKLLLLDPSCTAAYVLLSNIYSSEGRWD 544
Query: 578 MVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
A + K M G+RK+ G SW ++ +H F +HP S R
Sbjct: 545 DRAKVMKRMSEMGLRKDTGKSWIELE--KEVHSFVVRSTSHPNSAAAVR 591
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 224/453 (49%), Gaps = 19/453 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRM-NLIGVVFDAVT 59
++MY + G+ + A +F+ + D VSWN++++ + DAL+ RM D T
Sbjct: 64 VSMYARCGRREDAARVFDEMRVRDAVSWNSLIAASRGAGDALALFRRMLRSDARACDRAT 123
Query: 60 YSTALSFCLD--HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++T LS C +H L+V G ++EV VGNAL+T Y G A RVF
Sbjct: 124 FTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHG 183
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ ++W A++SG + Y + +L M + + ++ +++ AC
Sbjct: 184 MAEKNVITWTAMISGMARAELY--KESFSLFGQMIRTVDANNATYSCTLLACARSLAARE 241
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
G+Q+HG+ +K G+ + V + LM YSKC + DA VFR + + + T ++ +
Sbjct: 242 GQQVHGLVVKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQ 301
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N E A LF EM G ++ T ++ A G+ IH L IK F V
Sbjct: 302 NGLEEKAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYV 361
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-S 351
CN L+ MY++ +++S +VFDE+ + +SWN++I+ +A++G Q F + + +
Sbjct: 362 CNGLVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGA 421
Query: 352 KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
KP TF S+L+A VG+A+ K + +S + G+ + ++DM G+ G +
Sbjct: 422 KPTDVTFLSLLHACSHVGSAK----KGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLL 477
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+++ + S W A++ A + HG+ E
Sbjct: 478 DDAKSFIEDGPFTDSALLWQALMGACSFHGNSE 510
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 193/403 (47%), Gaps = 24/403 (5%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIK----------MGYGTHVSVG-NVLMSTYS 205
L++ F+ ++CG E +L LG +H +K + HV V N L+S Y+
Sbjct: 9 LNYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYA 68
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNR--EDAVSLFKEM-RLDGVCPNDVTFIGLI 262
+C DA +VF M R+ +SW ++I+ +R DA++LF+ M R D + TF ++
Sbjct: 69 RCGRREDAARVFDEMRVRDAVSWNSLIAASRGAGDALALFRRMLRSDARACDRATFTTVL 128
Query: 263 HAISIGNL--VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
+ + M+HGL + F +E V N L+T Y S +E+VF ++ +
Sbjct: 129 SECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKN 188
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
+I+W A+ISG A+ L + F +I+ N T+ L + A ++ + GQ+ H
Sbjct: 189 VITWTAMISGMARAELYKESFSLFGQMIRTVDANNATYSCTL--LACARSLAAREGQQVH 246
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
++K G ++D V S L+D+Y K G + ++ VF +E E T I+ A++G E
Sbjct: 247 GLVVKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEE 306
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC- 499
F EM G D T +VL G + G+ + ++K + Y C
Sbjct: 307 KAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCF---GVNTYVCN 363
Query: 500 -MVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+V+M + G L E+ ++ ++P +S S++ A HG+
Sbjct: 364 GLVNMYSKCGELRESVQVFDEMPSKNSVS-WNSIIAAFARHGH 405
>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Vitis vinifera]
Length = 882
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 202/677 (29%), Positives = 344/677 (50%), Gaps = 52/677 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y K G A +F L+ P++VS+ ++SGF KS+ A+ RM G+ + ++
Sbjct: 115 YLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSF 174
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
L+ C+ G QLH++++K G + +V NAL+ +Y + G L ++FDEMP+
Sbjct: 175 VAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPH 234
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNLELG 178
+D SWN ++S ++ Y E L MR+ G R+DH + ++ A ++ +G
Sbjct: 235 RDIASWNTVISSVVKEMMY--ERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASM-VG 291
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
++IH IK+G+ +++SV N L+ Y+KC +F +M R+VI+WT MI+ E
Sbjct: 292 REIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEF 351
Query: 238 -----------------------------------DAVSLFKEMRLDGVCPNDVTFIGLI 262
A++ F M +GV D T G++
Sbjct: 352 GLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVL 411
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI- 321
+A + K + IHG +K F S + L+ M R M D++K+F + S +
Sbjct: 412 NACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSG 471
Query: 322 -ISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKH-GQRC 379
I W ++I GYA+N A+ F E S +G ++ G++
Sbjct: 472 SIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVAST-AVLGVCGTLAFHEMGKQI 530
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H H +K G SD VG++++ MY K ++ ++ +VFN +W +I+ H
Sbjct: 531 HCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQG 590
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVC--GRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
+ ++ + +ME G++PD++TF+ +++ + ++ R LF SM YHI+P+ +HY
Sbjct: 591 DEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHY 650
Query: 498 SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
+ +V +LG G LEEAEE++ ++P P SV ++LL ACRIH N +G+R A L+ M+P
Sbjct: 651 TSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKP 710
Query: 558 AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNT 617
+Y+L+SNLY+ G W ++R+ M+ KG RK G SW + + +H F + D +
Sbjct: 711 LDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSW--IIHENKVHSFYARDKS 768
Query: 618 HPRSEEIYRMAECLGSE 634
HP++++I+ E L E
Sbjct: 769 HPQAKDIHSGLELLIME 785
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 236/490 (48%), Gaps = 60/490 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLI-GVVFD 56
M +Y K G D L +F+ + + DI SWNTV+S K + A M I G D
Sbjct: 213 MGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRID 272
Query: 57 AVTYSTALSFCLDHEGF--LFGLQLHSLIVKFGLDSEVYVGNALITMYSR---------- 104
T ST L + G + G ++H+ ++K G +S + V NALI Y++
Sbjct: 273 HFTLSTIL---VAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVAL 329
Query: 105 -----------WGRLVEAR----------RVFDEMPNKDSVSWNAILSGYTQDGDYGVEA 143
W ++ A VFD+MP ++S+S+NAILSG+ Q+G+ G +A
Sbjct: 330 FEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGE-GSKA 388
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
+ M+ +G+ L + T +ACG ++ KQIHG +K G+G++ + L+
Sbjct: 389 LAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDM 448
Query: 204 YSKCEVTGDANKV--FRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPND- 255
++C DA K+ I WT+MI + E+A+SLF + +L+G D
Sbjct: 449 CTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDK 508
Query: 256 ---VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
+G+ ++ + G+ IH +K+ FLS+ V N +ITMY++ +M D+ KV
Sbjct: 509 VASTAVLGVCGTLAFHEM---GKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKV 565
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
F+ + +I+SWN LI+G+ + A+ + + K KP+ TF +++A
Sbjct: 566 FNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSN 625
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIFESQRVFNETQEKSEFA-WTA 428
+ + +R +K DP V ++L+ + G G + E++ + N+ + E + W A
Sbjct: 626 LVDNCRRLFLS-MKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRA 684
Query: 429 IISALARHGD 438
++ A H +
Sbjct: 685 LLDACRIHSN 694
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 211/443 (47%), Gaps = 47/443 (10%)
Query: 86 FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
F L ++++ NALI Y + G + A +VF + + VS+ A++SG+ + + +A+
Sbjct: 99 FKLAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAK-SNRERQAME 157
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
M G+ L+ SF + + C +LELG Q+H + IKMG+ + V N LM Y
Sbjct: 158 IFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYG 217
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEM-RLDGVCPNDVTFI 259
KC ++F M R++ SW T+IS M E A LF++M R+DG + T
Sbjct: 218 KCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLS 277
Query: 260 G-LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR----------FESMQD 308
L+ A + ++V GR IH IK F S SV N LI Y + FE M+
Sbjct: 278 TILVAARGLASMV--GREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRV 335
Query: 309 SE---------------------KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ +VFD++ R IS+NA++SG+ QNG A+ F +
Sbjct: 336 RDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRM 395
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++E + +T VLNA G + K ++ H I+K G S+ + +ALLDM + G
Sbjct: 396 VEEGVELTDFTLTGVLNACGLL--MEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCG 453
Query: 407 SIFESQRV--FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR-PDSITFLS 463
+ ++Q++ + WT++I AR+ E ++ F + + +G D + +
Sbjct: 454 RMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTA 513
Query: 464 VLTVCGRNGMIHKGRHLFDSMLK 486
VL VCG G+ + LK
Sbjct: 514 VLGVCGTLAFHEMGKQIHCHALK 536
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+ I K L D + +AL+ Y K G + + +VF + ++TA+IS A+
Sbjct: 95 HASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRE 152
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK----DYHIEPSPD 495
M F M + G+ + +F+++LTVC R + G L ++K +Y +
Sbjct: 153 RQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNA- 211
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIP 521
++ + G+ G L+ +L ++P
Sbjct: 212 ----LMGLYGKCGYLDSVLQLFDEMP 233
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 190/638 (29%), Positives = 313/638 (49%), Gaps = 80/638 (12%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ TY + L C + F G ++HS+I + + +G L++ Y+ G L E RRV
Sbjct: 97 LETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRV 156
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-------------------------- 148
FD M K+ WN ++S Y + GD+ L I
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDV 216
Query: 149 ------------------------EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
+MM G+ +D + S C + L LGK +H +
Sbjct: 217 ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----A 239
+IK + ++ N L+ YSKC A +VF +M +RNV+SWT+MI+ D A
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGA 336
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ L ++M +GV + V ++HA + + G+ +H N S VCN L+ M
Sbjct: 337 IKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDM 396
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFG 359
YA+ SM+ + VF + ++IISWN +I E KP++ T
Sbjct: 397 YAKCGSMEAANSVFSTMVVKDIISWNTMIG--------------------ELKPDSRTMA 436
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
VL A + +L+ G+ H +I++ G SD V +AL+D+Y K G + ++ +F+
Sbjct: 437 CVLPACASLS--ALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
K +WT +I+ HG + F EM + G+ PD ++F+S+L C +G++ +G
Sbjct: 495 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIH 539
F M D++IEP +HY+CMVD+L R G L +A E + +P P ++ +LL CR +
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNY 614
Query: 540 GNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSW 599
++E+ E++A+ + ++EP +G YVL++N+YAE WE V LR+ + +G+RK G SW
Sbjct: 615 HDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSW 674
Query: 600 ADVGDIDGLHGFSSGDN-THPRSEEIYRMAECLGSEMK 636
++ L F SG+N +HP S+ I + + + +MK
Sbjct: 675 IEIKGKVNL--FVSGNNSSHPHSKNIESLLKKMRRKMK 710
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 225/439 (51%), Gaps = 31/439 (7%)
Query: 11 DKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTYSTALSFC 67
+ A +F+ L + D++SWN+++SG+ ++ L +M +G+ D T + L C
Sbjct: 202 ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261
Query: 68 LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN 127
+ G +HSL +K + + N L+ MYS+ G L A RVF++M ++ VSW
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321
Query: 128 AILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
++++GYT+DG AI L +M ++G++LD V+ TS AC +L+ GK +H
Sbjct: 322 SMIAGYTRDGRSD-GAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEMR 247
+++ V N LM Y+KC AN VF M +++ISW TMI E++
Sbjct: 381 NNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG-----------ELK 429
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
P+ T ++ A + + ++ G+ IHG ++ + S+ V N L+ +Y + +
Sbjct: 430 -----PDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLG 484
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAV 365
+ +FD + ++++SW +I+GY +G A+ A F ++++ +P+ +F S+L A
Sbjct: 485 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAI-ATFNEMRDAGIEPDEVSFISILYA- 542
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIFESQRVFNETQEKSE 423
+ L+ G R +I+K + +P + + ++D+ + G++ ++ F ET +
Sbjct: 543 -CSHSGLLEQGWR-FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE-FMETLPIAP 599
Query: 424 FA--WTAIISALARHGDYE 440
A W A++ + D E
Sbjct: 600 DATIWGALLCGCRNYHDIE 618
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 198/415 (47%), Gaps = 38/415 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K G D AL +F + ++VSW ++++G+ +SD A+ +M GV D
Sbjct: 293 LDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDV 352
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V ++ L C G +H I ++S ++V NAL+ MY++ G + A VF
Sbjct: 353 VAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFST 412
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD +SWN ++ L+ D + AC LE
Sbjct: 413 MVVKDIISWNTMIG----------------------ELKPDSRTMACVLPACASLSALER 450
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
GK+IHG ++ GY + V N L+ Y KC V G A +F + ++++SWT MI+ M
Sbjct: 451 GKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGM 510
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +A++ F EMR G+ P++V+FI +++A S L+++G + +K +F EP +
Sbjct: 511 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKL 569
Query: 293 CN--CLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ C++ + +R ++ + + + L + W AL+ G +N + + +
Sbjct: 570 EHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCG-CRNYHDIELAEKVAERVF 628
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
E +P + VL A AE + +R I K GL +P G + +++ GK
Sbjct: 629 ELEPENTGY-YVLLANIYAEAEKWEEVKRLREKIGKQGLRKNP--GCSWIEIKGK 680
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 194/455 (42%), Gaps = 88/455 (19%)
Query: 126 WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVS 185
+NA + + Q GD +E + LI M +K L+ ++ S C K+ GK++H +
Sbjct: 69 YNAKILHFCQLGD--LENAMELICMCQKS-ELETKTYGSVLQLCAGLKSFTDGKKVHSII 125
Query: 186 IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAV 240
G ++G L+S Y+ C + +VF M +NV W M+S + ++++
Sbjct: 126 KSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI 185
Query: 241 SLFKEM---------------RLDGVCPNDV----------------------------- 256
LFK M D +C DV
Sbjct: 186 CLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYL 245
Query: 257 -------TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
T I ++ + + G+ +H L IK++F + N L+ MY++ + +
Sbjct: 246 GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGA 305
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
+VF+++ R ++SW ++I+GY ++G S A++ + KE K + S+L+A A
Sbjct: 306 LRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHA--CA 363
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
SL +G+ H +I ++S+ V +AL+DMY K GS+ + VF+ K +W
Sbjct: 364 RSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNT 423
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+I L +PDS T VL C + +G+ + +L++
Sbjct: 424 MIGEL---------------------KPDSRTMACVLPACASLSALERGKEIHGYILRNG 462
Query: 489 HIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQIP 521
+ S D + + +VD+ + G L A L IP
Sbjct: 463 Y---SSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 29/230 (12%)
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
+ G IH +KT S P +C+ + + +V D +NA I +
Sbjct: 27 QNGCFIHKPSLKTKIFS-PIFSSCIPIRISATPTRTIDHQVTD---------YNAKILHF 76
Query: 332 AQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
Q G L + ++S+ T+GSVL + S G++ HS I + D
Sbjct: 77 CQLG-DLENAMELICMCQKSELETKTYGSVLQLCAGLK--SFTDGKKVHSIIKSNSVGVD 133
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+G L+ Y G + E +RVF+ ++K+ + W ++S A+ GD++ + FK M
Sbjct: 134 GALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE 193
Query: 452 KGV---RPDS-------------ITFLSVLTVCGRNGMIHKGRHLFDSML 485
KG+ RP+S I++ S+++ NG+ +G ++ M+
Sbjct: 194 KGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMM 243
>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 757
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 198/650 (30%), Positives = 343/650 (52%), Gaps = 22/650 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
+N Y K G+ D A+ +F+++ + D VSWN ++ G + + L + + G +
Sbjct: 106 LNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNI 165
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + C GLQLH +++ GL + V N+ + MY+ + AR +FDE
Sbjct: 166 STLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYAD-VDMDCARILFDE 224
Query: 118 MPNKDSVSWNAILSGYTQ--DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
MP KD +SW+A++ GY Q + G++ ++ R + D V S AC + N+
Sbjct: 225 MPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSR--ITPDGVILVSVLKACANSVNI 282
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
+G+ +HG++I G + + V N L+ YSKC+ G A +VF M RN +SW +++S
Sbjct: 283 TMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGL 342
Query: 234 -MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+N++ +A+ L MR +G+ ++VT + + + +H I+ S
Sbjct: 343 ILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNE 402
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N LI YA+ ++ + +VF R+++ W+ +I+G+A G A+ A F + E
Sbjct: 403 IVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAI-AVFQKMNE 461
Query: 351 --SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
PNA T ++L A + + LK H I+ GL ++ VG+A++DMY K G I
Sbjct: 462 GIEVPNAVTIINLLQACSVSAE--LKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEI 519
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S++ FN+ +K+ W+ +I+A +G + +M++ ++P+++T+LSVLT C
Sbjct: 520 EASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTAC 579
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG--PGL 526
G++ G +F SM++D+ ++P +HYSCMVDML R G+L++A EL+ +P G
Sbjct: 580 SHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMELIRMMPETFRAGA 639
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
SV +LL ACR + + +GE+ ++++EP Y+L S++YA G W+ A ++
Sbjct: 640 SVWGALLSACRTYRSSTLGEKAVYQVLELEPLNLAGYLLASSMYASDGLWDNAARMKLLA 699
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ +GVR G+S V H F +GD + ++ I+ M L MK
Sbjct: 700 RERGVRAVAGYSIVHVD--SKAHKFVAGDKSCSQAGNIHHMLNQLHFCMK 747
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 241/521 (46%), Gaps = 31/521 (5%)
Query: 20 LNNPDIVSWN---TVLSGFEKSDDALSFALRMNLIGV---VFDAVTYSTALSFCLDHEGF 73
L+ ++SW LS EK + +S + G+ + D + L C + +
Sbjct: 22 LSTSRLLSWTLRIKELSSNEKWHEVISQYYEITNAGISHHLLDVTLFPPVLKAC-SYLSY 80
Query: 74 LFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGY 133
+ G LH+ ++K DS +GN+++ Y + G L A VFD M ++DSVSWN ++ G
Sbjct: 81 IDGKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGC 140
Query: 134 TQDGDYG--VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
DYG VE + I G + + AC + + G Q+HG I+ G
Sbjct: 141 L---DYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLW 197
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEM 246
SV N + Y+ ++ A +F M +++VISW+ MI + + + +F++M
Sbjct: 198 ASWSVQNSFLCMYADVDMDC-ARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKM 256
Query: 247 -RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
+ P+ V + ++ A + + GR++HGL I S+ V N LI MY++ +
Sbjct: 257 LSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKD 316
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
+ +VF E+ R +SWN+L+SG N A+ + + E + + T + L
Sbjct: 317 AGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQI 376
Query: 365 VGAAEDISLKHGQRC---HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
H C H I+ G +S+ IV ++L+D Y K I + VF+ T+ +
Sbjct: 377 CK-----YFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRR 431
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVR-PDSITFLSVLTVCGRNGMIHKGRHL 480
W+ +I+ A G + + F++M N+G+ P+++T +++L C + + +
Sbjct: 432 DVVLWSTMIAGFAHCGKPDEAIAVFQKM-NEGIEVPNAVTIINLLQACSVSAELKRSMWA 490
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ ++ + + +VDM + G +E + + QIP
Sbjct: 491 HGAAIRR-GLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIP 530
>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 353/635 (55%), Gaps = 20/635 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI----GVVFDAV 58
MY ++G A +F+ + D+V+W+T++S ++ + + ALRM GV DAV
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVK-ALRMFKCMVDDGVEPDAV 203
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T + + C + +H I + D + + N+L+TMYS+ G L+ + R+F+++
Sbjct: 204 TMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI 263
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K++VSW A++S Y + G++ +A+ + EM++ G+ + V+ S S+CG + G
Sbjct: 264 AKKNAVSWTAMISSYNR-GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREG 322
Query: 179 KQIHGVSIKMGYG-THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
K +HG +++ + S+ L+ Y++C D V R + DRN+++W ++IS+
Sbjct: 323 KSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAH 382
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
A+ LF++M + P+ T I A LV G+ IHG I+T+ +S+ V
Sbjct: 383 RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFV 441
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-FGVIKES 351
N LI MY++ S+ + VF+++ R +++WN+++ G++QNG S+ A+ F +
Sbjct: 442 QNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYL 501
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ N TF +V+ A + SL+ G+ H +I GL D +AL+DMY K G + +
Sbjct: 502 EMNEVTFLAVIQACSSIG--SLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAA 558
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VF +S +W+++I+A HG S ++ F +M G +P+ + F++VL+ CG +
Sbjct: 559 ETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + +G++ F+ ++K + + P+ +H++C +D+L R G L+EA + ++P SV S
Sbjct: 619 GSVEEGKYYFN-LMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 677
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
L+ CRIH +++ + I + L + +G Y L+SN+YAE+G+WE LR MKS +
Sbjct: 678 LVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNL 737
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
+K G+S ++ + F +G+ +++EIYR
Sbjct: 738 KKVPGYSAIEID--QKVFRFGAGEENRIQTDEIYR 770
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 250/476 (52%), Gaps = 29/476 (6%)
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
VF +V + A S E G ++H I+K G+D + + +L+ MY + G L +A +
Sbjct: 102 VFPSVLRACAGS----REHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEK 157
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VFD MP +D V+W+ ++S ++G+ V+A+ M+ G+ D V+ S C
Sbjct: 158 VFDGMPVRDLVAWSTLVSSCLENGEV-VKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI- 232
L + + +HG + + ++ N L++ YSKC + ++F ++ +N +SWT MI
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
Query: 233 SMNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
S NR E A+ F EM G+ PN VT ++ + + L++EG+ +HG ++
Sbjct: 277 SYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL-- 334
Query: 289 EP---SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+P S+ L+ +YA + D E V +S R I++WN+LIS YA G+ + A+ F
Sbjct: 335 DPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFR 394
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
++ + KP+A+T S ++A A + L G++ H H+I+ + SD V ++L+DMY K
Sbjct: 395 QMVTQRIKPDAFTLASSISACENAGLVPL--GKQIHGHVIRTDV-SDEFVQNSLIDMYSK 451
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GS+ + VFN+ + +S W +++ +++G+ ++ F M + + + +TFL+V
Sbjct: 452 SGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAV 511
Query: 465 LTVCGRNGMIHKGR----HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ C G + KG+ L S LKD + + ++DM + G L AE +
Sbjct: 512 IQACSSIGSLEKGKWVHHKLIISGLKDLFTD------TALIDMYAKCGDLNAAETV 561
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 139/530 (26%), Positives = 257/530 (48%), Gaps = 28/530 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+ MY K G + IF + + VSW ++S + E S+ AL M G+ +
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEV-YVGNALITMYSRWGRLVEARRVFD 116
VT + LS C G +H V+ LD + AL+ +Y+ G+L + V
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +++ V+WN+++S Y G ++A+ +M+ + ++ D + S+ SAC + +
Sbjct: 364 VVSDRNIVAWNSLISLYAHRG-MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
LGKQIHG I+ V N L+ YSK A+ VF ++ R+V++W +M+
Sbjct: 423 LGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEP 290
+ N +A+SLF M + N+VTF+ +I A SIG+L K G+ +H I + L +
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEK-GKWVHHKLIISG-LKDL 539
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
LI MYA+ + +E VF +S R I+SW+++I+ Y +G +A+ F +++
Sbjct: 540 FTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVES 599
Query: 351 -SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+KPN F +VL+A G + S++ G+ + + G+ + + +D+ + G +
Sbjct: 600 GTKPNEVVFMNVLSACGHSG--SVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLK 657
Query: 410 ESQRVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMEN--KGVRPDSITFLSVLT 466
E+ R E ++ + W ++++ H M+ K ++N + D + ++L+
Sbjct: 658 EAYRTIKEMPFLADASVWGSLVNGCRIHQK----MDIIKAIKNDLSDIVTDDTGYYTLLS 713
Query: 467 -VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+ G + R L +M K +++ P + + +D +V R EE
Sbjct: 714 NIYAEEGEWEEFRRLRSAM-KSSNLKKVPGYSAIEIDQ--KVFRFGAGEE 760
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 148/313 (47%), Gaps = 17/313 (5%)
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+P LI YA S S VF+ + + LI L AA+ + ++
Sbjct: 33 DPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV 92
Query: 349 KES-KPNAYTFGSVLNA-VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
E+ + + + F SVL A G+ E +S+ G + H IIK G+D D ++ ++LL MYG+ G
Sbjct: 93 SETTQISKFVFPSVLRACAGSREHLSV--GGKVHGRIIKGGVDDDAVIETSLLCMYGQTG 150
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
++ ++++VF+ + AW+ ++S+ +G+ + FK M + GV PD++T +SV+
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIPGGP 524
C G + R + + + D C ++ M + G L +E + +I
Sbjct: 211 GCAELGCLRIARSVHGQITRKMF---DLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN 267
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+S +++ + + E E+ + +M +G ++ LY+ ++ ++R+
Sbjct: 268 AVS-WTAMISS---YNRGEFSEKALRSFSEMIKSGIEPNLV--TLYSVLSSCGLIGLIRE 321
Query: 585 GMKSKG--VRKEV 595
G G VR+E+
Sbjct: 322 GKSVHGFAVRREL 334
>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 202/677 (29%), Positives = 344/677 (50%), Gaps = 52/677 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y K G A +F L+ P++VS+ ++SGF KS+ A+ RM G+ + ++
Sbjct: 133 YLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSF 192
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
L+ C+ G QLH++++K G + +V NAL+ +Y + G L ++FDEMP+
Sbjct: 193 VAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPH 252
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNLELG 178
+D SWN ++S ++ Y E L MR+ G R+DH + ++ A ++ +G
Sbjct: 253 RDIASWNTVISSVVKEMMY--ERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASM-VG 309
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
++IH IK+G+ +++SV N L+ Y+KC +F +M R+VI+WT MI+ E
Sbjct: 310 REIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEF 369
Query: 238 -----------------------------------DAVSLFKEMRLDGVCPNDVTFIGLI 262
A++ F M +GV D T G++
Sbjct: 370 GLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVL 429
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI- 321
+A + K + IHG +K F S + L+ M R M D++K+F + S +
Sbjct: 430 NACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSG 489
Query: 322 -ISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKH-GQRC 379
I W ++I GYA+N A+ F E S +G ++ G++
Sbjct: 490 SIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVAST-AVLGVCGTLAFHEMGKQI 548
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H H +K G SD VG++++ MY K ++ ++ +VFN +W +I+ H
Sbjct: 549 HCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQG 608
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVC--GRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
+ ++ + +ME G++PD++TF+ +++ + ++ R LF SM YHI+P+ +HY
Sbjct: 609 DEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHY 668
Query: 498 SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
+ +V +LG G LEEAEE++ ++P P SV ++LL ACRIH N +G+R A L+ M+P
Sbjct: 669 TSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKP 728
Query: 558 AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNT 617
+Y+L+SNLY+ G W ++R+ M+ KG RK G SW + + +H F + D +
Sbjct: 729 LDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSW--IIHENKVHSFYARDKS 786
Query: 618 HPRSEEIYRMAECLGSE 634
HP++++I+ E L E
Sbjct: 787 HPQAKDIHSGLELLIME 803
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 236/490 (48%), Gaps = 60/490 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLI-GVVFD 56
M +Y K G D L +F+ + + DI SWNTV+S K + A M I G D
Sbjct: 231 MGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRID 290
Query: 57 AVTYSTALSFCLDHEGF--LFGLQLHSLIVKFGLDSEVYVGNALITMYSR---------- 104
T ST L + G + G ++H+ ++K G +S + V NALI Y++
Sbjct: 291 HFTLSTIL---VAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVAL 347
Query: 105 -----------WGRLVEAR----------RVFDEMPNKDSVSWNAILSGYTQDGDYGVEA 143
W ++ A VFD+MP ++S+S+NAILSG+ Q+G+ G +A
Sbjct: 348 FEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGE-GSKA 406
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
+ M+ +G+ L + T +ACG ++ KQIHG +K G+G++ + L+
Sbjct: 407 LAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDM 466
Query: 204 YSKCEVTGDANKV--FRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPND- 255
++C DA K+ I WT+MI + E+A+SLF + +L+G D
Sbjct: 467 CTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDK 526
Query: 256 ---VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
+G+ ++ + G+ IH +K+ FLS+ V N +ITMY++ +M D+ KV
Sbjct: 527 VASTAVLGVCGTLAFHEM---GKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKV 583
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
F+ + +I+SWN LI+G+ + A+ + + K KP+ TF +++A
Sbjct: 584 FNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSN 643
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIFESQRVFNETQEKSEFA-WTA 428
+ + +R +K DP V ++L+ + G G + E++ + N+ + E + W A
Sbjct: 644 LVDNCRRLFLS-MKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRA 702
Query: 429 IISALARHGD 438
++ A H +
Sbjct: 703 LLDACRIHSN 712
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 146/531 (27%), Positives = 246/531 (46%), Gaps = 56/531 (10%)
Query: 86 FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAIL 145
F L ++++ NALI Y + G + A +VF + + VS+ A++SG+ + + +A+
Sbjct: 117 FKLAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAK-SNRERQAME 175
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
M G+ L+ SF + + C +LELG Q+H + IKMG+ + V N LM Y
Sbjct: 176 IFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYG 235
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEM-RLDGVCPNDVTFI 259
KC ++F M R++ SW T+IS M E A LF++M R+DG + T
Sbjct: 236 KCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLS 295
Query: 260 G-LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR----------FESMQD 308
L+ A + ++V GR IH IK F S SV N LI Y + FE M+
Sbjct: 296 TILVAARGLASMV--GREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRV 353
Query: 309 SE---------------------KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ +VFD++ R IS+NA++SG+ QNG A+ F +
Sbjct: 354 RDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRM 413
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++E + +T VLNA G + K ++ H I+K G S+ + +ALLDM + G
Sbjct: 414 VEEGVELTDFTLTGVLNACGLL--MEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCG 471
Query: 407 SIFESQRV--FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR-PDSITFLS 463
+ ++Q++ + WT++I AR+ E ++ F + + +G D + +
Sbjct: 472 RMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTA 531
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL VCG G+ + LK + S ++ M + +++A ++ +P
Sbjct: 532 VLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNS-IITMYSKCSNMDDAIKVFNVMPAH 590
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG----SGSYVLMSNLY 570
+S L+ +H G+ KME AG + ++VL+ + Y
Sbjct: 591 DIVS-WNGLIAGHLLH---RQGDEALSVWSKMEKAGIKPDTVTFVLIISAY 637
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+ I K L D + +AL+ Y K G + + +VF + ++TA+IS A+
Sbjct: 113 HASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRE 170
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK----DYHIEPSPD 495
M F M + G+ + +F+++LTVC R + G L ++K +Y +
Sbjct: 171 RQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNA- 229
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIP 521
++ + G+ G L+ +L ++P
Sbjct: 230 ----LMGLYGKCGYLDSVLQLFDEMP 251
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 200/652 (30%), Positives = 346/652 (53%), Gaps = 33/652 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N Y K G D A +F+ + ++V W +++ + ++ +A S M G+ +
Sbjct: 111 INFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSS 170
Query: 58 VTYSTALSFCLDHEGFLFGLQ-------LHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
VT + LFG+ LH + +G S++ + N++++MY + +
Sbjct: 171 VTMLS----------LLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEY 220
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
+R++FD M +D VSWN+++S Y Q G Y E +L L M +G D +F S S
Sbjct: 221 SRKLFDYMDQRDLVSWNSLVSAYAQIG-YICEVLLLLKTMRIQGFEPDPQTFGSVLSVAA 279
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
L+LG+ +HG ++ + V L+ Y K A ++F R D++V+ WT
Sbjct: 280 SRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTA 339
Query: 231 MISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MIS + + A+++F++M GV + T +I A + G +HG +
Sbjct: 340 MISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHE 399
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ + N L+TM+A+ + S VFD+++ R ++SWNA+I+GYAQNG A+ F
Sbjct: 400 LPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFN 459
Query: 346 GVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ + + P++ T S+L G A L G+ HS +I+ GL +V ++L+DMY K
Sbjct: 460 EMRSDHQTPDSITIVSLLQ--GCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCK 517
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + +QR FN+ +W+AII HG E+ + + + G++P+ + FLSV
Sbjct: 518 CGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSV 577
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L+ C NG++ +G ++++SM +D+ I P+ +H++C+VD+L R GR+EEA L + P
Sbjct: 578 LSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNLYKKKFSDP 637
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
L VL +L ACR +GN E+G+ IA+ ++ ++P +G++V +++ YA WE V
Sbjct: 638 VLDVLGIILDACRANGNNELGDTIANDILMLKPMDAGNFVQLAHCYASINKWEEVGEAWT 697
Query: 585 GMKSKGVRKEVGFSWADV-GDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
M+S G++K G+S+ D+ G I F + N+HP+ +EI + L EM
Sbjct: 698 HMRSLGLKKIPGWSFIDIHGTIT---TFFTDHNSHPQFQEIVCTLKFLRKEM 746
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 241/472 (51%), Gaps = 13/472 (2%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
DA T+ + L C F GL LH I+ GL + Y+ ++LI Y+++G AR+VF
Sbjct: 68 DAYTFPSLLKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVF 127
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D MP ++ V W +I+ Y++ G EA EM R+G++ V+ S ++
Sbjct: 128 DFMPERNVVPWTSIIGCYSRTGRVP-EAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHV 186
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+ +HG +I G+ + +++ N ++S Y KC + K+F M R+++SW +++S
Sbjct: 187 QC---LHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAY 243
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ + + L K MR+ G P+ TF ++ + +K GR +HG ++T F +
Sbjct: 244 AQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDA 303
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V LI MY + ++ + ++F+ ++++ W A+ISG QNG + A+ F ++K
Sbjct: 304 HVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKF 363
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
K + T SV+ A +L G H ++ + L D ++L+ M+ K G +
Sbjct: 364 GVKSSTATMASVITACAQLGSYNL--GTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLD 421
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+S VF++ +++ +W A+I+ A++G + F EM + PDSIT +S+L C
Sbjct: 422 QSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCA 481
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
G +H G+ + ++++ + P + +VDM + G L+ A+ Q+P
Sbjct: 482 STGQLHLGKWIHSFVIRN-GLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMP 532
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 210/420 (50%), Gaps = 32/420 (7%)
Query: 112 RRVFDEMPNKDSVS-----WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA 166
+R +P+ S S +NAI++ ++ G + + + M++ + D +F S
Sbjct: 18 KRYVVSLPHPSSASATINSFNAIINHHSSQGAHR-QVLATYASMLKTHVPSDAYTFPSLL 76
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
AC LG +H + G + + L++ Y+K A KVF M +RNV+
Sbjct: 77 KACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVV 136
Query: 227 SWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
WT++I + +A SLF EMR G+ P+ VT + L+ +S + + +HG
Sbjct: 137 PWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVS---ELAHVQCLHGSA 193
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG------ 335
I F+S+ ++ N +++MY + +++ S K+FD + R+++SWN+L+S YAQ G
Sbjct: 194 ILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVL 253
Query: 336 --LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
L +Q F +P+ TFGSVL+ AA LK G+ H I++ D D
Sbjct: 254 LLLKTMRIQGF-------EPDPQTFGSVLSV--AASRGELKLGRCLHGQILRTCFDLDAH 304
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
V ++L+ MY K G+I + R+F + +K WTA+IS L ++G + + F++M G
Sbjct: 305 VETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFG 364
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
V+ + T SV+T C + G + G + M + + + + +V M + G L+++
Sbjct: 365 VKSSTATMASVITACAQLGSYNLGTSVHGYMFR-HELPMDIATQNSLVTMHAKCGHLDQS 423
>gi|110741296|dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana]
Length = 727
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 188/608 (30%), Positives = 325/608 (53%), Gaps = 39/608 (6%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIV--KFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
Y+ C + L G+ LH ++ + V + N LI MY++ G ++ AR+VFD
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP ++ VSW A+++GY Q G+ + L M + + +S ++C +E
Sbjct: 121 TMPERNVVSWTALITGYVQAGNE--QEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEP--- 175
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE---VTGDANKVFRRMHDRNVISWTTMIS 233
GKQ+HG+++K+G + V N ++S Y +C +A VF + +N+++W +MI+
Sbjct: 176 -GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIA 234
Query: 234 MNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-----IGNLVKEGRM-IHGLCI 282
+ + A+ +F M DGV + T + + ++ + N V + + +H L +
Sbjct: 235 AFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTV 294
Query: 283 KTNFLSEPSVCNCLITMYAR-FESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAA 340
K+ +++ V LI +Y+ E D K+F E+S CR+I++WN +I+ +A A
Sbjct: 295 KSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPERAI 354
Query: 341 VQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
FG +++ K P+ YTF SVL A ++ +H H+ +IK G +D ++ ++L
Sbjct: 355 --HLFGQLRQEKLSPDWYTFSSVLKACAGL--VTARHALSIHAQVIKGGFLADTVLNNSL 410
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+ Y K GS+ RVF++ + +W +++ A + HG +S++ F++M+ + PDS
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDS 467
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
TF+++L+ C G + +G +F SM + P +HY+C++DML R R EAEE++
Sbjct: 468 ATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIK 527
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM-EPAGSGSYVLMSNLYAEKGDWE 577
Q+P P V +LLG+CR HGN +G+ AD L ++ EP S SY+ MSN+Y +G +
Sbjct: 528 QMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFN 587
Query: 578 MVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGS---E 634
+ K M++ VRKE SW ++G + +H F+SG P E +YR + L S E
Sbjct: 588 EANLSIKEMETWRVRKEPDLSWTEIG--NKVHEFASGGRHRPDKEAVYRELKRLISWLKE 645
Query: 635 MKYLNSKR 642
M Y+ R
Sbjct: 646 MGYVPEMR 653
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 242/515 (46%), Gaps = 71/515 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFALRMNLIGVVF-DAV 58
+NMY K G A +F+ + ++VSW +++G+ + ++ F L +++ F +
Sbjct: 103 INMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEF 162
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW---GRLVEARRVF 115
T S+ L+ C + G Q+H L +K GL +YV NA+I+MY R EA VF
Sbjct: 163 TLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVF 218
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ + K+ V+WN++++ + Q + G +AI + M G+ D + + S+ +L
Sbjct: 219 EAIKFKNLVTWNSMIAAF-QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDL 277
Query: 176 ---ELGK---QIHGVSIKMGYGTHVSVGNVLMSTYSK-CEVTGDANKVFRRM-HDRNVIS 227
E+ K Q+H +++K G T V L+ YS+ E D K+F M H R++++
Sbjct: 278 VPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVA 337
Query: 228 WTTMIS----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
W +I+ + E A+ LF ++R + + P+ TF ++ A + + IH IK
Sbjct: 338 WNGIITAFAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIK 397
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
FL++ + N LI YA+ S+ +VFD++ R+++SWN+++ Y+ +G + +
Sbjct: 398 GGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPV 457
Query: 344 FFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
F + + P++ TF ++L+A A
Sbjct: 458 FQKM--DINPDSATFIALLSACSHA----------------------------------- 480
Query: 404 KRGSIFESQRVFNETQEKSEFA-----WTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
G + E R+F EK E + +I L+R + K+M + PD+
Sbjct: 481 --GRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMP---MDPDA 535
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
+ ++++L C ++G G+ D LK+ +EP+
Sbjct: 536 VVWIALLGSCRKHGNTRLGKLAADK-LKEL-VEPT 568
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 10/235 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++ Y K G D + +F+++++ D+VSWN++L + S + + D+ T+
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATF 470
Query: 61 STALSFCLDHEGFL-FGLQL-HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
LS C H G + GL++ S+ K ++ +I M SR R EA V +M
Sbjct: 471 IALLSAC-SHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQM 529
Query: 119 P-NKDSVSWNAILSGYTQDGDYGVEAILA--LIEMMRKGLRLDHVSFTSAASACG--HEK 173
P + D+V W A+L + G+ + + A L E++ + ++ ++ +A G +E
Sbjct: 530 PMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEA 589
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
NL + + K + +GN + S D V+R + + +ISW
Sbjct: 590 NLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYREL--KRLISW 642
>gi|297794367|ref|XP_002865068.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
gi|297310903|gb|EFH41327.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
Length = 659
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 192/623 (30%), Positives = 323/623 (51%), Gaps = 43/623 (6%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDDALS----FALRMNLIGVVFDAVTYSTALSFCLDHE 71
+F+ + + DIVSW +++G+ + ++ F+ + V D S AL C
Sbjct: 42 LFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKACGQSS 101
Query: 72 GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
+G LH+ K L + V+VG L+ MY R G++ + R+F EM +++V+W AI+S
Sbjct: 102 NIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTWTAIVS 161
Query: 132 GYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
G + G + E + EM R KGL D +F +A AC + ++ GK+IH I G
Sbjct: 162 GMVEAGRHK-EGLTYFSEMSRSKGLS-DDFAFATALKACARLRQVKYGKEIHTHVIVRGS 219
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKE 245
+ V N L++ Y++C D +F M +R+V SWTT+I E AV+ F +
Sbjct: 220 DASLCVVNSLINMYTECGEMHDGVHLFESMSERDVFSWTTLIDAYSQMGQEEKAVATFLK 279
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
+ + + C+ + SV N ++ MY+
Sbjct: 280 I----------------------EIFRRTSQWTYFCLGDSL----SVSNSMMKMYSTCGK 313
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNA 364
+ + +F + R+II+W+ +I GY+Q GL F + + KP S+L+
Sbjct: 314 LDSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALASLLSV 373
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
G L+ G++ H+ + +GL+ + + SAL++MY K GSI E+ ++F ET
Sbjct: 374 SGTMA--VLEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTDDIV 431
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+ TA+I+ A HG+ + ++ F++ G+RPD++TF+SVLT C +G + G F+ M
Sbjct: 432 SLTAMINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHSGQLDLGFRYFNLM 491
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+Y+I P +HY CMVD+L R GRL +AE+++ ++P V +LL AC+ G+ E
Sbjct: 492 QDEYNIRPVKEHYGCMVDLLCRAGRLSDAEKMINEMPWKKDDVVWTTLLNACKAKGDTER 551
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
G R A+ +++++P ++V ++N+Y+ G E A +RK MKSKGV K G W+ +
Sbjct: 552 GRRAAERILELDPTSETAFVTLANIYSSTGKLEEAAHVRKAMKSKGVIKVPG--WSSIKI 609
Query: 605 IDGLHGFSSGDNTHPRSEEIYRM 627
+D F SG +H +SE+IY +
Sbjct: 610 MDRASTFVSGSQSHSQSEDIYSI 632
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 234/498 (46%), Gaps = 47/498 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY ++G+ DK IF + + V+W ++SG ++ + L++ M+ + D
Sbjct: 129 LNMYMRTGKIDKGCRIFTEMQFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDD 188
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++TAL C +G ++H+ ++ G D+ + V N+LI MY+ G + + +F+
Sbjct: 189 FAFATALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFES 248
Query: 118 MPNKDSVSWNAILSGYTQDG-DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +D SW ++ Y+Q G + A IE+ R+ + +
Sbjct: 249 MSERDVFSWTTLIDAYSQMGQEEKAVATFLKIEIFRRTSQWTYFCL-------------- 294
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G +SV N +M YS C A+ +F+ M R++I+W+T+I
Sbjct: 295 --------------GDSLSVSNSMMKMYSTCGKLDSASVLFQGMRRRDIITWSTIIGGYS 340
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E+ F MR G P D L+ ++++GR +H L + +
Sbjct: 341 QAGLGEEVFMCFSWMRQAGPKPTDPALASLLSVSGTMAVLEQGRQVHALALYLGLEQNST 400
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ + LI MY++ S++++ K+F+E +I+S A+I+GYA++G + A+ F +K
Sbjct: 401 IRSALINMYSKCGSIEEASKIFEETDTDDIVSLTAMINGYAEHGNTKEAIDLFEKSLKVG 460
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSI 408
+P+ TF SVL A + + L G R + ++++ + P+ ++D+ + G +
Sbjct: 461 LRPDTVTFISVLTACSHSGQLDL--GFR-YFNLMQDEYNIRPVKEHYGCMVDLLCRAGRL 517
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT-FLSVLT 466
+++++ NE +K + WT +++A GD E + + + P S T F+++
Sbjct: 518 SDAEKMINEMPWKKDDVVWTTLLNACKAKGDTERGRRAAERILE--LDPTSETAFVTLAN 575
Query: 467 VCGRNGMIHKGRHLFDSM 484
+ G + + H+ +M
Sbjct: 576 IYSSTGKLEEAAHVRKAM 593
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 186/438 (42%), Gaps = 34/438 (7%)
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
AR +FD+MP++D VSW AI++GY + L + + D + A ACG
Sbjct: 39 ARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKACG 98
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
N+ G+ +H + K T V VG L++ Y + ++F M RN ++WT
Sbjct: 99 QSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTWTA 158
Query: 231 MIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
++S ++ ++ F EM +D F + A + VK G+ IH I
Sbjct: 159 IVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACARLRQVKYGKEIHTHVIVRG 218
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ V N LI MY M D +F+ +S R++ SW LI Y+Q G AV F
Sbjct: 219 SDASLCVVNSLINMYTECGEMHDGVHLFESMSERDVFSWTTLIDAYSQMGQEEKAVATFL 278
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ + + +T+ + +++ V ++++ MY
Sbjct: 279 KIEIFRRTSQWTYFCLGDSLS---------------------------VSNSMMKMYSTC 311
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + + +F + + W+ II ++ G E V F M G +P S+L
Sbjct: 312 GKLDSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALASLL 371
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+V G ++ +GR + L +E + S +++M + G +EEA ++ +
Sbjct: 372 SVSGTMAVLEQGRQVHALALY-LGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTDDI 430
Query: 526 LSVLQSLLGACRIHGNVE 543
+S L +++ HGN +
Sbjct: 431 VS-LTAMINGYAEHGNTK 447
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 12/214 (5%)
Query: 271 VKEGRMIHGLCIKTN--FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
V+ G I C + L +P + R + + +FD++ R+I+SW A+I
Sbjct: 5 VRNGGTIQRFCTAASISLLEKP------VEKIVRISNQGAARHLFDQMPHRDIVSWTAII 58
Query: 329 SGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
+GY S A+ F ++ + P+ L A G + +I +G+ H++ K
Sbjct: 59 NGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKACGQSSNIG--YGESLHAYAFKT 116
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
L + VG+ LL+MY + G I + R+F E Q ++ WTAI+S + G ++ + F
Sbjct: 117 SLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTWTAIVSGMVEAGRHKEGLTYF 176
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
EM D F + L C R + G+ +
Sbjct: 177 SEMSRSKGLSDDFAFATALKACARLRQVKYGKEI 210
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 207/682 (30%), Positives = 346/682 (50%), Gaps = 56/682 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
+ Y + G AL +FN + + D V++N++++ F + AL M L G +
Sbjct: 103 LTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSS 162
Query: 58 VTYSTALSFCLDH--EGFLFGLQLHSLIVKFG-LD-SEVYVGNALITMYSRWGRLVEARR 113
T + L C H E G + H+ +K G LD E + NAL++MY+R G + +A+
Sbjct: 163 FTLVSVLLAC-SHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQM 221
Query: 114 VFDEMPNKDS-----VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASA 168
+F + DS V+WN ++S Q G G EAI + +M+ +G+R D ++F SA A
Sbjct: 222 LFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCG-EAIEVIYDMVARGVRPDGITFASALPA 280
Query: 169 CGHEKNLELGKQIHGVSIK-MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH--DRNV 225
C + L LG+++H +K + V + L+ Y+ E G A +VF + R +
Sbjct: 281 CSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQL 340
Query: 226 ISWTTMI-----SMNREDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
W M+ + E+A+ LF M + GV P++ T G++ A + +HG
Sbjct: 341 GLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHG 400
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
+K P V N L+ +YAR M+ + +F + R+++SWN LI+G G
Sbjct: 401 YVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQG---- 456
Query: 340 AVQAFFGVIKESK-----------------------PNAYTFGSVLNAVGAAEDISLKHG 376
+ F +++E + PN T ++L G A + G
Sbjct: 457 HIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLP--GCAMLAAPAKG 514
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
+ H + ++ LDSD VGSAL+DMY K G + S+ VF+ +++ W +I A H
Sbjct: 515 KEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMH 574
Query: 437 GDYESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
G + + F M + +P+ +TF++ L C +GM+ +G LF SM +++ ++P+PD
Sbjct: 575 GLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPD 634
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQI-PGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
++C VD+LGR GRL+EA ++ + PG +S S LGACR+H NV +GE A+ L +
Sbjct: 635 LHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQ 694
Query: 555 MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSG 614
+EP + YVL+ N+Y+ G WE + +R M+ +GV KE G SW ++ + +H F +G
Sbjct: 695 LEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGV--IHRFMAG 752
Query: 615 DNTHPRSEEIYRMAECLGSEMK 636
++ HP S ++ + L M+
Sbjct: 753 ESAHPESTLVHAHMDALWERMR 774
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 230/464 (49%), Gaps = 40/464 (8%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
V NAL+T Y+R G L A +F+ MP++D+V++N++++ + + A+ AL +M+ +
Sbjct: 98 VANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRW-LPALDALRDMLLE 156
Query: 154 GLRLDHVSFTSAASACGH-EKNLELGKQIHGVSIKMGY--GTHVSVGNVLMSTYSKCEVT 210
G L + S AC H ++L LG++ H ++K G+ G N L+S Y++ +
Sbjct: 157 GHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLV 216
Query: 211 GDANKVFRRMHDRN-----VISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIG 260
DA +F + + V++W TM+S+ + +A+ + +M GV P+ +TF
Sbjct: 217 DDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFAS 276
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPS-VCNCLITMYARFESMQDSEKVFDELSC- 318
+ A S ++ GR +H +K + L+ S V + L+ MYA E + + +VFD +
Sbjct: 277 ALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGG 336
Query: 319 -REIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKH 375
R++ WNA++ GYAQ G+ A++ F + E+ P+ T VL A +E + K
Sbjct: 337 HRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGK- 395
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
+ H +++K G+ +P V +AL+D+Y + G + ++ +F + + +W +I+
Sbjct: 396 -EAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVV 454
Query: 436 HGDYESVMNQFKEMENKG------------------VRPDSITFLSVLTVCGRNGMIHKG 477
G +EM+ +G V P+++T +++L C KG
Sbjct: 455 QGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKG 514
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ + ++ + ++ S +VDM + G L + + ++P
Sbjct: 515 KEIHGYAMR-HALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP 557
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 194/406 (47%), Gaps = 24/406 (5%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIK--MGYGTHVSVGNVLMSTYSKCEVTGDAN 214
LDH + AA + ++L + IHG +++ + +G +V N L++ Y++C A
Sbjct: 57 LDHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAAL 116
Query: 215 KVFRRMHDRNVISWTTMIS---MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IG 268
+F M R+ +++ ++I+ + R A+ ++M L+G + T + ++ A S +
Sbjct: 117 ALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLA 176
Query: 269 NLVKEGRMIHGLCIKTNFL--SEPSVCNCLITMYARFESMQDSEKVFDELSCRE-----I 321
++ GR H +K FL E N L++MYAR + D++ +F + + +
Sbjct: 177 EDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGV 236
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
++WN ++S Q+G A++ + ++ +P+ TF S L A E +SL G+ H
Sbjct: 237 VTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSL--GREMH 294
Query: 381 SHIIK-VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ--EKSEFAWTAIISALARHG 437
++++K L ++ V SAL+DMY + ++RVF+ + W A++ A+ G
Sbjct: 295 AYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAG 354
Query: 438 DYESVMNQFKEMENK-GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
E + F ME + GV P T VL C R+ G+ + + +P
Sbjct: 355 MDEEALELFARMEAEAGVVPSETTIAGVLPACARSETF-AGKEAVHGYVLKRGMADNPFV 413
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
+ ++D+ R+G +E A + I +S +L+ C + G++
Sbjct: 414 QNALMDLYARLGDMEAARWIFAAIEPRDVVS-WNTLITGCVVQGHI 458
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 317/610 (51%), Gaps = 16/610 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD-DALSFALRMNL-----IGVV 54
++ Y G A +F+ PD S+ +L +++ A + AL ++
Sbjct: 71 LSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEA 130
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D S AL C+ + +G +LH VK G ++ +V N+L+ MY++ G L AR+V
Sbjct: 131 QDDFVLSLALKACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECARKV 189
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F+ +P ++ VSW ++LSG Q+G + + +L +M + + + + +AC
Sbjct: 190 FERIPGRNVVSWTSMLSGCVQNG-FAADGLLLFNKMRQDNVPPSEYTIATVITACSALIG 248
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L G+ +HG IK G ++ + L+ Y KC DA VF + +++ WTTMI
Sbjct: 249 LHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVG 308
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ N DA+ LF + + + PN VT ++ A + + GR IHG+ +K +
Sbjct: 309 YTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEY 368
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-I 348
V N L+ MYA+ +++ ++ ++F +S +++++WN+++SGYA+N + A+ F + +
Sbjct: 369 TVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSL 428
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
K P+A + L+A D+ + G+ H + +K S+ V +ALL++Y K G +
Sbjct: 429 KGPSPDAISVVHALSASVCLGDLLI--GKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDL 486
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++RVF+E +++ W A+I GD ++ F EM GV P+ + F S+L+ C
Sbjct: 487 PSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTC 546
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
GM+ + FDSM + ++I PS HY+CMVD+L R G LEEA E + +P SV
Sbjct: 547 SHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSV 606
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+ L C +H ++ GE +M + P YVL+SNLY G WE +R+ M+
Sbjct: 607 WGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLISNLYTSNGMWEKSQAIRRWMQE 666
Query: 589 KGVRKEVGFS 598
KG+ K G+S
Sbjct: 667 KGLVKLPGYS 676
>gi|15217470|ref|NP_177298.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169716|sp|Q9C9H9.1|PP114_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71420
gi|12323734|gb|AAG51830.1|AC016163_19 hypothetical protein; 56014-58251 [Arabidopsis thaliana]
gi|332197078|gb|AEE35199.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 745
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 188/608 (30%), Positives = 325/608 (53%), Gaps = 39/608 (6%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIV--KFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
Y+ C + L G+ LH ++ + V + N LI MY++ G ++ AR+VFD
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP ++ VSW A+++GY Q G+ + L M + + +S ++C +E
Sbjct: 121 TMPERNVVSWTALITGYVQAGNE--QEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEP--- 175
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE---VTGDANKVFRRMHDRNVISWTTMIS 233
GKQ+HG+++K+G + V N ++S Y +C +A VF + +N+++W +MI+
Sbjct: 176 -GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIA 234
Query: 234 MNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-----IGNLVKEGRM-IHGLCI 282
+ + A+ +F M DGV + T + + ++ + N V + + +H L +
Sbjct: 235 AFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTV 294
Query: 283 KTNFLSEPSVCNCLITMYAR-FESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAA 340
K+ +++ V LI +Y+ E D K+F E+S CR+I++WN +I+ +A A
Sbjct: 295 KSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPERAI 354
Query: 341 VQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
FG +++ K P+ YTF SVL A ++ +H H+ +IK G +D ++ ++L
Sbjct: 355 --HLFGQLRQEKLSPDWYTFSSVLKACAGL--VTARHALSIHAQVIKGGFLADTVLNNSL 410
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+ Y K GS+ RVF++ + +W +++ A + HG +S++ F++M+ + PDS
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDS 467
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
TF+++L+ C G + +G +F SM + P +HY+C++DML R R EAEE++
Sbjct: 468 ATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIK 527
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM-EPAGSGSYVLMSNLYAEKGDWE 577
Q+P P V +LLG+CR HGN +G+ AD L ++ EP S SY+ MSN+Y +G +
Sbjct: 528 QMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFN 587
Query: 578 MVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGS---E 634
+ K M++ VRKE SW ++G + +H F+SG P E +YR + L S E
Sbjct: 588 EANLSIKEMETWRVRKEPDLSWTEIG--NKVHEFASGGRHRPDKEAVYRELKRLISWLKE 645
Query: 635 MKYLNSKR 642
M Y+ R
Sbjct: 646 MGYVPEMR 653
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 249/536 (46%), Gaps = 72/536 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFALRMNLIGVVF-DAV 58
+NMY K G A +F+ + ++VSW +++G+ + ++ F L +++ F +
Sbjct: 103 INMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEF 162
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW---GRLVEARRVF 115
T S+ L+ C + G Q+H L +K GL +YV NA+I+MY R EA VF
Sbjct: 163 TLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVF 218
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ + K+ V+WN++++ + Q + G +AI + M G+ D + + S+ +L
Sbjct: 219 EAIKFKNLVTWNSMIAAF-QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDL 277
Query: 176 ---ELGK---QIHGVSIKMGYGTHVSVGNVLMSTYSK-CEVTGDANKVFRRM-HDRNVIS 227
E+ K Q+H +++K G T V L+ YS+ E D K+F M H R++++
Sbjct: 278 VPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVA 337
Query: 228 WTTMIS----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
W +I+ + E A+ LF ++R + + P+ TF ++ A + + IH IK
Sbjct: 338 WNGIITAFAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIK 397
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
FL++ + N LI YA+ S+ +VFD++ R+++SWN+++ Y+ +G + +
Sbjct: 398 GGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPV 457
Query: 344 FFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
F + + P++ TF ++L+A A
Sbjct: 458 FQKM--DINPDSATFIALLSACSHA----------------------------------- 480
Query: 404 KRGSIFESQRVFNETQEKSEFA-----WTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
G + E R+F EK E + +I L+R + K+M + PD+
Sbjct: 481 --GRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMP---MDPDA 535
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD-HYSCMVDMLGRVGRLEEA 513
+ ++++L C ++G G+ D LK+ +EP+ Y M ++ G EA
Sbjct: 536 VVWIALLGSCRKHGNTRLGKLAADK-LKEL-VEPTNSMSYIQMSNIYNAEGSFNEA 589
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 10/235 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++ Y K G D + +F+++++ D+VSWN++L + S + + D+ T+
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATF 470
Query: 61 STALSFCLDHEGFL-FGLQL-HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
LS C H G + GL++ S+ K ++ +I M SR R EA V +M
Sbjct: 471 IALLSAC-SHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQM 529
Query: 119 P-NKDSVSWNAILSGYTQDGDYGVEAILA--LIEMMRKGLRLDHVSFTSAASACG--HEK 173
P + D+V W A+L + G+ + + A L E++ + ++ ++ +A G +E
Sbjct: 530 PMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEA 589
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
NL + + K + +GN + S D V+R + + +ISW
Sbjct: 590 NLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYREL--KRLISW 642
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 193/590 (32%), Positives = 315/590 (53%), Gaps = 48/590 (8%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITM--YSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
Q H +++ G S+ Y + L M S + L AR+VFDE+P +S +WN ++ Y
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 136 DGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
D V +I A ++M+ + + +F A +L LG+ +HG+++K G+ V
Sbjct: 108 GPD-PVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLD 249
V N L+ Y C A KVF + +++V+SW +MI+ + + A+ LFK+M +
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
V + VT +G++ A + ++ GR + + ++ N ++ MY + S++D+
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 310 EKVFD-------------------------------ELSCREIISWNALISGYAQNGLSL 338
+++FD + ++I++WNALIS Y QNG
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 339 AAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
A+ F + K K N T S L+A A+ +L+ G+ HS+I K G+ + V S
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSA--CAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
AL+ MY K G + +S+ VFN +++ F W+A+I LA HG ++ F +M+ V+P
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ +TF +V C G++ + LF M +Y I P HY+C+VD+LGR G LE+A +
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 517 VGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDW 576
+ +P P SV +LLGAC+IH N+ + E L+++EP G++VL+SN+YA+ G W
Sbjct: 525 IEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKW 584
Query: 577 EMVAILRKGMKSKGVRKEVGFSWADVGDIDGL-HGFSSGDNTHPRSEEIY 625
E V+ LRK M+ G++KE G S +IDG+ H F SGDN HP SE++Y
Sbjct: 585 ENVSELRKHMRVTGLKKEPGCSSI---EIDGMIHEFLSGDNAHPMSEKVY 631
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 212/470 (45%), Gaps = 53/470 (11%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEK-SDDALSFALRMNLIG---VVFDAVTYSTALSFCLDHE 71
+F+ + P+ +WNT++ + D LS ++++ + T+ + +
Sbjct: 86 VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145
Query: 72 GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
G LH + VK + S+V+V N+LI Y G L A +VF + KD VSWN++++
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMIN 205
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
G+ Q G +A+ +M + ++ HV+ SAC +NLE G+Q+ +
Sbjct: 206 GFVQKGSPD-KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN 264
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----------------SM 234
++++ N ++ Y+KC DA ++F M +++ ++WTTM+ SM
Sbjct: 265 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSM 324
Query: 235 NREDAVS-------------------LFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEG 274
++D V+ +F E++L + N +T + + A + ++ G
Sbjct: 325 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 384
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
R IH K V + LI MY++ ++ S +VF+ + R++ W+A+I G A +
Sbjct: 385 RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 444
Query: 335 GLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA----EDISLKHGQRCHSHIIKVGLD 389
G AV F+ + + + KPN TF +V A E SL H + G+
Sbjct: 445 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN-----YGIV 499
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGD 438
+ + ++D+ G+ G + ++ + S W A++ A H +
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 191/444 (43%), Gaps = 49/444 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y G D A +F + D+VSWN++++GF + D AL +M V
Sbjct: 173 IHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASH 232
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT LS C FG Q+ S I + ++ + + NA++ MY++ G + +A+R+FD
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 118 MPNKDSVSWNAILSGYTQDGDYGV------------------------------EAILAL 147
M KD+V+W +L GY DY EA++
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 148 IEM-MRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
E+ ++K ++L+ ++ S SAC LELG+ IH K G + V + L+ YSK
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMRLDGVCPNDVTFIGL 261
C + +VF + R+V W+ MI +M+ +AV +F +M+ V PN VTF +
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 472
Query: 262 IHAISIGNLVKEGR-MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
A S LV E + H + + E C++ + R ++ + K + +
Sbjct: 473 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPP 532
Query: 321 IIS-WNALISG---YAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHG 376
S W AL+ +A L+ A + + ++ +G E++S
Sbjct: 533 STSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVS---- 588
Query: 377 QRCHSHIIKVGLDSDPIVGSALLD 400
H+ GL +P S +D
Sbjct: 589 -ELRKHMRVTGLKKEPGCSSIEID 611
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 101/232 (43%), Gaps = 12/232 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G +K+ +FN++ D+ W+ ++ G ++A+ +M V +
Sbjct: 407 IHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG 466
Query: 58 VTYSTALSFCLDHEGFLFGLQ--LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT++ C H G + + H + +G+ E ++ + R G L +A +
Sbjct: 467 VTFTNVFCAC-SHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525
Query: 116 DEMPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMRKGLRLD--HVSFTSAASACGHE 172
+ MP S S W A+L + + A +A ++ R D HV ++ + G
Sbjct: 526 EAMPIPPSTSVWGALLGACKIHANLNL-AEMACTRLLELEPRNDGAHVLLSNIYAKLGKW 584
Query: 173 KNL-ELGKQIHGVSIKMGYG-THVSVGNVLMSTYSKCEVTGDANKVFRRMHD 222
+N+ EL K + +K G + + + ++ S + KV+ ++H+
Sbjct: 585 ENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHE 636
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDM--YGKRGSIFESQRVFNETQEKSEFAWTA 428
+SL+ ++ H H+I+ G SDP S L M S+ +++VF+E + + FAW
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 429 IISALARHGDYESVMNQFKEMENKG-VRPDSITF 461
+I A A D + F +M ++ P+ TF
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTF 134
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 185/571 (32%), Positives = 302/571 (52%), Gaps = 13/571 (2%)
Query: 74 LFGLQLHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
L G H+ I+K ++ N L+ MY++ L A+ + + P + V+W A+++G
Sbjct: 23 LLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAG 82
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Q+G + V A+L +M+ +R + +F A + GKQ+H +++K G
Sbjct: 83 SVQNGCF-VSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLIN 141
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEMR 247
V VG + YSK DA KVF M RN+ +W IS + ED+V F E+
Sbjct: 142 DVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELL 201
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
G P+ +TF ++A S + G +HG I++ + SV N LI Y + ++
Sbjct: 202 RVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVE 261
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVG 366
SE VFD + R +SW++LI+ Y QN A F KE +P + SVL A
Sbjct: 262 CSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACA 321
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
+I G+ + +K ++ + V SAL+DMYGK GSI +++ FN E++ +W
Sbjct: 322 GLSEIEF--GRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSW 379
Query: 427 TAIISALARHGDYESVMNQFKEMENK-GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
A++ A G + +EM + G+ P ++ + L+ C R G + G +F+SM
Sbjct: 380 NALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMK 439
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+ Y +EP P+HY+C+VD+LGR G +E A + + ++P P +S+ +LLGACR+HG E+G
Sbjct: 440 ERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELG 499
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
+ A+ L +++P SG++V++SN++A G WE V ++R MK G++K GFSW V
Sbjct: 500 KLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVD-- 557
Query: 606 DGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+H F + D +H + EI + L EM+
Sbjct: 558 SRIHMFQAKDKSHEKDPEIQDILGKLRKEMQ 588
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 225/468 (48%), Gaps = 47/468 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
+NMY K + A I +V+W +++G ++ +S L +
Sbjct: 49 VNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLH------------F 96
Query: 61 STALSFCLDHEGFLF---------------GLQLHSLIVKFGLDSEVYVGNALITMYSRW 105
S LS C+ F F G QLH+L VK GL ++V+VG ++ MYS+
Sbjct: 97 SDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKL 156
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
G L +A +VFDEMP+++ +WNA +S G ++++A IE++R G + D ++F +
Sbjct: 157 GFLNDAYKVFDEMPHRNLETWNAYISNSVLHGR-PEDSVIAFIELLRVGGKPDSITFCAF 215
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
+AC + L G Q+HG I+ GYG +VSV N L+ Y KC + VF RM +RN
Sbjct: 216 LNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNS 275
Query: 226 ISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+SW+++I+ E A LF R + + P D ++ A + + ++ GR + L
Sbjct: 276 VSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQAL 335
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+K V + L+ MY + S+ ++E+ F+ + R ++SWNAL+ GYA G + A
Sbjct: 336 AVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKA 395
Query: 341 VQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSA 397
V + + P+ + L+A A D LK G + + + G++ P +
Sbjct: 396 VALLEEMTSAAGIVPSYVSLICALSACSRAGD--LKTGMKIFESMKERYGVEPGPEHYAC 453
Query: 398 LLDMYGKRGSI-----FESQRVFNETQEKSEFAWTAIISALARHGDYE 440
L+D+ G+ G + F + F T W A++ A HG E
Sbjct: 454 LVDLLGRAGMVECAYDFIKRMPFPPTIS----IWGALLGACRMHGKPE 497
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 178/388 (45%), Gaps = 17/388 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
+MY K G + A +F+ + + ++ +WN +S + +D++ + + +G D+
Sbjct: 150 FDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDS 209
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ L+ C D G G QLH I++ G V V N LI Y + G + + VFD
Sbjct: 210 ITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDR 269
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++SVSW+++++ Y Q+ + + L + ++ + +S AC +E
Sbjct: 270 MGERNSVSWSSLIAAYVQNNEEEKASCL-FLRARKEDIEPTDFMVSSVLCACAGLSEIEF 328
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+ + +++K ++ V + L+ Y KC +A + F M +RN++SW ++
Sbjct: 329 GRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAH 388
Query: 233 SMNREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ AV+L +EM G+ P+ V+ I + A S +K G I +K + EP
Sbjct: 389 QGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFE-SMKERYGVEPG 447
Query: 292 VCN--CLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNG---LSLAAVQAFF 345
+ CL+ + R ++ + + IS W AL+ +G L A + F
Sbjct: 448 PEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLF 507
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDISL 373
+ + N ++ A G E++++
Sbjct: 508 ELDPKDSGNHVVLSNMFAATGRWEEVTV 535
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 10/200 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRM-NLIGVVFD 56
++MY K G D A FN + ++VSWN +L G+ ++ A++ M + G+V
Sbjct: 352 VDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPS 411
Query: 57 AVTYSTALSFCLDHEGFLFGLQL-HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
V+ ALS C G+++ S+ ++G++ L+ + R G + A
Sbjct: 412 YVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFI 471
Query: 116 DEMPNKDSVS-WNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
MP ++S W A+L G + G A L E+ K +HV ++ +A G
Sbjct: 472 KRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKD-SGNHVVLSNMFAATGRW 530
Query: 173 KNLELGK-QIHGVSIKMGYG 191
+ + + + ++ V IK G G
Sbjct: 531 EEVTVVRNEMKEVGIKKGAG 550
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 180/500 (36%), Positives = 293/500 (58%), Gaps = 14/500 (2%)
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
AL+EM+ G + + + +AC ++ L G+++H IK Y + L+ Y
Sbjct: 38 ALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYG 97
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM-RLDGVCPNDVTFI 259
KC+ DA KV M ++NV+SWT MIS + +A+S+F EM R DG PN+ TF
Sbjct: 98 KCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGK-PNEFTFA 156
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
++ + + + G+ IHGL +K N+ S V + L+ MYA+ ++++ ++F+ L R
Sbjct: 157 TVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPER 216
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQR 378
+++S A+I+GYAQ GL A++ F + E +PN T+ S+L A+ L HG++
Sbjct: 217 DVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLA--LLDHGKQ 274
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H H+++ L ++ ++L+DMY K G++ +QR+F+ E++ +W A++ ++HG
Sbjct: 275 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGL 334
Query: 439 YESVMNQFKEMEN-KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-DYHIEPSPDH 496
V+ F+ M + K V+PD++T L+VL+ C M G ++D M+ +Y I+P +H
Sbjct: 335 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEH 394
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
Y C+VDMLGR GR++EA E + ++P P VL SLLGACR+H +V++GE + L+++E
Sbjct: 395 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIE 454
Query: 557 PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDN 616
P +G+YV++SNLYA G WE V +R M K V KE G SW + LH F + D
Sbjct: 455 PENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSW--IQHEQTLHYFHANDR 512
Query: 617 THPRSEEIYRMAECLGSEMK 636
THPR EE+ + + +MK
Sbjct: 513 THPRREEVLAKMKEISIKMK 532
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 209/402 (51%), Gaps = 22/402 (5%)
Query: 27 SWNTVLSGFEK-----SDDALSFAL-RMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
S N+VL F S+ L AL M ++G Y L+ CLD G ++H
Sbjct: 15 SPNSVLQTFRPISQLCSNGRLQEALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVH 74
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
+ ++K Y+ L+ Y + L +AR+V DEMP K+ VSW A++S Y+Q G +
Sbjct: 75 AHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTG-HS 133
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EA+ EMMR + + +F + ++C L LGKQIHG+ +K Y +H+ VG+ L
Sbjct: 134 SEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSL 193
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPND 255
+ Y+K +A ++F + +R+V+S T +I+ E+A+ +F+ ++ +G+ PN
Sbjct: 194 LDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNY 253
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
VT+ L+ A+S L+ G+ H ++ + N LI MY++ ++ ++++FD
Sbjct: 254 VTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDN 313
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAV--GAAED- 370
+ R ISWNA++ GY+++GL ++ F + E KP+A T +VL+ G ED
Sbjct: 314 MPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDT 373
Query: 371 -ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+S+ G + G+ D ++DM G+ G I E+
Sbjct: 374 GLSIYDGMVAGEY----GIKPDTEHYGCIVDMLGRAGRIDEA 411
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 157/311 (50%), Gaps = 14/311 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTY 60
Y K + A + + + ++VSW ++S + + S +ALS M + T+
Sbjct: 96 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTF 155
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+T L+ C+ G G Q+H LIVK+ DS ++VG++L+ MY++ G++ EAR +F+ +P
Sbjct: 156 ATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPE 215
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D VS AI++GY Q G EA+ + +G+R ++V++ S +A L+ GKQ
Sbjct: 216 RDVVSCTAIIAGYAQLG-LDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQ 274
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI------SM 234
H ++ + + N L+ YSKC A ++F M +R ISW M+ +
Sbjct: 275 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGL 334
Query: 235 NREDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV- 292
RE + LF+ MR + V P+ VT + ++ S G + G I+ + + +P
Sbjct: 335 GRE-VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTE 393
Query: 293 -CNCLITMYAR 302
C++ M R
Sbjct: 394 HYGCIVDMLGR 404
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 17/201 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K+GQ ++A IF L D+VS +++G+ + ++AL R+ G+ +
Sbjct: 194 LDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNY 253
Query: 58 VTYS---TALS--FCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
VTY+ TALS LDH G Q H +++ L + N+LI MYS+ G L A+
Sbjct: 254 VTYASLLTALSGLALLDH-----GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQ 308
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR--KGLRLDHVSFTSAASACG 170
R+FD MP + ++SWNA+L GY++ G G E +L L +MR K ++ D V+ + S C
Sbjct: 309 RLFDNMPERTAISWNAMLVGYSKHG-LGRE-VLELFRLMRDEKRVKPDAVTLLAVLSGCS 366
Query: 171 HEKNLELGKQIHGVSIKMGYG 191
H K + G I+ + YG
Sbjct: 367 HGKMEDTGLSIYDGMVAGEYG 387
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALS-FALRMNLIGVVFD 56
++MY K G A +F+N+ +SWN +L G+ K + L F L + V D
Sbjct: 295 IDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 354
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIV--KFGLDSEVYVGNALITMYSRWGRLVEARRV 114
AVT LS C + GL ++ +V ++G+ + ++ M R GR+ EA
Sbjct: 355 AVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEF 414
Query: 115 FDEMPNKDS 123
MP+K +
Sbjct: 415 IKRMPSKPT 423
>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
Length = 1121
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 200/650 (30%), Positives = 342/650 (52%), Gaps = 33/650 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPD---IVSWNTVLSGFEK---SDDALSFALRMNLIGVV 54
++M+ + G+ DKA IF + + I WN +++ + S +AL + L GV
Sbjct: 374 LSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVK 433
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ +T+ ++L C G LH LI + G D EV V NAL+TMY + G L+++ ++
Sbjct: 434 PNCITFISSLGAC---SSLQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKL 490
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F EM KD SWN+ ++ ++ G E I L +M +G + V+F +A ++C +
Sbjct: 491 FSEMAEKDLASWNSAIAAHSYHGRSD-ECIKLLDQMRGEGFLYEKVTFLTALNSCTDPAS 549
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L+ G +H ++ GY V + +++ Y +C A ++F R+ +VI WT M+++
Sbjct: 550 LQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTV 609
Query: 235 -----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFL 287
+ + F+ M +G+ P VT + LI ++ L ++G I L ++
Sbjct: 610 YCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFRDGVWISSLAWESGLE 669
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG- 346
SE V N LI M++ F S+ + +FD + + +++ Y + A F
Sbjct: 670 SETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVKGERGKEAALTLFAR 729
Query: 347 -VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++ +P++ T + ++A G D S +R H ++GL+S+ V + L+DMYGK
Sbjct: 730 MLLEGLEPSSVTLVTAMSACGGLADPS--SSKRVHERARELGLESETCVANGLVDMYGKA 787
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G + ++ +F+ ++ W A+ A + G V+ + M+ G RPDS+TF+S+L
Sbjct: 788 GDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLL 847
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP-GGP 524
+VCG +G++ + R+ F +M +++ I+PSP HYSC++D+L R G L++AE+ + +I P
Sbjct: 848 SVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSP 907
Query: 525 GLSVL-QSLLGACRIHGNVEMGERIADA----LMKMEPAG----SGSYVLMSNLYAEKGD 575
S + +LLGACR GN R A + KMEP S ++V ++N+ A G+
Sbjct: 908 ASSPMWMALLGACRSLGNSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGN 967
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
W+ +RK M KG+RKE G S V + LH F +GD HPR EEIY
Sbjct: 968 WDEALSIRKAMAEKGLRKEPGRSLIAVK--NRLHEFVAGDRDHPRREEIY 1015
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 159/540 (29%), Positives = 271/540 (50%), Gaps = 27/540 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY K G+ D+A F+++ + +I SW ++L + + AL +M GV D
Sbjct: 63 VQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDR 122
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGL---DSE----VYVGNALITMYSRWGRLVE 110
+ Y+ L C G +LH+ I + GL D E ++GN L+ MY + GR E
Sbjct: 123 LVYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDE 182
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A+R FD + +K+ SW +IL Y G + +A+ +M++ G+ D + F +A + CG
Sbjct: 183 AQRAFDSIAHKNIFSWTSILVAYFHAGLHA-QALERFHQMIKAGVEPDRLVFLAALNVCG 241
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
K LE G IH + + +GN L+S Y KC A ++F + RNVISWT
Sbjct: 242 ILKRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTI 301
Query: 231 MISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISI-GNLVKEGRMIHGLCIKT 284
++S+ R + L + M ++G+ P+ V + L++ S G L ++ M H +
Sbjct: 302 LVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGG 361
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDEL---SCREIISWNALISGYAQNGLSLAAV 341
E V L++M+AR + + ++F+++ S + I WNA+I+ YA G S A+
Sbjct: 362 GLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEAL 421
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
+ ++ KPN TF S L A SL+ G+ H I + G D + V +AL+
Sbjct: 422 FLLDSLQLQGVKPNCITFISSLGACS-----SLQDGRALHLLIHESGFDQEVSVANALVT 476
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MYGK GS+ +S ++F+E EK +W + I+A + HG + + +M +G + +T
Sbjct: 477 MYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVT 536
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
FL+ L C + G + + +++ + E S +++M GR G L+ A E+ ++
Sbjct: 537 FLTALNSCTDPASLQDGVLMHEKIVQCGY-EADTVVASAVINMYGRCGGLDRAREIFTRV 595
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 248/522 (47%), Gaps = 40/522 (7%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGL---DSE----VYVGNALITMYSRWGRLVEA 111
+Y+ L C G +LH+ I + GL D E ++GN L+ MY + GR EA
Sbjct: 16 SYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+R FD + +K+ SW +IL Y G + +A+ +M++ G+ D + + CG
Sbjct: 76 QRAFDSIAHKNIFSWTSILVAYFHAGLHA-QALERFHQMIKAGVEPDRLVYARLLKECGR 134
Query: 172 EKNLELGKQIHGVSIKMGY--------GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
+L GK++H + G G +GN L+ Y KC T +A + F + +
Sbjct: 135 LGDLAQGKRLHAQIRESGLLLDDREESGARF-LGNCLVQMYGKCGRTDEAQRAFDSIAHK 193
Query: 224 NVISWTTMISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
N+ SWT+++ A+ F +M GV P+ + F+ ++ I +++G IH
Sbjct: 194 NIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIH 253
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
S+ + N L++MY + + ++++FD L R +ISW L+S +A+NG
Sbjct: 254 RQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRR- 312
Query: 339 AAVQAFFGVIKES-----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
+ +G+++ KP+ ++LN V ++ + + H +I+ GLD + +
Sbjct: 313 ---RETWGLLRSMAVEGIKPDKVLLLTLLN-VCSSRGVLDEDSWMAHDYIVGGGLDREAV 368
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEF---AWTAIISALARHGDYESVMNQFKEME 450
V +ALL M+ + G + +++ +F + + S W A+I+A A G + + ++
Sbjct: 369 VATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQ 428
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+GV+P+ ITF+S L C + GR L ++ + + + +V M G+ G L
Sbjct: 429 LQGVKPNCITFISSLGACSS---LQDGRALH-LLIHESGFDQEVSVANALVTMYGKCGSL 484
Query: 511 EEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
++ +L ++ L+ S + A HG + ++ D +
Sbjct: 485 LDSAKLFSEM-AEKDLASWNSAIAAHSYHGRSDECIKLLDQM 525
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 185/569 (32%), Positives = 313/569 (55%), Gaps = 18/569 (3%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G ++H LI + GL S+VYV N L+ MY + G L EAR VF+ P K+ SW +++ Q
Sbjct: 53 GRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQ 112
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH-EKNLELGKQIHGVSIKMGYGTHV 194
G EA+ EM+++G++ VSFT+A +AC + L G+ +H + + G+ V
Sbjct: 113 HGR-SQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAV 171
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLD 249
L+S YSKC ++ K F M + N +SW MI+ E +A+ ++M L+
Sbjct: 172 VATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLE 231
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
G+ VT+I L+ A + +K R IH ++T F + V N ++ MY + +QD+
Sbjct: 232 GIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGF--DQDVVNVILNMYGKCGCLQDA 289
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGA 367
E +F +S ++I+WN +I+ Y+Q+G + A++ F+ +++E P+ YT+ SV++A
Sbjct: 290 EAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALR-FYELMQEEGVVPDDYTYVSVIDACAT 348
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
D+ + G++ H + + S L++MYGK G + ++ +F++T K W
Sbjct: 349 LGDMEV--GKQVHRRLGDRAFQVTELANS-LVNMYGKCGILDVARSIFDKT-AKGSVTWN 404
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
A+I A A+H + F M G P ITF+SVL+ C G+ + F M +D
Sbjct: 405 AMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQD 464
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGER 547
+ + P HY CMV+ LG+ GRL +AE L+ +P P + S L CR HG+++ G+
Sbjct: 465 HGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKF 524
Query: 548 IADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDG 607
A ++++P S YV ++ ++A+ GD++ + +RK M +G+RK G S +G
Sbjct: 525 AAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLG--TS 582
Query: 608 LHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++ F++GD ++PRS+EI+ + L EMK
Sbjct: 583 VYEFTAGDQSNPRSKEIFDELKRLDKEMK 611
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 194/391 (49%), Gaps = 21/391 (5%)
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
I A I+ ++K D +C L G++IH + ++G G+ V V N L+
Sbjct: 19 IAAAIDALQKRKDADLKECVRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMM 78
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTF 258
Y KC +A VF +NV SWT +I++ ++A++LF EM G+ P+ V+F
Sbjct: 79 YGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSF 138
Query: 259 IGLIHAISIG-NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
I+A S G + GR +H L + F L++MY++ S+++S K F+ ++
Sbjct: 139 TAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMT 198
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHG 376
+SWNA+I+ +A++ L A++ + E + + T+ ++++A + LK
Sbjct: 199 ELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYD--QPSQLKSA 256
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
+ H I++ G D D V + +L+MYGK G + +++ +F + AW +I+A ++H
Sbjct: 257 RYIHDCILRTGFDQD--VVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQH 314
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG----RHLFDSMLKDYHIEP 492
G + ++ M+ +GV PD T++SV+ C G + G R L D + +
Sbjct: 315 GHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTELAN 374
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
S +V+M G+ G L+ A + + G
Sbjct: 375 S------LVNMYGKCGILDVARSIFDKTAKG 399
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 158/311 (50%), Gaps = 9/311 (2%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+ EGR IH L + S+ V N L+ MY + S++++ VF+ + + SW LI+
Sbjct: 50 LAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITV 109
Query: 331 YAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
AQ+G S A+ F+ ++K+ +P++ +F + +NA A + L G+ H+ + + G
Sbjct: 110 CAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEF-LPAGRALHALLRRYGFQ 168
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
+ ++L+ MY K GS+ ES + F E + +W A+I+A A H + ++M
Sbjct: 169 DAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKM 228
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
+G+R S+T++++++ + + R++ D +L+ + D + +++M G+ G
Sbjct: 229 FLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQ---DVVNVILNMYGKCGC 285
Query: 510 LEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMS-- 567
L++AE + + P + +++ A HG+ R + LM+ E Y +S
Sbjct: 286 LQDAEAMFKSM-SQPDVIAWNTMIAAYSQHGHTSEALRFYE-LMQEEGVVPDDYTYVSVI 343
Query: 568 NLYAEKGDWEM 578
+ A GD E+
Sbjct: 344 DACATLGDMEV 354
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 166/346 (47%), Gaps = 17/346 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G ++++ F ++ + VSWN +++ F + +AL +M L G+ +
Sbjct: 178 VSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACS 237
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY T +S +H I++ G D +V N ++ MY + G L +A +F
Sbjct: 238 VTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVV--NVILNMYGKCGCLQDAEAMFKS 295
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M D ++WN +++ Y+Q G + EA+ M +G+ D ++ S AC ++E+
Sbjct: 296 MSQPDVIAWNTMIAAYSQHG-HTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEV 354
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GKQ+H + + N L++ Y KC + A +F + + ++W MI
Sbjct: 355 GKQVHRRLGDRAFQV-TELANSLVNMYGKCGILDVARSIFDKT-AKGSVTWNAMIGAYAQ 412
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + A LF MRLDG P+ +TF+ ++ A + L +E + +C++ + P
Sbjct: 413 HSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHS-YFVCMQQDHGVRPGG 471
Query: 293 CN--CLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNG 335
+ C++ + + D+E + + ++++W + ++ +G
Sbjct: 472 GHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHG 517
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 188/555 (33%), Positives = 303/555 (54%), Gaps = 14/555 (2%)
Query: 90 SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
S VYV +L+ MY + G + +ARRVFD MP ++S SW+ +++GY + E L
Sbjct: 45 SNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYA--AEKCSEEAFDLFR 102
Query: 150 MMRKGLRLDHVSFTSAA--SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
+M + + F + A SA L +G+Q+HG+ +K G VSV N L++ Y+K
Sbjct: 103 LMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKA 162
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLI 262
G A VF +RN I+W+ MI+ ++ AVS+F +M G P + TF+G++
Sbjct: 163 GCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVL 222
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
+A S + G+ HGL +K F + V + L+ MYA+ + D+++ FD+L +I+
Sbjct: 223 NASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIV 282
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
W A++SG+ QNG A+ + + KE P+ T S L A +L+ G++ H+
Sbjct: 283 LWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIA--ALEPGKQLHT 340
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
I+K GL VGSAL MY K G++ + VF ++ AW +IIS +++G
Sbjct: 341 QIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNG 400
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
++ F+EM+ +G PD+ITF+++L C G++ +G F M KDY + P DHY+CMV
Sbjct: 401 ALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMV 460
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG 561
D+L R G L+EA++ + I G + + +LGACR + ++G + LM++ S
Sbjct: 461 DILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSS 520
Query: 562 SYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRS 621
+Y+L+SN+YA + W V +R M+ +GV K+ G SW ++ +H F G+ HP +
Sbjct: 521 AYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELN--SRVHVFVVGEQQHPEA 578
Query: 622 EEIYRMAECLGSEMK 636
E I L MK
Sbjct: 579 ENINAQLRRLAKHMK 593
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 199/377 (52%), Gaps = 17/377 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF--EKSDDALSFALRMNLIGVV---- 54
+NMYCK G A +F+ + + SW+T+++G+ EK + R+ L
Sbjct: 54 LNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKS 113
Query: 55 -FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
F A +A+S L G L G Q+H LIVK GL V V N+L+TMY++ G + A
Sbjct: 114 EFVATAVLSAVSVPL---GLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFH 170
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VF+ ++S++W+A+++GY Q+G+ A+ +M G +F +A
Sbjct: 171 VFESSRERNSITWSAMITGYAQNGE-ADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLG 229
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L +GKQ HG+ +K+G+ + V + L+ Y+KC DA + F ++++ +++ WT M+S
Sbjct: 230 ALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVS 289
Query: 234 MN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ E+A++L+ M +G+ P+ T + A + ++ G+ +H +K
Sbjct: 290 GHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGL 349
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
V + L TMY++ +++D VF + R++I+WN++ISG++QNG A+ F +
Sbjct: 350 GAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMK 409
Query: 349 KESK-PNAYTFGSVLNA 364
E P+ TF ++L A
Sbjct: 410 MEGTIPDNITFINILCA 426
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 176/327 (53%), Gaps = 12/327 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY K+G A +F + + ++W+ +++G+ + +D A+S +M+ G
Sbjct: 156 VTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTE 215
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L+ D G Q H L+VK G + ++YV +AL+ MY++ G + +A+ FD+
Sbjct: 216 FTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQ 275
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ D V W A++SG+ Q+G++ EA+ M ++G+ + S AC LE
Sbjct: 276 LYEVDIVLWTAMVSGHVQNGEHE-EALTLYARMDKEGIIPSKSTIASGLRACAGIAALEP 334
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GKQ+H +K G G VG+ L + YSKC D VFRR+ DR+VI+W ++IS +
Sbjct: 335 GKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQ 394
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+ LF+EM+++G P+++TFI ++ A S LV G L K L+ P +
Sbjct: 395 NGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLT-PRL 453
Query: 293 CN--CLITMYARFESMQDSEKVFDELS 317
+ C++ + +R +++++ + ++
Sbjct: 454 DHYACMVDILSRAGMLKEAKDFIESIT 480
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 185/571 (32%), Positives = 302/571 (52%), Gaps = 13/571 (2%)
Query: 74 LFGLQLHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
L G H+ I+K ++ N L+ MY++ L A+ + + P + V+W A+++G
Sbjct: 23 LLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAG 82
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Q+G + V A+L +M+ +R + +F A + GKQ+H +++K G
Sbjct: 83 SVQNGCF-VSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLIN 141
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEMR 247
V VG + YSK DA KVF M RN+ +W IS + ED+V F E+
Sbjct: 142 DVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELL 201
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
G P+ +TF ++A S + G +HG I++ + SV N LI Y + ++
Sbjct: 202 RVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVE 261
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVG 366
SE VFD + R +SW++LI+ Y QN A F KE +P + SVL A
Sbjct: 262 CSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACA 321
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
+I G+ + +K ++ + V SAL+DMYGK GSI +++ FN E++ +W
Sbjct: 322 GLSEIEF--GRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSW 379
Query: 427 TAIISALARHGDYESVMNQFKEMENK-GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
A++ A G + +EM + G+ P ++ + L+ C R G + G +F+SM
Sbjct: 380 NALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMK 439
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+ Y +EP P+HY+C+VD+LGR G +E A + + ++P P +S+ +LLGACR+HG E+G
Sbjct: 440 ERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELG 499
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
+ A+ L +++P SG++V++SN++A G WE V ++R MK G++K GFSW V
Sbjct: 500 KLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVD-- 557
Query: 606 DGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+H F + D +H + EI + L EM+
Sbjct: 558 SRIHMFQAKDKSHEKDPEIQDILGKLRKEMQ 588
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 224/468 (47%), Gaps = 47/468 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
+NMY K + A I +V+W +++G ++ +S L +
Sbjct: 49 VNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLH------------F 96
Query: 61 STALSFCLDHEGFLF---------------GLQLHSLIVKFGLDSEVYVGNALITMYSRW 105
S LS C+ F F G QLH+L VK GL ++V+VG ++ MYS+
Sbjct: 97 SDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKL 156
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
G L +A +VFDEMP+++ +WNA +S G ++++A IE++R G + D ++F
Sbjct: 157 GFLNDAYKVFDEMPHRNLETWNAYISNSVLHGR-PEDSVIAFIELLRVGGKPDSITFCXF 215
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
+AC + L G Q+HG I+ GYG +VSV N L+ Y KC + VF RM +RN
Sbjct: 216 LNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNS 275
Query: 226 ISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+SW+++I+ E A LF R + + P D ++ A + + ++ GR + L
Sbjct: 276 VSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQAL 335
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+K V + L+ MY + S+ ++E+ F+ + R ++SWNAL+ GYA G + A
Sbjct: 336 AVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKA 395
Query: 341 VQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSA 397
V + + P+ + L+A A D LK G + + + G++ P +
Sbjct: 396 VALLEEMTSAAGIVPSYVSLICALSACSRAGD--LKTGMKIFESMKERYGVEPGPEHYAC 453
Query: 398 LLDMYGKRGSI-----FESQRVFNETQEKSEFAWTAIISALARHGDYE 440
L+D+ G+ G + F + F T W A++ A HG E
Sbjct: 454 LVDLLGRAGMVECAYDFIKRMPFPPTIS----IWGALLGACRMHGKPE 497
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 178/388 (45%), Gaps = 17/388 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
+MY K G + A +F+ + + ++ +WN +S + +D++ + + +G D+
Sbjct: 150 FDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDS 209
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ L+ C D G G QLH I++ G V V N LI Y + G + + VFD
Sbjct: 210 ITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDR 269
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++SVSW+++++ Y Q+ + + L + ++ + +S AC +E
Sbjct: 270 MGERNSVSWSSLIAAYVQNNEEEKASCL-FLRARKEDIEPTDFMVSSVLCACAGLSEIEF 328
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+ + +++K ++ V + L+ Y KC +A + F M +RN++SW ++
Sbjct: 329 GRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAH 388
Query: 233 SMNREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ AV+L +EM G+ P+ V+ I + A S +K G I +K + EP
Sbjct: 389 QGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFE-SMKERYGVEPG 447
Query: 292 VCN--CLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNG---LSLAAVQAFF 345
+ CL+ + R ++ + + IS W AL+ +G L A + F
Sbjct: 448 PEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLF 507
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDISL 373
+ + N ++ A G E++++
Sbjct: 508 ELDPKDSGNHVVLSNMFAATGRWEEVTV 535
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 10/200 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRM-NLIGVVFD 56
++MY K G D A FN + ++VSWN +L G+ ++ A++ M + G+V
Sbjct: 352 VDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPS 411
Query: 57 AVTYSTALSFCLDHEGFLFGLQL-HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
V+ ALS C G+++ S+ ++G++ L+ + R G + A
Sbjct: 412 YVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFI 471
Query: 116 DEMPNKDSVS-WNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
MP ++S W A+L G + G A L E+ K +HV ++ +A G
Sbjct: 472 KRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKD-SGNHVVLSNMFAATGRW 530
Query: 173 KNLELGK-QIHGVSIKMGYG 191
+ + + + ++ V IK G G
Sbjct: 531 EEVTVVRNEMKEVGIKKGAG 550
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 201/647 (31%), Positives = 345/647 (53%), Gaps = 17/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNL-NNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
++MY K G A +F + + ++V WN ++ GF S + +L + V
Sbjct: 212 IDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLV 271
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ +++ AL C E FG Q+H +VK GL ++ YV +L++MYS+ G + EA VF
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFS 331
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +K WNA+++ Y ++ DYG A+ M +K + D + ++ S C
Sbjct: 332 CVVDKRLEIWNAMVAAYAEN-DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYN 390
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
GK +H K + ++ + L++ YSKC DA VF+ M ++++++W ++IS
Sbjct: 391 YGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLC 450
Query: 235 ---NREDAVSLFKEMRLD--GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++A+ +F +M+ D + P+ + +A + ++ G +HG IKT +
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN 510
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + LI +Y++ + + KVF +S +++WN++IS Y++N L ++ F ++
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 350 ESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ P++ + SVL A+ + SL G+ H + +++G+ SD + +AL+DMY K G
Sbjct: 571 QGIFPDSVSITSVLVAISSTA--SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFS 628
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ +F + Q KS W +I HGD + ++ F EM+ G PD +TFLS+++ C
Sbjct: 629 KYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISAC 688
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G + +G+++F+ M +DY IEP+ +HY+ MVD+LGR G LEEA + +P S+
Sbjct: 689 NHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSI 748
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
LL A R H NVE+G A+ L++MEP +YV + NLY E G A L MK
Sbjct: 749 WLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKE 808
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
KG+ K+ G SW +V D + F SG ++ P EI+ + L S M
Sbjct: 809 KGLHKQPGCSWIEVSDRTNV--FFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 272/544 (50%), Gaps = 31/544 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-------DIVSWNTVLSG---FEKSDDALSFALRMNL 50
+NMY K G D A+ +F+ + D+ WN+++ G F + + + RM +
Sbjct: 102 VNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLV 161
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLF--GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRL 108
GV DA + S +S F G Q+H +++ LD++ ++ ALI MY ++G
Sbjct: 162 FGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLS 221
Query: 109 VEARRVFDEMPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAA 166
++A RVF E+ +K +V WN ++ G+ G E+ L L + + ++L SFT A
Sbjct: 222 IDAWRVFVEIEDKSNVVLWNVMIVGFGGSGI--CESSLDLYMLAKNNSVKLVSTSFTGAL 279
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
AC +N G+QIH +KMG V L+S YSKC + G+A VF + D+ +
Sbjct: 280 GACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLE 339
Query: 227 SWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
W M++ E+ A+ LF MR V P+ T +I S+ L G+ +H
Sbjct: 340 IWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL 399
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
K S ++ + L+T+Y++ D+ VF + +++++W +LISG +NG A+
Sbjct: 400 FKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEAL 459
Query: 342 QAFFGVIKES----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
+ FG +K+ KP++ SV NA E +L+ G + H +IK GL + VGS+
Sbjct: 460 KV-FGDMKDDDDSLKPDSDIMTSVTNACAGLE--ALRFGLQVHGSMIKTGLVLNVFVGSS 516
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L+D+Y K G + +VF ++ AW ++IS +R+ E ++ F M ++G+ PD
Sbjct: 517 LIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPD 576
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY-SCMVDMLGRVGRLEEAEEL 516
S++ SVL + KG+ L L+ PS H + ++DM + G + AE +
Sbjct: 577 SVSITSVLVAISSTASLLKGKSLHGYTLR--LGIPSDTHLKNALIDMYVKCGFSKYAENI 634
Query: 517 VGQI 520
++
Sbjct: 635 FKKM 638
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 211/447 (47%), Gaps = 23/447 (5%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD-- 116
T+ + L C +G +H +V G + ++ +L+ MY + G L A +VFD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 117 -----EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+ +D WN+++ GY + + E + M+ G+R D S + S
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFK-EGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 172 EKNL--ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISW 228
E N E GKQIHG ++ T + L+ Y K ++ DA +VF + D+ NV+ W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 229 TTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
MI S E ++ L+ + + V +F G + A S GR IH +K
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
++P VC L++MY++ + ++E VF + + + WNA+++ YA+N +A+
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD- 359
Query: 344 FFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
FG +++ P+++T +V++ +G+ H+ + K + S + SALL +
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLG--LYNYGKSVHAELFKRPIQSTSTIESALLTL 417
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM--ENKGVRPDSI 459
Y K G ++ VF +EK AW ++IS L ++G ++ + F +M ++ ++PDS
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLK 486
SV C + G + SM+K
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSMIK 504
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 27/287 (9%)
Query: 249 DGVCP---NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
DG P + TF L+ A S + G+ IHG + + +P + L+ MY +
Sbjct: 51 DGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGF 110
Query: 306 MQDSEKVFDE-------LSCREIISWNALISGYAQ-----NGLSLAAVQAFFGVIKESKP 353
+ + +VFD +S R++ WN++I GY + G+ FGV +P
Sbjct: 111 LDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGV----RP 166
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+A++ V++ + + + G++ H +++ LD+D + +AL+DMY K G ++ R
Sbjct: 167 DAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWR 226
Query: 414 VFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
VF E ++KS W +I G ES ++ + +N V+ S +F L C ++
Sbjct: 227 VFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSE 286
Query: 473 MIHKGRHLFDSMLK-DYHIEPSPDHYSC--MVDMLGRVGRLEEAEEL 516
GR + ++K H +P Y C ++ M + G + EAE +
Sbjct: 287 NSGFGRQIHCDVVKMGLHNDP----YVCTSLLSMYSKCGMVGEAETV 329
>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
Length = 591
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 198/589 (33%), Positives = 318/589 (53%), Gaps = 33/589 (5%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVK----FGLDSE-------VYVGNALITMYSRWGRL 108
+S L+ C G LH+ +VK F L + + N+L++MY+R GR
Sbjct: 14 FSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYARCGRR 73
Query: 109 VEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAAS 167
+A RVFDEM +D+VSWN++++ GD A+ M+R R D +FT+ S
Sbjct: 74 EDAARVFDEMRVRDAVSWNSLIAASRGAGD----ALALFRRMLRSDARACDRATFTTVLS 129
Query: 168 ACGHE--KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
C +L +HG+ + G+ V VGN L++ Y +C A +VF M ++NV
Sbjct: 130 ECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNV 189
Query: 226 ISWTTMIS-MNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
I+WT MIS M R +++ SLF +M + V N+ T+ + A + +EG+ +HGL
Sbjct: 190 ITWTAMISGMARAELYKESFSLFGQM-IRTVDANNATYSCALLACARSLAAREGQQVHGL 248
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI--ISWNALISGYAQNGLSL 338
+K F + V + L+ +Y++ M+D+ VF SCRE + ++ G+AQNGL
Sbjct: 249 VVKAGFEDDLHVESGLMDVYSKCGLMEDALTVFR--SCREPDEVFLTVILVGFAQNGLEE 306
Query: 339 AAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A + F ++ ++ + T +VL A GA+ +L G++ H+ +IK + V +
Sbjct: 307 KAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFAL--GKQIHALVIKRCFGVNTYVCNG 364
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L++MY K G + ES RVF+E K+ +W +II+A ARHG V F+ M+ G +P
Sbjct: 365 LVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPT 424
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
+TFLS+L C G KG + +SM Y + P +HY+C+VDMLGR G L++A+ +
Sbjct: 425 DVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFI 484
Query: 518 GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
P + Q+L+GAC HGN E+G+ A+ L+ ++P+ + +YVL+SN+Y+ +G W+
Sbjct: 485 EDGPFTDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYVLLSNIYSSEGRWD 544
Query: 578 MVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
A + K M G+RK+ G SW ++ +H F +HP S R
Sbjct: 545 DRAKVMKRMSEMGLRKDTGKSWIELE--KEVHSFVVRSTSHPNSAAAVR 591
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 227/454 (50%), Gaps = 21/454 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRM-NLIGVVFDAVT 59
++MY + G+ + A +F+ + D VSWN++++ + DAL+ RM D T
Sbjct: 64 VSMYARCGRREDAARVFDEMRVRDAVSWNSLIAASRGAGDALALFRRMLRSDARACDRAT 123
Query: 60 YSTALSFCLD--HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++T LS C +H L+V G ++EV VGNAL+T Y G A RVF
Sbjct: 124 FTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHG 183
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ ++W A++SG + Y + +L M + + ++ +++ A AC
Sbjct: 184 MAEKNVITWTAMISGMARAELY--KESFSLFGQMIRTVDANNATYSCALLACARSLAARE 241
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
G+Q+HG+ +K G+ + V + LM YSKC + DA VFR + + + T ++ +
Sbjct: 242 GQQVHGLVVKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQ 301
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N E A LF EM G ++ T ++ A G+ IH L IK F V
Sbjct: 302 NGLEEKAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYV 361
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-S 351
CN L+ MY++ +++S +VFDE+ + +SWN++I+ +A++G Q F + + +
Sbjct: 362 CNGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGA 421
Query: 352 KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
KP TF S+L+A VG+A+ K + +S + G+ + ++DM G+ G +
Sbjct: 422 KPTDVTFLSLLHACSHVGSAK----KGLEILNSMSSQYGVLPRMEHYACVVDMLGRAG-L 476
Query: 409 FESQRVFNETQEKSEFA--WTAIISALARHGDYE 440
+ + F E ++ A W A++ A + HG+ E
Sbjct: 477 LDDAKSFIEDGPFTDNALLWQALMGACSFHGNSE 510
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 191/403 (47%), Gaps = 24/403 (5%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIK----------MGYGTHVSVG-NVLMSTYS 205
L++ F+ ++CG E +L LG +H +K + HV V N L+S Y+
Sbjct: 9 LNYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYA 68
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNR--EDAVSLFKEM-RLDGVCPNDVTFIGLI 262
+C DA +VF M R+ +SW ++I+ +R DA++LF+ M R D + TF ++
Sbjct: 69 RCGRREDAARVFDEMRVRDAVSWNSLIAASRGAGDALALFRRMLRSDARACDRATFTTVL 128
Query: 263 HAISIGNL--VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
+ + M+HGL + F +E V N L+T Y S +E+VF ++ +
Sbjct: 129 SECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKN 188
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
+I+W A+ISG A+ L + F +I+ N T+ L + A ++ + GQ+ H
Sbjct: 189 VITWTAMISGMARAELYKESFSLFGQMIRTVDANNATYSCAL--LACARSLAAREGQQVH 246
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
++K G + D V S L+D+Y K G + ++ VF +E E T I+ A++G E
Sbjct: 247 GLVVKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEE 306
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC- 499
F EM G D T +VL G + G+ + ++K + Y C
Sbjct: 307 KAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCF---GVNTYVCN 363
Query: 500 -MVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+V+M + G L E+ + ++P +S S++ A HG+
Sbjct: 364 GLVNMYSKCGELRESVRVFDEMPSKNSVS-WNSIIAAFARHGH 405
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 204/669 (30%), Positives = 345/669 (51%), Gaps = 33/669 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTV------LSGFEKSDDALSFALRMNLIGVV 54
+ + GQ A +F+ + PD ++N + L F + D LR V
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFR---VA 97
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ T+ L C G +H+ GL ++++V ALI +Y R R AR V
Sbjct: 98 PNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNV 157
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEK 173
F +MP +D V+WNA+L+GY G Y AI L++M GLR + + S
Sbjct: 158 FAKMPMRDVVAWNAMLAGYANHGMYH-HAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHG 216
Query: 174 NLELGKQIHGVSIKMGYGT---HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
L G IH ++ V +G L+ Y+KC+ A +VF M RN ++W+
Sbjct: 217 ALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSA 276
Query: 231 MIS----MNR-EDAVSLFKEMRLDGVCPNDVTFIG--LIHAISIGNLVKEGRMIHGLCIK 283
+I +R +A +LFK+M ++G+C T + L S+ +L G +H L K
Sbjct: 277 LIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADL-HMGTQLHALIAK 335
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ ++ + N L++MYA+ + ++ FDE++ ++ IS+ AL+SG QNG A +A
Sbjct: 336 SGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNG---KAEEA 392
Query: 344 FFGVIK----ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F K +P+ T S++ A + +L+HG+ H +I GL + + ++L+
Sbjct: 393 FLVFKKMQACNMEPDIATMVSLIPA--CSHLAALQHGKCSHGSVIIRGLALETSICNSLI 450
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K G I S++VF++ + +W +I+ HG + F M+N+G PD +
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDV 510
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
TF+ ++ C +G++ +G+H FD+M Y I P +HY CMVD+L R G L+EA + +
Sbjct: 511 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQS 570
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P + V +LLGACRIH N+++G++++ + K+ P G+G++VL+SN+++ G ++
Sbjct: 571 MPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEA 630
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLN 639
A +R K KG +K G+SW ++ LH F GD +HP S +IY + + ++K L
Sbjct: 631 AEVRIIQKVKGFKKSPGYSWIEIN--GSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLG 688
Query: 640 SKRERAIAL 648
+ + + L
Sbjct: 689 YQADTSFVL 697
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 179/565 (31%), Positives = 311/565 (55%), Gaps = 12/565 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLH+ ++ S + +I++Y+ L EA VF + + ++W +++ +T
Sbjct: 26 QLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQS 84
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ A+ + +EM G DH F S +C +L G+ +HG +++G + G
Sbjct: 85 LFS-RALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVC 252
N LM+ YSK KVF M ++V+S+ T+I S EDA+ + +EM +
Sbjct: 144 NALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLK 203
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ T ++ S V +G+ IHG I+ S+ + + L+ MYA+ ++DSE+V
Sbjct: 204 PDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 263
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDI 371
F L R+ ISWN+L++GY QNG A++ F ++ + +P A F SV+ A A
Sbjct: 264 FSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPA--CAHLA 321
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
+L G++ H ++++ G + + SAL+DMY K G+I ++++F+ E +WTAII
Sbjct: 322 TLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIM 381
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A HG ++ F+EM+ +GV+P+ + F++VLT C G++ + F+SM K Y +
Sbjct: 382 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 441
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
+HY+ + D+LGR G+LEEA + + ++ P SV +LL +C +H N+E+ E++A+
Sbjct: 442 QELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 501
Query: 552 LMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGF 611
+ ++ G+YVLM N+YA G W+ +A LR ++ KG+RK+ SW ++ + HGF
Sbjct: 502 IFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMK--NKTHGF 559
Query: 612 SSGDNTHPRSEEIYRMAECLGSEMK 636
SGD +HP + I + + +M+
Sbjct: 560 VSGDRSHPSMDRINEFLKAVMEQME 584
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 165/282 (58%), Gaps = 9/282 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
MNMY K D +F + D+VS+NTV++G+ +S +DAL M + DA
Sbjct: 147 MNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDA 206
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ L ++ L G ++H +++ G+DS+VY+G++L+ MY++ R+ ++ RVF
Sbjct: 207 FTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSH 266
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +DS+SWN++++GY Q+G Y EA+ +M+ +R V+F+S AC H L L
Sbjct: 267 LYRRDSISWNSLVAGYVQNGRYN-EALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHL 325
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR- 236
GKQ+HG ++ G+G ++ + + L+ YSKC A K+F RM+ + +SWT +I +
Sbjct: 326 GKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHAL 385
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+AVSLF+EM+ GV PN V F+ ++ A S LV E
Sbjct: 386 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 427
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 229/451 (50%), Gaps = 14/451 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++Y +AL +F L +P +++W +V+ F AL+ + M G D
Sbjct: 46 ISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDH 105
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + L C FG +H IV+ G+D ++Y GNAL+ MYS+ + R+VF+
Sbjct: 106 NVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFEL 165
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP KD VS+N +++GY Q G Y +A+ + EM L+ D + +S ++
Sbjct: 166 MPRKDVVSYNTVIAGYAQSGMYE-DALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLK 224
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK+IHG I+ G + V +G+ L+ Y+K D+ +VF ++ R+ ISW ++++
Sbjct: 225 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQ 284
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF++M V P V F +I A + + G+ +HG ++ F +
Sbjct: 285 NGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFI 344
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ L+ MY++ ++Q + K+FD ++ + +SW A+I G+A +G AV F + ++
Sbjct: 345 ASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 404
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFE 410
KPN F +VL A + G + + KV GL+ + +A+ D+ G+ G + E
Sbjct: 405 KPNQVAFVAVLTACSHVGLVDEAWGY--FNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 462
Query: 411 SQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ ++ + E + W+ ++S+ + H + E
Sbjct: 463 AYDFISKMRVEPTGSVWSTLLSSCSVHKNLE 493
>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
Length = 809
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 206/649 (31%), Positives = 348/649 (53%), Gaps = 32/649 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY K G+ D+A F+++ + +I SW ++L + + AL +M GV D
Sbjct: 63 VQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDR 122
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + AL+ C + G +H I LDS++ +GNAL++MY + GRL A+++FD
Sbjct: 123 LVFLAALNVCGILKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDC 182
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL-E 176
+ K+ +SW ++S + ++G E L M +G++ D V + + C L E
Sbjct: 183 LEMKNVISWTILVSVFAENGRRR-ETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDE 241
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN---VISWTTMIS 233
H + G V L+S +++C A ++F ++ D + + W MI+
Sbjct: 242 DSWMAHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMIT 301
Query: 234 MN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
++A+ L ++L GV PN +TFI + A S +++GR +H L ++ F
Sbjct: 302 AYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSS---LQDGRALHLLIDESGFDR 358
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
E SV N L+TMY R S+ DS K+F E++ +++ SWN+ I+ +A +G S ++ +
Sbjct: 359 EVSVANALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMR 418
Query: 349 KES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
E +P++ T + ++A G D S +R H ++GL+S+ V + L+DMYGK G
Sbjct: 419 GEGGLEPSSVTLVTAMSACGGLADPS--SSKRVHERARELGLESETCVANGLVDMYGKAG 476
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ ++ +F+ ++ W A+ A + G V+ + M+ G RPDS+TF+S+L+
Sbjct: 477 DVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLS 536
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP-GGPG 525
VCG +G++ + R+ F +M +++ I+PSP HYSC++D+L R G L++AE+ + +I P
Sbjct: 537 VCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPA 596
Query: 526 LSVL-QSLLGACRIHGNVEMGERI----ADALMKMEPAG----SGSYVLMSNLYAEKGDW 576
S + +LLGACR G+ R A + KMEP S ++V ++N+ A G+W
Sbjct: 597 SSPMWMALLGACRSLGDSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNW 656
Query: 577 EMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+ +RK M KG+RKE G S V + LH F +GD HPR EEIY
Sbjct: 657 DEALSIRKAMAEKGLRKEPGRSLIAVK--NRLHEFVAGDRDHPRREEIY 703
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 239/474 (50%), Gaps = 25/474 (5%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGL---DSE----VYVGNALITMYSRWGRLVEA 111
+Y+ L C G +LH+ I + GL D E ++GN L+ MY + GR EA
Sbjct: 16 SYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+R FD + +K+ SW +IL Y G + +A+ +M++ G+ D + F +A + CG
Sbjct: 76 QRAFDSIAHKNIFSWTSILVAYFHAGLHA-QALERFHQMIKAGVEPDRLVFLAALNVCGI 134
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
K LE G IH + + +GN L+S Y KC A ++F + +NVISWT +
Sbjct: 135 LKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTIL 194
Query: 232 ISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISI-GNLVKEGRMIHGLCIKTN 285
+S+ R + L + M ++G+ P+ V + L++ S G L ++ M H + +
Sbjct: 195 VSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSG 254
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDEL---SCREIISWNALISGYAQNGLSLAAVQ 342
E V L++M+AR + + ++F+++ S + I WNA+I+ YA G S A+
Sbjct: 255 LDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALF 314
Query: 343 AFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
+ ++ KPN TF S L A SL+ G+ H I + G D + V +AL+ M
Sbjct: 315 LLDSLQLQGVKPNCITFISSLGACS-----SLQDGRALHLLIDESGFDREVSVANALVTM 369
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK-GVRPDSIT 460
YG+ GS+ +S ++F+E EK +W + I+A A HG + + +M + G+ P S+T
Sbjct: 370 YGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVT 429
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
++ ++ CG + + + ++ +E + +VDM G+ G ++ A
Sbjct: 430 LVTAMSACGGLADPSSSKRVHERA-RELGLESETCVANGLVDMYGKAGDVDTAR 482
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 10/167 (5%)
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP-------IVGSALLDMYGKRGSIF 409
++ +L G D L HG+R H+ I + GL D +G+ L+ MYGK G
Sbjct: 16 SYARLLKECGRLGD--LAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTD 73
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
E+QR F+ K+ F+WT+I+ A G + + +F +M GV PD + FL+ L VCG
Sbjct: 74 EAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCG 133
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ G + ++D ++ + + +V M G+ GRL+ A++L
Sbjct: 134 ILKRLEDGAGIH-RQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQL 179
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 194/591 (32%), Positives = 317/591 (53%), Gaps = 49/591 (8%)
Query: 78 QLHSLIVKFGLDSEVYVGNAL--ITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
Q H+ +++ G+ S+ Y + L I S + L AR+VFDE+P +S +WN ++ Y
Sbjct: 49 QTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYAS 108
Query: 136 DGDYGVEAILALIEMMRKGLRL--DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
D V +I A ++M+ + + +F A +L LG+ +HG++IK G+
Sbjct: 109 GPD-PVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSD 167
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRL 248
V V N L+ Y C A KVF + +++V+SW +MI+ + + A+ LFK+M
Sbjct: 168 VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES 227
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
+ V + VT +G++ A + ++ GR + + ++ N ++ MY + S++D
Sbjct: 228 EDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIED 287
Query: 309 SEKVFDEL----------------------SCRE---------IISWNALISGYAQNGLS 337
++++FD + + RE I++WNALIS Y QNG
Sbjct: 288 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKP 347
Query: 338 LAAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A+ F + K K N T S L+A A+ +L+ G+ HS+I K G+ + V
Sbjct: 348 NEALLVFHELQLQKNIKLNQITLVSTLSA--CAQVGALELGRWIHSYIKKNGIKMNFYVT 405
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
SAL+ MY K G + +++ VFN +++ F W+A+I LA HG ++ F +M+ V+
Sbjct: 406 SALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVK 465
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P+ +TF +V C G++ + LF M Y I P HY+C+VD+LGR G LE+A +
Sbjct: 466 PNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVK 525
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
+ +P P SV +LLGAC+IH N+ + E L+++EP G++VL+SN+YA+ G
Sbjct: 526 FIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGK 585
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL-HGFSSGDNTHPRSEEIY 625
W+ V+ LRK M+ G++KE G S +IDG+ H F SGDN HP SE++Y
Sbjct: 586 WDNVSELRKHMRVTGLKKEPGCSSI---EIDGMIHEFLSGDNAHPMSEKVY 633
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 187/397 (47%), Gaps = 54/397 (13%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCL------D 69
+F+ + P+ +WNT++ + D + ++ L V ++ Y +F +
Sbjct: 87 VFDEIPQPNSFTWNTLIRAYASGPDPVC-SIWAFLDMVSSESQCYPNKYTFPFLIKAAAE 145
Query: 70 HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAI 129
G LH + +K + S+V+V N+LI Y G L A +VF + KD VSWN++
Sbjct: 146 VSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSM 205
Query: 130 LSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
++G+ Q G +A+ +M + ++ HV+ SAC ++LE G+++ +
Sbjct: 206 INGFVQKGSPD-KALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENR 264
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----------------- 232
++++ N ++ Y+KC DA ++F M +++ ++WTTM+
Sbjct: 265 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 324
Query: 233 SMNREDAVS-------------------LFKEMRLD-GVCPNDVTFIGLIHAISIGNLVK 272
+M ++D V+ +F E++L + N +T + + A + ++
Sbjct: 325 AMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALE 384
Query: 273 EGRMIHGLC----IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
GR IH IK NF V + LI MY++ ++ + +VF+ + R++ W+A+I
Sbjct: 385 LGRWIHSYIKKNGIKMNFY----VTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMI 440
Query: 329 SGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
G A +G AV F+ + + + KPN TF +V A
Sbjct: 441 GGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCA 477
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 167/369 (45%), Gaps = 41/369 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y G D A +F + D+VSWN++++GF + D AL +M V
Sbjct: 175 IHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASH 234
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT LS C FG ++ S I + ++ + + NA++ MY++ G + +A+R+FD
Sbjct: 235 VTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 294
Query: 118 MPNKDSVSWNAILSGYTQDGDYGV------------------------------EAILAL 147
M KD+V+W +L GY DY EA+L
Sbjct: 295 MEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVF 354
Query: 148 IEM-MRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
E+ ++K ++L+ ++ S SAC LELG+ IH K G + V + L+ YSK
Sbjct: 355 HELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSK 414
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMRLDGVCPNDVTFIGL 261
C A +VF + R+V W+ MI +M+ +AV +F +M+ V PN VTF +
Sbjct: 415 CGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNV 474
Query: 262 IHAISIGNLVKEGR-MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
A S LV E + + + + E C++ + R ++ + K + +
Sbjct: 475 FCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPP 534
Query: 321 IIS-WNALI 328
S W AL+
Sbjct: 535 STSVWGALL 543
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDM--YGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL+ ++ H+H+I+ G+ SDP S L + S+ +++VF+E + + F W +
Sbjct: 43 SLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTL 102
Query: 430 ISALARHGDYESVMNQFKEM--ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
I A A D + F +M P+ TF ++ + G+ L +K
Sbjct: 103 IRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIK 161
>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
Length = 825
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 178/582 (30%), Positives = 327/582 (56%), Gaps = 15/582 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+ MY + G+ + A IF+++ DI++WN +++ + + L L+ G D
Sbjct: 243 ITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDK 302
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ L+ E +HS IV+ G+ + +G AL+ MYS+ L + R +F++
Sbjct: 303 VTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEK 362
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ +SWN +++ Y + G G +A+ M G++ D+V+ + C +L+L
Sbjct: 363 MPQRNVISWNVMVTAYAKHG-LGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKL 421
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+++HG + + + N L++ Y +C A VF + RNVISWT M++
Sbjct: 422 GRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSR 481
Query: 234 MNRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
NR+D A+ LF + L GV P +TF+ + A + +GR++H +++ ++ S+
Sbjct: 482 QNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSL 541
Query: 293 CNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISGYAQNGLSLAAVQAF-FGVIKE 350
+ L+ MY R S++D++ FD+ R+ ++W+A+I+ + Q+G +Q F +
Sbjct: 542 GSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQG 601
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP-IVGSALLDMYGKRGSIF 409
+ TF S L+A D L+ G+R HS++ + D++ V ++L+ MYGK GS+
Sbjct: 602 LDMSPATFASTLSACSNLAD--LREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLD 659
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ VF ++ + W AIIS A+HG + F M+ +GV PD +TF+ +L+VC
Sbjct: 660 CAREVFETSRRQDIICWNAIISGYAQHGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCS 719
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G + + SM+ + +EP+ D+Y+C++D+LGR G+L+EAEE + + P + L
Sbjct: 720 HGGLLDEGVYAYASMV-ELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETL 778
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
SLL +C+ HG+V+ G R A+ +M+M+P S ++V++S++Y+
Sbjct: 779 TSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAHVVLSSIYS 820
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 275/525 (52%), Gaps = 12/525 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFAL--RMNLIGVVFDAV 58
++MY G D A +F+ + ++++W ++ ++ +F + M L G + V
Sbjct: 143 VSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETSLEQAFKVFRLMELEGFKSNFV 202
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
TY T + C E G+ LH V+ E + NALITMY R GRL +AR +F M
Sbjct: 203 TYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSM 262
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+D ++WNA+++ Y Q G + EA+L M+++G + D V+F + + + L
Sbjct: 263 VERDIIAWNALITEYGQHG-HVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDV 321
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
K +H ++ G ++++G L++ YSKCE D +F +M RNVISW M++ +
Sbjct: 322 KLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKH 381
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
AV + + M+LDGV P++VT +GL++ + +K GR +HG + ++ +
Sbjct: 382 GLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILW 441
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESK 352
N L+ MY R ++ +E VFD + R +ISW A+++ Y++ A+ F + + K
Sbjct: 442 NSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVK 501
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P TF L+A AE +L G+ HS ++ G D+D +GSAL+ MYG+ GSI +++
Sbjct: 502 PTCITFLEALDACVGAE--ALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAK 559
Query: 413 RVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
F++T+ K+ W+A+I+A +HG + + M+ +G+ TF S L+ C
Sbjct: 560 ACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNL 619
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ +G+ + + + + + +V M G+ G L+ A E+
Sbjct: 620 ADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREV 664
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 251/462 (54%), Gaps = 9/462 (1%)
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V Y L C + +LHS IV+ LD+ V++GN LI Y + L +A F+
Sbjct: 1 VEYVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFER 60
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ +W AI+ + + AI+ L +M+ +G++ D+++ +A ++C + L
Sbjct: 61 MSYKNVYTWTAIIGVCAHHHCHSL-AIILLRQMLLEGVKPDNITLLAALTSCETSQALPA 119
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GK IHG+ + G+ + + N L+S Y C DA +VF M RNVI+WT MI + E
Sbjct: 120 GKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAE 179
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
A +F+ M L+G N VT++ L+ A S ++ G ++H ++++ E +C
Sbjct: 180 TSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLC 239
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SK 352
N LITMY R ++D+ +F + R+II+WNALI+ Y Q+G AV + +++E K
Sbjct: 240 NALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCK 299
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ TF ++L E +L + HSHI++ G+ + +G+AL+ MY K S+ +++
Sbjct: 300 PDKVTFVALLTMSNGPE--ALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTR 357
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F + +++ +W +++A A+HG + + M+ GV+PD++T + +L VC +
Sbjct: 358 WLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSA 417
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
+ GR + + + E ++ +++M GR G +E+AE
Sbjct: 418 DLKLGRKVH-GWIAEGRCEADLILWNSLLNMYGRCGEVEQAE 458
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 272/524 (51%), Gaps = 16/524 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFAL----RMNLIGVVFD 56
++ Y K D A F ++ ++ +W ++ G S A+ +M L GV D
Sbjct: 42 IHTYGKCHSLDDAWETFERMSYKNVYTWTAII-GVCAHHHCHSLAIILLRQMLLEGVKPD 100
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T AL+ C + G +H LI + G ++ + NAL++MY G + +A+RVFD
Sbjct: 101 NITLLAALTSCETSQALPAGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFD 160
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP ++ ++W A++ + + + L+E+ +G + + V++ + AC + LE
Sbjct: 161 AMPARNVITWTAMIGAHAETSLEQAFKVFRLMEL--EGFKSNFVTYVTLVQACSKPEFLE 218
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
+G +H S++ + N L++ Y +C DA +F M +R++I+W +I+
Sbjct: 219 VGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYG 278
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E+AV L++ M +G P+ VTF+ L+ + + + +++H +++ +
Sbjct: 279 QHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIA 338
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ-AFFGVIKE 350
+ L+ MY++ ES++D+ +F+++ R +ISWN +++ YA++GL AVQ + +
Sbjct: 339 LGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDG 398
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+ T +LN + D LK G++ H I + ++D I+ ++LL+MYG+ G + +
Sbjct: 399 VKPDNVTCVGLLNVCTGSAD--LKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQ 456
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF+ +++ +WTA+++A +R + + F + GV+P ITFL L C
Sbjct: 457 AEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVG 516
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
+ KGR + ++ + + S +V M GR G + +A+
Sbjct: 517 AEALGKGRLVHSCAVQSGN-DTDVSLGSALVAMYGRCGSIRDAK 559
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 196/639 (30%), Positives = 339/639 (53%), Gaps = 29/639 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K + A +F+ + + +V WN +++ + + D A+ M L GV +
Sbjct: 142 LHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAER 201
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVY-------VGNALITMYSRWGRLVE 110
+T+ L C L L++ L VK ++ + AL+ Y G L +
Sbjct: 202 ITFIGVLDAC----SKLKDLEVAKL-VKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQ 256
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A R F + + A+++ YTQ + EA+ M+ +G++LD ++ + +AC
Sbjct: 257 AFRAFSRH-RLELILATAMITQYTQRERWD-EALELFKVMLLEGVKLDRIACMAVLNACS 314
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ LE G+ IHG ++ + HV+ GN L++ Y KC +A +VFR M R+VISW T
Sbjct: 315 GPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNT 374
Query: 231 MISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I+ + +A+ L M+LDGV + ++F+ + + + +GRMIH +++
Sbjct: 375 IIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESG 434
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA-QNGLSLAAVQAF 344
++ + N ++ MY +S D+ +VF + R+ +SWNA+I+ YA Q LS A+ F
Sbjct: 435 IKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLF 494
Query: 345 FGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + P+ +F V A SL G+ H I + GL+S+ V +A+L+MY
Sbjct: 495 QQMQLHGFMPDVISF--VAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYA 552
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K GS+ ++++F + +W +ISA A+HG + V+ F+ M ++G P+ +TF+S
Sbjct: 553 KSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVS 612
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYH-IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
V++ C G++ G LF S+L D+ I P +HY CMVD++ R G+L+ AE+ + P
Sbjct: 613 VVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPL 672
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
P + ++LGA ++H +VE + A+ LM++ P S +YV++SNLY E G + A +
Sbjct: 673 KPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKI 732
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRS 621
R+ M K +RKE FS V +H F +GD T+ R+
Sbjct: 733 RRLMYEKNIRKEPAFSSIAVK--RRVHEFFTGDTTNART 769
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 209/431 (48%), Gaps = 19/431 (4%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y+ L D G ++H+ I K +D ++G+ L+ MY G L++A+ FD MP
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN-LELG 178
+D+++W ++ + Q GD +A+ M +G+ + +F + AC + LE G
Sbjct: 61 VQDALTWARLIRAHGQIGD-SEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEG 119
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
++IHGV + V L+ Y KC DA KVF + + V+ W MI+
Sbjct: 120 RRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQ 179
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT---NFLSEP 290
+ E A+ +F M L+GV +TFIG++ A S ++ +++ LC++ + L +
Sbjct: 180 DHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLV-KLCVEEREHDHLHDS 238
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCR--EIISWNALISGYAQNGLSLAAVQAFFGVI 348
S L+ Y S D E+ F S E+I A+I+ Y Q A++ F ++
Sbjct: 239 SFATALVNFYG---SCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVML 295
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
E K + +VLNA L+ G+ H + ++ D G+AL++MYGK GS
Sbjct: 296 LEGVKLDRIACMAVLNACSGPR--GLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGS 353
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ E+ VF Q + +W II+A +H + ++ M+ GV+ D I+F++ L +
Sbjct: 354 LEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPL 413
Query: 468 CGRNGMIHKGR 478
C + + KGR
Sbjct: 414 CAASEALAKGR 424
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 8/166 (4%)
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
+ +L+ V A+ SL G+ H+ I K +D P +G L+ MY GS+ +++ F+
Sbjct: 1 YADLLDVV--ADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDR 58
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG-MIHK 476
+ W +I A + GD E ++ F+ M+ +GV P + F++VL C + ++ +
Sbjct: 59 MPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEE 118
Query: 477 GRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
GR + +L+ +E DHY + ++ M G+ +E+A ++ I
Sbjct: 119 GRRIH-GVLRGTAME--SDHYVSTTLLHMYGKCSSVEDARKVFDGI 161
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 193/614 (31%), Positives = 326/614 (53%), Gaps = 18/614 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD----ALSFALRMNLIGVVFD 56
+++Y G + A +F+ + NPD+ SW ++ + +D + R+ +D
Sbjct: 78 VSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYD 137
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
V +S L C + G +LH IVK G + +V L+ MY++ + ++RRVFD
Sbjct: 138 NVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFD 196
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNL 175
E+ +++ V W +++ GY Q+ ++ L L MR+GL + + S +AC L
Sbjct: 197 EILDRNVVCWTSMIVGYVQND--CLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGAL 254
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
GK +HG IK G+ + + L+ Y KC DA VF + +++SWT MI
Sbjct: 255 HQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGY 314
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A+ LF + R + PN VT ++ A + + GR +H L IK +
Sbjct: 315 AQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGS-EDA 373
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ N L+ MYA+ + D+ VF+ + +++I+WN++ISGY QNG + A++ F + +
Sbjct: 374 TFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSD 433
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSI 408
S P+A T SVL+A + + + G H + IK GL S + VG+ALL+ Y K G
Sbjct: 434 SVYPDAITLVSVLSACASVG--AYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDA 491
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ +F+E EK+ W+A+I GD + F +M + + P+ + F ++L+ C
Sbjct: 492 ESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSAC 551
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+GM+ +G F++M + Y+ PS HY+CMVD+L R GRLEEA + + +IP P +S+
Sbjct: 552 SHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSL 611
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
L + L CR+H ++GE ++++ P + YVLMSNLYA +G W + + MK
Sbjct: 612 LGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQ 671
Query: 589 KGVRKEVGFSWADV 602
+G+ K G+S D+
Sbjct: 672 RGLAKLPGWSLVDI 685
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 145/490 (29%), Positives = 239/490 (48%), Gaps = 17/490 (3%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
++H+L+V GL ++ L+++Y +G + AR +FD + N D SW ++ Y +
Sbjct: 57 KIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLND 116
Query: 138 DYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY-GTHVS 195
Y E + +RK L D+V F+ AC + + G+++H +K+G + V
Sbjct: 117 SYS-EIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVGSPDSFVL 175
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDG 250
G L+ Y+KC D+ +VF + DRNV+ WT+MI + ++ + LF MR
Sbjct: 176 TG--LVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGL 233
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V N T L+ A + + +G+ +HG IK+ F + L+ +Y + ++D+
Sbjct: 234 VEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAF 293
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTFGSVLNAVGAAE 369
VFDELS +++SW A+I GYAQ G A++ F K+ PN T SVL+A A+
Sbjct: 294 SVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSA--CAQ 351
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL G+ H IK+G D +AL+DMY K I +++ VF +K AW +I
Sbjct: 352 TGSLNMGRSVHCLGIKLG-SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSI 410
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
IS ++G + F +M + V PD+IT +SVL+ C G G L +K
Sbjct: 411 ISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGL 470
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG-ERI 548
+ S + +++ + G E A + ++ G +++G I G+ E
Sbjct: 471 LSGSVYVGTALLNFYAKCGDAESARVIFDEM-GEKNTITWSAMIGGYGIQGDCSRSLELF 529
Query: 549 ADALM-KMEP 557
D L K+EP
Sbjct: 530 GDMLKEKLEP 539
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
++ H+ ++ GL D + + L+ +YG G + ++ +F+ + ++W +I +
Sbjct: 56 RKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLN 115
Query: 437 GDYESVMNQFKEMENKGVRP-DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
Y ++ + K + D++ F VL C +GR L ++K SPD
Sbjct: 116 DSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVK----VGSPD 171
Query: 496 HY--SCMVDMLGRVGRLEEAEELVGQI 520
+ + +VDM + +E++ + +I
Sbjct: 172 SFVLTGLVDMYAKCREVEDSRRVFDEI 198
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 207/653 (31%), Positives = 324/653 (49%), Gaps = 40/653 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK------SDDALSFALRMNLIGVV 54
+N Y K GQ KA IFN + D+VSWN++++G+ + S + M ++
Sbjct: 58 VNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDIL 117
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWG--RLVEAR 112
+A T + + G Q H+L+VK ++YV +L+ MY + G L
Sbjct: 118 PNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLKYLYMVY 177
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
F KD + +++ + +E K D+V FT+ S+
Sbjct: 178 YGFWLCYKKDVLRRQ-------------LKSSICFLEEKEKESDSDYV-FTAVLSSLAAT 223
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ LG+QIHG+++K G V++ N L++ YSKCE +A K+F DRN I+W+ M+
Sbjct: 224 VYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 283
Query: 233 ---SMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S N E +A+ LF M G+ P++ T +G+++A S + EG+ +H +K F
Sbjct: 284 TGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFE 343
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN-----GLSLAAVQ 342
L+ MYA+ + D+ K FD L R++ W +LISGY QN L L
Sbjct: 344 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 403
Query: 343 AFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
G+I PN T SVL A + + L G++ H H IK G + +GSAL MY
Sbjct: 404 KTAGII----PNDPTMASVLKACSSLATLEL--GKQVHGHTIKHGFGLEVPIGSALSTMY 457
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K GS+ + VF T K +W A+IS L+ +G + + F+EM +G PD +TF+
Sbjct: 458 TKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFV 517
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
++++ C G + +G F M + ++P DHY+CMVD+L R G+L+E +E +
Sbjct: 518 NIISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEFIESASI 577
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
GL + + LL AC+ HGN E+G + LM + S +YV ++ +Y G V +
Sbjct: 578 DHGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSRESSTYVQLAGIYTALGRMRDVERV 637
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
K M++ GV KEVG SW + + H F GD HPR EE + + +M
Sbjct: 638 WKLMRTNGVSKEVGCSW--IALKNQWHVFVVGDTMHPRIEETKDLVSLVSRQM 688
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 234/464 (50%), Gaps = 16/464 (3%)
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
AL+ H + G +H+ I++ G + N L+ Y++ G+L +A +F+ + KD
Sbjct: 22 ALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKD 81
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV--SFTSAA--SACGHEKNLELG 178
VSWN++++GY+Q+G G+ + ++++ R+ D + ++T A A ++ +G
Sbjct: 82 VVSWNSLITGYSQNG--GISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVG 139
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED 238
+Q H + +KM + V L+ Y K + ++ + + ++ +
Sbjct: 140 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGL----KYLYMVYYGFWLCYKKDVLRRQLKS 195
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
++ +E + +D F ++ +++ V GR IHG+ +K L ++ N L+T
Sbjct: 196 SICFLEEKEKES--DSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVT 253
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYT 357
MY++ ES+ ++ K+FD R I+W+A+++GY+QNG SL A++ F + KP+ YT
Sbjct: 254 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYT 313
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
VLNA ++ L G++ HS ++K+G + +AL+DMY K G + ++++ F+
Sbjct: 314 IVGVLNA--CSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDC 371
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
QE+ WT++IS ++ D E + ++ M+ G+ P+ T SVL C + G
Sbjct: 372 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 431
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ + +K P S + M + G LE+ + + P
Sbjct: 432 KQVHGHTIKHGFGLEVPIG-SALSTMYTKCGSLEDGNLVFRRTP 474
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 298/556 (53%), Gaps = 14/556 (2%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H+ ++K S+V+VG A + M+ + + A +VF+ MP +D+ +WNA+LSG+ Q G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG- 132
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+ +A EM + D V+ + + EK+L+L + +H V I++G V+V N
Sbjct: 133 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 199 VLMSTYSKCEVTGDANKVFRRMH--DRNVISWTTMISM-----NREDAVSLFKEMRLDGV 251
+STY KC A VF + DR V+SW +M DA L+ M +
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ TFI L + + +GR+IH I + N I+MY++ E +
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 312
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAED 370
+FD ++ R +SW +ISGYA+ G A+ F +IK KP+ T S+++ G
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG- 371
Query: 371 ISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL+ G+ + G D + + +AL+DMY K GSI E++ +F+ T EK+ WT +
Sbjct: 372 -SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTM 430
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I+ A +G + + F +M + +P+ ITFL+VL C +G + KG F M + Y+
Sbjct: 431 IAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 490
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I P DHYSCMVD+LGR G+LEEA EL+ + P + +LL AC+IH NV++ E+ A
Sbjct: 491 ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAA 550
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
++L +EP + YV M+N+YA G W+ A +R MK + ++K G S V + H
Sbjct: 551 ESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN--H 608
Query: 610 GFSSGDNTHPRSEEIY 625
F+ G++ H +E IY
Sbjct: 609 SFTVGEHGHVENEVIY 624
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 226/456 (49%), Gaps = 29/456 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M+ K D A +F + D +WN +LSGF +S D A S M L + D+
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT T + + +H++ ++ G+D +V V N I+ Y + G L A+ VF+
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 118 MPNKDS--VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ D VSWN++ Y+ G+ +A M+R+ + D +F + A++C + + L
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGE-AFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETL 272
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G+ IH +I +G + N +S YSK E T A +F M R +SWT MIS
Sbjct: 273 TQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGY 332
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIH------AISIGNLVKEGRMIHGLCIKT 284
E +A++LF M G P+ VT + LI ++ G + I+G C +
Sbjct: 333 AEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG-CKRD 391
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
N + +CN LI MY++ S+ ++ +FD + +++W +I+GYA NG+ L A++ F
Sbjct: 392 NVM----ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 345 FGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDM 401
+I + KPN TF +VL A A SL+ G + HI+K + P + S ++D+
Sbjct: 448 SKMIDLDYKPNHITFLAVLQA--CAHSGSLEKGWE-YFHIMKQVYNISPGLDHYSCMVDL 504
Query: 402 YGKRGSIFESQRVFNETQEKSEFA-WTAIISALARH 436
G++G + E+ + K + W A+++A H
Sbjct: 505 LGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIH 540
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 194/415 (46%), Gaps = 31/415 (7%)
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
+WN + D VE++L EM R G ++ +F A AC ++ + +H
Sbjct: 19 AWNLQIREAVNRND-PVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDA 239
IK + + V VG + + KC A KVF RM +R+ +W M+ S + + A
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
SLF+EMRL+ + P+ VT + LI + S +K +H + I+ + +V N I+
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 197
Query: 300 YARFESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
Y + + ++ VF+ + R ++SWN++ Y+ G + A + +++E KP+
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
TF ++ + E +L G+ HSH I +G D D + + MY K ++ +F+
Sbjct: 258 TFINLAASCQNPE--TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 315
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
++ +WT +IS A GD + + F M G +PD +T LS+++ CG+ G +
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 477 GRHLFDSMLKDYHIEPSPDHYSC----------MVDMLGRVGRLEEAEELVGQIP 521
G+ I+ D Y C ++DM + G + EA ++ P
Sbjct: 376 GK----------WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/485 (36%), Positives = 286/485 (58%), Gaps = 19/485 (3%)
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
+ S +C K +E GKQ+H ++G + + L++ Y C +A+ +F R+
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 222 DRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
RN+ W MI + E A+SL+ +MR G+ P+ TF ++ A S + ++EG+
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG- 335
IH I++ S+ V LI MYA+ ++ + +VFD++ R+++ WN++++ Y+QNG
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183
Query: 336 ----LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
L+L V AF G+ KP TF V++ +A++ L G+ H + + G +S+
Sbjct: 184 PDESLALCRVMAFNGL----KPTEGTF--VISIAASADNGLLPQGKELHGYSWRHGFESN 237
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
V +AL+DMY K GS+ ++ +F +EK +W A+I+ A HG ++ FKEM+
Sbjct: 238 DKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKG 297
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
K V PD ITF+ VL C G++++G+ F SM+ D++I P+ HY+CM+D+LG GRLE
Sbjct: 298 K-VLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLE 356
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
EA +L+ ++ P V +LL +C+IHGNVEMGE + L+++EP G+YV++SN+YA
Sbjct: 357 EAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYA 416
Query: 572 EKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
+ G W+ VA LR M +KG++K + SW +VG + +H F S D +HP+SE IY +
Sbjct: 417 QAGKWDGVARLRDLMMNKGLKKSIACSWIEVG--NKVHAFLSEDTSHPKSEAIYAELKRT 474
Query: 632 GSEMK 636
G MK
Sbjct: 475 GKLMK 479
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 190/389 (48%), Gaps = 12/389 (3%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y++ L C+ + G QLH+ I + G+ + L+ +Y L A +FD +
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ WN ++ GY +G Y + AI +M GL D +F AC +E GK
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYEL-AISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGK 122
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM----- 234
+IH I+ G + V VG L+ Y+KC A +VF ++ +R+V+ W +M++
Sbjct: 123 KIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNG 182
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+++++L + M +G+ P + TF+ I A + L+ +G+ +HG + F S V
Sbjct: 183 QPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKT 242
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPN 354
L+ MYA+ S+ + +F+ L + ++SWNA+I+GYA +G + A+ F + + P+
Sbjct: 243 ALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVLPD 302
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIFESQ 412
TF VL A L + + H + + P V + ++D+ G G + E+
Sbjct: 303 HITFVGVLAACSHG---GLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAY 359
Query: 413 RVFNETQ-EKSEFAWTAIISALARHGDYE 440
++ E + E W A++ + HG+ E
Sbjct: 360 KLIMEMRVEPDAGVWGALLHSCKIHGNVE 388
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 180/340 (52%), Gaps = 16/340 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+N+YC A +F+ ++ ++ WN ++ G+ + A+S +M G+V D
Sbjct: 43 VNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDK 102
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L C G ++H +++ GL+S+V+VG ALI MY++ G + AR+VFD+
Sbjct: 103 FTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDK 162
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
+ +D V WN++L+ Y+Q+G + LAL +M GL+ +F + +A L
Sbjct: 163 IDERDVVCWNSMLATYSQNGQ--PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLP 220
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GK++HG S + G+ ++ V LM Y+K A +F + ++ V+SW MI+
Sbjct: 221 QGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYA 280
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +A+ LFKEM+ V P+ +TF+G++ A S G L+ EG+M H + ++F P+
Sbjct: 281 MHGHANEALDLFKEMK-GKVLPDHITFVGVLAACSHGGLLNEGKM-HFRSMISDFNIWPT 338
Query: 292 V--CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALI 328
V C+I + ++++ K+ E+ + W AL+
Sbjct: 339 VQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALL 378
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/571 (32%), Positives = 309/571 (54%), Gaps = 17/571 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G+QLH+ ++K G S+ + N LI MY++ G+L A VFD MP ++ VSW A++ G+
Sbjct: 23 GVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLH 82
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
G+ E + EM G + + ++ ACG G QIHGV ++ G+ H
Sbjct: 83 HGE-ARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDV 139
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM-RLD 249
V N L+ YSK TGDA +VF + RN+ +W +MIS D++ +F+EM R
Sbjct: 140 VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRH 199
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHG-LCIK-TNFLSEPSVCNCLITMYARFESMQ 307
P++ TF L+ A S +EG +H + ++ + S + L+ +Y + +
Sbjct: 200 DEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLP 259
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGA 367
+ +VFD L R I W +I G+AQ G A+ F + G VL++V A
Sbjct: 260 VAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFR---RFWSSGVRADGHVLSSVVA 316
Query: 368 A-EDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
D +L + G++ H + K D V ++L+DMY K G E+ R F E ++ +
Sbjct: 317 VFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVS 376
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
WTA+I+ + +HG ++ F+EM+ +GV D + +L++L+ C +G++ + R F +
Sbjct: 377 WTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRIC 436
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+D + P +HY+CMVD+LGR G L EA+EL+ +P P + V Q+LL ACR+H +V +G
Sbjct: 437 QDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVG 496
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
+ D L+ ++ +YV++SN+ AE G+W +R M+ KG+RK+ G SW +V D
Sbjct: 497 REVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEV-DK 555
Query: 606 DGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ + GD+ HP++ +I R + + M+
Sbjct: 556 EVHFFYGGGDDAHPQAGDIRRALREVEARMR 586
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 168/327 (51%), Gaps = 21/327 (6%)
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
ASA G +L G Q+H +K+G+G+ + N L+ Y+KC A +VF M +RNV
Sbjct: 13 ASARG--SSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNV 70
Query: 226 ISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+SWT ++ + + LF EMR G PN+ T + A G + G IHG+
Sbjct: 71 VSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGVQIHGV 128
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
C++T F V N L+ MY++ D+ +VFD + R + +WN++ISGYA G +
Sbjct: 129 CVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDS 188
Query: 341 VQAFFGVIK--ESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLD--SDPI 393
+ F + + + +P+ +TF S+L A +GAA + G + H+ + G+ S+ I
Sbjct: 189 LLVFREMQRRHDEQPDEFTFASLLKACSGLGAA-----REGAQVHAAMAVRGVSPASNAI 243
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+ ALLD+Y K + + +VF+ + ++ WT +I A+ G + M F+ + G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHL 480
VR D SV+ V ++ +G+ +
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQV 330
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 213/454 (46%), Gaps = 23/454 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G+ A +F+ + ++VSW ++ GF ++ + L M G +
Sbjct: 46 IDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNE 105
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S L C G G+Q+H + V+ G + V N+L+ MYS+ +ARRVFD
Sbjct: 106 FTLSATLKAC--GGGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDV 163
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
+P+++ +WN+++SGY G G +++L EM R+ + D +F S AC
Sbjct: 164 IPSRNLATWNSMISGYAHAGQ-GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAR 222
Query: 177 LGKQIHGVSIKMGY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
G Q+H G ++ + L+ Y KC A +VF + RN I WTT+I
Sbjct: 223 EGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVG 282
Query: 235 NRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + +A+ LF+ GV + ++ + LV++G+ +H KT +
Sbjct: 283 HAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLD 342
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N L+ MY + ++ + F E+ R ++SW A+I+G ++G A+ F + +
Sbjct: 343 VSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQE 402
Query: 350 ES-KPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
E + + + ++L+A G ++ + C ++ + + ++D+ G+
Sbjct: 403 EGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHY----ACMVDLLGRA 458
Query: 406 GSIFESQR-VFNETQEKSEFAWTAIISALARHGD 438
G + E++ + + E + W ++SA H D
Sbjct: 459 GELREAKELILSMPMEPTVGVWQTLLSACRVHKD 492
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 114/227 (50%), Gaps = 8/227 (3%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
L+ A + G+ ++ G +H +K F S+ + N LI MYA+ + + +VFD + R
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQR 378
++SW AL+ G+ +G + ++ FG ++ S PN +T + L A G + G +
Sbjct: 70 VVSWTALMVGFLHHGEARECLR-LFGEMRGSGTSPNEFTLSATLKACGGG----TRAGVQ 124
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H ++ G + +V ++L+ MY K +++RVF+ ++ W ++IS A G
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184
Query: 439 YESVMNQFKEMENK-GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+ F+EM+ + +PD TF S+L C G +G + +M
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAM 231
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 216/673 (32%), Positives = 336/673 (49%), Gaps = 92/673 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++ + ++G D ALC+F+ + + VS+N ++SG+ ++ F+L +L FD + +
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRN---AKFSLARDL----FDKMPH 92
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S+ N ++T Y+R RL +AR +FD MP
Sbjct: 93 KDLFSW-----------------------------NLMLTGYARNRRLRDARMLFDSMPE 123
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
KD VSWNA+LSGY + G EA M K + +S+ +A LE ++
Sbjct: 124 KDVVSWNAMLSGYVRSGHVD-EARDVFDRMPHK----NSISWNGLLAAYVRSGRLEEARR 178
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-- 238
+ + + N LM Y K + GDA ++F ++ R++ISW TMIS +D
Sbjct: 179 L----FESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGD 234
Query: 239 ---AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
A LF+E + V T+ +++A ++ E R + + +S N
Sbjct: 235 LSQARRLFEESPVRDV----FTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSY----NV 286
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNA 355
+I YA+++ M ++F+E+ I SWN +ISGY QNG LA + F ++ + +
Sbjct: 287 MIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNG-DLAQARNLFDMMPQRDSVS 345
Query: 356 YTF------------------------GSVLN------AVGAAEDIS-LKHGQRCHSHII 384
+ G LN A+ A DI+ L+ G++ H ++
Sbjct: 346 WAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVV 405
Query: 385 KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMN 444
+ G + +VG+AL+ MY K G I E+ VF Q K +W +++ ARHG +
Sbjct: 406 RTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALT 465
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDML 504
F+ M GV+PD IT + VL+ C G+ +G F SM KDY I P+ HY+CM+D+L
Sbjct: 466 VFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLL 525
Query: 505 GRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYV 564
GR G LEEA+ L+ +P P + +LLGA RIHGN+E+GE+ A+ + KMEP SG YV
Sbjct: 526 GRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYV 585
Query: 565 LMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
L+SNLYA G W V+ +R M+ GV+K G+SW +V + +H F+ GD HP I
Sbjct: 586 LLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQ--NKIHTFTVGDCFHPEKGRI 643
Query: 625 YRMAECLGSEMKY 637
Y E L +MK+
Sbjct: 644 YAFLEELDLKMKH 656
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 199/588 (33%), Positives = 328/588 (55%), Gaps = 19/588 (3%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
YS+ + C+ + ++ S +K G + GN LI Y + G +V AR+VFDE+P
Sbjct: 80 YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 137
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++ V+WN++++ Y ++G EAI M+ G+ D +F+S A + G+
Sbjct: 138 HRHIVAWNSMIASYIRNGR-SKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQ 196
Query: 180 QIHGVSIKMGYG-THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN 235
+ HG S+ +G G ++V VG+ L+ Y+K DA V ++ ++V+ +T +I S +
Sbjct: 197 RAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHH 256
Query: 236 REDAVSL--FKEMRLDGVCPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLSEPS 291
ED SL F+ M G+ N+ T ++ + GNL + GR+IHGL +K S +
Sbjct: 257 GEDGESLQVFRNMTKKGIEANEYTLSSVL--VCCGNLEDLTSGRLIHGLIVKAGLESAVA 314
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
L+TMY R + DS KVF + ++W ++I G QNG A+ F +++ S
Sbjct: 315 SQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSS 374
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
PN++T SVL A + L+ G++ H+ ++K GLD D VG+AL+D YGK GS
Sbjct: 375 ITPNSFTLSSVLRACSSLA--MLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEI 432
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VFN E + ++I + A++G + F M++ G+ P+++T+L VL+ C
Sbjct: 433 ARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNN 492
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G H+F S +IE + DHY+CMVD+LGR GRL+EAE L+ Q+ + + +
Sbjct: 493 AGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQV-NISDVVIWR 551
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL ACRIHG+VEM +R+ + ++ + P G++VL+SNLYA G+W V ++ M+
Sbjct: 552 TLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMR 611
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
++K SW DV +H F +GD +HP +I E L ++K L
Sbjct: 612 LKKNPAMSWVDVE--REIHTFMAGDWSHPNFRDIREKLEELIEKVKEL 657
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 244/468 (52%), Gaps = 27/468 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++ Y K G A +F+ + + IV+WN++++ + +S +A+ RM G++ D
Sbjct: 117 IDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDE 176
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD-SEVYVGNALITMYSRWGRLVEARRVFD 116
T+S+ D G + H V G+ S V+VG+AL+ MY+++G++ +AR V D
Sbjct: 177 FTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSD 236
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
++ KD V + A++ GY+ G+ G E++ M +KG+ + + +S CG+ ++L
Sbjct: 237 QVVGKDVVLFTALIVGYSHHGEDG-ESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLT 295
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---S 233
G+ IHG+ +K G + V+ L++ Y +C + D+ KVF++ + N ++WT++I
Sbjct: 296 SGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLV 355
Query: 234 MNREDAVSL--FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N + ++L F++M + PN T ++ A S ++++G+ IH + +K +
Sbjct: 356 QNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKY 415
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V LI Y + S + + VF+ L +++S N++I YAQNG A+Q F G +K++
Sbjct: 416 VGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSG-MKDT 474
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV-----GSALLDMYGK 404
+PN T+ VL+A A L+ G HI +S I + ++D+ G+
Sbjct: 475 GLEPNNVTWLGVLSACNNAG--LLEEG----CHIFSSARNSGNIELTKDHYACMVDLLGR 528
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE---SVMNQFKEM 449
G + E++ + N+ W ++SA HGD E VMN+ ++
Sbjct: 529 AGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVIDL 576
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/542 (34%), Positives = 295/542 (54%), Gaps = 12/542 (2%)
Query: 101 MYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
MYS+ A+ + P + V+W A++SG Q+G Y A+L +M R+ ++ +
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNG-YFSSALLYFSKMRRENIKPNDF 59
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+F A A GKQIH +++K+G VG YSK + +A ++F M
Sbjct: 60 TFPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEM 119
Query: 221 HDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
RNV W IS D A+ F E R G P+ +TF ++A + + GR
Sbjct: 120 PPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGR 179
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
+HGL I++ F + SV N +I +Y + + ++ +E VF+ + R +SW +++ QN
Sbjct: 180 QLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQND 239
Query: 336 LSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
A F KE + Y SV++A L+ G+ H+ +K ++ D V
Sbjct: 240 EKEKACVVFLMGRKEGIELTDYMVSSVISAYAGIS--GLEFGRSVHALAVKACVEGDIFV 297
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
GSAL+DMYGK GSI + ++VF+E E++ +W A+IS A GD + M F+EM+++ V
Sbjct: 298 GSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV 357
Query: 455 RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
+ +T + VL+ C R G + G +F+SM Y IEP +HY+C+ DMLGR G +E A
Sbjct: 358 -ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAY 416
Query: 515 ELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKG 574
E V ++P P +SV +LL ACR++G E+G+ AD L K++P SG++VL+SN++A G
Sbjct: 417 EFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAG 476
Query: 575 DWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSE 634
W+ ++RK MK G++K G SW V + +H F + D +H R+ EI M L +E
Sbjct: 477 RWDEATLVRKEMKDVGIKKGAGCSW--VTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTE 534
Query: 635 MK 636
M+
Sbjct: 535 MQ 536
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 232/502 (46%), Gaps = 56/502 (11%)
Query: 25 IVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTAL----SFCLDHEGFLFGL 77
+V+W ++SG ++ AL + +M + + T+ A + CL G
Sbjct: 23 VVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLP----FAGK 78
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H++ +K G ++ +VG + MYS+ G EA+R+FDEMP ++ WNA +S DG
Sbjct: 79 QIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDG 138
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
G +AI IE R G D ++F + +AC + L+LG+Q+HG+ I+ G+ VSV
Sbjct: 139 RPG-KAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVA 197
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVC 252
N ++ Y KC+ A VF M RN +SW TM++ +E A +F R +G+
Sbjct: 198 NGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIE 257
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
D +I A + + ++ GR +H L +K + V + L+ MY + S++D E+V
Sbjct: 258 LTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQV 317
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDIS 372
F E+ R ++SWNA+ISGYA G A+ F + E+ N T VL+A +
Sbjct: 318 FHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVANYVTLICVLSACSRGGAVK 377
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L + IFES R + +E + I
Sbjct: 378 LGN-------------------------------EIFESMRDRYRIEPGAEH-YACIADM 405
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
L R G E ++M +RP + ++L C G G+ D++ K ++P
Sbjct: 406 LGRAGMVERAYEFVQKMP---IRPTISVWGALLNACRVYGEPELGKIAADNLFK---LDP 459
Query: 493 SPD-HYSCMVDMLGRVGRLEEA 513
++ + +M GR +EA
Sbjct: 460 KDSGNHVLLSNMFAAAGRWDEA 481
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 182/387 (47%), Gaps = 17/387 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+MY K+G +A +F+ + ++ WN +S + A+ + +G D
Sbjct: 100 FDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDL 159
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ L+ C D G QLH L+++ G + +V V N +I +Y + + A VF+
Sbjct: 160 ITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNG 219
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++SVSW +++ Q+ D +A + + ++G+ L +S SA LE
Sbjct: 220 MGRRNSVSWCTMVAACEQN-DEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEF 278
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+ +H +++K + VG+ L+ Y KC D +VF M +RN++SW MIS
Sbjct: 279 GRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAH 338
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + A++LF+EM+ + V N VT I ++ A S G VK G I ++ + EP
Sbjct: 339 QGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEIFE-SMRDRYRIEPGA 396
Query: 293 CN--CLITMYARFESMQDSEKVFDELSCREIIS-WNALISG---YAQNGLSLAAVQAFFG 346
+ C+ M R ++ + + ++ R IS W AL++ Y + L A F
Sbjct: 397 EHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFK 456
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISL 373
+ + N ++ A G ++ +L
Sbjct: 457 LDPKDSGNHVLLSNMFAAAGRWDEATL 483
>gi|302756099|ref|XP_002961473.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
gi|300170132|gb|EFJ36733.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
Length = 643
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 313/593 (52%), Gaps = 18/593 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ Y K G A +F+ + +I SW +L + + +AL + G+ D
Sbjct: 54 VQAYGKCGSVRDAREVFDRIQRRNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDN 113
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT +AL C G +H+ G +SE+ V AL++MY + G L EA+ VF
Sbjct: 114 VTLVSALKACAVAGDLEEGRGIHASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFAT 173
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ VSWNA+L+ Y Q+G + EA+ M +G++ D +F S G + E
Sbjct: 174 LVERNRVSWNAMLAAYAQNG-HCEEAVRLYRLMCFEGIKPDATTFVSVLD--GWKGEGEH 230
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G +IH ++ G+G++ ++ N L+S Y DA VF + ++ V+SW M++ +
Sbjct: 231 GTRIHDQVLESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQ 290
Query: 238 D-----AVSLF---KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ AV LF EMR V PN VTF+ L+ A + ++ GR IH LS
Sbjct: 291 NGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLST 350
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV LI MY+ ++ ++ VFD + + ++SWN LI YA +G A+ +
Sbjct: 351 LSVGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMEL 410
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E KP+ +TF SVL+A A+E +L G+ H+ I GL+ D +G+AL+++YGK GS+
Sbjct: 411 EGLKPDKFTFISVLHACSASE--ALAEGKAIHALIAASGLERDEAIGTALINLYGKCGSL 468
Query: 409 FESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+++ VF + + + W ++++A G E + M +G+ PD +TFLSVL
Sbjct: 469 EQARNVFLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMPDELTFLSVLFA 528
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G I +G LF S DY I + HY C+VD+LGRVGRLEEA+E++ ++P
Sbjct: 529 CSHGGSIQQGLDLFLSAGVDYGIATNTKHYVCVVDILGRVGRLEEAQEVLNRMPFQANDV 588
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVA 580
+LLGACRIH + E G R AD +++++P + Y L+S +++ G M A
Sbjct: 589 AWMTLLGACRIHRDFEQGRRAADYVIELDPQNAAPYALLSTMFSVAGRGRMPA 641
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 257/494 (52%), Gaps = 15/494 (3%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
++++ L C Q I + G + Y+GN L+ Y + G + +AR VFD +
Sbjct: 14 SHASILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRI 73
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
++ SW +L Y +G +G EA+ E+ +G+ +D+V+ SA AC +LE G
Sbjct: 74 QRRNIFSWTIMLGAYADNG-HGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEG 132
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+ IH + +GY + + V L+S Y KC +A VF + +RN +SW M++
Sbjct: 133 RGIHASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQN 192
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ E+AV L++ M +G+ P+ TF+ ++ + G IH +++ F S ++
Sbjct: 193 GHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWK--GEGEHGTRIHDQVLESGFGSNTTLA 250
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK- 352
N L++MY + D+ VFD ++ + ++SWNA+++ YAQNG AV F+ + + +
Sbjct: 251 NALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRA 310
Query: 353 ---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
PN+ TF ++L V A L+ G++ H+ + +GL S VG AL++MY + G++
Sbjct: 311 LVEPNSVTFVNLL--VACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSECGNLV 368
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ VF+ K+ +W +I + A GD + + ++ME +G++PD TF+SVL C
Sbjct: 369 LAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACS 428
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+ + +G+ + +++ +E + ++++ G+ G LE+A + + L
Sbjct: 429 ASEALAEGKAIH-ALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTW 487
Query: 530 QSLLGACRIHGNVE 543
S+L A G +E
Sbjct: 488 NSMLAAACTKGGLE 501
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 249/501 (49%), Gaps = 36/501 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G ++A +F L + VSWN +L+ + ++ ++A+ M G+ DA
Sbjct: 155 VSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKPDA 214
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L EG G ++H +++ G S + NAL++MY GR+ +AR VFD
Sbjct: 215 TTFVSVLD-GWKGEG-EHGTRIHDQVLESGFGSNTTLANALVSMYGSGGRVDDARYVFDG 272
Query: 118 MPNKDSVSWNAILSGYTQDGDYG--VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ K VSWNA+L+ Y Q+G YG V+ + EM R + + V+F + AC L
Sbjct: 273 IAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFL 332
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
E G++IH +G + +SVG L++ YS+C A VF + +N++SW +I
Sbjct: 333 EAGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSY 392
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ ++A+ + ++M L+G+ P+ TFI ++HA S + EG+ IH L + +
Sbjct: 393 AGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASGLERDE 452
Query: 291 SVCNCLITMYARFESMQDSEKVF-DELSCREIISWNALISGYAQNG-----LSLAAVQAF 344
++ LI +Y + S++ + VF D S R +++WN++++ G + + +
Sbjct: 453 AIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGL 512
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS----ALLD 400
G++ P+ TF SVL A I Q+ + G+D + ++D
Sbjct: 513 EGIM----PDELTFLSVLFACSHGGSI-----QQGLDLFLSAGVDYGIATNTKHYVCVVD 563
Query: 401 MYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYES---VMNQFKEMENKGVRP 456
+ G+ G + E+Q V N + ++ AW ++ A H D+E + E++ + P
Sbjct: 564 ILGRVGRLEEAQEVLNRMPFQANDVAWMTLLGACRIHRDFEQGRRAADYVIELDPQNAAP 623
Query: 457 DSITFLSVLTVCGRNGMIHKG 477
++ ++ +V GR M KG
Sbjct: 624 YAL-LSTMFSVAGRGRMPAKG 643
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 5/221 (2%)
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
+ S+L +A D L ++ I + G D +G+ L+ YGK GS+ +++ VF+
Sbjct: 14 SHASILRDCASARD--LTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFD 71
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
Q ++ F+WT ++ A A +G + F+E++++G+ D++T +S L C G + +
Sbjct: 72 RIQRRNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEE 131
Query: 477 GRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGAC 536
GR + S + E + +V M G+ G LEEA+ + + +S ++L A
Sbjct: 132 GRGIHASA-RSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVS-WNAMLAAY 189
Query: 537 RIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
+G+ E R+ LM E + +S L KG+ E
Sbjct: 190 AQNGHCEEAVRLYR-LMCFEGIKPDATTFVSVLDGWKGEGE 229
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/571 (32%), Positives = 309/571 (54%), Gaps = 17/571 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G+QLH+ ++K G S+ + N LI MY++ G+L A VFD MP ++ VSW A++ G+
Sbjct: 219 GVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLH 278
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
G+ E + EM G + + ++ ACG G QIHGV ++ G+ H
Sbjct: 279 HGE-ARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDV 335
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM-RLD 249
V N L+ YSK TGDA +VF + RN+ +W +MIS D++ +F+EM R
Sbjct: 336 VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRH 395
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHG-LCIK-TNFLSEPSVCNCLITMYARFESMQ 307
P++ TF L+ A S +EG +H + ++ + S + L+ +Y + +
Sbjct: 396 DEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLP 455
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGA 367
+ +VFD L R I W +I G+AQ G + F S A G VL++V A
Sbjct: 456 VAMQVFDGLERRNAIQWTTVIVGHAQEG-QVKEAMCLFRRFWSSGVRAD--GHVLSSVVA 512
Query: 368 A-EDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
D +L + G++ H + K D V ++L+DMY K G E+ R F E ++ +
Sbjct: 513 VFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVS 572
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
WTA+I+ + +HG ++ F+EM+ +GV D + +L++L+ C +G++ + R F +
Sbjct: 573 WTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRIC 632
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+D + P +HY+CMVD+LGR G L EA+EL+ +P P + V Q+LL ACR+H +V +G
Sbjct: 633 QDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVG 692
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
+ D L+ ++ +YV++SN+ AE G+W +R M+ KG+RK+ G SW +V D
Sbjct: 693 REVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEV-DK 751
Query: 606 DGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ + GD+ HP++ +I R + + M+
Sbjct: 752 EVHFFYGGGDDAHPQAGDIRRALREVEARMR 782
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 176/349 (50%), Gaps = 25/349 (7%)
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
+L + M R+ + D + ++ S+ L G Q+H +K+G+G+ + N L+
Sbjct: 191 LLGFLPMERRRMIADLLRASARGSS------LRGGVQLHAALMKLGFGSDTMLNNNLIDM 244
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTF 258
Y+KC A +VF M +RNV+SWT ++ + + LF EMR G PN+ T
Sbjct: 245 YAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTL 304
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC 318
+ A G + G IHG+C++T F V N L+ MY++ D+ +VFD +
Sbjct: 305 SATLKACGGGT--RAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPS 362
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNA---VGAAEDISL 373
R + +WN++ISGYA G ++ F + + + +P+ +TF S+L A +GAA
Sbjct: 363 RNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAA----- 417
Query: 374 KHGQRCHSHIIKVGLD--SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
+ G + H+ + G+ S+ I+ ALLD+Y K + + +VF+ + ++ WT +I
Sbjct: 418 REGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIV 477
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
A+ G + M F+ + GVR D SV+ V ++ +G+ +
Sbjct: 478 GHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQV 526
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 212/454 (46%), Gaps = 23/454 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G+ A +F+ + ++VSW ++ GF ++ + L M G +
Sbjct: 242 IDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNE 301
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S L C G G+Q+H + V+ G + V N+L+ MYS+ +ARRVFD
Sbjct: 302 FTLSATLKAC--GGGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDV 359
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
+P+++ +WN+++SGY G G +++L EM R+ + D +F S AC
Sbjct: 360 IPSRNLATWNSMISGYAHAGQ-GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAR 418
Query: 177 LGKQIHGVSIKMGY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
G Q+H G ++ + L+ Y KC A +VF + RN I WTT+I
Sbjct: 419 EGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVG 478
Query: 235 NRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + +A+ LF+ GV + ++ + LV++G+ +H KT +
Sbjct: 479 HAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLD 538
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N L+ MY + ++ + F E+ R ++SW A+I+G ++G A+ F +
Sbjct: 539 VSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQA 598
Query: 350 ES-KPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
E + + + ++L+A G ++ + C ++ + + ++D+ G+
Sbjct: 599 EGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHY----ACMVDLLGRA 654
Query: 406 GSIFESQR-VFNETQEKSEFAWTAIISALARHGD 438
G + E++ + + E + W ++SA H D
Sbjct: 655 GELREAKELILSMPMEPTVGVWQTLLSACRVHKD 688
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 205/644 (31%), Positives = 349/644 (54%), Gaps = 42/644 (6%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTA 63
Y ++G+ ++AL +F + VS+N ++SG+ ++ + L +FD +
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGE-------FELARKLFDEMPERDL 126
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGL--DSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
+S+ + +G++ L F + + +V N +++ Y++ G + +AR VFD MP K
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ- 180
+ VSWNA+LS Y Q+ +E L + R+ L VS+ +K + +Q
Sbjct: 187 NDVSWNALLSAYVQNSK--MEEACMLFK-SRENWAL--VSWNCLLGGFVKKKKIVEARQF 241
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNR- 236
++++ V N +++ Y++ +A ++F ++V +WT M+S NR
Sbjct: 242 FDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 237 -EDAVSLFKEMRLDGVCP--NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E+A LF +M P N+V++ ++ G ++ + + + N S
Sbjct: 297 VEEARELFDKM------PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV----STW 346
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SK 352
N +IT YA+ + +++ +FD++ R+ +SW A+I+GY+Q+G S A++ F + +E +
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
N +F S L+ A+ ++L+ G++ H ++K G ++ VG+ALL MY K GSI E+
Sbjct: 407 LNRSSFSSALST--CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN 464
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F E K +W +I+ +RHG E + F+ M+ +G++PD T ++VL+ C G
Sbjct: 465 DLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTG 524
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ KGR F +M +DY + P+ HY+CMVD+LGR G LE+A L+ +P P ++ +L
Sbjct: 525 LVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTL 584
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
LGA R+HGN E+ E AD + MEP SG YVL+SNLYA G W V LR M+ KGV+
Sbjct: 585 LGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVK 644
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
K G+SW ++ + H FS GD HP +EI+ E L MK
Sbjct: 645 KVPGYSWIEIQ--NKTHTFSVGDEFHPEKDEIFAFLEELDLRMK 686
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 177/380 (46%), Gaps = 66/380 (17%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVV-FD 56
++ Y ++ + ++A +F + N +VSWN +L GF K +A F MN+ VV ++
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN 254
Query: 57 AVTYSTALSFCLDHEGFLFG-----------------------LQLHSLIVKFGLDSEVY 93
+ A S +D LF + L K +EV
Sbjct: 255 TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV- 313
Query: 94 VGNALITMY---------------------SRWGRLV----------EARRVFDEMPNKD 122
NA++ Y S W ++ EA+ +FD+MP +D
Sbjct: 314 SWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSW A+++GY+Q G + EA+ ++M R+G RL+ SF+SA S C LELGKQ+H
Sbjct: 374 PVSWAAMIAGYSQSG-HSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLH 432
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR----E 237
G +K GY T VGN L+ Y KC +AN +F+ M ++++SW TMI+ +R E
Sbjct: 433 GRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGE 492
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM-IHGLCIKTNFLSEPSVCNCL 296
A+ F+ M+ +G+ P+D T + ++ A S LV +GR + + + C+
Sbjct: 493 VALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACM 552
Query: 297 ITMYARFESMQDSEKVFDEL 316
+ + R ++D+ + +
Sbjct: 553 VDLLGRAGLLEDAHNLMKNM 572
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 219/476 (46%), Gaps = 43/476 (9%)
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
DS++ N I+ Y R GR EA RVF MP SVS+N ++SGY ++G++ + L
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKL-FD 119
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
EM + D VS+ G+ +N LGK I V N ++S Y++
Sbjct: 120 EMPER----DLVSWNVMIK--GYVRNRNLGKARELFEIMP--ERDVCSWNTMLSGYAQNG 171
Query: 209 VTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIH 263
DA VF RM ++N +SW ++S E+A LFK + V++ L
Sbjct: 172 CVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCL-- 225
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSV-----CNCLITMYARFESMQDSEKVFDELSC 318
+G VK+ +++ F +V N +IT YA+ + ++ ++FDE
Sbjct: 226 ---LGGFVKKKKIVEA----RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQR 378
+++ +W A++SGY QN + A + F K + N ++ ++L E + +
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELF---DKMPERNEVSWNAMLAGYVQGERMEMA---- 331
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
+ V + + ++ Y + G I E++ +F++ ++ +W A+I+ ++ G
Sbjct: 332 --KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGH 389
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS 498
+ F +ME +G R + +F S L+ C + G+ L ++K + E +
Sbjct: 390 SFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY-ETGCFVGN 448
Query: 499 CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
++ M + G +EEA +L ++ G +S + G R HG E+ R +++ +
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR-HGFGEVALRFFESMKR 503
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MYCK G ++A +F + DIVSWNT+++G+ + + AL F M G+ D T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 60 YSTALSFCLDHEGFL-FGLQ-LHSLIVKFGL--DSEVYVGNALITMYSRWGRLVEARRVF 115
LS C H G + G Q +++ +G+ +S+ Y ++ + R G L +A +
Sbjct: 513 MVAVLSAC-SHTGLVDKGRQYFYTMTQDYGVMPNSQHYA--CMVDLLGRAGLLEDAHNLM 569
Query: 116 DEMP-NKDSVSWNAILS-----GYTQDGDYGVEAILAL 147
MP D+ W +L G T+ + + I A+
Sbjct: 570 KNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAM 607
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 306/572 (53%), Gaps = 14/572 (2%)
Query: 74 LFGLQLHSLIVKFGLDS-EVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
+ G +H+ I++ + ++ N L+ MYS+ L A+ V + V+W +++SG
Sbjct: 23 ILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISG 82
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
+ + + A+L M R ++ + +F A + GKQIHG+++K G
Sbjct: 83 CVHNRRF-LPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIY 141
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSL-----FKEMR 247
V VG Y K GDA +F M RN+ +W IS +D SL FKE
Sbjct: 142 DVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFL 201
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
PN +TF ++A + GR +H ++ + + SV N LI Y + +
Sbjct: 202 CVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIV 261
Query: 308 DSEKVFDELSCRE-IISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVG 366
+E VF+ + R+ ++SW ++++ QN A F KE +P + SVL+A
Sbjct: 262 SAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPTDFMISSVLSA-- 319
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
AE L+ G+ H+ +K ++ + VGSAL+DMYGK GSI +++VF+E E++ W
Sbjct: 320 CAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTW 379
Query: 427 TAIISALARHGDYESVMNQFKEME--NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
A+I A GD + + F+EM + G+RP +T +S+L+VC R G + +G +F+SM
Sbjct: 380 NAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESM 439
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+Y IEP +H++C+VD+LGR G ++ A E + + P +SV +LLGACR+HG E+
Sbjct: 440 RLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTEL 499
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
G+ A+ L +++ SG++V++SN+ A G WE ++RK MK G++K VG+SW V
Sbjct: 500 GKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVK- 558
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ +H F + D++H R+ EI M L MK
Sbjct: 559 -NRIHVFQAKDSSHDRNSEIQAMLGKLRGGMK 589
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 241/529 (45%), Gaps = 59/529 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALR---MNLIGVVFDA 57
+NMY K + A + + + +V+W +++SG + L L M V +
Sbjct: 49 VNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPND 108
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + + G Q+H L +K G+ +V+VG + MY + G +A +FDE
Sbjct: 109 FTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDE 168
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ +WNA +S QD ++AI+A E + + ++F + +AC L L
Sbjct: 169 MPQRNLATWNAYISNAVQD-RRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNL 227
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMISM-- 234
G+Q+H ++ GY VSV N L+ Y KC A VF R+ +R NV+SW +M++
Sbjct: 228 GRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALV 287
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E A +F + R + V P D ++ A + ++ GR +H L +K
Sbjct: 288 QNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIF 346
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + L+ MY + S++++E+VF EL R +++WNA+I GYA G A++ F + S
Sbjct: 347 VGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGS 406
Query: 352 ---KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+P+ T S+L+ VGA E R
Sbjct: 407 HGIRPSYVTLISILSVCSRVGAVE-----------------------------------R 431
Query: 406 G-SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G IFES R+ N E + ++ L R G V ++ ++N ++P + ++
Sbjct: 432 GIQIFESMRL-NYGIEPGAEHFACVVDLLGRSG---LVDRAYEFIQNMAIQPTISVWGAL 487
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
L C +G G+ + + + H++ ++ + +ML GR EEA
Sbjct: 488 LGACRMHGKTELGKIAAEKLFELDHVDSG--NHVVLSNMLASAGRWEEA 534
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 184/390 (47%), Gaps = 20/390 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+MYCK+G A +F+ + ++ +WN +S +S DA+ + ++
Sbjct: 150 FDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNS 209
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ L+ C+D G QLH+ IV+ G +V V N LI Y + G +V A VF+
Sbjct: 210 ITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNR 269
Query: 118 MPN-KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ N K+ VSW ++L+ Q+ + E + RK + +S SAC LE
Sbjct: 270 IGNRKNVVSWCSMLAALVQNHEE--ERACMVFLQARKEVEPTDFMISSVLSACAELGGLE 327
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
LG+ +H +++K ++ VG+ L+ Y KC +A +VF + +RN+++W MI
Sbjct: 328 LGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYA 387
Query: 233 -SMNREDAVSLFKEMRL--DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + A+ LF+EM L G+ P+ VT I ++ S V+ G I ++ N+ E
Sbjct: 388 HQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFE-SMRLNYGIE 446
Query: 290 PSVCN--CLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNG---LSLAAVQA 343
P + C++ + R + + + ++ + IS W AL+ +G L A +
Sbjct: 447 PGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEK 506
Query: 344 FFGVIKESKPNAYTFGSVLNAVGAAEDISL 373
F + N ++L + G E+ ++
Sbjct: 507 LFELDHVDSGNHVVLSNMLASAGRWEEATV 536
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 311/555 (56%), Gaps = 14/555 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ I+ GL ++ N+L+ Y G L +A+++F P K+ VSW ++SG ++
Sbjct: 42 QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN- 100
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
D VEAI EM+ + + V+ +S A + + + K +H ++ G+ +V V
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVC 252
L+ YSK G A ++F M +RNV++W ++S E+A+ LF MR G+
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220
Query: 253 PNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
+ T + LI A +S+G L + G IHG I+T + ++ + L+ +Y + D+ +
Sbjct: 221 VDFYTIMSLIPASLSVGCL-QVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHR 279
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV--IKESKPNAYTFGSVLNAVGAAE 369
VF E+S +++ +W +++G++ A++ F + I+ K ++ +L++ +
Sbjct: 280 VFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSS--CSH 337
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+L+ G+R H+ IK ++ VGSA++DMY G++ +++R F EK W A+
Sbjct: 338 SGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAM 397
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I+ +G ++ F +M+ G+ PD TF+SVL C GM+++G +F M+K H
Sbjct: 398 IAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSH 457
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
+ P+ HY+C++D+LGR G+L+ A + +P P V +LLGACRIHGN+++G I+
Sbjct: 458 VIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEIS 517
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
+ +MEP +G YVL+SN+YA G+WE V + R ++SK ++K+ GFS ++ ++
Sbjct: 518 QKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEIN--QEIY 575
Query: 610 GFSSGDNTHPRSEEI 624
F +G+ HP+ +I
Sbjct: 576 TFMAGEKDHPQYFKI 590
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 227/465 (48%), Gaps = 18/465 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
MN Y G A IF++ ++VSW ++SG K+D +A+ M + +A
Sbjct: 63 MNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNA 122
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT S+ L + +H V+ G + V+V AL+ MYS++G + AR++F+
Sbjct: 123 VTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFES 182
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++ V+WNAI+SGY+ G + EAI M RKGL +D + S A L++
Sbjct: 183 MSERNVVTWNAIVSGYSDHG-FSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQV 241
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G IHG I+ GY + LM Y DA++VF M ++V +WT M++
Sbjct: 242 GTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSS 301
Query: 234 -MNREDAVSLFKEMR-LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + A+ F +M + + + + +G++ + S +++GR +H L IKT F +
Sbjct: 302 GRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIF 361
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + +I MYA +++D+++ F + ++++ WNA+I+G NG A+ F +
Sbjct: 362 VGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSG 421
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA-LLDMYGKRGSIF 409
P+ TF SVL A A + G + H++K + A ++D+ G+ G +
Sbjct: 422 LDPDESTFVSVLYACSHAGMVY--EGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLD 479
Query: 410 ESQRVFNETQEKSEF-AWTAIISALARHGDYE---SVMNQFKEME 450
+ N + +F ++ ++ A HG+ + + + EME
Sbjct: 480 AAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEME 524
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 181/351 (51%), Gaps = 10/351 (2%)
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
K+L+ +QIH I G + + N LM+ Y C + DA ++F +NV+SWT +I
Sbjct: 35 KDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILI 94
Query: 233 S-MNRED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S + + D A+ +F+EM + PN VT ++ A + L++ + +H ++ F
Sbjct: 95 SGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFE 154
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
V L+ MY++F M + ++F+ +S R +++WNA++SGY+ +G S A+ F
Sbjct: 155 GNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLF--N 212
Query: 348 IKESKPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ K F ++++ + A+ + L+ G H II+ G ++D + +AL+D+Y
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN-KGVRPDSITFLSVL 465
+ ++ RVF+E K AWT +++ + ++ + F +M + ++ DSI + +L
Sbjct: 273 CVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGIL 332
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ C +G + +GR + +K + S ++DM G LE+A+
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTC-FANNIFVGSAVIDMYANCGNLEDAKRF 382
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 202/652 (30%), Positives = 335/652 (51%), Gaps = 16/652 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y G + +L +F ++ +P++ +N +L + S+ L +M + D
Sbjct: 66 IDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDE 125
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY L C FG +H +VK G D V AL MY A ++FD+
Sbjct: 126 ETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDK 185
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
KD + W + L+ D G M+ + L D +F + +++L
Sbjct: 186 RSVKD-LGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQL 244
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR 236
K +H ++I + V ++S YSK DA K+F +M +++ + W MI+ R
Sbjct: 245 AKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAR 304
Query: 237 E----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E + + LFK M G+ + T + +I +I+ V G+ H ++ S+ SV
Sbjct: 305 EGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSV 364
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N LI MY + + + K+F+ ++ + +ISW+A+I GY +NG SL A+ + F +K
Sbjct: 365 HNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTAL-SLFSKMKSDG 423
Query: 353 PNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
A F ++N + A I +L++ + H + +K+GL S P + +ALL Y K GSI +
Sbjct: 424 IQA-DFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMA 482
Query: 412 QRVFNETQ--EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
QR+F E + +K W ++ISA A HGD+ + M+ +PD +TFL +LT C
Sbjct: 483 QRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACV 542
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+G++ KG+ F M + Y +PS +HY+CMV++LGR G + EA ELV +P P V
Sbjct: 543 NSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVW 602
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
LL AC++H ++ E A+ L+ MEP +G+Y+L+SN+YA G W+ VA +R +++K
Sbjct: 603 GPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNK 662
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSK 641
G++K G SW ++ + F D THPR+ +IY + L E+K + K
Sbjct: 663 GLKKIPGCSWLEIN--GHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREK 712
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 220/446 (49%), Gaps = 12/446 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ + G + + LI Y+ G L + +VF + + + +NAIL T+ G
Sbjct: 45 QIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYG 104
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ +L +M+ K + D ++ +C N+ G+ IHG +K+G+ V
Sbjct: 105 E-SERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVA 163
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM------NREDAVSLFKEMRLDGV 251
L Y +C +A+++F + ++ + W + ++ N E +F M + +
Sbjct: 164 TALAEMYEECIEFENAHQLFDKRSVKD-LGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQL 222
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ TF L+ I+ N ++ +++H + I + + V ++++Y++ S+ D+ K
Sbjct: 223 VPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARK 282
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAED 370
+FD++ ++ + WN +I+ YA+ G ++ F + + + + +T V++++ +
Sbjct: 283 LFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKC 342
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+ G++ H+HI++ G DS V ++L+DMY + + + ++FN +KS +W+A+I
Sbjct: 343 VDW--GKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMI 400
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
++G + ++ F +M++ G++ D + +++L G + ++L +K +
Sbjct: 401 KGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMK-LGL 459
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEEL 516
P + ++ + G +E A+ L
Sbjct: 460 TSLPSLNTALLITYAKCGSIEMAQRL 485
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 152/315 (48%), Gaps = 8/315 (2%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNR- 236
+QIH I G+ + ++ + L+ Y+ + + +VF + D N+ + ++ ++ R
Sbjct: 44 QQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRY 103
Query: 237 ---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E + ++++M + P++ T+ ++ + S + V GR IHG +K F V
Sbjct: 104 GESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVA 163
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
L MY +++ ++FD+ S +++ ++L + QN + F +I E
Sbjct: 164 TALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLV 223
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+++TF ++L + I L C + + K L D +V +A+L +Y K S+ +++
Sbjct: 224 PDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSK--LSGDLLVNTAVLSLYSKLRSLVDAR 281
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
++F++ EK W +I+A AR G + FK M G+R D T L V++ +
Sbjct: 282 KLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLK 341
Query: 473 MIHKGRHLFDSMLKD 487
+ G+ +L++
Sbjct: 342 CVDWGKQTHAHILRN 356
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 97/208 (46%), Gaps = 6/208 (2%)
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
N ++ + IH I F P++ + LI YA + S +VF + + +NA++
Sbjct: 38 NSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAIL 97
Query: 329 SGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
+ G S + + ++ +S P+ T+ VL + + ++ G+ H +++K+G
Sbjct: 98 RNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGF--GRTIHGYLVKLG 155
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY-ESVMNQF 446
D +V +AL +MY + + ++F++ K + W + ++ D E + F
Sbjct: 156 FDLFDVVATALAEMYEECIEFENAHQLFDKRSVK-DLGWPSSLTTEGPQNDNGEGIFRVF 214
Query: 447 KEMENKGVRPDSITFLSVLT-VCGRNGM 473
M + + PDS TF ++L + G N +
Sbjct: 215 GRMIAEQLVPDSFTFFNLLRFIAGLNSI 242
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
S++H Q+ H+ I G +P + S L+D Y G + S +VF + + + AI+
Sbjct: 39 SIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILR 98
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
L R+G+ E + +++M K + PD T+ VL C + GR + ++K
Sbjct: 99 NLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVK 153
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 204/669 (30%), Positives = 345/669 (51%), Gaps = 33/669 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTV------LSGFEKSDDALSFALRMNLIGVV 54
+ + GQ A +F+ + PD ++N + L F + D LR V
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFR---VA 97
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ T+ L C G +H+ GL ++++V ALI +Y R R AR V
Sbjct: 98 PNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNV 157
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEK 173
F +MP +D V+WNA+L+GY G Y AI L++M GLR + + S
Sbjct: 158 FAKMPMRDVVAWNAMLAGYANHGMYH-HAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHG 216
Query: 174 NLELGKQIHGVSIKMGYGT---HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
L G IH ++ V +G L+ Y+KC+ A +VF M RN ++W+
Sbjct: 217 ALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSA 276
Query: 231 MIS----MNR-EDAVSLFKEMRLDGVCPNDVTFIG--LIHAISIGNLVKEGRMIHGLCIK 283
+I +R +A +LFK+M ++G+C T + L S+ +L G +H L K
Sbjct: 277 LIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADL-HMGTQLHALIAK 335
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ ++ + N L++MYA+ + ++ FDE++ ++ IS+ AL+SG QNG A +A
Sbjct: 336 SGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNG---KAEEA 392
Query: 344 FFGVIK----ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F K +P+ T S++ A + +L+HG+ H +I GL + + ++L+
Sbjct: 393 FLVFKKMQACNMEPDIATMVSLIPA--CSHLAALQHGKCSHGSVIIRGLALETSICNSLI 450
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K G I S++VF++ + +W +I+ HG + F M+N+G PD +
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDV 510
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
TF+ ++ C +G++ +G+H FD+M Y I P +HY CMVD+L R G L+EA + +
Sbjct: 511 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQS 570
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+P + V +LLGACRIH N+++G++++ + K+ P G+G++VL+SN+++ G ++
Sbjct: 571 MPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEA 630
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLN 639
A +R K KG +K G+SW ++ LH F GD +HP S +IY + + ++K L
Sbjct: 631 AEVRIIQKVKGFKKSPGYSWIEIN--GSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLG 688
Query: 640 SKRERAIAL 648
+ + + L
Sbjct: 689 YQADTSFVL 697
>gi|218199277|gb|EEC81704.1| hypothetical protein OsI_25308 [Oryza sativa Indica Group]
Length = 749
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 288/506 (56%), Gaps = 10/506 (1%)
Query: 88 LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
L S ++ AL+ Y R RL EA+ +FD+MP + +V+WN ++ G+ + G+ A+ A
Sbjct: 90 LASNLFATTALLAFYCRSRRLPEAQHLFDQMPARTAVTWNTLIHGHARSAAPGL-AVAAF 148
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
M R G+ S +S AC ++ G +H V + G+ V VG L+ Y+KC
Sbjct: 149 ARMARAGVSPTASSVSSVLVACVRLEDAAAGATLHSVGLMHGFCASVVVGTALVDMYAKC 208
Query: 208 EVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLI 262
G A +VFR M ++NV ++T ++ S DA+ L +EM GV PN +T+ L+
Sbjct: 209 HHLGAAQQVFREMEEKNVATFTALVAGFVLSRRPHDAMLLVREMERSGVAPNLMTYSSLL 268
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
+ + + G+ +H +K + V + L+TMY++ ++D KV +SC++ +
Sbjct: 269 SSFASPEDIDHGKQVHCAVLKKGLEHDQFVLSALVTMYSKCGILEDFVKVQMSVSCQDQV 328
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
S+N++ISG + G A Q F + + + + +TF SVL A+G++ SL G++ H+
Sbjct: 329 SFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSS--SLLEGRQVHT 386
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
I+K+G DS V ++L+ MY + G+I ES VF + + +W +++S A+HG +
Sbjct: 387 LILKIGYDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKE 446
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML-KDYHIEPSPDHYSCM 500
V+ F++M V+PD ITFLSVLT C G++ KG F+ M K Y + +HY+CM
Sbjct: 447 VVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGYLVGARTEHYACM 506
Query: 501 VDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGS 560
VD+LGR G L EAE L+ +P PG SV ++LL AC+IHGN+E+ R++ L+++ P S
Sbjct: 507 VDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIVIRVSKRLIELNPHDS 566
Query: 561 GSYVLMSNLYAEKGDWEMVAILRKGM 586
+V +SN +A G W A +R+ M
Sbjct: 567 SVHVQLSNAFAGDGRWGNAAEIREAM 592
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 135/472 (28%), Positives = 237/472 (50%), Gaps = 37/472 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+ YC+S + +A +F+ + V+WNT++ G +S A++ RM GV A
Sbjct: 101 LAFYCRSRRLPEAQHLFDQMPARTAVTWNTLIHGHARSAAPGLAVAAFARMARAGVSPTA 160
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S+ L C+ E G LHS+ + G + V VG AL+ MY++ L A++VF E
Sbjct: 161 SSVSSVLVACVRLEDAAAGATLHSVGLMHGFCASVVVGTALVDMYAKCHHLGAAQQVFRE 220
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ ++ A+++G+ +A+L + EM R G+ + ++++S S+ ++++
Sbjct: 221 MEEKNVATFTALVAGFVLS-RRPHDAMLLVREMERSGVAPNLMTYSSLLSSFASPEDIDH 279
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+H +K G V + L++ YSKC + D KV + ++ +S+ ++IS
Sbjct: 280 GKQVHCAVLKKGLEHDQFVLSALVTMYSKCGILEDFVKVQMSVSCQDQVSFNSVISGLSC 339
Query: 234 MNR-EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ R ++A F EMR G + TF ++ AI + + EGR +H L +K + S V
Sbjct: 340 LGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQVHTLILKIGYDSVVDV 399
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ES 351
N LI+MYAR ++ +S VF + ++SWN+L+SG AQ+G V+ F + +
Sbjct: 400 QNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHV 459
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-------DSDPIVG------SAL 398
+P+ TF SVL A H ++ GL D +VG + +
Sbjct: 460 QPDHITFLSVLTACS-------------HVGLVDKGLEYFNLMKDKGYLVGARTEHYACM 506
Query: 399 LDMYGKRGSIFESQRVFNETQEKS-EFAWTAIISALARHGDYESVMNQFKEM 449
+D+ G+ G + E++ + N K + A++SA HG+ E V+ K +
Sbjct: 507 VDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIVIRVSKRL 558
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 199/658 (30%), Positives = 356/658 (54%), Gaps = 29/658 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++ Y K G +F+ + ++V W T++ + + D A S +M G+ +
Sbjct: 91 ISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTS 150
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT LS L LH LI+ G +S++ + N+++ MY + GR+ +ARR+F
Sbjct: 151 VTL---LSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFQS 207
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
+ +D VSWN++LS Y++ G E IL L++ M+ + ++ D +F SA SA + +L
Sbjct: 208 IDCRDIVSWNSLLSAYSKIG--ATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLR 265
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MN 235
LGK +HG+ +K G V + L+ Y +C A KVF+ +++V+ WT MIS +
Sbjct: 266 LGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLV 325
Query: 236 RED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ D A+ +F +M V P+ T + A + G IHG ++ + +
Sbjct: 326 QNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIP 385
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
N L+TMYA+ +Q S +F+++ ++++SWNA+++G+A+NG L+ FF +++S
Sbjct: 386 AQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGY-LSKGIFFFNEMRKS 444
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+P++ T S+L A G+A +L G+ H+ +++ L + +AL+DMY K G++
Sbjct: 445 FLRPDSITVTSLLQACGSAG--ALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLE 502
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+Q+ F+ ++ AW+ +I +G E + ++ E G+ P+ + F+SVL+ C
Sbjct: 503 NAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACS 562
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G+I KG +++SM KD+ + P+ +H +C+VD+L R G+++EA + P + VL
Sbjct: 563 HGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVL 622
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
LL ACR++G VE+G+ IA + +++P G++V ++N YA W+ V M+S
Sbjct: 623 GMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSL 682
Query: 590 GVRKEVGFSWADVGDIDGLHG----FSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
G++K G+S +V HG F + N+HP+ E+I + L ++ L K E
Sbjct: 683 GLKKYPGWSSIEV------HGTTFTFFASHNSHPKIEKIILTVKALSKNIRNLYVKNE 734
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 247/468 (52%), Gaps = 15/468 (3%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
DA T+ + C + F GL LH +V GL + Y+G++LI+ Y+++G + R+V
Sbjct: 47 LDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKV 106
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEK 173
FD M ++ V W I+ Y+++GD ++ ++ + MR+ G++ V+ S
Sbjct: 107 FDTMLKRNVVPWTTIIGSYSREGD--IDIAFSMFKQMRESGIQPTSVTLLSLLPGIS--- 161
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L L +H + I G+ + +++ N +++ Y KC DA ++F+ + R+++SW +++S
Sbjct: 162 KLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLS 221
Query: 234 M-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
E+ + L + M+++ + P+ TF + A +I ++ G+++HGL +K
Sbjct: 222 AYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNI 281
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ V + L+ +Y R + + KVF + ++++ W A+ISG QN + A+ F+ +I
Sbjct: 282 DQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMI 341
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ + KP+ T S L A A+ G H ++++ G+ D ++L+ MY K
Sbjct: 342 ESNVKPSTATLASGLAA--CAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNK 399
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +S +FN+ EK +W AI++ A++G + F EM +RPDSIT S+L
Sbjct: 400 LQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQA 459
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
CG G + +G+ + + +L+ I P + +VDM + G LE A++
Sbjct: 460 CGSAGALCQGKWIHNFVLRSSLI-PCIMTETALVDMYFKCGNLENAQK 506
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 198/395 (50%), Gaps = 13/395 (3%)
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
S+N+++S + G + + + I M + +LD +F S AC + G +H
Sbjct: 16 SFNSLVSRLSYQGAHH-QVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQS 74
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNRED----A 239
+ G +G+ L+S Y+K KVF M RNV+ WTT+I S +RE A
Sbjct: 75 VVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIA 134
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
S+FK+MR G+ P VT + L+ IS + +H L I F S+ ++ N ++ M
Sbjct: 135 FSMFKQMRESGIQPTSVTLLSLLPGIS---KLPLLLCLHCLIILHGFESDLALSNSMVNM 191
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTF 358
Y + + D+ ++F + CR+I+SWN+L+S Y++ G + +Q + I++ KP+ TF
Sbjct: 192 YGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
S L+A D+ L G+ H ++K GL+ D V SAL+ +Y + + + +VF T
Sbjct: 252 CSALSASAIKGDLRL--GKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKST 309
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
EK WTA+IS L ++ + + F +M V+P + T S L C + G G
Sbjct: 310 TEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGA 369
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ +L+ + P S +V M + +L+++
Sbjct: 370 SIHGYVLRQGIMLDIPAQNS-LVTMYAKCNKLQQS 403
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 125/272 (45%), Gaps = 11/272 (4%)
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
S+N+L+S + G +Q + + K ++ +AYTF S+ A S HG H
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFS--HGLSLHQ 73
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
++ GL D +GS+L+ Y K G I ++VF+ +++ WT II + +R GD +
Sbjct: 74 SVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDI 133
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+ FK+M G++P S+T LS+L G + + +L + E + MV
Sbjct: 134 AFSMFKQMRESGIQPTSVTLLSLLP--GISKLPLLLCLHCLIILHGF--ESDLALSNSMV 189
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG 561
+M G+ GR+ +A L I +S SLL A G E ++ A MK+E
Sbjct: 190 NMYGKCGRIADARRLFQSIDCRDIVS-WNSLLSAYSKIGATEEILQLLQA-MKIEDIKPD 247
Query: 562 SYVLMSNLYAE--KGDWEMVAILRKGMKSKGV 591
S L A KGD + ++ M G+
Sbjct: 248 KQTFCSALSASAIKGDLRLGKLVHGLMLKDGL 279
>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 317/572 (55%), Gaps = 22/572 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALS-FALRMNLIGVVFDA-- 57
+ + G FD A IF + + VS N ++ G + ++A+ F +L+ + D+
Sbjct: 196 FSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVFKETRHLVDINVDSYV 255
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVFD 116
+ S F L EG G ++H ++ GL D++V VGN LI MY++ G + AR VF
Sbjct: 256 ILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFG 315
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +KDSVSWN++++G Q+ + +A+ + M + GL + + SA S+C +
Sbjct: 316 LMVDKDSVSWNSMITGLDQNKCFE-DAVKSYNSMRKTGLMPSNFTLISALSSCASLGCIL 374
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
LG+Q HG IK+G VSV N L++ Y++ + KVF M +R+ +SW T+I
Sbjct: 375 LGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNTVIGALA 434
Query: 235 ----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A+ +F EM G PN VTFI L+ +S + K IH L +K N +
Sbjct: 435 DSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDN 494
Query: 291 SVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
++ N L+ Y + M++ E++F +S R+ +SWN++ISGY N L A+ + +++
Sbjct: 495 AIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQ 554
Query: 350 E-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ + +TF +VL+A A +L+ G H+ I+ L+SD ++GSAL+DMY K G I
Sbjct: 555 RGQRLDCFTFATVLSA--CATVATLERGMEVHACAIRACLESDVVIGSALVDMYSKCGRI 612
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ R FN ++ ++W ++IS ARHG ++ + F M+ G PD ITF+ VL+ C
Sbjct: 613 DYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSAC 672
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +G F SM + Y + P +HYSCMVD+LGR G L++ + + ++P P + +
Sbjct: 673 SHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIDNFINKMPIKPNILI 732
Query: 529 LQSLLGACRIHGN---VEMGERIADALMKMEP 557
+++LGAC GN E+G R A+ L M+P
Sbjct: 733 WRTVLGAC-CRGNGRKTELGRRAAEMLFNMDP 763
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 269/545 (49%), Gaps = 30/545 (5%)
Query: 1 MNMYCKS-GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSF-----ALRMNLIGVV 54
++MY K G D A +F+ + + + WN+++S + + DA S +++M G+
Sbjct: 85 ISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVYSQRGDAASCFELFSSMQMADSGLS 144
Query: 55 FDAVTYS-----TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
Y+ TA +D L G Q+ + I K GL + +YVG+AL +SR G
Sbjct: 145 LKPNEYTFGSLITAACSSVDSGLSLLG-QILARIKKSGLLANLYVGSALAGGFSRLGSFD 203
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
AR++F++M +++VS N ++ G + G EA+ E R + ++ S+ SAC
Sbjct: 204 YARKIFEQMTARNAVSMNGLMVGLVRQ-KCGEEAVEVFKE-TRHLVDINVDSYVILLSAC 261
Query: 170 GH----EKNLELGKQIHGVSIKMGYG-THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
++ G+++HG +I+ G V+VGN L++ Y+KC A VF M D++
Sbjct: 262 AEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKD 321
Query: 225 VISWTTMIS---MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
+SW +MI+ N+ EDAV + MR G+ P++ T I + + + + G+ HG
Sbjct: 322 SVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALSSCASLGCILLGQQTHG 381
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
IK + SV N L+ +YA + + +KVF + R+ +SWN +I A +G S++
Sbjct: 382 EGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNTVIGALADSGASVS 441
Query: 340 -AVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A++ F +++ PN TF ++L V + L H + H+ I+K + D + +A
Sbjct: 442 EAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSH--QIHALILKYNVKDDNAIENA 499
Query: 398 LLDMYGKRGSIFESQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
LL YGK G + + +F+ E + E +W ++IS + M+ M +G R
Sbjct: 500 LLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQRGQRL 559
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
D TF +VL+ C + +G + ++ +E S +VDM + GR++ A
Sbjct: 560 DCFTFATVLSACATVATLERGMEVHACAIRAC-LESDVVIGSALVDMYSKCGRIDYASRF 618
Query: 517 VGQIP 521
+P
Sbjct: 619 FNLMP 623
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 261/518 (50%), Gaps = 27/518 (5%)
Query: 26 VSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHE--GFLFGLQLH 80
V+W ++SG+ ++ DDA M G + + + +A+ C + G G+Q+H
Sbjct: 7 VTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQLGMQIH 66
Query: 81 SLIVKFGLDSEVYVGNALITMYSRW-GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
LI+K ++ + N LI+MY ++ G + AR VFDE+ ++S+ WN+I+S Y+Q GD
Sbjct: 67 GLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVYSQRGDA 126
Query: 140 G-VEAILALIEMMRKGLRLDHVSFTSAA---SACGH-EKNLELGKQIHGVSIKMGYGTHV 194
+ + ++M GL L +T + +AC + L L QI K G ++
Sbjct: 127 ASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKSGLLANL 186
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT-TMISMNR----EDAVSLFKEMRLD 249
VG+ L +S+ A K+F +M RN +S M+ + R E+AV +FKE R
Sbjct: 187 YVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVFKETR-H 245
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRM----IHGLCIKTNFL-SEPSVCNCLITMYARFE 304
V N +++ L+ A + L+ EGR +HG I+T ++ +V N LI MYA+
Sbjct: 246 LVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCG 305
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLN 363
+ + VF + ++ +SWN++I+G QN AV+++ + K P+ +T S L+
Sbjct: 306 DIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALS 365
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
+ + I L GQ+ H IK+GLD D V + LL +Y + G + E Q+VF+ E+ +
Sbjct: 366 SCASLGCILL--GQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQ 423
Query: 424 FAWTAIISALARHG-DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
+W +I ALA G + F EM G P+ +TF+++L K H
Sbjct: 424 VSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLS-TSKLSHQIH 482
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+++ Y+++ + ++ G+ G +E EE+ ++
Sbjct: 483 ALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRM 520
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 187/381 (49%), Gaps = 22/381 (5%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK--NL 175
MP+++ V+W ++SGYTQ+G +A L EM+ +G + +F SA AC L
Sbjct: 1 MPDRNGVTWACLISGYTQNG-MPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGL 59
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD-ANKVFRRMHDRNVISWTTMISM 234
+LG QIHG+ +K Y S+ NVL+S Y K D A VF + RN I W +++S+
Sbjct: 60 QLGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSV 119
Query: 235 --NREDAVS---LFKEMRLD----GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI--- 282
R DA S LF M++ + PN+ TF LI A + V G + G +
Sbjct: 120 YSQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAAC--SSVDSGLSLLGQILARI 177
Query: 283 -KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
K+ L+ V + L ++R S + K+F++++ R +S N L+ G + AV
Sbjct: 178 KKSGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAV 237
Query: 342 QAFFGVIKESKPNAYTFGSVLNAVG--AAEDISLKHGQRCHSHIIKVGL-DSDPIVGSAL 398
+ F N ++ +L+A A D + G+ H + I+ GL D+ VG+ L
Sbjct: 238 EVFKETRHLVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGL 297
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
++MY K G I ++ VF +K +W ++I+ L ++ +E + + M G+ P +
Sbjct: 298 INMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSN 357
Query: 459 ITFLSVLTVCGRNGMIHKGRH 479
T +S L+ C G I G+
Sbjct: 358 FTLISALSSCASLGCILLGQQ 378
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G+ D A FN + ++ SWN+++SG+ + D+AL RM L G + D
Sbjct: 603 VDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDH 662
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
+T+ LS C L EGF + S+ +GL V + ++ + R G L +
Sbjct: 663 ITFVGVLSACSHIGLVDEGFEY---FKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIDN 719
Query: 114 VFDEMPNKDSV-SWNAIL 130
++MP K ++ W +L
Sbjct: 720 FINKMPIKPNILIWRTVL 737
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 187/571 (32%), Positives = 309/571 (54%), Gaps = 17/571 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G+QLH+ ++K G S+ + N LI MY++ G+L A VFD MP ++ VSW A++ G+
Sbjct: 23 GVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLH 82
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
G+ E + EM G + + ++ ACG G QIHGV ++ G+ H
Sbjct: 83 HGE-ARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDV 139
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM-RLD 249
V N L+ YSK TGDA +VF + RN+ +W +MIS D++ +F+EM R
Sbjct: 140 VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRH 199
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHG-LCIK-TNFLSEPSVCNCLITMYARFESMQ 307
P++ TF L+ A S +EG +H + ++ + S + L+ +Y + +
Sbjct: 200 DEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLP 259
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGA 367
+ +VFD L R I W +I G+AQ G A+ F + G VL++V A
Sbjct: 260 VAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFR---RFWSSGVRADGHVLSSVVA 316
Query: 368 A-EDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
D +L + G++ H + K D V ++L+DMY K G E+ R F E ++ +
Sbjct: 317 VFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVS 376
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
WTA+I+ + +HG ++ F+EM+ +GV D + +L++L+ C +G++ + R F +
Sbjct: 377 WTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRIC 436
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+D + P +HY+CMVD+LGR G L EA+EL+ +P P + V Q+LL ACR+H +V +G
Sbjct: 437 QDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVG 496
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
+ D L+ ++ +YV++SN+ AE G+W +R M+ KG+RK+ G SW +V D
Sbjct: 497 REVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEV-DK 555
Query: 606 DGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ + GD+ HP++ +I R + + M+
Sbjct: 556 EVHFFYGGGDDAHPQAGDIRRALREVEARMR 586
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 168/327 (51%), Gaps = 21/327 (6%)
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
ASA G +L G Q+H +K+G+G+ + N L+ Y+KC A +VF M +RNV
Sbjct: 13 ASARG--SSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNV 70
Query: 226 ISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+SWT ++ + + LF EMR G PN+ T + A G + G IHG+
Sbjct: 71 VSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGVQIHGV 128
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
C++T F V N L+ MY++ D+ +VFD + R + +WN++ISGYA G +
Sbjct: 129 CVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDS 188
Query: 341 VQAFFGVIK--ESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLD--SDPI 393
+ F + + + +P+ +TF S+L A +GAA + G + H+ + G+ S+ I
Sbjct: 189 LLVFREMQRRHDEQPDEFTFASLLKACSGLGAA-----REGAQVHAAMAVRGVSPASNAI 243
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+ ALLD+Y K + + +VF+ + ++ WT +I A+ G + M F+ + G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHL 480
VR D SV+ V ++ +G+ +
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQV 330
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 212/454 (46%), Gaps = 23/454 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G+ A +F+ + ++VSW ++ GF ++ + L M G +
Sbjct: 46 IDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNE 105
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S L C G G+Q+H + V+ G + V N+L+ MYS+ +ARRVFD
Sbjct: 106 FTLSATLKAC--GGGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDV 163
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
+P+++ +WN+++SGY G G +++L EM R+ + D +F S AC
Sbjct: 164 IPSRNLATWNSMISGYAHAGQ-GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAR 222
Query: 177 LGKQIHGVSIKMGY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
G Q+H G ++ + L+ Y KC A +VF + RN I WTT+I
Sbjct: 223 EGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVG 282
Query: 235 NRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + +A+ LF+ GV + ++ + LV++G+ +H KT +
Sbjct: 283 HAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLD 342
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N L+ MY + ++ + F E+ R ++SW A+I+G ++G A+ F +
Sbjct: 343 VSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQA 402
Query: 350 ES-KPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
E + + + ++L+A G ++ + C ++ + + ++D+ G+
Sbjct: 403 EGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHY----ACMVDLLGRA 458
Query: 406 GSIFESQR-VFNETQEKSEFAWTAIISALARHGD 438
G + E++ + + E + W ++SA H D
Sbjct: 459 GELREAKELILSMPMEPTVGVWQTLLSACRVHKD 492
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 114/227 (50%), Gaps = 8/227 (3%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
L+ A + G+ ++ G +H +K F S+ + N LI MYA+ + + +VFD + R
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQR 378
++SW AL+ G+ +G + ++ FG ++ S PN +T + L A G + G +
Sbjct: 70 VVSWTALMVGFLHHGEARECLR-LFGEMRGSGTSPNEFTLSATLKACGGG----TRAGVQ 124
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H ++ G + +V ++L+ MY K +++RVF+ ++ W ++IS A G
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184
Query: 439 YESVMNQFKEMENK-GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+ F+EM+ + +PD TF S+L C G +G + +M
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAM 231
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 208/654 (31%), Positives = 321/654 (49%), Gaps = 42/654 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+NMY K G A +F+ + ++VS+ T++ + D A + R+ G +
Sbjct: 103 LNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQ 162
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T L + + +HS K G D +VG+ LI YS + +A VF+
Sbjct: 163 FVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNG 222
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD+V W A++S Y+++ + R S + A +C +
Sbjct: 223 IVRKDAVVWTAMVSCYSEN------------DCPENAFRCAQ-SCSLLAISCARQG---- 265
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
IHG +IK T VG L+ Y+KC DA F + +VI + MIS
Sbjct: 266 ---IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 322
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E A LF + V PN+ + ++ A + + G+ IH IK S+ V
Sbjct: 323 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFV 382
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ YA+ M S K+F L +SWN ++ G++Q+GL A+ F +
Sbjct: 383 GNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQM 442
Query: 353 P-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P T+ SVL A A S++H + H I K ++D ++G++L+D Y K G I ++
Sbjct: 443 PCTQVTYSSVLRA--CASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDA 500
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+VF E+ +W AIIS A HG + F M V + ITF+++L+VC
Sbjct: 501 LKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCST 560
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G+++ G LFDSM D+ I+PS +HY+C+V +LGR GRL +A + +G IP P V ++
Sbjct: 561 GLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRA 620
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL +C IH NV +G A+ ++++EP +YVL+SN+YA G + VA+LRK M++ GV
Sbjct: 621 LLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGV 680
Query: 592 RKEVGFSWADV-GDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRER 644
RK G SW ++ G+I H FS G HP I M E +LN K R
Sbjct: 681 RKVPGLSWVEIKGEI---HAFSVGSVDHPDMRVINAMLE-------WLNLKTSR 724
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 218/447 (48%), Gaps = 29/447 (6%)
Query: 39 DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG----LDSEVYV 94
D+ S A+ ++ GV D+ + L C+ G +H +V+ G LD ++
Sbjct: 43 DELTSLAILPSVPGV--DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLD--LFC 98
Query: 95 GNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-K 153
N L+ MY + G L ARR+FD MP ++ VS+ ++ + Q GD+ EA AL +R +
Sbjct: 99 ANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDF--EAAAALFRRLRWE 156
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G ++ T+ L +H + K+G+ + VG+ L+ YS C + DA
Sbjct: 157 GHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDA 216
Query: 214 NKVFRRMHDRNVISWTTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE 273
VF + ++ + WT M+S E+ CP + ++ + ++
Sbjct: 217 EHVFNGIVRKDAVVWTAMVSCYSEND------------CPENAFRCAQSCSLLAISCARQ 264
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
G IHG IKT +EP V L+ MYA+ ++D+ F+ + ++I + +IS YAQ
Sbjct: 265 G--IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ 322
Query: 334 NGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
+ + A + F +++ S PN Y+ SVL A + L G++ H+H IK+G +SD
Sbjct: 323 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQA--CTNMVQLDFGKQIHNHAIKIGHESDL 380
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
VG+AL+D Y K + S ++F+ ++ +E +W I+ ++ G E ++ F EM+
Sbjct: 381 FVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAA 440
Query: 453 GVRPDSITFLSVLTVCGRNGMI-HKGR 478
+ +T+ SVL C I H G+
Sbjct: 441 QMPCTQVTYSSVLRACASTASIRHAGQ 467
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 195/639 (30%), Positives = 339/639 (53%), Gaps = 29/639 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K + A +F+ + + +V WN +++ + + D A+ M L GV +
Sbjct: 142 LHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAER 201
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVY-------VGNALITMYSRWGRLVE 110
+T+ L C L L++ L VK ++ + AL+ Y G L +
Sbjct: 202 ITFIGVLDAC----SKLKDLEVAKL-VKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQ 256
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A R F + + A+++ YTQ + EA+ M+ +G++LD ++ + +AC
Sbjct: 257 AFRAFSRH-RLELILATAMITQYTQRERWD-EALELFKVMLLEGVKLDRIACMAVLNACS 314
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ LE G+ IHG ++ + HV+ GN L++ Y KC +A +VFR M R+VISW T
Sbjct: 315 GPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNT 374
Query: 231 MISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I+ + +A+ L M+LDGV + ++F+ + + + +GRMIH +++
Sbjct: 375 IIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESG 434
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA-QNGLSLAAVQAF 344
++ + N ++ MY +S D+ +VF + R+ +SWNA+I+ YA Q LS A+ F
Sbjct: 435 IKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLF 494
Query: 345 FGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + P+ +F V A SL G+ H I + GL+S+ V +A+L+MY
Sbjct: 495 QQMQLHGFMPDVISF--VAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYA 552
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G++ ++++F + +W +ISA A+HG + V+ F+ M ++G P+ +TF+S
Sbjct: 553 KSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVS 612
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYH-IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
V++ C G++ G LF S+L D+ I P +HY CMVD++ R G+L+ AE+ + P
Sbjct: 613 VVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPL 672
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
P + ++LGA ++H +VE + A+ LM++ P S +YV++SNLY E G + A +
Sbjct: 673 KPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKI 732
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRS 621
R+ M K +RKE FS V +H F +GD T+ R+
Sbjct: 733 RRLMYEKNIRKEPAFSSIAVK--RRVHEFFTGDTTNART 769
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 209/431 (48%), Gaps = 19/431 (4%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y+ L D G ++H+ I K +D ++G+ L+ MY G L++A+ FD MP
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN-LELG 178
+D+++W ++ + Q GD +A+ M +G+ + +F + AC + LE G
Sbjct: 61 VQDALTWARLIRAHGQIGD-SEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEG 119
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
++IHGV + V L+ Y KC DA KVF + + V+ W MI+
Sbjct: 120 RRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQ 179
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT---NFLSEP 290
+ E A+ +F M L+GV +TFIG++ A S ++ +++ LC++ + L +
Sbjct: 180 DHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLV-KLCVEEREHDHLHDS 238
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCR--EIISWNALISGYAQNGLSLAAVQAFFGVI 348
S L+ Y S D E+ F S E+I A+I+ Y Q A++ F ++
Sbjct: 239 SFATALVNFYG---SCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVML 295
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
E K + +VLNA L+ G+ H + ++ D G+AL++MYGK GS
Sbjct: 296 LEGVKLDRIACMAVLNACSGPR--GLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGS 353
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ E+ VF Q + +W II+A +H + ++ M+ GV+ D I+F++ L +
Sbjct: 354 LEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPL 413
Query: 468 CGRNGMIHKGR 478
C + + KGR
Sbjct: 414 CATSEALAKGR 424
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 8/166 (4%)
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
+ +L+ V A+ SL G+ H+ I K +D P +G L+ MY GS+ +++ F+
Sbjct: 1 YADLLDVV--ADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDR 58
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG-MIHK 476
+ W +I A + GD E ++ F+ M+ +GV P + F++VL C + ++ +
Sbjct: 59 MPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEE 118
Query: 477 GRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
GR + +L+ +E DHY + ++ M G+ +E+A ++ I
Sbjct: 119 GRRIH-GVLRGTAME--SDHYVSTTLLHMYGKCSSVEDARKVFDGI 161
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 199/658 (30%), Positives = 357/658 (54%), Gaps = 29/658 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++ Y K G +F+ + ++V W T++ + + D A S +M G+ +
Sbjct: 91 ISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTS 150
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT LS L LH LI+ G +S++ + N+++ MY + GR+ +ARR+F+
Sbjct: 151 VTL---LSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFES 207
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
+ +D VSWN++LS Y++ G E IL L++ M+ + ++ D +F SA SA + +L
Sbjct: 208 IGCRDIVSWNSLLSAYSKIG--ATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLR 265
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MN 235
LGK +HG+ +K G V + L+ Y +C A KVF+ +++V+ WT MIS +
Sbjct: 266 LGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLV 325
Query: 236 RED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ D A+ +F +M V P+ T + A + G IHG ++ + +
Sbjct: 326 QNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIP 385
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
N L+TMYA+ +Q S +F+++ ++++SWNA+++G+A+NG L+ FF +++S
Sbjct: 386 AQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGY-LSKGIFFFNEMRKS 444
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+P++ T S+L A G+A +L G+ H+ +++ L + +AL+DMY K G++
Sbjct: 445 FLRPDSITVTSLLQACGSAG--ALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLE 502
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+Q+ F+ ++ AW+ +I +G E + ++ E G+ P+ + F+SVL+ C
Sbjct: 503 NAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACS 562
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G+I KG +++SM KD+ + P+ +H +C+VD+L R G+++EA + P + VL
Sbjct: 563 HGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVL 622
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
LL ACR++G VE+G+ IA + +++P G++V ++N YA W+ V M+S
Sbjct: 623 GMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSL 682
Query: 590 GVRKEVGFSWADVGDIDGLHG----FSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
G++K G+S +V HG F + N+HP+ E+I + L ++ L K E
Sbjct: 683 GLKKYPGWSSIEV------HGTTFTFFASHNSHPKIEKIILTVKALSKNIRNLYVKNE 734
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 246/468 (52%), Gaps = 15/468 (3%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
DA T+ + C + F GL LH +V GL + Y+G++LI+ Y+++G + R+V
Sbjct: 47 LDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKV 106
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEK 173
FD M ++ V W I+ Y+++GD ++ ++ + MR+ G++ V+ S
Sbjct: 107 FDTMLKRNVVPWTTIIGSYSREGD--IDIAFSMFKQMRESGIQPTSVTLLSLLPGIS--- 161
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L L +H + I G+ + +++ N +++ Y KC DA ++F + R+++SW +++S
Sbjct: 162 KLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLS 221
Query: 234 M-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
E+ + L + M+++ + P+ TF + A +I ++ G+++HGL +K
Sbjct: 222 AYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNI 281
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ V + L+ +Y R + + KVF + ++++ W A+ISG QN + A+ F+ +I
Sbjct: 282 DQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMI 341
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ + KP+ T S L A A+ G H ++++ G+ D ++L+ MY K
Sbjct: 342 ESNVKPSTATLASGLAA--CAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNK 399
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +S +FN+ EK +W AI++ A++G + F EM +RPDSIT S+L
Sbjct: 400 LQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQA 459
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
CG G + +G+ + + +L+ I P + +VDM + G LE A++
Sbjct: 460 CGSAGALCQGKWIHNFVLRSSLI-PCIMTETALVDMYFKCGNLENAQK 506
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 199/395 (50%), Gaps = 13/395 (3%)
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
S+N+++S + G + + + I M + +LD +F S AC + G +H
Sbjct: 16 SFNSLVSRLSYQGAHH-QVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQS 74
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNRED----A 239
+ G +G+ L+S Y+K KVF M RNV+ WTT+I S +RE A
Sbjct: 75 VVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIA 134
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
S+FK+MR G+ P VT + L+ IS + +H L I F S+ ++ N ++ M
Sbjct: 135 FSMFKQMRESGIQPTSVTLLSLLPGIS---KLPLLLCLHCLIILHGFESDLALSNSMVNM 191
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTF 358
Y + + D+ ++F+ + CR+I+SWN+L+S Y++ G + +Q + I++ KP+ TF
Sbjct: 192 YGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
S L+A D+ L G+ H ++K GL+ D V SAL+ +Y + + + +VF T
Sbjct: 252 CSALSASAIKGDLRL--GKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKST 309
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
EK WTA+IS L ++ + + F +M V+P + T S L C + G G
Sbjct: 310 TEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGA 369
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ +L+ + P S +V M + +L+++
Sbjct: 370 SIHGYVLRQGIMLDIPAQNS-LVTMYAKCNKLQQS 403
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 125/272 (45%), Gaps = 11/272 (4%)
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
S+N+L+S + G +Q + + K ++ +AYTF S+ A S HG H
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFS--HGLSLHQ 73
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
++ GL D +GS+L+ Y K G I ++VF+ +++ WT II + +R GD +
Sbjct: 74 SVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDI 133
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+ FK+M G++P S+T LS+L G + + +L + E + MV
Sbjct: 134 AFSMFKQMRESGIQPTSVTLLSLLP--GISKLPLLLCLHCLIILHGF--ESDLALSNSMV 189
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSG 561
+M G+ GR+ +A L I G + SLL A G E ++ A MK+E
Sbjct: 190 NMYGKCGRIADARRLFESI-GCRDIVSWNSLLSAYSKIGATEEILQLLQA-MKIEDIKPD 247
Query: 562 SYVLMSNLYAE--KGDWEMVAILRKGMKSKGV 591
S L A KGD + ++ M G+
Sbjct: 248 KQTFCSALSASAIKGDLRLGKLVHGLMLKDGL 279
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/601 (31%), Positives = 317/601 (52%), Gaps = 34/601 (5%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDS-EVYVGNALITMYSRWGRLVEARRV 114
D T+ L C G HS ++ G+ + +VY GN+L+ Y+R G + +A RV
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERV 166
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH--VSFTSAASACGHE 172
FD MP +D V+WN+++ GY +G G A++ EM + L + H V +A +AC E
Sbjct: 167 FDGMPARDVVTWNSMVDGYVSNG-LGTLALVCFREM-HEALEVQHDGVGIIAALAACCLE 224
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
L G+++H I+ G V VG ++ Y KC A VF M R V++W MI
Sbjct: 225 SALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMI 284
Query: 233 ---SMNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
++N E+A F +M+ +G VT I L+ A + GR +HG + FL
Sbjct: 285 GGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFL 344
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ L+ MY++ ++ SEKVF +++ + ++SWN +I+ Y + + A+ F +
Sbjct: 345 PHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDL 404
Query: 348 IKES-KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + P+ +T +V+ A +G L+ ++ HS+II++G + ++ +A++ MY
Sbjct: 405 LNQPLYPDYFTMSAVVPAFVLLGL-----LRQCRQMHSYIIRLGYGENTLIMNAIMHMYA 459
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
+ G + S+ +F++ K +W +I A HG S + F EM+ G+RP+ TF+S
Sbjct: 460 RCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVS 519
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VLT C +G+ +G F+SM +DY + P +HY CM D+LGR G L+E + + +P
Sbjct: 520 VLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPID 579
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEP-----AGSGSYVLMSNLYAEKGDWEM 578
P V SLL A R ++++ E A+ + ++E +G YVL+S++YA+ G W+
Sbjct: 580 PTFRVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKD 639
Query: 579 VAILRKGMKSKGVRKEVGFSWADVGDIDGLHG----FSSGDNTHPRSEEIYRMAECLGSE 634
V ++ M+ KG+R+ D I LHG F +GD THP+S+ I ++ L +
Sbjct: 640 VERIKSLMEEKGLRR------TDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLSGK 693
Query: 635 M 635
+
Sbjct: 694 I 694
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 147/282 (52%), Gaps = 9/282 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MYCK G A +F + + +V+WN ++ G+ E+ ++A ++M G +
Sbjct: 253 LDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEV 312
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT L+ C E L+G +H I + V + AL+ MYS+ G++ + +VF +
Sbjct: 313 VTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQ 372
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K VSWN +++ Y Y +EAI ++++ + L D+ + ++ A L
Sbjct: 373 MTTKTLVSWNNMIAAYMYKEMY-MEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQ 431
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM-----I 232
+Q+H I++GYG + + N +M Y++C + ++F +M ++VISW TM I
Sbjct: 432 CRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAI 491
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
A+ +F EM+ +G+ PN+ TF+ ++ A S+ L EG
Sbjct: 492 HGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEG 533
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
M+MY + G + IF+ + D++SWNT++ G+ + AL M G+ +
Sbjct: 455 MHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNE 514
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
T+ + L+ C L EG+ Q +S+ +G+ ++ + + R G L E +
Sbjct: 515 STFVSVLTACSVSGLTDEGW---TQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQ 571
Query: 114 VFDEMPNKDSVS-WNAILSGYTQDGD-----YGVEAILAL 147
+ MP + W ++L+ D Y E I L
Sbjct: 572 FIENMPIDPTFRVWGSLLTASRNRNDIDIAEYAAERIFQL 611
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 183/612 (29%), Positives = 326/612 (53%), Gaps = 17/612 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIG-VVFD 56
++ Y + G+ +AL + + + + +WN + G S +AL M G V D
Sbjct: 82 VHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAAD 141
Query: 57 AVTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
TY + C + +G + + + +V+ + V+V AL+ M+++ G L EAR
Sbjct: 142 GFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEAR 201
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
VF+ M +D +W A++ G GD+ ++A+ M +G D V + ACG
Sbjct: 202 SVFESMLERDLAAWTAMIGGAVHAGDW-LDAMSLFSRMRSEGFLADSVIIATVIPACGRA 260
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
K L G +HG +++ G G V N L+ Y KC G A++VF + ++V+SW+T+I
Sbjct: 261 KELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLI 320
Query: 233 ---SMNREDAVS--LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S N +D VS LF EM G+ PN T ++ ++S L + G+ IHG ++ F
Sbjct: 321 AGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFD 380
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + I Y+R S++++E V + + R+++ WN++++GYA NG + +A+ AF +
Sbjct: 381 QSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRAL 440
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
K +P+ T SVL L G+ H+++++ + S V +AL+DMY K
Sbjct: 441 QKVGFRPDHVTVVSVLPVCN--HHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCKCC 498
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ + + +F ++ + +IS+ +HG + + F M+ G+ PD +TF+++L+
Sbjct: 499 CLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLS 558
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G+I KG H +D ML+DY+I P +HYSC+VD+ R G+L++A + V + +
Sbjct: 559 SCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEI 618
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
VL LLGACR+H +++ E +A + + P+ G ++L+SN+YA G W V +R +
Sbjct: 619 DVLGCLLGACRVHNRMDIAELVAKRIFEQNPSDPGYHILLSNIYANAGMWSHVTRIRTMI 678
Query: 587 KSKGVRKEVGFS 598
+++ ++ + G S
Sbjct: 679 ENRSLKNKTGNS 690
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 217/430 (50%), Gaps = 15/430 (3%)
Query: 98 LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LR 156
L+ Y+R G A V D MP ++S +WNA + G G + EA+ M+R G +
Sbjct: 81 LVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSGQFA-EALETYWAMVRDGSVA 139
Query: 157 LDHVSFTSAASACGHEKNLELGK----QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD 212
D ++ AC +E G+ + ++ V V L+ ++KC G+
Sbjct: 140 ADGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGE 199
Query: 213 ANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISI 267
A VF M +R++ +WT MI + + DA+SLF MR +G + V +I A
Sbjct: 200 ARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPACGR 259
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
++ G ++HG ++ + V N L+ MY + + +++VF + ++++SW+ L
Sbjct: 260 AKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTL 319
Query: 328 ISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
I+GY+QNG +V F ++ KPN+ T S+L ++ +E +HG+ H ++
Sbjct: 320 IAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSL--SEMKLFRHGKEIHGFSLRN 377
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
G D +GSA +D Y ++GSI E++ V ++ W ++++ A +G+ +S + F
Sbjct: 378 GFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAF 437
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
+ ++ G RPD +T +SVL VC + + +G+ L +++ Y + + ++DM +
Sbjct: 438 RALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHY-MSSVCSVSNALIDMYCK 496
Query: 507 VGRLEEAEEL 516
LE+ +E+
Sbjct: 497 CCCLEKGKEI 506
>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
Length = 703
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 194/588 (32%), Positives = 329/588 (55%), Gaps = 32/588 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY + + D A +F+ + + +VSWN +++ + ++ AL RM L +
Sbjct: 129 VSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRMELEP---NE 185
Query: 58 VTYSTALSFC---LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
VT+++ + C DH G ++H I L++ V V A++TMY ++G++ AR+V
Sbjct: 186 VTFASVFNACSLLPDHREV--GKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQV 243
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F+ + +K+ VSWNA+L YTQ+ + EA+ EM+ + ++ D V+ A +
Sbjct: 244 FNGIQHKNVVSWNAMLGAYTQN-NLDREALEVYHEMVAQKVQRDEVTVVIALGISASLRL 302
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L+LG ++H +S+ GY +++ V N L+S Y KC A +VF ++ +V+SWT +I
Sbjct: 303 LKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVA 362
Query: 233 ----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG-LCIKTNFL 287
NRE A+ L+K+M +G+ P+ VTF ++ A S + ++ G+ +H L + +
Sbjct: 363 YTQHGRNRE-ALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGF 421
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCRE---IISWNALISGYAQNGLSLAAVQAF 344
S+ + LI MY + + S ++F SC++ ++ WNA+I+ Y Q G S AAV
Sbjct: 422 SDGVLVAALINMYVKCGRLDLSSEIFQ--SCKDTKAVVVWNAMITAYEQEGYSRAAVD-L 478
Query: 345 FGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDM 401
+ ++K+ P+ T S+L+A +D L+ G++ H II +P+V +AL+ M
Sbjct: 479 YDMMKQRGLDPDESTLSSILSACAELQD--LEKGEQLHVEIIASRDCSQNPVVLNALISM 536
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y G I E++ VF + + +WT +ISA + GD + ++ M +GV+P TF
Sbjct: 537 YASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPTF 596
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
L V CG G++ + + F SM++D I P+ DHYSC+V +L R G+LEEAE+L+ +P
Sbjct: 597 LCVFLACGHAGLVDECKWYFQSMIED-RITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMP 655
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNL 569
PG SLLGACR HG+++ R AD M+++ S YVL+SN+
Sbjct: 656 FNPGSVGWTSLLGACRTHGDLKRARRAADEAMELDRQDSAPYVLLSNV 703
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 155/528 (29%), Positives = 269/528 (50%), Gaps = 22/528 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY K G D A+ +F++L + SWN +++ F K+ A+ M+ G+ D+
Sbjct: 28 LQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDS 87
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ L C G ++HS + GL S + V NAL++MY+R RL AR VFD+
Sbjct: 88 ATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIVQNALVSMYARCSRLDVARVVFDK 147
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG-HEKNLE 176
+ +K VSWNA+++ + G EA AL R L + V+F S +AC + E
Sbjct: 148 IESKSVVSWNAMIAACARQG----EAEQALQLFKRMELEPNEVTFASVFNACSLLPDHRE 203
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
+GK+IH +V+V +++ Y K G A +VF + +NV+SW M+
Sbjct: 204 VGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAMLGAYT 263
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+++RE A+ ++ EM V ++VT + + + L+K G +H L + + S
Sbjct: 264 QNNLDRE-ALEVYHEMVAQKVQRDEVTVVIALGISASLRLLKLGIELHELSVAHGYDSNI 322
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N LI+MY + + + +VF ++ +++SW ALI Y Q+G + A++ + + E
Sbjct: 323 KVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGE 382
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII--KVGLDSDPIVGSALLDMYGKRGS 407
+P+ TF SVL+A D+ L GQ H+ ++ K G SD ++ +AL++MY K G
Sbjct: 383 GMEPDKVTFTSVLSACSNTSDLEL--GQALHARLLARKDGF-SDGVLVAALINMYVKCGR 439
Query: 408 IFESQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ S +F ++ K+ W A+I+A + G + ++ + M+ +G+ PD T S+L+
Sbjct: 440 LDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILS 499
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
C + KG L ++ +P + ++ M G + EA+
Sbjct: 500 ACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAK 547
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 151/560 (26%), Positives = 274/560 (48%), Gaps = 50/560 (8%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G ++H+ IV GL S+ ++G+ L+ MY + G + +A +VF +P + SWN I++ + +
Sbjct: 5 GRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFAK 64
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+ +G +AI M G++ D + +S AC ++LE GK+IH ++ G + +
Sbjct: 65 N-RHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSII 123
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDG 250
V N L+S Y++C A VF ++ ++V+SW MI+ E A+ LFK M L+
Sbjct: 124 VQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRMELE- 182
Query: 251 VCPNDVTFIGLIHAISIGNLVKE-GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
PN+VTF + +A S+ +E G+ IH ++ + +V ++TMY +F + +
Sbjct: 183 --PNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMA 240
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAE 369
+VF+ + + ++SWNA++ Y QN L A++ + ++ + +V+ A+G +
Sbjct: 241 RQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEV--TVVIALGISA 298
Query: 370 DIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+ LK G H + G DS+ V +AL+ MYGK + ++RVF++ + +WTA
Sbjct: 299 SLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTA 358
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+I A +HG + +K+ME +G+ PD +TF SVL+ C + G+ L +L
Sbjct: 359 LIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARK 418
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEE--------------------------------- 515
+ +++M + GRL+ + E
Sbjct: 419 DGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDL 478
Query: 516 --LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVL--MSNLYA 571
++ Q P S L S+L AC ++E GE++ ++ VL + ++YA
Sbjct: 479 YDMMKQRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYA 538
Query: 572 EKGDWEMVAILRKGMKSKGV 591
G+ + K MK++ V
Sbjct: 539 SCGEIREAKAVFKRMKNRDV 558
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 205/444 (46%), Gaps = 43/444 (9%)
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L G++IH + G + +G+ L+ Y KC DA +VF + R++ SW +I+
Sbjct: 2 LPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAA 61
Query: 235 ---NR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
NR A+ +F+ M G+ P+ T ++ A S ++EG+ IH + S
Sbjct: 62 FAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSS 121
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V N L++MYAR + + VFD++ + ++SWNA+I+ A+ G + A+Q F +
Sbjct: 122 IIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM-- 179
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
E +PN TF SV NA D + G+R H I L+++ V +A++ MYGK G +
Sbjct: 180 ELEPNEVTFASVFNACSLLPD-HREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVG 238
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++VFN Q K+ +W A++ A ++ + + EM + V+ D +T + L +
Sbjct: 239 MARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISA 298
Query: 470 RNGMIHKG--------RHLFDSMLKDYHIEPSPDHYSCMVDMLGRV-------------- 507
++ G H +DS +K + S +D RV
Sbjct: 299 SLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTA 358
Query: 508 --------GRLEEAEELVGQIPG---GPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
GR EA EL Q+ G P S+L AC ++E+G+ + L+ +
Sbjct: 359 LIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARK 418
Query: 557 PAGSGSYVLMS--NLYAEKGDWEM 578
S ++ + N+Y + G ++
Sbjct: 419 DGFSDGVLVAALINMYVKCGRLDL 442
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
+L G+R H+HI+ GL SD +G LL MYGK GS+ ++ +VF+ +S F+W II+
Sbjct: 1 ALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIA 60
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A A++ + F+ M++ G++PDS T SVL C + +G+ + L +
Sbjct: 61 AFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALA-RGLS 119
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
S + +V M R RL+ A + +I +S +++ AC G E ++
Sbjct: 120 SSIIVQNALVSMYARCSRLDVARVVFDKIESKSVVS-WNAMIAACARQGEAEQALQLFKR 178
Query: 552 LMKMEP 557
M++EP
Sbjct: 179 -MELEP 183
>gi|413917687|gb|AFW57619.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 611
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 197/553 (35%), Positives = 301/553 (54%), Gaps = 34/553 (6%)
Query: 75 FGLQLHSLIVKFG-----------LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
G LH+++ K L V V N+L+ MY R G +A RVFDEM +DS
Sbjct: 29 LGTSLHAIVAKNPSHFRLCPRRSCLQHVVVVWNSLVAMYGRCGCRGDAVRVFDEMALRDS 88
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGL----RLDHVSFTSAASAC----GHEKNL 175
VSWN++LS D LAL+ M DH + T+ SAC G +
Sbjct: 89 VSWNSLLSASASATD-----ALALLRRMLSAAPGAAACDHATLTTVLSACARAGGGTGSA 143
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-M 234
L +HG++ G VSVGN L++ Y +C G A +VF M DRNVI+WT M+S M
Sbjct: 144 SL-PAVHGLAASCGLDAEVSVGNALITAYFECSSPGSAERVFDGMADRNVITWTAMVSGM 202
Query: 235 NR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
R +++SLF++MR V N ++ + A + +EG+ IHGL +K ++
Sbjct: 203 ARAERYSESLSLFRQMR-RAVDANRASYSSSLLACAGSRAAREGQQIHGLAVKAGLETDL 261
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-K 349
V + L+ MY++ M+D+ +VF + +S +++G+AQNGL A + F ++ K
Sbjct: 262 HVESELMDMYSKCGLMEDALRVFRSGQDPDEVSLTVILAGFAQNGLEEEAFRLFAEMVGK 321
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+ +A +VL A GA+ +L G++ H+ IK + V + L++MY K G +
Sbjct: 322 GIRVDANMVSAVLGAFGASAPFAL--GKQIHALAIKRCFGGNTYVCNGLINMYSKCGELQ 379
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
ES RVF+ T K+ W +II+A ARHG V F+ ME GV+P +TFLS+L C
Sbjct: 380 ESIRVFDGTPSKNTVTWNSIIAAYARHGHGWEVFGLFESMEADGVKPTDVTFLSLLHGCS 439
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G KG + DSM Y I P +HY+C+VDMLGR +L++A+ + P +
Sbjct: 440 HVGSPRKGLEILDSMPSKYGIHPKVEHYACVVDMLGRASQLDDAKAFIEDGPFKDSALLW 499
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
QSL+GAC H N +GE A+ L+ ++P + +YVL+SN+Y+ +G W+ A + K M+++
Sbjct: 500 QSLMGACSFHKNSGVGECAAEKLLLLDPDCTAAYVLLSNVYSSEGRWDDRARIMKRMRAR 559
Query: 590 GVRKEVGFSWADV 602
G+RK+ G SW ++
Sbjct: 560 GLRKDTGKSWIEL 572
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 140/449 (31%), Positives = 217/449 (48%), Gaps = 20/449 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDAVT 59
MY + G A+ +F+ + D VSWN++LS + DAL+ RM D T
Sbjct: 66 MYGRCGCRGDAVRVFDEMALRDSVSWNSLLSASASATDALALLRRMLSAAPGAAACDHAT 125
Query: 60 YSTALSFCLDHEGFLFGLQL---HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T LS C G L H L GLD+EV VGNALIT Y A RVFD
Sbjct: 126 LTTVLSACARAGGGTGSASLPAVHGLAASCGLDAEVSVGNALITAYFECSSPGSAERVFD 185
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +++ ++W A++SG + Y L+L MR+ + + S++S+ AC +
Sbjct: 186 GMADRNVITWTAMVSGMARAERYSES--LSLFRQMRRAVDANRASYSSSLLACAGSRAAR 243
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---S 233
G+QIHG+++K G T + V + LM YSKC + DA +VFR D + +S T ++ +
Sbjct: 244 EGQQIHGLAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRSGQDPDEVSLTVILAGFA 303
Query: 234 MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N E+A LF EM G+ + ++ A G+ IH L IK F
Sbjct: 304 QNGLEEEAFRLFAEMVGKGIRVDANMVSAVLGAFGASAPFALGKQIHALAIKRCFGGNTY 363
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VCN LI MY++ +Q+S +VFD + ++WN++I+ YA++G F + +
Sbjct: 364 VCNGLINMYSKCGELQESIRVFDGTPSKNTVTWNSIIAAYARHGHGWEVFGLFESMEADG 423
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHG-QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP TF S+L+ G + S + G + S K G+ + ++DM G R S
Sbjct: 424 VKPTDVTFLSLLH--GCSHVGSPRKGLEILDSMPSKYGIHPKVEHYACVVDMLG-RASQL 480
Query: 410 ESQRVFNETQ--EKSEFAWTAIISALARH 436
+ + F E + S W +++ A + H
Sbjct: 481 DDAKAFIEDGPFKDSALLWQSLMGACSFH 509
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 178/388 (45%), Gaps = 30/388 (7%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH-------------VSVGNVLMST 203
L + + + CG +L LG +H + K +H V V N L++
Sbjct: 9 LSYAHLSGLLARCGRAGDLRLGTSLHAIVAK--NPSHFRLCPRRSCLQHVVVVWNSLVAM 66
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE--DAVSLFKEM--RLDGVCPND-VTF 258
Y +C GDA +VF M R+ +SW +++S + DA++L + M G D T
Sbjct: 67 YGRCGCRGDAVRVFDEMALRDSVSWNSLLSASASATDALALLRRMLSAAPGAAACDHATL 126
Query: 259 IGLIHAISI---GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
++ A + G +HGL +E SV N LIT Y S +E+VFD
Sbjct: 127 TTVLSACARAGGGTGSASLPAVHGLAASCGLDAEVSVGNALITAYFECSSPGSAERVFDG 186
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKH 375
++ R +I+W A++SG A+ ++ F + + N ++ S L A + + +
Sbjct: 187 MADRNVITWTAMVSGMARAERYSESLSLFRQMRRAVDANRASYSSSLLACAGSR--AARE 244
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
GQ+ H +K GL++D V S L+DMY K G + ++ RVF Q+ E + T I++ A+
Sbjct: 245 GQQIHGLAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRSGQDPDEVSLTVILAGFAQ 304
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
+G E F EM KG+R D+ +VL G + G+ + +K +
Sbjct: 305 NGLEEEAFRLFAEMVGKGIRVDANMVSAVLGAFGASAPFALGKQIHALAIKRCF---GGN 361
Query: 496 HYSC--MVDMLGRVGRLEEAEELVGQIP 521
Y C +++M + G L+E+ + P
Sbjct: 362 TYVCNGLINMYSKCGELQESIRVFDGTP 389
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M+MY K G + AL +F + +PD VS +L+GF ++ ++A M G+ DA
Sbjct: 268 MDMYSKCGLMEDALRVFRSGQDPDEVSLTVILAGFAQNGLEEEAFRLFAEMVGKGIRVDA 327
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S L F G Q+H+L +K YV N LI MYS+ G L E+ RVFD
Sbjct: 328 NMVSAVLGAFGASAPFALGKQIHALAIKRCFGGNTYVCNGLINMYSKCGELQESIRVFDG 387
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
P+K++V+WN+I++ Y + G +G E + L E M G++ V+F S C H +
Sbjct: 388 TPSKNTVTWNSIIAAYARHG-HGWE-VFGLFESMEADGVKPTDVTFLSLLHGCSHVGSPR 445
Query: 177 LGKQIHGVSIKMGYGTHVSV 196
G +I S+ YG H V
Sbjct: 446 KGLEILD-SMPSKYGIHPKV 464
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 192/623 (30%), Positives = 322/623 (51%), Gaps = 57/623 (9%)
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S+ LS C D + G QLH I+ G + + L+T YS + LV+A + +
Sbjct: 104 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNI 163
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
WN ++S Y ++G + +A+ A +M++KG+R D+ ++ S ACG E +L GK+
Sbjct: 164 LHPFPWNLLISSYVRNG-FCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKE 222
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM------ 234
+H + V N L+S Y KC G A +F ++ +R+ +SW +MIS+
Sbjct: 223 VHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGM 282
Query: 235 ----------------------------------NREDAVSLFKEMRLDGVCPNDVTFI- 259
N + A+ L +MR G + V I
Sbjct: 283 WNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALII 342
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
GL IG+ K G+ IH I++ F +V N LITMY+R + ++ + +F + +
Sbjct: 343 GLGACSHIGD-AKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAK 401
Query: 320 EIISWNALISG-----YAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLK 374
+I+WN++ISG ++ L FG+ +PN T SVL A +L+
Sbjct: 402 SLITWNSIISGCCHMDRSEEASFLLREMLLFGI----EPNYVTIASVLPL--CARVANLQ 455
Query: 375 HGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
HG+ H ++ + ++ +AL+DMY + G + E++RVF+ E+ + +T++I+
Sbjct: 456 HGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGY 515
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
G+ ++ + F+EM N ++PD IT ++VL+ C +G++ +G+ LF+ M Y + P
Sbjct: 516 GMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPH 575
Query: 494 PDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALM 553
+H++CM D+ GR G L +A+E++ +P P ++ +L+GACRIH N E+GE A+ L+
Sbjct: 576 LEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLL 635
Query: 554 KMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSS 613
+M+P G YVL++N+YA G W +A +R M+ GVRK G +W DVG G F
Sbjct: 636 EMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVG--TGFSPFLV 693
Query: 614 GDNTHPRSEEIYRMAECLGSEMK 636
D ++ ++EIY + E L MK
Sbjct: 694 DDTSNANADEIYPLLEGLTMVMK 716
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 229/476 (48%), Gaps = 52/476 (10%)
Query: 13 ALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLD 69
A I N N WN ++S + ++ ALS +M G+ D TY + L C +
Sbjct: 154 AHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGE 213
Query: 70 HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAI 129
FG ++H I + + V NALI+MY + G++ AR +FD++P +D+VSWN++
Sbjct: 214 ELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSM 273
Query: 130 LS-----------------------------------GYTQDGDYGVEAILALIEMMRK- 153
+S GY + G+Y + L L+ MRK
Sbjct: 274 ISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNY--KGALELLSQMRKC 331
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G LD V+ AC H + +LGK+IH +I+ +G +V N L++ YS+C+ A
Sbjct: 332 GSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHA 391
Query: 214 NKVFRRMHDRNVISWTTMIS----MNR-EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
+F+ M +++I+W ++IS M+R E+A L +EM L G+ PN VT ++ +
Sbjct: 392 YLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARV 451
Query: 269 NLVKEGRMIHG-LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
++ G+ H + + +F + N L+ MYAR + ++ +VFD L R+ +++ ++
Sbjct: 452 ANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSM 511
Query: 328 ISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
I+GY G AA++ F + + KP+ T +VL+A + ++ GQ + +
Sbjct: 512 IAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVT--QGQLLFEKMRSL 569
Query: 387 -GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
GL + + D++G+ G + +++ + K A W +I A H + E
Sbjct: 570 YGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTE 625
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 146/321 (45%), Gaps = 45/321 (14%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS--------------------------- 33
++MY K G+ A +F+ + D VSWN+++S
Sbjct: 243 ISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNI 302
Query: 34 --------GFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSL 82
G+ ++ + AL +M G D+V L C G ++HS
Sbjct: 303 IIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSF 362
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVE 142
++ V NALITMYSR L A +F M K ++WN+I+SG D E
Sbjct: 363 AIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCH-MDRSEE 421
Query: 143 AILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG-VSIKMGYGTHVSVGNVLM 201
A L EM+ G+ ++V+ S C NL+ GK+ H ++ + + H+ + N L+
Sbjct: 422 ASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALV 481
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRED--AVSLFKEMRLDGVCPNDV 256
Y++ +A +VF + +R+ +++T+MI+ M E A+ LF+EM + P+ +
Sbjct: 482 DMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHI 541
Query: 257 TFIGLIHAISIGNLVKEGRMI 277
T I ++ A S LV +G+++
Sbjct: 542 TMIAVLSACSHSGLVTQGQLL 562
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 191/613 (31%), Positives = 325/613 (53%), Gaps = 24/613 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+++Y G A +F+ + PD W +L + ++++ +L+ G +D
Sbjct: 95 VSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDD 154
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKF-GLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ +S AL C + + G ++H IVK D+ V G L+ MY++ G + + +VF+
Sbjct: 155 IVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNVVLTG--LLDMYAKCGEIKSSYKVFE 212
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL-DHVSFTSAASACGHEKNL 175
++ ++ V W ++++GY ++ Y E L L MR+ L + ++ + AC + L
Sbjct: 213 DITLRNVVCWTSMIAGYVKNDLY--EEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRAL 270
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
GK HG IK G + L+ Y KC +A +VF +++ WT MI
Sbjct: 271 HQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGY 330
Query: 233 ----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
S+N +A+SLF++M G+ PN VT ++ + ++ GR IHGL IK +
Sbjct: 331 THNGSVN--EALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVG-IW 387
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ +V N L+ MYA+ +D++ VF+ S ++I++WN++ISG++QNG A+ F +
Sbjct: 388 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 447
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL--DSDPIVGSALLDMYGKR 405
ES PN T S+ +A + +++ G H++ +K+G S VG+ALLD Y K
Sbjct: 448 TESVMPNGVTVASLFSACASLGSLAI--GSSLHAYSVKLGFLASSSVHVGTALLDFYAKC 505
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G ++ +F+ +EK+ W+A+I + GD + + F+EM K +P+ TF SVL
Sbjct: 506 GDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVL 565
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C GM+++G+ F SM KDY+ PS HY+CMVDML R G LE+A +++ ++P P
Sbjct: 566 SACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPD 625
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ + L C +H ++GE + ++ + P + YVL+SNLYA G W +R
Sbjct: 626 VRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVRNL 685
Query: 586 MKSKGVRKEVGFS 598
MK +G+ K G S
Sbjct: 686 MKQRGLSKIAGHS 698
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 152/547 (27%), Positives = 248/547 (45%), Gaps = 56/547 (10%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q H ++ GL ++ + L+++Y +G +AR VFD++P D W IL Y +
Sbjct: 74 QAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNN 133
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ E I +M+ G D + F+ A AC ++L+ GK+IH +K+ +V +
Sbjct: 134 E-SFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNVVLT 192
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVC 252
L+ Y+KC + KVF + RNV+ WT+MI+ E+ + LF MR + V
Sbjct: 193 G-LLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVL 251
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
N+ T+ L+ A + + +G+ HG IK+ + L+ MY + + ++ +V
Sbjct: 252 GNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRV 311
Query: 313 FDELSCREIISWNALISGYAQNGL---SLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAE 369
F+E S +++ W A+I GY NG +L+ Q GV KPN T SVL+ G
Sbjct: 312 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGV--GIKPNCVTIASVLSGCGLVG 369
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
++ L G+ H IKVG+ D V +AL+ MY K +++ VF EK AW +I
Sbjct: 370 NLEL--GRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSI 426
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG----------------- 472
IS +++G + F M + V P+ +T S+ + C G
Sbjct: 427 ISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGF 486
Query: 473 ----MIHKGRHLFDSMLK-----------DYHIEPSPDHYSCMVDMLGRV----GRLEEA 513
+H G L D K D E + +S M+ G+ G LE
Sbjct: 487 LASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELF 546
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK---MEPAGSGSYVLMSNLY 570
EE++ + P S S+L AC G V G++ ++ K P+ + Y M ++
Sbjct: 547 EEMLKK-QQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPS-TKHYTCMVDML 604
Query: 571 AEKGDWE 577
A G+ E
Sbjct: 605 ARAGELE 611
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 130/309 (42%), Gaps = 39/309 (12%)
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
R HG+ + + S+ L+++Y F +D+ VFD++ + W ++ Y N
Sbjct: 73 RQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLN 132
Query: 335 GLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
S ++ + ++K + F L A +D L +G++ H I+KV D +
Sbjct: 133 NESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQD--LDNGKKIHCQIVKVP-SFDNV 189
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
V + LLDMY K G I S +VF + ++ WT++I+ ++ YE + F M
Sbjct: 190 VLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENS 249
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
V + T+ +++ C + +H+G+ ++K IE S + ++DM + G + A
Sbjct: 250 VLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKS-GIELSSCLVTSLLDMYVKCGDISNA 308
Query: 514 EE----------------LVGQIPGG------------------PGLSVLQSLLGACRIH 539
+VG G P + S+L C +
Sbjct: 309 RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLV 368
Query: 540 GNVEMGERI 548
GN+E+G I
Sbjct: 369 GNLELGRSI 377
>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 989
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/608 (31%), Positives = 329/608 (54%), Gaps = 17/608 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K G+ D A +F++ + + WN+++SG+ +++ AL +M + V DA
Sbjct: 384 VSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDA 443
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + C + +H+ V+ + V NAL+ MY G L + ++F +
Sbjct: 444 TTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQK 503
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
M + +SWN I+SGY + D +EA + L MR+ GL+ D V+ S+ ++
Sbjct: 504 MEVRMLISWNTIISGYAEIRD--LEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTT 561
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
+G+ +H +++K G +S+ N L++ YS C ++F + RN +S+ +++ R
Sbjct: 562 VGESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYR 621
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E+ + LF++M + PN +T + L+ + ++G+ +H I+ E S
Sbjct: 622 KNNLSEEILPLFRQMVKNEQEPNHITVLNLL---PVCQNHQQGKSVHCYAIRNFSTLETS 678
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
I MY+RF ++ S K+F+ + R II WNA++S Q L+ A F +
Sbjct: 679 FFTSAICMYSRFNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAFDFFRQMHFLN 738
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+ T S+++A + L G+ + I++ G +V +AL+DM+ + GS+
Sbjct: 739 MKPDEVTMMSLVSACAQLGNSDL--GECVTALILQKGFGGTLLVVNALIDMHSRCGSLSF 796
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F+ + K W+A+I++ + HGD ES + F M + GV+PD ITF+ +L+ C
Sbjct: 797 ARELFDSSVVKDSVTWSAMINSYSMHGDCESALAIFSMMIDSGVKPDDITFVIILSACSH 856
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G + + R LF S+ D+ I P +HY+CMVD+LGR G L+EA ++V + P S+L+
Sbjct: 857 SGFVEQARALFKSLQIDHGITPRMEHYACMVDLLGRSGHLDEAYDVVRSMSFRPSESLLE 916
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLLGACR HGN ++GE + + L+ + SYV++SN+YA G W LR M++KG
Sbjct: 917 SLLGACRFHGNSKIGEAVGNLLIDSQHGNPRSYVMLSNIYASVGKWNDYEWLRVDMEAKG 976
Query: 591 VRKEVGFS 598
+RK+ G S
Sbjct: 977 LRKDAGVS 984
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 147/525 (28%), Positives = 276/525 (52%), Gaps = 16/525 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+++Y + +F+ + D+VS+N+++S + K ++ +M+ G+ +
Sbjct: 283 ISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGLGPNL 342
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT + L C D G G +H +++KFGL ++ V +AL++MYS+ G L A+ +FD
Sbjct: 343 VTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLFDS 402
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
K+++ WN+I+SGY + ++ + A+ +M + + D + C H K+L +
Sbjct: 403 CTEKNNLLWNSIISGYLVNNEWNM-ALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRM 461
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
K IH +++ + + SV N L++ Y C + K+F++M R +ISW T+IS
Sbjct: 462 AKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISGYAE 521
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E +V LF +MR +G+ + VT IGLI +IS+ G +H L +K+ + S+
Sbjct: 522 IRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCNMDISL 581
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ES 351
N LITMY+ S++ +++FD LS R +S+N L++GY +N LS + F ++K E
Sbjct: 582 TNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQ 641
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+PN T VLN + ++ + G+ H + I+ + ++ + MY + ++ S
Sbjct: 642 EPNHIT---VLNLLPVCQN--HQQGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVDYS 696
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
++FN E++ W AI+SA + ++ + F++M ++PD +T +S+++ C +
Sbjct: 697 CKLFNSVGERNIIVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSACAQL 756
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
G G + +L+ + + ++DM R G L A EL
Sbjct: 757 GNSDLGECVTALILQK-GFGGTLLVVNALIDMHSRCGSLSFAREL 800
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/546 (26%), Positives = 270/546 (49%), Gaps = 19/546 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K+G + +F+ + D++SWN ++SG+ + +A+ M G+ +A
Sbjct: 182 LDMYAKAGWIGASRTVFDFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANA 241
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T C G LH+ +K G+ + + ALI++Y+ L +R +FD
Sbjct: 242 STLVCIAGACGAAGDSDAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDL 301
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
KD VS+N+++S Y Q G + E+ +M GL + V+ S C + L
Sbjct: 302 QHVKDLVSYNSMISAYMQHGKWK-ESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNL 360
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
G +HG+ IK G +SV + L+S YSK A +F ++N + W ++IS +
Sbjct: 361 GDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLV 420
Query: 235 NRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N E A+ F +M+++ V P+ T I +I+ ++ + IH ++ F SV
Sbjct: 421 NNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSV 480
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ MY + S K+F ++ R +ISWN +ISGYA+ A+V+ FF + +E
Sbjct: 481 MNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGL 540
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ + T +++++ AED ++ G+ HS +K G + D + + L+ MY GS+
Sbjct: 541 QFDVVTLIGLISSISVAEDTTV--GESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEAC 598
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
QR+F+ ++ ++ +++ ++ E ++ F++M P+ IT L++L VC +
Sbjct: 599 QRLFDNLSSRNTVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQNH 658
Query: 472 GMIHKGRHLFDSMLKDYH-IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G+ + ++++ +E S ++ + M R ++ + +L + G + V
Sbjct: 659 ---QQGKSVHCYAIRNFSTLETS--FFTSAICMYSRFNNVDYSCKLFNSV-GERNIIVWN 712
Query: 531 SLLGAC 536
++L AC
Sbjct: 713 AILSAC 718
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 213/417 (51%), Gaps = 9/417 (2%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T+ + C G ++H +++ G + V V AL+ MY++ G + +R VF
Sbjct: 139 DNFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVF 198
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D M KD +SWNA++SGY+ +G EA+ A EM + G+R + + A ACG +
Sbjct: 199 DFMGQKDLISWNAMISGYSLNGSLR-EAVEATQEMQQDGMRANASTLVCIAGACGAAGDS 257
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
+ G +H ++K G S+ L+S Y+ + + +F H ++++S+ +MIS
Sbjct: 258 DAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAY 317
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ ++ +F++M G+ PN VT I ++ S V G +HG+ IK +
Sbjct: 318 MQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQI 377
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
SV + L++MY++ + ++ +FD + + + WN++ISGY N A+ F + I+
Sbjct: 378 SVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIE 437
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+A T V+ +D L+ + H++ ++ + + V +ALL MYG G +
Sbjct: 438 NVAPDATTVIKVIYGCRHIKD--LRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELS 495
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
S ++F + + + +W IIS A D E+ + F +M +G++ D +T + +++
Sbjct: 496 SSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLIS 552
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 133/264 (50%), Gaps = 4/264 (1%)
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
++ TF +I A + + + GR +H ++T V L+ MYA+ + S VF
Sbjct: 139 DNFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVF 198
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
D + +++ISWNA+ISGY+ NG AV+A + ++ + NA T + A GAA D
Sbjct: 199 DFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGACGAAGDS- 257
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
G H+ +K G+ D + AL+ +Y + S+ +F+ K ++ ++ISA
Sbjct: 258 -DAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISA 316
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
+HG ++ + F++M G+ P+ +T +SVL C ++ G + ++K + +
Sbjct: 317 YMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIK-FGLAE 375
Query: 493 SPDHYSCMVDMLGRVGRLEEAEEL 516
S +V M ++G L+ A+ L
Sbjct: 376 QISVVSALVSMYSKLGELDSAKHL 399
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 156/384 (40%), Gaps = 45/384 (11%)
Query: 232 ISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGL-CIKTNFLSE 289
+S +++ F + P+ F +HA S+ L K +H L + +
Sbjct: 18 LSKSKQALAKSFASLTPPRALPHPDAFPEFLHATRSLKCLSK----LHALLAVAGAIARD 73
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCRE--IISWNALISGYAQNGLSLAAVQAFFGV 347
SV ++ Y F + VF R + S N + ++ +G + + +
Sbjct: 74 TSVVTAVVDRYLSFGRPASAASVFAGAYRRRPTVYSLNLAVRCFSDHGFHRELLDLYRTL 133
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
N +TF V+ A A + L G+ H +++ G + + V +ALLDMY K G
Sbjct: 134 CTFGSDN-FTFPPVIKACAAVSCLPL--GREMHCRVLRTGHEGNVGVQTALLDMYAKAGW 190
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I S+ VF+ +K +W A+IS + +G + +EM+ G+R ++ T + +
Sbjct: 191 IGASRTVFDFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGA 250
Query: 468 CGRNGMIHKGRHLFDSMLK-----DYHIEPS-------------------PDH------Y 497
CG G G L LK D + P+ H Y
Sbjct: 251 CGAAGDSDAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSY 310
Query: 498 SCMVDMLGRVGRLEEAEELVGQIPG---GPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
+ M+ + G+ +E+ ++ Q+ GP L + S+L C V +G+ + ++K
Sbjct: 311 NSMISAYMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIK 370
Query: 555 MEPAGSGSYV-LMSNLYAEKGDWE 577
A S V + ++Y++ G+ +
Sbjct: 371 FGLAEQISVVSALVSMYSKLGELD 394
>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 205/647 (31%), Positives = 345/647 (53%), Gaps = 47/647 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G ++A +F+ + +IV+WN+++ F + + +A+ M + GV
Sbjct: 223 LDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQ 282
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT S+ LS + G Q H+L V GL+ +G++LI YS+ G + +A VF E
Sbjct: 283 VTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSE 342
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M KD+V+WN ++SGY +G V+ L L +M+ + LR D V+ S +A +NL+
Sbjct: 343 MLEKDTVTWNLLVSGYVHNGL--VDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLK 400
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
LGK+ H ++ + V+V + ++ Y+KCE A +VF R++I W T+++
Sbjct: 401 LGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYA 460
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E + + LF +M+L+G+ PN +++ +++ +G L+ +G++ K F+ S
Sbjct: 461 EQGHSGETLKLFYQMQLEGLPPNVISW----NSVILG-LLNKGKVDQA---KDTFMEMQS 512
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ C +I+W LI G AQNGL A F + +
Sbjct: 513 LG-----------------------ICPNLITWTTLICGLAQNGLGDEAFLTFQSMEEAG 549
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN+ + S+L+A SL HG+ H +I + L V +L++MY K GSI +
Sbjct: 550 IKPNSLSISSLLSACSTMA--SLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQ 607
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++RVF+ +K + A+IS A HG ++ F+ ++ + ++PD ITF S+L+ CG
Sbjct: 608 AKRVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACGH 667
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G LF M+ ++ I +HY C+V +L R L+EA ++ +P P +
Sbjct: 668 AGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILGMPFEPDAFIFG 727
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLL ACR H + E+ ER+ + L+K+EP SG+YV +SN YA G W+ + +R MK +
Sbjct: 728 SLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVRGLMKERS 787
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKY 637
+ K G S +G + H F +GD +H R++EIY M L EM++
Sbjct: 788 LSKIPGHSLIQIG--NKTHVFFAGDKSHSRTKEIYMMLALLRVEMQF 832
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 243/483 (50%), Gaps = 14/483 (2%)
Query: 40 DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNA 97
+AL + L + Y L C+ G Q+H I+K G + Y+
Sbjct: 61 EALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETK 120
Query: 98 LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL 157
L+ YS+ A R+F ++ ++ SW AI+ ++ G + EA++ EM GL L
Sbjct: 121 LVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMG-FNQEALMGFREMHEYGLLL 179
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
D+ A A G + + GK +H +KMG G + V L+ Y KC + +A KVF
Sbjct: 180 DNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVF 239
Query: 218 RRMHDRNVISWTTMI------SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
++ ++N+++W +MI +N E AV F EMR++GV P VT + A + +++
Sbjct: 240 DKILEKNIVAWNSMIVNFTQNGLNAE-AVETFYEMRVEGVAPTQVTLSSFLSASANLSVI 298
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
EG+ H L + + + + LI Y++ ++D+E VF E+ ++ ++WN L+SGY
Sbjct: 299 DEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGY 358
Query: 332 AQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
NGL A+ + E+ + ++ T S++ A AA+ +LK G+ HS ++ L+S
Sbjct: 359 VHNGLVDRALDLCHVMQSENLRFDSVTLASIMAA--AADSRNLKLGKEGHSFCVRNNLES 416
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D V S+++DMY K + ++RVF+ T ++ W +++A A G + F +M+
Sbjct: 417 DVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQ 476
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+G+ P+ I++ SV+ G + + + F M + I P+ ++ ++ L + G
Sbjct: 477 LEGLPPNVISWNSVILGLLNKGKVDQAKDTFMEM-QSLGICPNLITWTTLICGLAQNGLG 535
Query: 511 EEA 513
+EA
Sbjct: 536 DEA 538
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 179/358 (50%), Gaps = 15/358 (4%)
Query: 169 CGHEKNLELGKQIHGVSIKMG--YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
C +E+ L LG+QIHG +K G + + L+ YSKC+ + AN++F ++ +N
Sbjct: 88 CVYERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEF 147
Query: 227 SWTTMISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
SW ++ + ++A+ F+EM G+ ++ A + G+ +H
Sbjct: 148 SWAAIMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYV 207
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
+K V L+ MY + ++++KVFD++ + I++WN++I + QNGL+ AV
Sbjct: 208 VKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAV 267
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
+ F+ + ++ P T S L+A +A + G++ H+ + GL+ I+GS+L++
Sbjct: 268 ETFYEMRVEGVAPTQVTLSSFLSA--SANLSVIDEGKQGHALAVLSGLELTNILGSSLIN 325
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
Y K G + +++ VF+E EK W ++S +G + ++ M+++ +R DS+T
Sbjct: 326 FYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVT 385
Query: 461 FLSVLTVCG--RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
S++ RN + K H S ++E S ++DM + +LE A +
Sbjct: 386 LASIMAAAADSRNLKLGKEGH---SFCVRNNLESDVAVASSIIDMYAKCEKLECARRV 440
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 209/663 (31%), Positives = 335/663 (50%), Gaps = 56/663 (8%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTY 60
YC + +A +F+ + + VSW ++SG+ D A ++M D +
Sbjct: 305 YCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIF 364
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
LS + L + +K G + +V VG+A++ Y+R G L A F+ MP
Sbjct: 365 VVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPE 424
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
++ SW +++ + Q G ++ + L E + + + +A + G + L
Sbjct: 425 RNEYSWTTMIAAFAQCGR--LDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARL--- 479
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRE 237
+V N +++ Y++ + +A +F++M +N SW MI+ N E
Sbjct: 480 ----IFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEE 535
Query: 238 --DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
+A+ L E+ G P+D +F + A + V+ GR+IH L IKT V N
Sbjct: 536 SREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNG 595
Query: 296 LITMYAR----------FESMQ---------------------DSEKVFDELSCREIISW 324
LI+MYA+ F +++ D+ VF+++ R+++SW
Sbjct: 596 LISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSW 655
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
A+IS Y Q G A+ F ++ KPN T S+L+A G I L G++ H+ I
Sbjct: 656 TAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKL--GEQFHALI 713
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQR-VFNETQEKSEFAWTAIISALARHGDYESV 442
K+G D+ VG++L+ MY K G +E VF E E W A++ A++G +
Sbjct: 714 FKLGFDTFLFVGNSLITMYFKCG--YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEA 771
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
+ F++ME +G+ PD ++FL VL C G++ +G F+SM + Y I P HY+CMVD
Sbjct: 772 IKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVD 831
Query: 503 MLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGS 562
+LGR G L EAE L+ +P P + ++LLGACRIH NVE+G+R+A+ L +M S +
Sbjct: 832 LLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSAT 891
Query: 563 YVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSE 622
YVL+SNL+A +G W+ VA +RK MK +G+ KE G SW V + LH F +GD TH + E
Sbjct: 892 YVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVK--NKLHCFVTGDRTHDQIE 949
Query: 623 EIY 625
EIY
Sbjct: 950 EIY 952
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 245/525 (46%), Gaps = 57/525 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
+N Y ++G+ D+A +F+ +I +W +L+G+ K R+ VF+++T
Sbjct: 209 INGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEG-------RIEEAREVFESMTE 261
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVG--NALITMYSRWGRLVEARRVFDEM 118
+S+ G++ L + F E V N+++T Y R+ EAR +FD+M
Sbjct: 262 RNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQM 321
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P ++SVSW ++SGY DY EA ++M R R D F SA +LEL
Sbjct: 322 PERNSVSWMVMISGYVHISDYW-EAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELI 380
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+ ++IK GY V VG+ +++ Y++ A F M +RN SWTTMI+
Sbjct: 381 GSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQC 440
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+DA+ L++ + V T ++ A + +++ R+I + N ++
Sbjct: 441 GRLDDAIQLYERVPEQTV----ATKTAMMTAYAQVGRIQKARLIFDEILNPNVVA----W 492
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SK 352
N +I Y + +++++ +F ++ + SW A+I+G+ QN S A++ + + S
Sbjct: 493 NAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSV 552
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS----- 407
P+ +F S L+A D+ + G+ HS IK G + V + L+ MY K G+
Sbjct: 553 PSDSSFTSALSACANIGDVEI--GRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGS 610
Query: 408 -IFESQR-------------------------VFNETQEKSEFAWTAIISALARHGDYES 441
+F + R VF + ++ +WTAIISA + G E
Sbjct: 611 HVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEV 670
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
++ F +M +G++P+ +T S+L+ CG G I G + K
Sbjct: 671 ALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFK 715
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 128/526 (24%), Positives = 222/526 (42%), Gaps = 123/526 (23%)
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
+ ++ N I R GR+ EARRVF+EM +D VSWN++++GY+Q+G
Sbjct: 168 QTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNG----------- 216
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
++D A G ++ +L++ Y+K
Sbjct: 217 -------KVDEARLLFDAFV----------------------GKNIRTWTILLTGYAKEG 247
Query: 209 VTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
+A +VF M +RNV+SW MIS G N G
Sbjct: 248 RIEEAREVFESMTERNVVSWNAMIS----------------GYVQN-------------G 278
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+L K R + + N S N ++T Y M ++ ++FD++ R +SW +I
Sbjct: 279 DL-KNARKLFDEMPEKNVAS----WNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMI 333
Query: 329 SGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
SGY A F + + ++P+ F VL+A+ +D+ L R + IK G
Sbjct: 334 SGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIA--IKTG 391
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+ D +VGSA+L+ Y + GS+ + F E++E++WT +I+A A+ G + + ++
Sbjct: 392 YEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYE 451
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
+ + V T +++T + G I K R +FD +L P+ ++ ++ +
Sbjct: 452 RVPEQTV----ATKTAMMTAYAQVGRIQKARLIFDEILN-----PNVVAWNAIIAGYTQN 502
Query: 508 GRLEEAEELVGQIP----------------------------------GGPGLSVLQSLL 533
G L+EA++L ++P P S S L
Sbjct: 503 GMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSAL 562
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVL--MSNLYAEKGDWE 577
AC G+VE+G R+ +L SYV+ + ++YA+ G+ E
Sbjct: 563 SACANIGDVEIG-RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVE 607
>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
Length = 785
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 177/582 (30%), Positives = 325/582 (55%), Gaps = 15/582 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+ MY + G+ + A IF+++ DI++WN +++ + + L L+ G D
Sbjct: 203 ITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDK 262
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ L+ E +HS IV+ G+ + +G AL+ MYS+ L + R +F++
Sbjct: 263 VTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEK 322
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ +SWN +++ Y + G G +A+ M G++ D+V+ + C +L+L
Sbjct: 323 MPQRNVISWNVMVTAYAKHG-LGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKL 381
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+++HG + + + N L++ Y +C A VF + RNVISWT M++
Sbjct: 382 GRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSR 441
Query: 234 MNRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
NR+D A+ LF + L GV P +TF+ + A + +GR++H +++ + S+
Sbjct: 442 QNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSL 501
Query: 293 CNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISGYAQNGLSLAAVQAF-FGVIKE 350
+ L+ MY R S++D++ FD+ R+ ++W+A+I+ + Q+G +Q F +
Sbjct: 502 GSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQG 561
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP-IVGSALLDMYGKRGSIF 409
+ TF S L+A D L+ G+R HS++ + D++ V ++L+ MYGK GS+
Sbjct: 562 LDMSPATFASTLSACSNLAD--LREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLD 619
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ VF ++ + W AIIS A+H + F M+ +GV PD +TF+ +L+VC
Sbjct: 620 CAREVFETSRRQDTICWNAIISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCS 679
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G + + SM+ + +EP+ D+Y+C++D+LGR G+L+EAEE + + P + L
Sbjct: 680 HGGLLDEGVYAYASMV-ELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETL 738
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
SLL +C+ HG+V+ G R A+ +M+M+P S ++V++S++Y+
Sbjct: 739 TSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAHVVLSSIYS 780
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 272/525 (51%), Gaps = 12/525 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFAL--RMNLIGVVFDAV 58
+ MY G D A +F+ + ++++W ++ + +F + M L G + V
Sbjct: 103 LTMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVTSLEQAFKVFRLMELEGFKSNFV 162
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
TY T + C E G+ LH V+ E + NALITMY R GRL +AR +F M
Sbjct: 163 TYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSM 222
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+D ++WNA+++ Y Q G + EA+L M+++G + D V+F + + + L
Sbjct: 223 VERDIIAWNALITEYGQHG-HVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEV 281
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
K +H ++ G ++++G L++ YSKCE D +F +M RNVISW M++ +
Sbjct: 282 KLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKH 341
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
AV + + M+LDGV P++VT +GL++ + +K GR +HG + ++ +
Sbjct: 342 GLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILW 401
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESK 352
N L+ MY R ++ +E VFD + R +ISW A+++ Y++ A+ F + + K
Sbjct: 402 NSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVK 461
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P TF L+A AE +L G+ HS ++ G D D +GSAL+ MYG+ GSI +++
Sbjct: 462 PTCITFLEALDACVGAE--ALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAK 519
Query: 413 RVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
F++T+ K+ W+A+I+A +HG + + M+ +G+ TF S L+ C
Sbjct: 520 ACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNL 579
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ +G+ + + + + + +V M G+ G L+ A E+
Sbjct: 580 ADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREV 624
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 249/483 (51%), Gaps = 17/483 (3%)
Query: 39 DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNAL 98
DDA RM+ V T++ + C H + L ++ G+ + A
Sbjct: 47 DDAWETFERMSYKNVY----TWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAA 102
Query: 99 ITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLD 158
+TMY G + +A+RVFD MP ++ ++W A++ + + L+E+ +G + +
Sbjct: 103 LTMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVTSLEQAFKVFRLMEL--EGFKSN 160
Query: 159 HVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR 218
V++ + AC + LE+G +H S++ + N L++ Y +C DA +F
Sbjct: 161 FVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFS 220
Query: 219 RMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE 273
M +R++I+W +I+ + E+AV L++ M +G P+ VTF+ L+ + + E
Sbjct: 221 SMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTE 280
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
+++H +++ ++ L+ MY++ ES++D+ +F+++ R +ISWN +++ YA+
Sbjct: 281 VKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAK 340
Query: 334 NGLSLAAVQ-AFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
+GL AVQ + + KP+ T +LN + D LK G++ H I + ++D
Sbjct: 341 HGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSAD--LKLGRKVHGWIAEGRCEADL 398
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
I+ ++LL+MYG+ G + +++ VF+ +++ +WTA+++A +R + + F +
Sbjct: 399 ILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLS 458
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH-IEPSPDHYSCMVDMLGRVGRLE 511
GV+P ITFL L C + KGR + ++ + I+ S S +V M GR G +
Sbjct: 459 GVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSLG--SALVAMYGRCGSIR 516
Query: 512 EAE 514
+A+
Sbjct: 517 DAK 519
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 232/456 (50%), Gaps = 44/456 (9%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
L C + +LHS IV+ LD+ V++GN LI Y + L +A F+ M K+
Sbjct: 2 LQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNV 61
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
+W AI+ Q + + AI+ L +M+ +G++ D+++ +A
Sbjct: 62 YTWTAIIGVCAQHHCHSL-AIILLRQMLLEGVKPDNITLLAA------------------ 102
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR----EDA 239
++ Y C DA +VF M RNVI+WT MI + E A
Sbjct: 103 -----------------LTMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVTSLEQA 145
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+F+ M L+G N VT++ L+ A S ++ G ++H ++++ E +CN LITM
Sbjct: 146 FKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITM 205
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTF 358
Y R ++D+ +F + R+II+WNALI+ Y Q+G AV + +++E KP+ TF
Sbjct: 206 YGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTF 265
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
++L E +L + HSHI++ G+ + +G+AL+ MY K S+ +++ +F +
Sbjct: 266 VALLTMSNGPE--ALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKM 323
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+++ +W +++A A+HG + + M+ GV+PD++T + +L VC + + GR
Sbjct: 324 PQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGR 383
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
+ + + E ++ +++M GR G +E+AE
Sbjct: 384 KVH-GWIAEGRCEADLILWNSLLNMYGRCGEVEQAE 418
>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 307/553 (55%), Gaps = 9/553 (1%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
F +S L C D G+ +H+ +VK ++ + + N L+++Y ++G + A ++
Sbjct: 57 FKFHQFSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQL 116
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD MP +D VS+N ++S ++ ++ + +M ++ ++ +H++F AC
Sbjct: 117 FDTMPRRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIA 176
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L L H +++ G ++ VG+ L+ Y+K DA K F + + +++SW MI
Sbjct: 177 LRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDG 236
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ ++E AV +F +M V + T +I S +K G HG IK E
Sbjct: 237 CARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHE 296
Query: 290 PSVCNCLITMYARFES-MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ N LITMY++ E + K+F +S IISW A+ISG+ QN + A+ F ++
Sbjct: 297 TPIYNALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEML 356
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ + N ++F S+L G + L+ G++ H+ IIK D V +AL+DMY K GS
Sbjct: 357 RLGVRENDFSFSSILPVYGNLAN--LEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGS 414
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ VF + + + T +I + +HG + + EM+++G+ PD +TFL L
Sbjct: 415 LEDAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYA 474
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ +G +F M++D++++P +H++C+VDMLGR GRL EAE + ++ +
Sbjct: 475 CSHGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVL 534
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V ++LLGACR+HG + +GE+ A +M+++P G YVL++N+YAE+G WE ++R+ +
Sbjct: 535 VWETLLGACRVHGEMVLGEKSAQKIMELQPGRHGPYVLLANIYAERGSWEDKVMVREKLV 594
Query: 588 SKGVRKEVGFSWA 600
S G++K+VG SW
Sbjct: 595 SHGLKKQVGCSWV 607
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 232/457 (50%), Gaps = 28/457 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD----DALSFALRMNLIGVVFD 56
+++Y K G A +F+ + D+VS+NT++S +++ D + +M V +
Sbjct: 101 LSLYLKFGHIHHAHQLFDTMPRRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPN 160
Query: 57 AVTYSTALSFCLDHEGFLFGLQL----HSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
+T++ + C +G L L+L H+ V+ GL S +VG++L+ Y++ +L +A
Sbjct: 161 HITFAGLIGAC---DG-LIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAI 216
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+ F+E+ D VSWN ++ G ++ + A+ +M++ +R+D + TS C
Sbjct: 217 KAFNEIMELDLVSWNIMIDGCARN-NSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKP 275
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV-TGDANKVFRRMHDRNVISWTTM 231
+L+ G Q HG +IK+G + N L++ YSKCE K+F + + N+ISWT M
Sbjct: 276 GDLKHGMQFHGSAIKLGLAHETPIYNALITMYSKCEKGVASPVKIFGSISEPNIISWTAM 335
Query: 232 IS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKT 284
IS E+A+ LFKEM GV ND +F ++ GNL +++G+ IH IK+
Sbjct: 336 ISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPV--YGNLANLEQGKQIHARIIKS 393
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
F + SV N LI MY++ S++D+ VF ++ +++S +I Y Q+G A++
Sbjct: 394 WFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEIL 453
Query: 345 FGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMY 402
+ E P+ TF L A + + G R +I+ L + ++DM
Sbjct: 454 AEMKSEGLVPDGVTFLGCLYACSHGGLV--EEGVRVFKIMIEDHNLKPKREHFACVVDML 511
Query: 403 GKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGD 438
G+ G + E++ +E +S+ W ++ A HG+
Sbjct: 512 GRAGRLNEAENFIDEMGIESDVLVWETLLGACRVHGE 548
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 194/624 (31%), Positives = 329/624 (52%), Gaps = 47/624 (7%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D + + C DH QLH+ IV L + ++ + LIT YS+ L EA +V
Sbjct: 32 LDYGAFGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKV 91
Query: 115 FDEMPNKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACG-H 171
FD++ +K+ SWNA+L GY+ + + + +L+ L+ D+ + T A
Sbjct: 92 FDKILDKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVL 151
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+ L K++ ++ G+ + + V N L++ YS+C+ G A +F RMHDR+++SW +M
Sbjct: 152 FPDSILAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSM 211
Query: 232 ISMNR-----EDAVSLFKEMRLD--GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
I+ ED L+++M LD G+ PN VT + ++ A + N + G +H I+
Sbjct: 212 IAGYSQGGFYEDCKELYRKM-LDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIER 270
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
+ S N LI +YA+ S+ + ++F+E+S ++ +++ +++SGY +G A+ F
Sbjct: 271 KVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLF 330
Query: 345 ---------------FGVIKES-----------------KPNAYTFGSVLNAVGAAEDIS 372
G+++ + +PNA T S+L +
Sbjct: 331 REMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSN-- 388
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
LK G+ H++ I+ G + V ++++D Y K G + +Q VF++++++S WTAIISA
Sbjct: 389 LKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISA 448
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
+ HGD + + F +M + G +PD +TF +VL C +GM+++ +FD M Y +P
Sbjct: 449 YSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQP 508
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
+HY+CMV +L R G L EA E + ++P P V +LL + G+VE+G+ + D L
Sbjct: 509 CVEHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHL 568
Query: 553 MKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFS 612
MEP +G+YV+M+NLY++ G WE +R+ MK G++K G SW + GL F
Sbjct: 569 FNMEPENTGNYVIMANLYSQAGRWEEAENIREKMKKIGLKKIPGTSWIETS--GGLRSFI 626
Query: 613 SGDNTHPRSEEIYRMAECLGSEMK 636
+ D + RSEEIY M E L M+
Sbjct: 627 ARDVSSERSEEIYGMLEGLLGLMR 650
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 142/580 (24%), Positives = 251/580 (43%), Gaps = 101/580 (17%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE------KSDDALSFALRMNLIGVV 54
+ Y KS +A +F+ + + +I SWN +L G+ + + LS L + +
Sbjct: 76 ITFYSKSNHLYEAHKVFDKILDKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLK 135
Query: 55 FDAVTYSTAL-SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
D T + L + + + ++ +++ G DS+++V NALIT YSR AR
Sbjct: 136 PDNFTITCVLKALSVLFPDSILAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARI 195
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
+FD M ++D VSWN++++GY+Q G Y L + GLR + V+ S AC
Sbjct: 196 LFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTN 255
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC-----------------EVT------ 210
+L G ++H I+ VS N L+ Y+KC EVT
Sbjct: 256 DLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVS 315
Query: 211 --------GDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVT 257
A +FR M + + +W +IS E + L +EM+ G PN VT
Sbjct: 316 GYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVT 375
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
++ S + +K G+ IH I+ + V +I YA+ ++ ++ VFD+
Sbjct: 376 LSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSK 435
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHG 376
R +I W A+IS Y+ +G + AA++ F ++ ++P+ TF +VL A
Sbjct: 436 DRSLIVWTAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACA---------- 485
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA-----WTAIIS 431
HS G + E+ ++F+E K F + ++
Sbjct: 486 ---HS------------------------GMVNEAWKIFDEMFLKYGFQPCVEHYACMVG 518
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
L+R G +M + P++ + ++L +G + G+ + D + +++E
Sbjct: 519 VLSRAGMLSEAAEFICKMP---IEPNAKVWGALLNGVSVSGDVELGKFVCDHL---FNME 572
Query: 492 P-SPDHYSCMVDMLGRVGRLEEAEEL--------VGQIPG 522
P + +Y M ++ + GR EEAE + + +IPG
Sbjct: 573 PENTGNYVIMANLYSQAGRWEEAENIREKMKKIGLKKIPG 612
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 191/570 (33%), Positives = 312/570 (54%), Gaps = 16/570 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QL++ I+ L + G + Y + G L A + F+ + ++ SWN IL+ ++++
Sbjct: 33 QLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNK 92
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ + + M+++G +D + A AC + K H ++IK+ V
Sbjct: 93 CF-YDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVA 151
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----SMNREDAV-SLFKEMRLDGVC 252
LM+ Y++ +A+KVF + +N + W MI + + E V LF MR G
Sbjct: 152 PALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFE 211
Query: 253 PNDVTFIGLIHAISIGNLV--KEGRMIHGLCIKTNFL-SEPSVCNCLITMYARFESMQDS 309
+ GLI A GN+ KEG+ HGLCIK NF+ S + L+ MY + + +
Sbjct: 212 LDPFVVEGLIQAC--GNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFA 269
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
K+F+E+S R+++ W+A+I+G+A+NG +L ++ F ++ +S PN+ TF S++ A +
Sbjct: 270 LKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSL 329
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
SLK G+ H ++I+ G++ D ++ +DMY K G I + RVF + EK+ F+W+
Sbjct: 330 G--SLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWST 387
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+I+ HG +N F EM + P+S+TF+SVL+ C +G I +G F SM +DY
Sbjct: 388 MINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDY 447
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
I P +HY+CMVD+LGR G+++EA + +P PG S +LLGACRIH E+ E +
Sbjct: 448 GITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEV 507
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL 608
A L+ +E SG YV++SN+YA+ G WEMV R M KG+ K VGF+ ++ + L
Sbjct: 508 AKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIE--EKL 565
Query: 609 HGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+ FSS D ++ +I + L M+ L
Sbjct: 566 YLFSSEDRFAYKNTQIESLWNSLKERMREL 595
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 216/449 (48%), Gaps = 23/449 (5%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y + G A FN++ ++ SWNT+L+ K+ D L RM G + D+
Sbjct: 57 YIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNL 116
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
A+ C F HSL +K L+ + YV AL+ +Y+ G L EA +VF+E+P
Sbjct: 117 VFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPL 176
Query: 121 KDSVSWNAILSGYTQ-DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
K+SV W ++ G+ ++GV + + M R G LD ACG+ + GK
Sbjct: 177 KNSVIWGVMIKGHLNFSEEFGVFELFS--RMRRSGFELDPFVVEGLIQACGNVYAGKEGK 234
Query: 180 QIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNRE 237
HG+ IK + ++ + L+ Y KC A K+F + R+V+ W+ +I+ R
Sbjct: 235 TFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARN 294
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+++S+F++M D V PN VTF ++ A S +K+GR +HG I+ +
Sbjct: 295 GRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNY 354
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK- 352
I MYA+ + + +VF ++ + + SW+ +I+G+ +GL A+ F+ + ++
Sbjct: 355 TSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQL 414
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS--DPIVG--SALLDMYGKRGSI 408
PN+ TF SVL+A + I + SH + D P+ + ++D+ G+ G I
Sbjct: 415 PNSVTFVSVLSACSHSGRI-----EEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKI 469
Query: 409 FESQRVFNE-TQEKSEFAWTAIISALARH 436
E+ N E AW A++ A H
Sbjct: 470 DEALSFINNMPTEPGASAWGALLGACRIH 498
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 140/283 (49%), Gaps = 10/283 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
MN+Y + G ++A +F + + V W ++ G F + RM G D
Sbjct: 155 MNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDP 214
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ C + G H L +K +DS ++ +L+ MY + G L A ++F+
Sbjct: 215 FVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFE 274
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E+ +D V W+AI++G+ ++G +E+I +M+ + + V+F S AC +L+
Sbjct: 275 EISYRDVVVWSAIIAGFARNGR-ALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLK 333
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+ +HG I+ G V + Y+KC A +VF ++ ++NV SW+TMI+
Sbjct: 334 QGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFG 393
Query: 234 MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
M+ +A++LF EMR PN VTF+ ++ A S ++EG
Sbjct: 394 MHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEG 436
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 5/194 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL---SFALRMNLIGVVFDA 57
++MY K G D AL +F ++ D+V W+ +++GF ++ AL S +M V ++
Sbjct: 257 VDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNS 316
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+++ + C G +H +++ G++ +V + I MY++ G +V A RVF +
Sbjct: 317 VTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQ 376
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P K+ SW+ +++G+ G EA+ EM + V+F S SAC H +E
Sbjct: 377 IPEKNVFSWSTMINGFGMHG-LCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEE 435
Query: 178 GKQIHGVSIKMGYG 191
G H S+ YG
Sbjct: 436 GWS-HFKSMSRDYG 448
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
+L + ++ I+ L + G + Y + GS+ + + FN ++ +W I++
Sbjct: 27 TLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILA 86
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
+ +++ + V+ FK M +G DS + + C + +G LF S+ +E
Sbjct: 87 SHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLF-QGAKLFHSLAIKLRLE 145
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
P ++++ +G LEEA ++ ++P
Sbjct: 146 GDPYVAPALMNVYTELGSLEEAHKVFEEVP 175
>gi|33146592|dbj|BAC79788.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 749
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 288/506 (56%), Gaps = 10/506 (1%)
Query: 88 LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
L S ++ AL+ Y R RL EA+ +FD+MP + +V+WN ++ G+ + G+ A+ A
Sbjct: 90 LASNLFATTALLAFYCRSRRLPEAQHLFDQMPARTAVTWNTLIHGHARSAAPGL-AVAAF 148
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
M R G+ S +S AC ++ G +H V + G+ V VG L+ Y+KC
Sbjct: 149 ARMARAGVSPTASSVSSVLVACVRLEDAAAGATLHSVGLMHGFCASVVVGTALVDMYAKC 208
Query: 208 EVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLI 262
G A +VFR M ++NV ++T ++ S DA+ L +EM GV PN +T+ L+
Sbjct: 209 HHLGAAQQVFREMEEKNVATFTALVAGFVLSRRPHDAMLLVREMERSGVAPNLMTYSSLL 268
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
+ + + G+ +H +K + V + L+TMY++ +++ KV +SC++ +
Sbjct: 269 SSFASPEDIDHGKQVHCAVLKKGLEHDQFVLSALVTMYSKCGILENFVKVQMSVSCQDQV 328
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
S+N++ISG + G A Q F + + + + +TF SVL A+G++ SL G++ H+
Sbjct: 329 SFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSS--SLLEGRQVHT 386
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
I+K+G DS V ++L+ MY + G+I ES VF + + +W +++S A+HG +
Sbjct: 387 LILKIGYDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKE 446
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML-KDYHIEPSPDHYSCM 500
V+ F++M V+PD ITFLSVLT C G++ KG F+ M K Y + +HY+CM
Sbjct: 447 VVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGYLVGARTEHYACM 506
Query: 501 VDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGS 560
VD+LGR G L EAE L+ +P PG SV ++LL AC+IHGN+E+ R++ L+++ P S
Sbjct: 507 VDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIVIRVSKRLIELNPHDS 566
Query: 561 GSYVLMSNLYAEKGDWEMVAILRKGM 586
+V +SN +A G W A +R+ M
Sbjct: 567 SVHVQLSNAFAGDGRWGNAAEIREAM 592
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 237/472 (50%), Gaps = 37/472 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+ YC+S + +A +F+ + V+WNT++ G +S A++ RM GV A
Sbjct: 101 LAFYCRSRRLPEAQHLFDQMPARTAVTWNTLIHGHARSAAPGLAVAAFARMARAGVSPTA 160
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S+ L C+ E G LHS+ + G + V VG AL+ MY++ L A++VF E
Sbjct: 161 SSVSSVLVACVRLEDAAAGATLHSVGLMHGFCASVVVGTALVDMYAKCHHLGAAQQVFRE 220
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ ++ A+++G+ +A+L + EM R G+ + ++++S S+ ++++
Sbjct: 221 MEEKNVATFTALVAGFVLS-RRPHDAMLLVREMERSGVAPNLMTYSSLLSSFASPEDIDH 279
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+H +K G V + L++ YSKC + + KV + ++ +S+ ++IS
Sbjct: 280 GKQVHCAVLKKGLEHDQFVLSALVTMYSKCGILENFVKVQMSVSCQDQVSFNSVISGLSC 339
Query: 234 MNR-EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ R ++A F EMR G + TF ++ AI + + EGR +H L +K + S V
Sbjct: 340 LGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQVHTLILKIGYDSVVDV 399
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ES 351
N LI+MYAR ++ +S VF + ++SWN+L+SG AQ+G V+ F + +
Sbjct: 400 QNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHV 459
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-------DSDPIVG------SAL 398
+P+ TF SVL A H ++ GL D +VG + +
Sbjct: 460 QPDHITFLSVLTACS-------------HVGLVDKGLEYFNLMKDKGYLVGARTEHYACM 506
Query: 399 LDMYGKRGSIFESQRVFNETQEKS-EFAWTAIISALARHGDYESVMNQFKEM 449
+D+ G+ G + E++ + N K + A++SA HG+ E V+ K +
Sbjct: 507 VDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIVIRVSKRL 558
>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
Length = 1026
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 187/606 (30%), Positives = 324/606 (53%), Gaps = 17/606 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K G+ D + +F + + WN+++SG+ +++ AL +M + GV DA
Sbjct: 384 VSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDA 443
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +S C + +H+ V+ +S V NAL+ MY+ G + + +F +
Sbjct: 444 TTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQK 503
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + +SWN ++SG+ + GD L +M + + D V+ S+ ++ +
Sbjct: 504 MEVRMLISWNTMISGFAEIGDSETSLTL-FCQMFHEEVWFDLVTLIGLISSLSVSEDAIV 562
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+ +H ++IK G + VS+ N L++ Y+ C + ++F RN I++ ++S R+
Sbjct: 563 GESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRK 622
Query: 238 DAVS-----LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ VS LF +M + PN VT + L+ + +G+ IH ++ E +
Sbjct: 623 NNVSEKILPLFTQMVKNDEKPNLVTLLNLL---PVCQSQLQGKCIHSYAVRNFTRLETPL 679
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KES 351
+ MY+RF +++ +F +S R +I WNA +S Q + V F ++
Sbjct: 680 FTSAMGMYSRFNNIEYCRTIFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNV 739
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ T +L + A + C + I++ G + +V +AL+D + + GSI
Sbjct: 740 RPDEVT---MLALISACSQLGNADFAACIMAVILQKGFSMNILVLNALIDTHSRCGSISF 796
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F+ + EK W A+I+A + HG+ E+ ++ F M + GV PD ITF+S+L+ C
Sbjct: 797 ARELFDSSVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACSH 856
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
NG++ +GR LF S+ D+ I P +HY+CMVD+LGR G L+EA ++V +P P ++L+
Sbjct: 857 NGLVEQGRTLFKSLQADHGITPRMEHYACMVDLLGRTGHLDEAYDIVRSMPFTPSDNLLE 916
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
SLLGACR HGN ++GE + L+K E S SYV++SN+YA G W LR M++KG
Sbjct: 917 SLLGACRFHGNYKIGESVGKLLIKSEYGKSRSYVMLSNIYASAGKWSDCEQLRLDMEAKG 976
Query: 591 VRKEVG 596
+RK VG
Sbjct: 977 LRKNVG 982
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/546 (27%), Positives = 266/546 (48%), Gaps = 18/546 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K+GQ D + +F+ + D++SWN ++SG+ + +A+ M G+ +A
Sbjct: 181 LDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNA 240
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + C + G LH+ +K G + + +ALI+MY+ + L +R VFD
Sbjct: 241 STLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDL 300
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK-NLE 176
P KD VS+N+++S Y Q ++ EA M G+ + ++ S +C +
Sbjct: 301 QPVKDLVSFNSMISAYMQHSNWK-EAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGIN 359
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+ +HG+ IK+G VSV + L+S YSK ++ +F ++N I W +MIS
Sbjct: 360 HGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYL 419
Query: 234 MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+N E A+ F +M++ GV P+ T I +I + + IH ++ F S S
Sbjct: 420 VNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQS 479
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L+ MYA + S +F ++ R +ISWN +ISG+A+ G S ++ F + E
Sbjct: 480 VMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEE 539
Query: 352 K-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ T +++++ +ED + G+ HS IK G SD + +AL+ MY G +
Sbjct: 540 VWFDLVTLIGLISSLSVSEDAIV--GESVHSLAIKSGCISDVSLTNALITMYANCGIVEA 597
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
Q++FN ++ + A++S ++ E ++ F +M +P+ +T L++L VC
Sbjct: 598 GQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVCQS 657
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G+ + ++++ +P S M M R +E + + L V
Sbjct: 658 Q---LQGKCIHSYAVRNFTRLETPLFTSAM-GMYSRFNNIEYCRTIFSLV-SARNLIVWN 712
Query: 531 SLLGAC 536
+ L AC
Sbjct: 713 AFLSAC 718
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 224/456 (49%), Gaps = 19/456 (4%)
Query: 23 PDIVSWNTVLSGFEKSDDALS---FALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQL 79
P + S N V+ F SD L L G D T+ + C G Q+
Sbjct: 104 PAVYSLNLVVRCF--SDHGFHRELLDLYRGLCGFGSDNFTFPPVIRACTAASCLQLGRQV 161
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H +++ G S V V AL+ MY++ G++ +RRVFD M +D +SWNA++SGY+ +G +
Sbjct: 162 HCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCF 221
Query: 140 GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
EA+ L EM + G+ + + CG + G +H ++K G S+ +
Sbjct: 222 R-EAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSA 280
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPN 254
L+S Y+ + + VF ++++S+ +MIS N ++A +F+ M GV PN
Sbjct: 281 LISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPN 340
Query: 255 DVTFIGLIHAIS---IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
+T + ++ + S G + G +HG+ IK + SV + L++MY++ + S
Sbjct: 341 LITLVSVLPSCSDLLFG--INHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSL 398
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAED 370
+F + + I WN++ISGY N A+ AF + I P+A T +V++ +D
Sbjct: 399 LFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKD 458
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+ + + H++ ++ +S V +ALL MY G I S +F + + + +W +I
Sbjct: 459 LHV--AKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMI 516
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
S A GD E+ + F +M ++ V D +T + +++
Sbjct: 517 SGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLIS 552
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 206/420 (49%), Gaps = 30/420 (7%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM-PNKDSV-SWNAILSGYTQ 135
++H+ + G + +V L+ Y +G+ A +F E + +V S N ++ ++
Sbjct: 59 EIHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLNLVVRCFSD 118
Query: 136 DGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
G + L+++ R G D+ +F AC L+LG+Q+H ++ G+G++
Sbjct: 119 HGFHR-----ELLDLYRGLCGFGSDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSN 173
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRL 248
V V L+ Y+K + +VF M R++ISW M+S +AV +EM+
Sbjct: 174 VGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQ 233
Query: 249 DGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
G+ PN T +G++ S G+ V G +H +K + + S+ + LI+MYA F+ +
Sbjct: 234 CGMSPNASTLVGIVGMCGSAGDRVA-GDSLHAFALKGGTIDDESLTSALISMYAAFDDLS 292
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGVIKESKPNAYTFGSVL 362
S VFD ++++S+N++IS Y Q+ A + F GV PN T SVL
Sbjct: 293 SSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGV----GPNLITLVSVL 348
Query: 363 NAVGAAEDI--SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
+ D+ + HG+ H IIK+GL V SAL+ MY K G + S +F E
Sbjct: 349 ---PSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTE 405
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
K+ W ++IS + ++ ++ F +M+ GV PD+ T ++V++ C +H + +
Sbjct: 406 KNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSI 465
>gi|297725471|ref|NP_001175099.1| Os07g0203900 [Oryza sativa Japonica Group]
gi|255677594|dbj|BAH93827.1| Os07g0203900 [Oryza sativa Japonica Group]
Length = 721
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 288/506 (56%), Gaps = 10/506 (1%)
Query: 88 LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
L S ++ AL+ Y R RL EA+ +FD+MP + +V+WN ++ G+ + G+ A+ A
Sbjct: 45 LASNLFATTALLAFYCRSRRLPEAQHLFDQMPARTAVTWNTLIHGHARSAAPGL-AVAAF 103
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
M R G+ S +S AC ++ G +H V + G+ V VG L+ Y+KC
Sbjct: 104 ARMARAGVSPTASSVSSVLVACVRLEDAAAGATLHSVGLMHGFCASVVVGTALVDMYAKC 163
Query: 208 EVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLI 262
G A +VFR M ++NV ++T ++ S DA+ L +EM GV PN +T+ L+
Sbjct: 164 HHLGAAQQVFREMEEKNVATFTALVAGFVLSRRPHDAMLLVREMERSGVAPNLMTYSSLL 223
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
+ + + G+ +H +K + V + L+TMY++ +++ KV +SC++ +
Sbjct: 224 SSFASPEDIDHGKQVHCAVLKKGLEHDQFVLSALVTMYSKCGILENFVKVQMSVSCQDQV 283
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
S+N++ISG + G A Q F + + + + +TF SVL A+G++ SL G++ H+
Sbjct: 284 SFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSS--SLLEGRQVHT 341
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
I+K+G DS V ++L+ MY + G+I ES VF + + +W +++S A+HG +
Sbjct: 342 LILKIGYDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKE 401
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML-KDYHIEPSPDHYSCM 500
V+ F++M V+PD ITFLSVLT C G++ KG F+ M K Y + +HY+CM
Sbjct: 402 VVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGYLVGARTEHYACM 461
Query: 501 VDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGS 560
VD+LGR G L EAE L+ +P PG SV ++LL AC+IHGN+E+ R++ L+++ P S
Sbjct: 462 VDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIVIRVSKRLIELNPHDS 521
Query: 561 GSYVLMSNLYAEKGDWEMVAILRKGM 586
+V +SN +A G W A +R+ M
Sbjct: 522 SVHVQLSNAFAGDGRWGNAAEIREAM 547
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 237/472 (50%), Gaps = 37/472 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+ YC+S + +A +F+ + V+WNT++ G +S A++ RM GV A
Sbjct: 56 LAFYCRSRRLPEAQHLFDQMPARTAVTWNTLIHGHARSAAPGLAVAAFARMARAGVSPTA 115
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S+ L C+ E G LHS+ + G + V VG AL+ MY++ L A++VF E
Sbjct: 116 SSVSSVLVACVRLEDAAAGATLHSVGLMHGFCASVVVGTALVDMYAKCHHLGAAQQVFRE 175
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ ++ A+++G+ +A+L + EM R G+ + ++++S S+ ++++
Sbjct: 176 MEEKNVATFTALVAGFVLS-RRPHDAMLLVREMERSGVAPNLMTYSSLLSSFASPEDIDH 234
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+H +K G V + L++ YSKC + + KV + ++ +S+ ++IS
Sbjct: 235 GKQVHCAVLKKGLEHDQFVLSALVTMYSKCGILENFVKVQMSVSCQDQVSFNSVISGLSC 294
Query: 234 MNR-EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ R ++A F EMR G + TF ++ AI + + EGR +H L +K + S V
Sbjct: 295 LGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQVHTLILKIGYDSVVDV 354
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ES 351
N LI+MYAR ++ +S VF + ++SWN+L+SG AQ+G V+ F + +
Sbjct: 355 QNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHV 414
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-------DSDPIVG------SAL 398
+P+ TF SVL A H ++ GL D +VG + +
Sbjct: 415 QPDHITFLSVLTACS-------------HVGLVDKGLEYFNLMKDKGYLVGARTEHYACM 461
Query: 399 LDMYGKRGSIFESQRVFNETQEKS-EFAWTAIISALARHGDYESVMNQFKEM 449
+D+ G+ G + E++ + N K + A++SA HG+ E V+ K +
Sbjct: 462 VDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIVIRVSKRL 513
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 177/572 (30%), Positives = 303/572 (52%), Gaps = 53/572 (9%)
Query: 92 VYVGNALITMYSRWGRLVE--------------------ARRVFDEMPNKDSVSWNAILS 131
VY+ N +++ Y++ G E A +FD++ ++D +SWN+++S
Sbjct: 27 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSMIS 86
Query: 132 GYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
GY +G E L + +MM G+ +D + S C L LGK +H ++IK +
Sbjct: 87 GYVSNG--LTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSF 144
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKE 245
++ N L+ YSKC A +VF +M +RNV+SWT+MI+ D A+ L ++
Sbjct: 145 ERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQ 204
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
M +GV + V ++HA + + G+ +H N S VCN L+ MYA+ S
Sbjct: 205 MEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGS 264
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAV 365
M+ + VF + ++IISWN ++ E KP++ T +L A
Sbjct: 265 MEGANSVFSTMVVKDIISWNTMVG--------------------ELKPDSRTMACILPAC 304
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ +L+ G+ H +I++ G SD V +AL+D+Y K G + ++ +F+ K +
Sbjct: 305 ASLS--ALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVS 362
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
WT +I+ HG + F EM + G+ PD ++F+S+L C +G++ +G F M
Sbjct: 363 WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMK 422
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
D++IEP +HY+CMVD+L R G L +A + + +P P ++ +LL CRI+ ++E+
Sbjct: 423 NDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELA 482
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDI 605
E++A+ + ++EP +G YVL++N+YAE WE V +R+ + KG+RK G SW ++
Sbjct: 483 EKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGR 542
Query: 606 DGLHGFSSGDN-THPRSEEIYRMAECLGSEMK 636
L F SG+N +HP S++I + + + +MK
Sbjct: 543 VNL--FVSGNNSSHPHSKKIESLLKKMRRKMK 572
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 233/466 (50%), Gaps = 51/466 (10%)
Query: 4 YCKSGQFDKALCIF--------------------NNLNNPDIVSWNTVLSGFEK---SDD 40
Y K G F +++C+F + L + D++SWN+++SG+ ++
Sbjct: 37 YAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTER 96
Query: 41 ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALIT 100
L +M +G+ D T + L C G +HSL +K + + N L+
Sbjct: 97 GLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLD 156
Query: 101 MYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
MYS+ G L A RVF++M ++ VSW ++++GYT+DG + AI+ L +M ++G++LD V
Sbjct: 157 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDG-WSDGAIILLQQMEKEGVKLDVV 215
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+ TS AC +L+ GK +H +++ V N LM Y+KC AN VF M
Sbjct: 216 AITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTM 275
Query: 221 HDRNVISWTTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+++ISW TM+ E++ P+ T ++ A + + ++ G+ IHG
Sbjct: 276 VVKDIISWNTMVG-----------ELK-----PDSRTMACILPACASLSALERGKEIHGY 319
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
++ + S+ V N L+ +Y + + + +FD + ++++SW +I+GY +G A
Sbjct: 320 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 379
Query: 341 VQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--S 396
+ A F ++++ +P+ +F S+L A + L+ G R +I+K + +P + +
Sbjct: 380 I-ATFNEMRDAGIEPDEVSFISILYA--CSHSGLLEQGWR-FFYIMKNDFNIEPKLEHYA 435
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFA--WTAIISALARHGDYE 440
++D+ + G++ ++ + F ET + A W A++ + D E
Sbjct: 436 CMVDLLSRTGNLSKAYK-FIETLPIAPDATIWGALLCGCRIYHDIE 480
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 197/418 (47%), Gaps = 44/418 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G D AL +F + ++VSW ++++G+ + SD A+ +M GV D
Sbjct: 155 LDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDV 214
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V ++ L C G +H I + S ++V NAL+ MY++ G + A VF
Sbjct: 215 VAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFST 274
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD +SWN ++ L+ D + AC LE
Sbjct: 275 MVVKDIISWNTMVG----------------------ELKPDSRTMACILPACASLSALER 312
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
GK+IHG ++ GY + V N L+ Y KC V G A +F + ++++SWT MI+ M
Sbjct: 313 GKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGM 372
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +A++ F EMR G+ P++V+FI +++A S L+++G + +K +F EP +
Sbjct: 373 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKL 431
Query: 293 CN--CLITMYARFESMQDSEKVFDELS-CREIISWNALISG---YAQNGLSLAAVQAFFG 346
+ C++ + +R ++ + K + L + W AL+ G Y L+ + F
Sbjct: 432 EHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFE 491
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ E+ T VL A AE + +R I K GL +P G + +++ G+
Sbjct: 492 LEPEN-----TGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNP--GCSWIEIKGR 542
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR-- 455
L+ Y G + E +RVF+ ++K+ + W ++S A+ GD++ + FK M KG+
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 456 --------------PDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
D I++ S+++ NG+ +G ++ M+
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMM 105
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 200/632 (31%), Positives = 334/632 (52%), Gaps = 17/632 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY G+ A IF+ + D +SW ++SG+EK+ D AL M L V D
Sbjct: 340 IQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDD 399
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT ++AL+ C G++LH L G V V NAL+ MY++ + +A VF
Sbjct: 400 VTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKF 459
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD VSW+++++G+ + + L M ++ + V+F +A SAC L
Sbjct: 460 MAEKDVVSWSSMIAGFCFN--HRSFDALYYFRYMLGHVKPNSVTFIAALSACAATGALRS 517
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR- 236
GK+IH ++ G G+ V N L+ Y KC T A F +++V+SW M+S
Sbjct: 518 GKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVA 577
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+SLF +M + + + A + + G +H L F+ V
Sbjct: 578 HGLGDIALSLFNQMMYTSL--GRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVV 635
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ MYA+ + + + +VF ++ ++++SW+++I+G+ N S A+ F ++ K
Sbjct: 636 ANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGHVK 695
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN+ TF + L+A A +L+ G+ H+++++ G+ S+ V +ALLD+Y K G +
Sbjct: 696 PNSVTFIAALSACAATG--ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAW 753
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
F+ EK +W ++S HG + ++ F +M G PD +TF+ ++ C R G
Sbjct: 754 AQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAG 812
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
M+ +G LF + + I P+ HY+CMVD+L RVG+L EA L+ ++P P +V +L
Sbjct: 813 MVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGAL 872
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L CRIH +VE+GE A ++++EP +VL+ +LY + G W VA +RK M+ KG+
Sbjct: 873 LNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLE 932
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
++ G SW +V + H F + D +HP+ +EI
Sbjct: 933 QDNGCSWVEVKGVT--HAFLTDDESHPQIKEI 962
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 245/458 (53%), Gaps = 13/458 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M + G+ A +F + D+ SWN ++ G+ K ++AL RM G+ D
Sbjct: 138 LSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDV 197
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ L C + G ++H+ +++FG EV V NAL+TMY++ G +V AR+VFD
Sbjct: 198 YTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDG 257
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILAL-IEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M D +SWNA+++G+ ++ + EA L L + M+ ++ + ++ TS A G +
Sbjct: 258 MAMTDCISWNAMIAGHFENHE--CEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG 315
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
K++HG ++K G+ V+ N L+ Y+ GDA K+F RM ++ +SWT MIS
Sbjct: 316 FAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYE 375
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ A+ ++ M L V P+DVT + A + + G +H L F+
Sbjct: 376 KNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVV 435
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L+ MYA+ + + + +VF ++ ++++SW+++I+G+ N S A+ F ++
Sbjct: 436 VANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGHV 495
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN+ TF + L+A A +L+ G+ H+++++ G+ S+ V +ALLD+Y K G +
Sbjct: 496 KPNSVTFIAALSACAATG--ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYA 553
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
F+ EK +W ++S HG + ++ F +M
Sbjct: 554 WAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQM 591
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 199/399 (49%), Gaps = 10/399 (2%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
+GNA+++M R+G + A RVF +MP +D SWN ++ GY + G + EA+ M+
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVG-FLEEALDLYYRMLWA 191
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G+R D +F CG + +G+++H ++ G+G V V N L++ Y+KC A
Sbjct: 192 GMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAA 251
Query: 214 NKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
KVF M + ISW MI+ + E+ + LF M + V PN +T + A +
Sbjct: 252 RKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGML 311
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ V + +HG +K F + + CN LI MY M D+ K+F + ++ +SW A+I
Sbjct: 312 SEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMI 371
Query: 329 SGYAQNGLSLAAVQAF-FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
SGY +NG A++ + + P+ T S L A + + G + H G
Sbjct: 372 SGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDV--GIKLHELAQNKG 429
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+V +ALL+MY K I ++ VF EK +W+++I+ + + F+
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFR 489
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
M V+P+S+TF++ L+ C G + G+ + +L+
Sbjct: 490 YMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLR 527
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+G+A+L M + G I+ + RVF + E+ F+W ++ + G E ++ + M G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+RPD TF VL CG GR + +L+ + D + +V M + G + A
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLR-FGFGDEVDVLNALVTMYAKCGDIVAA 251
Query: 514 EEL 516
++
Sbjct: 252 RKV 254
>gi|218186285|gb|EEC68712.1| hypothetical protein OsI_37194 [Oryza sativa Indica Group]
Length = 787
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 188/610 (30%), Positives = 322/610 (52%), Gaps = 18/610 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
MY K G+ A F ++ N D+ WN +L G+ + A+S L M+ G+ D T
Sbjct: 178 MYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYT 237
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y +A+ C + G QLH L++ L+S V N+L+ MY R + A VF ++
Sbjct: 238 YISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIR 297
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILA-LIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
KD+VSWN + SG+ D D +A+ LI+M R G + + V+F+ G ++N LG
Sbjct: 298 QKDTVSWNTMFSGFAHDED--DKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLG 355
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----- 233
QI ++ + GY +V V N +++ +C + A F + RN+++W +I+
Sbjct: 356 LQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLF 415
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
EDA+ LF+ + G P++ T+ ++ A + ++ IH + +K F S V
Sbjct: 416 SRSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVS 475
Query: 294 NCLITM-YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVIKE 350
LI A F S+Q S K+ ++ E++SW A+IS + ++GL+ + F F
Sbjct: 476 TSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDST 535
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+KP+ + +VLNA A I +H + HS ++K G + V SA++D Y K G I
Sbjct: 536 NKPDEFILATVLNACANAALI--RHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITS 593
Query: 411 SQRVFNETQEKSEFA--WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ F + A + +++A A HG +N ++EM + P TF+++L+ C
Sbjct: 594 AESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSAC 653
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +G+ F +ML Y + P +Y+C+VD+L R G L+EA+ ++ +P P +V
Sbjct: 654 SHLGLVEQGKLAFSTMLSAYGMHPERANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAV 713
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+SL+ CRIHGN ++G A+ +++M P+ G+YV +SN+YA+ G+W+ R+ M
Sbjct: 714 WRSLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRRMVQ 773
Query: 589 KGVRKEVGFS 598
++K G+S
Sbjct: 774 NKLQKVHGYS 783
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 162/583 (27%), Positives = 271/583 (46%), Gaps = 39/583 (6%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-LSFALRMNLI--GVVFDAVTY 60
Y + G D AL +F+ + + ++VSW ++S ++ L F +++I G +
Sbjct: 73 YARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFAL 132
Query: 61 STALSFC---LDHEG--FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T L+ C L H L LH + V+ GLDS +VG++L+ MY++ GR+ A+R F
Sbjct: 133 ATMLTACHSMLAHSSNKLPIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAF 192
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ NKD WNA+L GY +G +G AI ++ M GL D ++ SA AC
Sbjct: 193 AHIRNKDLTCWNAMLEGYVSNG-FGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQW 251
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
+LG+Q+H + I ++ SV N L+ Y + A VFR++ ++ +SW TM S
Sbjct: 252 DLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGF 311
Query: 234 MNREDAVSLFK---EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ ED ++F +M G PN+VTF L+ G I L + +
Sbjct: 312 AHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNV 371
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-K 349
V N +I M R + + F L+ R I++WN +I+GY S A++ F ++
Sbjct: 372 LVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSRSEDAMRLFRSLVCI 431
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQR----CHSHIIKVGLDSDPIVGSALLDMYGKR 405
+P+ +T+ +VL+A A HG R H+ I+K G S V ++L+
Sbjct: 432 GERPDEFTYSAVLSAFQEA------HGARDHEQIHAIILKQGFASCQFVSTSLIKANAAA 485
Query: 406 -GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV-RPDSITFLS 463
GS+ S ++ ++ + +W AIISA +HG + V+ F +PD +
Sbjct: 486 FGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILAT 545
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY---SCMVDMLGRVGRLEEAEELVGQI 520
VL C +I R + +LK H +H+ S +VD + G + AE +
Sbjct: 546 VLNACANAALIRHCRCIHSLVLKTGH----SNHFCVASAVVDAYAKCGEITSAESAFTAV 601
Query: 521 PGGPGLSVL-QSLLGACRIHGNVE----MGERIADALMKMEPA 558
+++ ++L A HG + + E + A + PA
Sbjct: 602 SSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPA 644
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 188/397 (47%), Gaps = 22/397 (5%)
Query: 85 KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAI 144
K G + + N L+ Y+R G L A +VFDEMP+++ VSW A++S T++G +
Sbjct: 56 KLGTLAHTFNMNYLLIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHL-GF 114
Query: 145 LALIEMMRKGLRLDHVSFTSAASAC----GHEKN-LELGKQIHGVSIKMGYGTHVSVGNV 199
+ M+R G + + + +AC H N L + +HGV+++ G ++ VG+
Sbjct: 115 RFFVSMIRSGFCPNEFALATMLTACHSMLAHSSNKLPIALSLHGVAVRAGLDSNPFVGSS 174
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPN 254
L+ Y+K A + F + ++++ W M+ + A+S M G+ P+
Sbjct: 175 LLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPD 234
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
T+I + A SI GR +H L I + S SV N L+ MY R + + VF
Sbjct: 235 RYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFR 294
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-----KPNAYTFGSVLNAVGAAE 369
++ ++ +SWN + SG+A + +A FG + + KPN TF +L GA E
Sbjct: 295 KIRQKDTVSWNTMFSGFAHDEDD----KAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKE 350
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+ SL G + + + G + +V +A+++M + G + + F ++ W I
Sbjct: 351 NASL--GLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEI 408
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I+ E M F+ + G RPD T+ +VL+
Sbjct: 409 IAGYGLFSRSEDAMRLFRSLVCIGERPDEFTYSAVLS 445
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 209/462 (45%), Gaps = 32/462 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY ++ Q + A +F + D VSWNT+ SGF +D + + M+ G +
Sbjct: 277 VDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNE 336
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+S L E GLQ+ +L + G V V NA+I M R G L A F
Sbjct: 337 VTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCS 396
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ V+WN I++GY +A+ ++ G R D ++++ SA
Sbjct: 397 LTFRNIVTWNEIIAGYGLFSR-SEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARD 455
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLM--------STYSKCEVTGDANKVFRRMHDRNVISWT 229
+QIH + +K G+ + V L+ S S ++ D+ K+ ++SW
Sbjct: 456 HEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKM-------ELVSWG 508
Query: 230 TMISMN-----REDAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
+IS ++ + LF R D P++ +++A + L++ R IH L +K
Sbjct: 509 AIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLK 568
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELS--CREIISWNALISGYAQNGLSLAAV 341
T + V + ++ YA+ + +E F +S + I +N +++ YA +GL A+
Sbjct: 569 TGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEAL 628
Query: 342 QAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALL 399
+ + K P TF ++L+A + + G+ S ++ G+ + + L+
Sbjct: 629 NLYEEMTKAKLNPTPATFVAILSACSHLGLV--EQGKLAFSTMLSAYGMHPERANYACLV 686
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
D+ ++G + E++ V + + A W ++++ HG+ +
Sbjct: 687 DLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNKQ 728
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 5/231 (2%)
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK- 352
N L+ YAR + + KVFDE+ R ++SW A++S +NG + F +I+
Sbjct: 67 NYLLIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFC 126
Query: 353 PNAYTFGSVLNAVG---AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
PN + ++L A A L H ++ GLDS+P VGS+LL MY K G I
Sbjct: 127 PNEFALATMLTACHSMLAHSSNKLPIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIA 186
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+QR F + K W A++ +G ++ M + G+ PD T++S + C
Sbjct: 187 AAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACS 246
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ GR L ++ +E + + +VDM R + E A + +I
Sbjct: 247 ISAQWDLGRQL-HCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKI 296
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 192/637 (30%), Positives = 318/637 (49%), Gaps = 81/637 (12%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q H+ I+K GL ++ ++ L++ Y+ +A V D +P + S++ ++ +++
Sbjct: 34 QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFH 93
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ A+ +M+ +GL D+ SA AC L+ +Q+HG++ G+ + V
Sbjct: 94 QFH-HALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQ 152
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVC 252
+ L+ Y KC DA++VF RM + +V+SW+ +++ ++A LF EM GV
Sbjct: 153 SSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQ 212
Query: 253 PNDVTFIGLIHAISIGNLVKE-----------------------------------GRMI 277
PN +++ G+I + L E G +I
Sbjct: 213 PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILI 272
Query: 278 HGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL------SCR------------ 319
HG IK +S+ V + LI MY + + +VFD++ SC
Sbjct: 273 HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332
Query: 320 -----------------EIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSV 361
++SW ++I+ +QNG + A++ F + I KPN+ T +
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCL 392
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L A G +L HG+ H ++ G+ +D VGSAL+DMY K G I S+ F+ K
Sbjct: 393 LPACGNIA--ALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTK 450
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+ W A+I+ A HG + M F M+ G +PD I+F VL+ C ++G+ +G + F
Sbjct: 451 NLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYF 510
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+SM Y IE +HY+CMV +L R G+LE+A ++ ++P P V +LL +CR+H N
Sbjct: 511 NSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNN 570
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
V +GE A+ L ++EP+ G+Y+L+SN+YA KG W V +R MK+KG+RK G SW +
Sbjct: 571 VSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIE 630
Query: 602 VGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
V + +H +GD +HP+ +I + L EMK L
Sbjct: 631 VK--NKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKL 665
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 181/395 (45%), Gaps = 44/395 (11%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
LD V T +L +Q H +K G + L+S Y+ DA V
Sbjct: 11 LDSVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLV 70
Query: 217 FRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
+ + NV S++T+I A+S F +M G+ P++ + A + + +
Sbjct: 71 LDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSAL 130
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
K R +HG+ + F S+ V + L+ MY + ++D+ +VFD + +++SW+AL++ Y
Sbjct: 131 KPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAY 190
Query: 332 AQ-----------------------------------NGLSLAAVQAFFGV-IKESKPNA 355
A+ +GL AV F + ++ +P+
Sbjct: 191 ARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDG 250
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
T SVL AVG ED+ + G H ++IK GL SD V SAL+DMYGK E +VF
Sbjct: 251 TTISSVLPAVGDLEDLVM--GILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVF 308
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
++ + A I L+R+G ES + F++++++G+ + +++ S++ C +NG
Sbjct: 309 DQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDI 368
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+ LF M + ++P+ C++ G + L
Sbjct: 369 EALELFREM-QIAGVKPNSVTIPCLLPACGNIAAL 402
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 189/433 (43%), Gaps = 59/433 (13%)
Query: 4 YCKSGQFDKALCIFNNLNN----PDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
Y + G D+A +F+ + + P+++SWN +++GF S +A+ L M+L G D
Sbjct: 190 YARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPD 249
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T S+ L D E + G+ +H ++K GL S+ V +ALI MY + E +VFD
Sbjct: 250 GTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFD 309
Query: 117 EMPNKDSVSWNAILSGYTQDG-------------DYG---------------------VE 142
+M + D S NA + G +++G D G +E
Sbjct: 310 QMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIE 369
Query: 143 AILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMS 202
A+ EM G++ + V+ ACG+ L GK H S++ G T V VG+ L+
Sbjct: 370 ALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALID 429
Query: 203 TYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVT 257
Y+KC + F + +N++ W +I+ ++A+ +F M+ G P+ ++
Sbjct: 430 MYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIIS 489
Query: 258 FIGLIHAISIGNLVKEGR-MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
F ++ A S L +EG + + K + C++T+ +R ++ + + +
Sbjct: 490 FTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRM 549
Query: 317 SCR-EIISWNALISG-YAQNGLSLAAVQA--FFGVIKESKP-------NAYTFGSVLNAV 365
+ W AL+S N +SL V A F ++ S P N Y + N V
Sbjct: 550 PVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFE-LEPSNPGNYILLSNIYASKGMWNEV 608
Query: 366 GAAEDISLKHGQR 378
D+ G R
Sbjct: 609 NRVRDMMKNKGLR 621
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 17/248 (6%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+ + R H +KT ++ + L++ YA D+ V D + + S++ LI
Sbjct: 29 LSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYA 88
Query: 331 YAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
+++ A+ F ++ P+ S + A +LK ++ H G D
Sbjct: 89 FSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLS--ALKPARQVHGIASVSGFD 146
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
SD V S+L+ MY K I ++ RVF+ E +W+A+++A AR G + F EM
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRH--LFDS---MLKDYHIEPSPDHYSCMVDML 504
+ GV+P+ I++ NGMI H L+ M D H+ + + +L
Sbjct: 207 GDSGVQPNLISW---------NGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVL 257
Query: 505 GRVGRLEE 512
VG LE+
Sbjct: 258 PAVGDLED 265
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K G+ + F+ + ++V WN V++G+ K+ +A+ M G D
Sbjct: 428 IDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDI 487
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
++++ LS C L EG + +S+ K+G+++ V ++T+ SR G+L +A
Sbjct: 488 ISFTCVLSACSQSGLTEEGSYY---FNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYA 544
Query: 114 VFDEMP-NKDSVSWNAILS 131
+ MP N D+ W A+LS
Sbjct: 545 MIRRMPVNPDACVWGALLS 563
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 34/195 (17%)
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+T + LN+ A SL ++ H+HI+K GL +D + + LL Y ++ V
Sbjct: 16 HTIFNCLNSTTA----SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVL 71
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ E + F+++ +I A ++ + ++ F +M +G+ PD+ S + C +
Sbjct: 72 DLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALK 131
Query: 476 KGRHL--------FDS----------------MLKDYH------IEPSPDHYSCMVDMLG 505
R + FDS ++D H EP +S +V
Sbjct: 132 PARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYA 191
Query: 506 RVGRLEEAEELVGQI 520
R G ++EA+ L ++
Sbjct: 192 RQGCVDEAKRLFSEM 206
>gi|77553408|gb|ABA96204.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 887
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 187/609 (30%), Positives = 323/609 (53%), Gaps = 18/609 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
MY K G+ A F ++ N D+ WN +L G+ + A+S L M+ G+ D T
Sbjct: 137 MYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYT 196
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y +A+ C + G QLH L++ L+S V N+L+ MY R + A VF ++
Sbjct: 197 YISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIR 256
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILA-LIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
KD+VSWN + SG+ D D +A+ LI+M R G + + V+F+ G ++N LG
Sbjct: 257 QKDTVSWNTMFSGFAHDED--DKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLG 314
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----- 233
QI ++ + GY +V V N +++ +C + A F + RN+++W +I+
Sbjct: 315 LQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLF 374
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ EDA+ LF+ + G P++ T+ ++ A + ++ IH + +K F S V
Sbjct: 375 SHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVS 434
Query: 294 NCLITM-YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVIKE 350
LI A F S+Q S K+ ++ E++SW A+IS + ++GL+ + F F
Sbjct: 435 TSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDST 494
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+KP+ + +VLNA A I +H + HS ++K G + V SA++D Y K G I
Sbjct: 495 NKPDEFILATVLNACANAALI--RHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITS 552
Query: 411 SQRVFNETQEKSEFA--WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ F + A + +++A A HG +N ++EM + P TF+++L+ C
Sbjct: 553 AESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSAC 612
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +G+ F +ML Y + P+ +Y+C+VD+L R G L+EA+ ++ +P P +V
Sbjct: 613 SHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAV 672
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+SL+ CRIHGN ++G A+ +++M P+ G+YV +SN+YA+ G+W+ R+ M
Sbjct: 673 WRSLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRRMVQ 732
Query: 589 KGVRKEVGF 597
++K G+
Sbjct: 733 NNLQKVHGY 741
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 162/583 (27%), Positives = 272/583 (46%), Gaps = 39/583 (6%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-LSFALRMNLI--GVVFDAVTY 60
Y + G D AL +F+ + + ++VSW ++S ++ L F +++I G + +
Sbjct: 32 YARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSL 91
Query: 61 STALSFC---LDHEG--FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T L+ C + H L L LH + V+ GLDS +VG++L+ MY++ GR+ A+R F
Sbjct: 92 ATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAF 151
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ NKD WNA+L GY +G +G AI ++ M GL D ++ SA AC
Sbjct: 152 AHIRNKDLTCWNAMLEGYVSNG-FGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQW 210
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
LG+Q+H + I ++ SV N L+ Y + A VFR++ ++ +SW TM S
Sbjct: 211 GLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGF 270
Query: 234 MNREDAVSLFK---EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ ED ++F +M G PN+VTF L+ G I L + +
Sbjct: 271 AHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNV 330
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-K 349
V N +I M R + + F L+ R I++WN +I+GY S A++ F ++
Sbjct: 331 LVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCI 390
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQR----CHSHIIKVGLDSDPIVGSALLDMYGKR 405
+P+ +T+ +VL+A A HG R H+ I+K G S V ++L+
Sbjct: 391 GERPDEFTYSAVLSAFQEA------HGARDHEQIHAIILKQGFASCQFVSTSLIKANAAA 444
Query: 406 -GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV-RPDSITFLS 463
GS+ S ++ ++ + +W AIISA +HG + V+ F +PD +
Sbjct: 445 FGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILAT 504
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY---SCMVDMLGRVGRLEEAEELVGQI 520
VL C +I R + +LK H +H+ S +VD + G + AE +
Sbjct: 505 VLNACANAALIRHCRCIHSLVLKTGH----SNHFCVASAVVDAYAKCGEITSAESAFTAV 560
Query: 521 PGGPGLSVL-QSLLGACRIHGNVE----MGERIADALMKMEPA 558
+++ ++L A HG + + E + A + PA
Sbjct: 561 SSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPA 603
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 187/397 (47%), Gaps = 22/397 (5%)
Query: 85 KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAI 144
K G + + N L Y+R G L A +VFDEMP+++ VSW A++S T++G +
Sbjct: 15 KLGTLAHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHL-GF 73
Query: 145 LALIEMMRKGLRLDHVSFTSAASAC----GHEKN-LELGKQIHGVSIKMGYGTHVSVGNV 199
+ M+R G + S + +AC H N L + +HGV+++ G ++ VG+
Sbjct: 74 RFFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSS 133
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPN 254
L+ Y+K A + F + ++++ W M+ + A+S M G+ P+
Sbjct: 134 LLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPD 193
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
T+I + A SI GR +H L I + S SV N L+ MY R + + VF
Sbjct: 194 RYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFR 253
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-----KPNAYTFGSVLNAVGAAE 369
++ ++ +SWN + SG+A + +A FG + + KPN TF +L GA E
Sbjct: 254 KIRQKDTVSWNTMFSGFAHDEDD----KAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKE 309
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+ SL G + + + G + +V +A+++M + G + + F ++ W I
Sbjct: 310 NASL--GLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEI 367
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I+ E M F+ + G RPD T+ +VL+
Sbjct: 368 IAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLS 404
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 209/462 (45%), Gaps = 32/462 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY ++ Q + A +F + D VSWNT+ SGF +D + + M+ G +
Sbjct: 236 VDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNE 295
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+S L E GLQ+ +L + G V V NA+I M R G L A F
Sbjct: 296 VTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCS 355
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ V+WN I++GY + +A+ ++ G R D ++++ SA
Sbjct: 356 LTFRNIVTWNEIIAGYGL-FSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARD 414
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLM--------STYSKCEVTGDANKVFRRMHDRNVISWT 229
+QIH + +K G+ + V L+ S S ++ D+ K+ ++SW
Sbjct: 415 HEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKM-------ELVSWG 467
Query: 230 TMISMN-----REDAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
+IS ++ + LF R D P++ +++A + L++ R IH L +K
Sbjct: 468 AIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLK 527
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELS--CREIISWNALISGYAQNGLSLAAV 341
T + V + ++ YA+ + +E F +S + I +N +++ YA +GL A+
Sbjct: 528 TGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEAL 587
Query: 342 QAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALL 399
+ + K P TF ++L+A + + G+ S ++ G+ + L+
Sbjct: 588 NLYEEMTKAKLNPTPATFVAILSACSHLGLV--EQGKLAFSTMLSAYGMHPARANYACLV 645
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
D+ ++G + E++ V + + A W ++++ HG+ +
Sbjct: 646 DLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNKQ 687
>gi|115486944|ref|NP_001065959.1| Os12g0109800 [Oryza sativa Japonica Group]
gi|113648466|dbj|BAF28978.1| Os12g0109800 [Oryza sativa Japonica Group]
Length = 841
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 187/609 (30%), Positives = 323/609 (53%), Gaps = 18/609 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
MY K G+ A F ++ N D+ WN +L G+ + A+S L M+ G+ D T
Sbjct: 137 MYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYT 196
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y +A+ C + G QLH L++ L+S V N+L+ MY R + A VF ++
Sbjct: 197 YISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIR 256
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILA-LIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
KD+VSWN + SG+ D D +A+ LI+M R G + + V+F+ G ++N LG
Sbjct: 257 QKDTVSWNTMFSGFAHDED--DKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLG 314
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----- 233
QI ++ + GY +V V N +++ +C + A F + RN+++W +I+
Sbjct: 315 LQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLF 374
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ EDA+ LF+ + G P++ T+ ++ A + ++ IH + +K F S V
Sbjct: 375 SHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVS 434
Query: 294 NCLITM-YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVIKE 350
LI A F S+Q S K+ ++ E++SW A+IS + ++GL+ + F F
Sbjct: 435 TSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDST 494
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+KP+ + +VLNA A I +H + HS ++K G + V SA++D Y K G I
Sbjct: 495 NKPDEFILATVLNACANAALI--RHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITS 552
Query: 411 SQRVFNETQEKSEFA--WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ F + A + +++A A HG +N ++EM + P TF+++L+ C
Sbjct: 553 AESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSAC 612
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +G+ F +ML Y + P+ +Y+C+VD+L R G L+EA+ ++ +P P +V
Sbjct: 613 SHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAV 672
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+SL+ CRIHGN ++G A+ +++M P+ G+YV +SN+YA+ G+W+ R+ M
Sbjct: 673 WRSLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRRMVQ 732
Query: 589 KGVRKEVGF 597
++K G+
Sbjct: 733 NNLQKVHGY 741
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 162/583 (27%), Positives = 272/583 (46%), Gaps = 39/583 (6%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-LSFALRMNLI--GVVFDAVTY 60
Y + G D AL +F+ + + ++VSW ++S ++ L F +++I G + +
Sbjct: 32 YARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSL 91
Query: 61 STALSFC---LDHEG--FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T L+ C + H L L LH + V+ GLDS +VG++L+ MY++ GR+ A+R F
Sbjct: 92 ATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAF 151
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ NKD WNA+L GY +G +G AI ++ M GL D ++ SA AC
Sbjct: 152 AHIRNKDLTCWNAMLEGYVSNG-FGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQW 210
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
LG+Q+H + I ++ SV N L+ Y + A VFR++ ++ +SW TM S
Sbjct: 211 GLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGF 270
Query: 234 MNREDAVSLFK---EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ ED ++F +M G PN+VTF L+ G I L + +
Sbjct: 271 AHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNV 330
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-K 349
V N +I M R + + F L+ R I++WN +I+GY S A++ F ++
Sbjct: 331 LVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCI 390
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQR----CHSHIIKVGLDSDPIVGSALLDMYGKR 405
+P+ +T+ +VL+A A HG R H+ I+K G S V ++L+
Sbjct: 391 GERPDEFTYSAVLSAFQEA------HGARDHEQIHAIILKQGFASCQFVSTSLIKANAAA 444
Query: 406 -GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV-RPDSITFLS 463
GS+ S ++ ++ + +W AIISA +HG + V+ F +PD +
Sbjct: 445 FGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILAT 504
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY---SCMVDMLGRVGRLEEAEELVGQI 520
VL C +I R + +LK H +H+ S +VD + G + AE +
Sbjct: 505 VLNACANAALIRHCRCIHSLVLKTGH----SNHFCVASAVVDAYAKCGEITSAESAFTAV 560
Query: 521 PGGPGLSVL-QSLLGACRIHGNVE----MGERIADALMKMEPA 558
+++ ++L A HG + + E + A + PA
Sbjct: 561 SSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPA 603
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 187/397 (47%), Gaps = 22/397 (5%)
Query: 85 KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAI 144
K G + + N L Y+R G L A +VFDEMP+++ VSW A++S T++G +
Sbjct: 15 KLGTLAHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHL-GF 73
Query: 145 LALIEMMRKGLRLDHVSFTSAASAC----GHEKN-LELGKQIHGVSIKMGYGTHVSVGNV 199
+ M+R G + S + +AC H N L + +HGV+++ G ++ VG+
Sbjct: 74 RFFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSS 133
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPN 254
L+ Y+K A + F + ++++ W M+ + A+S M G+ P+
Sbjct: 134 LLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPD 193
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
T+I + A SI GR +H L I + S SV N L+ MY R + + VF
Sbjct: 194 RYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFR 253
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-----KPNAYTFGSVLNAVGAAE 369
++ ++ +SWN + SG+A + +A FG + + KPN TF +L GA E
Sbjct: 254 KIRQKDTVSWNTMFSGFAHDEDD----KAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKE 309
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+ SL G + + + G + +V +A+++M + G + + F ++ W I
Sbjct: 310 NASL--GLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEI 367
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I+ E M F+ + G RPD T+ +VL+
Sbjct: 368 IAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLS 404
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 209/462 (45%), Gaps = 32/462 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY ++ Q + A +F + D VSWNT+ SGF +D + + M+ G +
Sbjct: 236 VDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNE 295
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+S L E GLQ+ +L + G V V NA+I M R G L A F
Sbjct: 296 VTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCS 355
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ ++ V+WN I++GY + +A+ ++ G R D ++++ SA
Sbjct: 356 LTFRNIVTWNEIIAGYGL-FSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARD 414
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLM--------STYSKCEVTGDANKVFRRMHDRNVISWT 229
+QIH + +K G+ + V L+ S S ++ D+ K+ ++SW
Sbjct: 415 HEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKM-------ELVSWG 467
Query: 230 TMISMN-----REDAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
+IS ++ + LF R D P++ +++A + L++ R IH L +K
Sbjct: 468 AIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLK 527
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELS--CREIISWNALISGYAQNGLSLAAV 341
T + V + ++ YA+ + +E F +S + I +N +++ YA +GL A+
Sbjct: 528 TGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEAL 587
Query: 342 QAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALL 399
+ + K P TF ++L+A + + G+ S ++ G+ + L+
Sbjct: 588 NLYEEMTKAKLNPTPATFVAILSACSHLGLV--EQGKLAFSTMLSAYGMHPARANYACLV 645
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
D+ ++G + E++ V + + A W ++++ HG+ +
Sbjct: 646 DLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNKQ 687
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 201/669 (30%), Positives = 353/669 (52%), Gaps = 63/669 (9%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDDALSFAL-RMNLIGVVFDAVTYSTA--LSFCLDHEG 72
+FN+L D+ +L FE +F+L +++ DA+ +S + L C + +
Sbjct: 5 LFNSLK--DLARKGHLLKAFE------TFSLIKLHASSANRDAILHSISSLLYSCTNLKS 56
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G QLH+ + G ++ + + L+T YS + L +A + + + WN ++S
Sbjct: 57 LPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNPLPWNLLISS 116
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Y +G +G EA+ A EM+ KG+R D+ ++ S ACG + +L+ G+++H SI YG
Sbjct: 117 YVNNGLHG-EALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHE-SINAAYGH 174
Query: 193 --HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNR---EDAVSLFKE 245
++ V N L+S Y K A ++F +M +R+ +SW +IS +R ++A LF+E
Sbjct: 175 RWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEE 234
Query: 246 MRLDGVCPNDVTF------------------------------------IGLIHAISIGN 269
MRL G N +T+ IGL IG
Sbjct: 235 MRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGA 294
Query: 270 LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALIS 329
+K G +IH I++ F +V N LITMY+R + ++ ++ +F + + + +WN+++S
Sbjct: 295 -IKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLS 353
Query: 330 GYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-G 387
GY S A F ++ +PN T S+L A +L+ G+ H +I++ G
Sbjct: 354 GYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPH--CARVANLQQGKEFHCYIMRREG 411
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
+ ++ ++L++MY + G + ++RVF+ + + + +T++I+ G+ ++ + F
Sbjct: 412 FEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFD 471
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
EM ++PD +T ++VL+ C +G++ +G LF+ M Y I P+ +H+SCMVD+ GR
Sbjct: 472 EMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRA 531
Query: 508 GRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMS 567
G L +A++++ +P P ++ +L+GACRIHGN E+GE A+ L++M+P G YVL++
Sbjct: 532 GLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPENPGYYVLIA 591
Query: 568 NLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
N++A G W +A +R M+ GVRK G +W DVG G F GD + S ++Y +
Sbjct: 592 NMHAAAGRWSKLAEVRTYMRDLGVRKAPGCTWVDVG--SGFSPFVVGDTSKHNSNDLYEL 649
Query: 628 AECLGSEMK 636
E L MK
Sbjct: 650 LEGLTDLMK 658
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 168/375 (44%), Gaps = 49/375 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G+ D A +FN + D VSWN ++S + +A M L G +
Sbjct: 185 VSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNI 244
Query: 58 VTYSTALSFCLDHEGFLFGLQLHS-------------LIVKFGLDSEV------------ 92
+T++T C+ F L+L S +I+ G S +
Sbjct: 245 ITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIKLGTVIHAS 304
Query: 93 ----------YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVE 142
V NALITMYSR L A +F + K +WN++LSGYT D E
Sbjct: 305 AIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTH-MDRSEE 363
Query: 143 AILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM-GYGTHVSVGNVLM 201
A EM+ G+ ++V+ S C NL+ GK+ H ++ G+ ++ + N L+
Sbjct: 364 ASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLV 423
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDV 256
Y++ A +VF + R+ +++T++I+ + A+ LF EM + P+ V
Sbjct: 424 EMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQV 483
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV--CNCLITMYARFESMQDSEKVFD 314
T + ++ A S LV EG ++ + T + P+V +C++ ++ R + ++KV
Sbjct: 484 TMVAVLSACSHSGLVTEGNVLFEK-MSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVIT 542
Query: 315 ELSCREIIS-WNALI 328
+ R + W L+
Sbjct: 543 SMPYRPTTAMWATLV 557
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%), Gaps = 9/243 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALR-MNLIGVVFD 56
+ MY + A +F ++ + +WN++LSG+ ++S++A SF R M G+ +
Sbjct: 321 ITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEA-SFLFREMLFSGIEPN 379
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKF-GLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT ++ L C G + H I++ G + + + N+L+ MY+R G+++ A+RVF
Sbjct: 380 YVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVF 439
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D + +D V++ ++++GY G+ G A+ EM++ ++ D V+ + SAC H +
Sbjct: 440 DSLRRRDKVTYTSLIAGYGIQGE-GKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLV 498
Query: 176 ELGKQI-HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS-WTTMIS 233
G + +S G V + ++ + + + A KV M R + W T++
Sbjct: 499 TEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVG 558
Query: 234 MNR 236
R
Sbjct: 559 ACR 561
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 191/619 (30%), Positives = 320/619 (51%), Gaps = 49/619 (7%)
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S+ LS C D + G QLH I+ G + + L+T YS + LV+A + +
Sbjct: 178 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNI 237
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
WN ++S Y ++G + +A+ A +M++KG+R D+ ++ S ACG E +L GK+
Sbjct: 238 LHPFPWNLLISSYVRNG-FCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKE 296
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM------ 234
+H + V N L+S Y KC G A +F ++ +R+ +SW +MIS+
Sbjct: 297 VHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGM 356
Query: 235 ----------------------------------NREDAVSLFKEMRLDGVCPNDVTFI- 259
N + A+ L +MR G + V I
Sbjct: 357 WNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALII 416
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
GL IG+ K G+ IH I++ F +V N LITMY+R + ++ + +F + +
Sbjct: 417 GLGACSHIGD-AKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAK 475
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQR 378
+ISWN++ISG S A ++ +PN T SVL A +L+HG+
Sbjct: 476 SLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPL--CARVANLQHGKE 533
Query: 379 CHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
H ++ + ++ +AL+DMY + G + E++RVF+ E+ + +T++I+ G
Sbjct: 534 FHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQG 593
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
+ ++ + F+EM N ++PD IT ++VL+ C +G++ +G+ LF+ M Y + P +H+
Sbjct: 594 EGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHF 653
Query: 498 SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
+CM D+ GR G L +A+E++ +P P ++ +L+GACRIH N E+GE A+ L++M+P
Sbjct: 654 ACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKP 713
Query: 558 AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNT 617
G YVL++N+YA G W +A +R M+ GVRK G +W DVG G F D +
Sbjct: 714 ENPGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAWVDVG--TGFSPFLVDDTS 771
Query: 618 HPRSEEIYRMAECLGSEMK 636
+ ++EIY + E L +K
Sbjct: 772 NANADEIYPLLEGLTMVIK 790
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 228/473 (48%), Gaps = 52/473 (10%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
I N N WN ++S + ++ ALS +M G+ D TY + L C +
Sbjct: 231 ITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELD 290
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS- 131
FG ++H I + + V NALI+MY + G++ AR +FD++P +D+VSWN+++S
Sbjct: 291 LGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISV 350
Query: 132 ----------------------------------GYTQDGDYGVEAILALIEMMRK-GLR 156
GY + G+Y + L L+ MRK G
Sbjct: 351 YASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNY--KGALELLSQMRKXGSH 408
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
LD V+ AC H + +LGK+IH +I+ +G +V N L++ YS+C+ A +
Sbjct: 409 LDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLL 468
Query: 217 FRRMHDRNVISWTTMIS----MNR-EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F+ M +++ISW ++IS M+R E+A L +EM L G+ PN VT ++ + +
Sbjct: 469 FQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANL 528
Query: 272 KEGRMIHG-LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+ G+ H + + +F + N L+ MYAR + ++ +VFD L R+ +++ ++I+G
Sbjct: 529 QHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAG 588
Query: 331 YAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GL 388
Y G AA++ F + + KP+ T +VL+A + ++ GQ + + GL
Sbjct: 589 YGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVT--QGQLLFEKMRSLYGL 646
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ + D++G+ G + +++ + K A W +I A H + E
Sbjct: 647 TPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTE 699
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 146/321 (45%), Gaps = 45/321 (14%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS--------------------------- 33
++MY K G+ A +F+ + D VSWN+++S
Sbjct: 317 ISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNI 376
Query: 34 --------GFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSL 82
G+ ++ + AL +M G D+V L C G ++HS
Sbjct: 377 IIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSF 436
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVE 142
++ V N+LITMYSR L A +F M K +SWN+I+SG D E
Sbjct: 437 AIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCH-MDRSEE 495
Query: 143 AILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG-VSIKMGYGTHVSVGNVLM 201
A L EM+ G+ ++V+ S C NL+ GK+ H ++ + + H+ + N L+
Sbjct: 496 ASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALV 555
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNRE--DAVSLFKEMRLDGVCPNDV 256
Y++ +A +VF + +R+ +++T+MI+ M E A+ LF+EM + P+ +
Sbjct: 556 DMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHI 615
Query: 257 TFIGLIHAISIGNLVKEGRMI 277
T I ++ A S LV +G+++
Sbjct: 616 TMIAVLSACSHSGLVTQGQLL 636
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 196/570 (34%), Positives = 304/570 (53%), Gaps = 19/570 (3%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ + L ++ +I + L A +VF++ D +NA++ Y+
Sbjct: 24 QIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSSQ 83
Query: 138 DYGVEAILALIEMMR--KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
V +++ MR + + D ++ AC + +E GK++HGV +++GY
Sbjct: 84 TPCVA--ISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGF 141
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNRE----DAVSLFKEM-RLD 249
+ + L++ Y C G+A +VF ++V+ W +I+ R+ D+ +FKEM +
Sbjct: 142 LQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVK 201
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE-PSVCNCLITMYARFESMQD 308
V PN+ T +GLI A +K GR IHG +K L E + LI +Y + +
Sbjct: 202 EVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDG 261
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVG 366
+ K+FDE+ + + WN+LI GY Q G SL V + S KP+ +T VL+A
Sbjct: 262 ARKLFDEIPEKNTVVWNSLICGYCQIG-SLNEVIELLREMHLSNLKPDRFTVSGVLSACA 320
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
+L G H K G+ D +G+AL+DMY K G I +++VF++ E++ W
Sbjct: 321 QMGAFNL--GNWVHRFAEKKGI-WDVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATW 377
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
AI+S A HG ES + F EM G RPDSITFL+VL C +G++ G+ FD ML+
Sbjct: 378 NAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQ 437
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
Y I P +HY CMVD+LGR G L+EA EL+ + P + V +LL AC IHGN+E+GE
Sbjct: 438 YYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEIGE 497
Query: 547 RIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDID 606
A ++K+ GSYV+++NLYA + V +R+ M KG+ K G S ++GD+
Sbjct: 498 WAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEIGDV- 556
Query: 607 GLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+H F D HPRSEEIY + + L ++K
Sbjct: 557 -VHEFVVADKMHPRSEEIYSVLDELSKKLK 585
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 229/461 (49%), Gaps = 32/461 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRM----NLIGV 53
+N + D A +FN PD +N ++ + S A+S +M N++G
Sbjct: 45 INSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILG- 103
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
D TY C G ++H +IV+ G + + ++ ++L+ Y G + A++
Sbjct: 104 --DKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQ 161
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHE 172
VFDE KD V WNA+++GY + G +++ EM+ K +R + + AC
Sbjct: 162 VFDEFDAKDVVFWNALITGYARQGMV-LDSFGVFKEMVEVKEVRPNEGTMMGLIVACIES 220
Query: 173 KNLELGKQIHGVSIK-MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
KNL+LG+ IHG +K M V + L++ Y KC A K+F + ++N + W ++
Sbjct: 221 KNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSL 280
Query: 232 I-------SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
I S+N + + L +EM L + P+ T G++ A + G +H K
Sbjct: 281 ICGYCQIGSLN--EVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKK 338
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
+ + + LI MYA+ + + KVFD+++ R + +WNA++SGYA +G + +A++
Sbjct: 339 G-IWDVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIE-L 396
Query: 345 FGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLD 400
F ++ES +P++ TF +VL+A A +++G++ +++ P V ++D
Sbjct: 397 FSEMRESGARPDSITFLAVLHA--CAHSGLVENGKQYFDLMLQY-YKIPPRVEHYGCMVD 453
Query: 401 MYGKRGSIFESQRVFN-ETQEKSEFAWTAIISALARHGDYE 440
+ G+ G + E++ + E + W A++SA + HG+ E
Sbjct: 454 LLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIE 494
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 124/271 (45%), Gaps = 5/271 (1%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+++ + IH I ++ + +I + + + +VF++ + +NA+I
Sbjct: 19 IQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRA 78
Query: 331 YAQNGLSLAAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
Y+ + A+ + + + YT+ V A A +++ G+ H I+++G
Sbjct: 79 YSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKA--CASQFAVEKGKEVHGVIVRIGY 136
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
+ D + S+LL+ Y G I +Q+VF+E K W A+I+ AR G FKE
Sbjct: 137 ELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKE 196
Query: 449 M-ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
M E K VRP+ T + ++ C + + GR + M+KD + + ++++ +
Sbjct: 197 MVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKC 256
Query: 508 GRLEEAEELVGQIPGGPGLSVLQSLLGACRI 538
G L+ A +L +IP + + G C+I
Sbjct: 257 GYLDGARKLFDEIPEKNTVVWNSLICGYCQI 287
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 196/572 (34%), Positives = 314/572 (54%), Gaps = 18/572 (3%)
Query: 76 GLQLHS-LIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
G LH+ L++ + ++ N LITMYS L A R+F MP +++VSW ++SG +
Sbjct: 39 GRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLS 98
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
Q+ + +A+ A M R G+ + +SAA A G Q+H V +++G+ T +
Sbjct: 99 QNLMH-ADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTEL 157
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLD 249
V + L YSKC + +A +VF +M ++ ++WT MI + + E AV F++M+ +
Sbjct: 158 FVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKRE 217
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEG---RMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
G+ D + + S G +K+G + IH K F E +V N LI MYA+ +
Sbjct: 218 GLVGADQHVFCSVLSASGG--LKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDV 275
Query: 307 QDSEKVFD-ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
+ + +V + ++S ++I GY + A+ + + ++ +PN +TF S++
Sbjct: 276 ESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIK- 334
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
G A L+ G + H+ +IK L D VGS L+DMYGK G I S ++FNE + +++
Sbjct: 335 -GCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDI 393
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
AW A+I+ A+HG + F M G+RP+ I F+S+LT C G++ +G F SM
Sbjct: 394 AWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSM 453
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+ + IEP +HYSC++D GR GRL+EA + + ++P P SLLGACR+ G+ E+
Sbjct: 454 KEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKEL 513
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
GE A LMK+EP +G +V +S +YA G WE V +RK M+ ++K GFSW D
Sbjct: 514 GEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSN- 572
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
H F S D +HP+ ++IY E L + +K
Sbjct: 573 -KKTHVFGSEDWSHPQQKDIYEKLEELTTRIK 603
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 234/454 (51%), Gaps = 18/454 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY AL +F + + VSW T++SG ++ DAL+ M GV
Sbjct: 63 ITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTR 122
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+A L G QLH + V+ G D+E++V + L MYS+ G L EA RVFD+
Sbjct: 123 FALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQ 182
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNLE 176
MP KD+V+W A++ GY ++G A+L+ +M R+GL D F S SA G K+
Sbjct: 183 MPQKDAVAWTAMIDGYAKNGSLEA-AVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGW 241
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR-RMHDRNVISWTTMI--- 232
L K IH K G+ V+V N L+ Y+K A++V + NV+S T+MI
Sbjct: 242 LSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGY 301
Query: 233 --SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ E+A+ ++ E+R GV PN+ TF +I ++ L+++G +H IKT+ + +
Sbjct: 302 IETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDS 361
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V + L+ MY + + S ++F+E+ R I+WNA+I+ +AQ+G A+QAF +I
Sbjct: 362 FVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYS 421
Query: 351 S-KPNAYTFGSVLNAVGAA--EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+PN F S+L A A D LK+ +S G++ S ++D YG+ G
Sbjct: 422 GIRPNHIAFVSLLTACSHAGLVDEGLKY---FYSMKEAHGIEPKEEHYSCIIDTYGRAGR 478
Query: 408 IFESQRVFNETQEK-SEFAWTAIISALARHGDYE 440
+ E+ + +E K + + W +++ A G E
Sbjct: 479 LDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKE 512
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/469 (36%), Positives = 277/469 (59%), Gaps = 11/469 (2%)
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
+ +A +AC + L G+Q+H I Y V +G L++ Y +C DA V RM
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 222 DRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
+R+V+SWTTMIS + +A+ LF +M G PN+ T ++ + S + +G+
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
+H L +KTNF S V + L+ MYA+ E++Q++ +VFD L R+++S A+ISGYAQ GL
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 337 SLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A+ F + E + N TF +++ A+ SL +G++ H+ I++ L +
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLA--SLDYGKQVHALILRKELPFFVALQ 250
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
++L+DMY K G + S+RVF+ E+S +W A++ RHG V++ FK++ +K V+
Sbjct: 251 NSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVK 309
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
PDS+T L+VL+ C G++ +G +FD+++K+ HY C++D+LGR GRLE+A
Sbjct: 310 PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALN 369
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
L+ +P S+ SLLGACR+H NV +GE +A L++MEP +G+YV++SN+YA G
Sbjct: 370 LIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGM 429
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
W+ V +RK M K V KE G SW + + +H F S + HP ++I
Sbjct: 430 WKDVFKVRKLMLEKTVTKEPGQSWIILDKV--IHTFHSSERFHPSKKDI 476
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 213/412 (51%), Gaps = 35/412 (8%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y A++ C++ G Q+H+ ++ V++G L+TMY R G L +AR V D MP
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ VSW ++SGY+Q + VEA+ I+M+R G + + + ++C +++ GK
Sbjct: 73 ERSVVSWTTMISGYSQTERH-VEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGK 131
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR--- 236
Q+H + +K + +H+ VG+ L+ Y+K E +A +VF + +R+V+S T +IS
Sbjct: 132 QVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKG 191
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
E+A+ LF+++ +G+ N VTF L+ A+S + G+ +H L ++ ++ N
Sbjct: 192 LDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN 251
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPN 354
LI MY++ + S +VFD + R ++SWNA++ GY ++GL + F + KE KP+
Sbjct: 252 SLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEVKPD 311
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS-DPIVG--SALL---------DMY 402
+ T +VL+ H ++ GLD D +V SALL D+
Sbjct: 312 SVTLLAVLSGCS-------------HGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLL 358
Query: 403 GKRGSIFESQRVF-NETQEKSEFAWTAIISALARHGDY---ESVMNQFKEME 450
G+ G + ++ + N E + W +++ A H + E V + EME
Sbjct: 359 GRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEME 410
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 197/384 (51%), Gaps = 15/384 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY + G D A + + + +VSW T++SG+ +++ +AL ++M G + +
Sbjct: 52 VTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNE 111
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +T L+ C + G Q+HSL+VK +S ++VG++L+ MY++ + EARRVFD
Sbjct: 112 YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDT 171
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P +D VS AI+SGY Q G EA+ ++ +G++ +HV+FT+ +A +L+
Sbjct: 172 LPERDVVSCTAIISGYAQKG-LDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDY 230
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNR 236
GKQ+H + ++ V++ N L+ YSKC + +VF M +R+V+SW M+ R
Sbjct: 231 GKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGR 290
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK-TNFLSEPS 291
+ +SLFK++ + V P+ VT + ++ S G LV EG I +K + L
Sbjct: 291 HGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTG 349
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG---YAQNGLSLAAVQAFFGV 347
C+I + R ++ + + + + S W +L+ +A + Q +
Sbjct: 350 HYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEM 409
Query: 348 IKESKPNAYTFGSVLNAVGAAEDI 371
E+ N ++ A G +D+
Sbjct: 410 EPENAGNYVILSNIYAAAGMWKDV 433
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/638 (29%), Positives = 313/638 (49%), Gaps = 80/638 (12%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+ TY + L C + G ++HS+I + + +G L++ Y+ G L E RRV
Sbjct: 97 LETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRV 156
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-------------------------- 148
FD M K+ WN ++S Y + GD+ L I
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDV 216
Query: 149 ------------------------EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
+MM G+ +D + S C + L LGK +H +
Sbjct: 217 ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----A 239
+IK + ++ N L+ YSKC A +VF +M +RNV+SWT+MI+ D A
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGA 336
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ L ++M +GV + V ++HA + + G+ +H N S VCN L+ M
Sbjct: 337 IILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDM 396
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFG 359
YA+ SM+ + VF + ++IISWN ++ E KP++ T
Sbjct: 397 YAKCGSMEGANSVFSTMVVKDIISWNTMVG--------------------ELKPDSRTMA 436
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
+L A + +L+ G+ H +I++ G SD V +AL+D+Y K G + ++ +F+
Sbjct: 437 CILPACASLS--ALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
K +WT +I+ HG + F EM + G+ PD ++F+S+L C +G++ +G
Sbjct: 495 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIH 539
F M D++IEP +HY+CMVD+L R G L +A + + +P P ++ +LL CRI+
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIY 614
Query: 540 GNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSW 599
++E+ E++A+ + ++EP +G YVL++N+YAE E V +R+ + KG+RK G SW
Sbjct: 615 HDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSW 674
Query: 600 ADVGDIDGLHGFSSGDN-THPRSEEIYRMAECLGSEMK 636
++ L F SG+N +HP S++I + + + +MK
Sbjct: 675 IEIKGRVNL--FVSGNNSSHPHSKKIESLLKKMRRKMK 710
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 234/466 (50%), Gaps = 51/466 (10%)
Query: 4 YCKSGQFDKALCIF--------------------NNLNNPDIVSWNTVLSGFEK---SDD 40
Y K G F +++C+F + L + D++SWN+++SG+ ++
Sbjct: 175 YAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTER 234
Query: 41 ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALIT 100
L +M +G+ D T + L C + G +HSL +K + + N L+
Sbjct: 235 GLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLD 294
Query: 101 MYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
MYS+ G L A RVF++M ++ VSW ++++GYT+DG + AI+ L +M ++G++LD V
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDG-WSDGAIILLQQMEKEGVKLDVV 353
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+ TS AC +L+ GK +H +++ V N LM Y+KC AN VF M
Sbjct: 354 AITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTM 413
Query: 221 HDRNVISWTTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+++ISW TM+ E++ P+ T ++ A + + ++ G+ IHG
Sbjct: 414 VVKDIISWNTMVG-----------ELK-----PDSRTMACILPACASLSALERGKEIHGY 457
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
++ + S+ V N L+ +Y + + + +FD + ++++SW +I+GY +G A
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517
Query: 341 VQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--S 396
+ A F ++++ +P+ +F S+L A + L+ G R +I+K + +P + +
Sbjct: 518 I-ATFNEMRDAGIEPDEVSFISILYA--CSHSGLLEQGWR-FFYIMKNDFNIEPKLEHYA 573
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFA--WTAIISALARHGDYE 440
++D+ + G++ ++ + F ET + A W A++ + D E
Sbjct: 574 CMVDLLSRTGNLSKAYK-FIETLPIAPDATIWGALLCGCRIYHDIE 618
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 195/418 (46%), Gaps = 44/418 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G D AL +F + ++VSW ++++G+ + SD A+ +M GV D
Sbjct: 293 LDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDV 352
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V ++ L C G +H I + S ++V NAL+ MY++ G + A VF
Sbjct: 353 VAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFST 412
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD +SWN ++ L+ D + AC LE
Sbjct: 413 MVVKDIISWNTMVG----------------------ELKPDSRTMACILPACASLSALER 450
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
GK+IHG ++ GY + V N L+ Y KC V G A +F + ++++SWT MI+ M
Sbjct: 451 GKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGM 510
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ +A++ F EMR G+ P++V+FI +++A S L+++G + +K +F EP +
Sbjct: 511 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKL 569
Query: 293 CN--CLITMYARFESMQDSEKVFDELS-CREIISWNALISG---YAQNGLSLAAVQAFFG 346
+ C++ + +R ++ + K + L + W AL+ G Y L+ + F
Sbjct: 570 EHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFE 629
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ E+ ++ E++ +R I K GL +P G + +++ G+
Sbjct: 630 LEPENTGYYVLLANIYAEAEKREEV-----KRMREKIGKKGLRKNP--GCSWIEIKGR 680
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 224/513 (43%), Gaps = 95/513 (18%)
Query: 126 WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVS 185
+NA + + Q GD +E + L+ M +K L+ ++ S C K+L GK++H +
Sbjct: 69 YNAKILHFCQLGD--LENAMELVCMCQKS-ELETKTYGSVLQLCAGLKSLTDGKKVHSII 125
Query: 186 IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAV 240
G ++G L+S Y+ C + +VF M +NV W M+S + ++++
Sbjct: 126 KSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI 185
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
LFK M G+ EG+
Sbjct: 186 CLFKIMVEKGI---------------------EGK------------------------- 199
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-----KPNA 355
R ES + ++FD+L R++ISWN++ISGY NGL+ + G+ K+ +
Sbjct: 200 -RPES---ASELFDKLCDRDVISWNSMISGYVSNGLT----ERGLGIYKQMMYLGIDVDL 251
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
T SVL VG A +L G+ HS IK + + LLDMY K G + + RVF
Sbjct: 252 ATIISVL--VGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVF 309
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ E++ +WT++I+ R G + + ++ME +GV+ D + S+L C R+G +
Sbjct: 310 EKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLD 369
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE---------------LVGQI 520
G+ + D +K ++ + + ++DM + G +E A +VG++
Sbjct: 370 NGKDVHD-YIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL 428
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYV--LMSNLYAEKGDWEM 578
P + +L AC +E G+ I +++ S +V + +LY + G +
Sbjct: 429 K--PDSRTMACILPACASLSALERGKEIHGYILR-NGYSSDRHVANALVDLYVKCGVLGL 485
Query: 579 VAILRKGMKSKGVRKEVGFSWADVGDIDGLHGF 611
+L + SK + SW + G+HG+
Sbjct: 486 ARLLFDMIPSKDL-----VSWTVMIAGYGMHGY 513
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 29/230 (12%)
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
+ G IH +KT F S P +C+ + + +V D +NA I +
Sbjct: 27 QNGCFIHKPSLKTTFFS-PIFRSCIPVRISATPTRTIDHQVTD---------YNAKILHF 76
Query: 332 AQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
Q G L + ++S+ T+GSVL + SL G++ HS I + D
Sbjct: 77 CQLG-DLENAMELVCMCQKSELETKTYGSVLQLCAGLK--SLTDGKKVHSIIKSNSVGVD 133
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+G L+ Y G + E +RVF+ ++K+ + W ++S A+ GD++ + FK M
Sbjct: 134 EALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE 193
Query: 452 KGV---RPDS-------------ITFLSVLTVCGRNGMIHKGRHLFDSML 485
KG+ RP+S I++ S+++ NG+ +G ++ M+
Sbjct: 194 KGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMM 243
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 192/637 (30%), Positives = 318/637 (49%), Gaps = 81/637 (12%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q H+ I+K GL ++ ++ L++ Y+ +A V D +P + S++ ++ +++
Sbjct: 34 QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFH 93
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ A+ +M+ +GL D+ SA AC L+ +Q+HG++ G+ + V
Sbjct: 94 QFH-HALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQ 152
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVC 252
+ L+ Y KC DA++VF RM + +V+SW+ +++ ++A LF EM GV
Sbjct: 153 SSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQ 212
Query: 253 PNDVTFIGLIHAISIGNLVKE-----------------------------------GRMI 277
PN +++ G+I + L E G +I
Sbjct: 213 PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILI 272
Query: 278 HGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL------SCR------------ 319
HG IK +S+ V + LI MY + + +VFD++ SC
Sbjct: 273 HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332
Query: 320 -----------------EIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSV 361
++SW ++I+ +QNG + A++ F + I KPN+ T +
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCL 392
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L A G +L HG+ H ++ G+ +D VGSAL+DMY K G I S+ F+ K
Sbjct: 393 LPACGNIA--ALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTK 450
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+ W A+I+ A HG + M F M+ G +PD I+F VL+ C ++G+ +G + F
Sbjct: 451 NLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYF 510
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+SM Y IE +HY+CMV +L R G+LE+A ++ ++P P V +LL +CR+H N
Sbjct: 511 NSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNN 570
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
V +GE A+ L ++EP+ G+Y+L+SN+YA KG W V +R MK+KG+RK G SW +
Sbjct: 571 VSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIE 630
Query: 602 VGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
V + +H +GD +HP+ +I + L EMK L
Sbjct: 631 VK--NKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKL 665
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 203/443 (45%), Gaps = 80/443 (18%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++ Y + F A + + + P++ S++T++ F K ALS +M G++ D
Sbjct: 55 LSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDN 114
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+A+ C Q+H + G DS+ +V ++L+ MY + ++ +A RVFD
Sbjct: 115 RVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDR 174
Query: 118 MPNKDSVSWNAILSGYTQD-------------GDYGV---------------------EA 143
M D VSW+A+++ Y + GD GV EA
Sbjct: 175 MFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEA 234
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
+L ++M +G D + +S A G ++L +G IHG IK G + V + L+
Sbjct: 235 VLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDM 294
Query: 204 YSKCEVTGDANKV-------------------------------FRRMHDR----NVISW 228
Y KC T + ++V FR++ D+ NV+SW
Sbjct: 295 YGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSW 354
Query: 229 TTMI---SMNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
T+MI S N D A+ LF+EM++ GV PN VT L+ A + G+ H ++
Sbjct: 355 TSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLR 414
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
++ V + LI MYA+ +Q S FD + + ++ WNA+I+GYA +G + A++
Sbjct: 415 RGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAME- 473
Query: 344 FFGVIKES--KPNAYTFGSVLNA 364
F +++ S KP+ +F VL+A
Sbjct: 474 IFDLMQRSGQKPDIISFTCVLSA 496
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 181/395 (45%), Gaps = 44/395 (11%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
LD V T +L +Q H +K G + L+S Y+ DA V
Sbjct: 11 LDSVQHTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLV 70
Query: 217 FRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
+ + NV S++T+I A+S F +M G+ P++ + A + + +
Sbjct: 71 LDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSAL 130
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
K R +HG+ + F S+ V + L+ MY + ++D+ +VFD + +++SW+AL++ Y
Sbjct: 131 KPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAY 190
Query: 332 AQ-----------------------------------NGLSLAAVQAFFGV-IKESKPNA 355
A+ +GL AV F + ++ +P+
Sbjct: 191 ARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDG 250
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
T SVL AVG ED+ + G H ++IK GL SD V SAL+DMYGK E +VF
Sbjct: 251 TTISSVLPAVGDLEDLVM--GILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVF 308
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
++ + A I L+R+G ES + F++++++G+ + +++ S++ C +NG
Sbjct: 309 DQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDM 368
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+ LF M + ++P+ C++ G + L
Sbjct: 369 EALELFREM-QIAGVKPNSVTIPCLLPACGNIAAL 402
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 193/435 (44%), Gaps = 63/435 (14%)
Query: 4 YCKSGQFDKALCIFNNLNN----PDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
Y + G D+A +F+ + + P+++SWN +++GF S +A+ L M+L G D
Sbjct: 190 YARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPD 249
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T S+ L D E + G+ +H ++K GL S+ V +ALI MY + E +VFD
Sbjct: 250 GTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFD 309
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAAS-------- 167
+M + D S NA + G +++G VE+ L L ++ +G+ L+ VS+TS +
Sbjct: 310 QMDHMDVGSCNAFIFGLSRNGQ--VESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRD 367
Query: 168 ---------------------------ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
ACG+ L GK H S++ G T V VG+ L
Sbjct: 368 MEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSAL 427
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPND 255
+ Y+KC + F + +N++ W +I+ ++A+ +F M+ G P+
Sbjct: 428 IDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDI 487
Query: 256 VTFIGLIHAISIGNLVKEGR-MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
++F ++ A S L +EG + + K + C++T+ +R ++ + +
Sbjct: 488 ISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIR 547
Query: 315 ELSCR-EIISWNALISG-YAQNGLSLAAVQA--FFGVIKESKP-------NAYTFGSVLN 363
+ + W AL+S N +SL V A F ++ S P N Y + N
Sbjct: 548 RMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFE-LEPSNPGNYILLSNIYASKGMWN 606
Query: 364 AVGAAEDISLKHGQR 378
V D+ G R
Sbjct: 607 EVNRVRDMMKNKGLR 621
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 17/248 (6%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+ + R H +KT ++ + L++ YA D+ V D + + S++ LI
Sbjct: 29 LSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYA 88
Query: 331 YAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
+++ A+ F ++ P+ S + A +LK ++ H G D
Sbjct: 89 FSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLS--ALKPARQVHGIASVSGFD 146
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
SD V S+L+ MY K I ++ RVF+ E +W+A+++A AR G + F EM
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRH--LFDS---MLKDYHIEPSPDHYSCMVDML 504
+ GV+P+ I++ NGMI H L+ M D H+ + + +L
Sbjct: 207 GDSGVQPNLISW---------NGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVL 257
Query: 505 GRVGRLEE 512
VG LE+
Sbjct: 258 PAVGDLED 265
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K G+ + F+ + ++V WN V++G+ K+ +A+ M G D
Sbjct: 428 IDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDI 487
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
++++ LS C L EG + +S+ K+G+++ V ++T+ SR G+L +A
Sbjct: 488 ISFTCVLSACSQSGLTEEGSYY---FNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYA 544
Query: 114 VFDEMP-NKDSVSWNAILS 131
+ MP N D+ W A+LS
Sbjct: 545 MIRRMPVNPDACVWGALLS 563
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 34/195 (17%)
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+T + LN+ A SL ++ H+HI+K GL +D + + LL Y ++ V
Sbjct: 16 HTILNCLNSTTA----SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVL 71
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ E + F+++ +I A ++ + ++ F +M +G+ PD+ S + C +
Sbjct: 72 DLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALK 131
Query: 476 KGRHL--------FDS----------------MLKDYH------IEPSPDHYSCMVDMLG 505
R + FDS ++D H EP +S +V
Sbjct: 132 PARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYA 191
Query: 506 RVGRLEEAEELVGQI 520
R G ++EA+ L ++
Sbjct: 192 RQGCVDEAKRLFSEM 206
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 300/558 (53%), Gaps = 11/558 (1%)
Query: 85 KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAI 144
+FGL + Y+ N ++ + R +F ++ + WN ++ G + D +AI
Sbjct: 39 RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSN-DCFDDAI 97
Query: 145 LALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTY 204
M +G ++ +F AC +L+LG +IH + +K G+ V V L+ Y
Sbjct: 98 EFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLY 157
Query: 205 SKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFI 259
+KC DA+KVF + D+NV+SWT +IS +A+ +F+ + + P+ T +
Sbjct: 158 AKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIV 217
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
++ A + + G IH ++ + V L+ MYA+ +M+ + VFD + +
Sbjct: 218 RVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEK 277
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQR 378
+I+SW A+I GYA NGL A+ F + +E+ KP+ YT VL+A A +L+ G+
Sbjct: 278 DIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSA--CARLGALELGEW 335
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
+ + +P++G+AL+D+Y K GS+ + VF +EK W AIIS LA +G
Sbjct: 336 VSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGY 395
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS 498
+ F ++E G++PD TF+ +L C G++ +GR F+SM + + + PS +HY
Sbjct: 396 VKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYG 455
Query: 499 CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPA 558
CMVD+LGR G L+EA +L+ +P V +LLGACRIH + ++ E L+++EP
Sbjct: 456 CMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPW 515
Query: 559 GSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTH 618
SG+YVL+SN+Y+ W+ A +R M K ++K G SW +V I +H F GD H
Sbjct: 516 NSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGI--VHEFLVGDKYH 573
Query: 619 PRSEEIYRMAECLGSEMK 636
P SE+IY + L +MK
Sbjct: 574 PLSEKIYAKLDELTKKMK 591
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 228/450 (50%), Gaps = 19/450 (4%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + P+I WNT++ G +D DA+ F M G + + T+ L C
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G+++H+L+VK G D +V+V +L+ +Y++ G L +A +VFD++P+K+ VSW AI+SG
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Y G + EAI ++ L D + SAC +L G+ IH ++MG
Sbjct: 188 YIGVGKFR-EAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVR 246
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMR 247
+V VG L+ Y+KC A VF M +++++SW MI ++N ++A+ LF +M+
Sbjct: 247 NVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQ 306
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
+ V P+ T +G++ A + ++ G + GL + FL P + LI +YA+ SM
Sbjct: 307 RENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMS 366
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVG 366
+ +VF + ++ + WNA+ISG A NG + F V K KP+ TF +L G
Sbjct: 367 RAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLL--CG 424
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIFES-QRVFNETQEKSE 423
+ G+R + + + P + ++D+ G+ G + E+ Q + N E +
Sbjct: 425 CTHAGLVDEGRRYFNSMYRF-FSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANA 483
Query: 424 FAWTAIISALARHGDY---ESVMNQFKEME 450
W A++ A H D E + Q E+E
Sbjct: 484 IVWGALLGACRIHRDTQLAELALKQLIELE 513
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 169/340 (49%), Gaps = 19/340 (5%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG------FEKSDDALSFALRMNLIGVVFD 56
+Y K G + A +F+++ + ++VSW ++SG F ++ D L MNL D
Sbjct: 156 LYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAP---D 212
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ T LS C G +H I++ G+ V+VG +L+ MY++ G + +AR VFD
Sbjct: 213 SFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFD 272
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP KD VSW A++ GY +G EAI ++M R+ ++ D + SAC LE
Sbjct: 273 GMPEKDIVSWGAMIQGYALNG-LPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALE 331
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
LG+ + G+ + + + +G L+ Y+KC A +VF+ M +++ + W +IS
Sbjct: 332 LGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLA 391
Query: 234 MNREDAVS--LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
MN +S LF ++ G+ P+ TFIGL+ + LV EGR + F PS
Sbjct: 392 MNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRF-FSLTPS 450
Query: 292 V--CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALI 328
+ C++ + R + ++ ++ + I W AL+
Sbjct: 451 IEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 490
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 10/243 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G +KA +F+ + DIVSW ++ G+ + +A+ L+M V D
Sbjct: 255 VDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDC 314
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T LS C G + L+ + +G ALI +Y++ G + A VF
Sbjct: 315 YTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKG 374
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
M KD V WNAI+SG +G V+ L + K G++ D +F C H ++
Sbjct: 375 MKEKDRVVWNAIISGLAMNG--YVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVD 432
Query: 177 LGKQIHGVSIKMGYGTHVSVGN--VLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMIS 233
G++ S+ + S+ + ++ + + +A+++ R M + N I W ++
Sbjct: 433 EGRRYFN-SMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLG 491
Query: 234 MNR 236
R
Sbjct: 492 ACR 494
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 93/218 (42%), Gaps = 26/218 (11%)
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
++ GL D + + +L ++ +F++ ++ + F W +I L + ++ +
Sbjct: 38 LRFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAI 97
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYS 498
+ M ++G P++ TF VL C R + G + ++K D ++ S
Sbjct: 98 EFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTS----- 152
Query: 499 CMVDMLGRVGRLEEAEELVGQIPGGPGLS---VLQSLLGACRIHGNVEMGERIADALMKM 555
+V + + G LE+A ++ IP +S ++ +G + ++M R+ + M +
Sbjct: 153 -LVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLE--MNL 209
Query: 556 EPAGSGSYVLMSNLYA-------EKGDWEMVAILRKGM 586
P S+ ++ L A G+W I+ GM
Sbjct: 210 AP---DSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGM 244
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 205/646 (31%), Positives = 336/646 (52%), Gaps = 36/646 (5%)
Query: 4 YCKSGQFDKALCIFNNLN----NPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
+ ++G+ D AL + P + SWN ++SG ++ +DAL RM +
Sbjct: 294 FARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPN 353
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T ++ L C + G +H + K G+ VYV ++I MYS+ G A +VF
Sbjct: 354 IITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFX 413
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKN- 174
+ NK++ WN +++ Y +G VE L L+ M+K G + D +++ + S GH +N
Sbjct: 414 KAENKNTAMWNEMIAAYVNEGK--VEDALGLLRSMQKDGWKPDVITYNTILS--GHARNG 469
Query: 175 -LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
++ ++MG +V NVL+S + + ++ +A KVFR M +
Sbjct: 470 LKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQ-------SPSDG 522
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
N + ++L MR PN +T G + A + NL +G+ IHG ++ F V
Sbjct: 523 CNPNEVLNL--SMR-----PNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVS 575
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
+ L+ MYA+ M + KVF + R +SWNAL++GY N A++ F ++ E +
Sbjct: 576 SALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQ 635
Query: 353 PNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDS-DPIVGSALLDMYGKRGSIFE 410
P++ TF + A G DI+ ++ G+ H + K LD + SAL+DMY K GSI +
Sbjct: 636 PSSITFMILFPACG---DIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILD 692
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF+ EK W A+ISA + HG + F +ME G+ PD ITF+S+L+ C R
Sbjct: 693 AKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACAR 752
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G++ +G F+SM Y + + +HY+CMV +LG G L+EA + + Q+P P +
Sbjct: 753 DGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWA 812
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL ACR+H N E+GER A AL ++EP + +Y+L+SN+Y G W+ LR M+ +
Sbjct: 813 TLLQACRVHSNPEIGERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRK 872
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ S+ VG F G+++HP EEI + L +M+
Sbjct: 873 LLTIKECSYLTVG--SHXCTFKGGESSHPELEEILETWDXLARKME 916
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 182/377 (48%), Gaps = 32/377 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K G +D A +F N + WN +++ + K +DAL M G D
Sbjct: 396 IDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDV 455
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+TY+T LS + +L S +V+ GL V N LI+ + + G EA +VF
Sbjct: 456 ITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRI 515
Query: 118 MPNK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M + D + N E++ +R + ++ T A AC
Sbjct: 516 MQSPSDGCNPN---------------------EVLNLSMRPNPITITGALPACADLNLWC 554
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GK+IHG +++ G+ ++ V + L+ Y+KC ANKVF R+ RN +SW +++
Sbjct: 555 QGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYI 614
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS-EP 290
E+A+ LF EM +G+ P+ +TF+ L A ++ GR +HG K +
Sbjct: 615 NNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKN 674
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
++ + LI MYA+ S+ D++ VFD +++ WNA+IS ++ +G++ A F + +
Sbjct: 675 AIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELL 734
Query: 350 ESKPNAYTFGSVLNAVG 366
P+ TF S+L+A
Sbjct: 735 GIXPDHITFVSLLSACA 751
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 118/525 (22%), Positives = 220/525 (41%), Gaps = 54/525 (10%)
Query: 3 MYCKSG-QFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAV 58
+YCK+ + A + + + N + ++ ++ + E+ D+ S M G++ D
Sbjct: 125 LYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKY 184
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T L C G +H +++ ++S+V+VGNALI YS G L +R VF M
Sbjct: 185 LVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSM 244
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+D VSW A++S Y ++G EA M G++ D +S+++ S ++L
Sbjct: 245 QERDVVSWTALISAYMEEG-LXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLA 303
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED 238
+ + G V+ N ++ S C G ED
Sbjct: 304 LETLEEMPERGLQPTVNSWNGII---SGCVQNG-----------------------YLED 337
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
A+ +F M PN +T ++ A + ++ G+ IH + K + V +I
Sbjct: 338 ALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVID 397
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYT 357
MY++ S +EKVF + + WN +I+ Y G A+ + K+ KP+ T
Sbjct: 398 MYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVIT 457
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
+ ++L+ G A + S ++++GL + + + L+ + + G +E+ +VF
Sbjct: 458 YNTILS--GHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRI 515
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
Q S+ E+ N +RP+ IT L C + +G
Sbjct: 516 MQSPSDGC-------------------NPNEVLNLSMRPNPITITGALPACADLNLWCQG 556
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+ + L++ EP+ S +VDM + ++ A ++ +I G
Sbjct: 557 KEIHGYTLRN-GFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDG 600
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 146/284 (51%), Gaps = 9/284 (3%)
Query: 271 VKEGRMIHGLCIKTNFLS-EPSVCNCLITMYARFE-SMQDSEKVFDELSCREIISWNALI 328
+ E R IH +K N L + S+ N L+ +Y + + S++D+ K+ DE+ R + ++ ALI
Sbjct: 96 LSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALI 155
Query: 329 SGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
Y ++ F ++ E P+ Y ++L A A + + G+ H +I+
Sbjct: 156 RSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAM--LLXRIGKMVHGFVIRKS 213
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
++SD VG+AL+ Y G + S+ VF+ QE+ +WTA+ISA G + + F
Sbjct: 214 VESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFH 273
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
M+ GV+PD I++ ++L+ RNG I + M + ++P+ + ++ ++ +
Sbjct: 274 LMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEM-PERGLQPTVNSWNGIISGCVQN 332
Query: 508 GRLEEAEELVGQI---PGGPGLSVLQSLLGACRIHGNVEMGERI 548
G LE+A ++ ++ P P + + S+L AC + +G+ I
Sbjct: 333 GYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAI 376
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 149/355 (41%), Gaps = 60/355 (16%)
Query: 179 KQIHGVSIKM-GYGTHVSVGNVLMSTYSKCEVT-GDANKVFRRMHDRNVISWTTMI---- 232
+QIH +K+ S+GN L+ Y K + + DA K+ + +R V ++ +I
Sbjct: 100 RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYC 159
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
S ++ S F+ M +G+ P+ ++ A S L + G+M+HG I+ + S+
Sbjct: 160 RSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVF 219
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI Y+ + S VF + R+++SW ALIS Y + GL A F
Sbjct: 220 VGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIF------- 272
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFE 410
H++++ G+ D I SALL + + G I
Sbjct: 273 ------------------------------HLMQLDGVKPDLISWSALLSGFARNGEIDL 302
Query: 411 SQRVFNETQEK----SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ E E+ + +W IIS ++G E ++ F M P+ IT S+L
Sbjct: 303 ALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILP 362
Query: 467 VCGRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
C + G+ + K + ++E S ++DM + G + AE++
Sbjct: 363 ACTGLKALRLGKAIHXIAXKHGIVGNVYVEGS------VIDMYSKCGSYDYAEKV 411
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 7/242 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K D A +F ++ + VSWN +++G+ ++ ++AL L M G+ +
Sbjct: 579 VDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSS 638
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDS-EVYVGNALITMYSRWGRLVEARRVFD 116
+T+ C D FG LH K LD + + +ALI MY++ G +++A+ VFD
Sbjct: 639 ITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFD 698
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
KD WNA++S ++ G A +M G+ DH++F S SAC + +E
Sbjct: 699 SEVEKDVPLWNAMISAFSVHG-MARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVE 757
Query: 177 LG-KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMISM 234
G K + + I G + ++ + +A R+M + + W T++
Sbjct: 758 EGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQA 817
Query: 235 NR 236
R
Sbjct: 818 CR 819
>gi|302817788|ref|XP_002990569.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
gi|300141737|gb|EFJ08446.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
Length = 564
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 185/575 (32%), Positives = 305/575 (53%), Gaps = 24/575 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALS-FALRMNLIGVVFDAV 58
MY K G ++A +FN++ SWN +L + + D AL F +++ G+ D V
Sbjct: 1 MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ TA + C G Q HS V+ GL+S + + +AL+ MY R G EAR++FD +
Sbjct: 61 TFVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRI 120
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P K+ V WN +++ Y Q+G + EA+ +M L+ D V+F + AC LE G
Sbjct: 121 PVKNVVCWNVMIAAYAQNGHFS-EALELYYDM---NLKPDRVTFLNVLHAC----TLESG 172
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+ IH + G VGN L++ + KC DA +VF R+ R+VISW ++S+
Sbjct: 173 RLIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQ 232
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+R++A LFK M G+ PN VT++ L+ A S +++ R IH + V
Sbjct: 233 GHRKEAFELFKRMDKAGLQPNSVTYLSLLPACSS---LEQLREIHQELADQGLEQDEQVG 289
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N LIT Y +F S++DS VF+ + R ++SW +I G ++G A+ + ++ E +
Sbjct: 290 NTLITAYNKF-SLEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVR 348
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+A L+A + E+ L G++ H + + +D V +A+++MYGK G E++
Sbjct: 349 PDAVALVCALDACTSVEN--LAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAE 406
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
VF + + W ++I A A+HG + ++ ME G RPD +T L L C G
Sbjct: 407 AVFQGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLG 466
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ + R + M++DY +E P H+ C+VD+ R G ++EAEEL+ +P P +S +L
Sbjct: 467 LLDRAREFYSGMVEDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWTAL 526
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMS 567
L AC+ H ++E G A +++ S +V++S
Sbjct: 527 LNACKAHNDMERGAWAACKAHELDSRRSSPFVVLS 561
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 234/452 (51%), Gaps = 27/452 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
MNMY + G ++A IF+ + ++V WN +++ + ++ +AL MNL D
Sbjct: 101 MNMYGRCGSAEEARKIFDRIPVKNVVCWNVMIAAYAQNGHFSEALELYYDMNLKP---DR 157
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ L C G L +H +V GL+ + +VGNAL+ M+ + G L +A+RVFD
Sbjct: 158 VTFLNVLHACTLESGRL----IHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDR 213
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +D +SWNA++S Y Q G + EA M + GL+ + V++ S AC +LE
Sbjct: 214 IAFRDVISWNALMSVYIQQG-HRKEAFELFKRMDKAGLQPNSVTYLSLLPAC---SSLEQ 269
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
++IH G VGN L++ Y+K + D+ VF RM R+V+SWT MI E
Sbjct: 270 LREIHQELADQGLEQDEQVGNTLITAYNKFSLE-DSVAVFERMKRRSVVSWTCMIMGMVE 328
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
A+ L++EM ++GV P+ V + + A + + EGR IH L T +++ V
Sbjct: 329 HGYGGRALDLYREMVVEGVRPDAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFV 388
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
++ MY + ++E VF + + +WN+LI YAQ+G + A++ + + + +
Sbjct: 389 ATAVVNMYGKCGKFAEAEAVFQGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGT 448
Query: 352 KPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSIF 409
+P+ T +L A+ A + L + +S +++ +++ P L+D++ + G I
Sbjct: 449 RPDGVT---LLCALFACSHLGLLDRAREFYSGMVEDYQVEAVPAHFGCLVDLFCRAGWID 505
Query: 410 ESQRVFNETQEKSEF-AWTAIISALARHGDYE 440
E++ + + AWTA+++A H D E
Sbjct: 506 EAEELIASMPVRPHISAWTALLNACKAHNDME 537
>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
Length = 941
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/587 (31%), Positives = 308/587 (52%), Gaps = 22/587 (3%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
++Y K + A +F+++ D VSWN ++S + K DA+ + +M + G V D +
Sbjct: 354 SLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDI 413
Query: 59 TYSTALSFCL---------DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
T+ T L C + + G Q+HS ++ GLD + Y+GN L+ MY R G L
Sbjct: 414 TFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLD 473
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
+AR F + ++ SW ++S Q+G+ E + L M +G + ++F S AC
Sbjct: 474 DARAAFQGIHQRNVFSWTILISLLVQNGE-ASEGLELLKSMDLEGTEANKITFISLLGAC 532
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
+L LGK IH G + + N L++ Y+ CE +A VF RM R+V+SWT
Sbjct: 533 SVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWT 592
Query: 230 TMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
+IS +A+ L++ M + P+ VT I ++ A + + EG+ IH + +
Sbjct: 593 IIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVAS 652
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
++ V +++ Y + E+++D+ +VFD + ++I+ WNA+I YAQN A +
Sbjct: 653 GVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALY 712
Query: 345 FGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+++ + PN T ++L++ + ++ G H G S V +AL++MY
Sbjct: 713 LEMVENQMPPNDVTLITLLDSCSST--CKMERGSSLHREAAARGYLSHTSVVNALINMYA 770
Query: 404 KR-GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K G++ +Q F K+ +W++I++A AR+G+ + N F M GV P+ +TF
Sbjct: 771 KCCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFT 830
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
SVL C G+ +G F SM D+H+EP+P+HY CMV++L + GR+++A + +P
Sbjct: 831 SVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPV 890
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNL 569
P S +SLLGAC +H + E G A L+ EP S +YVL+ N+
Sbjct: 891 QPDASAWRSLLGACEVHTDKEYGALAAKQLLDAEPRNSAAYVLLYNI 937
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 149/496 (30%), Positives = 257/496 (51%), Gaps = 19/496 (3%)
Query: 1 MNMYCK-SGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVT 59
++MY K S D+A +F ++ P ++SW+ ++ + + +A+ MNL GV +A T
Sbjct: 254 ISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHWEAIKTFELMNLEGVKPNATT 313
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++ L C G ++H+L++ V NA ++Y++ R+ +A RVF +P
Sbjct: 314 LTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIP 373
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC---------G 170
KD+VSWNAI+S Y + G + +AI +M +G D ++F + +C G
Sbjct: 374 CKDAVSWNAIVSAYAKQGLFR-DAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYG 432
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ K+L G+Q+H I G +GN+L+ Y +C DA F+ +H RNV SWT
Sbjct: 433 NSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTI 492
Query: 231 MISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+IS+ + + L K M L+G N +TFI L+ A S+ + G+ IH
Sbjct: 493 LISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKG 552
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
S+ N L+ MY ES+ ++ VF+ + R+++SW +IS YA G L A+Q +
Sbjct: 553 LESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYR 612
Query: 346 GVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ +E S+P+A T SVL A + +L G+ H I+ G+++D VG+A++ YGK
Sbjct: 613 RMEQEFSRPDAVTLISVLEACASLR--ALVEGKAIHERIVASGVETDVFVGTAVVSFYGK 670
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
++ ++++VF+ +K W A+I A A++ E + EM + P+ +T +++
Sbjct: 671 CEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITL 730
Query: 465 LTVCGRNGMIHKGRHL 480
L C + +G L
Sbjct: 731 LDSCSSTCKMERGSSL 746
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/498 (29%), Positives = 253/498 (50%), Gaps = 19/498 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWN---TVLSGFEKSDDALSFALRMNLIGVVFDAVT 59
MY K G ++A F+ + D++SWN TV + E A+ L G D VT
Sbjct: 54 MYGKCGSVEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVT 113
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+++ L+ C FG LH + S+ V N LI+MYS G L +A VF+
Sbjct: 114 FASLLNACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSF 173
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
D +W +++ YT+ G A +M ++GLR + ++F + C + LE GK
Sbjct: 174 RPDVCTWTTVIAAYTRHGKLEC-AFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGK 232
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD-ANKVFRRMHDRNVISWTTMISMNRE- 237
+H +++ G + + N L+S Y KC D A +VF R+ +VISW+ I+ +
Sbjct: 233 HVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQH 292
Query: 238 -DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
+A+ F+ M L+GV PN T ++ A + ++GR IH L + + +V N
Sbjct: 293 WEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAA 352
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK---P 353
++YA+ + D+ +VF + C++ +SWNA++S YA+ GL A+ F + + P
Sbjct: 353 ASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAI--FLSRQMQVEGFVP 410
Query: 354 NAYTFGSVLNAVGAAEDI-------SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ TF ++L + + + SL G++ HS +I GLD D +G+ L+ MYG+ G
Sbjct: 411 DDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCG 470
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
S+ +++ F +++ F+WT +IS L ++G+ + K M+ +G + ITF+S+L
Sbjct: 471 SLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLG 530
Query: 467 VCGRNGMIHKGRHLFDSM 484
C G + G+ + + +
Sbjct: 531 ACSVTGDLSLGKTIHERI 548
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 154/539 (28%), Positives = 267/539 (49%), Gaps = 26/539 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY G D A +F PD+ +W TV++ + K + A + +M+ G+ +
Sbjct: 153 ISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNE 212
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV-EARRVFD 116
+T+ T L C E G +H L + GLD + + N+LI+MY + R EAR VF
Sbjct: 213 ITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFL 272
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +SW+A ++ Y Q EAI M +G++ + + TS AC E
Sbjct: 273 RISRPSVISWSAFIAAYGQHW----EAIKTFELMNLEGVKPNATTLTSVLRACATVGAHE 328
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G++IH + + Y + +V N S Y+KC DA++VF + ++ +SW ++S
Sbjct: 329 QGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYA 388
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE---------GRMIHGLCI 282
+ DA+ L ++M+++G P+D+TFI ++++ S L+K+ GR +H I
Sbjct: 389 KQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMI 448
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
+ + N L+ MY R S+ D+ F + R + SW LIS QNG + ++
Sbjct: 449 SNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLE 508
Query: 343 AFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
+ ++ ++ N TF S+L A D+SL G+ H I GL+SD I +ALL+M
Sbjct: 509 LLKSMDLEGTEANKITFISLLGACSVTGDLSL--GKTIHERIRTKGLESDIITSNALLNM 566
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y S+ E++ VF + +WT IISA A G + ++ ME + RPD++T
Sbjct: 567 YTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTL 626
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+SVL C + +G+ + + ++ +E + +V G+ +E+A ++ +I
Sbjct: 627 ISVLEACASLRALVEGKAIHERIVAS-GVETDVFVGTAVVSFYGKCEAVEDARQVFDRI 684
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 164/576 (28%), Positives = 277/576 (48%), Gaps = 70/576 (12%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
M+L GV D +T A+S C L G Q+H+ I+ GL + V + N+L+ MY + G
Sbjct: 1 MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
+ EAR FD MP +D +SWNA+++ Y Q + G +AI +G + D V+F S +
Sbjct: 61 VEEARNAFDRMPERDLISWNAMITVYAQH-ECGKQAIQLYAYSRLEGTKPDEVTFASLLN 119
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
AC +L+ G+ +H + + + V N L+S YS C DA VF +V +
Sbjct: 120 ACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCT 179
Query: 228 WTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
WTT+I+ E A + + +M +G+ N++TF+ ++ S +++ G+ +H L +
Sbjct: 180 WTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLAL 239
Query: 283 KTNFLSEPSVCNCLITMYARFESMQD-SEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
+ + N LI+MY + D + +VF +S +ISW+A I+ Y Q+ A+
Sbjct: 240 GSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQH---WEAI 296
Query: 342 QAF-FGVIKESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
+ F ++ KPNA T SVL A VGA E G+R H+ ++ + V +A
Sbjct: 297 KTFELMNLEGVKPNATTLTSVLRACATVGAHE-----QGRRIHALVLAGPYTQNTTVLNA 351
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
+Y K + ++ RVF+ K +W AI+SA A+ G + + ++M+ +G PD
Sbjct: 352 AASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPD 411
Query: 458 SITFLSVLTVCGRNGMIHK---------GRHLFDSMLKDYHIEPSPDHY--SCMVDMLGR 506
ITF+++L C ++ ++ + GR + M+ + D Y + +V M GR
Sbjct: 412 DITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISN---GLDGDTYLGNLLVQMYGR 468
Query: 507 VGRLEEAEE-------------------LVGQIPGGPGLSVLQ---------------SL 532
G L++A LV GL +L+ SL
Sbjct: 469 CGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISL 528
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSN 568
LGAC + G++ +G+ I + ++ G S ++ SN
Sbjct: 529 LGACSVTGDLSLGKTIHE---RIRTKGLESDIITSN 561
>gi|255583011|ref|XP_002532274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528034|gb|EEF30114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 631
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 192/608 (31%), Positives = 318/608 (52%), Gaps = 69/608 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+++Y K G D+A +F+ L V+W T+++ K S+ +L +M VV D
Sbjct: 83 VDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVKRGRSEVSLQLFSQMRETNVVPDG 142
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+ L C E G Q+H +++ G++ +V N LI Y++ G++ AR++FD
Sbjct: 143 YILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSFVNVLIDFYTKSGKVQSARKLFDG 202
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +++ +SW A+++GY Q+ + EA+ IEM R G R D TS ++CG + LEL
Sbjct: 203 MADRNVISWTAMIAGYMQN-SFDREAVKLFIEMTRLGRRPDGFVCTSILTSCGSLEALEL 261
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+Q+H SIK + + + N L+ Y+KC DA KVF M RNV+S+ +I
Sbjct: 262 GRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARKVFDDMTIRNVVSYNALIEGYST 321
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A++LF+EMR + P+ +TF+ L+ A + + ++ G+ IH L K E
Sbjct: 322 LEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSALELGKQIHALITKFGISMEIFA 381
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
+ LI Y++ + D+ VFD+++ ++I+ WNA++ GY Q + A++ + + I E
Sbjct: 382 GSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFGYTQQLENEEALKLYTELQISEP 441
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KPN TF ++ A A+ SL+HGQ+ H+HIIK GLDS P ++L+DMY K GS+ ++
Sbjct: 442 KPNVVTFAALTTA--ASNLASLQHGQQFHNHIIKTGLDSHPFTTNSLIDMYAKCGSLEDA 499
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
++ F ++ ++ F+ M ++P + + V+++ GR+
Sbjct: 500 RKAFGHVKDG---------------------LHYFESMPKFSIKPGTEHYACVVSLLGRS 538
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G +L EA+E + ++P P V +S
Sbjct: 539 G------------------------------------KLYEAKEFIEKMPTEPEAVVWRS 562
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL ACR+ GNVE+G+ A+ + ++ SGSY L+SN+YA KG W V +R+ M GV
Sbjct: 563 LLSACRVSGNVELGKYAAEKAISIDSTDSGSYTLLSNIYASKGMWVDVKKVRERMDIAGV 622
Query: 592 RKEVGFSW 599
KE G SW
Sbjct: 623 VKEAGHSW 630
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 209/403 (51%), Gaps = 12/403 (2%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
MP ++ +SW++++S Y++ G + EA+L ++ R + S SAC
Sbjct: 1 MPERNLISWSSVVSMYSKRG-FSEEALLVFLDFKRCCNENPNEYILASVISACVQVGG-S 58
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
+ KQ+HG ++K G+ +V VG L+ Y+K +A VF + +++ ++WTT+I+
Sbjct: 59 IDKQMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACV 118
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E ++ LF +MR V P+ ++ A S V+ G+ IHG ++ + S
Sbjct: 119 KRGRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVS 178
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
N LI Y + +Q + K+FD ++ R +ISW A+I+GY QN AV+ F + +
Sbjct: 179 FVNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLG 238
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ + S+L + G+ E + L G++ H++ IK ++SD + + L+DMY K GS+ +
Sbjct: 239 RRPDGFVCTSILTSCGSLEALEL--GRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLND 296
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+++VF++ ++ ++ A+I + MN F+EM + + P +TF+S+L
Sbjct: 297 ARKVFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASAT 356
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ G+ + +++ + I S ++D + L +A
Sbjct: 357 LSALELGKQI-HALITKFGISMEIFAGSALIDFYSKCSCLMDA 398
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 156/306 (50%), Gaps = 15/306 (4%)
Query: 220 MHDRNVISWTTMISMNR-----EDAVSLFKEM-RLDGVCPNDVTFIGLIHA-ISIGNLVK 272
M +RN+ISW++++SM E+A+ +F + R PN+ +I A + +G +
Sbjct: 1 MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGGSID 60
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
+ +HG +K+ F V L+ +YA+ ++ ++ VFD L + ++W +I+
Sbjct: 61 --KQMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACV 118
Query: 333 QNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
+ G S ++Q F ++E+ P+ Y SVL A E + + G++ H H+++ G++
Sbjct: 119 KRGRSEVSLQ-LFSQMRETNVVPDGYILSSVLGACSQLEFV--QGGKQIHGHVLRRGIEI 175
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D + L+D Y K G + ++++F+ +++ +WTA+I+ ++ + F EM
Sbjct: 176 DVSFVNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMT 235
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
G RPD S+LT CG + GR + +K ++E + ++DM + G L
Sbjct: 236 RLGRRPDGFVCTSILTSCGSLEALELGRQVHAYSIKG-NVESDIFLQNGLIDMYAKCGSL 294
Query: 511 EEAEEL 516
+A ++
Sbjct: 295 NDARKV 300
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/469 (36%), Positives = 277/469 (59%), Gaps = 11/469 (2%)
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
+ +A +AC + L G+Q+H I Y V +G L++ Y +C DA V RM
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 222 DRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
+R+V+SWTTMIS + +A+ LF +M G PN+ T ++ + S + +G+
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
+H L +KTNF S V + L+ MYA+ E++Q++ +VFD L R+++S A+ISGYAQ GL
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 337 SLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A+ F + E + N TF +++ A+ SL +G++ H+ I++ L +
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLA--SLDYGKQVHALILRKELPFFVALQ 250
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
++L+DMY K G + S+RVF+ E+S +W A++ RHG V++ FK++ +K V+
Sbjct: 251 NSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVK 309
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
PDS+T L+VL+ C G++ +G +FD+++K+ HY C++D+LGR GRLE+A
Sbjct: 310 PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALN 369
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
L+ +P S+ SLLGACR+H NV +GE +A L++MEP +G+YV++SN+YA G
Sbjct: 370 LIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGM 429
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
W+ V +RK M K V KE G SW + + +H F S + HP ++I
Sbjct: 430 WKDVFKVRKLMLEKTVTKEPGQSWIILDKV--IHTFHSSERFHPSKKDI 476
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 213/412 (51%), Gaps = 35/412 (8%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y A++ C++ G Q+H+ ++ V++G L+TMY R G L +AR V D MP
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ VSW ++SGY+Q + VEA+ I+M+R G + + + ++C +++ GK
Sbjct: 73 ERSVVSWTTMISGYSQTERH-VEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGK 131
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR--- 236
Q+H + +K + +H+ VG+ L+ Y+K E +A +VF + +R+V+S T +IS
Sbjct: 132 QVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKG 191
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
E+A+ LF+++ +G+ N VTF L+ A+S + G+ +H L ++ ++ N
Sbjct: 192 LDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN 251
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPN 354
LI MY++ + S +VFD + R ++SWNA++ GY ++GL + F + KE KP+
Sbjct: 252 SLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEVKPD 311
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS-DPIVG--SALL---------DMY 402
+ T +VL+ H ++ GLD D +V SALL D+
Sbjct: 312 SVTLLAVLSGCS-------------HGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLL 358
Query: 403 GKRGSIFESQRVF-NETQEKSEFAWTAIISALARHGDY---ESVMNQFKEME 450
G+ G + ++ + N E + W +++ A H + E V + EME
Sbjct: 359 GRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEME 410
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 197/384 (51%), Gaps = 15/384 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY + G D A + + + +VSW T++SG+ +++ +AL ++M G + +
Sbjct: 52 VTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNE 111
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +T L+ C + G Q+HSL+VK +S ++VG++L+ MY++ + EARRVFD
Sbjct: 112 YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDT 171
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P +D VS AI+SGY Q G EA+ ++ +G++ +HV+FT+ +A +L+
Sbjct: 172 LPERDVVSCTAIISGYAQKG-LDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDY 230
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNR 236
GKQ+H + ++ V++ N L+ YSKC + +VF M +R+V+SW M+ R
Sbjct: 231 GKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGR 290
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK-TNFLSEPS 291
+ +SLFK++ + V P+ VT + ++ S G LV EG I +K + L
Sbjct: 291 HGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTG 349
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG---YAQNGLSLAAVQAFFGV 347
C+I + R ++ + + + + S W +L+ +A + Q +
Sbjct: 350 HYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEM 409
Query: 348 IKESKPNAYTFGSVLNAVGAAEDI 371
E+ N ++ A G +D+
Sbjct: 410 EPENAGNYVILSNIYAAAGMWKDV 433
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/479 (37%), Positives = 278/479 (58%), Gaps = 21/479 (4%)
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
ACG +L GK+IH + +K+G+ V V L+ YS+ + GDA K+F M R+ S
Sbjct: 6 ACG---DLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGS 62
Query: 228 WTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
W MIS N +A+ + EMRL+GV + +T ++ + + G++IH I
Sbjct: 63 WNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVI 122
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K E V N LI MYA+F S+ ++KVF L ++++SWN LI+GYAQNGL+ A++
Sbjct: 123 KHGLEFELFVSNALINMYAKFGSLGHAQKVFG-LLIKDVVSWNTLITGYAQNGLASEAIE 181
Query: 343 AFFGVIKESK--PNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
+ + + + PN T+ S+L A VGA L+ G R H +IK L SD VG+
Sbjct: 182 VYLLMEEHEEIIPNQGTWVSILPAYSHVGA-----LQQGMRIHGQVIKNCLYSDVFVGTC 236
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L+DMYGK G + ++ +F + K+ W A+IS HGD E + F+EM+ + V+PD
Sbjct: 237 LIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPD 296
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
ITF+S+L+ C +G++ + F+ M ++Y I+PS HY CMVD+ GR G LE A +
Sbjct: 297 HITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFI 356
Query: 518 GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
++P P S +LL ACRIHGN+E+G+ ++ L +++ G YVL+SN+YA G WE
Sbjct: 357 KKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWE 416
Query: 578 MVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V +R + +G+RK G W+ + + + F +G+ THP+ EEIYR L S++K
Sbjct: 417 GVDDVRSLARDRGLRKNPG--WSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIK 473
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 204/380 (53%), Gaps = 19/380 (5%)
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
L G ++H L++K G + +V+V +L+ MYSR+G + +AR++FD+MP +D SWNA++SG
Sbjct: 10 LLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISG 69
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Y Q+G+ EA+ EM +G+++D ++ S C ++ GK IH IK G
Sbjct: 70 YCQNGN-AAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEF 128
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEM- 246
+ V N L++ Y+K G A KVF + ++V+SW T+I+ + +A+ ++ M
Sbjct: 129 ELFVSNALINMYAKFGSLGHAQKVFGLL-IKDVVSWNTLITGYAQNGLASEAIEVYLLME 187
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+ + PN T++ ++ A S +++G IHG IK S+ V CLI MY + +
Sbjct: 188 EHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKL 247
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV 365
D+ +F ++ + + WNA+IS Y +G A++ F + E KP+ TF S+L+A
Sbjct: 248 DDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSAC 307
Query: 366 GAAEDISLKHGQRCHSHI-IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ----E 420
+ +S Q C + + + G+ ++D++G+ G E + FN + +
Sbjct: 308 SHSGLVS--DAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAG---ELEMAFNFIKKMPIQ 362
Query: 421 KSEFAWTAIISALARHGDYE 440
AW A+++A HG+ E
Sbjct: 363 PDASAWGALLNACRIHGNIE 382
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 197/386 (51%), Gaps = 18/386 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY + G A +F+++ D SWN ++SG+ + + +AL A M L GV DA
Sbjct: 36 VHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDA 95
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T ++ L C L G +H ++K GL+ E++V NALI MY+++G L A++VF
Sbjct: 96 ITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGL 155
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAI-LALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ KD VSWN +++GY Q+G EAI + L+ + + + ++ S A H L+
Sbjct: 156 LI-KDVVSWNTLITGYAQNG-LASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQ 213
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G +IHG IK + V VG L+ Y KC DA +F ++ +N + W MIS
Sbjct: 214 QGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYG 273
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E A+ LF+EM+ + V P+ +TF+ L+ A S LV + + + ++ + +PS
Sbjct: 274 VHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNM-MEEEYGIKPS 332
Query: 292 VCN--CLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNG---LSLAAVQAFF 345
+ + C++ ++ R ++ + ++ + S W AL++ +G L A + F
Sbjct: 333 LKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLF 392
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDI 371
V E+ ++ VG E +
Sbjct: 393 EVDSENVGYYVLLSNIYANVGKWEGV 418
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 122/315 (38%), Gaps = 64/315 (20%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K G+ D A+ +F + + V WN ++S + D AL M V D
Sbjct: 238 IDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDH 297
Query: 58 VTYSTALSFCLDHEGFLFGLQ--LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T+ + LS C H G + Q + + ++G+ + ++ ++ R G L A
Sbjct: 298 ITFVSLLSAC-SHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFI 356
Query: 116 DEMP-NKDSVSWNAILSG----------------------------------YTQDGDY- 139
+MP D+ +W A+L+ Y G +
Sbjct: 357 KKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWE 416
Query: 140 GVEAILALIEMMRKGLRLD------------HVSFTSAASACGHEKNLELGKQIHGVSIK 187
GV+ + +L +GLR + V +T + H K E+ +++ ++ K
Sbjct: 417 GVDDVRSLAR--DRGLRKNPGWSSIILNNKVDVFYTGNQT---HPKCEEIYRELRDLTSK 471
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEMR 247
+ ++G V + +V D + H + +IS + + + +FK +R
Sbjct: 472 IK-----TIGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLR 526
Query: 248 LDGVCPNDVTFIGLI 262
+ G C FI +I
Sbjct: 527 VCGDCHTVTKFISII 541
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 200/645 (31%), Positives = 340/645 (52%), Gaps = 28/645 (4%)
Query: 1 MNMYCKSGQ--FDKALCIFNNLNN--PDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFD 56
+ YC + A +F ++ D+ SWN++L+ + + + +++ D
Sbjct: 56 ITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSLLNPLSRHQPLAALSHFRSMMSST-D 114
Query: 57 AV-----TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDS---EVYVGNALITMYSRWGRL 108
AV +++ + G H+ K S V+V AL+ MY + G +
Sbjct: 115 AVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAI 174
Query: 109 VEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA-- 166
+ARRVFD+MP++++VSW A++SGY G EA L +M + L+ F + A
Sbjct: 175 SDARRVFDQMPHRNAVSWAAMVSGYAT-GKCSEEA-FELFRLMLQECPLEKNEFVATAVL 232
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
SA L +G Q+HG+ +K G VSV N L++ Y+K E A VF +RN I
Sbjct: 233 SAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSI 292
Query: 227 SWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+W+ MI+ ++ A ++F +M G P + TF+G+++A S + G+ HGL
Sbjct: 293 TWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLM 352
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSLAA 340
+K F + V + L+ MYA+ D++ F +L +++ W A+I+G+ QNG A
Sbjct: 353 VKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEA 412
Query: 341 VQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
+ + + KE P+ T SVL A +L+ G++ H+ I+K G VG+AL
Sbjct: 413 LMLYSRMDKEGVMPSYLTVTSVLRACACLA--ALEPGKQLHAQILKCGFGLGGSVGTALS 470
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
MY K G++ +S VF ++ +W +IIS ++HG ++ F+EM+ +G+ PD I
Sbjct: 471 TMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHI 530
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
TF++VL C G++ +G F +M KDY + P DHY+C+VD+L R G+L+EA++ +
Sbjct: 531 TFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIES 590
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
I G + + +LGACR + ++G + LM++ S +Y+L+SN+YA + W V
Sbjct: 591 ITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDV 650
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
+R M+ +GV K+ G SW ++ + ++ F G+ HP +E+I
Sbjct: 651 ERVRHLMRLRGVSKDPGCSWVELN--NQVNVFVVGEQQHPEAEKI 693
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 210/431 (48%), Gaps = 27/431 (6%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGR--LVEARRVFDEMPN--KDSVSWNAILS 131
G LH +K G S V N+LIT Y R L A VF ++P +D SWN++L+
Sbjct: 33 GDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSLLN 92
Query: 132 GYTQDGDYGVEAILALIEMMRKG---LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
++ + A+ MM L H SF + +A + G H + K+
Sbjct: 93 PLSRHQP--LAALSHFRSMMSSTDAVLPTPH-SFAAVFTAAARVPSASAGAVAHAFACKL 149
Query: 189 GYGT---HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAV 240
+ +V V L++ Y K DA +VF +M RN +SW M+S E+A
Sbjct: 150 PSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAF 209
Query: 241 SLFKEMRLDGVCP---NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
LF+ M + CP N+ ++ A+S+ + G +HGL +K + SV N L+
Sbjct: 210 ELFRLMLQE--CPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLV 267
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
TMYA+ E M + VF R I+W+A+I+GYAQNG + A F + P +
Sbjct: 268 TMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEF 327
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
TF +LNA +++ +L G++ H ++K+G + V SAL+DMY K G +++ F+
Sbjct: 328 TFVGILNA--SSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFH 385
Query: 417 ETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ + + WTA+I+ ++G++E + + M+ +GV P +T SVL C +
Sbjct: 386 QLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALE 445
Query: 476 KGRHLFDSMLK 486
G+ L +LK
Sbjct: 446 PGKQLHAQILK 456
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES--MQDSEKVFDELSC--REIISWNAL 327
+ G +HG +K+ S V N LIT Y + + VF ++ R++ SWN+L
Sbjct: 31 RAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSL 90
Query: 328 ISGYAQNGLSLAAVQAFFGVIKESK---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHII 384
++ +++ LAA+ F ++ + P ++F +V A AA S G H+
Sbjct: 91 LNPLSRHQ-PLAALSHFRSMMSSTDAVLPTPHSFAAVFTA--AARVPSASAGAVAHAFAC 147
Query: 385 KVGLDS---DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
K+ S + V +ALL+MY K G+I +++RVF++ ++ +W A++S A E
Sbjct: 148 KLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEE 207
Query: 442 VMNQFKEM 449
F+ M
Sbjct: 208 AFELFRLM 215
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 196/626 (31%), Positives = 331/626 (52%), Gaps = 48/626 (7%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD------- 116
L C+ H G LH+L +K + + Y+ N + +YS+ RL ARRVFD
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74
Query: 117 ------------------------EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR 152
EMP DSVS+N +++ Y + GD A +EM
Sbjct: 75 FSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQ-PAFQLFLEMRE 133
Query: 153 KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD 212
L +D + + +ACG N+ L +Q+H +S+ G ++VSVGN L+++YSK +
Sbjct: 134 AFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKE 191
Query: 213 ANKVFRRM-HDRNVISWTTMIS---MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
A ++F + DR+ +SW +M+ +RE A+ L+ EM + G+ + T ++ A +
Sbjct: 192 ARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFT 251
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE-SMQDSEKVFDELSCREIISWN 325
+ G H IK+ + V + LI +Y++ M D KVFDE+S +++ WN
Sbjct: 252 NVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWN 311
Query: 326 ALISGYA-QNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
+ISGY+ LS A++ F + + +P+ + V++A S G++ H
Sbjct: 312 TMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPS--QGRQVHGLA 369
Query: 384 IKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
+K+ + S+ I V +AL+ MY K G++ +++ +F+ E + ++ ++I+ A+HG
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
++ F+ M G P +ITF+SVL C G + G+ F+ M + + IEP H+SCM+D
Sbjct: 430 LHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMID 489
Query: 503 MLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGS 562
+LGR G+L EAE L+ IP PG +LLGACRIHGNVE+ + A+ L++++P +
Sbjct: 490 LLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAP 549
Query: 563 YVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSE 622
YV+++N+Y++ G + A +RK M+ +GV+K+ G SW +V +H F + D HP +
Sbjct: 550 YVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVN--RRIHIFVAEDTFHPMIK 607
Query: 623 EIYRMAECLGSEMKYLNSKRERAIAL 648
+I E + ++K + E AL
Sbjct: 608 KIQEYLEEMMRKIKKVGYTPEVRSAL 633
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 147/461 (31%), Positives = 247/461 (53%), Gaps = 32/461 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++ Y K + A +F+ + PD VS+NT+++ + + D A L M + D
Sbjct: 81 ISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDG 140
Query: 58 VTYSTALSFCLDHEGFLFGL--QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T S ++ C G GL QLH+L V GLDS V VGNALIT YS+ G L EARR+F
Sbjct: 141 FTLSGIITAC----GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIF 196
Query: 116 DEMP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
+ ++D VSWN+++ Y Q + G +A+ +EM +GL +D + S +A + ++
Sbjct: 197 HWLSEDRDEVSWNSMVVAYMQHRE-GSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQD 255
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC-EVTGDANKVFRRMHDRNVISWTTMIS 233
L G Q H IK GY + VG+ L+ YSKC D KVF + + +++ W TMIS
Sbjct: 256 LLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMIS 315
Query: 234 MN------REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
++A+ F+++++ G P+D + + +I A S + +GR +HGL +K +
Sbjct: 316 GYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIP 375
Query: 288 SEP-SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S SV N LI MY++ +++D++ +FD + +S+N++I+GYAQ+G+ ++ F
Sbjct: 376 SNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQR 435
Query: 347 VIKES-KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLD 400
+++ P TF SVL A G ED + + +++K +P G S ++D
Sbjct: 436 MLEMGFTPTNITFISVLAACAHTGRVED------GKIYFNMMKQKFGIEPEAGHFSCMID 489
Query: 401 MYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ G+ G + E++R+ + F W+A++ A HG+ E
Sbjct: 490 LLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVE 530
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 179/401 (44%), Gaps = 44/401 (10%)
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+F C ++L GK +H + IK T + N + YSKC A +VF
Sbjct: 10 NFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 221 HDRNVISWTTMIS-----------------MNREDAVS-------------------LFK 244
HD NV S+ T+IS M + D+VS LF
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
EMR + + T G+I A I V R +H L + T S SV N LIT Y++
Sbjct: 130 EMREAFLDMDGFTLSGIITACGIN--VGLIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187
Query: 305 SMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVL 362
++++ ++F LS R+ +SWN+++ Y Q+ A++ + + ++ + +T SVL
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK-RGSIFESQRVFNETQEK 421
A +D L G + H+ +IK G + VGS L+D+Y K G + + ++VF+E
Sbjct: 248 TAFTNVQD--LLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305
Query: 422 SEFAWTAIISALARHGDY-ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
W +IS + + D + + F++++ G RPD + + V++ C +GR +
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV 365
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
LK + ++ M + G L +A+ L +P
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP 406
>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Vitis vinifera]
Length = 700
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 202/624 (32%), Positives = 331/624 (53%), Gaps = 32/624 (5%)
Query: 22 NPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQ 78
P + SWN ++SG ++ +DAL RM + +T ++ L C + G
Sbjct: 7 QPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKA 66
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H++ +K G+ VYV ++I MYS+ G A +VF + NK++ WN +++ Y +G
Sbjct: 67 IHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGK 126
Query: 139 YGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVS--IKMGYGTHVS 195
VE L L+ M+K G + D +++ + S GH +N + +S ++MG +V
Sbjct: 127 --VEDALGLLRSMQKDGWKPDVITYNTILS--GHARNGLKTQAFELLSEMVQMGLKPNVV 182
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEMRLDGVCPND 255
NVL+S + + ++ +A KVFR M + N + ++L MR PN
Sbjct: 183 SFNVLISGFQQSGLSYEALKVFRIMQ-------SPSDGCNPNEVLNL--SMR-----PNP 228
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
+T G + A + NL +G+ IHG ++ F V + L+ MYA+ M + KVF
Sbjct: 229 ITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFR 288
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS-L 373
+ R +SWNAL++GY N A++ F ++ E +P++ TF + A G DI+ +
Sbjct: 289 IDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACG---DIAAI 345
Query: 374 KHGQRCHSHIIKVGLDS-DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
+ G+ H + K LD + SAL+DMY K GSI +++ VF+ EK W A+ISA
Sbjct: 346 RFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISA 405
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
+ HG + F +ME G+ PD ITF+S+L+ C R+G++ +G F+SM Y +
Sbjct: 406 FSVHGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAA 465
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
+ +HY+CMV +LG G L+EA + + Q+P P + +LL ACR+H N E+GER A AL
Sbjct: 466 TLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKAL 525
Query: 553 MKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFS 612
++EP + +Y+L+SN+Y G W+ LR M+ + + S+ VG + F
Sbjct: 526 FELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVG--SHICTFK 583
Query: 613 SGDNTHPRSEEIYRMAECLGSEMK 636
G+++HP EEI + L +M+
Sbjct: 584 GGESSHPELEEILEAWDKLARKME 607
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 183/381 (48%), Gaps = 40/381 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K G +D A +F N + WN +++ + K +DAL M G D
Sbjct: 87 IDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDV 146
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+TY+T LS + +L S +V+ GL V N LI+ + + G EA +VF
Sbjct: 147 ITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRI 206
Query: 118 MPNK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M + D + N E++ +R + ++ T A AC
Sbjct: 207 MQSPSDGCNPN---------------------EVLNLSMRPNPITITGALPACADLNLWC 245
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GK+IHG +++ G+ ++ V + L+ Y+KC ANKVF R+ RN +SW +++
Sbjct: 246 QGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYI 305
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS-EP 290
E+A+ LF EM +G+ P+ +TF+ L A ++ GR +HG K +
Sbjct: 306 YNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKN 365
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----F 345
++ + LI MYA+ S+ D++ VFD +++ WNA+IS ++ +G++ A F
Sbjct: 366 AIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQMELL 425
Query: 346 GVIKESKPNAYTFGSVLNAVG 366
G++ P+ TF S+L+A
Sbjct: 426 GIL----PDHITFVSLLSACA 442
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K D A +F ++ + VSWN +++G+ ++ ++AL L M G+ +
Sbjct: 270 VDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSS 329
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDS-EVYVGNALITMYSRWGRLVEARRVFD 116
+T+ C D FG LH K LD + + +ALI MY++ G +++A+ VFD
Sbjct: 330 ITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFD 389
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
KD WNA++S ++ G A ++M G+ DH++F S SAC + +E
Sbjct: 390 SEVEKDVPLWNAMISAFSVHG-MARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVE 448
Query: 177 LG-KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMISM 234
G K + + I G + ++ + +A R+M + + W T++
Sbjct: 449 EGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQA 508
Query: 235 NR 236
R
Sbjct: 509 CR 510
>gi|224106537|ref|XP_002314200.1| predicted protein [Populus trichocarpa]
gi|222850608|gb|EEE88155.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/612 (31%), Positives = 323/612 (52%), Gaps = 16/612 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++ Y K G A +F +L D+ WN ++ G+ + +A+ A M G+ D
Sbjct: 197 LSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRRKGIFMDK 256
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + C F FG Q+H LI++ L+ V NAL+ MY + G + VF +
Sbjct: 257 YTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDMYFKNGGMKSGLVVFKK 316
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIE-MMRKGLRLDHVSFTSAASACGHEKNLE 176
M ++D V+WN + ++Q D + I +L + +R +H++F+ CG NL+
Sbjct: 317 MHDRDVVTWNTVFGSFSQHED--PKDIASLFHSFLLTSMRPNHITFSILFRECGKLLNLD 374
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
LG Q +++ G ++ + L++ +S+C A+ VF+ N+I W +IS
Sbjct: 375 LGLQFCCLALHFGLFDEANITSALINMFSRCGKMEMAHLVFKSKVSENIIIWNELISGYK 434
Query: 234 MNREDAVSL--FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+N DA +L F ++ GV N+ TF ++ S R IHG+ K+ F S
Sbjct: 435 LNCCDAEALKTFYDLLQLGVEANEYTFSNVLETCSRSENQLMNRQIHGVAFKSGFASHGY 494
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE- 350
VC+ LI Y + + DS KVF+ L ++ +W +IS + G A+++ +I+
Sbjct: 495 VCSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAWGTMISAFVHQGWDCEAIRSLNLLIEAG 554
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP+ + GS+L++ A ++ + HS IIK+G + V SA+LD Y K G I
Sbjct: 555 EKPDEFILGSILSS--CASTVAYCQTKSVHSLIIKLGFEGHVFVASAVLDAYAKCGDIQS 612
Query: 411 SQRVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
++ FN++ + S+ + A+I A A HG ++ + +M+ ++P TF+SV+ CG
Sbjct: 613 AKMAFNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPSQATFVSVIAACG 672
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G + KG LF SM Y +EPSPD Y C+VDM R G LE+A++++ +P ++L
Sbjct: 673 HIGHVEKGCRLFKSM-DLYGMEPSPDIYGCLVDMFSRNGYLEDAKQIIESLPYPAWPAIL 731
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
+SLL CR++GN E+GE A L+++ P ++ L+ +Y+E G+WE A +R+ M +
Sbjct: 732 RSLLSGCRMYGNRELGEWAAKKLLQLVPHNDAAHALLFKVYSELGNWEDAAKMRREMAER 791
Query: 590 GVRKEVGFSWAD 601
G+RK+ G SW +
Sbjct: 792 GLRKDPGHSWIE 803
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 220/488 (45%), Gaps = 38/488 (7%)
Query: 9 QFDKALCIFNNLNNPDI------VSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYST 62
QF K + FNN+ ++ +S + SGF IG D+V S
Sbjct: 15 QFSKKVYKFNNIQLKNLHQLYSPISTKSSCSGF--------------FIGK--DSVALSK 58
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
ALSFC + + F+ G Q+H I+K G S+V+V N LI Y++ L VFD M ++
Sbjct: 59 ALSFCENSKSFILGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERN 118
Query: 123 SVSWNAILSGYTQ--DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE-KNLELGK 179
VSW ++ G Q + + G+E L EM+R G + S ACG+ + G
Sbjct: 119 VVSWTLMVCGAIQCEEVELGLEVFL---EMIRDGFVPNEFGLGSVMKACGNSVEGRVFGL 175
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
+H ++K+G + V ++S Y+K G A +VF + + +V W MI +
Sbjct: 176 CVHCFALKIGMERNPFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCG 235
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+ MR G+ + TFI +I S+ GR IHGL I++ V N
Sbjct: 236 YGFEAIVTASLMRRKGIFMDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMN 295
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
L+ MY + M+ VF ++ R++++WN + ++Q+ F + S +P
Sbjct: 296 ALMDMYFKNGGMKSGLVVFKKMHDRDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRP 355
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N TF + G ++ L C + + GL + + SAL++M+ + G + +
Sbjct: 356 NHITFSILFRECGKLLNLDLGLQFCCLA--LHFGLFDEANITSALINMFSRCGKMEMAHL 413
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR--N 471
VF ++ W +IS + + F ++ GV + TF +VL C R N
Sbjct: 414 VFKSKVSENIIIWNELISGYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLETCSRSEN 473
Query: 472 GMIHKGRH 479
++++ H
Sbjct: 474 QLMNRQIH 481
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/579 (31%), Positives = 299/579 (51%), Gaps = 63/579 (10%)
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTS 164
GRL +A +FD MP K+ V+W +++SG T++G EA LA+ +M+ G+ + + +
Sbjct: 62 GRLADALDLFDRMPRKNVVAWTSVMSGCTRNGR--PEAALAMFADMVESGVAPNDFACNA 119
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
A AC L G+Q+H ++++ G+ +G+ L+ YS+C A +VF RM +
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPD 179
Query: 225 VISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISI-------GNLVK 272
V+ +T++IS E A +M G+ PN+ T ++ A G L+K
Sbjct: 180 VVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIK 239
Query: 273 E-------------------------------------------GRMIHGLCIKTNFLSE 289
+ GR +H IK + +++
Sbjct: 240 KIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITD 299
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V N L++MY R +++ E + +++ +++SW IS QNG A+ +
Sbjct: 300 IRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHS 359
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E PN Y F SVL++ A+ SL G + H +K+G DS+ G+AL++MY K G +
Sbjct: 360 EGFTPNGYAFSSVLSSC--ADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 417
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ F+ +W ++I A+HGD + F +M + G++PD TFL VL C
Sbjct: 418 GSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGC 477
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+GM+ +G F M+ Y P+P HY+CM+DMLGR GR +EA ++ +P P +
Sbjct: 478 NHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALI 537
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
++LL +C++H N+++G+ AD LM++ S SYVLMSN+YA G+WE +R+ M
Sbjct: 538 WKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDE 597
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
GV+K+ G SW ++ + +H F+S D +HP S+ IY+M
Sbjct: 598 TGVKKDAGCSWIEIN--NEVHTFASRDMSHPNSDSIYQM 634
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 231/497 (46%), Gaps = 64/497 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N KSG+ AL +F+ + ++V+W +V+SG ++ + AL+ M GV +
Sbjct: 55 LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPND 114
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ AL C D G Q+HSL V+ G + ++G+ LI MYSR G L A+ VFD
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC-------- 169
M + D V + +++S + ++G++ + A ALI+M+++GL+ + + T+ +AC
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAA-EALIQMLKQGLKPNEHTMTTILTACPRVLGQQI 233
Query: 170 ------------------------------------------GHEKNLELGKQIHGVSIK 187
G ++ LG+Q+H +IK
Sbjct: 234 HGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIK 293
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSL 242
T + V N L+S Y + + + + ++ + +++SWTT IS N E A++L
Sbjct: 294 HDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIAL 353
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
+M +G PN F ++ + + + +G H L +K SE N LI MY++
Sbjct: 354 LCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSK 413
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSV 361
M + FD + ++ SWN+LI G+AQ+G + A++ F + KP+ TF V
Sbjct: 414 CGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGV 473
Query: 362 LNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ- 419
L +G ++ G+ +I + P + ++DM G+ G E+ R+ N+
Sbjct: 474 L--MGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPF 531
Query: 420 EKSEFAWTAIISALARH 436
E W ++++ H
Sbjct: 532 EPDALIWKTLLASCKLH 548
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 11/172 (6%)
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D ++ L+ K G + ++ +F+ K+ AWT+++S R+G E+ + F +M
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMV 106
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVG 508
GV P+ + L C G + G + ++ + D + SC+++M R G
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGF---AGDAWIGSCLIEMYSRCG 163
Query: 509 RLEEAEELVGQIPGGPGLSVLQSLLGA-CRIHGNVEMGERIADALMKMEPAG 559
L A+E+ ++ P + SL+ A CR +G E+ A+AL++M G
Sbjct: 164 SLPAAKEVFDRM-DSPDVVGYTSLISAFCR-NGEFELA---AEALIQMLKQG 210
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/469 (36%), Positives = 277/469 (59%), Gaps = 11/469 (2%)
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
+ +A +AC + L G+Q+H I Y V +G L++ Y +C DA V RM
Sbjct: 45 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104
Query: 222 DRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
+R+V+SWTTMIS + +A+ LF +M G PN+ T ++ + S + +G+
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
+H L +KTNF S V + L+ MYA+ E++Q++ +VFD L R+++S A+ISGYAQ GL
Sbjct: 165 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 224
Query: 337 SLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A+ F + E + N TF +++ A+ SL +G++ H+ I++ L +
Sbjct: 225 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLA--SLDYGKQVHALILRKELPFFVALQ 282
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
++L+DMY K G + S+RVF+ E+S +W A++ RHG V++ FK++ +K V+
Sbjct: 283 NSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVK 341
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
PDS+T L+VL+ C G++ +G +FD+++K+ HY C++D+LGR GRLE+A
Sbjct: 342 PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALN 401
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
L+ +P S+ SLLGACR+H NV +GE +A L++MEP +G+YV++SN+YA G
Sbjct: 402 LIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGM 461
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
W+ V +RK M K V KE G SW + + +H F S + HP ++I
Sbjct: 462 WKDVFKVRKLMLEKTVTKEPGQSWIILDKV--IHTFHSSERFHPSKKDI 508
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 213/412 (51%), Gaps = 35/412 (8%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y A++ C++ G Q+H+ ++ V++G L+TMY R G L +AR V D MP
Sbjct: 45 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+ VSW ++SGY+Q + VEA+ I+M+R G + + + ++C +++ GK
Sbjct: 105 ERSVVSWTTMISGYSQTERH-VEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGK 163
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR--- 236
Q+H + +K + +H+ VG+ L+ Y+K E +A +VF + +R+V+S T +IS
Sbjct: 164 QVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKG 223
Query: 237 --EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
E+A+ LF+++ +G+ N VTF L+ A+S + G+ +H L ++ ++ N
Sbjct: 224 LDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQN 283
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPN 354
LI MY++ + S +VFD + R ++SWNA++ GY ++GL + F + KE KP+
Sbjct: 284 SLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEVKPD 343
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS-DPIVG--SALL---------DMY 402
+ T +VL+ H ++ GLD D +V SALL D+
Sbjct: 344 SVTLLAVLSGCS-------------HGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLL 390
Query: 403 GKRGSIFESQRVF-NETQEKSEFAWTAIISALARHGDY---ESVMNQFKEME 450
G+ G + ++ + N E + W +++ A H + E V + EME
Sbjct: 391 GRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEME 442
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 197/384 (51%), Gaps = 15/384 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY + G D A + + + +VSW T++SG+ +++ +AL ++M G + +
Sbjct: 84 VTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNE 143
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +T L+ C + G Q+HSL+VK +S ++VG++L+ MY++ + EARRVFD
Sbjct: 144 YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDT 203
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P +D VS AI+SGY Q G EA+ ++ +G++ +HV+FT+ +A +L+
Sbjct: 204 LPERDVVSCTAIISGYAQKG-LDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDY 262
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SMNR 236
GKQ+H + ++ V++ N L+ YSKC + +VF M +R+V+SW M+ R
Sbjct: 263 GKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGR 322
Query: 237 ----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK-TNFLSEPS 291
+ +SLFK++ + V P+ VT + ++ S G LV EG I +K + L
Sbjct: 323 HGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTG 381
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG---YAQNGLSLAAVQAFFGV 347
C+I + R ++ + + + + S W +L+ +A + Q +
Sbjct: 382 HYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEM 441
Query: 348 IKESKPNAYTFGSVLNAVGAAEDI 371
E+ N ++ A G +D+
Sbjct: 442 EPENAGNYVILSNIYAAAGMWKDV 465
>gi|302782183|ref|XP_002972865.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
gi|300159466|gb|EFJ26086.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
Length = 597
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/584 (30%), Positives = 315/584 (53%), Gaps = 29/584 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-LSFALRMNLI----GVVF 55
+ MY K G D A +F+++ ++ SWN +++ F ++ S AL +I G++
Sbjct: 21 VQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGHPERSVALFWRMIREEPGIIP 80
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T+ AL + G ++H L + GL+S+ VG A++TMY + L +A+RVF
Sbjct: 81 TRITFLHALE---KLKNLAEGRKIHELAITVGLESDPAVGTAIVTMYGKSRSLADAKRVF 137
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D++ +D V+W A+++ YTQ+G + EA+ M G+ + +FT AC L
Sbjct: 138 DQLKRRDVVAWTALITAYTQNG-HCEEALDLYSSMDPDGVAPNQYTFTIVIDACAELGRL 196
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM- 234
++G IH G + + V N L++ Y C+ DA ++F+RM R+ +SW +MI+
Sbjct: 197 DVGIAIHARITAAGLESWIEVANSLINLYGNCKRLRDAERIFQRMPRRSSVSWNSMIAAY 256
Query: 235 ----NREDAVSLFKEMRLDGVCPND-VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ DA+ L+K MR DG D VTF+ ++ A + GR IH I S
Sbjct: 257 AHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQEDLAAGRSIHRDAIARGLGSH 316
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ + ++MY R S+++S F+ + ++ ++W+A+I+ AQNG S +A+ + +I
Sbjct: 317 LVLASAAVSMYGRCGSVEESMATFERMEIKDGVAWSAVIAALAQNGESSSALHFYRRMIW 376
Query: 350 ES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
S +PN TF SVL A A++ G + H HI+ G+ ++ +A+ +MY K G
Sbjct: 377 SSSARPNEATFISVLEACSFADE-----GIKIHQHIVDSGIVHSTMISTAIFNMYAKCGR 431
Query: 408 IFESQRVFNET-------QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
+ ++ +F+ Q ++ +W +ISALARHG + + F+EM +G +P I
Sbjct: 432 LDRAREIFSSMRASRGSFQSANDVSWMNMISALARHGSIDEALELFREMRLEGGKPSEIV 491
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
F+S+L C +G + +G F +M++D+ + P +HY C++D+LGR G L+ A++LV Q+
Sbjct: 492 FISILHGCSHSGTMEQGLGHFLAMIQDHGLAPRVEHYGCLIDLLGRGGHLDLAQDLVDQM 551
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYV 564
P P + LG+CR+H + + E A + ++EP + YV
Sbjct: 552 PFEPDARAWSNFLGSCRLHSDRDRAEAAAIRVFELEPEKAAIYV 595
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 150/514 (29%), Positives = 248/514 (48%), Gaps = 53/514 (10%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH I + G S YV N ++ MY + G + +A VF + ++ SWN I++ + Q+G
Sbjct: 1 LHCWIRERGHGSSTYVSNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNG- 59
Query: 139 YGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
+ ++ M+R+ G+ ++F A KNL G++IH ++I +G + +V
Sbjct: 60 HPERSVALFWRMIREEPGIIPTRITFLHALEKL---KNLAEGRKIHELAITVGLESDPAV 116
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGV 251
G +++ Y K DA +VF ++ R+V++WT +I+ + E+A+ L+ M DGV
Sbjct: 117 GTAIVTMYGKSRSLADAKRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDGV 176
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
PN TF +I A + + G IH S V N LI +Y + ++D+E+
Sbjct: 177 APNQYTFTIVIDACAELGRLDVGIAIHARITAAGLESWIEVANSLINLYGNCKRLRDAER 236
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAE 369
+F + R +SWN++I+ YA NG A+ + + + K + TF +VL A + E
Sbjct: 237 IFQRMPRRSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQE 296
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
D L G+ H I GL S ++ SA + MYG+ GS+ ES F + K AW+A+
Sbjct: 297 D--LAAGRSIHRDAIARGLGSHLVLASAAVSMYGRCGSVEESMATFERMEIKDGVAWSAV 354
Query: 430 ISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVCG-------------RNGMIH 475
I+ALA++G+ S ++ ++ M + RP+ TF+SVL C +G++H
Sbjct: 355 IAALAQNGESSSALHFYRRMIWSSSARPNEATFISVLEACSFADEGIKIHQHIVDSGIVH 414
Query: 476 -------------------KGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAE 514
+ R +F SM S + S M+ L R G ++EA
Sbjct: 415 STMISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQSANDVSWMNMISALARHGSIDEAL 474
Query: 515 ELVGQIP---GGPGLSVLQSLLGACRIHGNVEMG 545
EL ++ G P V S+L C G +E G
Sbjct: 475 ELFREMRLEGGKPSEIVFISILHGCSHSGTMEQG 508
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 148/278 (53%), Gaps = 15/278 (5%)
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S V N ++ MY + S+ D+ VF + R + SWN +I+ +AQNG +V F+ +
Sbjct: 12 SSTYVSNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGHPERSVALFWRM 71
Query: 348 IKESK---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
I+E P TF L + +L G++ H I VGL+SDP VG+A++ MYGK
Sbjct: 72 IREEPGIIPTRITFLHALEKLK-----NLAEGRKIHELAITVGLESDPAVGTAIVTMYGK 126
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
S+ +++RVF++ + + AWTA+I+A ++G E ++ + M+ GV P+ TF V
Sbjct: 127 SRSLADAKRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDGVAPNQYTFTIV 186
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
+ C G + G + + + +E + + ++++ G RL +AE + ++P
Sbjct: 187 IDACAELGRLDVGIAIH-ARITAAGLESWIEVANSLINLYGNCKRLRDAERIFQRMPRRS 245
Query: 525 GLSVLQSLLGACRIHGN----VEMGERI-ADALMKMEP 557
+S S++ A +G+ +++ +R+ D +K++P
Sbjct: 246 SVS-WNSMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDP 282
>gi|296085266|emb|CBI28998.3| unnamed protein product [Vitis vinifera]
Length = 732
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 194/619 (31%), Positives = 325/619 (52%), Gaps = 21/619 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVV--- 54
+ MY K G L +F + ++VSW V+SG ++ + L L M G+V
Sbjct: 118 IRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNE 177
Query: 55 --FDAVTYS-TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
VT + AL CL FG Q+H LI++ + V N+L+ MY + G + A
Sbjct: 178 FALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYA 237
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+VFD + +KD +SWN + +G +Q GD E ++M GL+ + V+F+ CG
Sbjct: 238 LKVFDRLQDKDIISWNTVFAGLSQ-GDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGE 296
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+L G Q H ++ + G SV + L++ +S+C A VF +++ + M
Sbjct: 297 ALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEM 356
Query: 232 IS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS + +A++LF + G+ ++ TF + A K GR +HG +K+ F
Sbjct: 357 ISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGF 416
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S+ VC+ L+ Y F + DS + F+ + +++SW A+IS G S A+
Sbjct: 417 ASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAI-GLLN 475
Query: 347 VIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+KE+ KP+ + FGS+ N + + + HS ++K+G ++ V SA++D Y K
Sbjct: 476 RLKEAGGKPDEFIFGSIFNCCAGIA--AYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAK 533
Query: 405 RGSIFESQRVFNETQE-KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
G I ++RVF++T + + ++ A A HG + F++M+ + P TF+S
Sbjct: 534 CGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVS 593
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
V++ C G++ +G F SM DY ++PSPD+Y C+VD+ R G LE+A+ ++ +P
Sbjct: 594 VISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFP 653
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
P ++ +SLL CRIHGN E+GE A L+++ P +YVL+S +Y+E+G W A +R
Sbjct: 654 PWPAIWRSLLNGCRIHGNKELGEWAAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVR 713
Query: 584 KGMKSKGVRKEVGFSWADV 602
KGM +G+ K+ G SW ++
Sbjct: 714 KGMIERGLWKDPGCSWIEI 732
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 150/519 (28%), Positives = 240/519 (46%), Gaps = 22/519 (4%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D STAL+ + + L G Q+H+ I+K G ++++ N LI MY++ G L +VF
Sbjct: 75 DPTALSTALTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVF 134
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH---- 171
EMP K+ VSW ++SG Q+G++ + + +EM+R GL + + AC
Sbjct: 135 GEMPMKNLVSWTLVVSGAVQNGEFEM-GLGVYLEMIRTGLVPNEFALGCVTKACAALGGC 193
Query: 172 --EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
NL G+QIHG+ I+ G +V N LM Y K A KVF R+ D+++ISW
Sbjct: 194 LVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWN 253
Query: 230 TMIS--MNREDAVSL---FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
T+ + +DA + F ++ L G+ PN VTF L + G H L +
Sbjct: 254 TVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRF 313
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
E SV + LI M++R +M+ + VFD + I + N +ISGY N + A+ F
Sbjct: 314 GISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLF 373
Query: 345 FGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + + TF S L A E+ L G++ H I+K G S V S+LL Y
Sbjct: 374 CNLNGLGLEADECTFSSALEACFRTENQKL--GRQMHGTIVKSGFASQGYVCSSLLKCYV 431
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
G + +S FN + +W A+ISAL G + ++ G +PD F S
Sbjct: 432 GFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGS 491
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
+ C + + + S++ E S ++D + G +E A + Q
Sbjct: 492 IFNCCAGIAAYRQTKSV-HSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRF 550
Query: 524 PGLSVLQSLLGACRIHG----NVEMGERIADALMKMEPA 558
+ + +++ A HG VE E++ L +EP+
Sbjct: 551 RDVILFNTMVMAYAHHGLVREAVETFEKM--KLATLEPS 587
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 161/346 (46%), Gaps = 18/346 (5%)
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
R D + ++A + + K + LG QIH IK+G+ + N L+ Y+KC
Sbjct: 72 FRNDPTALSTALTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGL 131
Query: 215 KVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAIS--- 266
KVF M +N++SWT ++S ++ + ++ EM G+ PN+ + A +
Sbjct: 132 KVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALG 191
Query: 267 ----IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
+GNL GR IHGL I++ +V N L+ MY + + KVFD L ++II
Sbjct: 192 GCLVVGNL-NFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDII 250
Query: 323 SWNALISGYAQNGLSLAAVQAFFG--VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
SWN + +G +Q G + FF ++ KPN TF + G A D L G + H
Sbjct: 251 SWNTVFAGLSQ-GDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALD--LVSGLQFH 307
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
+ G+ + V S+L++M+ + G++ + VF+ KS +IS +
Sbjct: 308 CLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNA 367
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+N F + G+ D TF S L C R GR + +++K
Sbjct: 368 EALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVK 413
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 184/560 (32%), Positives = 313/560 (55%), Gaps = 19/560 (3%)
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
+ V+ N ++ Y++ ++ AR++FDE P D+VS+N ++SGY D V A++
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYA-DARETVAAMVLFK 129
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
M G +D + + +AC ++L KQ+H ++ G+ ++ SV N ++ YSK
Sbjct: 130 RMRELGFEVDGFTLSGLIAACC--DRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 209 VTGDANKVFRRMHD-RNVISWTTMI---SMNRE--DAVSLFKEMRLDGVCPNDVTFIGLI 262
+ +A VF M R+ +SW +MI ++E A++L+KEM G + T ++
Sbjct: 188 LLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF---ESMQDSEKVFDELSCR 319
+A++ + + GR HG IK F V + LI Y++ + M DSEKVF E+
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSP 307
Query: 320 EIISWNALISGYAQNG-LSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQ 377
+++ WN +ISGY+ N S AV++F + + +P+ +F V +A S G+
Sbjct: 308 DLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS--QGK 365
Query: 378 RCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
+ H IK + S+ I V +AL+ +Y K G++ +++RVF+ E + ++ +I A+H
Sbjct: 366 QIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQH 425
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
G + ++ M + G+ P++ITF+++L+ C G + +G+ F++M + + IEP +H
Sbjct: 426 GHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEH 485
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
YSCM+D+LGR G+LEEAE + +P PG +LLGACR H N+ + ER A LM M+
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQ 545
Query: 557 PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDN 616
P + YV+++N+YA+ G WE +A +RK M+ K +RK+ G SW +V H F + D
Sbjct: 546 PLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKK--HVFVAEDW 603
Query: 617 THPRSEEIYRMAECLGSEMK 636
+HP E+ E + +MK
Sbjct: 604 SHPMIREVNEYLEEMMKKMK 623
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 146/464 (31%), Positives = 238/464 (51%), Gaps = 24/464 (5%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTY 60
Y K + A +F+ PD VS+NT++SG+ + + A+ RM +G D T
Sbjct: 84 YAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTL 143
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S ++ C D + QLH V G DS V NA +T YS+ G L EA VF M
Sbjct: 144 SGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDG 201
Query: 121 -KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D VSWN+++ Y Q + G +A+ EM+ KG ++D + S +A +L G+
Sbjct: 202 LRDEVSWNSMIVAYGQHKE-GAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR 260
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKC---EVTGDANKVFRRMHDRNVISWTTMI---S 233
Q HG IK G+ + VG+ L+ YSKC + D+ KVF+ + +++ W TMI S
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYS 320
Query: 234 MNR---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
MN E+AV F++M+ G P+D +F+ + A S + +G+ IHGL IK+N S
Sbjct: 321 MNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNR 380
Query: 291 -SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N LI++Y + ++ D+ +VFD + +S+N +I GYAQ+G A++ + ++
Sbjct: 381 ISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLD 440
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRG 406
PN TF ++L+A + GQ+ + + +K +P S ++D+ G+ G
Sbjct: 441 SGIAPNNITFVAILSACAHCGKVD--EGQK-YFNTMKETFKIEPEAEHYSCMIDLLGRAG 497
Query: 407 SIFESQRVFNETQEKS-EFAWTAIISALARHGDYESVMNQFKEM 449
+ E++R + K AW A++ A +H + KE+
Sbjct: 498 KLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKEL 541
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 189/603 (31%), Positives = 311/603 (51%), Gaps = 21/603 (3%)
Query: 44 FALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYS 103
F M+ +G+ + +Y C G H+ + + +S ++ N ++ MY
Sbjct: 79 FIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILKMYC 137
Query: 104 RWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFT 163
A R FD++ ++D SW+ I+S YT++G EA+ + M+ G+ + F+
Sbjct: 138 DCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRID-EAVRLFLRMLDLGITPNSSIFS 196
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
+ + L+LGKQIH I++G+ ++S+ ++ + Y KC A +M +
Sbjct: 197 TLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRK 256
Query: 224 NVISWT------TMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI 277
N ++ T T + NR DA+ LF +M +GV + F ++ A + + G+ I
Sbjct: 257 NAVACTGLMVGYTKAARNR-DALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQI 315
Query: 278 HGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS 337
H CIK SE SV L+ Y + + + + F+ + SW+ALI+GY Q+G
Sbjct: 316 HSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQF 375
Query: 338 LAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
A++ F + K N++ + ++ A A D L G + H+ IK GL + S
Sbjct: 376 DRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSD--LICGAQIHADAIKKGLVAYLSGES 433
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
A++ MY K G + + + F + AWTAII A A HG + FKEM+ GVRP
Sbjct: 434 AMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRP 493
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+++TF+ +L C +G++ +G+ + DSM +Y + P+ DHY+CM+D+ R G L+EA E+
Sbjct: 494 NAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEV 553
Query: 517 VGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDW 576
+ +P P + +SLLG C H N+E+G AD + +++P S +YV+M NLYA G W
Sbjct: 554 IRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKW 613
Query: 577 EMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ A RK M + +RKEV SW V +H F GD HP++E+IY S++K
Sbjct: 614 DEAAQFRKMMAERNLRKEVSCSWIIVK--GKVHRFVVGDRHHPQTEQIY-------SKLK 664
Query: 637 YLN 639
LN
Sbjct: 665 ELN 667
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 181/354 (51%), Gaps = 14/354 (3%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
NMY K G D A N + + V+ ++ G+ K+ DAL +M GV D
Sbjct: 235 NMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGF 294
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+S L C G Q+HS +K GL+SEV VG L+ Y + R AR+ F+ +
Sbjct: 295 VFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESI 354
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+ SW+A+++GY Q G + A+ + KG+ L+ +T+ AC +L G
Sbjct: 355 HEPNDFSWSALIAGYCQSGQFD-RALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICG 413
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
QIH +IK G ++S + ++S YSKC A++ F + + ++WT +I +
Sbjct: 414 AQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYH 473
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV- 292
+A+ LFKEM+ GV PN VTFIGL++A S LVKEG+ I + + P++
Sbjct: 474 GKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILD-SMSDEYGVNPTID 532
Query: 293 -CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISG-YAQNGLSLAAVQA 343
NC+I +Y+R +Q++ +V L +++SW +L+ G ++ L + + A
Sbjct: 533 HYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAA 586
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 220/466 (47%), Gaps = 44/466 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MYC F A F+ + + D+ SW+T++S + + D+A+ LRM +G+ ++
Sbjct: 133 LKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNS 192
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ST + D G Q+HS +++ G + + + + MY + G L A ++
Sbjct: 193 SIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNK 252
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K++V+ ++ GYT+ +A+L +M+ +G+ LD F+ AC +L
Sbjct: 253 MTRKNAVACTGLMVGYTKAAR-NRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYT 311
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GKQIH IK+G + VSVG L+ Y KC A + F +H+ N SW+ +I
Sbjct: 312 GKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQ 371
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S + A+ +FK +R GV N + + A S + + G IH IK ++ S
Sbjct: 372 SGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSG 431
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-- 350
+ +I+MY++ + + + F + + ++W A+I +A +G + A++ F KE
Sbjct: 432 ESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLF----KEMQ 487
Query: 351 ---SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG---LDS-------DPIVG-- 395
+PNA TF +LNA HS ++K G LDS +P +
Sbjct: 488 GSGVRPNAVTFIGLLNACS-------------HSGLVKEGKKILDSMSDEYGVNPTIDHY 534
Query: 396 SALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ ++D+Y + G + E+ V E +W +++ H + E
Sbjct: 535 NCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLE 580
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 308/555 (55%), Gaps = 14/555 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ I+ GL ++ N+L+ Y G L +A+++F P K+ VSW ++SG ++
Sbjct: 42 QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKN- 100
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
D VEAI EM + + V+ +S A + + + K +H ++ G+ +V V
Sbjct: 101 DCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVC 252
L+ YSK G A ++F M +RNV+SW ++S E+A+ LF MR G+
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220
Query: 253 PNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
+ T + LI A +S+G L + G IHG I+T + ++ + L+ +Y + D+ +
Sbjct: 221 VDFYTIMSLIPASLSVGCL-QVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHR 279
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV--IKESKPNAYTFGSVLNAVGAAE 369
VF E+ +++ +W +++G++ A++ F + I+ K ++ +L++ +
Sbjct: 280 VFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSS--CSH 337
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+L+ G+R H+ IK ++ VGSA++DMY G++ +++R F EK W A+
Sbjct: 338 SGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAM 397
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I+ +G ++ F +M+ G+ PD TF+SVL C GM+++G +F M+K H
Sbjct: 398 IAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSH 457
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
P+ HY+C++D+LGR G+L+ A + +P P V +LLGACRIHGN+++G I+
Sbjct: 458 DIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEIS 517
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
+ +MEP +G YVL+SN+YA G+WE V + R ++SK ++K+ GFS ++ ++
Sbjct: 518 QKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEIN--QEIY 575
Query: 610 GFSSGDNTHPRSEEI 624
F +G+ HP+ +I
Sbjct: 576 TFMAGEKDHPQYFKI 590
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 228/465 (49%), Gaps = 18/465 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
MN Y G A IF++ ++VSW ++SG K+D +A+ M + +A
Sbjct: 63 MNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNA 122
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT S+ L + +H V+ G + V+V AL+ MYS++G + AR++F+
Sbjct: 123 VTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFES 182
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++ VSWNAI+SGY+ G + EAI M RKGL +D + S A L++
Sbjct: 183 MSERNVVSWNAIVSGYSDHG-FSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQV 241
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G IHG I+ GY + LM Y DA++VF M ++V +WT M++
Sbjct: 242 GTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSS 301
Query: 234 -MNREDAVSLFKEMR-LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + A+ F +M + + + + +G++ + S +++GR +H L IKT F +
Sbjct: 302 GRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIF 361
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V + +I MYA +++D+++ F + ++++ WNA+I+G NG A+ F +
Sbjct: 362 VGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSG 421
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA-LLDMYGKRGSIF 409
P+ TF SVL A A + G + H++K D + A ++D+ G+ G +
Sbjct: 422 LDPDESTFVSVLYACSHAGMV--YEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLD 479
Query: 410 ESQRVFNETQEKSEF-AWTAIISALARHGDYE---SVMNQFKEME 450
+ N + +F ++ ++ A HG+ + + + EME
Sbjct: 480 AAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEME 524
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 184/360 (51%), Gaps = 10/360 (2%)
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
S AS K+L+ +QIH I G + + N LM+ Y C + DA ++F +
Sbjct: 26 SHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCK 85
Query: 224 NVISWTTMIS-MNRED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
NV+SWT +IS + + D A+ +F+EM + PN VT ++ A + L++ + +H
Sbjct: 86 NVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVH 145
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
++ F V L+ MY++F M + ++F+ +S R ++SWNA++SGY+ +G S
Sbjct: 146 CFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSE 205
Query: 339 AAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSA 397
A+ F + K F ++++ + A+ + L+ G H II+ G ++D + +A
Sbjct: 206 EAIDLF--NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTA 263
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN-KGVRP 456
L+D+Y + ++ RVF+E K AWT +++ + ++ + F +M + ++
Sbjct: 264 LMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKL 323
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
DSI + +L+ C +G + +GR + +K + S ++DM G LE+A+
Sbjct: 324 DSIVLMGILSSCSHSGALQQGRRVHALAIKTC-FANNIFVGSAVIDMYANCGNLEDAKRF 382
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 191/553 (34%), Positives = 288/553 (52%), Gaps = 16/553 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+ + I+ G Y+ L+T+ + R+ AR++FD++P+ + WN++ GY Q
Sbjct: 56 QIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSE 115
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
Y E + +M +R + +F +CG L G+Q+H IK G+ + VG
Sbjct: 116 SYR-EVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVG 174
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEMRLDGVCPN-DV 256
L+ YS GDA K+F M +RNV++WT+MI+ A L RL + P DV
Sbjct: 175 TTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSA-DLVSARRLFDLAPERDV 233
Query: 257 TFIGLIHA--ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
++ + I G++V+ ++ H + + + N ++ YA +++ E +F+
Sbjct: 234 VLWNIMVSGYIEGGDMVEARKLFHEMPNR-----DVMFWNTVLKGYATNGNVEALEGLFE 288
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDIS 372
E+ R I SWNALI GYA NGL + +F ++ ES PN T +VL+A A +
Sbjct: 289 EMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSA--CARLGA 346
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L G+ H + GL + VG+AL+DMY K G I + VF K +W +I
Sbjct: 347 LDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGG 406
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
LA H +N F +M+N G +PD ITF+ +L C G++ G F SM DY I P
Sbjct: 407 LAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMP 466
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
+HY CMVDML R GRLE+A V ++P + LLGACRI+ NVE+ E L
Sbjct: 467 QIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRL 526
Query: 553 MKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFS 612
+++EP +YV++SN+Y + G WE VA L+ M+ G +K G S +V D + F
Sbjct: 527 IELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVN--DAVVEFY 584
Query: 613 SGDNTHPRSEEIY 625
S D HP+ EEIY
Sbjct: 585 SLDERHPQIEEIY 597
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 191/466 (40%), Gaps = 112/466 (24%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + +P+I WN++ G+ +S+ + + +M + + + T+ L C
Sbjct: 92 LFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINA 151
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR------------------------- 107
+ G Q+H ++K G +VG LI MYS G
Sbjct: 152 LIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMING 211
Query: 108 ------LVEARRVFD-------------------------------EMPNKDSVSWNAIL 130
LV ARR+FD EMPN+D + WN +L
Sbjct: 212 YILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVL 271
Query: 131 SGYTQDGDYGVEAILALIEMMRK----------------GLRLD---------------- 158
GY +G+ VEA+ L E M + GL +
Sbjct: 272 KGYATNGN--VEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPP 329
Query: 159 -HVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
+ + SAC L+LGK +H + G +V VGN LM Y+KC + +A VF
Sbjct: 330 NDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVF 389
Query: 218 RRMHDRNVISWTTMI---SMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
R M +++ISW T+I +M+ DA++LF +M+ G P+ +TFIG++ A + LV+
Sbjct: 390 RGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVE 449
Query: 273 EGRMIHGLCIKTNFLSEPSV--CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALIS 329
+G + + ++L P + C++ M AR ++ + ++ + + W L+
Sbjct: 450 DG-FAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLG 508
Query: 330 G---YAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDIS 372
Y L+ A+Q + ++ N ++ G ED++
Sbjct: 509 ACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVA 554
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 14/230 (6%)
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
FI L+ + V + I I F + L+T+ A + M + ++FD++
Sbjct: 41 FISLLQSCKTSKQVHQ---IQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIP 97
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHG 376
I WN++ GYAQ+ V FF + + +PN +TF VL + G +L G
Sbjct: 98 DPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKIN--ALIEG 155
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
++ H +IK G +P VG+ L+DMY G++ ++ ++F E E++ AWT++I+
Sbjct: 156 EQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILS 215
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCG--RNGMIHKGRHLFDSM 484
D S F + P+ L + V G G + + R LF M
Sbjct: 216 ADLVSARRLFD------LAPERDVVLWNIMVSGYIEGGDMVEARKLFHEM 259
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
M+MY K G + A+ +F ++ D++SWNT++ G + DAL+ +M G D
Sbjct: 373 MDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDG 432
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
+T+ L C L +GF + S+ + + ++ ++ M +R GRL +A
Sbjct: 433 ITFIGILCACTHMGLVEDGFAY---FQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMA 489
Query: 114 VFDEMP-NKDSVSWNAIL 130
+MP D V W +L
Sbjct: 490 FVRKMPVEADGVIWAGLL 507
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 51/113 (45%)
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
K + + II G + + L+ + + ++++F++ + + W ++
Sbjct: 52 KQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGY 111
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
A+ Y V+ F +M+ +RP+ TF VL CG+ + +G + ++K
Sbjct: 112 AQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIK 164
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 194/607 (31%), Positives = 320/607 (52%), Gaps = 21/607 (3%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARR 113
FD++ T L + + LQLH+ + G L Y+ L Y+ G + A+
Sbjct: 20 FDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQH 79
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
+FD++ K+S WN+++ GY + A+ ++M+ G + D+ ++ ACG
Sbjct: 80 IFDQIVLKNSFLWNSMIRGYACNNSPS-RALFLYLKMLHFGQKPDNFTYPFVLKACGDLL 138
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
E+G+++H + + G V VGN ++S Y K A VF RM R++ SW TM+S
Sbjct: 139 LREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMS 198
Query: 234 ---MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
N E A +F +MR DG + T + L+ A +K G+ IHG ++
Sbjct: 199 GFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNG--E 256
Query: 289 EPSVCN-----CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
VCN +I MY ES+ + K+F+ L ++++SWN+LISGY + G + A++
Sbjct: 257 SGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALE- 315
Query: 344 FFG--VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
FG V+ + P+ T SVL A +L+ G S+++K G + +VG+AL+ M
Sbjct: 316 LFGRMVVVGAVPDEVTVISVLAACNQIS--ALRLGATVQSYVVKRGYVVNVVVGTALIGM 373
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y GS+ + RVF+E EK+ A T +++ HG ++ F EM KGV PD F
Sbjct: 374 YANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIF 433
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+VL+ C +G++ +G+ +F M +DY +EP P HYSC+VD+LGR G L+EA ++ +
Sbjct: 434 TAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMK 493
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAI 581
P V +LL ACR+H NV++ A L ++ P G YV +SN+YA + WE V
Sbjct: 494 LKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVEN 553
Query: 582 LRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSK 641
+R + + +RK +S+ ++ + +H F GD +H +S++IY + L ++K K
Sbjct: 554 VRALVAKRRLRKPPSYSFVELNKM--VHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYK 611
Query: 642 RERAIAL 648
+ ++ L
Sbjct: 612 PDTSLVL 618
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 188/386 (48%), Gaps = 23/386 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFAL--RMNLIGVVFDA 57
++MY K G + A +F+ + D+ SWNT++SGF K+ +A +F + M G V D
Sbjct: 166 LSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDR 225
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEV---YVGNALITMYSRWGRLVEARRV 114
T LS C D G ++H +V+ G V ++ N++I MY + AR++
Sbjct: 226 TTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKL 285
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F+ + KD VSWN+++SGY + GD +A+ M+ G D V+ S +AC
Sbjct: 286 FEGLRVKDVVSWNSLISGYEKCGD-AFQALELFGRMVVVGAVPDEVTVISVLAACNQISA 344
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
L LG + +K GY +V VG L+ Y+ C A +VF M ++N+ + T M++
Sbjct: 345 LRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTG 404
Query: 234 -----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI-HGLCIKTNFL 287
RE A+S+F EM GV P++ F ++ A S LV EG+ I + + +
Sbjct: 405 FGIHGRGRE-AISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVE 463
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG---YAQNGLSLAAVQA 343
P+ +CL+ + R + ++ V + + + W AL+S + L++ + Q
Sbjct: 464 PRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQK 523
Query: 344 FFGVIKESKPNAYTFGSVLNAVGAAE 369
F E P+ + L+ + AAE
Sbjct: 524 LF----ELNPDGVSGYVCLSNIYAAE 545
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/592 (29%), Positives = 323/592 (54%), Gaps = 44/592 (7%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLH+ ++KF S + + L+++YS L ++ R+F+ + +++W +++ YT G
Sbjct: 27 QLHAQVLKFQASSLCNL-SLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHG 85
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+++ + I M+ GL DH F S +C +L LG+ +HG I++G + G
Sbjct: 86 -LPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTG 144
Query: 198 NVLMSTYSKCEVTGDA--------------------------------NKVFRRMHDRNV 225
N LM+ YSK ++ K+F M ++++
Sbjct: 145 NALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDL 204
Query: 226 ISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+SW T+I+ N E+ + + +EM + P+ T ++ I+ + G+ IHG
Sbjct: 205 VSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGC 264
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
I+ ++ V + LI MYA+ + DS +VF L+ R+ ISWN++I+G QNGL
Sbjct: 265 SIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEG 324
Query: 341 VQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
++ F ++ + KP +Y+F S++ A A +L G++ H +I + G D + + S+L+
Sbjct: 325 LRFFRQMLMAKIKPKSYSFSSIMPA--CAHLTTLHLGKQLHGYITRNGFDENIFIASSLV 382
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
DMY K G+I ++++F+ + + +WTA+I A HG + F++ME +G++P+ +
Sbjct: 383 DMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHV 442
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
F++VLT C G++ + F+SM +D+ I P +HY+ + D+LGR GRLEEA + +
Sbjct: 443 AFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICG 502
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
+ GP S+ +LL ACR+H N++M E++A+ +++++P +G+Y+L++N+Y+ W+
Sbjct: 503 MHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEA 562
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
A R M+ G+RK SW +V + ++ F +GD +HP E+I E L
Sbjct: 563 AKWRASMRRIGIRKTPACSWIEVK--NKVYAFMAGDESHPCYEKIREAMEVL 612
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 191/403 (47%), Gaps = 42/403 (10%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
+Y +L +FN ++ P ++W +V+ + +L + M G+ D
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA-------- 111
+ + L C G LH I++ GLD ++Y GNAL+ MYS+ L E+
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 112 ------------------------RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
R++F+ MP KD VSWN I++G ++G Y E + +
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYE-ETLRMI 227
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
EM L+ D + +S ++ GK+IHG SI+ G + V + L+ Y+KC
Sbjct: 228 REMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKC 287
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLI 262
D+ +VF + +R+ ISW ++I+ + + + F++M + + P +F ++
Sbjct: 288 TRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIM 347
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
A + + G+ +HG + F + + L+ MYA+ +++ ++++FD + R+++
Sbjct: 348 PACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMV 407
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
SW A+I G A +G + A++ F + E KPN F +VL A
Sbjct: 408 SWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTA 450
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 149/272 (54%), Gaps = 9/272 (3%)
Query: 11 DKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFC 67
D IF + D+VSWNT+++G ++ ++ L M + D+ T S+ L
Sbjct: 190 DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLI 249
Query: 68 LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN 127
++ G ++H ++ GLD+++YV ++LI MY++ R+ ++ RVF + +D +SWN
Sbjct: 250 AENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWN 309
Query: 128 AILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
+I++G Q+G + E + +M+ ++ SF+S AC H L LGKQ+HG +
Sbjct: 310 SIIAGCVQNGLFD-EGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 368
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSL 242
G+ ++ + + L+ Y+KC A ++F RM R+++SWT MI DA+ L
Sbjct: 369 NGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIEL 428
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
F++M +G+ PN V F+ ++ A S G LV E
Sbjct: 429 FEQMETEGIKPNHVAFMAVLTACSHGGLVDEA 460
>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 912
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 329/622 (52%), Gaps = 16/622 (2%)
Query: 24 DIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
D+VSW T+LS K +A ++M GV + T+ L G +G LH
Sbjct: 182 DVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLH 241
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
+ ++ FG + + + A++ MYS+ R+V+A +V + P D W ++SG+TQ+
Sbjct: 242 AHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVR 301
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EAI +M GL ++ +++S +A +L+LG+Q H I +G + +GN L
Sbjct: 302 -EAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNAL 360
Query: 201 MSTYSKC-EVTGDANKVFRRMHDRNVISWTTMIS----MNREDAVSLFKEMRLDGVCPND 255
+ Y KC +T +A KVFR + NV+ WT++I+ ED+ LF EM+ GV PN
Sbjct: 361 VDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRLEDSFQLFAEMQAAGVRPNS 420
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
T ++ A S + M+HG IKT + +V N L+ YA + ++ V
Sbjct: 421 FTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGT 480
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLK 374
++ R+ I++ L + Q G A++ + + K + ++ S L+A AA +++
Sbjct: 481 MNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSA--AAGLGTME 538
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G++ H + +K G V ++L+ +Y K GSI ++ R F + E F+W +IS +
Sbjct: 539 TGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFS 598
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
+G ++ F +M GV+PDSIT LS+++ C G++ G F SM K+YHI P
Sbjct: 599 WNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKL 658
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
DHY C+VD+LGR GRLEEA ++ ++ P + ++LL AC +HGNV +GE +A ++
Sbjct: 659 DHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLE 718
Query: 555 MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSG 614
++P+ Y+L++NLY G + R+ M+ +G+R+ G W ++ +H FS+G
Sbjct: 719 LDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIR--SRVHHFSAG 776
Query: 615 DNTHPRSEEIYRMAECLGSEMK 636
+ + +EI E L +E +
Sbjct: 777 EKIN--EDEITEKLEFLITEFR 796
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 246/475 (51%), Gaps = 33/475 (6%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
LSFC + G+ +HS I+K GL ++Y+ N L+++Y++ + AR +FDEMPN+D
Sbjct: 22 LSFC-NSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDV 80
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
VSW ILS +T+ + +A+ M+ G + + +SA +C E G QIH
Sbjct: 81 VSWTTILSSHTKTKHHS-DALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHC 139
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTG-DANKVFRRMHD-RNVISWTTMISMNRE---- 237
++K+G + VG L+ Y+KC +A K+ + D +V+SWTTM+S E
Sbjct: 140 SAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKW 199
Query: 238 -DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI----KTNFLSEPSV 292
+A ++ +M GV PN+ TF+ L+ A+S + G+++H I + N + + +V
Sbjct: 200 GEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAV 259
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
+ MY++ M D+ KV + ++ W LISG+ QN A+ F + +
Sbjct: 260 ----VDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGL 315
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
PN +T+ S+LNA ++ +SL G++ HS +I VGL+ D +G+AL+DMY K I +
Sbjct: 316 LPNNFTYSSLLNA--SSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTN 373
Query: 412 Q-RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+VF E + WT++I+ A E F EM+ GVRP+S T ++L C
Sbjct: 374 AVKVFREITSPNVMCWTSLIAGFAEK-RLEDSFQLFAEMQAAGVRPNSFTMSAILGACS- 431
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHY-----SCMVDMLGRVGRLEEAEELVGQI 520
K R L +M+ HI + + +VD VG ++EA ++G +
Sbjct: 432 -----KTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTM 481
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 236/496 (47%), Gaps = 24/496 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K+ +A +F+ + N D+VSW T+LS K+ DAL M G +
Sbjct: 56 LSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNE 115
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRL-VEARRVFD 116
T S+AL C F G+Q+H VK GL+ +VG +L+ Y++ G VEA ++
Sbjct: 116 FTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLS 175
Query: 117 EMPN-KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ + D VSW +LS ++G +G EA ++M+ G+ + +F A L
Sbjct: 176 LVKDGGDVVSWTTMLSSLVENGKWG-EAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGL 234
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
GK +H I G ++ + ++ YSKC DA KV + +V WTT+IS
Sbjct: 235 SYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGF 294
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +A+S+F++M L G+ PN+ T+ L++A S + G H I +
Sbjct: 295 TQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDL 354
Query: 291 SVCNCLITMYARFESM-QDSEKVFDELSCREIISWNALISGYAQNGLS-----LAAVQAF 344
+ N L+ MY + + ++ KVF E++ ++ W +LI+G+A+ L A +QA
Sbjct: 355 YIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRLEDSFQLFAEMQA- 413
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
GV +PN++T ++L A SL H HIIK +D D V +AL+D Y
Sbjct: 414 AGV----RPNSFTMSAILGACSKTR--SLVPTMMLHGHIIKTKVDIDIAVANALVDTYAG 467
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G I E+ V + +T + + L + G + + M N G++ D + S
Sbjct: 468 VGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASF 527
Query: 465 LTVCGRNGMIHKGRHL 480
L+ G + G+ L
Sbjct: 528 LSAAAGLGTMETGKQL 543
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K G A F +++ PD SWN ++SGF + ALS M L GV D+
Sbjct: 563 VHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDS 622
Query: 58 VTYSTALSFCLDHEGFL-FGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T + +S C H G L GL+ HS+ ++ + ++ L+ + R GRL EA V
Sbjct: 623 ITLLSLISAC-SHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVI 681
Query: 116 DEMPNK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLD 158
++M K DS+ +L+ G+ + +M R+ L LD
Sbjct: 682 EKMSFKPDSLICKTLLNACNLHGNVALGE-----DMARRCLELD 720
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 212/655 (32%), Positives = 313/655 (47%), Gaps = 103/655 (15%)
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD---- 138
IVK S++ V N +I+ Y +WG LV+AR +FDEMP ++ VSW+A++SG + G
Sbjct: 78 IVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEES 137
Query: 139 --------------------------YGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
EA+ ++ G+R + V+FTS ACG
Sbjct: 138 MWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMS-------------TYSKCEV---------- 209
+ LG I G+ +K G+ ++SV N L++ + + E
Sbjct: 198 GDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 210 -----TGD---ANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDV 256
TGD A ++F M +RN ISW+ MI S E+A+ LF +M +G PN
Sbjct: 258 DAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNIS 317
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
F + A++ + G IHG K + + + LI +Y + D VFD +
Sbjct: 318 CFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLI 377
Query: 317 SCREIISWNALISGYAQNG-----------------LSLAAVQAFFG------------- 346
+ ++ WN+++ GY+ NG S + A +
Sbjct: 378 LEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFN 437
Query: 347 --VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
++ PN TF SVL A A SL G H IIK+G+ D VG+AL DMY K
Sbjct: 438 TLLVSGQTPNKSTFSSVLCA--CASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAK 495
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLS 463
G I S++VF EK+E +WT +I LA G + F+EME V P+ + LS
Sbjct: 496 CGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLS 555
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL C G++ KG F+SM K Y I+P HY+C+VD+L R GRL EAEE + IP
Sbjct: 556 VLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQ 615
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
P + +LL C+ + + ++ ER A L ++ S YVL+SN+YA G W V+ +R
Sbjct: 616 PEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIR 675
Query: 584 KGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
K M+ KG++K G SW +V + +H F S D +H +S+EIY + L SEM L
Sbjct: 676 KLMREKGLKKSGGCSWVEVR--NQVHSFYSEDGSHSQSDEIYGTLQLLRSEMLVL 728
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 178/377 (47%), Gaps = 53/377 (14%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y ++G +A IF+ + + +SW+ +++ + +S ++AL +M G +
Sbjct: 257 LDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNI 316
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ LS G+ +H + K G+D +V++G++LI +Y + G+ + R VFD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL 376
Query: 118 MPNKDSVSWNAILSGYT------------------QDGDYGV-----------EAILALI 148
+ K+ V WN+++ GY+ D +G E +L +
Sbjct: 377 ILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVF 436
Query: 149 E-MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
++ G + +F+S AC +L+ G +HG IK+G + VG L Y+KC
Sbjct: 437 NTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC 496
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEM-RLDGVCPNDVTFIGL 261
G + +VF RM ++N ISWT MI E +++ LF+EM R V PN++ + +
Sbjct: 497 GDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSV 556
Query: 262 IHAISIGNLVKEG-------RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
+ A S LV +G ++G+ K + C++ + +R + ++E+
Sbjct: 557 LFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYT------CVVDLLSRSGRLYEAEEFIR 610
Query: 315 ELSCR-EIISWNALISG 330
+ + E +W AL+SG
Sbjct: 611 TIPFQPEANAWAALLSG 627
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 148/367 (40%), Gaps = 55/367 (14%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T + L+ S L+ +G ++H IKT F S+ + L+ +Y + +++ E
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHG 376
+++ N +IS Y Q G +L + F + E ++
Sbjct: 83 DGSDLVVSNCMISAYVQWG-NLVQARLLFDEMPERNEVSW-------------------- 121
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
SAL+ K G + ES F ++ +WTA IS R+
Sbjct: 122 -------------------SALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRN 162
Query: 437 G-DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
G ++E++ F+ +E+ GVRP+ +TF SV+ CG G G + ++K +
Sbjct: 163 GLNFEALKLFFRLLES-GVRPNDVTFTSVVRACGELGDFGLGMSILGLVVK-----AGFE 216
Query: 496 HY----SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
HY + ++ + R+G ++ A + ++ +S ++L A G++ RI D
Sbjct: 217 HYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVS-WTAILDAYVETGDLREARRIFD- 274
Query: 552 LMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGF 611
+M S+ M Y++ G E L M +G + + + + L
Sbjct: 275 --EMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRAL 332
Query: 612 SSGDNTH 618
S+G N H
Sbjct: 333 SAGINIH 339
>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
Length = 1007
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 200/648 (30%), Positives = 330/648 (50%), Gaps = 44/648 (6%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAV 58
+ Y K+G D AL +F+++ + D VSWN ++ G SD L + + +I +
Sbjct: 92 DFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVS 151
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T A+ C GL++H I++ G V N+L++MY+ + A +FDEM
Sbjct: 152 TLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEM 210
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+D +SW+ ++ GY Q G+ + L L + LD ++ S AC + ++ +G
Sbjct: 211 CERDVISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMG 270
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----- 233
+ +HGV I G + VGN ++ YSK + A K F M RN +SW ++IS
Sbjct: 271 RSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRT 330
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+A+SLF M G ++VT + L+ + + + IH + I+ + V
Sbjct: 331 EKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVI 390
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESK 352
N LI Y++ + ++ + K+FD L ++ +SW+A+I+G+ G A+ F + + + K
Sbjct: 391 NSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEK 450
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN T S+L A + D LK + H I+ GL ++ VG+A+LDMY K G I S+
Sbjct: 451 PNGVTILSLLEAFSVSAD--LKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSR 508
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+ F++ EK+ +W A+I+A +G + EM+ G++P+ +T LSVL+ C G
Sbjct: 509 KAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGG 568
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP----GGPGLSV 528
++ +G F++M++D+ +EP +HYSCMVDML R G+L A L+ ++P G GL
Sbjct: 569 LVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNLIEKMPERMRDGAGL-- 626
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LL ACR GN +G A ++ +EP S Y L S++YA G +V + K +
Sbjct: 627 WGALLSACRSSGNSRLGAGAAXRVLXLEPQSSAGYFLASSMYAASG---LVHVEDKAWR- 682
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
F +GD +HPR+ EI+ + E L MK
Sbjct: 683 ----------------------FVAGDESHPRAGEIWGVVEQLHDCMK 708
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 228/478 (47%), Gaps = 25/478 (5%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G +H+ ++K G DS GN+ Y + G L A VFD M ++DSVSWN ++ G+
Sbjct: 68 GKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLS 127
Query: 136 DG--DYGV----EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
G D G+ +A + E L L A AC +E G ++HG I+ G
Sbjct: 128 RGASDXGLWWFRQARVIAFEPNVSTLVL-------AIHACRSLGAMEEGLKMHGYIIRSG 180
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFK 244
+ SV N L+S Y+ ++ A ++F M +R+VISW+ MI + A+ LF
Sbjct: 181 FLDIPSVQNSLLSMYADNDME-RAEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLFL 239
Query: 245 EMRLDGVCPND-VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
EM + D +T + ++ A + + GR +HG+ I + V N +I MY++
Sbjct: 240 EMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKX 299
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVL 362
+ + + K F+E+ CR +SWN++ISG + A+ F+ + K + + T ++L
Sbjct: 300 DDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLL 359
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
+ D + HS +I+ G + + V ++L+D Y K I + ++F+ + K
Sbjct: 360 QSCKYFVDPF--QCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKD 417
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
+W+A+I+ G + + F+EM +P+ +T LS+L + + + +
Sbjct: 418 TVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHG 477
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
++ + + ++DM + G + + + QIP +S +++ AC ++G
Sbjct: 478 IXIRR-GLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVS-WGAMIAACGMNG 533
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 180/351 (51%), Gaps = 21/351 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K + A FN + + VSWN+++SG EK +ALS M G D
Sbjct: 293 IDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADE 352
Query: 58 VTYSTALSFCLDHEGFLFGLQ---LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
VT L C + F+ Q +HS+++++G + +V N+LI YS+ + A ++
Sbjct: 353 VTLVNLLQSC---KYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKL 409
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD + KD+VSW+A+++G+ G EAI EM + + + V+ S A +
Sbjct: 410 FDRLKTKDTVSWSAMIAGFNHCGKPD-EAIALFQEMNQAQEKPNGVTILSLLEAFSVSAD 468
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
L+ K HG+ I+ G V+VG ++ Y+KC G + K F ++ ++N++SW MI+
Sbjct: 469 LKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAA 528
Query: 234 --MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
MN DA++L EM+L G+ PN VT + ++ A S G LV+EG ++ + + E
Sbjct: 529 CGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGLSFFENMVQDHGV-E 587
Query: 290 PSV--CNCLITMYARFESMQDSEKVFDELSCREIIS---WNALISGYAQNG 335
P + +C++ M R + + + +++ R W AL+S +G
Sbjct: 588 PGLEHYSCMVDMLXRAGKLNXAMNLIEKMPERMRDGAGLWGALLSACRSSG 638
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 11/246 (4%)
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
+A S + +M+ G D T + I V+ G+ IH +K F S S N
Sbjct: 32 EACSRYHQMKKAGAQLTDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSXX 91
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAY 356
Y + ++ + VFD + R+ +SWN +I G+ G S + F + +PN
Sbjct: 92 DFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVS 151
Query: 357 TFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
T ++A +GA E+ G + H +II+ G P V ++LL MY + ++
Sbjct: 152 TLVLAIHACRSLGAMEE-----GLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEE 205
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRNG 472
+F+E E+ +W+ +I + G+ + F EM N + D IT +SVL C G
Sbjct: 206 LFDEMCERDVISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTG 265
Query: 473 MIHKGR 478
I GR
Sbjct: 266 DISMGR 271
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 313/599 (52%), Gaps = 15/599 (2%)
Query: 26 VSWNTVLSGFEKSDDALSFALRMNLI---GVVFDAVTYSTALSFCLDHEGFLFGLQLHSL 82
VSWN +L+ + + D L + + G T T L C++ G +H L
Sbjct: 228 VSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGL 287
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVE 142
++K GL+++ + N LI MYS+ +A VF + D V + ++S + + D E
Sbjct: 288 VIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRH-DMAPE 346
Query: 143 AILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMS 202
A ++M G++ + +F A ++ L + IH +K G+ V + ++
Sbjct: 347 AFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVG 406
Query: 203 TYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVT 257
Y K DA F M ++ SW T++S N E + +FKE+ +GV N T
Sbjct: 407 MYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYT 466
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
++G++ + ++ G +H +K+ F + V L+ MY + ++ VFD L
Sbjct: 467 YVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLK 526
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHG 376
R++ SW ++S YA+ A++ F +++E+K PN T + L+ ++ L G
Sbjct: 527 ERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSV--CSDLACLGSG 584
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
+ HS+ IK G +S +V SAL+DMY K G++ +++ +F+E+ W II A+H
Sbjct: 585 LQLHSYTIKSGWNSS-VVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQH 643
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
G + F+EM ++G PD ITF+ VL+ C G++ +GR F + Y I P+ +H
Sbjct: 644 GHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEH 703
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
Y+CMVD+L + G+L EAE L+ ++P P S+ +++LGACR+HGN+E+ ER A+ L + +
Sbjct: 704 YACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQ 763
Query: 557 PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGD 615
P S +L+SN+YA+ W VA LR + +GV+KE G SW ++ LH F S D
Sbjct: 764 PDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEIN--GKLHVFLSQD 820
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 254/528 (48%), Gaps = 14/528 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDA 57
+NMYCK G+ A +F+ + + D+V+W ++S + DA L M+ GVV +
Sbjct: 102 LNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNG 161
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ AL C F Q+H+ VK + YV ++L+ Y G + A R +
Sbjct: 162 FALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLD 221
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
P + VSWNA+L+ Y +DGDY + +L +++ G + + + C +
Sbjct: 222 SPVRSDVSWNALLNEYARDGDYA-KVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKS 280
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR 236
G+ +HG+ IK G T + N L+ YSKC DA +VF R+ + +V+ + MIS +R
Sbjct: 281 GQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDR 340
Query: 237 ED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
D A +F +M GV PN TF+GL S V R IH +K+ F V
Sbjct: 341 HDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGV 400
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
C+ ++ MY + ++QD+ FD + +I SWN L+SG+ ++ F +I E
Sbjct: 401 CDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGV 460
Query: 353 -PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
N YT+ +L + D L+ G + H+ ++K G D V LLDMY + G +
Sbjct: 461 LANKYTYVGILRCCTSLMD--LRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNA 518
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VF+ +E+ F+WT ++S A+ + E + F+ M + RP+ T + L+VC
Sbjct: 519 RLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDL 578
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
+ G L +K S S +VDM + G L +AE L +
Sbjct: 579 ACLGSGLQLHSYTIKSGW--NSSVVSSALVDMYVKCGNLADAEMLFDE 624
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 198/416 (47%), Gaps = 9/416 (2%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+Y+ AL C G LH+ +++ G + ++ ++L+ MY + GRL +AR VFD M
Sbjct: 62 SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P++D V+W A++S T GD G A+ EM +G+ + + +A AC +L
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGA-ALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFT 180
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED 238
Q+H ++K+ V + L+ Y C A + R+ +SW +++ D
Sbjct: 181 PQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARD 240
Query: 239 -----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ +F ++ G + T ++ L K G+ +HGL IK ++ +
Sbjct: 241 GDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLN 300
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
NCLI MY++ S +D+ +VF + +++ + +IS + ++ ++ A F + K
Sbjct: 301 NCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVK 360
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN YTF + D++L + H+HI+K G V A++ MY K G++ ++
Sbjct: 361 PNQYTFVGLAIVASRTGDVNL--CRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAI 418
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
F+ Q +W ++S + E + FKE+ +GV + T++ +L C
Sbjct: 419 LAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCC 474
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 160/352 (45%), Gaps = 12/352 (3%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
++ + + ++ G+ +H +++ + + + L+ MY + + D+ VFD +
Sbjct: 62 SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKH 375
R++++W A++S G + AA++ F + +E PN + + L A D+
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFT- 180
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
+ H+ +K+ DP V S+L++ Y G + ++R ++ +S+ +W A+++ AR
Sbjct: 181 -PQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYAR 239
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
GDY VM F ++ G T +VL C G+ G+ + ++K +E
Sbjct: 240 DGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIK-RGLETDRV 298
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM 555
+C+++M + E+A E+ +I P + V SL+ +C +M D M+M
Sbjct: 299 LNNCLIEMYSKCLSAEDAYEVFARI-DEPDV-VHCSLMISC--FDRHDMAPEAFDIFMQM 354
Query: 556 EPAG----SGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG 603
G ++V ++ + + GD + + + G + G A VG
Sbjct: 355 SDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVG 406
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G A +F+ + D+V WNT++ G+ + AL M G V D
Sbjct: 606 VDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDE 665
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T+ LS C H G L G + L+ +G+ + ++ + ++ G+L EA +
Sbjct: 666 ITFVGVLSAC-SHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLI 724
Query: 116 DEMP-NKDSVSWNAILSGYTQDGD 138
+EMP D+ W IL G+
Sbjct: 725 NEMPLTPDASLWKTILGACRMHGN 748
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 212/655 (32%), Positives = 313/655 (47%), Gaps = 103/655 (15%)
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD---- 138
IVK S++ V N +I+ Y +WG LV+AR +FDEMP ++ VSW+A++SG + G
Sbjct: 78 IVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEES 137
Query: 139 --------------------------YGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
EA+ ++ G+R + V+FTS ACG
Sbjct: 138 MWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMS-------------TYSKCEV---------- 209
+ LG I G+ +K G+ ++SV N L++ + + E
Sbjct: 198 GDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 210 -----TGD---ANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDV 256
TGD A ++F M +RN ISW+ MI S E+A+ LF +M +G PN
Sbjct: 258 DAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNIS 317
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
F + A++ + G IHG K + + + LI +Y + D VFD +
Sbjct: 318 CFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLI 377
Query: 317 SCREIISWNALISGYAQNG-----------------LSLAAVQAFFG------------- 346
+ ++ WN+++ GY+ NG +S + A +
Sbjct: 378 LEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFN 437
Query: 347 --VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
++ PN TF SVL A A SL G H IIK+G+ D VG+AL DMY K
Sbjct: 438 TLLVSGQTPNKSTFSSVLCA--CASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAK 495
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLS 463
G I S++VF EK+E +WT +I LA G + F+EME V P+ + LS
Sbjct: 496 CGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLS 555
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL C G++ KG F+SM K Y I+P HY+C+VD+L R GRL EAEE + IP
Sbjct: 556 VLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQ 615
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
P + +LL C+ + + ++ ER A L ++ S YVL+SN+YA G W V+ +R
Sbjct: 616 PEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIR 675
Query: 584 KGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
K M+ KG++K G SW +V + +H F S D +H +S EIY + L SEM L
Sbjct: 676 KLMREKGLKKSGGCSWVEVR--NQVHSFYSEDGSHSQSNEIYGTLQLLRSEMLVL 728
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 179/377 (47%), Gaps = 53/377 (14%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y ++G +A IF+ + + +SW+ +++ + +S ++AL +M G +
Sbjct: 257 LDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNI 316
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ LS G+ +H + K G+D +V++G++LI +Y + G+ + R VFD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL 376
Query: 118 MPNKDSVSWNAILSGYTQDG------------------DYGV-----------EAILALI 148
+ K+ V WN+++ GY+ +G +G E +L +
Sbjct: 377 ILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVF 436
Query: 149 E-MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
++ G + +F+S AC +L+ G +HG IK+G + VG L Y+KC
Sbjct: 437 NTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC 496
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEM-RLDGVCPNDVTFIGL 261
G + +VF RM ++N ISWT MI E +++ LF+EM R V PN++ + +
Sbjct: 497 GDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSV 556
Query: 262 IHAISIGNLVKEG-------RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
+ A S LV +G ++G+ K + C++ + +R + ++E+
Sbjct: 557 LFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYT------CVVDLLSRSGRLYEAEEFIR 610
Query: 315 ELSCR-EIISWNALISG 330
+ + E +W AL+SG
Sbjct: 611 TIPFQPEANAWAALLSG 627
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 148/367 (40%), Gaps = 55/367 (14%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T + L+ S L+ +G ++H IKT F S+ + L+ +Y + +++ E
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHG 376
+++ N +IS Y Q G +L + F + E ++
Sbjct: 83 DGSDLVVSNCMISAYVQWG-NLVQARLLFDEMPERNEVSW-------------------- 121
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
SAL+ K G + ES F ++ +WTA IS R+
Sbjct: 122 -------------------SALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRN 162
Query: 437 G-DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
G ++E++ F+ +E+ GVRP+ +TF SV+ CG G G + ++K +
Sbjct: 163 GLNFEALKLFFRLLES-GVRPNDVTFTSVVRACGELGDFGLGMSILGLVVK-----AGFE 216
Query: 496 HY----SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
HY + ++ + R+G ++ A + ++ +S ++L A G++ RI D
Sbjct: 217 HYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVS-WTAILDAYVETGDLREARRIFD- 274
Query: 552 LMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGF 611
+M S+ M Y++ G E L M +G + + + + L
Sbjct: 275 --EMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRAL 332
Query: 612 SSGDNTH 618
S+G N H
Sbjct: 333 SAGINIH 339
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 196/651 (30%), Positives = 342/651 (52%), Gaps = 29/651 (4%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD-DALSFAL--RMNLIGVVFDAVTYSTALSFCLDHEG 72
+ + + + VS+N V+ + ++ ALS A R V D TY+ AL+ C
Sbjct: 58 LLDEMPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALD 117
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G +H+++V GL + +++ N++ +MY+R G + EARRVFD +D VSWNA+LSG
Sbjct: 118 VRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSG 177
Query: 133 YTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASAC---------GHEKNLELGKQIH 182
Y + G E L + +M R GL + + S C G + + +H
Sbjct: 178 YVRAG--AREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVH 235
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNREDA-- 239
G +K G + + + ++ Y+K +A +F+ + D NVI MI+ RE+A
Sbjct: 236 GCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAAD 295
Query: 240 -----VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+ L+ E++ G+ P++ +F ++ A ++ G+ IHG +K +F + + +
Sbjct: 296 VAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGS 355
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI +Y+ M+D + F L ++++ W ++ISG QN L A++ F ++ +P
Sbjct: 356 ALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRP 415
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ + SV+NA A + G++ +K G + +G++ + M + G + + R
Sbjct: 416 DVFAMSSVMNAC--ASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATR 473
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRNG 472
F E + + +W+A+IS+ A HG + F EM + K P+ ITFLS+LT C G
Sbjct: 474 RFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGG 533
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ +G + M +Y + P+ H +C+VD+LGR GRL +AE + V +SL
Sbjct: 534 LVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSL 593
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L +CRIHG++E G+ +AD +M +EP S SYV++ N+Y + G+ + R MK +GV+
Sbjct: 594 LASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKERGVK 653
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRE 643
KE G SW ++ G+H F +GD +HP S+ IYR + S++ ++S+ +
Sbjct: 654 KEPGLSWIELS--SGVHSFVAGDKSHPESKAIYRKVAEMVSKVAGISSREQ 702
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 229/468 (48%), Gaps = 37/468 (7%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF------EKSDDALSFALRMNL----- 50
+MY + G+ +A +F+ D VSWN +LSG+ E++ + S R L
Sbjct: 145 SMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSF 204
Query: 51 -IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
+G + S++ + D G +H +VK GLD+++++ +A+I MY++ G L
Sbjct: 205 ALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALT 264
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQD--GDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
A +F +P+ + + NA+++G+ ++ D EA+ E+ +G++ SF+S
Sbjct: 265 NAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILR 324
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
AC GKQIHG +K + V +G+ L+ YS D + FR + ++V+
Sbjct: 325 ACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVI 384
Query: 228 WTTMIS---MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
WT++IS N E+A+ LF+E G+ P+ +++A + + + G I L +
Sbjct: 385 WTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAV 444
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K+ F ++ N I M AR + + + F E+ R+++SW+A+IS +A +G + A+
Sbjct: 445 KSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALC 504
Query: 343 AFFGVI--KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD-----PIVG 395
F ++ K + PN TF S+L A HG + G+ +D P +
Sbjct: 505 VFNEMLDAKVAPPNEITFLSILTAC--------SHGGLVDEGLRYYGIMNDEYGLSPTIK 556
Query: 396 --SALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ ++D+ G+ G + +++ ++ W +++++ HGD E
Sbjct: 557 HCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDME 604
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 179/345 (51%), Gaps = 19/345 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSD---DALSFALRMNLIGVV 54
++MY K G A+ +F ++ +P+++ N +++GF E +D +AL + G+
Sbjct: 254 IDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQ 313
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
++S+ L C F FG Q+H ++K +VY+G+ALI +YS G + + R
Sbjct: 314 PSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRC 373
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F +P +D V W +++SG Q+ + EA+ E +R GLR D + +S +AC
Sbjct: 374 FRSLPKQDVVIWTSVISGCVQNELFE-EALRLFQESVRCGLRPDVFAMSSVMNACASLAV 432
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
G+QI +++K G+ ++GN + ++ A + F+ M R+V+SW+ +IS
Sbjct: 433 ARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISS 492
Query: 235 N-----REDAVSLFKEMRLDG--VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ DA+ +F EM LD PN++TF+ ++ A S G LV EG +G+ + +
Sbjct: 493 HAHHGCARDALCVFNEM-LDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGI-MNDEYG 550
Query: 288 SEPSV--CNCLITMYARFESMQDSEK-VFDELSCREIISWNALIS 329
P++ C C++ + R + D+E + D + + W +L++
Sbjct: 551 LSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLA 595
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 199/694 (28%), Positives = 332/694 (47%), Gaps = 121/694 (17%)
Query: 57 AVTYSTALSFCLD--HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
A Y+ L CL +H I+ FG ++ N LI +Y + L AR++
Sbjct: 12 ANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQL 71
Query: 115 FDEM--PNK-------------------------------DSVSWNAILSGYTQDGDYGV 141
FDE+ P+K D+V +NA+++G++ + D G
Sbjct: 72 FDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNND-GY 130
Query: 142 EAILALIEMMRKGLRLDHVSFTSA----ASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
AI +M +G + D ++ S A EK Q H ++K G G SV
Sbjct: 131 SAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQC---VQFHAAALKSGAGYVTSVS 187
Query: 198 NVLMSTYSKC----EVTGDANKVFRRMHDRNVISWTTMIS---------MNRE------- 237
N L+S YS+C + A KVF + +++ SWTTM++ + +E
Sbjct: 188 NALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDE 247
Query: 238 ---------------------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
+A+ + + M G+ ++ T+ +I A + L++ G+
Sbjct: 248 NMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQ 307
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY----- 331
+H ++ S N L+T+Y + ++ +F+++ ++++SWNAL+SGY
Sbjct: 308 VHAYVLRREDFSF-HFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 332 --------------------------AQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
A+NG ++ F + +E +P Y F + +
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+ +GQ+ H+ ++K+G DS G+AL+ MY K G + E+Q+VF
Sbjct: 427 CAVLG--AYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSV 484
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+W A+I+AL +HG ++ ++EM KG+RPD ITFL+VLT C G++ +GR F+SM
Sbjct: 485 SWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSM 544
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
Y I P DHY+ ++D+L R G+ EAE ++ +P P + ++LL CR+HGN+E+
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMEL 604
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
G AD L + P G+Y+L+SN+YA G WE VA +RK M+ +GV+KEV SW ++
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEME- 663
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+H F D +HP +E +Y+ + LG EM+ L
Sbjct: 664 -TQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRL 696
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 151/557 (27%), Positives = 248/557 (44%), Gaps = 126/557 (22%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD-ALSFALRMNLIGVVFDAVT 59
+++YCKS + D A +F+ ++ PD ++ T++SG+ S D AL+ ++ + D V
Sbjct: 56 IDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVM 115
Query: 60 YSTALS--------------FC-LDHEGF----------LFGL-----------QLHSLI 83
Y+ ++ FC + HEGF L GL Q H+
Sbjct: 116 YNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAA 175
Query: 84 VKFGLDSEVYVGNALITMYSRWGR----LVEARRVFDEMPNKDSVSWNAILSGYTQDG-- 137
+K G V NAL+++YSR L AR+VFD++P KD SW +++GY ++G
Sbjct: 176 LKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCF 235
Query: 138 DYGVEAILAL-------------------------IEMMRK----GLRLDHVSFTSAASA 168
D G E + + +EM+R+ G+ LD ++ S A
Sbjct: 236 DLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRA 295
Query: 169 CGHEKNLELGKQIHGVSI-------------------------------KMGYGTHVSVG 197
C + + L+LGKQ+H + KM VS
Sbjct: 296 CANARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVS-W 354
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVC 252
N L+S Y G+A +F+ M ++N++SW MIS E+ + LF M+ +G
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P D F G I + ++ G+ H +K F S S N LITMYA+ ++++++V
Sbjct: 415 PCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQV 474
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA--E 369
F + C + +SWNALI+ Q+G + AV + ++K+ +P+ TF +VL A A
Sbjct: 475 FRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLV 534
Query: 370 DISLKHGQRCHS-HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV-----FNETQEKSE 423
D K+ + + I G D + L+D+ + G E++ + F T E
Sbjct: 535 DQGRKYFNSMETVYRIPPGADH----YARLIDLLCRSGKFSEAESIIESLPFKPTAE--- 587
Query: 424 FAWTAIISALARHGDYE 440
W A++S HG+ E
Sbjct: 588 -IWEALLSGCRVHGNME 603
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 199/419 (47%), Gaps = 51/419 (12%)
Query: 1 MNMYCKSGQFDKALCIFNNLN-NPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
M Y K+G FD + ++ N +V++N ++SG+ +AL RM G+ D
Sbjct: 226 MTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELD 285
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
TY + + C + G Q+H+ +++ D + N+L+T+Y + G+ EAR +F+
Sbjct: 286 EFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIFE 344
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--------------------GLR 156
+MP KD VSWNA+LSGY G G EA L EM K GL+
Sbjct: 345 KMPAKDLVSWNALLSGYVSSGHIG-EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 157 L------------DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTY 204
L D+ +F+ A +C G+Q H +K+G+ + +S GN L++ Y
Sbjct: 404 LFSCMKREGFEPCDY-AFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMY 462
Query: 205 SKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFI 259
+KC V +A +VFR M + +SW +I+ + +AV +++EM G+ P+ +TF+
Sbjct: 463 AKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFL 522
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC--LITMYARFESMQDSEKVFDELS 317
++ A S LV +GR ++T + P + LI + R ++E + + L
Sbjct: 523 TVLTACSHAGLVDQGRKYFN-SMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLP 581
Query: 318 CREIIS-WNALISGYAQNG---LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDIS 372
+ W AL+SG +G L + A FG+I E ++ A G E+++
Sbjct: 582 FKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVA 640
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 190/584 (32%), Positives = 309/584 (52%), Gaps = 23/584 (3%)
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
+L F + H+ Q HS I+ GL ++ LI Y+ +R VFD + +K+
Sbjct: 29 SLHFSVTHKSLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKN 88
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
WN++++G ++ Y EA +M + D + ++ + L GK IH
Sbjct: 89 VFLWNSLINGCVKNRLYN-EAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIH 147
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--------M 234
G SI+ G+ + V N +MS Y KC ++ KVF M RN SW +I+
Sbjct: 148 GKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCN 207
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK--EGRMIHGLCIKTNFL----S 288
RE+ K+M++D V P+ T L+ + G++ K GR +H +K + S
Sbjct: 208 FREETWEFVKQMQMDEVRPDAYTISSLL-PLCDGDMGKWDYGRELHCYIVKNELVLGLDS 266
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FG 346
+ + CLI MY+R + +VFD + CR + SW A+I+GY +NG S A+ F
Sbjct: 267 DVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQ 326
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
VI +PN + SVL A + L G++ H ++ L+++ + +AL+DMY K G
Sbjct: 327 VIDGVEPNRVSLVSVLPACSSFS--GLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCG 384
Query: 407 SIFESQRVF-NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
S+ ++RVF +++ K +W+++IS HG + + + +M G+RPD IT + +L
Sbjct: 385 SLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGIL 444
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ CGR+G++++G +++ S++ DY IEP+ + +C+VDMLGR G+L+ A + + IP PG
Sbjct: 445 SACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPG 504
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
SV +L+ IHG++EM E L+++EP +YV +SNLYA W+ VA +R+
Sbjct: 505 PSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAEVRRM 564
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
MK K +RK G SW + + H F D HP S IY M +
Sbjct: 565 MKDKRLRKVPGCSWISIN--NKTHCFYVADKAHPSSTSIYNMLD 606
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 236/446 (52%), Gaps = 24/446 (5%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F++L + ++ WN++++G K+ ++A +M V+ D T ST LS G
Sbjct: 80 VFDSLQHKNVFLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLST-LSKVSSELG 138
Query: 73 FLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
LF G +H ++ G S+ V N++++MY + G E+R+VFDEM ++S SWN +++
Sbjct: 139 ALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIA 198
Query: 132 GYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASAC-GHEKNLELGKQIHGVSIK- 187
GY G ++ E + +M +R D + +S C G + G+++H +K
Sbjct: 199 GYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKN 258
Query: 188 ---MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDA 239
+G + V +G L+ YS+ +VF RM RNV SWT MI + + ++A
Sbjct: 259 ELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEA 318
Query: 240 VSLFKEMR-LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
+SLF++M+ +DGV PN V+ + ++ A S + + GR IHG ++ +E S+CN LI
Sbjct: 319 LSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALID 378
Query: 299 MYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
MY++ S+ + +VF++ S C++ ISW+++ISGY +G A+ + +++ +P+
Sbjct: 379 MYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMI 438
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
T +L+A G + ++ G +S +I G++ + + ++DM G+ G + +
Sbjct: 439 TTVGILSACGRSGLVN--EGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFI 496
Query: 416 NETQ-EKSEFAWTAIISALARHGDYE 440
E W A++S HGD E
Sbjct: 497 KAIPVEPGPSVWGALVSCSIIHGDLE 522
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 196/391 (50%), Gaps = 25/391 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS------DDALSFALRMNLIGVV 54
M+MYCK G FD++ +F+ + + SWN +++G+ S ++ F +M + V
Sbjct: 166 MSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVR 225
Query: 55 FDAVTYSTALSFCLDHEG-FLFGLQLHSLIVK----FGLDSEVYVGNALITMYSRWGRLV 109
DA T S+ L C G + +G +LH IVK GLDS+V++G LI MYSR ++V
Sbjct: 226 PDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVV 285
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR--KGLRLDHVSFTSAAS 167
RRVFD M ++ SW A+++GY ++GD + L+L M+ G+ + VS S
Sbjct: 286 VGRRVFDRMKCRNVFSWTAMINGYVENGD--SDEALSLFRDMQVIDGVEPNRVSLVSVLP 343
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVI 226
AC L G+QIHG +++ VS+ N L+ YSKC A +VF ++ I
Sbjct: 344 ACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAI 403
Query: 227 SWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
SW++MIS ++A+ L+ +M G+ P+ +T +G++ A LV EG I+
Sbjct: 404 SWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLNIYSSV 463
Query: 282 IKTNFLSEPS--VCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNGLSL 338
I ++ EP+ +C C++ M R + + + S W AL+S +G
Sbjct: 464 I-NDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSIIHGDLE 522
Query: 339 AAVQAFFGVIKESKPNAYTFGSVLNAVGAAE 369
A+ +I+ N + S+ N ++
Sbjct: 523 MQELAYRFLIQLEPKNPSNYVSISNLYASSR 553
>gi|359492768|ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 319/619 (51%), Gaps = 54/619 (8%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYS---------------- 103
YS + C + + +H+ ++K G ++ ++GN + +YS
Sbjct: 40 YSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDII 99
Query: 104 ---------------RWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
R+G L AR VFDEMP +D VSWN ++SGY G + +A
Sbjct: 100 DKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFD-DAFRFFS 158
Query: 149 EMMRKGLRLDHVSFTS----AASACGHEKNLELGKQIHGVSIKMGYG-THVSVGNVLMST 203
EM + G+R ++++ +SAC GKQIH I+ G ++V VGN L+
Sbjct: 159 EMQKAGIRPSGFTYSTLLSFVSSACR-------GKQIHASMIRNGVDLSNVVVGNSLIGM 211
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTF 258
Y K V A VF M + ++ SW ++I S + A+ F MR G P+ T
Sbjct: 212 YGKFGVVDYAFGVFITMEELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTV 271
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC 318
+I S +++G I LCI+ FLS V + I ++++ ++DS +VF+E+
Sbjct: 272 STVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQ 331
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQ 377
+ + NA+IS YA +G A+Q F ++E+ +P +T VL+AV + + G
Sbjct: 332 WDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSIL--LPVDQGS 389
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
+ HS ++K GL+SD IV S+L++MY K G I + + F + + +W +I LA +G
Sbjct: 390 QIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNG 449
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
+ FKE+ G PD IT VL C G++ +G +F SM K+Y + P+ +HY
Sbjct: 450 RVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHY 509
Query: 498 SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
+C+VDM+ R G+L+EA ++V +P P + SLL AC I+G++ ER+A+ +M++EP
Sbjct: 510 ACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEP 569
Query: 558 AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNT 617
S Y++++ Y +G WE + +R+ MK KGVRK +G SW +G + + F
Sbjct: 570 QSSLPYLVLAQAYEMRGRWESLVRVRRAMKEKGVRKVIGCSW--IGIKNHVFVFKENQLL 627
Query: 618 HPRSEEIYRMAECLGSEMK 636
H ++IY + L E++
Sbjct: 628 HIGGKDIYFILRLLIQEIE 646
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 230/473 (48%), Gaps = 25/473 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
+ + + G+ ++A +F+ + D+VSWNT++SG F DDA F M G+
Sbjct: 110 LKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSG 169
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD-SEVYVGNALITMYSRWGRLVEARRVFD 116
TYST LSF G Q+H+ +++ G+D S V VGN+LI MY ++G + A VF
Sbjct: 170 FTYSTLLSFV---SSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFI 226
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M D SWN+++ + G Y A+ + M G D + ++ + C + ++LE
Sbjct: 227 TMEELDITSWNSLIWSCGKSG-YQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLE 285
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+QI + I++G+ ++ V + + +SKC D+ +VF ++ + + MIS
Sbjct: 286 KGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYA 345
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E+A+ LF + + P + T ++ A+SI V +G IH L +K+ S+
Sbjct: 346 WHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVI 405
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKE 350
V + L+ MYA+F + + K F ++ R++ISWN +I G A NG A++ F +I
Sbjct: 406 VASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGG 465
Query: 351 SKPNAYTFGSVLNA--VGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGS 407
P+ T VL A VG D G S + K G+ + ++DM + G
Sbjct: 466 PPPDEITLAGVLLACNVGGLVD----EGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGK 521
Query: 408 IFESQRVFN-ETQEKSEFAWTAIISALARHGDY---ESVMNQFKEMENKGVRP 456
+ E+ + E S W +++ A +GD E V + E+E + P
Sbjct: 522 LKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLP 574
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 204/676 (30%), Positives = 351/676 (51%), Gaps = 58/676 (8%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y K + D A +F+ + +VSWNT++S + K +AL M+ + T+
Sbjct: 82 YAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTF 141
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD---- 116
S+ LS C G +H L++K G +S VG+AL+ Y+ + EARRVFD
Sbjct: 142 SSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVR 201
Query: 117 ---------------------------EMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
+MP +D V+W ++SG++++GD +A+
Sbjct: 202 RNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRL 261
Query: 150 MMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
MMR G + +F ACG L +G+ +HG+ +K G S+G L+ Y +CE
Sbjct: 262 MMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECE 321
Query: 209 VTGDANKVFRRMHDRNVISWTTMI----SMNR-EDAVSLFKEMRLDGVCP-NDVTFIGLI 262
DA +V + + + + + ++I SM R EDA E+ +G+ N V++ +I
Sbjct: 322 AIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDA-----ELVFNGMTEMNPVSYNLMI 376
Query: 263 HAISIGNLVKEG-RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC-RE 320
++G + + R+ + +T F S N +I++Y+R + + ++F+E ++
Sbjct: 377 KGYAVGGQMDDSKRLFEKMPCRTIFSS-----NTMISVYSRNGEIDKALELFEETKNEKD 431
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRC 379
++WN++ISGY +G A++ + + + S + TF ++ +A SL+ GQ
Sbjct: 432 PVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLG--SLQQGQLL 489
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+H+IK +S+ VG++L+DMY K GSI E+Q F + AWTA+I+ A HG
Sbjct: 490 HAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLG 549
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC 499
++ F M +G+ P+ TF+ VL+ C R G++++G +F SM + Y + P+ +HY+C
Sbjct: 550 SEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYAC 609
Query: 500 MVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+VD+LGR G + EAEE + ++P V +LL AC ++E+GER+A+ + +P
Sbjct: 610 VVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKP 669
Query: 560 SGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHP 619
SYV++SN+YA G W ++RK ++ V+K+ G SW ++ + +H FS D +HP
Sbjct: 670 ISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELN--NKIHVFSIEDRSHP 727
Query: 620 RSEEIYRMAECLGSEM 635
IY E L + +
Sbjct: 728 YCNMIYATLEHLTANI 743
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 219/490 (44%), Gaps = 51/490 (10%)
Query: 90 SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
SE+ N I+ Y++ +L AR++FD+MP + VSWN ++S Y++ G + EA+ +
Sbjct: 70 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFS-EALFLVYS 128
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M R ++L +F+S S C + L GK IH + +K G + VG+ L+ Y+ C
Sbjct: 129 MHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFE 188
Query: 210 TGDANKVF----RR---------------------------MHDRNVISWTTMISMNRED 238
G+A +VF RR M R+V++WTT+IS ++
Sbjct: 189 IGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKN 248
Query: 239 ------AVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
A+ +F+ M G PN+ TF ++ A ++ GR +HGL +K +PS
Sbjct: 249 GDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPS 308
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ L+ Y E++ D+ +V + + + N+LI G G + + F + E
Sbjct: 309 IGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMG-RIEDAELVFNGMTEM 367
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P +Y AVG D S + ++ I + ++ +Y + G I ++
Sbjct: 368 NPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTI--------FSSNTMISVYSRNGEIDKA 419
Query: 412 QRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+F ET+ EK W ++IS G E + + M ++ TF ++ C
Sbjct: 420 LELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSC 479
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G + +G+ L ++K E + + ++DM + G + EA+ I P ++
Sbjct: 480 LGSLQQGQLLHAHLIKT-PFESNVYVGTSLIDMYSKCGSIMEAQTSFVSI-FSPNVAAWT 537
Query: 531 SLLGACRIHG 540
+L+ HG
Sbjct: 538 ALINGHAYHG 547
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 145/323 (44%), Gaps = 41/323 (12%)
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
LSE N I+ YA+ + + ++FD++ R ++SWN +IS Y+++G A+ +
Sbjct: 69 LSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYS 128
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ + K + TF SVL+ A L+ G+ H ++K G +S +VGSALL Y
Sbjct: 129 MHRSHMKLSESTFSSVLSV--CARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASC 186
Query: 406 GSIFESQRVFNETQEKSE-------------------------------FAWTAIISALA 434
I E++RVF+ ++E AWT +IS +
Sbjct: 187 FEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFS 246
Query: 435 RHGD-YESVMNQFKEMENKG-VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
++GD + F+ M G P+ TF V+ CGR G++ GR + ++K +E
Sbjct: 247 KNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMK-CGLEY 305
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
P +V+ +++A + + P L+ L SL+ G +E E + + +
Sbjct: 306 DPSIGGALVEFYCECEAIDDALRVCKGVV-NPCLNALNSLIEGLISMGRIEDAELVFNGM 364
Query: 553 MKMEPAGSGSYVLMSNLYAEKGD 575
+M P SY LM YA G
Sbjct: 365 TEMNPV---SYNLMIKGYAVGGQ 384
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN-PDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
+++Y ++G+ DKAL +F N D V+WN+++SG+ S ++AL + M+ + +
Sbjct: 407 ISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQT 466
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+S C G LH+ ++K +S VYVG +LI MYS+ G ++EA+ F
Sbjct: 467 RSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFV 526
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ + + +W A+++G+ G G EAI M+ +GL + +F SAC +
Sbjct: 527 SIFSPNVAAWTALINGHAYHG-LGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVN 585
Query: 177 LGKQI 181
G +I
Sbjct: 586 EGMKI 590
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 309/581 (53%), Gaps = 24/581 (4%)
Query: 54 VFDAVTYSTA-LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
+ + VT A L C DH+ G QLHSL++ +G +LI MYS+ G++ EA
Sbjct: 7 MLNNVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAI 66
Query: 113 RVF-DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
VF D ++ ++NAI+SG+ +G + +M +G+ D +F C
Sbjct: 67 LVFYDPCHERNVFAYNAIISGFVSNG-LASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCE 125
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+ K+IHG +KMG V VG+ L++TY K DA KVF + R+V+ W M
Sbjct: 126 VMEV---KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAM 182
Query: 232 ISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
I+ ++A+ +F+ M + GV P+ T G++ + + G+ +HG+ +K +
Sbjct: 183 INGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGY 242
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S SV N LI MY + + + D+ +F+ ++ ++I SWN++IS + Q G ++ F
Sbjct: 243 DSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDK 302
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP--------IVGSA 397
++ P+ T +VL A + +L HG+ H ++I GL D +V +A
Sbjct: 303 MLGSGILPDLVTITTVLPA--CSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNA 360
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
++DMY K GS+ + ++F+ +K +W +I HG + F +M +P+
Sbjct: 361 VMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPN 420
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
+T + VL+ C G + GR M + + P+ +HY+C++DMLGR G LE+A E+V
Sbjct: 421 EVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIV 480
Query: 518 GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
++P V ++LLGACR+HGN E+ E A ++++EP GSYVLMSN+Y G +E
Sbjct: 481 QKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYE 540
Query: 578 MVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTH 618
V +RK MK + V+K G SW ++ DG+H F +GD TH
Sbjct: 541 EVLEVRKTMKEQNVKKTPGCSWIELK--DGVHVFRTGDRTH 579
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 241/465 (51%), Gaps = 36/465 (7%)
Query: 1 MNMYCKSGQFDKALCIF-NNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFD 56
+NMY K GQ +A+ +F + + ++ ++N ++SGF + F +M L GV+ D
Sbjct: 53 INMYSKCGQMGEAILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPD 112
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ + C + + ++H ++K GL+ +V+VG+AL+ Y + G + +A++VF
Sbjct: 113 KYTFPCVVRTCCE---VMEVKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFG 169
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E+ +D V WNA+++GY + G EA+ M KG+ + T S +L+
Sbjct: 170 ELSIRDVVLWNAMINGYAKIGCLD-EALEVFRRMHVKGVAPSRFTITGILSVFASRGDLD 228
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
GK +HG+ +KMGY + VSV N L+ Y KC+ GDA +F ++++++ SW ++IS+
Sbjct: 229 NGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHE 288
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI--------K 283
+ + + LF +M G+ P+ VT ++ A S + GR IHG I +
Sbjct: 289 QCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDE 348
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ V N ++ MYA+ SM ++ K+FD +S +++ SWN +I GY +G +L A+
Sbjct: 349 NGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGM 408
Query: 344 FFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD----PIVG--S 396
F + + E KPN T VL+A A +S H + ++S P + +
Sbjct: 409 FSQMCEAEFKPNEVTLVGVLSACNHAGFVS-------HGRLFLAQMESTFGVIPTIEHYT 461
Query: 397 ALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
++DM G+ G + ++ + + + + W A++ A HG+ E
Sbjct: 462 CVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAE 506
>gi|224130346|ref|XP_002328586.1| predicted protein [Populus trichocarpa]
gi|222838568|gb|EEE76933.1| predicted protein [Populus trichocarpa]
Length = 699
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 192/616 (31%), Positives = 331/616 (53%), Gaps = 14/616 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y KSG A +F+ ++ D+V++N ++SG K AL + M +G+
Sbjct: 66 LDSYIKSGNVTLAQKLFDEMSMCDVVTYNLMVSGLGKYGIPKQALYYYYEMVSLGIKESP 125
Query: 58 VTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+S+ LS C +GFL G+Q+H I+K G S +++ +L+ Y + G +FD
Sbjct: 126 STFSSVLSICSSQDGFLRQGIQVHCRIIKLGCGSNLFIRTSLVGFYMQMGCFDLGFSLFD 185
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
EMP ++ +WN +L G+ + G + E + EM G+ + +SF C +EK
Sbjct: 186 EMPERNLATWNLVLRGFCELGRFH-ELLSVYHEMKLDGVHPNGLSFCYLIRGCCNEKFFY 244
Query: 177 LGKQIHGVSIKMGYG-THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
GKQ+H IK+G+ +++ V N L+ YS C+ DA K F + +VISW +++S+
Sbjct: 245 EGKQLHCHIIKVGWARSNIFVANALVDFYSACKSLNDARKSFESIKVEDVISWNSIVSVY 304
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF-LSE 289
+ +AV LF M+ G P+ +F+ L+H S+ + G+ IH +K F +
Sbjct: 305 ADCGLLFEAVELFYLMQFWGK-PSIRSFVALLHLSSLNGNILFGKQIHCCVLKMGFDIGS 363
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + LI MY + ++ S F+ + + N+L++ G+ V+ + ++
Sbjct: 364 FHVQSALIDMYGKCRYIESSVSAFESVPKKTTQICNSLMTSLLHCGIVYDVVEMYGLMVD 423
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E + TF + L A+ +E S+ + H +K+G SD V +L+D Y + G +
Sbjct: 424 EGIGLDEVTFSTTLKALSVSEFASMDSCRLVHCCAMKLGFGSDIAVSCSLIDAYSRCGHV 483
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S++VF + + +T+II+ LA++G + F+ M KG+ PD +TFL VLT C
Sbjct: 484 QLSKKVFEQLPSPNVICFTSIINGLAQNGLGRECLQTFEAMIRKGLEPDKVTFLCVLTGC 543
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G+ +GR +F SM Y I P+ +H+SCMVD+LGR G L+EAEEL + PG +
Sbjct: 544 SHSGLFEEGRLIFYSMKAQYGICPAKEHFSCMVDILGRAGLLDEAEELTQKAPGRGDCVM 603
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
SLL +CRI+ N +G R A AL++++P Y+ +SN Y++ G++E +R+ +
Sbjct: 604 WTSLLRSCRIYRNEIVGRRAAKALLELDPEDFSVYLQVSNFYSDIGEYESSMHIRELAIA 663
Query: 589 KGVRKEVGFSWADVGD 604
+ + +E+G S+ +V +
Sbjct: 664 RKLTREIGRSFIEVNN 679
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 199/388 (51%), Gaps = 15/388 (3%)
Query: 88 LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGV--EAIL 145
++ +Y N + Y + G + A+++FDEM D V++N ++SG G YG+ +A+
Sbjct: 55 INDTIYAKNRTLDSYIKSGNVTLAQKLFDEMSMCDVVTYNLMVSGL---GKYGIPKQALY 111
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKN-LELGKQIHGVSIKMGYGTHVSVGNVLMSTY 204
EM+ G++ +F+S S C + L G Q+H IK+G G+++ + L+ Y
Sbjct: 112 YYYEMVSLGIKESPSTFSSVLSICSSQDGFLRQGIQVHCRIIKLGCGSNLFIRTSLVGFY 171
Query: 205 SKCEVTGDANKVFRRMHDRNVISWTTMI----SMNR-EDAVSLFKEMRLDGVCPNDVTFI 259
+ +F M +RN+ +W ++ + R + +S++ EM+LDGV PN ++F
Sbjct: 172 MQMGCFDLGFSLFDEMPERNLATWNLVLRGFCELGRFHELLSVYHEMKLDGVHPNGLSFC 231
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFL-SEPSVCNCLITMYARFESMQDSEKVFDELSC 318
LI EG+ +H IK + S V N L+ Y+ +S+ D+ K F+ +
Sbjct: 232 YLIRGCCNEKFFYEGKQLHCHIIKVGWARSNIFVANALVDFYSACKSLNDARKSFESIKV 291
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQR 378
++ISWN+++S YA GL AV+ F+ + KP+ +F ++L+ +I G++
Sbjct: 292 EDVISWNSIVSVYADCGLLFEAVELFYLMQFWGKPSIRSFVALLHLSSLNGNILF--GKQ 349
Query: 379 CHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
H ++K+G D V SAL+DMYGK I S F +K+ +++++L G
Sbjct: 350 IHCCVLKMGFDIGSFHVQSALIDMYGKCRYIESSVSAFESVPKKTTQICNSLMTSLLHCG 409
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVL 465
V+ + M ++G+ D +TF + L
Sbjct: 410 IVYDVVEMYGLMVDEGIGLDEVTFSTTL 437
>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 993
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 192/621 (30%), Positives = 320/621 (51%), Gaps = 16/621 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + D +SWN ++S + E M V D T + +S C +
Sbjct: 202 LFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDL 261
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G +HSL V GL V + NAL+ MYS G+L EA +F M +D +SWN ++S
Sbjct: 262 VALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISS 321
Query: 133 YTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
Y Q + VEA+ L ++++ + ++F+SA AC + L G+ IH + ++
Sbjct: 322 YVQ-SNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQ 380
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEM 246
+ +GN L++ YSKC D +VF M +V+S + + +A+ +F M
Sbjct: 381 NVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWM 440
Query: 247 RLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
R G+ PN +T I L S+G+L G +H +T LS+ + N LITMYA
Sbjct: 441 RGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGD 500
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNA 364
++ S +F ++ + +ISWNA+I+ ++G A++ F +K + + L++
Sbjct: 501 LESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSS 560
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+A SL+ G + H +K GLD D V +A +DMYGK G + + + +
Sbjct: 561 --SANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQ 618
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W +IS AR+G ++ + FK M + G +PD +TF+++L+ C G+I KG ++SM
Sbjct: 619 CWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSM 678
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+ + P H C+VD+LGR+G+ EAE+ + ++P P + +SLL + R H N+++
Sbjct: 679 APTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDI 738
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
G + A L++++P +YVL+SNLYA W V LR MK+ + K SW +
Sbjct: 739 GRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLK- 797
Query: 605 IDGLHGFSSGDNTHPRSEEIY 625
+ + F GD +H +E+IY
Sbjct: 798 -NEVSTFGIGDRSHMHAEKIY 817
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 163/595 (27%), Positives = 273/595 (45%), Gaps = 59/595 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y G A +F + ++VSW ++ + ++AL RM GV+ +A
Sbjct: 86 LHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNA 145
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T +S C E + GLQ+ + +V GL + V V N+LITM+ R+ +A R+FD
Sbjct: 146 NALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDR 205
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D +SWNA++S Y+ + Y + + L +M ++ D + S S C + L
Sbjct: 206 MEERDRISWNAMISMYSHEEVYS-KCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVAL 264
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
G IH + + G V + N L++ YS +A +FR M R+VISW TMIS
Sbjct: 265 GSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQ 324
Query: 236 ----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E +L + ++ D PN +TF + A S + GR IH + ++ + +
Sbjct: 325 SNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLL 384
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ N L+TMY++ SM+D+E+VF+ + C +++S N L GYA +A F ++ +
Sbjct: 385 IGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALE-DVANAMRVFSWMRGT 443
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KPN T ++ + D+ +G H+++ + GL SD + ++L+ MY G +
Sbjct: 444 GIKPNYITMINLQGTCKSLGDLH-SYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLE 502
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
S +F+ KS +W AII+A RHG E + F + ++ G + D L+
Sbjct: 503 SSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSA 562
Query: 470 RNGMIHKGRHL----------------------------FDSMLKDYHIEPSPDH----- 496
+ +G L D MLK P P H
Sbjct: 563 NLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTL---PDPAHRPTQC 619
Query: 497 YSCMVDMLGRVGRLEEAEEL------VGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
++ ++ R G +EAE+ VGQ P +LL AC G ++ G
Sbjct: 620 WNTLISGYARYGYFKEAEDTFKHMVSVGQ---KPDYVTFVALLSACSHAGLIDKG 671
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 153/554 (27%), Positives = 264/554 (47%), Gaps = 34/554 (6%)
Query: 27 SWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTYSTALSFCLDH----EGFLFGLQL 79
SW T +SG + A + M V ++ ++ C +H EG G +
Sbjct: 8 SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTAC-EHRGWQEGAACGAAI 66
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H+L + GL VY+G AL+ +Y G ++ A+R+F EMP ++ VSW AI+ + +G
Sbjct: 67 HALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCM 126
Query: 140 GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
EA++A M ++G+ + + + S CG ++ G Q+ + G THVSV N
Sbjct: 127 E-EALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANS 185
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFKEMRLDGVCPN 254
L++ + DA ++F RM +R+ ISW MISM + V + +MR V P+
Sbjct: 186 LITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPD 245
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
T L+ + +LV G IH LC+ + + N L+ MY+ + ++E +F
Sbjct: 246 VTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFR 305
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDIS 372
+S R++ISWN +IS Y Q+ + A++ +++ E PN+ TF S L A + E +
Sbjct: 306 NMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE--A 363
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L +G+ H+ I++ L + ++G++LL MY K S+ +++RVF + +
Sbjct: 364 LMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGG 423
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK---GRHLFDS---MLK 486
A D + M F M G++P+ IT +++ C G +H H + + +L
Sbjct: 424 YAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLS 483
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
D +I S ++ M G LE + + +I +S +++ A HG GE
Sbjct: 484 DEYITNS------LITMYATCGDLESSTGIFSRINNKSVIS-WNAIIAANVRHGR---GE 533
Query: 547 RIADALMKMEPAGS 560
M + AG+
Sbjct: 534 EAIKLFMDSQHAGN 547
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 196/420 (46%), Gaps = 26/420 (6%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAI-LALIEMMR-KGLRLDHVSFTSAASACGH---E 172
MP++ S SW +SG + G+E+ L+ +MR + + L + S +AC H +
Sbjct: 1 MPHRTSSSWYTAVSGCAR---CGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQ 57
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT-M 231
+ G IH ++ + G +V +G L+ Y + +A ++F M RNV+SWT M
Sbjct: 58 EGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIM 117
Query: 232 ISMNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
++++ E+A+ ++ MR +GV N ++ G + + + L
Sbjct: 118 VALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLL 177
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ SV N LITM+ +QD+E++FD + R+ ISWNA+IS Y+ + F V
Sbjct: 178 THVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEV----YSKCFIV 233
Query: 348 IK-----ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
+ E KP+ T S+++ +++ ++L G HS + GL + +AL++MY
Sbjct: 234 LSDMRHGEVKPDVTTLCSLVSVCASSDLVAL--GSGIHSLCVSSGLHCSVPLINALVNMY 291
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE-MENKGVRPDSITF 461
G + E++ +F + +W +IS+ + + + ++ P+S+TF
Sbjct: 292 STAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTF 351
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
S L C + GR + +M+ ++ + ++ M + +E+ E + +P
Sbjct: 352 SSALGACSSPEALMNGRTIH-AMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMP 410
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 204/676 (30%), Positives = 350/676 (51%), Gaps = 58/676 (8%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y K + D A +F+ + +VSWNT++S + K +AL M+ + T+
Sbjct: 42 YAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTF 101
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD---- 116
S+ LS C G +H L++K G +S VG+AL+ Y+ + EARRVFD
Sbjct: 102 SSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVR 161
Query: 117 ---------------------------EMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
+MP +D V+W ++SG++++GD +A+
Sbjct: 162 RNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRL 221
Query: 150 MMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
MMR G + +F ACG L +G+ +HG+ +K G S+G L+ Y +CE
Sbjct: 222 MMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECE 281
Query: 209 VTGDANKVFRRMHDRNVISWTTMI----SMNR-EDAVSLFKEMRLDGVCP-NDVTFIGLI 262
DA +V + + + + + ++I SM R EDA E+ +G+ N V++ +I
Sbjct: 282 AIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDA-----ELVFNGMTEMNPVSYNLMI 336
Query: 263 HAISIGNLVKEG-RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC-RE 320
++G + + R+ + +T F S N +I++Y+R + + ++F+E ++
Sbjct: 337 KGYAVGGQMDDSKRLFEKMPCRTIFSS-----NTMISVYSRNGEIDKALELFEETKNEKD 391
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRC 379
++WN++ISGY +G A++ + + + S + TF ++ +A SL GQ
Sbjct: 392 PVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLG--SLHQGQLL 449
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+H+IK +S+ VG++L+DMY K GSI E+Q F + AWTA+I+ A HG
Sbjct: 450 HAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLG 509
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC 499
++ F M +G+ P+ TF+ VL+ C R G++++G +F SM + Y + P+ +HY+C
Sbjct: 510 SEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYAC 569
Query: 500 MVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+VD+LGR G + EAEE + ++P V +LL AC ++E+GER+A+ + +P
Sbjct: 570 VVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKP 629
Query: 560 SGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHP 619
SYV++SN+YA G W ++RK ++ V+K+ G SW ++ + +H FS D +HP
Sbjct: 630 ISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELN--NKIHVFSIEDRSHP 687
Query: 620 RSEEIYRMAECLGSEM 635
IY E L + +
Sbjct: 688 YCNMIYATLEHLTANI 703
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 220/490 (44%), Gaps = 51/490 (10%)
Query: 90 SEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
SE+ N I+ Y++ +L AR++FD+MP + VSWN ++S Y++ G + EA+ +
Sbjct: 30 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFS-EALFLVYS 88
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M R ++L +F+S S C + L GK IH + +K G + VG+ L+ Y+ C
Sbjct: 89 MHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFE 148
Query: 210 TGDANKVF----RR---------------------------MHDRNVISWTTMISMNRED 238
G+A +VF RR M R+V++WTT+IS ++
Sbjct: 149 IGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKN 208
Query: 239 ------AVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
A+ +F+ M G PN+ TF ++ A ++ GR +HGL +K +PS
Sbjct: 209 GDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPS 268
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ L+ Y E++ D+ +V + + + N+LI G G + + F + E
Sbjct: 269 IGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMG-RIEDAELVFNGMTEM 327
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P +Y AVG D S + ++ I + ++ +Y + G I ++
Sbjct: 328 NPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTI--------FSSNTMISVYSRNGEIDKA 379
Query: 412 QRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+F ET+ EK W ++IS G E + + M ++ TF ++ C
Sbjct: 380 LELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSC 439
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G +H+G+ L ++K E + + ++DM + G + EA+ I P ++
Sbjct: 440 LGSLHQGQLLHAHLIKT-PFESNVYVGTSLIDMYSKCGSIMEAQTSFVSI-FSPNVAAWT 497
Query: 531 SLLGACRIHG 540
+L+ HG
Sbjct: 498 ALINGHAYHG 507
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 145/323 (44%), Gaps = 41/323 (12%)
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
LSE N I+ YA+ + + ++FD++ R ++SWN +IS Y+++G A+ +
Sbjct: 29 LSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYS 88
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ + K + TF SVL+ A L+ G+ H ++K G +S +VGSALL Y
Sbjct: 89 MHRSHMKLSESTFSSVLSV--CARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASC 146
Query: 406 GSIFESQRVFNETQEKSE-------------------------------FAWTAIISALA 434
I E++RVF+ ++E AWT +IS +
Sbjct: 147 FEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFS 206
Query: 435 RHGD-YESVMNQFKEMENKG-VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
++GD + F+ M G P+ TF V+ CGR G++ GR + ++K +E
Sbjct: 207 KNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMK-CGLEY 265
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
P +V+ +++A + + P L+ L SL+ G +E E + + +
Sbjct: 266 DPSIGGALVEFYCECEAIDDALRVCKGVV-NPCLNALNSLIEGLISMGRIEDAELVFNGM 324
Query: 553 MKMEPAGSGSYVLMSNLYAEKGD 575
+M P SY LM YA G
Sbjct: 325 TEMNPV---SYNLMIKGYAVGGQ 344
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN-PDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
+++Y ++G+ DKAL +F N D V+WN+++SG+ S ++AL + M+ + +
Sbjct: 367 ISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQT 426
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+S C G LH+ ++K +S VYVG +LI MYS+ G ++EA+ F
Sbjct: 427 QSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFV 486
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ + + +W A+++G+ G G EAI M+ +GL + +F SAC +
Sbjct: 487 SIFSPNVAAWTALINGHAYHG-LGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVN 545
Query: 177 LGKQI 181
G +I
Sbjct: 546 EGMKI 550
>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
Length = 963
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 196/620 (31%), Positives = 322/620 (51%), Gaps = 59/620 (9%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALS-FALRMNLIGVVFDAVT 59
+ + G D+A IF +L + V+ N ++ G K S++A+ F N I V +A T
Sbjct: 319 FARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTI--VVNADT 376
Query: 60 YSTALS----FCLDHEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRV 114
Y LS + + EG G + H +++ GL D ++ V N L+ MY++ G + A ++
Sbjct: 377 YVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKI 436
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F M D +SWN I+S Q+G L+L
Sbjct: 437 FQLMEATDRISWNTIISALDQNG-----------------LKL----------------- 462
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L G+Q+H ++K G SV NVL+ Y +C D KVF M D + +SW +M+ +
Sbjct: 463 LSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGV 522
Query: 235 NRE------DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ V +F M G+ PN VTF+ L+ A+S ++++ G+ H +K +
Sbjct: 523 MASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVLKHGVMD 582
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAFFGV 347
+ V N LI+ YA+ M E +F +S R + +SWN++ISGY NG A+ + +
Sbjct: 583 DNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWLM 642
Query: 348 IKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ + + TF +LNA + +L+ G H+ I+ L+SD +V SAL+DMY K G
Sbjct: 643 LHSGQIMDCCTFSIILNACASVA--ALERGMEMHAFGIRSHLESDVVVESALVDMYSKCG 700
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ + ++FN +++EF+W ++IS ARHG + F+EM PD +TF+SVL+
Sbjct: 701 RVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVTFVSVLS 760
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G++ +G F+ M+ D+ I P +HYSC++D+LGR G++++ +E + ++P P
Sbjct: 761 ACSHAGLVERGLEYFE-MMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPMKPNA 819
Query: 527 SVLQSLLGACRIHGN---VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
+ +++L ACR + +E+G L+++EP +YVL SN +A G WE A R
Sbjct: 820 LIWRTVLVACRQSKDGSKIELGREALRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKAR 879
Query: 584 KGMKSKGVRKEVGFSWADVG 603
GM+ V+KE G SW +G
Sbjct: 880 AGMRQATVKKEAGRSWTYLG 899
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 237/515 (46%), Gaps = 68/515 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF------EKSDDALSFALRMNLIGVV 54
+N Y K + A +F+ + + VSW +LSG+ E++ LR G
Sbjct: 102 VNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGITEEAFRVFRAMLREVEPGCR 161
Query: 55 FDAVTYSTALSFCLD--HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW--GRLVE 110
+ T+ T L C D + F Q+H L+ K S V NALI+MY G +
Sbjct: 162 PTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASNTTVCNALISMYGSCTVGPPIL 221
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL-----DHV--SFT 163
A+RVFD P +D ++WNA++S Y + GD V ++M R+ R+ +H S
Sbjct: 222 AQRVFDGTPIRDLITWNALMSVYAKKGDV-VSTFTLFMDMQREDSRIQLRPTEHTFGSLI 280
Query: 164 SAAS-ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD 222
+A S + G L+ Q+ +K G + + VG+ L+S +++ + +A +F + +
Sbjct: 281 TATSLSSGSSAVLD---QVFVSVLKSGCSSDLYVGSALVSAFARHGLIDEAKDIFLSLKE 337
Query: 223 RNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL----VKE 273
+N ++ +I E+AV +F R + + N T++ L+ AI+ ++ +++
Sbjct: 338 KNAVTLNGLIVGLVKQHCSEEAVKIFVGTR-NTIVVNADTYVVLLSAIAEYSIPEEGLRK 396
Query: 274 GRMIHGLCIKTNFLS-EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G+ HG ++T + +V N L+ MYA+ ++ + K+F + + ISWN +IS
Sbjct: 397 GKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQLMEATDRISWNTIISALD 456
Query: 333 QNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
QNGL L L GQ+ H +K GLD D
Sbjct: 457 QNGLKL----------------------------------LSAGQQVHCDAVKWGLDLDT 482
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA-RHGDYESVMNQFKEMEN 451
V + L+ MYG+ G++ + +VFN + E +W +++ +A + F M
Sbjct: 483 SVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMR 542
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
G+ P+ +TF+++L ++ G+ ++LK
Sbjct: 543 GGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVLK 577
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 193/380 (50%), Gaps = 23/380 (6%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG- 137
LH ++K GL+ ++++ N L+ Y++ RL A RVFDEMP +++VSW +LSGY G
Sbjct: 82 LHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGI 141
Query: 138 -DYGVEAILALIEMMRKGLRLDHVSFTSAASAC--GHEKNLELGKQIHGVSIKMGYGTHV 194
+ A++ + G R +F + AC G L Q+HG+ K Y ++
Sbjct: 142 TEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASNT 201
Query: 195 SVGNVLMSTYSKCEVTGD--ANKVFRRMHDRNVISWTTMISM--NREDAVS---LFKEMR 247
+V N L+S Y C V A +VF R++I+W ++S+ + D VS LF +M+
Sbjct: 202 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDMQ 261
Query: 248 LDG----VCPNDVTFIGLIHAISI---GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
+ + P + TF LI A S+ + V + + L K+ S+ V + L++ +
Sbjct: 262 REDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVL--KSGCSSDLYVGSALVSAF 319
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
AR + +++ +F L + ++ N LI G + S AV+ F G NA T+
Sbjct: 320 ARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIVVNADTYVV 379
Query: 361 VLNAVG--AAEDISLKHGQRCHSHIIKVGL-DSDPIVGSALLDMYGKRGSIFESQRVFNE 417
+L+A+ + + L+ G+ H H+++ GL D V + L++MY K G+I + ++F
Sbjct: 380 LLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQL 439
Query: 418 TQEKSEFAWTAIISALARHG 437
+ +W IISAL ++G
Sbjct: 440 MEATDRISWNTIISALDQNG 459
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 155/313 (49%), Gaps = 13/313 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRM--NLI--GVVFD 56
+ MY + G +FN++ + D VSWN+++ S +S + + N++ G++ +
Sbjct: 489 VKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMRGGLIPN 548
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT+ L+ G Q H+ ++K G+ + V NALI+ Y++ G + +F
Sbjct: 549 KVTFVNLLAALSPLSVLELGKQFHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFS 608
Query: 117 EMP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M +D+VSWN+++SGY +G Y EA+ + M+ G +D +F+ +AC L
Sbjct: 609 NMSGRRDAVSWNSMISGYIYNG-YLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVAAL 667
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
E G ++H I+ + V V + L+ YSKC A+K+F M RN SW +MIS
Sbjct: 668 ERGMEMHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGY 727
Query: 234 ----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ R+ A+ F+EM P+ VTF+ ++ A S LV+ G + L +
Sbjct: 728 ARHGLGRK-ALETFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQ 786
Query: 290 PSVCNCLITMYAR 302
+C+I + R
Sbjct: 787 IEHYSCVIDLLGR 799
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 173/363 (47%), Gaps = 31/363 (8%)
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN--- 235
+ +H IK G + + N L+++Y+K A++VF M RN +SWT ++S
Sbjct: 80 ENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQ 139
Query: 236 --REDAVSLFKEMRLD---GVCPNDVTFIGLIHAISIGNLVKEG--RMIHGLCIKTNFLS 288
E+A +F+ M + G P TF L+ A G + G +HGL KT + S
Sbjct: 140 GITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYAS 199
Query: 289 EPSVCNCLITMYARFESMQD--SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+VCN LI+MY +++VFD R++I+WNAL+S YA+ G ++ F
Sbjct: 200 NTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMD 259
Query: 347 VIKES-----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
+ +E +P +TFGS++ A + S Q S ++K G SD VGSAL+
Sbjct: 260 MQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVS-VLKSGCSSDLYVGSALVSA 318
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
+ + G I E++ +F +EK+ +I L + E + F N V ++ T+
Sbjct: 319 FARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIV-VNADTY 377
Query: 462 LSVLTVCGRNGM----IHKGR----HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ +L+ + + KG+ H+ + L D I S + +V+M + G ++ A
Sbjct: 378 VVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVS----NGLVNMYAKCGAIDSA 433
Query: 514 EEL 516
++
Sbjct: 434 SKI 436
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 167/375 (44%), Gaps = 19/375 (5%)
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
G+ +H IK + + N L+ YA+ + + +VFDE+ R +SW L
Sbjct: 73 GDAANSPENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCL 132
Query: 328 ISGYAQNGLSLAAVQAFFGVIKE----SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
+SGY G++ A + F +++E +P ++TFG++L A L + H +
Sbjct: 133 LSGYVLQGITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLL 192
Query: 384 IKVGLDSDPIVGSALLDMYGK--RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
K S+ V +AL+ MYG G +QRVF+ T + W A++S A+ GD S
Sbjct: 193 SKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVS 252
Query: 442 VMNQFKEMENKG----VRPDSITFLSVLTVCG-RNGMIHKGRHLFDSMLKDYHIEPSPDH 496
F +M+ + +RP TF S++T +G +F S+LK S D
Sbjct: 253 TFTLFMDMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKS---GCSSDL 309
Query: 497 Y--SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
Y S +V R G ++EA+++ + +++ ++G + H + E +I
Sbjct: 310 YVGSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCS-EEAVKIFVGTRN 368
Query: 555 MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSG 614
+ +YV++ + AE E LRKG ++ G G + + +GL +
Sbjct: 369 TIVVNADTYVVLLSAIAEYSIPE--EGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAK 426
Query: 615 DNTHPRSEEIYRMAE 629
+ +I+++ E
Sbjct: 427 CGAIDSASKIFQLME 441
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 310/570 (54%), Gaps = 16/570 (2%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
G+V D ++ ++ C + G +LH ++ G +++ + AL+ MY++ G L +A
Sbjct: 5 GIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDA 64
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+RVF+ M KD +W++I+S Y + G G A++ M+ +G+ + V+F A C
Sbjct: 65 KRVFEGMEIKDLFAWSSIISAYARAG-RGEMAVVLYRRMIAEGVEPNVVTFACALGGCAS 123
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
L G+ IH + + + L++ Y KC+ +A KVF M RNV S+T M
Sbjct: 124 VAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAM 183
Query: 232 ISM-----NREDAVSLFKEM-RLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKT 284
IS +A+ LF M +++ + PN TF ++ A+ +GNL K GR +H
Sbjct: 184 ISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEK-GRKVHRHLASR 242
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
F + V N L+TMY + S ++ KVFD ++ R +ISW ++I+ YAQ+G A+ F
Sbjct: 243 GFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLF 302
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ + +P+ +F S LNA +L G+ H +++ L S P + ++LL MY +
Sbjct: 303 KRM--DVEPSGVSFSSALNACALLG--ALDEGREIHHRVVEAHLAS-PQMETSLLSMYAR 357
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GS+ +++RVFN + + F+ A+I+A +HG + + ++ ME +G+ D ITF+SV
Sbjct: 358 CGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSV 417
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L C ++ R F S++ D+ + P +HY CMVD+LGR GRL +AEELV +P
Sbjct: 418 LVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQT 477
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+LL C+ HG++ GER A + ++ PA + YV +SN+YA ++ +RK
Sbjct: 478 DAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRK 537
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSG 614
M+ +GV V S+ ++ + LH F+SG
Sbjct: 538 EMEERGVTTPVAVSYIEID--NELHMFTSG 565
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 221/418 (52%), Gaps = 20/418 (4%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M +G+ D TS +AC + LE G+++H I G+ T + + L+ Y+KC
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 210 TGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
DA +VF M +++ +W+++IS E AV L++ M +GV PN VTF +
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+ + +GR IH + + + + + L+ MY + + M ++ KVF+ + R + S+
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180
Query: 325 NALISGYAQNGLSLAAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDI-SLKHGQRCHS 381
A+IS Y Q G A++ F ++ +PNAYTF ++L GA E + +L+ G++ H
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL---GAVEGLGNLEKGRKVHR 237
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
H+ G D++ +V +AL+ MYGK GS E+++VF+ ++ +WT++I+A A+HG+ +
Sbjct: 238 HLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQE 297
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+N FK M+ V P ++F S L C G + +GR + ++ + H+ SP + ++
Sbjct: 298 ALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVV-EAHL-ASPQMETSLL 352
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
M R G L++A + ++ S +++ A HG + RI +ME G
Sbjct: 353 SMYARCGSLDDARRVFNRMKTRDAFSC-NAMIAAFTQHGRKKQALRI---YRRMEQEG 406
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 237/453 (52%), Gaps = 25/453 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY K G D A +F + D+ +W++++S + ++ + A+ RM GV +
Sbjct: 52 LQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNV 111
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT++ AL C G G +H I+ + + + ++L+ MY + +VEAR+VF+
Sbjct: 112 VTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEG 171
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M ++ S+ A++S Y Q G++ EA+ M + + + + +F + A NLE
Sbjct: 172 MKARNVRSYTAMISAYVQAGEHA-EALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLE 230
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+++H G+ T+V V N L++ Y KC +A KVF M RNVISWT+MI+
Sbjct: 231 KGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYA 290
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N ++A++LFK M ++ P+ V+F ++A ++ + EGR IH ++ + L+ P
Sbjct: 291 QHGNPQEALNLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHHRVVEAH-LASPQ 346
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ L++MYAR S+ D+ +VF+ + R+ S NA+I+ + Q+G A++ + + +E
Sbjct: 347 METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEG 406
Query: 352 KP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD--PIVGSAL--LDMYGKRG 406
P + TF SVL A ++ C + +D P+V L +D+ G+ G
Sbjct: 407 IPADGITFVSVLVACSHTSLVA-----DCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSG 461
Query: 407 SIFESQRVFNETQEKSE-FAWTAIISALARHGD 438
+ +++ + +++ AW ++S RHGD
Sbjct: 462 RLGDAEELVETMPYQTDAVAWMTLLSGCKRHGD 494
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 278/476 (58%), Gaps = 13/476 (2%)
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C H L GK IH + + + + + N L++ Y+KC A K+F M R+V++W
Sbjct: 25 CTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTW 84
Query: 229 TTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNL-VKEGRMIHGLC 281
T +I+ +DA+ L EM G+ PN T L+ A S +G+ V +GR +HGLC
Sbjct: 85 TALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLC 144
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
++ + S V ++ MYAR +++++ +FD + + +SWNALI+GYA+ G A
Sbjct: 145 LRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAF 204
Query: 342 QAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
F +++E+ KP +T+ SVL A + SL+ G+ H+ +IK G VG+ LLD
Sbjct: 205 CLFSNMLRENVKPTHFTYSSVLCACASMG--SLEQGKWVHALMIKWGEKLVAFVGNTLLD 262
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K GSI ++++VF+ ++ +W ++++ ++HG + + +F+EM + P+ IT
Sbjct: 263 MYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDIT 322
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
FL VLT C G++ +GRH FD M+K Y++EP HY MVD+LGR G L+ A + + ++
Sbjct: 323 FLCVLTACSHAGLLDEGRHYFD-MMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEM 381
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVA 580
P P +V +LLGACR+H N+E+G A+ + +++ G++VL+ N+YA G W A
Sbjct: 382 PIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAA 441
Query: 581 ILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+RK MK GV+KE SW ++ + +H F + D+ HP+ EI+ M E + ++K
Sbjct: 442 KVRKMMKESGVKKEPACSWVEME--NEVHVFVADDDAHPQRREIHNMWEQISDKIK 495
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 207/389 (53%), Gaps = 14/389 (3%)
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
T L C G +H+L++ ++ + N L+ +Y++ G LV AR++FDEM ++
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS---AASACGHEKNLELG 178
D V+W A+++GY+Q D +A+L L EM+R GL+ + + S AAS G L+ G
Sbjct: 80 DVVTWTALITGYSQH-DRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQ-G 137
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----- 233
+Q+HG+ ++ GY ++V V ++ Y++C +A +F M +N +SW +I+
Sbjct: 138 RQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ A LF M + V P T+ ++ A + +++G+ +H L IK V
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N L+ MYA+ S++D++KVFD L+ R+++SWN++++GY+Q+GL A+Q F +++
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN TF VL A A L G+ + K ++ ++D+ G+ G + +
Sbjct: 318 PNDITFLCVLTACSHAG--LLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAI 375
Query: 413 RVFNETQEKSEFA-WTAIISALARHGDYE 440
+ +E K A W A++ A H + E
Sbjct: 376 QFISEMPIKPTAAVWGALLGACRMHKNME 404
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 179/339 (52%), Gaps = 12/339 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+N+Y K G A +F+ +++ D+V+W +++G+ + D DAL M IG+ +
Sbjct: 57 LNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQ 116
Query: 58 VTYSTALSFC--LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T ++ L + L G QLH L +++G DS VYV A++ MY+R L EA+ +F
Sbjct: 117 FTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIF 176
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D M +K+ VSWNA+++GY + G G +A M+R+ ++ H +++S AC +L
Sbjct: 177 DVMVSKNEVSWNALIAGYARKGQ-GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSL 235
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
E GK +H + IK G VGN L+ Y+K DA KVF R+ R+V+SW +M++
Sbjct: 236 EQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGY 295
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A+ F+EM + PND+TF+ ++ A S L+ EGR + K N +
Sbjct: 296 SQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQI 355
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALI 328
S ++ + R + + + E+ + + W AL+
Sbjct: 356 SHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALL 394
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 191/566 (33%), Positives = 307/566 (54%), Gaps = 14/566 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q++ ++ GL ++ I +G + A + F E+ D + WNAI+ GYTQ
Sbjct: 5 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64
Query: 138 DYGVEA-ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
V+A I ++M + + +F ACG +GKQIHG + K G+G++V V
Sbjct: 65 I--VDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFV 122
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGV 251
N L+S Y+K A VF ++HDR V+SWT++IS + +A+++FKEMR V
Sbjct: 123 QNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNV 182
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ + + ++ A + + +G+ IHGL K EP + L TMYA+ ++ +
Sbjct: 183 KPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARF 242
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAED 370
F+ + +I WNA+ISGYA NG A++ F +I K + ++ T S + + +A+
Sbjct: 243 FFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV--LASAQV 300
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
SL+ + +I K D V + L+DMY K GSI+ ++ VF+ +K W+ +I
Sbjct: 301 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 360
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
HG + + + EM+ GV P+ TF+ +LT C +G++ +G LF ++ D+ I
Sbjct: 361 MGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELF-HLMPDHGI 419
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIAD 550
EP HYSC+VD+LGR G L +A + + +P PG+SV +LL AC+IH V +GE A+
Sbjct: 420 EPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAE 479
Query: 551 ALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHG 610
L ++P +G YV +SNLYA W VA +R M KG+ K++G S ++ L
Sbjct: 480 QLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEIN--GNLET 537
Query: 611 FSSGDNTHPRSEEIYRMAECLGSEMK 636
F GD +HP+S+EI+ + L +K
Sbjct: 538 FQVGDRSHPKSKEIFEELDRLEKRLK 563
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 171/339 (50%), Gaps = 10/339 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K GQ A +F+ L++ +VSW +++SG+ ++ D AL+ M V D
Sbjct: 127 VSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDW 186
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + ++ + E G +H L+ K GL+ E + +L TMY++ G + AR F+
Sbjct: 187 IALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNR 246
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + + WNA++SGY +G YG EAI EM+ K +R+D ++ SA A +LEL
Sbjct: 247 MEKPNLILWNAMISGYANNG-YGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLEL 305
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
+ + G K Y V L+ Y+KC A VF R+ D++V+ W+ MI
Sbjct: 306 ARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGL 365
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ ++A+ L+ EM+ GVCPND TFIGL+ A LVKEG + L
Sbjct: 366 HGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQH 425
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG 330
+C++ + R + + + + +S W AL+S
Sbjct: 426 YSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 464
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 214/440 (48%), Gaps = 15/440 (3%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTAL 64
G + A F ++ PDI+ WN ++ G+ + D + + M + V + T+ L
Sbjct: 33 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
C G Q+H K+G S V+V N+L++MY+++G++ AR VFD++ ++ V
Sbjct: 93 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
SW +I+SGY Q+GD +EA+ EM + ++ D ++ S +A + ++L GK IHG+
Sbjct: 153 SWTSIISGYVQNGD-PMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 211
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDA 239
K+G + L + Y+K + A F RM N+I W MIS E+A
Sbjct: 212 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 271
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ LF+EM + + +T + A + ++ R + G K+ + + V LI M
Sbjct: 272 IKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 331
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYT 357
YA+ S+ + VFD ++ ++++ W+ +I GY +G A+ + +K++ PN T
Sbjct: 332 YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAI-CLYNEMKQAGVCPNDGT 390
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
F +L A + + K G + G++ S ++D+ G+ G + ++
Sbjct: 391 FIGLLTACKNSGLV--KEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMS 448
Query: 418 TQEKSEFA-WTAIISALARH 436
K + W A++SA H
Sbjct: 449 MPIKPGVSVWGALLSACKIH 468
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 192/621 (30%), Positives = 320/621 (51%), Gaps = 16/621 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + D +SWN ++S + E M V D T + +S C +
Sbjct: 202 LFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDL 261
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G +HSL V GL V + NAL+ MYS G+L EA +F M +D +SWN ++S
Sbjct: 262 VALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISS 321
Query: 133 YTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
Y Q + VEA+ L ++++ + ++F+SA AC + L G+ IH + ++
Sbjct: 322 YVQ-SNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQ 380
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEM 246
+ +GN L++ YSKC D +VF M +V+S + + +A+ +F M
Sbjct: 381 NVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWM 440
Query: 247 RLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
R G+ PN +T I L S+G+L G +H +T LS+ + N LITMYA
Sbjct: 441 RGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGD 500
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNA 364
++ S +F ++ + +ISWNA+I+ ++G A++ F +K + + L++
Sbjct: 501 LESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSS 560
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+A SL+ G + H +K GLD D V +A +DMYGK G + + + +
Sbjct: 561 --SANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQ 618
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W +IS AR+G ++ + FK M + G +PD +TF+++L+ C G+I KG ++SM
Sbjct: 619 CWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSM 678
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+ + P H C+VD+LGR+G+ EAE+ + ++P P + +SLL + R H N+++
Sbjct: 679 APTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDI 738
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
G + A L++++P +YVL+SNLYA W V LR MK+ + K SW +
Sbjct: 739 GRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLK- 797
Query: 605 IDGLHGFSSGDNTHPRSEEIY 625
+ + F GD +H +E+IY
Sbjct: 798 -NEVSTFGIGDRSHMHAEKIY 817
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 163/595 (27%), Positives = 273/595 (45%), Gaps = 59/595 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y G A +F + ++VSW ++ + ++AL RM GV+ +A
Sbjct: 86 LHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNA 145
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T +S C E + GLQ+ + +V GL + V V N+LITM+ R+ +A R+FD
Sbjct: 146 NALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDR 205
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D +SWNA++S Y+ + Y + + L +M ++ D + S S C + L
Sbjct: 206 MEERDRISWNAMISMYSHEEVYS-KCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVAL 264
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-- 235
G IH + + G V + N L++ YS +A +FR M R+VISW TMIS
Sbjct: 265 GSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQ 324
Query: 236 ----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E +L + ++ D PN +TF + A S + GR IH + ++ + +
Sbjct: 325 SNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLL 384
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ N L+TMY++ SM+D+E+VF+ + C +++S N L GYA +A F ++ +
Sbjct: 385 IGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALE-DVANAMRVFSWMRGT 443
Query: 352 --KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KPN T ++ + D+ +G H+++ + GL SD + ++L+ MY G +
Sbjct: 444 GIKPNYITMINLQGTCKSLGDLH-SYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLE 502
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
S +F+ KS +W AII+A RHG E + F + ++ G + D L+
Sbjct: 503 SSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSA 562
Query: 470 RNGMIHKGRHL----------------------------FDSMLKDYHIEPSPDH----- 496
+ +G L D MLK P P H
Sbjct: 563 NLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTL---PDPAHRPTQC 619
Query: 497 YSCMVDMLGRVGRLEEAEEL------VGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
++ ++ R G +EAE+ VGQ P +LL AC G ++ G
Sbjct: 620 WNTLISGYARYGYFKEAEDTFKHMVSVGQ---KPDYVTFVALLSACSHAGLIDKG 671
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 153/554 (27%), Positives = 264/554 (47%), Gaps = 34/554 (6%)
Query: 27 SWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTYSTALSFCLDH----EGFLFGLQL 79
SW T +SG + A + M V ++ ++ C +H EG G +
Sbjct: 8 SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTAC-EHRGWQEGAACGAAI 66
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H+L + GL VY+G AL+ +Y G ++ A+R+F EMP ++ VSW AI+ + +G
Sbjct: 67 HALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCM 126
Query: 140 GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
EA++A M ++G+ + + + S CG ++ G Q+ + G THVSV N
Sbjct: 127 E-EALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANS 185
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFKEMRLDGVCPN 254
L++ + DA ++F RM +R+ ISW MISM + V + +MR V P+
Sbjct: 186 LITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPD 245
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
T L+ + +LV G IH LC+ + + N L+ MY+ + ++E +F
Sbjct: 246 VTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFR 305
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDIS 372
+S R++ISWN +IS Y Q+ + A++ +++ E PN+ TF S L A + E +
Sbjct: 306 NMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE--A 363
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L +G+ H+ I++ L + ++G++LL MY K S+ +++RVF + +
Sbjct: 364 LMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGG 423
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK---GRHLFDS---MLK 486
A D + M F M G++P+ IT +++ C G +H H + + +L
Sbjct: 424 YAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLS 483
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
D +I S ++ M G LE + + +I +S +++ A HG GE
Sbjct: 484 DEYITNS------LITMYATCGDLESSTGIFSRINNKSVIS-WNAIIAANVRHGR---GE 533
Query: 547 RIADALMKMEPAGS 560
M + AG+
Sbjct: 534 EAIKLFMDSQHAGN 547
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 196/420 (46%), Gaps = 26/420 (6%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAI-LALIEMMR-KGLRLDHVSFTSAASACGH---E 172
MP++ S SW +SG + G+E+ L+ +MR + + L + S +AC H +
Sbjct: 1 MPHRTSSSWYTAVSGCAR---CGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQ 57
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT-M 231
+ G IH ++ + G +V +G L+ Y + +A ++F M RNV+SWT M
Sbjct: 58 EGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIM 117
Query: 232 ISMNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
++++ E+A+ ++ MR +GV N ++ G + + + L
Sbjct: 118 VALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLL 177
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ SV N LITM+ +QD+E++FD + R+ ISWNA+IS Y+ + F V
Sbjct: 178 THVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEV----YSKCFIV 233
Query: 348 IK-----ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
+ E KP+ T S+++ +++ ++L G HS + GL + +AL++MY
Sbjct: 234 LSDMRHGEVKPDVTTLCSLVSVCASSDLVAL--GSGIHSLCVSSGLHCSVPLINALVNMY 291
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE-MENKGVRPDSITF 461
G + E++ +F + +W +IS+ + + + ++ P+S+TF
Sbjct: 292 STAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTF 351
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
S L C + GR + +M+ ++ + ++ M + +E+ E + +P
Sbjct: 352 SSALGACSSPEALMNGRTIH-AMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMP 410
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 191/566 (33%), Positives = 307/566 (54%), Gaps = 14/566 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q++ ++ GL ++ I +G + A + F E+ D + WNAI+ GYTQ
Sbjct: 20 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79
Query: 138 DYGVEA-ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
V+A I ++M + + +F ACG +GKQIHG + K G+G++V V
Sbjct: 80 I--VDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFV 137
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGV 251
N L+S Y+K A VF ++HDR V+SWT++IS + +A+++FKEMR V
Sbjct: 138 QNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNV 197
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ + + ++ A + + +G+ IHGL K EP + L TMYA+ ++ +
Sbjct: 198 KPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARF 257
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAED 370
F+ + +I WNA+ISGYA NG A++ F +I K + ++ T S + + +A+
Sbjct: 258 FFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV--LASAQV 315
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
SL+ + +I K D V + L+DMY K GSI+ ++ VF+ +K W+ +I
Sbjct: 316 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 375
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
HG + + + EM+ GV P+ TF+ +LT C +G++ +G LF ++ D+ I
Sbjct: 376 MGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELF-HLMPDHGI 434
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIAD 550
EP HYSC+VD+LGR G L +A + + +P PG+SV +LL AC+IH V +GE A+
Sbjct: 435 EPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAE 494
Query: 551 ALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHG 610
L ++P +G YV +SNLYA W VA +R M KG+ K++G S ++ L
Sbjct: 495 QLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEIN--GNLET 552
Query: 611 FSSGDNTHPRSEEIYRMAECLGSEMK 636
F GD +HP+S+EI+ + L +K
Sbjct: 553 FQVGDRSHPKSKEIFEELDRLEKRLK 578
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 171/339 (50%), Gaps = 10/339 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K GQ A +F+ L++ +VSW +++SG+ ++ D AL+ M V D
Sbjct: 142 VSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDW 201
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + ++ + E G +H L+ K GL+ E + +L TMY++ G + AR F+
Sbjct: 202 IALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNR 261
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + + WNA++SGY +G YG EAI EM+ K +R+D ++ SA A +LEL
Sbjct: 262 MEKPNLILWNAMISGYANNG-YGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLEL 320
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
+ + G K Y V L+ Y+KC A VF R+ D++V+ W+ MI
Sbjct: 321 ARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGL 380
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ ++A+ L+ EM+ GVCPND TFIGL+ A LVKEG + L
Sbjct: 381 HGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQH 440
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG 330
+C++ + R + + + + +S W AL+S
Sbjct: 441 YSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 479
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 214/440 (48%), Gaps = 15/440 (3%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTAL 64
G + A F ++ PDI+ WN ++ G+ + D + + M + V + T+ L
Sbjct: 48 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
C G Q+H K+G S V+V N+L++MY+++G++ AR VFD++ ++ V
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 167
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
SW +I+SGY Q+GD +EA+ EM + ++ D ++ S +A + ++L GK IHG+
Sbjct: 168 SWTSIISGYVQNGD-PMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 226
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDA 239
K+G + L + Y+K + A F RM N+I W MIS E+A
Sbjct: 227 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 286
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ LF+EM + + +T + A + ++ R + G K+ + + V LI M
Sbjct: 287 IKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDM 346
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYT 357
YA+ S+ + VFD ++ ++++ W+ +I GY +G A+ + +K++ PN T
Sbjct: 347 YAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAI-CLYNEMKQAGVCPNDGT 405
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
F +L A + + K G + G++ S ++D+ G+ G + ++
Sbjct: 406 FIGLLTACKNSGLV--KEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMS 463
Query: 418 TQEKSEFA-WTAIISALARH 436
K + W A++SA H
Sbjct: 464 MPIKPGVSVWGALLSACKIH 483
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 290/500 (58%), Gaps = 14/500 (2%)
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
AL+EM G + + + +AC ++ L G+++H IK Y + L+ Y
Sbjct: 39 ALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYG 98
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM-RLDGVCPNDVTFI 259
KC+ DA KV M ++NV+SWT MIS + +A+++F EM R DG PN+ TF
Sbjct: 99 KCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK-PNEFTFA 157
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
++ + + + G+ IHGL +K N+ S V + L+ MYA+ ++++ ++F+ L R
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQR 378
+++S A+I+GYAQ GL A++ F + E PN T+ S+L A+ L HG++
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLA--LLDHGKQ 275
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H H+++ L ++ ++L+DMY K G++ ++R+F+ E++ +W A++ ++HG
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335
Query: 439 YESVMNQFKEMEN-KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-DYHIEPSPDH 496
V+ F+ M + K V+PD++T L+VL+ C M G ++FD M+ +Y +P +H
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH 395
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
Y C+VDMLGR GR++EA E + ++P P VL SLLGACR+H +V++GE + L+++E
Sbjct: 396 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIE 455
Query: 557 PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDN 616
P +G+YV++SNLYA G W V +R M K V KE G SW + LH F + D
Sbjct: 456 PENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSW--IQHEQTLHYFHANDR 513
Query: 617 THPRSEEIYRMAECLGSEMK 636
THPR EE+ + + +MK
Sbjct: 514 THPRREEVLAKMKEISIKMK 533
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 194/377 (51%), Gaps = 16/377 (4%)
Query: 46 LRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW 105
L M ++G Y L+ CLD G ++H+ ++K Y+ L+ Y +
Sbjct: 41 LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKC 100
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
L +AR+V DEMP K+ VSW A++S Y+Q G + EA+ EMMR + + +F +
Sbjct: 101 DCLEDARKVLDEMPEKNVVSWTAMISRYSQTG-HSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
++C L LGKQIHG+ +K Y +H+ VG+ L+ Y+K +A ++F + +R+V
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 226 ISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+S T +I+ E+A+ +F + +G+ PN VT+ L+ A+S L+ G+ H
Sbjct: 220 VSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCH 279
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
++ + N LI MY++ ++ + ++FD + R ISWNA++ GY+++GL
Sbjct: 280 VLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV 339
Query: 341 VQAFFGVIKES--KPNAYTFGSVLNAV--GAAEDISLK--HGQRCHSHIIKVGLDSDPIV 394
++ F + E KP+A T +VL+ G ED L G + K G +
Sbjct: 340 LELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH---- 395
Query: 395 GSALLDMYGKRGSIFES 411
++DM G+ G I E+
Sbjct: 396 YGCIVDMLGRAGRIDEA 412
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 156/311 (50%), Gaps = 14/311 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTY 60
Y K + A + + + ++VSW ++S + + S +AL+ M + T+
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+T L+ C+ G G Q+H LIVK+ DS ++VG++L+ MY++ G++ EAR +F+ +P
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D VS AI++GY Q G EA+ + +G+ ++V++ S +A L+ GKQ
Sbjct: 217 RDVVSCTAIIAGYAQLG-LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI------SM 234
H ++ + + N L+ YSKC A ++F M +R ISW M+ +
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335
Query: 235 NREDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV- 292
RE + LF+ MR + V P+ VT + ++ S G + G I + + ++P
Sbjct: 336 GRE-VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTE 394
Query: 293 -CNCLITMYAR 302
C++ M R
Sbjct: 395 HYGCIVDMLGR 405
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 17/202 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K+GQ +A IF L D+VS +++G+ + ++AL R++ G+ +
Sbjct: 195 LDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNY 254
Query: 58 VTYS---TALS--FCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
VTY+ TALS LDH G Q H +++ L + N+LI MYS+ G L AR
Sbjct: 255 VTYASLLTALSGLALLDH-----GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAR 309
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR--KGLRLDHVSFTSAASACG 170
R+FD MP + ++SWNA+L GY++ G G E +L L +MR K ++ D V+ + S C
Sbjct: 310 RLFDNMPERTAISWNAMLVGYSKHG-LGRE-VLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
Query: 171 HEKNLELGKQIHGVSIKMGYGT 192
H + + G I + YGT
Sbjct: 368 HGRMEDTGLNIFDGMVAGEYGT 389
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALS-FALRMNLIGVVFD 56
++MY K G A +F+N+ +SWN +L G+ K + L F L + V D
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIV--KFGLDSEVYVGNALITMYSRWGRLVEARRV 114
AVT LS C GL + +V ++G ++ M R GR+ EA
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 115 FDEMPNKDS 123
MP+K +
Sbjct: 416 IKRMPSKPT 424
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 212/653 (32%), Positives = 313/653 (47%), Gaps = 103/653 (15%)
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD---- 138
IVK S++ V N +I+ Y +WG LV+AR +FDEMP ++ VSW+A++SG + G
Sbjct: 78 IVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEES 137
Query: 139 --------------------------YGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
EA+ ++ G+R + V+FTS ACG
Sbjct: 138 MWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMS-------------TYSKCEV---------- 209
+ LG I G+ +K G+ ++SV N L++ + + E
Sbjct: 198 GDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 210 -----TGD---ANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDV 256
TGD A ++F M +RN ISW+ MI S E+A+ LF +M +G PN
Sbjct: 258 DAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNIS 317
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
F + A++ + G IHG K + + + LI +Y + D VFD +
Sbjct: 318 CFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLI 377
Query: 317 SCREIISWNALISGYAQNG-----------------LSLAAVQAFFG------------- 346
+ ++ WN+++ GY+ NG +S + A +
Sbjct: 378 LEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFN 437
Query: 347 --VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
++ PN TF SVL A A SL G H IIK+G+ D VG+AL DMY K
Sbjct: 438 TLLVSGQTPNKSTFSSVLCA--CASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAK 495
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLS 463
G I S++VF EK+E +WT +I LA G + F+EME V P+ + LS
Sbjct: 496 CGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLS 555
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL C G++ KG F+SM K Y I+P HY+C+VD+L R GRL EAEE + IP
Sbjct: 556 VLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQ 615
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
P + +LL C+ + + ++ ER A L ++ S YVL+SN+YA G W V+ +R
Sbjct: 616 PEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIR 675
Query: 584 KGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
K M+ KG++K G SW +V + +H F S D +H +S EIY + L SEMK
Sbjct: 676 KLMREKGLKKSGGCSWVEVR--NQVHSFYSEDGSHSQSNEIYGTLQLLRSEMK 726
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 177/379 (46%), Gaps = 57/379 (15%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y ++G +A IF+ + + +SW+ +++ + +S ++AL +M G +
Sbjct: 257 LDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNI 316
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD- 116
++ LS G+ +H + K G+D +V++G++LI +Y + G+ + R VFD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL 376
Query: 117 ------------------------------EMPNKDSVSWNAILSGYTQDGDYGVEAILA 146
+P K+ VSW I++GY ++ E +L
Sbjct: 377 ILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQ--CEKVLE 434
Query: 147 LIE-MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
+ ++ G + +F+S AC +L+ G +HG IK+G + VG L Y+
Sbjct: 435 VFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYA 494
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEM-RLDGVCPNDVTFI 259
KC G + +VF RM ++N ISWT MI E +++ LF+EM R V PN++ +
Sbjct: 495 KCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLL 554
Query: 260 GLIHAISIGNLVKEG-------RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
++ A S LV +G ++G+ K + C++ + +R + ++E+
Sbjct: 555 SVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYT------CVVDLLSRSGRLYEAEEF 608
Query: 313 FDELSCR-EIISWNALISG 330
+ + E +W AL+SG
Sbjct: 609 IRTIPFQPEANAWAALLSG 627
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 148/367 (40%), Gaps = 55/367 (14%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T + L+ S L+ +G ++H IKT F S+ + L+ +Y + +++ E
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHG 376
+++ N +IS Y Q G +L + F + E
Sbjct: 83 DGSDLVVSNCMISAYVQWG-NLVQARLLFDEMPE-------------------------- 115
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
+ + SAL+ K G + ES F ++ +WTA IS R+
Sbjct: 116 -------------RNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRN 162
Query: 437 G-DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
G ++E++ F+ +E+ GVRP+ +TF SV+ CG G G + ++K +
Sbjct: 163 GLNFEALKLFFRLLES-GVRPNDVTFTSVVRACGELGDFGLGMSILGLVVK-----AGFE 216
Query: 496 HY----SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
HY + ++ + R+G ++ A + ++ +S ++L A G++ RI D
Sbjct: 217 HYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVS-WTAILDAYVETGDLREARRIFD- 274
Query: 552 LMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGF 611
+M S+ M Y++ G E L M +G + + + + L
Sbjct: 275 --EMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRAL 332
Query: 612 SSGDNTH 618
S+G N H
Sbjct: 333 SAGINIH 339
>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
Length = 833
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 189/594 (31%), Positives = 316/594 (53%), Gaps = 23/594 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY + G + A IF+ + ++VSWN +++ + +A+ RM + +V
Sbjct: 243 VTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPT 302
Query: 58 -VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
V++ T L+ E G ++H++I + L S++ V NAL+TMY R G + +A RVF
Sbjct: 303 RVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFS 362
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +D VSWNA++S Y Q G E + M + + D ++F A AC ++L+
Sbjct: 363 AMERRDLVSWNAMISAYAQSG-LAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLD 421
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK--------VFRRMHDRNVISW 228
G+ +H +S++ G+G+ +SV N M YS C + ++ +F M R+VISW
Sbjct: 422 SGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVISW 481
Query: 229 TTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
TMI+ + A+S+FK M L+G+ N VTF+ L+ +++G IH I
Sbjct: 482 NTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVIN 541
Query: 284 TN--FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
S+P V ++ MY + + + +F++ S R + SWN++IS YA +G + A
Sbjct: 542 QTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAF 601
Query: 342 QAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
+ +E P+ TF ++LNA A +++HG+ H+ II GL+ D +V +AL++
Sbjct: 602 DLSERMRREGVLPDRVTFITLLNACVAGG--AVRHGKMIHARIIDSGLEKDTVVANALVN 659
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
Y K G++ + +F + +W II+ A +G + M+ GVRPD+IT
Sbjct: 660 FYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPDAIT 719
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
FL++L+ G + +G F SM D+ +E +HY CM+D+LGR GR+ +AE V +
Sbjct: 720 FLTILSASSHAGFLRQGGDDFVSMAVDHELERGVEHYGCMIDLLGRAGRIGDAEYFVSAM 779
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKG 574
+LL AC +HG+ E +R+A ++++M P S +YV +SNLYA G
Sbjct: 780 RDEDKEVSWMTLLSACEVHGDEERAKRVAGSIVEMNPQHSSAYVALSNLYATCG 833
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 164/540 (30%), Positives = 286/540 (52%), Gaps = 24/540 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
M MY K + D A+ +F+ + D++SWN ++ +S D L+ M L G+ D
Sbjct: 142 MGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDK 201
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ +AL+ C+ G +H+L+++ G++ +V +G AL+TMY R G L AR +F
Sbjct: 202 VTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHR 261
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLE 176
MP ++ VSWNA+++ T + + EAI M+ + VSF + +A + L
Sbjct: 262 MPERNVVSWNAMVASCTLNAHFA-EAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALA 320
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G++IH + + + + V N L++ Y +C GDA +VF M R+++SW MIS
Sbjct: 321 EGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYA 380
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + V+LF MR + V P+ +TF+ + A + + GR +H L +++ F S S
Sbjct: 381 QSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRTVHHLSVESGFGSCIS 440
Query: 292 VCNCLITMYARFES--------MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
V N + +Y+ S M+ +F+ ++ R++ISWN +I+GY Q G S +A+
Sbjct: 441 VANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVISWNTMITGYVQAGDSFSALSI 500
Query: 344 FFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG--LDSDPIVGSALLD 400
F ++ E + N TF S+L+ + L+ G+ H +I L SDPIV +A+++
Sbjct: 501 FKRMLLEGIRGNQVTFMSLLSVCDS--RAFLRQGETIHRRVINQTPELSSDPIVAAAIVN 558
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MYGK G + ++ +F +T ++ +W ++ISA A HG E + + M +GV PD +T
Sbjct: 559 MYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVT 618
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
F+++L C G + G+ + + + D +E + +V+ + G L+ A L G +
Sbjct: 619 FITLLNACVAGGAVRHGK-MIHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGAL 677
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 168/564 (29%), Positives = 285/564 (50%), Gaps = 26/564 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY + D+A +F+ + D+VSW ++S + ++ AL M + +
Sbjct: 40 VNMYRRCSSLDEARKVFDRMRERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNR 99
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT+ L C E G Q+H+ + L+S+V V NA++ MY + R A VF
Sbjct: 100 VTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFS 159
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNL 175
EM +D +SWN ++ + GDY LAL++ M+ +G+ D V+F SA +AC ++L
Sbjct: 160 EMRERDLISWNNAIAANAESGDYTF--TLALLKSMQLEGMAPDKVTFVSALNACIGSRSL 217
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
G+ IH + ++ G V +G L++ Y +C A ++F RM +RNV+SW M+
Sbjct: 218 SNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASC 277
Query: 233 SMNRE--DAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++N +A+ LFK M + V P V+FI +++A++ + EGR IH + + LS+
Sbjct: 278 TLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQ 337
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V N L+TMY R + D+E+VF + R+++SWNA+IS YAQ+GL+ V F +
Sbjct: 338 IEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRA 397
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E P+ TF L+A D L G+ H ++ G S V +A + +Y S
Sbjct: 398 ERVPPDRITFLMALDACAEIRD--LDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSS 455
Query: 409 FESQR--------VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
S +F + +W +I+ + GD S ++ FK M +G+R + +T
Sbjct: 456 SSSSSSLMEVVAGIFESMAARDVISWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVT 515
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSML-KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
F+S+L+VC + +G + ++ + + P + +V+M G+ G L+ A L +
Sbjct: 516 FMSLLSVCDSRAFLRQGETIHRRVINQTPELSSDPIVAAAIVNMYGKCGELDTARHLF-E 574
Query: 520 IPGGPGLSVLQSLLGACRIHGNVE 543
L+ S++ A +HG E
Sbjct: 575 DTSHRNLASWNSMISAYALHGRAE 598
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 217/411 (52%), Gaps = 11/411 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G ++H + + D ++ GN L+ MY R L EAR+VFD M +D VSW A++S Y Q
Sbjct: 17 GRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTAMISAYAQ 76
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG-VSIKMGYGTHV 194
G + +A+ EM L + V+F + AC + LE GKQIH VS + V
Sbjct: 77 TG-HQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDV 135
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLD 249
V N +M Y KCE A VF M +R++ISW I+ N E ++L K M+L+
Sbjct: 136 PVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLE 195
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
G+ P+ VTF+ ++A + GR+IH L ++ + + L+TMY R ++ +
Sbjct: 196 GMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESA 255
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGA 367
++F + R ++SWNA+++ N A++ F ++ + +P +F +VLNAV
Sbjct: 256 REIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTT 315
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
E +L G+R H+ I + L S V +AL+ MYG+ G + +++RVF+ + + +W
Sbjct: 316 PE--ALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWN 373
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
A+ISA A+ G V+N F M + V PD ITFL L C + GR
Sbjct: 374 AMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGR 424
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 191/359 (53%), Gaps = 15/359 (4%)
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
ACG LE G+++HG + + GN L++ Y +C +A KVF RM +R+V+S
Sbjct: 7 ACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVS 66
Query: 228 WTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
WT MIS ++ A+ LF EM + PN VTF+ L+ A +++G+ IH
Sbjct: 67 WTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVS 126
Query: 283 KTNFL-SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG---LSL 338
L S+ V N ++ MY + E + VF E+ R++ISWN I+ A++G +L
Sbjct: 127 ALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTL 186
Query: 339 AAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
A +++ ++ P+ TF S LNA + SL +G+ H+ +++ G++ D ++G+AL
Sbjct: 187 ALLKSM--QLEGMAPDKVTFVSALNACIGSR--SLSNGRLIHALVLERGMEGDVVLGTAL 242
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPD 457
+ MYG+ G + ++ +F+ E++ +W A++++ + + + FK M V P
Sbjct: 243 VTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPT 302
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
++F++VL + +GR + +M+++ + + + +V M GR G + +AE +
Sbjct: 303 RVSFITVLNAVTTPEALAEGRRIH-AMIQERQLLSQIEVANALVTMYGRCGGVGDAERV 360
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 159/306 (51%), Gaps = 11/306 (3%)
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
+ L+ A I +++GR +HG + N L+ MY R S+ ++ KVFD +
Sbjct: 1 YARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMR 60
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHG 376
R+++SW A+IS YAQ G A+ F + S PN TF ++L A + E L+ G
Sbjct: 61 ERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPE--FLEDG 118
Query: 377 QRCHSHIIKVGL-DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
++ H+ + + L +SD V +A++ MY K + VF+E +E+ +W I+A A
Sbjct: 119 KQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAE 178
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
GDY + K M+ +G+ PD +TF+S L C + + GR L +++ + +E
Sbjct: 179 SGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGR-LIHALVLERGMEGDVV 237
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN----VEMGERIADA 551
+ +V M GR G LE A E+ ++P +S +++ +C ++ + +E+ +R+ A
Sbjct: 238 LGTALVTMYGRCGCLESAREIFHRMPERNVVS-WNAMVASCTLNAHFAEAIELFKRMV-A 295
Query: 552 LMKMEP 557
+ +EP
Sbjct: 296 VAMVEP 301
>gi|302755014|ref|XP_002960931.1| hypothetical protein SELMODRAFT_74762 [Selaginella moellendorffii]
gi|300171870|gb|EFJ38470.1| hypothetical protein SELMODRAFT_74762 [Selaginella moellendorffii]
Length = 643
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 186/591 (31%), Positives = 301/591 (50%), Gaps = 27/591 (4%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD----ALSFALRMNLIGVVFDA 57
+MY K G+ D++ IF+ + + ++ SW +++ F +S D AL M+ GV +A
Sbjct: 54 DMYGKCGRPDESRKIFDAIADKNVFSWTILIAAFSESADRRWEALHLLRFMDQSGVAPNA 113
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L C + + LH+ I GLD E+ VG AL+ Y + G + AR F +
Sbjct: 114 ATFVSVLVACSELRCLDAVIALHARIASLGLDLEIVVGTALVNAYGKCGSVDRARNAFAK 173
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP K+S+ W A+++ Q+G +G A+ M+ +GL+ D V+F SA AC
Sbjct: 174 MPRKNSICWTAVITANAQNGRFG-PAMELYERMVLEGLKPDRVTFVSALDACASSPRSPP 232
Query: 178 GKQIHGVSIKM----------GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
+ + ++ G+G+ V L++ Y K A ++F + +RN +
Sbjct: 233 PRYRAVAAQRIASLAAAVAASGHGSSPIVAAALLNMYGKLGELDRAREIFHSLPERNAVM 292
Query: 228 WTTMISMNRE-----DAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKE-GRMIHGL 280
W MI+++ + +A+ F M LDG P+ TF +I A + G + + IHG
Sbjct: 293 WNVMIAVSSQAGAIHEALGFFWAMNLDGAARPDGSTFTSIISACAAGGVPPDLAVRIHGA 352
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+ + + + L+ +YA+ D+ +VF E+ + ++ W ALIS A +G S A
Sbjct: 353 LLSSGVTLDDQLLTALLGLYAKCSRTDDARRVFSEIWEKGVVPWTALISALAADGRSSDA 412
Query: 341 VQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
V A + E +PN YTF + A+ AA + + HG+ H+ GLDSDP V + ++
Sbjct: 413 VAALRRMELEGVRPNEYTF---VAAIEAASQLGIAHGRSLHARATSAGLDSDPFVANTVM 469
Query: 400 DMYGKRGSIFESQRVFNET-QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
MY GSI E++ VF+ ++ +W +I ALARHG + + EME GV P +
Sbjct: 470 AMYASCGSIAEARAVFDGMGHRRNLVSWNCMIEALARHGHSLESLELYSEMELDGVPPSA 529
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
TF+SVL C G + G H F + +DY I+ +H C+VD+LGR G L+ AE +
Sbjct: 530 ATFVSVLAACSHVGEVELGYHYFVAFRRDYGIQAEAEHIGCVVDLLGRAGWLDSAESFIQ 589
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNL 569
+P S LLGAC+ HG+ G R+A + ++ + SYV +SNL
Sbjct: 590 SLPAADLSSSWAVLLGACKTHGDATRGARVAGWALGVDGQDAASYVTVSNL 640
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/544 (26%), Positives = 248/544 (45%), Gaps = 64/544 (11%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKF-GLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY+ L C D G ++H I KF GL + ++ N L MY + GR E+R++FD
Sbjct: 12 TYAAVLRRCADDRALEQGQRIHDHIRKFHGLSQDRFLANCLADMYGKCGRPDESRKIFDA 71
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +K+ SW +++ +++ D EA+ L M + G+ + +F S AC + L+
Sbjct: 72 IADKNVFSWTILIAAFSESADRRWEALHLLRFMDQSGVAPNAATFVSVLVACSELRCLDA 131
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
+H +G + VG L++ Y KC A F +M +N I WT +I+ N +
Sbjct: 132 VIALHARIASLGLDLEIVVGTALVNAYGKCGSVDRARNAFAKMPRKNSICWTAVITANAQ 191
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAI--SIGNLVKEGRMIHGLCIKTNFL--- 287
+ A+ L++ M L+G+ P+ VTF+ + A S + R + I +
Sbjct: 192 NGRFGPAMELYERMVLEGLKPDRVTFVSALDACASSPRSPPPRYRAVAAQRIASLAAAVA 251
Query: 288 -----SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
S P V L+ MY + + + ++F L R + WN +I+ +Q G A+
Sbjct: 252 ASGHGSSPIVAAALLNMYGKLGELDRAREIFHSLPERNAVMWNVMIAVSSQAGAIHEALG 311
Query: 343 AFFGVIKE--SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
F+ + + ++P+ TF S+++A AA + R H ++ G+ D + +ALL
Sbjct: 312 FFWAMNLDGAARPDGSTFTSIISAC-AAGGVPPDLAVRIHGALLSSGVTLDDQLLTALLG 370
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
+Y K +++RVF+E EK WTA+ISALA G + + ME +GVRP+ T
Sbjct: 371 LYAKCSRTDDARRVFSEIWEKGVVPWTALISALAADGRSSDAVAALRRMELEGVRPNEYT 430
Query: 461 FLSVLTVCGRNGMIH----------------------------------KGRHLFDSMLK 486
F++ + + G+ H + R +FD M
Sbjct: 431 FVAAIEAASQLGIAHGRSLHARATSAGLDSDPFVANTVMAMYASCGSIAEARAVFDGMGH 490
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ-----IPGGPGLSVLQSLLGACRIHGN 541
++ ++CM++ L R G E+ EL + +P P + S+L AC G
Sbjct: 491 RRNLV----SWNCMIEALARHGHSLESLELYSEMELDGVP--PSAATFVSVLAACSHVGE 544
Query: 542 VEMG 545
VE+G
Sbjct: 545 VELG 548
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 214/467 (45%), Gaps = 38/467 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N Y K G D+A F + + + W V++ ++ A+ RM L G+ D
Sbjct: 155 VNAYGKCGSVDRARNAFAKMPRKNSICWTAVITANAQNGRFGPAMELYERMVLEGLKPDR 214
Query: 58 VTYSTALSFCLDHE----------GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
VT+ +AL C L + + G S V AL+ MY + G
Sbjct: 215 VTFVSALDACASSPRSPPPRYRAVAAQRIASLAAAVAASGHGSSPIVAAALLNMYGKLGE 274
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR--KGLRLDHVSFTSA 165
L AR +F +P +++V WN +++ +Q G + L M R D +FTS
Sbjct: 275 LDRAREIFHSLPERNAVMWNVMIAVSSQAG--AIHEALGFFWAMNLDGAARPDGSTFTSI 332
Query: 166 ASACGHEK-NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
SAC +L +IHG + G + L+ Y+KC T DA +VF + ++
Sbjct: 333 ISACAAGGVPPDLAVRIHGALLSSGVTLDDQLLTALLGLYAKCSRTDDARRVFSEIWEKG 392
Query: 225 VISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIH 278
V+ WT +IS DAV+ + M L+GV PN+ TF+ I A S +G + GR +H
Sbjct: 393 VVPWTALISALAADGRSSDAVAALRRMELEGVRPNEYTFVAAIEAASQLG--IAHGRSLH 450
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISGYAQNGLS 337
S+P V N ++ MYA S+ ++ VFD + R ++SWN +I A++G S
Sbjct: 451 ARATSAGLDSDPFVANTVMAMYASCGSIAEARAVFDGMGHRRNLVSWNCMIEALARHGHS 510
Query: 338 LAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII---KVGLDSDPI 393
L +++ + + + P+A TF SVL A ++ L + H + G+ ++
Sbjct: 511 LESLELYSEMELDGVPPSAATFVSVLAACSHVGEVELGY----HYFVAFRRDYGIQAEAE 566
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEF--AWTAIISALARHGD 438
++D+ G+ G + +S F ++ ++ +W ++ A HGD
Sbjct: 567 HIGCVVDLLGRAGWL-DSAESFIQSLPAADLSSSWAVLLGACKTHGD 612
>gi|356495279|ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial-like [Glycine max]
Length = 944
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 194/620 (31%), Positives = 320/620 (51%), Gaps = 28/620 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVF-D 56
+++Y + A +F + DIVSWN ++ GF K + ++M +G D
Sbjct: 335 ISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPD 394
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSE-VYVGNALITMYSRWGRLVEARRVF 115
VT T L C + G +H ++ + S+ V + N+LI MYS+ + +A +F
Sbjct: 395 IVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLF 454
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG--HEK 173
+ KD+VSWNA++SGY+ + Y EA EM+R G + + S+C +
Sbjct: 455 NSTAEKDTVSWNAMISGYSHN-RYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNIN 513
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR----NVISWT 229
++ GK +H +K G+ H+ + N+LM Y C GD F +H+ ++ SW
Sbjct: 514 SIHFGKSVHCWQLKSGFLNHILLINILMHMYINC---GDLTASFSILHENSALADIASWN 570
Query: 230 TMI-----SMNREDAVSLFKEMRLDGVCPND-VTFIGLIHAISIGNLVKEGRMIHGLCIK 283
T+I + +A+ F MR + D +T + + A + L G+ +HGL +K
Sbjct: 571 TLIVGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVK 630
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ S+ V N LITMY R + ++ VF S + SWN +IS + N S A++
Sbjct: 631 SPLGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESREALEL 690
Query: 344 FFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
F + + +PN T VL+A + L+HG++ H+H+ + + + + +AL+D+Y
Sbjct: 691 FLNL--QFEPNEITIIGVLSA--CTQIGVLRHGKQVHAHVFRTCIQDNSFISAALIDLYS 746
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
G + + +VF +EKSE AW ++ISA HG E + F EM G R TF+S
Sbjct: 747 NCGRLDTALQVFRHAKEKSESAWNSMISAYGYHGKGEKAIKLFHEMCESGARVSKSTFVS 806
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
+L+ C +G++++G ++ ML+ Y ++P +H +VDMLGR GRL+EA E G
Sbjct: 807 LLSACSHSGLVNQGLWFYECMLERYGVQPETEHQVYVVDMLGRSGRLDEAYEFA---KGC 863
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
V +LL AC HG +++G++IA L ++EP G Y+ +SN+Y G W+ LR
Sbjct: 864 DSSGVWGALLSACNYHGELKLGKKIAQYLFQLEPQNVGHYISLSNMYVAAGSWKDATELR 923
Query: 584 KGMKSKGVRKEVGFSWADVG 603
+ ++ G+RK G+S DVG
Sbjct: 924 QSIQDLGLRKTAGYSLVDVG 943
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 154/592 (26%), Positives = 279/592 (47%), Gaps = 46/592 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+ +Y K+G F + +F+ + N D ++WN +++ ++ A+ F +M FD+
Sbjct: 133 LTIYSKAGDFTSSKGLFDEIQNRDAIAWNAIVAASLENKCYRIAMDFFDKMIKAQTGFDS 192
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +S L + F G +H + +K G+ ++ +GNAL+ MY++ G L + +++E
Sbjct: 193 TTLLLIVSASLHMKNFDQGRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLYEE 252
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD+VSWN+I+ G + + +A+ M D+VS A SA L
Sbjct: 253 IECKDAVSWNSIMRGSLYN-RHPEKALCYFKRMSFSEETADNVSLCCAISASSSLGELSF 311
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+ +HG+ IK+GY +HVSV N L+S YS+CE A +FR + ++++SW M+
Sbjct: 312 GQSVHGLGIKLGYKSHVSVANSLISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFAS 371
Query: 233 SMNREDAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ ++ L +M+ G P+ VT I L+ + L +EGR IHG I+ +S+
Sbjct: 372 NGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHV 431
Query: 292 -VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ N LI MY++ ++ +E +F+ + ++ +SWNA+ISGY+ N S A Q F +
Sbjct: 432 MLLNSLIGMYSKCNLVEKAELLFNSTAEKDTVSWNAMISGYSHNRYSEEA-QNLFTEMLR 490
Query: 351 SKPN--AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
PN + T ++L++ + S+ G+ H +K G + ++ + L+ MY G +
Sbjct: 491 WGPNCSSSTVFAILSSCNSLNINSIHFGKSVHCWQLKSGFLNHILLINILMHMYINCGDL 550
Query: 409 FESQRVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLT 466
S + +E ++ A W +I R + + F M + + DSIT +S L+
Sbjct: 551 TASFSILHENSALADIASWNTLIVGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALS 610
Query: 467 VCGRNGMIHKGRHLFDSMLKD------------------------------YHIEPSPDH 496
C + + G+ L +K + P+
Sbjct: 611 ACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCS 670
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
++CM+ L EA EL + P + +L AC G + G+++
Sbjct: 671 WNCMISALSHNRESREALELFLNLQFEPNEITIIGVLSACTQIGVLRHGKQV 722
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 157/578 (27%), Positives = 272/578 (47%), Gaps = 32/578 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G + C++ + D VSWN+++ G + AL + RM+ D
Sbjct: 234 VDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSLYNRHPEKALCYFKRMSFSEETADN 293
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V+ A+S FG +H L +K G S V V N+LI++YS+ + A +F E
Sbjct: 294 VSLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVSVANSLISLYSQCEDIKAAETLFRE 353
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLE 176
+ KD VSWNA++ G+ +G E L++M + G + D V+ + C
Sbjct: 354 IALKDIVSWNAMMEGFASNGKIK-EVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSR 412
Query: 177 LGKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--- 232
G+ IHG +I+ HV + N L+ YSKC + A +F +++ +SW MI
Sbjct: 413 EGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAEKDTVSWNAMISGY 472
Query: 233 SMNR--EDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIG-NLVKEGRMIHGLCIKTNFLS 288
S NR E+A +LF EM R C + F L S+ N + G+ +H +K+ FL+
Sbjct: 473 SHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNINSIHFGKSVHCWQLKSGFLN 532
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSC-REIISWNALISGYAQNGLSLAAVQAFFGV 347
+ N L+ MY + S + E S +I SWN LI G + A++ F +
Sbjct: 533 HILLINILMHMYINCGDLTASFSILHENSALADIASWNTLIVGCVRCDHFREALET-FNL 591
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKH-GQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+++ P Y ++++A+ A ++ L + G+ H +K L SD V ++L+ MY +
Sbjct: 592 MRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRCR 651
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I ++ VF + +W +ISAL+ + + + F ++ P+ IT + VL+
Sbjct: 652 DINSAKVVFKFFSTPNLCSWNCMISALSHNRESREALELFLNLQ---FEPNEITIIGVLS 708
Query: 467 VCGRNGMIHKGR----HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
C + G++ G+ H+F + ++D + ++D+ GRL+ A + V +
Sbjct: 709 ACTQIGVLRHGKQVHAHVFRTCIQDNSFISAA-----LIDLYSNCGRLDTALQ-VFRHAK 762
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGS 560
S S++ A HG GE+ +M +G+
Sbjct: 763 EKSESAWNSMISAYGYHGK---GEKAIKLFHEMCESGA 797
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 227/446 (50%), Gaps = 24/446 (5%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
F+ V Y + CL + H +K G + + +L+T+YS+ G ++ +
Sbjct: 92 FELVDY---IKLCLKKPKIVTATVAHCAALKIGALAHLPTSTSLLTIYSKAGDFTSSKGL 148
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FDE+ N+D+++WNAI++ ++ Y + A+ +M++ D + SA H KN
Sbjct: 149 FDEIQNRDAIAWNAIVAASLENKCYRI-AMDFFDKMIKAQTGFDSTTLLLIVSASLHMKN 207
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
+ G+ IH VSIK G +S+GN L+ Y+KC + ++ + ++ +SW +++
Sbjct: 208 FDQGRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRG 267
Query: 234 --MNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
NR E A+ FK M ++V+ I A S + G+ +HGL IK + S
Sbjct: 268 SLYNRHPEKALCYFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHGLGIKLGYKSH 327
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N LI++Y++ E ++ +E +F E++ ++I+SWNA++ G+A NG ++ F ++
Sbjct: 328 VSVANSLISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNG----KIKEVFDLLV 383
Query: 350 ES------KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMY 402
+ +P+ T ++L AE + + G+ H + I+ + SD + + ++L+ MY
Sbjct: 384 QMQKVGFFQPDIVTLITLLPL--CAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMY 441
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K + +++ +FN T EK +W A+IS + + E N F EM G S T
Sbjct: 442 SKCNLVEKAELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVF 501
Query: 463 SVLTVCGRNGM--IHKGRHLFDSMLK 486
++L+ C + IH G+ + LK
Sbjct: 502 AILSSCNSLNINSIHFGKSVHCWQLK 527
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 169/365 (46%), Gaps = 9/365 (2%)
Query: 159 HVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR 218
H C + + H ++K+G H+ L++ YSK + +F
Sbjct: 91 HFELVDYIKLCLKKPKIVTATVAHCAALKIGALAHLPTSTSLLTIYSKAGDFTSSKGLFD 150
Query: 219 RMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE 273
+ +R+ I+W +++ + E+ A+ F +M + T + ++ A +
Sbjct: 151 EIQNRDAIAWNAIVAASLENKCYRIAMDFFDKMIKAQTGFDSTTLLLIVSASLHMKNFDQ 210
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
GR IH + IK+ L + S+ N L+ MYA+ + SE +++E+ C++ +SWN+++ G
Sbjct: 211 GRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSLY 270
Query: 334 NGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDP 392
N A+ +F + S+ A S+ A+ A+ + L GQ H IK+G S
Sbjct: 271 NRHPEKAL-CYFKRMSFSEETADNV-SLCCAISASSSLGELSFGQSVHGLGIKLGYKSHV 328
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
V ++L+ +Y + I ++ +F E K +W A++ A +G + V + +M+
Sbjct: 329 SVANSLISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKV 388
Query: 453 G-VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
G +PD +T +++L +C + +GR + ++ I + ++ M + +E
Sbjct: 389 GFFQPDIVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVE 448
Query: 512 EAEEL 516
+AE L
Sbjct: 449 KAELL 453
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 315/581 (54%), Gaps = 16/581 (2%)
Query: 41 ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALIT 100
AL M G+V D ++ ++ C + G +LH ++ G +++ + AL+
Sbjct: 14 ALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQ 73
Query: 101 MYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV 160
MY++ G L +A+RVF+ M KD +W++I++ Y + G G A++ M+ +G+ + V
Sbjct: 74 MYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAG-RGEMAVVLYRRMIAEGVEPNVV 132
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+F A C L G+ IH + + + L++ Y KC+ +A KVF M
Sbjct: 133 TFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGM 192
Query: 221 HDRNVISWTTMISM-----NREDAVSLFKEM-RLDGVCPNDVTFIGLIHAIS-IGNLVKE 273
RNV S+T MIS +A+ LF M +++ + PN TF ++ A+ +GNL K
Sbjct: 193 KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEK- 251
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
GR +H F + V N L+TMY + S ++ KVFD ++ R +ISW ++I+ YAQ
Sbjct: 252 GRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQ 311
Query: 334 NGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
+G A+ F + + +P+ +F S LNA +L G+ H +++ L S P
Sbjct: 312 HGNPQEALNLFKRM--DVEPSGVSFSSALNACALLG--ALDEGREIHHRVVEANLAS-PQ 366
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+ ++LL MY + GS+ +++RVFN + + F+ A+I+A +HG + + +++ME +G
Sbjct: 367 METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEG 426
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ D ITF+SVL C ++ R S++ D+ + P +HY CMVD+LGR GRL +A
Sbjct: 427 IPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDA 486
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEK 573
EELV +P +LL C+ HG+++ GER A + ++ PA + YV +SN+YA
Sbjct: 487 EELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAA 546
Query: 574 GDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSG 614
++ +RK M+ +GV + V S+ ++ + LH F+SG
Sbjct: 547 KRFDDARRVRKEMEERGVTRPVAVSYIEID--NELHMFTSG 585
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 239/455 (52%), Gaps = 25/455 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY K G D A +F + D+ +W+++++ + ++ + A+ RM GV +
Sbjct: 72 LQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNV 131
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT++ AL C G G +H I+ + + + ++L+ MY + +VEAR+VF+
Sbjct: 132 VTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEG 191
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M ++ S+ A++S Y Q G++ EA+ M + + + + +F + A NLE
Sbjct: 192 MKARNVRSYTAMISAYVQAGEHA-EALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLE 250
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+++H G+ T+V V N L++ Y KC +A KVF M RNVISWT+MI+
Sbjct: 251 KGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYA 310
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N ++A++LFK M ++ P+ V+F ++A ++ + EGR IH ++ N L+ P
Sbjct: 311 QHGNPQEALNLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHHRVVEAN-LASPQ 366
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ L++MYAR S+ D+ +VF+ + R+ S NA+I+ + Q+G A++ + + +E
Sbjct: 367 METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEG 426
Query: 352 KP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD--PIVGSAL--LDMYGKRG 406
P + TF SVL A ++ C + + +D P+V L +D+ G+ G
Sbjct: 427 IPADGITFVSVLVACSHTSLVA-----DCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSG 481
Query: 407 SIFESQRVFNETQEKSE-FAWTAIISALARHGDYE 440
+ +++ + +++ AW ++S RHGD +
Sbjct: 482 RLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLD 516
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/533 (33%), Positives = 290/533 (54%), Gaps = 13/533 (2%)
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A +F ++ DS ++N ++ G+T EAIL EM ++ D +F C
Sbjct: 77 AVSIFRQIDEPDSPAYNIMIRGFTLKQSPH-EAILLFKEMHENSVQPDEFTFPCILKVCS 135
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+ L G+QIH + +K G+G+H V N L+ Y+ C A +VF M +RNV +W +
Sbjct: 136 RLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNS 195
Query: 231 MI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
M S N E+ V LF EM + ++VT + ++ A ++ G I+ +
Sbjct: 196 MFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKG 255
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
P++ L+ MYA+ + + ++FD++ R++++W+A+ISGY+Q A+ F
Sbjct: 256 LKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFH 315
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ K + PN T S+L++ +L+ G+ H I K + +G+AL+D Y K
Sbjct: 316 EMQKANIDPNEITMVSILSSCAVLG--ALETGKWVHFFIKKKRMKLTVTLGTALMDFYAK 373
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GS+ S VF + K+ +WT +I LA +G + + F M K V P+ +TF+ V
Sbjct: 374 CGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGV 433
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L+ C G++ +GR LF SM +D+ IEP +HY CMVD+LGR G +EEA + + +P P
Sbjct: 434 LSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQP 493
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ ++LL +C++H NVE+GE L+ +EP SG Y+L+SN+YA G WE +R
Sbjct: 494 NAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRG 553
Query: 585 GMKSKGVRKEVGFSWADVGDIDG-LHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
MK KG++K G S + ++DG +H F + DN H +SEEIY E + ++K
Sbjct: 554 EMKEKGIKKTPGCS---LIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIK 603
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 155/590 (26%), Positives = 280/590 (47%), Gaps = 63/590 (10%)
Query: 11 DKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTYSTALSFC 67
D A+ IF ++ PD ++N ++ GF + +A+ M+ V D T+ L C
Sbjct: 75 DYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVC 134
Query: 68 LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN 127
+ G Q+H+LI+K G S +V N LI MY+ G + ARRVFDEM ++ +WN
Sbjct: 135 SRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWN 194
Query: 128 AILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
++ +GYT+ G++ E + EM+ +R D V+ S +ACG +LELG+ I+ +
Sbjct: 195 SMFAGYTKSGNWE-EVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEE 253
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSL 242
G + ++ L+ Y+KC A ++F +M R+V++W+ MIS + +A+ L
Sbjct: 254 KGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDL 313
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
F EM+ + PN++T + ++ + ++ ++ G+ +H K ++ L+ YA+
Sbjct: 314 FHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAK 373
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSV 361
S++ S +VF ++ + ++SW LI G A NG A++ F+ ++ K +PN TF V
Sbjct: 374 CGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGV 433
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L+A H+ ++ G D +F S + +
Sbjct: 434 LSACS-------------HAGLVDEGRD------------------LFVSMSRDFGIEPR 462
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
E + ++ L R G E F+ ++N ++P+++ + ++L C +HK +
Sbjct: 463 IEH-YGCMVDILGRAGLIEEA---FQFIKNMPIQPNAVIWRTLLASCK----VHKNVEIG 514
Query: 482 DSMLKDYHI-EPSPD-HYSCMVDMLGRVGRLEEAEELVGQ-----IPGGPGLS------V 528
+ LK I EP+ Y + ++ VGR E+A ++ G+ I PG S V
Sbjct: 515 EESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGV 574
Query: 529 LQSLLGACRIHGNV-EMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
+ +H E+ I D + +++ AG + L AE+ D E
Sbjct: 575 IHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKE 624
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 166/316 (52%), Gaps = 20/316 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY G+ + A +F+ ++ ++ +WN++ +G+ KS ++ + M + + FD
Sbjct: 166 IHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDE 225
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKF----GLDSEVYVGNALITMYSRWGRLVEARR 113
VT + L+ C G L L+L I ++ GL + +L+ MY++ G++ ARR
Sbjct: 226 VTLVSVLTAC----GRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARR 281
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
+FD+M +D V+W+A++SGY+Q EA+ EM + + + ++ S S+C
Sbjct: 282 LFDQMDRRDVVAWSAMISGYSQ-ASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLG 340
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI- 232
LE GK +H K V++G LM Y+KC + +VF +M +NV+SWT +I
Sbjct: 341 ALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQ 400
Query: 233 ----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ + A+ F M V PNDVTFIG++ A S LV EGR + + + +F
Sbjct: 401 GLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLF-VSMSRDFGI 459
Query: 289 EPSVCN--CLITMYAR 302
EP + + C++ + R
Sbjct: 460 EPRIEHYGCMVDILGR 475
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 116/239 (48%), Gaps = 8/239 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K GQ D A +F+ ++ D+V+W+ ++SG+ ++ +AL M + +
Sbjct: 267 VDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNE 326
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T + LS C G +H I K + V +G AL+ Y++ G + + VF +
Sbjct: 327 ITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGK 386
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP K+ +SW ++ G +G G +A+ M+ K + + V+F SAC H ++
Sbjct: 387 MPVKNVLSWTVLIQGLASNGQ-GKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDE 445
Query: 178 GKQIHGVSIKMGYGTHVSVGN--VLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMIS 233
G+ + VS+ +G + + ++ + + +A + + M N + W T+++
Sbjct: 446 GRDLF-VSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLA 503
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/611 (30%), Positives = 318/611 (52%), Gaps = 18/611 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSF---ALRMNLIGVV 54
++ Y G A +F+ PD S+ +L E+ DA++ R
Sbjct: 104 LSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPEA 163
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D S AL C+ + +G LH +K G ++ +V N+L+ MY++ L AR+V
Sbjct: 164 QDDFVLSLALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARKV 222
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F+ +P+++ VSW +++SG Q+G + + +L +M + + + + +AC
Sbjct: 223 FERIPDRNVVSWTSMISGCVQNG-FASDGLLLFNKMRQDNVPPSEYTIATVITACSALFG 281
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L G+ +HG IK G ++ + L+ Y KC A VF + +++ WTTMI
Sbjct: 282 LHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVG 341
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ N DA+ LF + R + PN VT ++ A + + G+ IHGL +K +
Sbjct: 342 YTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEY 401
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-I 348
V N L+ MYA+ +++ +++++F +S +++++WN++ISGYA+N + A+ F + +
Sbjct: 402 NVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSL 461
Query: 349 KESKPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ S P+A SV+NA+ A+ + L G+ H + +K S+ V +ALL++Y K G
Sbjct: 462 QGSSPDAI---SVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGD 518
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++RVF+E +++ W A+I GD ++ F EM GV P+ I F S+L+
Sbjct: 519 LLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILST 578
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C +GM+ G+ FDSM + ++I PS HY+CMVD+L R G LE+A E + +P S
Sbjct: 579 CSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTS 638
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V + L C +H ++ E +M + P YVL+SNLY G W+ +R+ M+
Sbjct: 639 VWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSNGMWDKSLAIRRWMQ 698
Query: 588 SKGVRKEVGFS 598
KG+ K G S
Sbjct: 699 EKGLVKLPGCS 709
>gi|125591533|gb|EAZ31883.1| hypothetical protein OsJ_16048 [Oryza sativa Japonica Group]
Length = 674
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 197/654 (30%), Positives = 356/654 (54%), Gaps = 36/654 (5%)
Query: 1 MNMYCKSGQFDKALC-----IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIG 52
+N+Y S ++ +A +F+ + ++VSWNT+ + K+ +AL +RM G
Sbjct: 19 LNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDG 78
Query: 53 VVFDAVTYSTALSFCL-DHEGFLFGLQLHSLIVKFGLD--SEVYVGNALITMYSRWGRLV 109
V++ + D + F QL+ L+VK+G++ ++++V ++ I M+S +G +
Sbjct: 79 FRPTPVSFVNIFPAAVADDPSWPF--QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQ 136
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASA 168
ARRVFD K++ WN +++GY Q+G + EAI +++ + + LD V+F SA +A
Sbjct: 137 SARRVFDRAAKKNTEVWNTMITGYVQNGQFS-EAIDLFSKILGSREVPLDVVTFLSALTA 195
Query: 169 CGHEKNLELGKQIHGVSIK-MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
+++ LG+Q+HG IK M V +GN L+ YS+C A +F R+ ++++++
Sbjct: 196 ASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVT 255
Query: 228 WTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
W TM++ + + + L EM+ G + VT ++ A S ++ G+ HG I
Sbjct: 256 WNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLI 315
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL--SCREIISWNALISGYAQNGLSLAA 340
+ E + + LI MYA+ ++ +++VFD + R+ ++WNA+I+GY Q+G A
Sbjct: 316 RHGIEGE-GLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKA 374
Query: 341 VQAFFGVIKES-KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
+ F +++ +P + T SVL A VG + G++ H ++ LD++ VG+
Sbjct: 375 ILVFRAMLEAGLEPTSVTLASVLPACDPVGGG----VYSGKQIHCFAVRRCLDTNVFVGT 430
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
AL+DMY K G I ++ VF KS +T +IS L +HG + + F M+ KG++P
Sbjct: 431 ALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKP 490
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
D++TFLS ++ C +G++ +G L+ SM + I +P H+ C+ D+L + GR+EEA E
Sbjct: 491 DAVTFLSAISACNYSGLVDEGLALYRSM-DSFGISATPQHHCCVADLLAKAGRVEEAYEF 549
Query: 517 V-GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP--AGSGSYVLMSNLYAEK 573
+ G G +++ SLL +C+ G E+ + + L+ +E +G VL+S + A +
Sbjct: 550 IEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIEKQYGHAGYSVLLSQVLAAE 609
Query: 574 GDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
+W LRK M+++G++KE G SW V + H F D + +E ++ +
Sbjct: 610 SNWNSADSLRKEMRARGLKKEAGSSWIKVQNAALEHKFIEKDQNYVENEHMFSI 663
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 208/678 (30%), Positives = 335/678 (49%), Gaps = 95/678 (14%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDD------ALSFALRMNLIGVVFDAVTYSTALSFCLD 69
IF+++ NP+ NT++ G+ + + F L N V D TY C
Sbjct: 82 IFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESN---VAADNYTYPILFQSCSI 138
Query: 70 HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAI 129
G + ++K G DS+VY+ N LI MY+ G L +AR+VFD D VSWN++
Sbjct: 139 RLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSM 198
Query: 130 LSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
L+GY G N+E K ++ +
Sbjct: 199 LAGYVLVG------------------------------------NVEEAKDVYDRMPE-- 220
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFK 244
+V N ++ + K +A K+F M ++++SW+ +IS E+A+ LFK
Sbjct: 221 --RNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFK 278
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
EM +G+ ++V + ++ A S +V G+++HGL +K + ++ N LI MY+ E
Sbjct: 279 EMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCE 338
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV----------------- 347
+ ++K+F E C + ISWN++ISGY + G + +A F
Sbjct: 339 EVVTAQKLFSESCCLDQISWNSMISGYVKCG-EIEKARALFDSMPDKDNVSWSAMISGYA 397
Query: 348 ----------------IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
I+ +KP+ SV++A +L G+ H++I K GL +
Sbjct: 398 QQDRFTETLVLFQEMQIEGTKPDETILVSVISA--CTHLAALDQGKWIHAYIRKNGLKIN 455
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
I+G+ L++MY K G + ++ VF +EK W A+I LA +G + + F EM+
Sbjct: 456 IILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKE 515
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
GV P+ ITF++VL C G++ +G F+SM++++ I P+ HY CMVD+LGR G L+
Sbjct: 516 HGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLK 575
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
EAEEL+ +P P +S +LLGAC+ +G+ E GERI L+++ P G VL+SN+YA
Sbjct: 576 EAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYA 635
Query: 572 EKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
KG+W V +R M+ GV K G S + +H F +GD THP++E I M + +
Sbjct: 636 SKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAH--GRVHEFLAGDKTHPQNEHIEHMLDEM 693
Query: 632 GSEMK---YLNSKRERAI 646
++K Y RE ++
Sbjct: 694 AKKLKLEGYAPDTREVSL 711
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 184/374 (49%), Gaps = 42/374 (11%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVT 59
++ K G ++A +FN + D+VSW+ ++S +E+++ +AL MN G++ D V
Sbjct: 232 LFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVV 291
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ LS C + G +H L+VK G+++ V + NALI MYS +V A+++F E
Sbjct: 292 VLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESC 351
Query: 120 NKDSVSWNAILSGYTQDG------------------------------DYGVEAILALIE 149
D +SWN+++SGY + G D E ++ E
Sbjct: 352 CLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQE 411
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M +G + D S SAC H L+ GK IH K G ++ +G L++ Y K
Sbjct: 412 MQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGC 471
Query: 210 TGDANKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
DA +VF+ + ++ V +W +I +MN + ++ F EM+ GV PN++TF+ ++ A
Sbjct: 472 VEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGA 531
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCN--CLITMYARFESMQDSEKVFDELS-CREI 321
LV EG I+ + + P++ + C++ + R ++++E++ + + ++
Sbjct: 532 CRHMGLVDEGHRHFNSMIQEHKIG-PNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDV 590
Query: 322 ISWNALISGYAQNG 335
+W AL+ + G
Sbjct: 591 STWGALLGACKKYG 604
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY K G + AL +F L + +WN ++ G + D +L M GV +
Sbjct: 463 INMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNE 522
Query: 58 VTYSTALSFCLDHEGFLFGLQLH--SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T+ L C H G + H S+I + + + ++ + R G L EA +
Sbjct: 523 ITFVAVLGAC-RHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELI 581
Query: 116 DEMPNKDSVS-WNAILSGYTQDGD 138
+ MP VS W A+L + GD
Sbjct: 582 ESMPMAPDVSTWGALLGACKKYGD 605
>gi|116310930|emb|CAH67868.1| B0403H10-OSIGBa0105A11.20 [Oryza sativa Indica Group]
Length = 804
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 197/654 (30%), Positives = 356/654 (54%), Gaps = 36/654 (5%)
Query: 1 MNMYCKSGQFDKALC-----IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIG 52
+N+Y S ++ +A +F+ + ++VSWNT+ + K+ +AL +RM G
Sbjct: 149 LNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDG 208
Query: 53 VVFDAVTYSTALSFCL-DHEGFLFGLQLHSLIVKFGLD--SEVYVGNALITMYSRWGRLV 109
V++ + D + F QL+ L+VK+G++ ++++V ++ I M+S +G +
Sbjct: 209 FRPTPVSFVNIFPAAVADDPSWPF--QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQ 266
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASA 168
ARRVFD K++ WN +++GY Q+G + EAI +++ + + LD V+F SA +A
Sbjct: 267 SARRVFDRAAKKNTEVWNTMITGYVQNGQFS-EAIDLFSKILGSREVPLDVVTFLSALTA 325
Query: 169 CGHEKNLELGKQIHGVSIK-MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
+++ LG+Q+HG IK M V +GN L+ YS+C A +F R+ ++++++
Sbjct: 326 ASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVT 385
Query: 228 WTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
W TM++ + + + L EM+ G + VT ++ A S ++ G+ HG I
Sbjct: 386 WNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLI 445
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL--SCREIISWNALISGYAQNGLSLAA 340
+ E + + LI MYA+ ++ +++VFD + R+ ++WNA+I+GY Q+G A
Sbjct: 446 RHGIEGE-GLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKA 504
Query: 341 VQAFFGVIKES-KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
+ F +++ +P + T SVL A VG + G++ H ++ LD++ VG+
Sbjct: 505 ILVFRAMLEAGLEPTSVTLASVLPACDPVGGG----VYSGKQIHCFAVRRCLDTNVFVGT 560
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
AL+DMY K G I ++ VF KS +T +IS L +HG + + F M+ KG++P
Sbjct: 561 ALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKP 620
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
D++TFLS ++ C +G++ +G L+ SM + I +P H+ C+ D+L + GR+EEA E
Sbjct: 621 DAVTFLSAISACNYSGLVDEGLALYRSM-DSFGISATPQHHCCVADLLAKAGRVEEAYEF 679
Query: 517 V-GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP--AGSGSYVLMSNLYAEK 573
+ G G +++ SLL +C+ G E+ + + L+ +E +G VL+S + A +
Sbjct: 680 IEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIEKQYGHAGYSVLLSQVLAAE 739
Query: 574 GDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
+W LRK M+++G++KE G SW V + H F D + +E ++ +
Sbjct: 740 SNWNSADSLRKEMRARGLKKEAGSSWIKVQNAALEHKFIEKDQNYVENEHMFSI 793
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 218/437 (49%), Gaps = 32/437 (7%)
Query: 104 RWGRLVEARRVFDE-MPNKD-SVSWNAILSGYT----QDGDYGVEAILALIEMMRKGLRL 157
+ GRL ARR+ E +P ++ NA+L Y Q+ + A+L R +R
Sbjct: 46 KQGRLDHARRLLLEALPRPPPTLLCNALLIAYADRALQEEALRLNALLN--HAARPPVRS 103
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS--VGNVLMSTYSKCEVTGDAN- 214
DH ++++A +AC + L LG+ +H ++ + + N L++ Y+ +A
Sbjct: 104 DHYTYSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARV 163
Query: 215 KVFRRMHD----RNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI 265
V RR+ D RNV+SW T+ + ++A+ LF M DG P V+F+ + A
Sbjct: 164 DVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPA- 222
Query: 266 SIGNLVKEGRMIHGLCIK--TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
++ + ++GL +K ++++ V + I M++ F +Q + +VFD + +
Sbjct: 223 AVADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEV 282
Query: 324 WNALISGYAQNGLSLAAVQAFFGVI--KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHS 381
WN +I+GY QNG A+ F ++ +E + TF S L A ++D+SL GQ+ H
Sbjct: 283 WNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSL--GQQLHG 340
Query: 382 HIIKVGLDSDPIV-GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG-DY 439
++IK + P++ G+AL+ MY + G++ + +F+ EK W +++A ++ D
Sbjct: 341 YLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDL 400
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC 499
E ++ + EM+ G DS+T +VL+ G + G+ +++ H S
Sbjct: 401 EGLLLVY-EMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIR--HGIEGEGLESY 457
Query: 500 MVDMLGRVGRLEEAEEL 516
++DM + GR+E A+ +
Sbjct: 458 LIDMYAKSGRVEMAQRV 474
>gi|302805298|ref|XP_002984400.1| hypothetical protein SELMODRAFT_120073 [Selaginella moellendorffii]
gi|300147788|gb|EFJ14450.1| hypothetical protein SELMODRAFT_120073 [Selaginella moellendorffii]
Length = 660
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/585 (29%), Positives = 314/585 (53%), Gaps = 24/585 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVV-FD 56
+NM+ S Q +A +F+ +N +IVSWN +LS + ++ ++ ++ +M V D
Sbjct: 81 INMFGGSSQACEARRVFDATHNKNIVSWNAMLSAYSQNGHFEETIALFKQMASTKTVKPD 140
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T+++ LS C + E G H+ V+ GL+ V V LI MYS+ L EAR +F
Sbjct: 141 KLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFS 200
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
P+ D V+W ++S Y Q+G EAI M + D V+F +A AC +NLE
Sbjct: 201 RSPSSDVVAWTVMISAYAQNGRPQ-EAIALFFRMT---VPPDGVAFATALGACASAENLE 256
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+ + +++G +V N ++ Y KC + ++F RM R+ +SW TM++
Sbjct: 257 AGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYA 316
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAI--SIGNL--VKEGRMIHGLCIKTNFL 287
+ ++ F+ M+L+GVCP++V+ + ++ S NL ++EG++ H ++
Sbjct: 317 RAGHTAGSLWCFRAMQLEGVCPSEVSLVSSFTSVLSSCANLENLREGKLAHAAAVEAGLE 376
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
V LI MY++ ++++ +F ++++W +IS YAQNG A+ FF +
Sbjct: 377 FAVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRI 436
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
P+ F + L A AE++ + I+++GLD++ V A+LD+YGK
Sbjct: 437 TV--PPDGVGFATALEACARAENL---EAGVVRAKIVELGLDAERAVADAVLDLYGKCAE 491
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
I E+ +F+ +++ +W +++A AR G + F+ M+ +GV P ++ +SVL+
Sbjct: 492 IVETAEIFDRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSVLST 551
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI-PGGPGL 526
G++ +G F S+ DY + PS + C+VD+LGR G AE+L+ + P
Sbjct: 552 YSHAGLVEQGCQCFASIASDYGMVPSREQQGCVVDLLGRAGSW-IAEDLIRVVAPSTSSS 610
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
+ +++L +CRIH +VE+G+ A +++M+P +++++SN+YA
Sbjct: 611 ELWKAVLSSCRIHSDVELGDCAAACVLEMDPGSDSAHIILSNIYA 655
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 253/512 (49%), Gaps = 32/512 (6%)
Query: 21 NNPDIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFDAVTYSTALSFCLDHEGFLFG 76
+ ++V+WN + S DA S AL+ + L G+V D VT+ A +
Sbjct: 3 DKTNVVTWNAFIRALASSRDA-SGALQTFRSLLLQGLVPDTVTFINASQGAKTPPEAKY- 60
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
L + + G+ ++ +GNALI M+ + EARRVFD NK+ VSWNA+LS Y+Q+
Sbjct: 61 --LETCRQESGVQLDIALGNALINMFGGSSQACEARRVFDATHNKNIVSWNAMLSAYSQN 118
Query: 137 GDYGVEAILALIEMM--RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
G + E +AL + M K ++ D ++F S S+C + +NL GK H +++ G V
Sbjct: 119 GHF--EETIALFKQMASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAV 176
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLD 249
V L+ YSKC +A +F R +V++WT MIS ++A++LF M
Sbjct: 177 PVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRMT-- 234
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
V P+ V F + A + ++ GR++ ++ +E +V N ++ +Y + + ++
Sbjct: 235 -VPPDGVAFATALGACASAENLEAGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVET 293
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF-----GVIKESKPNAYTFGSVLNA 364
++F + R+ +SWN +++ YA+ G + ++ F GV +F SVL++
Sbjct: 294 AEIFGRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSSFTSVLSS 353
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
E+ L+ G+ H+ ++ GL+ V + L+ MY K + E++ +F+ +
Sbjct: 354 CANLEN--LREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVV 411
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
AWT +ISA A++G + + F + V PD + F + L C R + G + +
Sbjct: 412 AWTVMISAYAQNGRPQEAIALFFRIT---VPPDGVGFATALEACARAENLEAG--VVRAK 466
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ + ++ ++D+ G+ + E E+
Sbjct: 467 IVELGLDAERAVADAVLDLYGKCAEIVETAEI 498
>gi|115460348|ref|NP_001053774.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|38344148|emb|CAE01824.2| OSJNBa0041A02.15 [Oryza sativa Japonica Group]
gi|113565345|dbj|BAF15688.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|125549608|gb|EAY95430.1| hypothetical protein OsI_17272 [Oryza sativa Indica Group]
Length = 804
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 197/654 (30%), Positives = 356/654 (54%), Gaps = 36/654 (5%)
Query: 1 MNMYCKSGQFDKALC-----IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIG 52
+N+Y S ++ +A +F+ + ++VSWNT+ + K+ +AL +RM G
Sbjct: 149 LNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDG 208
Query: 53 VVFDAVTYSTALSFCL-DHEGFLFGLQLHSLIVKFGLD--SEVYVGNALITMYSRWGRLV 109
V++ + D + F QL+ L+VK+G++ ++++V ++ I M+S +G +
Sbjct: 209 FRPTPVSFVNIFPAAVADDPSWPF--QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQ 266
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASA 168
ARRVFD K++ WN +++GY Q+G + EAI +++ + + LD V+F SA +A
Sbjct: 267 SARRVFDRAAKKNTEVWNTMITGYVQNGQFS-EAIDLFSKILGSREVPLDVVTFLSALTA 325
Query: 169 CGHEKNLELGKQIHGVSIK-MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
+++ LG+Q+HG IK M V +GN L+ YS+C A +F R+ ++++++
Sbjct: 326 ASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVT 385
Query: 228 WTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
W TM++ + + + L EM+ G + VT ++ A S ++ G+ HG I
Sbjct: 386 WNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLI 445
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL--SCREIISWNALISGYAQNGLSLAA 340
+ E + + LI MYA+ ++ +++VFD + R+ ++WNA+I+GY Q+G A
Sbjct: 446 RHGIEGE-GLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKA 504
Query: 341 VQAFFGVIKES-KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
+ F +++ +P + T SVL A VG + G++ H ++ LD++ VG+
Sbjct: 505 ILVFRAMLEAGLEPTSVTLASVLPACDPVGGG----VYSGKQIHCFAVRRCLDTNVFVGT 560
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
AL+DMY K G I ++ VF KS +T +IS L +HG + + F M+ KG++P
Sbjct: 561 ALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKP 620
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
D++TFLS ++ C +G++ +G L+ SM + I +P H+ C+ D+L + GR+EEA E
Sbjct: 621 DAVTFLSAISACNYSGLVDEGLALYRSM-DSFGISATPQHHCCVADLLAKAGRVEEAYEF 679
Query: 517 V-GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP--AGSGSYVLMSNLYAEK 573
+ G G +++ SLL +C+ G E+ + + L+ +E +G VL+S + A +
Sbjct: 680 IEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIEKQYGHAGYSVLLSQVLAAE 739
Query: 574 GDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
+W LRK M+++G++KE G SW V + H F D + +E ++ +
Sbjct: 740 SNWNSADSLRKEMRARGLKKEAGSSWIKVQNAALEHKFIEKDQNYVENEHMFSI 793
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 215/435 (49%), Gaps = 28/435 (6%)
Query: 104 RWGRLVEARRVFDE-MPNKD-SVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDH 159
+ GRL ARR+ E +P ++ NA+L Y + + L R +R DH
Sbjct: 46 KQGRLDHARRLLLEALPRPPPTLLCNALLIAYAARALPEEALRLYALLNHAARPPVRSDH 105
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS--VGNVLMSTYSKCEVTGDAN-KV 216
++++A +AC + L LG+ +H ++ + + N L++ Y+ +A V
Sbjct: 106 YTYSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDV 165
Query: 217 FRRMHD----RNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISI 267
RR+ D RNV+SW T+ + ++A+ LF M DG P V+F+ + A ++
Sbjct: 166 VRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPA-AV 224
Query: 268 GNLVKEGRMIHGLCIK--TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWN 325
+ ++GL +K ++++ V + I M++ F +Q + +VFD + + WN
Sbjct: 225 ADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWN 284
Query: 326 ALISGYAQNGLSLAAVQAFFGVI--KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
+I+GY QNG A+ F ++ +E + TF S L A ++D+SL GQ+ H ++
Sbjct: 285 TMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSL--GQQLHGYL 342
Query: 384 IKVGLDSDPIV-GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG-DYES 441
IK + P++ G+AL+ MY + G++ + +F+ EK W +++A ++ D E
Sbjct: 343 IKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEG 402
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
++ + EM+ G DS+T +VL+ G + G+ +++ H S ++
Sbjct: 403 LLLVY-EMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIR--HGIEGEGLESYLI 459
Query: 502 DMLGRVGRLEEAEEL 516
DM + GR+E A+ +
Sbjct: 460 DMYAKSGRVEMAQRV 474
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 286/555 (51%), Gaps = 20/555 (3%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+ + I+ G Y+ L+T+ + R+ AR++FD++P+ + WN++ GY Q
Sbjct: 119 QIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSE 178
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
Y E + +M +R + +F +CG L G+Q+H IK G+ + VG
Sbjct: 179 SYR-EVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVG 237
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEMRLDGVCP-NDV 256
L+ YS GDA K+F M +RNV++WT+MI+ A L RL + P DV
Sbjct: 238 TTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSA-DLVSARRLFDLAPERDV 296
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS----VCNCLITMYARFESMQDSEKV 312
++ I + ++ G M+ + F P+ N ++ YA +++ E +
Sbjct: 297 ----VLWNIMVSGYIEGGDMVEA---RKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGL 349
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAED 370
F+E+ R I SWNALI GYA NGL + +F ++ ES PN T +VL+A A
Sbjct: 350 FEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSA--CARL 407
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+L G+ H + GL + VG+AL+DMY K G I + VF K +W +I
Sbjct: 408 GALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLI 467
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
LA H +N F +M+N G +PD ITF+ +L C G++ G F SM DY I
Sbjct: 468 GGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLI 527
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIAD 550
P +HY CMVDML R GRLE+A V ++P + LLGACRI+ NVE+ E
Sbjct: 528 MPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQ 587
Query: 551 ALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHG 610
L+++EP +YV++SN+Y + G WE VA L+ M+ G +K G S +V D +
Sbjct: 588 RLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVN--DAVVE 645
Query: 611 FSSGDNTHPRSEEIY 625
F S D HP+ EEIY
Sbjct: 646 FYSLDERHPQIEEIY 660
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 191/466 (40%), Gaps = 112/466 (24%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F+ + +P+I WN++ G+ +S+ + + +M + + + T+ L C
Sbjct: 155 LFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINA 214
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR------------------------- 107
+ G Q+H ++K G +VG LI MYS G
Sbjct: 215 LIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMING 274
Query: 108 ------LVEARRVFD-------------------------------EMPNKDSVSWNAIL 130
LV ARR+FD EMPN+D + WN +L
Sbjct: 275 YILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVL 334
Query: 131 SGYTQDGDYGVEAILALIEMMRK----------------GLRLD---------------- 158
GY +G+ VEA+ L E M + GL +
Sbjct: 335 KGYATNGN--VEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPP 392
Query: 159 -HVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
+ + SAC L+LGK +H + G +V VGN LM Y+KC + +A VF
Sbjct: 393 NDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVF 452
Query: 218 RRMHDRNVISWTTMI---SMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
R M +++ISW T+I +M+ DA++LF +M+ G P+ +TFIG++ A + LV+
Sbjct: 453 RGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVE 512
Query: 273 EGRMIHGLCIKTNFLSEPSV--CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALIS 329
+G + + ++L P + C++ M AR ++ + ++ + + W L+
Sbjct: 513 DG-FAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLG 571
Query: 330 G---YAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDIS 372
Y L+ A+Q + ++ N ++ G ED++
Sbjct: 572 ACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVA 617
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
K+ I I F + L+T+ A + M + ++FD++ I WN++ GY
Sbjct: 115 KQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGY 174
Query: 332 AQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
AQ+ V FF + + +PN +TF VL + G +L G++ H +IK G
Sbjct: 175 AQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKIN--ALIEGEQVHCFLIKCGFRG 232
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
+P VG+ L+DMY G++ ++ ++F E E++ AWT++I+ D S F
Sbjct: 233 NPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFD--- 289
Query: 451 NKGVRPDSITFLSVLTVCG--RNGMIHKGRHLFDSM 484
+ P+ L + V G G + + R LF M
Sbjct: 290 ---LAPERDVVLWNIMVSGYIEGGDMVEARKLFXEM 322
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
M+MY K G + A+ +F ++ D++SWNT++ G + DAL+ +M G D
Sbjct: 436 MDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDG 495
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
+T+ L C L +GF + S+ + + ++ ++ M +R GRL +A
Sbjct: 496 ITFIGILCACTHMGLVEDGFAY---FQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXA 552
Query: 114 VFDEMP-NKDSVSWNAIL 130
+MP D V W +L
Sbjct: 553 FVRKMPVEADGVIWAGLL 570
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 51/113 (45%)
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
K + + II G + + L+ + + ++++F++ + + W ++
Sbjct: 115 KQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGY 174
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
A+ Y V+ F +M+ +RP+ TF VL CG+ + +G + ++K
Sbjct: 175 AQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIK 227
>gi|222632692|gb|EEE64824.1| hypothetical protein OsJ_19680 [Oryza sativa Japonica Group]
Length = 688
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 211/646 (32%), Positives = 327/646 (50%), Gaps = 30/646 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
+ +S + A +F+ + D V++ T+L+G + D F M L F +
Sbjct: 32 LKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGD---FPGAMAL----FSRLRA 84
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S+ D F+ L S D+ A + ++ G L A +VFDEMP+
Sbjct: 85 SSPPLAPAD--PFVLSLVFKSCAA--AADARFLPHAASLHAFAA-GCLGLALKVFDEMPH 139
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
K+ VSW +++ T+ G EA+ EM G+ D ++ +A +AC L G++
Sbjct: 140 KNVVSWTTLVASLTRAGRRH-EALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGRE 198
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----N 235
+H K+G + V N L + Y++C A RM R+V +WTT+IS
Sbjct: 199 VHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQTGR 258
Query: 236 REDAVSLFKEMRLD----GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++A+ F M + PN+ T+ +I A + V G +H + F S
Sbjct: 259 AKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACARS 318
Query: 292 VCNCLITMYARFES-MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N L+T+Y R + ++ VF E ++++SW+A+ISGYAQ GL+ A F +
Sbjct: 319 VANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHH 378
Query: 351 S---KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
S +PN +T S+L+ A SL G++ H+ + GL+ ++ SAL+DMYGK GS
Sbjct: 379 SGCPRPNEFTLASLLSVCATAA--SLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGS 436
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ VF+ + +WTA+I A HG + + F+EM + G++PD +TF+ VL
Sbjct: 437 MLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNA 496
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G + G + M + Y + P+ +HY C+VD+LGR GR+ EAEEL+G+I
Sbjct: 497 CCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGKIAANERDG 556
Query: 528 VL-QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V+ SLL AC G E G++ A+ M+ EP G+G++V M+NLYA KG W A R M
Sbjct: 557 VVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYASKGQWHEAAQERHMM 616
Query: 587 KSKGVRKEVGFSWADVGDIDGLHG-FSSGDNTHPRSEEIYRMAECL 631
K KGV K G+S VG G F + D THP+ IYRM E +
Sbjct: 617 KQKGVVKGAGWSSITVGGEGRRVGVFVASDRTHPQDSAIYRMLELI 662
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 201/431 (46%), Gaps = 32/431 (7%)
Query: 97 ALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR 156
A + +R RL +A R+FD MP +D V++ +L+G+ GD+ +AL +R
Sbjct: 30 ARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDF--PGAMALFSRLRA--- 84
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
+S A L L + + + H + L + + C G A KV
Sbjct: 85 ------SSPPLAPADPFVLSLVFKSCAAAADARFLPHAA---SLHAFAAGC--LGLALKV 133
Query: 217 FRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F M +NV+SWTT+++ R +A+ F EMR GV + + + A + L+
Sbjct: 134 FDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLL 193
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
GR +H C K S P V N L T+YAR + + + R++ +W +IS Y
Sbjct: 194 SRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAY 253
Query: 332 AQNGLSLAAVQAFFGVIKE-----SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
Q G + A++AF +++E + PN YT+ +V+ A + L G++ H+ +
Sbjct: 254 VQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCL--GEQLHAQAARK 311
Query: 387 GLDSDPIVGSALLDMYGK-RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
G V ++L+ +Y + G + + VF E+ K +W+AIIS A+ G E
Sbjct: 312 GFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFAL 371
Query: 446 FKEMENKG--VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
F+EM + RP+ T S+L+VC + GR L ++ +E S ++DM
Sbjct: 372 FREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLH-TLAVAAGLEHHAMIRSALIDM 430
Query: 504 LGRVGRLEEAE 514
G+ G + +A+
Sbjct: 431 YGKSGSMLDAD 441
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 309/552 (55%), Gaps = 22/552 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K G A +F+ + ++VSW +V++G+ ++ +AL F +M GV+ D
Sbjct: 105 LNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQ 164
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + + C G QLH+ ++K + + NALI+MY++ +++A VF
Sbjct: 165 FTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSR 224
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL-DHVSFTSAASACGHEKNLE 176
M +D +SW ++++G++Q G Y +EA+ EM+ +G+ L + F S SAC E
Sbjct: 225 MATRDLISWGSMIAGFSQLG-YELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPE 283
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G+Q+HG+SIK G G V G L Y+KC + A VF ++ ++++W +I+
Sbjct: 284 YGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFA 343
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ ++A++ F +MR G+ P+++T L+ A + + + +G +HG K +
Sbjct: 344 YGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVP 403
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAFFGVIK- 349
VCN L+TMYA+ ++D+ F+E+ C +++SWNA+++ + + FG++K
Sbjct: 404 VCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHD----QAEEVFGLLKL 459
Query: 350 ----ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ +P+ T +VL A +AE +S++ G + H + +K GL+ D V + L+D+Y K
Sbjct: 460 MCISQHRPDYITLTNVLGA--SAETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKC 517
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GS+ ++++F+ +W+++I A+ G E + FK M V+P+ +TF+ VL
Sbjct: 518 GSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVL 577
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
T C G++ +G L+ +M K++ I P+ +H SCMVD+L R G L EAE + Q+ P
Sbjct: 578 TACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAFDPD 637
Query: 526 LSVLQSLLGACR 537
+ V ++LL AC+
Sbjct: 638 IVVWKTLLAACK 649
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 247/502 (49%), Gaps = 23/502 (4%)
Query: 28 WNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG 87
+N + FE F L ++ + A +Y +L +H G ++H ++K
Sbjct: 43 FNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSL----EH-----GRKIHDHMLKSK 93
Query: 88 LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
++ + N ++ MY + G L +A++VFD MP ++ VSW ++++GY+Q+G G A+
Sbjct: 94 SHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQ-GGNALEFY 152
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
+M++ G+ D +F S AC ++ LG+Q+H +K +G H+ N L+S Y+K
Sbjct: 153 FQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKS 212
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGV-CPNDVTFIGL 261
V DA VF RM R++ISW +MI+ + +A+ FKEM GV PN+ F +
Sbjct: 213 NVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSV 272
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
A S + GR +HG+ IK + L MYA+ + + VF ++ ++
Sbjct: 273 FSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDL 332
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRC 379
++WNA+I+G+A G + A+ AFF ++ P+ T S+L A + + L G +
Sbjct: 333 VAWNAIIAGFAYGGDAKEAI-AFFSQMRHQGLIPDEITVRSLLCACTSPSE--LYQGMQV 389
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF-AWTAIISALARHGD 438
H +I K+GLD D V + LL MY K + ++ F E + ++ +W AI++A H
Sbjct: 390 HGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQ 449
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS 498
E V K M RPD IT +VL I G + LK + +
Sbjct: 450 AEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKT-GLNCDISVTN 508
Query: 499 CMVDMLGRVGRLEEAEELVGQI 520
++D+ + G L+ A ++ +
Sbjct: 509 GLIDLYAKCGSLKTARKIFDSV 530
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 154/300 (51%), Gaps = 7/300 (2%)
Query: 238 DAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
+A+ F+ + + G C T+ LI A S ++ GR IH +K+ + ++ N +
Sbjct: 45 EAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHI 104
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
+ MY + S++D++KVFD + R ++SW ++I+GY+QNG A++ +F +++ P+
Sbjct: 105 LNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQ 164
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
+TFGS++ A + DI L G++ H+H++K + I +AL+ MY K I ++ VF
Sbjct: 165 FTFGSIIKACSSLGDIGL--GRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVF 222
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR-PDSITFLSVLTVCGRNGMI 474
+ + +W ++I+ ++ G + FKEM ++GV P+ F SV + C
Sbjct: 223 SRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQP 282
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
GR L +K + + + DM + G L A + QI G P L +++
Sbjct: 283 EYGRQLHGMSIK-FGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQI-GRPDLVAWNAIIA 340
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 4/185 (2%)
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVL 362
F + E V +L + S N I+ + L A++AF +++ T +
Sbjct: 11 FATNNVKETVLSKLRAEQ--SSNEYITTLCKQKLFNEAIKAF-EFLQKKTGFCLTLSTYA 67
Query: 363 NAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
+ A + SL+HG++ H H++K D + + +L+MYGK GS+ ++Q+VF+ E+
Sbjct: 68 YLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPER 127
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+ +WT++I+ +++G + + + +M GV PD TF S++ C G I GR L
Sbjct: 128 NVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLH 187
Query: 482 DSMLK 486
+LK
Sbjct: 188 AHVLK 192
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 273/482 (56%), Gaps = 12/482 (2%)
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR 219
VS A + CG ++ LG+ +HG +K + N L+ Y+KC V A VF
Sbjct: 2 VSILQACANCG---DVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDL 58
Query: 220 MHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
M R V++WT++I+ ++A+ LF EM +GV P+ T ++HA + ++ G
Sbjct: 59 MSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
+ +H + + S VCN L+ MYA+ SM+D+ VF E+ ++IISWN +I GY++N
Sbjct: 119 KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN 178
Query: 335 GLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
L A+ F ++ E KP+ T +L A A SL G+ H HI++ G SD V
Sbjct: 179 SLPNEALSLFGDMVLEMKPDGTTLACILPA--CASLASLDRGKEVHGHILRNGFFSDQQV 236
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
+AL+DMY K G ++ +F+ K WT +I+ HG + + F EM G+
Sbjct: 237 ANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGI 296
Query: 455 RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
PD ++F+S+L C +G++ +G F+ M + +++P +HY+C+VD+L R G+L A
Sbjct: 297 EPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAY 356
Query: 515 ELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKG 574
+ + +P P ++ +LL CRIH +V++ E++A+ + ++EP +G YVL++N YAE
Sbjct: 357 KFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAE 416
Query: 575 DWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSE 634
WE V LR+ + +G++K G SW +V +H F +G+++HP++++I + + L S+
Sbjct: 417 KWEEVKKLRQKIGRRGLKKNPGCSWIEVK--SKVHIFLAGNSSHPQAKKIEVLLKRLRSK 474
Query: 635 MK 636
MK
Sbjct: 475 MK 476
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 180/340 (52%), Gaps = 12/340 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G D A+ +F+ ++ +V+W ++++ + + SD+A+ M+ GV D
Sbjct: 40 LDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDI 99
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +T L C + G +H+ I + + S ++V NAL+ MY++ G + +A VF E
Sbjct: 100 FTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLE 159
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP KD +SWN ++ GY+++ EA L+L M ++ D + AC +L+
Sbjct: 160 MPVKDIISWNTMIGGYSKNS-LPNEA-LSLFGDMVLEMKPDGTTLACILPACASLASLDR 217
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
GK++HG ++ G+ + V N L+ Y KC V A +F + +++I+WT MI+ M
Sbjct: 218 GKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGM 277
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEPS 291
+ +A++ F EMR G+ P++V+FI +++A S L+ EG R + + + N +
Sbjct: 278 HGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLE 337
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISG 330
C++ + AR + + K + + W AL+SG
Sbjct: 338 HYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG 377
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 219/485 (45%), Gaps = 64/485 (13%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
L C + G +H VK + + N L+ MY++ G L A VFD M +
Sbjct: 5 LQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTV 64
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
V+W ++++ Y ++G EAI EM R+G+ D + T+ AC +LE GK +H
Sbjct: 65 VTWTSLIAAYAREG-LSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMNR--ED 238
+ +++ V N LM Y+KC DAN VF M +++ISW TMI S N +
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183
Query: 239 AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
A+SLF +M L+ + P+ T ++ A + + G+ +HG ++ F S+ V N L+
Sbjct: 184 ALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVD 242
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYT 357
MY + + +FD + +++I+W +I+GY +G A+ F + + +P+ +
Sbjct: 243 MYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVS 302
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
F S+L A SH S LLD E R FN
Sbjct: 303 FISILYAC---------------SH-------------SGLLD---------EGWRFFNV 325
Query: 418 TQEKSEFA-----WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
Q++ + I+ LAR G + +K +++ + PD+ + ++L+ C
Sbjct: 326 MQDECNVKPKLEHYACIVDLLARSG---KLAMAYKFIKSMPIEPDATIWGALLSGC---- 378
Query: 473 MIHKGRHLFDSMLKD-YHIEP-SPDHYSCMVDMLGRVGRLEEAEELVGQI-----PGGPG 525
IH L + + + + +EP + +Y + + + EE ++L +I PG
Sbjct: 379 RIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPG 438
Query: 526 LSVLQ 530
S ++
Sbjct: 439 CSWIE 443
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 195/607 (32%), Positives = 324/607 (53%), Gaps = 47/607 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTA 63
+CKSG + AL + N+++ D R+N + Y++
Sbjct: 34 FCKSGLLNDALHLLNSIDLYDS---------------------RIN------KPLLYASL 66
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR-LVEARRVFDEMPNKD 122
L C+ + F G Q H+ +VK GL+++ +VGN+L+++Y + G + RRVFD + KD
Sbjct: 67 LQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKD 126
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSW ++++GY ++G G+ AI +M+ G+ + + ++ AC NL LGK H
Sbjct: 127 VVSWASMITGYVREGKSGI-AIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFH 185
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR----E 237
GV ++ G+ ++ + + L+ Y + V+ DA ++F + + + + WTT+IS R E
Sbjct: 186 GVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYE 245
Query: 238 DAVSLFK-EMRLDGVCPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLSEPSVCN 294
+A+ F + R +CP++ TF ++ A GNL +++G IH I F +
Sbjct: 246 EALGFFYLKHRAHRLCPDNYTFGSVLTAC--GNLGRLRQGEEIHAKVIAYGFSGNVVTES 303
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP- 353
L+ MY + +++ S+++FD +S R +SW+AL++ Y NG AV F +E K
Sbjct: 304 SLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLF----REMKEV 359
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ Y+FG+V+ A ++ G+ H I+ G D IV SAL+D+Y K G I + R
Sbjct: 360 DLYSFGTVIRACAGLAAVT--PGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYR 417
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF+ ++ W ++I A++G + F+ M +G++PD I+F+ +L C G+
Sbjct: 418 VFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGL 477
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ + RH FD M Y I+P +HY+CMVD+LGR G LEEAE L+ S+ LL
Sbjct: 478 VDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLL 537
Query: 534 GACRIH-GNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
GAC N ERIA LM++EP SYV ++N+Y G W+ +R+ MK++ ++
Sbjct: 538 GACTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLK 597
Query: 593 KEVGFSW 599
K G SW
Sbjct: 598 KMPGQSW 604
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 194/386 (50%), Gaps = 22/386 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSF-ALRMNLIGVVFD 56
++MY ++ A +F+ L PD V W TV+S F ++D +AL F L+ + D
Sbjct: 204 IDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPD 263
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ + L+ C + G ++H+ ++ +G V ++L+ MY + G + +++R+FD
Sbjct: 264 NYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFD 323
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M N++SVSW+A+L+ Y +GDY E + L M++ +D SF + AC +
Sbjct: 324 RMSNRNSVSWSALLAVYCHNGDY--EKAVNLFREMKE---VDLYSFGTVIRACAGLAAVT 378
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
GK+IH I+ G V V + L+ Y+KC A +VF RM RN+I+W +MI
Sbjct: 379 PGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFA 438
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ A+ +F+ M +G+ P+ ++FIGL+ A S LV + R L + + +P
Sbjct: 439 QNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDL-MTGKYGIKPG 497
Query: 292 V--CNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNGLSLAAVQAFFGVI 348
V NC++ + R ++++E + + CR S W L+ + A + +
Sbjct: 498 VEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSATAERIAKKL 557
Query: 349 KESKPNAYT----FGSVLNAVGAAED 370
E +P Y +V AVG +D
Sbjct: 558 MELEPQCYLSYVHLANVYRAVGRWDD 583
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 198/654 (30%), Positives = 328/654 (50%), Gaps = 49/654 (7%)
Query: 28 WNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIV 84
+N+++ G+ S ++A+ LRM G+ D T+ LS C G+Q+H LIV
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 85 KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAI 144
K G +++V N+L+ Y+ G L AR+VFDEM ++ VSW +++ GY + D+ +A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR-DFAKDAV 220
Query: 145 LALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
M+R + + + V+ SAC ++LE G++++ G + + + L+
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMIS------MNREDAVSLFKEMRLDGVCPNDVT 257
Y KC A ++F N+ M S + RE A+ +F M GV P+ ++
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE-ALGVFNLMMDSGVRPDRIS 339
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
+ I + S + G+ HG ++ F S ++CN LI MY + + ++FD +S
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 318 CREIISWNALISGYAQNG-------------------------------LSLAAVQAFFG 346
+ +++WN++++GY +NG L A++ F
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 347 VIKESKPNA--YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ + NA T S+ +A G + L + + +I K G+ D +G+ L+DM+ +
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDL--AKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + +FN + AWTA I A+A G+ E + F +M +G++PD + F+
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
LT C G++ +G+ +F SMLK + + P HY CMVD+LGR G LEEA +L+ +P P
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ SLL ACR+ GNVEM A+ + + P +GSYVL+SN+YA G W +A +R
Sbjct: 638 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 697
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
MK KG+RK G S + H F+SGD +HP I M + + +L
Sbjct: 698 SMKEKGLRKPPGTSSIQIR--GKTHEFTSGDESHPEMPNIEAMLDEVSQRASHL 749
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 223/484 (46%), Gaps = 47/484 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRM-NLIGVVFD 56
++ Y + G+ D A +F+ ++ ++VSW +++ G+ + D DA+ RM V +
Sbjct: 176 VHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPN 235
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+VT +S C E G ++++ I G++ + +AL+ MY + + A+R+FD
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E + NA+ S Y + G EA+ MM G+R D +S SA S+C +N+
Sbjct: 296 EYGASNLDLCNAMASNYVRQG-LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 354
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH--------------- 221
GK HG ++ G+ + ++ N L+ Y KC A ++F RM
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 222 ----------------DRNVISWTTMIS-----MNREDAVSLFKEMR-LDGVCPNDVTFI 259
++N++SW T+IS E+A+ +F M+ +GV + VT +
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
+ A + + I+ K + + L+ M++R + + +F+ L+ R
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQR 378
++ +W A I A G + A++ F +I++ KP+ F L A + + G+
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLV--QQGKE 592
Query: 379 CHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFES-QRVFNETQEKSEFAWTAIISALARH 436
++K+ G+ + + ++D+ G+ G + E+ Q + + E ++ W ++++A
Sbjct: 593 IFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQ 652
Query: 437 GDYE 440
G+ E
Sbjct: 653 GNVE 656
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWN---TVLSGFEKSDDALSFALRMNLIGVVFDA 57
++M+ + G + A+ IFN+L N D+ +W ++ ++ A+ M G+ D
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 58 VTYSTALSFCLDHEGFLFGLQ--LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
V + AL+ C H G + + +S++ G+ E ++ + R G L EA ++
Sbjct: 572 VAFVGALTAC-SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 116 DEMP-NKDSVSWNAILSGYTQDGD-----YGVEAILAL 147
++MP + V WN++L+ G+ Y E I L
Sbjct: 631 EDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 200/651 (30%), Positives = 349/651 (53%), Gaps = 20/651 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY G FD +F+ + ++ W T+++G ++ ++ L +M+L GV +
Sbjct: 201 VHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANE 260
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY + + C + + G + + I++ S + +LI++Y + G L A+ + +
Sbjct: 261 VTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEH 320
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D V+WNA+++ Q+GD EAI L M +G + V++ S AC + + L
Sbjct: 321 MYQRDVVAWNAMVTACAQNGD-NWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQ 379
Query: 178 GKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G++IH + G V+VGN +++ Y KC T A VF M ++ +SW +I+ +
Sbjct: 380 GREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASV 439
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL-SEP 290
+DA+ LF M L+G+ N+ T + L+ A +K R IH F +
Sbjct: 440 GNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNST 499
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ--NGLSLAAVQAFFGVI 348
+V N ++ MYAR S+ D++K FD L + +++W+ +++ YAQ +G A + F +
Sbjct: 500 AVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEME 559
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRG 406
E KP TF S L+A A +L+HG+ H G +++ ++G+ +++MYGK G
Sbjct: 560 AEGIKPGEVTFVSALDACAAMA--TLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCG 617
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
S +++ VF++ EK +W ++I A A +G ++ +EM +G PDS T +S+L
Sbjct: 618 SPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILY 677
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
G++ +G F S ++D+ +EPS C+VD+L R G L+ AEEL+ P
Sbjct: 678 GLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQAD 737
Query: 527 SVL-QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
++ +LL AC+ +G+ + G R A+ + ++EP SGS+V+++NLYA G W + +RK
Sbjct: 738 TIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKM 797
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
M+ V+KE G SW ++ +H F SG++ HP+ EI E L M+
Sbjct: 798 MERMSVKKEPGCSWIELS--GSVHEFISGESKHPKIREICEDLEKLTLRMR 846
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/523 (28%), Positives = 263/523 (50%), Gaps = 13/523 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
MY K + AL +F+ ++ ++ SW +++ + ++ +AL RM G D V
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ AL C G Q+HS +V GL S + + N+L+ MY + + A +VFD M
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D VSW A+L+ Y Q+G + +A+ L M +G++ + V+F + C + L+LG+
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWS-QALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN- 235
+IH I G +GN L+ Y C D VF RM +V+ WTTMI S N
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239
Query: 236 -REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
E+ + +F++M L+GV N+VT++ ++ + VKEG MI +++ F S +
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLAT 299
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
LI++Y + + ++ + + + R++++WNA+++ AQNG + A+ + E
Sbjct: 300 SLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGA 359
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQ 412
N T+ SVL A E +L G+ H+ ++ G L + VG++++ MYGK G +
Sbjct: 360 NKVTYLSVLEACANLE--ALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAM 417
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
VF K + +W A+I+A + ++ + F ME +G+R + T LS+L CG
Sbjct: 418 SVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLE 477
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+ R + S + +V+M R G L +A++
Sbjct: 478 DLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKK 520
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/533 (26%), Positives = 265/533 (49%), Gaps = 14/533 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY K A +F+ + D+VSW +L+ + ++ AL RM+ GV +
Sbjct: 100 VNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQ 159
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+ T + C G ++H I+ GL+ + +GNAL+ MY G + + VF
Sbjct: 160 VTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSR 219
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + W +++G +Q+G Y E +L +M +G++ + V++ S C + ++
Sbjct: 220 MGQSSVLLWTTMIAGCSQNGQYE-EGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKE 278
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G+ I ++ + + + L+S Y +C + A + M+ R+V++W M++ +
Sbjct: 279 GEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQ 338
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS-EPS 291
+A+ L + M ++G N VT++ ++ A + + +GR IH + L E +
Sbjct: 339 NGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVA 398
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N +ITMY + + + VF+ + ++ +SWNA+I+ N A++ F G+ E
Sbjct: 399 VGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEG 458
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ N +T S+L A G ED+ L + G +S VG+++++MY + GS+ +
Sbjct: 459 LRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTA-VGNSVVNMYARCGSLLD 517
Query: 411 SQRVFNETQEKSEFAWTAIISALA--RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+++ F+ +EK AW+ I++A A + G F+EME +G++P +TF+S L C
Sbjct: 518 AKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDAC 577
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ GR + +E S + +++M G+ G +A+ + Q+P
Sbjct: 578 AAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMP 630
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 172/320 (53%), Gaps = 9/320 (2%)
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTF 258
Y KC DA VF + +NV SWT M++ + +A+ LF M+ +G P+ V F
Sbjct: 2 YGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVF 61
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC 318
+ + A + + GR IH + + S + N L+ MY + + + +EKVFD +
Sbjct: 62 VIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLL 121
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQ 377
R+++SW A+++ YAQNG A++ + E KPN TF ++++ + L G+
Sbjct: 122 RDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDL--GR 179
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
+ H II GL+ D I+G+AL+ MYG GS + + VF+ + S WT +I+ +++G
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
YE + F++M+ +GV+ + +T++S++ VC RN K + D+ + + S
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVC-RNLDAVKEGEMIDARILESPFCSSTLLA 298
Query: 498 SCMVDMLGRVGRLEEAEELV 517
+ ++ + G+ G L+ A+ L+
Sbjct: 299 TSLISLYGQCGILDRAKGLL 318
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/576 (30%), Positives = 310/576 (53%), Gaps = 24/576 (4%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H+ I+K G ++ V +L+ +Y++ G + AR++FD + ++ V+W A+++GY Q+
Sbjct: 96 IHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVAWTALMTGYVQNSQ 155
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+ AI +M+ G + + A +AC +++LGKQ+H IK S+GN
Sbjct: 156 PNI-AIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIKYKLDYDPSIGN 214
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDA-----VSLFKEMRLDGVCP 253
L S YSK + VF+ + ++NVISWT +IS E+ + F EM L+ + P
Sbjct: 215 ALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEMLLEDIKP 274
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
N+ T ++ + + GR++H L IK + + N ++ +Y + M +++ +F
Sbjct: 275 NEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILF 334
Query: 314 DELSCREIISWNALISGYAQNGLSLA------------AVQAFFGVIKE-SKPNAYTFGS 360
++ +++WNA+ISG+AQ + LA A+ F + + KP+ +T S
Sbjct: 335 HKMGSTNLVTWNAMISGHAQ-AMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSS 393
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
VL +L G++ H+ IK G SD +VG+AL++MY K GSI ++ + F E
Sbjct: 394 VLTVCSRLS--ALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMST 451
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
++ +WT +I+ LA+HG E + F++M GVRP+ ITF+ VL C +GM+ +
Sbjct: 452 RTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDEALGY 511
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
F+ M K+Y I+P DHY C++ M ++ RL+EA +++ ++ P + L+ CR G
Sbjct: 512 FEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIAGCRNLG 571
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
E+G A+ L+K++ + +YV + N+Y W+ V+ +RK MK + + K +SW
Sbjct: 572 KQELGFYAAEQLLKLKLKDTETYVTLLNMYISAKRWQDVSRVRKLMKEEKLGKFNDWSWI 631
Query: 601 DVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ + +H F + HP + ++Y + E L + K
Sbjct: 632 TIK--EKIHSFKTTGRLHPHNAKMYELLEELLDKAK 665
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 232/473 (49%), Gaps = 47/473 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFALRMNLI--GVVFDA 57
+N+Y K G A IF++L+ ++V+W +++G+ + S ++ + +++ G +
Sbjct: 116 VNVYAKCGAMGNARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSN 175
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T AL+ C G QLH+ ++K+ LD + +GNAL ++YS+ G L + VF
Sbjct: 176 YTLGIALNACSAINSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQS 235
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ K+ +SW A++S ++G + + EM+ + ++ + + T+ S C L L
Sbjct: 236 IGEKNVISWTAVISACGENGKAAM-GLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVL 294
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
G+ +H +SIK+GY ++ + N +M Y KC +A +F +M N+++W MIS
Sbjct: 295 GRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQ 354
Query: 234 ---MNRED---------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+ ++D A+S+F E+ G P+ T ++ S + + +G +H
Sbjct: 355 AMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQT 414
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IK+ +LS+ V L+ MY++ S+ + K F E+S R +ISW +I+G AQ+G S A+
Sbjct: 415 IKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQAL 474
Query: 342 QAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG----- 395
Q F + + +PN TF VL A CHS ++ L ++
Sbjct: 475 QLFEDMRLAGVRPNQITFVGVLAAC-------------CHSGMVDEALGYFEMMQKEYRI 521
Query: 396 SALLDMYGKRGSIFESQRVFNET--------QEKSEFAWTAIISALARHGDYE 440
++D YG ++F R +E E SEF W+ +I+ G E
Sbjct: 522 KPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIAGCRNLGKQE 574
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 171/335 (51%), Gaps = 19/335 (5%)
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C + ++ + IH IK G ++V L++ Y+KC G+A K+F +H RNV++W
Sbjct: 84 CTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVAW 143
Query: 229 TTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
T +++ ++ A+ +F++M G P++ T ++A S N +K G+ +H IK
Sbjct: 144 TALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIK 203
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+PS+ N L ++Y++ S+ S VF + + +ISW A+IS +NG + ++
Sbjct: 204 YKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAMGLRF 263
Query: 344 FFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
F ++ E KPN +T +VL+ ++L G+ HS IK+G + + ++++ +Y
Sbjct: 264 FNEMLLEDIKPNEFTLTTVLSLCCVT--LALVLGRLVHSLSIKLGYQYNLRITNSIMYLY 321
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES-----------VMNQFKEMEN 451
K G + E+Q +F++ + W A+IS A+ D ++ F E+
Sbjct: 322 LKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNR 381
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
G +PD T SVLTVC R + +G L +K
Sbjct: 382 TGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIK 416
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 3/212 (1%)
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
++ L+ + N V E ++IH IKT + +V L+ +YA+ +M ++ K+FD L
Sbjct: 77 YLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLH 136
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHG 376
R +++W AL++GY QN A+ F +++ + P+ YT G LNA A I L G
Sbjct: 137 RRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKL--G 194
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
++ H+ +IK LD DP +G+AL +Y K GS+ S VF EK+ +WTA+ISA +
Sbjct: 195 KQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGEN 254
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
G + F EM + ++P+ T +VL++C
Sbjct: 255 GKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLC 286
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
S+ Q H+HIIK G D V ++L+++Y K G++ ++++F+ ++ AWTA+++
Sbjct: 89 SVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVAWTALMT 148
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
++ ++ F++M G P + T L C I G+ L ++K Y ++
Sbjct: 149 GYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIK-YKLD 207
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
P + + + ++G L+ + + I G + +++ AC +G MG R +
Sbjct: 208 YDPSIGNALCSLYSKLGSLDSSINVFQSI-GEKNVISWTAVISACGENGKAAMGLRFFNE 266
Query: 552 LM 553
++
Sbjct: 267 ML 268
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/540 (34%), Positives = 299/540 (55%), Gaps = 21/540 (3%)
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYT---QDGDYGVEAILALIEMMRKGLRLDHVSFTS 164
L A VF+++ + ++N +L G + D+ VE L + GL+ ++ ++
Sbjct: 77 LAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSL---GLKANNFTYPF 133
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
ACG+ + L GK H + K G V + L++ Y++C G A KVF M DR+
Sbjct: 134 LFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRD 193
Query: 225 VISWTTMISMN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
++SW +MIS ++A+ LF EMR +G P+++T + ++ A + GR + G
Sbjct: 194 LVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEG 253
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
++ + + LI MY + + + +VFD + +++++WNA+I+GYAQNG S
Sbjct: 254 FVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNE 313
Query: 340 AVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
A+ F G+ + P+ T VL+A + L G+ +H + GL D V SAL
Sbjct: 314 AIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDL--GKWVETHASEKGLQHDVYVASAL 371
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM--ENKGVRP 456
+DMY K GS+ ++ RVF K+E +W A+ISALA HG + ++ F+ M +N V+P
Sbjct: 372 IDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQP 431
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ ITF+ VL+ C G++ +GR LF+SM + + P +HYSCMVD+ R G L EA +L
Sbjct: 432 NDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDL 491
Query: 517 VGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDW 576
+ ++PG P VL SLLGAC+ N ++GER+ ++ME + SG+YV+ S +YA W
Sbjct: 492 IKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRW 551
Query: 577 EMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ A +R M+ GV K G SW D+G +H F +GD+ H S IY++ L EMK
Sbjct: 552 DDSAKMRVLMRQCGVSKTPGCSWIDIG--AHVHEFHAGDSLHNHSMNIYQL---LNEEMK 606
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 231/451 (51%), Gaps = 18/451 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSG----FEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHE 71
+FN L P+I ++N +L G ++K D + ++ +G+ + TY C +
Sbjct: 83 VFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVR 142
Query: 72 GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
G + G H L+ K GLD + YV ++LITMY+R G + AR+VFDEM ++D VSWN+++S
Sbjct: 143 GLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMIS 202
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
GY++ G + EAI +EM +G D ++ S ACG +L LG+ + G ++
Sbjct: 203 GYSKMG-FTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKME 261
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEM 246
+ +G+ L+ Y KC A +VF M +++V++W +I+ + +A+ LF M
Sbjct: 262 VNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGM 321
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
R G P+ VT I ++ A S + G+ + + + V + LI MYA+ S+
Sbjct: 322 REAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSL 381
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES---KPNAYTFGSVLN 363
D+ +VF+ + + +SWNA+IS A +G + A+ F + K++ +PN TF VL+
Sbjct: 382 DDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLS 441
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS- 422
A A + + Q S + GL S ++D+ + G ++E+ + + K
Sbjct: 442 ACVHAGLVD-EGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPD 500
Query: 423 EFAWTAIISALARHGDY---ESVMNQFKEME 450
E +++ A R + E V+ F EME
Sbjct: 501 EIVLGSLLGACQRRRNADVGERVIQLFLEME 531
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 166/313 (53%), Gaps = 12/313 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY + G+ A +F+ + + D+VSWN+++SG+ K + +A+ + M G D
Sbjct: 170 ITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDE 229
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T + L C D G + +++ ++ Y+G+ALI MY + G L+ ARRVFD
Sbjct: 230 MTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDS 289
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MPNKD V+WNAI++GY Q+G EAI+ M G D V+ SAC L+L
Sbjct: 290 MPNKDVVTWNAIITGYAQNGASN-EAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDL 348
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK + + + G V V + L+ Y+KC DA +VF M +N +SW MIS
Sbjct: 349 GKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAF 408
Query: 235 --NREDAVSLFKEMRLDG--VCPNDVTFIGLIHAISIGNLVKEGR-MIHGLCIKTNFLSE 289
++A+SLF+ M D V PND+TFIG++ A LV EGR + + + + +
Sbjct: 409 HGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPK 468
Query: 290 PSVCNCLITMYAR 302
+C++ + AR
Sbjct: 469 VEHYSCMVDLCAR 481
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 307/567 (54%), Gaps = 15/567 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS--VSWNAILSGYTQ 135
Q+HS +V + + N L+ +Y++ G + +F+ P+ + V+W +++ ++
Sbjct: 118 QIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSR 177
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+ +A+ M G+ +H +F++ AC H L G+QIH + K +
Sbjct: 178 S-NKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPF 236
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDG 250
V L+ Y+KC A VF M RN++SW +MI ++ A+ +F+E+ G
Sbjct: 237 VATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG 296
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
P+ V+ ++ A + + G+ +HG +K + V N L+ MY + +D+
Sbjct: 297 --PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDAT 354
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAE 369
K+F R++++WN +I G + A F +I+E +P+ ++ S+ +A +A
Sbjct: 355 KLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHA--SAS 412
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+L G HSH++K G + + S+L+ MYGK GS+ ++ +VF ET+E + WTA+
Sbjct: 413 IAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAM 472
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I+ +HG + F+EM N+GV P+ ITF+SVL+ C G I G F+SM ++
Sbjct: 473 ITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHN 532
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I+P +HY+CMVD+LGRVGRLEEA + +P P V +LLGAC H NVEMG +A
Sbjct: 533 IKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVA 592
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
+ L K+EP G+Y+L+SN+Y G E +R+ M GVRKE G SW DV + +
Sbjct: 593 ERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFV- 651
Query: 610 GFSSGDNTHPRSEEIYRMAECLGSEMK 636
F++ D +H R++EIY M + L +K
Sbjct: 652 -FNANDRSHSRTQEIYGMLQKLKELIK 677
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 157/530 (29%), Positives = 259/530 (48%), Gaps = 61/530 (11%)
Query: 3 MYCKSGQFDKALCIFNNLNNP--DIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+Y K G L +FN +P ++V+W T+++ +S+ AL+F RM G+ +
Sbjct: 141 LYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNH 200
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+S L C G Q+H+LI K ++ +V AL+ MY++ G ++ A VFDE
Sbjct: 201 FTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDE 260
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP+++ VSWN+++ G+ ++ YG AI E++ G D VS +S SAC L+
Sbjct: 261 MPHRNLVSWNSMIVGFVKNKLYG-RAIGVFREVLSLG--PDQVSISSVLSACAGLVELDF 317
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
GKQ+HG +K G V V N L+ Y KC + DA K+F DR+V++W MI
Sbjct: 318 GKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFR 377
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N E A + F+ M +GV P++ ++ L HA + + +G MIH +KT + +
Sbjct: 378 CRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRI 437
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ L+TMY + SM D+ +VF E ++ W A+I+ + Q+G + A++ F ++ E
Sbjct: 438 SSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGV 497
Query: 352 KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
P TF SVL+A G +D + H IK GL+ + ++D+ G+ G +
Sbjct: 498 VPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHY----ACMVDLLGRVGRL 553
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
E+ R E W A++ A
Sbjct: 554 EEACRFIESMPFEPDSLVWGALLGA----------------------------------- 578
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVGRLEEAEEL 516
CG++ + GR + + + K +EP +P +Y + ++ R G LEEA+E+
Sbjct: 579 CGKHANVEMGREVAERLFK---LEPDNPGNYMLLSNIYIRHGMLEEADEV 625
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 177/351 (50%), Gaps = 11/351 (3%)
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISWTT 230
K+L+ QIH + ++ N L+ Y+KC +F NV++WTT
Sbjct: 111 KSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTT 170
Query: 231 MIS-MNRED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I+ ++R + A++ F MR G+ PN TF ++ A + L+ EG+ IH L K
Sbjct: 171 LINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHC 230
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
FL++P V L+ MYA+ SM +E VFDE+ R ++SWN++I G+ +N L A+ F
Sbjct: 231 FLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFR 290
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
V+ P+ + SVL+A A + L G++ H I+K GL V ++L+DMY K
Sbjct: 291 EVLSLG-PDQVSISSVLSA--CAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKC 347
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G ++ ++F ++ W +I R ++E F+ M +GV PD ++ S+
Sbjct: 348 GLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLF 407
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ +G + +LK H++ S S +V M G+ G + +A ++
Sbjct: 408 HASASIAALTQGTMIHSHVLKTGHVKNSRIS-SSLVTMYGKCGSMLDAYQV 457
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 148/280 (52%), Gaps = 7/280 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD-DALSFALRMNLIGVVFDAVT 59
++MY K G A +F+ + + ++VSWN+++ GF K+ + + ++ + D V+
Sbjct: 242 LDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVS 301
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
S+ LS C FG Q+H IVK GL VYV N+L+ MY + G +A ++F
Sbjct: 302 ISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGG 361
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
++D V+WN ++ G + ++ +A M+R+G+ D S++S A L G
Sbjct: 362 DRDVVTWNVMIMGCFRCRNFE-QACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGT 420
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
IH +K G+ + + + L++ Y KC DA +VFR + NV+ WT MI++ +
Sbjct: 421 MIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHG 480
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+A+ LF+EM +GV P +TF+ ++ A S + +G
Sbjct: 481 CANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDG 520
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 28/211 (13%)
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSV------LNAVGAAEDIS 372
RE+ W L + Y Q+G+ P + F SV LN AA+ S
Sbjct: 72 REVAFWLQLFTSY-QSGV----------------PKFHQFSSVPDLKHLLN--NAAKLKS 112
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE--FAWTAII 430
LKH + HS ++ + + LL +Y K GSI + +FN S WT +I
Sbjct: 113 LKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLI 172
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
+ L+R + F M G+ P+ TF ++L C ++ +G+ + +++ +
Sbjct: 173 NQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI-HALIHKHCF 231
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
P + ++DM + G + AE + ++P
Sbjct: 232 LNDPFVATALLDMYAKCGSMLLAENVFDEMP 262
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 198/654 (30%), Positives = 328/654 (50%), Gaps = 49/654 (7%)
Query: 28 WNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIV 84
+N+++ G+ S ++A+ LRM G+ D T+ LS C G+Q+H LIV
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 85 KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAI 144
K G +++V N+L+ Y+ G L AR+VFDEM ++ VSW +++ GY + D+ +A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR-DFAKDAV 220
Query: 145 LALIEMMR-KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
M+R + + + V+ SAC ++LE G++++ G + + + L+
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMIS------MNREDAVSLFKEMRLDGVCPNDVT 257
Y KC A ++F N+ M S + RE A+ +F M GV P+ ++
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE-ALGVFNLMMDSGVRPDRIS 339
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
+ I + S + G+ HG ++ F S ++CN LI MY + + ++FD +S
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 318 CREIISWNALISGYAQNG-------------------------------LSLAAVQAFFG 346
+ +++WN++++GY +NG L A++ F
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 347 VIKESKPNA--YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ + NA T S+ +A G + L + + +I K G+ D +G+ L+DM+ +
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDL--AKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + +FN + AWTA I A+A G+ E + F +M +G++PD + F+
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
LT C G++ +G+ +F SMLK + + P HY CMVD+LGR G LEEA +L+ +P P
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ SLL ACR+ GNVEM A+ + + P +GSYVL+SN+YA G W +A +R
Sbjct: 638 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 697
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
MK KG+RK G S + H F+SGD +HP I M + + +L
Sbjct: 698 SMKEKGLRKPPGTSSIQIR--GKTHEFTSGDESHPEMPNIEAMLDEVSQRASHL 749
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 223/484 (46%), Gaps = 47/484 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRM-NLIGVVFD 56
++ Y + G+ D A +F+ ++ ++VSW +++ G+ + D DA+ RM V +
Sbjct: 176 VHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPN 235
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+VT +S C E G ++++ I G++ + +AL+ MY + + A+R+FD
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E + NA+ S Y + G EA+ MM G+R D +S SA S+C +N+
Sbjct: 296 EYGASNLDLCNAMASNYVRQG-LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 354
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH--------------- 221
GK HG ++ G+ + ++ N L+ Y KC A ++F RM
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 222 ----------------DRNVISWTTMIS-----MNREDAVSLFKEMR-LDGVCPNDVTFI 259
++N++SW T+IS E+A+ +F M+ +GV + VT +
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
+ A + + I+ K + + L+ M++R + + +F+ L+ R
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQR 378
++ +W A I A G + A++ F +I++ KP+ F L A + + G+
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLV--QQGKE 592
Query: 379 CHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFES-QRVFNETQEKSEFAWTAIISALARH 436
++K+ G+ + + ++D+ G+ G + E+ Q + + E ++ W ++++A
Sbjct: 593 IFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQ 652
Query: 437 GDYE 440
G+ E
Sbjct: 653 GNVE 656
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWN---TVLSGFEKSDDALSFALRMNLIGVVFDA 57
++M+ + G + A+ IFN+L N D+ +W ++ ++ A+ M G+ D
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 58 VTYSTALSFCLDHEGFLFGLQ--LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
V + AL+ C H G + + +S++ G+ E ++ + R G L EA ++
Sbjct: 572 VAFVGALTAC-SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 116 DEMP-NKDSVSWNAILSGYTQDGD-----YGVEAILAL 147
++MP + V WN++L+ G+ Y E I L
Sbjct: 631 EDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
>gi|15229753|ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g50420
gi|6561982|emb|CAB62471.1| putative protein [Arabidopsis thaliana]
gi|332645144|gb|AEE78665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 794
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 185/632 (29%), Positives = 341/632 (53%), Gaps = 19/632 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFAL----RMNLIGVVFD 56
++MY + G ++A +F+ + + ++VS+N + S + ++ D S+A M V +
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPN 198
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ T+++ + C E L G L+S I+K G V V +++ MYS G L ARR+FD
Sbjct: 199 SSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD 258
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ N+D+V+WN ++ G ++ D + ++ M+ G+ +++ + C +
Sbjct: 259 CVNNRDAVAWNTMIVGSLKN-DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
LGK IH I + + N L+ Y C +A VF R+H+ N++SW ++IS
Sbjct: 318 LGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCS 377
Query: 237 ED-----AVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E+ A+ +++ + R+ P++ TF I A + G+++HG K +
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSV 437
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V L++MY + + ++KVFD + R+++ W +I G+++ G S AVQ F + +E
Sbjct: 438 FVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYRE 497
Query: 351 -SKPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
++ + ++ SV +GA D++ L+ G+ H I+ G D V AL+DMYGK G
Sbjct: 498 KNRSDGFSLSSV---IGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKY 554
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ +F+ W +++ A ++HG E ++ F+++ G PD++T+LS+L C
Sbjct: 555 ETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAAC 614
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G +G+ L++ M K+ I+ HYSCMV+++ + G ++EA EL+ Q P G +
Sbjct: 615 SHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAE 673
Query: 529 L-QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
L ++LL AC N+++G A+ ++K++P + +++L+SNLYA G WE VA +R+ ++
Sbjct: 674 LWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIR 733
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHP 619
K+ G SW +V + + FSSGD ++P
Sbjct: 734 GLASSKDPGLSWIEVNN-NNTQVFSSGDQSNP 764
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 245/476 (51%), Gaps = 14/476 (2%)
Query: 78 QLHSLIVKFGLDSEV---YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
Q+H+L++ G + Y N LI+MY R G L +AR+VFD+MP+++ VS+NA+ S Y+
Sbjct: 115 QIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYS 174
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
++ D+ A M + ++ + +FTS C +++ +G ++ IK+GY +V
Sbjct: 175 RNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNV 234
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI--SMNR---EDAVSLFKEMRLD 249
V ++ YS C A ++F +++R+ ++W TMI S+ ED + F+ M +
Sbjct: 235 VVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMS 294
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
GV P T+ +++ S G++IH I ++ L++ + N L+ MY M+++
Sbjct: 295 GVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA 354
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGA 367
VF + ++SWN++ISG ++NG A+ + +++ S +P+ YTF + ++A
Sbjct: 355 FYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISAT-- 412
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
AE HG+ H + K+G + VG+ LL MY K +Q+VF+ +E+ WT
Sbjct: 413 AEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWT 472
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
+I +R G+ E + F EM + R D + SV+ C M+ +G +F +
Sbjct: 473 EMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIR 531
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
+ +VDM G+ G+ E AE + + P L S+LGA HG VE
Sbjct: 532 TGFDCVMSVCGALVDMYGKNGKYETAETIFS-LASNPDLKCWNSMLGAYSQHGMVE 586
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 178/422 (42%), Gaps = 42/422 (9%)
Query: 93 YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEM-- 150
Y N LI+MY R L +AR+VFD+MP ++ V+ +G+ A+ + M
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTL------------FGLSAVFEYVSMGS 70
Query: 151 -------------MRKGLRLDHV--SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
M + L+ + S C L+ +QIH + + G G
Sbjct: 71 SLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATE 130
Query: 196 ---VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED------AVSLFKEM 246
N L+S Y +C A KVF +M RNV+S+ + S + A L M
Sbjct: 131 SPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHM 190
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+ V PN TF L+ ++ V G ++ IK + V ++ MY+ +
Sbjct: 191 AFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDL 250
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV 365
+ + ++FD ++ R+ ++WN +I G +N + F ++ P +T+ VLN
Sbjct: 251 ESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGC 310
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
SL G+ H+ II +D + +ALLDMY G + E+ VF + +
Sbjct: 311 SKLGSYSL--GKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVS 368
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGV-RPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W +IIS + +G E M ++ + RPD TF + ++ G+ L +
Sbjct: 369 WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQV 428
Query: 485 LK 486
K
Sbjct: 429 TK 430
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 280 LCIKTNFLSE-PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL--ISGYAQNGL 336
L ++T+ +E P N LI+MY R S++ + KVFD++ R I++ L + Y G
Sbjct: 11 LFVETDAAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGS 70
Query: 337 SLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDS--- 390
SL + G + P SV+ I+ LK ++ H+ ++ G +
Sbjct: 71 SLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATE 130
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF-KEM 449
P + L+ MY + GS+ ++++VF++ ++ ++ A+ SA +R+ D+ S M
Sbjct: 131 SPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHM 190
Query: 450 ENKGVRPDSITFLSVLTVCG 469
+ V+P+S TF S++ VC
Sbjct: 191 AFEYVKPNSSTFTSLVQVCA 210
>gi|413948598|gb|AFW81247.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 788
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 189/554 (34%), Positives = 292/554 (52%), Gaps = 17/554 (3%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
V+V AL Y++ GRL A +V DEMP+++ VSW +++ + G +A+ EM
Sbjct: 89 VFVSTALADAYAKAGRLDLALQVLDEMPSRNVVSWTTLVASLARAGRRH-DALRRFAEMR 147
Query: 152 RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
G+ D + ++A +AC L G+++H + K+G V N L + Y++C
Sbjct: 148 ASGVACDSHACSAALTACADAGLLPRGREVHALCAKLGLDAVPFVANALAALYARCGDVD 207
Query: 212 DANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLD----GVCPNDVTFIGLI 262
A RM +V TT+I+ E+A+ F M D PN+ TF +I
Sbjct: 208 RALAAVGRMGSHDVAVCTTLIASYVQTGRTEEAIEAFVRMLRDESSNSASPNEYTFSAVI 267
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
A + G +H + SV N L+ +Y+R + ++ +F E ++++
Sbjct: 268 AACPNMDRAYLGEQLHAQAARRGLSHARSVANSLVKLYSRRGHLSAADAIFRESVVKDVV 327
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIKES---KPNAYTFGSVLNAVGAAEDISLKHGQRC 379
SW+ +ISGY Q GL+ + F + S +PN +T S+ + +A SL G++
Sbjct: 328 SWSTIISGYTQEGLAEESFALFSEMRHHSSCPRPNEFTLASLFSVCASA--ASLDTGRQL 385
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+ + GL+ +V SAL++MYGK GS+ ++ VF+ + +WTA+I A HG
Sbjct: 386 HALAVAAGLEHHAMVRSALVNMYGKGGSMSDANVVFSNRTKDDVISWTAMIVGHAEHGHS 445
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC 499
+ F+EM G++PD +TF+ VLT C G + G ++M K Y +EP +HY C
Sbjct: 446 KEAFELFEEMCRIGLKPDHVTFIGVLTACSHAGELELGLRYLNAMNKSYGLEPEKEHYGC 505
Query: 500 MVDMLGRVGRLEEAEELVGQIPGGPGLSVL-QSLLGACRIHGNVEMGERIADALMKMEPA 558
+VD+L R GR+ EAEEL+G+I V+ SLL AC G E G+ A+ +M+ EP
Sbjct: 506 VVDLLARAGRIHEAEELIGRIAAEERDGVVWTSLLRACAARGAEETGKIAAERMMEAEPW 565
Query: 559 GSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADV-GDIDGLHGFSSGDNT 617
GSG++V+M+NLYA KG W A R MK KGV K G+S +V GD G+ F SGD T
Sbjct: 566 GSGAHVVMANLYASKGLWCEAAQERHLMKQKGVLKGAGWSSVEVGGDDRGVGVFVSGDRT 625
Query: 618 HPRSEEIYRMAECL 631
+P+ IY M E +
Sbjct: 626 NPQDSAIYMMLELM 639
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 222/458 (48%), Gaps = 21/458 (4%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
+ Y K+G+ D AL + + + + ++VSW T+++ ++ DAL M GV D+
Sbjct: 97 DAYAKAGRLDLALQVLDEMPSRNVVSWTTLVASLARAGRRHDALRRFAEMRASGVACDSH 156
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
S AL+ C D G ++H+L K GLD+ +V NAL +Y+R G + A M
Sbjct: 157 ACSAALTACADAGLLPRGREVHALCAKLGLDAVPFVANALAALYARCGDVDRALAAVGRM 216
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR----KGLRLDHVSFTSAASACGHEKN 174
+ D +++ Y Q G EAI A + M+R + +F++ +AC +
Sbjct: 217 GSHDVAVCTTLIASYVQTGRTE-EAIEAFVRMLRDESSNSASPNEYTFSAVIAACPNMDR 275
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
LG+Q+H + + G SV N L+ YS+ A+ +FR ++V+SW+T+IS
Sbjct: 276 AYLGEQLHAQAARRGLSHARSVANSLVKLYSRRGHLSAADAIFRESVVKDVVSWSTIISG 335
Query: 235 NR-----EDAVSLFKEMRLDGVC--PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
E++ +LF EMR C PN+ T L + + GR +H L +
Sbjct: 336 YTQEGLAEESFALFSEMRHHSSCPRPNEFTLASLFSVCASAASLDTGRQLHALAVAAGLE 395
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
V + L+ MY + SM D+ VF + ++ISW A+I G+A++G S A + F +
Sbjct: 396 HHAMVRSALVNMYGKGGSMSDANVVFSNRTKDDVISWTAMIVGHAEHGHSKEAFELFEEM 455
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKR 405
+ KP+ TF VL A A ++ L G R + + K GL+ + ++D+ +
Sbjct: 456 CRIGLKPDHVTFIGVLTACSHAGELEL--GLRYLNAMNKSYGLEPEKEHYGCVVDLLARA 513
Query: 406 GSIFESQRVFNE--TQEKSEFAWTAIISALARHGDYES 441
G I E++ + +E+ WT+++ A A G E+
Sbjct: 514 GRIHEAEELIGRIAAEERDGVVWTSLLRACAARGAEET 551
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 182/422 (43%), Gaps = 31/422 (7%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDH--------------VSFT 163
MP +D V++ +LSGY D+ +AL R H +
Sbjct: 1 MPRRDEVAYATLLSGYAAAADF--PGAMALFSRFRASSSQPHDAADPFILSPVLKACASA 58
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
+A++ + +H +++ V V L Y+K A +V M R
Sbjct: 59 AASAGLLPLPHAAAAAALHAFAVRSSSLPSVFVSTALADAYAKAGRLDLALQVLDEMPSR 118
Query: 224 NVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
NV+SWTT+++ R DA+ F EMR GV + + A + L+ GR +H
Sbjct: 119 NVVSWTTLVASLARAGRRHDALRRFAEMRASGVACDSHACSAALTACADAGLLPRGREVH 178
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
LC K + P V N L +YAR + + + ++ LI+ Y Q G +
Sbjct: 179 ALCAKLGLDAVPFVANALAALYARCGDVDRALAAVGRMGSHDVAVCTTLIASYVQTGRTE 238
Query: 339 AAVQAFFGVIKE-----SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
A++AF ++++ + PN YTF +V+ A + L G++ H+ + GL
Sbjct: 239 EAIEAFVRMLRDESSNSASPNEYTFSAVIAACPNMDRAYL--GEQLHAQAARRGLSHARS 296
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
V ++L+ +Y +RG + + +F E+ K +W+ IIS + G E F EM +
Sbjct: 297 VANSLVKLYSRRGHLSAADAIFRESVVKDVVSWSTIISGYTQEGLAEESFALFSEMRHHS 356
Query: 454 --VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
RP+ T S+ +VC + GR L ++ +E S +V+M G+ G +
Sbjct: 357 SCPRPNEFTLASLFSVCASAASLDTGRQLH-ALAVAAGLEHHAMVRSALVNMYGKGGSMS 415
Query: 512 EA 513
+A
Sbjct: 416 DA 417
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 116/240 (48%), Gaps = 9/240 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-LSFAL----RMNLIGVVF 55
+ +Y + G A IF D+VSW+T++SG+ + A SFAL R +
Sbjct: 302 VKLYSRRGHLSAADAIFRESVVKDVVSWSTIISGYTQEGLAEESFALFSEMRHHSSCPRP 361
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T ++ S C G QLH+L V GL+ V +AL+ MY + G + +A VF
Sbjct: 362 NEFTLASLFSVCASAASLDTGRQLHALAVAAGLEHHAMVRSALVNMYGKGGSMSDANVVF 421
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D +SW A++ G+ + G + EA EM R GL+ DHV+F +AC H L
Sbjct: 422 SNRTKDDVISWTAMIVGHAEHG-HSKEAFELFEEMCRIGLKPDHVTFIGVLTACSHAGEL 480
Query: 176 ELG-KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISWTTMI 232
ELG + ++ ++ G ++ ++ +A ++ R+ +R+ + WT+++
Sbjct: 481 ELGLRYLNAMNKSYGLEPEKEHYGCVVDLLARAGRIHEAEELIGRIAAEERDGVVWTSLL 540
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 290/500 (58%), Gaps = 14/500 (2%)
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
AL++M G + + + + C ++ + G+++H IK Y V + L+ Y+
Sbjct: 77 ALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYN 136
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIG 260
KC+ GDA ++F M +NV+SWT MIS + +A++LF EM PN TF
Sbjct: 137 KCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFAT 196
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
++ + + GR IH + IK N+ S V + L+ MYA+ + D+ VF L R+
Sbjct: 197 ILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERD 256
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRC 379
+++ A+ISGYAQ GL A++ F + I+ N+ T+ SVL A+ +L HG++
Sbjct: 257 VVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLA--ALNHGKQV 314
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
HSH+++ G S ++ ++L+DMY K G++ ++R+F+ E++ +W A++ ++HG
Sbjct: 315 HSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMA 374
Query: 440 ESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML--KDYHIEPSPDH 496
V+ FK M E V+PDSIT+L+VL+ C + G +F +M+ KD IEP H
Sbjct: 375 REVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKD-GIEPDIGH 433
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
Y C+VD+LGR GR+EEA + + ++P P ++ SLLG+CR+H +VE+G + L+++E
Sbjct: 434 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELE 493
Query: 557 PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDN 616
P +G+YV++SNLYA G WE + +R M+ K V KE G SW ++ I +H F + D+
Sbjct: 494 PENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQI--VHTFHASDH 551
Query: 617 THPRSEEIYRMAECLGSEMK 636
THPR EE+ + + L + K
Sbjct: 552 THPRREEVAKKVKELSIKFK 571
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 222/407 (54%), Gaps = 17/407 (4%)
Query: 46 LRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW 105
L+M ++G Y T L+ C+ G ++H+ ++K VY+ LI +Y++
Sbjct: 79 LQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKC 138
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
L +AR +FDEMP K+ VSW A++S Y+Q G + EA+ +EM+R +H +F +
Sbjct: 139 DCLGDAREMFDEMPQKNVVSWTAMISAYSQRG-FAFEALNLFVEMLRSDTEPNHFTFATI 197
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
++C E G+QIH ++IK Y +H+ VG+ L+ Y+K DA+ VF + +R+V
Sbjct: 198 LTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDV 257
Query: 226 ISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
++ T +IS E+A+ LF++++++G+ N VT+ ++ A+S + G+ +H
Sbjct: 258 VACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSH 317
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+++ S + N LI MY++ ++ + ++FD + R ISWNA++ GY+++G++
Sbjct: 318 VLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREV 377
Query: 341 VQAFFGVIKES--KPNAYTFGSVLNAV--GAAEDISLKHGQRCHSHII--KVGLDSDPIV 394
++ F + +E+ KP++ T+ +VL+ G ED+ L+ +++ K G++ D
Sbjct: 378 LELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLE----IFYNMVNGKDGIEPDIGH 433
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
++D+ G+ G + E+ + A W +++ + H D E
Sbjct: 434 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVE 480
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 147/278 (52%), Gaps = 12/278 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
+Y K A +F+ + ++VSW ++S + + + +AL+ + M + T
Sbjct: 134 LYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFT 193
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++T L+ C GF G Q+HS+ +K +S ++VG++L+ MY++ GR+ +A VF +P
Sbjct: 194 FATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 253
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D V+ AI+SGY Q G EA+ ++ +G+ + V++ S +A L GK
Sbjct: 254 ERDVVACTAIISGYAQMG-LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGK 312
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI------S 233
Q+H ++ G ++V + N L+ YSKC A ++F M +R ISW M+
Sbjct: 313 QVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHG 372
Query: 234 MNREDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNL 270
M RE + LFK MR + V P+ +T++ ++ S G L
Sbjct: 373 MARE-VLELFKLMREENKVKPDSITYLAVLSGCSHGQL 409
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 108/186 (58%), Gaps = 7/186 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY KSG+ A +F+ L D+V+ ++SG+ + ++AL ++ + G+ ++
Sbjct: 233 LDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNS 292
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY++ L+ G Q+HS +++ G S V + N+LI MYS+ G + ARR+FD
Sbjct: 293 VTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDS 352
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNL 175
MP + +SWNA+L GY++ G +L L ++MR+ ++ D +++ + S C H +
Sbjct: 353 MPERTCISWNAMLVGYSKHG--MAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLE 410
Query: 176 ELGKQI 181
++G +I
Sbjct: 411 DMGLEI 416
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/604 (32%), Positives = 322/604 (53%), Gaps = 50/604 (8%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR----------------------- 112
G LH+L VK + S Y+ N + +YS+ GRL AR
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 113 --------RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS 164
++FDE+P D+VS+N ++SGY D A++ M + G +D + +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYA-DARETFAAMVLFKRMRKLGFEVDGFTLSG 145
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-R 223
+AC ++L KQ+H S+ G+ ++ SV N ++ YSK + +A VF M + R
Sbjct: 146 LIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203
Query: 224 NVISWTTMI---SMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
+ +SW +MI ++E A++L+KEM G + T +++A++ + + GR H
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 279 GLCIKTNFLSEPSVCNCLITMYARF---ESMQDSEKVFDELSCREIISWNALISGYAQNG 335
G IK F V + LI Y++ + M DSEKVF E+ +++ WN +ISGY+ N
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE 323
Query: 336 -LSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
LS AV++F + + +P+ +F V +A S ++ H IK + S+ I
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS--QCKQIHGLAIKSHIPSNRI 381
Query: 394 -VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
V +AL+ +Y K G++ +++ VF+ E + ++ +I A+HG + ++ M +
Sbjct: 382 SVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDS 441
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
G+ P+ ITF++VL+ C G + +G+ F++M + + IEP +HYSCM+D+LGR G+LEE
Sbjct: 442 GIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEE 501
Query: 513 AEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAE 572
AE + +P PG +LLGACR H N+ + ER A+ LM M+P + YV+++N+YA+
Sbjct: 502 AERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYAD 561
Query: 573 KGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLG 632
WE +A +RK M+ K +RK+ G SW +V H F + D +HP E+ E +
Sbjct: 562 ARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKK--HVFVAEDWSHPMIREVNEYLEEMM 619
Query: 633 SEMK 636
+MK
Sbjct: 620 KKMK 623
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/476 (31%), Positives = 241/476 (50%), Gaps = 31/476 (6%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTY 60
Y K + A +F+ + PD VS+NT++SG+ + + A+ RM +G D T
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF---DE 117
S ++ C D + QLH V G DS V NA +T YS+ G L EA VF DE
Sbjct: 144 SGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE 201
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +D VSWN+++ Y Q + G +A+ EM+ KG ++D + S +A +L
Sbjct: 202 L--RDEVSWNSMIVAYGQHKE-GAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSK---CEVTGDANKVFRRMHDRNVISWTTMI-- 232
G+Q HG IK G+ + VG+ L+ YSK C+ D+ KVF+ + +++ W TMI
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Query: 233 -SMNR---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
SMN E+AV F++M+ G P+D +F+ + A S + + + IHGL IK++ S
Sbjct: 319 YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378
Query: 289 EP-SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
SV N LI++Y + ++QD+ VFD + +S+N +I GYAQ+G A+ + +
Sbjct: 379 NRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM 438
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGK 404
+ PN TF +VL+A + GQ + + +K +P S ++D+ G+
Sbjct: 439 LDSGIAPNKITFVAVLSACAHCGKVD--EGQE-YFNTMKETFKIEPEAEHYSCMIDLLGR 495
Query: 405 RGSIFESQRVFNETQEKS-EFAWTAIISALARHGDY---ESVMNQFKEMENKGVRP 456
G + E++R + K AW A++ A +H + E N+ M+ P
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATP 551
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/488 (36%), Positives = 284/488 (58%), Gaps = 14/488 (2%)
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
AL++M G + + S + C ++ + G+++H IK Y V + L+ Y+
Sbjct: 49 ALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYN 108
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIG 260
KC+ GDA +F M RNV+SWT MIS + +A++LF EM PN TF
Sbjct: 109 KCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFAT 168
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
++ + + GR IH + IK N+ S V + L+ MYA+ + D+ VF L R+
Sbjct: 169 ILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERD 228
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRC 379
+++ A+ISGYAQ GL A++ F + I+ N+ T+ SVL A+ +L HG++
Sbjct: 229 VVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLA--ALNHGKQV 286
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
HSH+++ G S ++ ++L+DMY K G++ ++R+F+ E++ +W A++ ++HG
Sbjct: 287 HSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMA 346
Query: 440 ESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML--KDYHIEPSPDH 496
V+ FK M E V+PDSIT+L+VL+ C + G +F +M+ KD IEP H
Sbjct: 347 REVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKD-GIEPDIGH 405
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
Y C+VD+LGR GR+EEA + + ++P P ++ SLLG+CR+H +VE+G + L+++E
Sbjct: 406 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELE 465
Query: 557 PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDN 616
P +G+YV++SNLYA G WE + +R M+ K V KE G SW ++ I +H F + D+
Sbjct: 466 PENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQI--VHTFHASDH 523
Query: 617 THPRSEEI 624
THPR EE+
Sbjct: 524 THPRREEV 531
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 222/407 (54%), Gaps = 17/407 (4%)
Query: 46 LRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW 105
L+M ++G Y + L+ C+ G ++H+ ++K VY+ LI +Y++
Sbjct: 51 LQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKC 110
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
L +AR +FDEMP ++ VSW A++S Y+Q G + EA+ +EM+R +H +F +
Sbjct: 111 DCLGDARGMFDEMPQRNVVSWTAMISAYSQRG-FAFEALNLFVEMLRSDTEPNHFTFATI 169
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
++C E G+QIH ++IK Y +H+ VG+ L+ Y+K DA+ VF + +R+V
Sbjct: 170 LTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDV 229
Query: 226 ISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
++ T +IS E+A+ LF++++++G+ N VT+ ++ A+S + G+ +H
Sbjct: 230 VACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSH 289
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+++ S + N LI MY++ ++ + ++FD + R ISWNA++ GY+++G++
Sbjct: 290 VLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREV 349
Query: 341 VQAFFGVIKES--KPNAYTFGSVLNAV--GAAEDISLKHGQRCHSHII--KVGLDSDPIV 394
++ F + +E+ KP++ T+ +VL+ G ED+ L+ +++ K G++ D
Sbjct: 350 LELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLE----IFYNMVNGKDGIEPDIGH 405
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
++D+ G+ G + E+ + A W +++ + H D E
Sbjct: 406 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVE 452
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 147/278 (52%), Gaps = 12/278 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
+Y K A +F+ + ++VSW ++S + + + +AL+ + M + T
Sbjct: 106 LYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFT 165
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++T L+ C GF G Q+HS+ +K +S ++VG++L+ MY++ GR+ +A VF +P
Sbjct: 166 FATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 225
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D V+ AI+SGY Q G EA+ ++ +G+ + V++ S +A L GK
Sbjct: 226 ERDVVACTAIISGYAQMG-LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGK 284
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI------S 233
Q+H ++ G ++V + N L+ YSKC A ++F M +R ISW M+
Sbjct: 285 QVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHG 344
Query: 234 MNREDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNL 270
M RE + LFK MR + V P+ +T++ ++ S G L
Sbjct: 345 MARE-VLELFKLMREENKVKPDSITYLAVLSGCSHGQL 381
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 108/186 (58%), Gaps = 7/186 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY KSG+ A +F+ L D+V+ ++SG+ + ++AL ++ + G+ ++
Sbjct: 205 LDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNS 264
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY++ L+ G Q+HS +++ G S V + N+LI MYS+ G + ARR+FD
Sbjct: 265 VTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDS 324
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNL 175
MP + +SWNA+L GY++ G +L L ++MR+ ++ D +++ + S C H +
Sbjct: 325 MPERTCISWNAMLVGYSKHG--MAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLE 382
Query: 176 ELGKQI 181
++G +I
Sbjct: 383 DMGLEI 388
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/550 (30%), Positives = 303/550 (55%), Gaps = 19/550 (3%)
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVE 142
++ F V N +++ Y ++G + EA ++FD +D SWN +LSG ++ G E
Sbjct: 72 LLHFMPQPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLG-E 130
Query: 143 AILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMS 202
+ ++M +R D+ ++ C +L G+Q+H +K+ +G L+
Sbjct: 131 GLTHFMKMRCSSVRPDNFTYAIIIPCC----DLGFGQQVHADIVKVCSDLDAFIGTNLLR 186
Query: 203 TYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVT 257
Y++ GDA KVF M R +++W MIS + ++ LF+++ +G+ ++ T
Sbjct: 187 MYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYT 246
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
+ +++ + V E +H L I+ F S+ N L+ +Y++ + + ++F+E+
Sbjct: 247 YAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIP 306
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHG 376
++++SW +I G+ Q+G A+ F+ + + + +PN++TFG +L A A + + G
Sbjct: 307 DQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADAN--AFQKG 364
Query: 377 QRCHSHIIKVGL-DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
+ H ++K GL +D +VGSA++DMY K G + ++ R F E E+ +W II A+
Sbjct: 365 RHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQ 424
Query: 436 HGDYESVMNQFKEME---NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
+G + + EM G+ P+ +TF+ VL C NG++ +G F M+ + I+P
Sbjct: 425 NGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKP 484
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
+ +HY+CMVD+LGR G L+EAE L+ +P P + +LLGAC++HG+V+M R A+ L
Sbjct: 485 TAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHL 544
Query: 553 MKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFS 612
EP S +YVL++N Y + G+W +R+ M+++GV K G SW ++G +H F
Sbjct: 545 YTNEPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIGTC--MHSFL 602
Query: 613 SGDNTHPRSE 622
+GD HP+ E
Sbjct: 603 AGDXLHPQIE 612
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 238/456 (52%), Gaps = 30/456 (6%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y K G +A+ +F+ + D SWN VLSG K+ + L+ ++M V D TY
Sbjct: 91 YFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTY 150
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ + C FG Q+H+ IVK D + ++G L+ MY+ G + +AR+VFD MP+
Sbjct: 151 AIIIPCC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPS 206
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+ V+WNA++S Y++ G G ++I ++ R+G+ D ++ + + Q
Sbjct: 207 RGLVTWNAMISCYSKYGR-GDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQ 265
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMN 235
+H + I+ G+ + N L++ YSKC A+++F + D++V+SWT +I S +
Sbjct: 266 VHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGH 325
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL-SEPSVCN 294
E+A+ LF +M+L + PN TF GL+ A + N ++GR HGL +K L ++ V +
Sbjct: 326 MEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGS 385
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI----KE 350
++ MY++ M D+ + F E+ R+I SWN +I GYAQNG + A++ + ++
Sbjct: 386 AVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSG 445
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHG-----QRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
PN TF VL A + + LK G + H+IK + + ++D+ G+
Sbjct: 446 IAPNEVTFVGVLCA--CSHNGLLKEGYSYFKEMVDKHLIKPTAEHY----TCMVDLLGRA 499
Query: 406 GSIFESQRVFNETQEKSE-FAWTAIISALARHGDYE 440
G + E++ + K + W A++ A HGD +
Sbjct: 500 GLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQ 535
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 180/350 (51%), Gaps = 17/350 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY + G+ A +F+ + + +V+WN ++S + K D ++ ++ G+ D
Sbjct: 185 LRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADE 244
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY+ L+ +Q+HSLI++ G S+ + NAL+ +YS+ G + A R+F+E
Sbjct: 245 YTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEE 304
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P++D VSW I+ G+ Q G + EA+ +M + + +F AC +
Sbjct: 305 IPDQDVVSWTVIIVGFLQSG-HMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQK 363
Query: 178 GKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+ HG+ +K G G V VG+ ++ YSKC GDA + F+ M +R++ SW +I
Sbjct: 364 GRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYA 423
Query: 237 ED-----AVSLFKEMRL---DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
++ A+ L+ EM L G+ PN+VTF+G++ A S L+KEG + + +
Sbjct: 424 QNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLI- 482
Query: 289 EPSV--CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNG 335
+P+ C++ + R +Q++E + L + + + W AL+ +G
Sbjct: 483 KPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHG 532
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 129/298 (43%), Gaps = 44/298 (14%)
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
+I I S G++ K ++H +K ++ CN L+ Y +++ D+ K+ +
Sbjct: 19 YIRSIELYSHGHMYK-APVLHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMP 77
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGVIKES-------------------------- 351
++S+N ++SGY + GL A++ F G K
Sbjct: 78 QPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMK 137
Query: 352 ------KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+P+ +T+ ++ L GQ+ H+ I+KV D D +G+ LL MY +
Sbjct: 138 MRCSSVRPDNFTYAIIIPCC------DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEV 191
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G I ++++VF+ + W A+IS +++G + + F+++ +G+ D T+ VL
Sbjct: 192 GEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVL 251
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS--CMVDMLGRVGRLEEAEELVGQIP 521
+ + + +++ D ++ +V++ + G + A L +IP
Sbjct: 252 NEFAARWQVFEAMQVHSLIIERGFCS---DRFTNNALVNLYSKCGYVASASRLFEEIP 306
>gi|224065397|ref|XP_002301797.1| predicted protein [Populus trichocarpa]
gi|222843523|gb|EEE81070.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 184/575 (32%), Positives = 319/575 (55%), Gaps = 26/575 (4%)
Query: 78 QLHSLIVKFGLDSEVYVGNA-----LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
Q+H+LI+ GL + N+ +I Y+R G + AR +FD++P + +WNA++
Sbjct: 25 QIHALIITTGL----FFANSNFNGLVIASYARIGGITSARHLFDKLPQRGVDAWNAMIVA 80
Query: 133 YTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
Y++ Y + +L L +M+ +G + D +FT A A K+LE G++I ++ GYG
Sbjct: 81 YSRR--YHLTEVLNLYHQMVNEGGKPDSSTFTVAIKASSSLKDLEAGERIWRRAVDFGYG 138
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM 246
V VG+ +++ Y KC +A VF +M R+V+ W TMI+ N +AV +F+ M
Sbjct: 139 CDVFVGSSVLNLYVKCGKIDEAKLVFDKMVKRDVVCWATMITGLVQNGNVLEAVDMFRRM 198
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC-LITMYARFES 305
R +G+ + V +GL+ A + +K G +HG ++ L + + L+ MYA+
Sbjct: 199 RKEGIEGDGVLMLGLVQACANLGELKLGLSVHGHAVRREMLMDDVILQTSLVDMYAKIGD 258
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNA 364
++ + +VF+++ + +SW ALISG+AQNG + A+ + E KP+ S L
Sbjct: 259 LELASRVFEQMPRKNAVSWGALISGFAQNGFAEYALDLLVEMQSLEFKPDTAVLVSAL-- 316
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+ ++ LK G+ H +I++ L + ++G+AL+DMY K GS+ + +F+ +
Sbjct: 317 LACSQVGHLKLGKSIHGYIVR-RLGFELVLGTALIDMYAKCGSLSCAHAIFDRVDSRDVI 375
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W +I++ HGD + V++ F +M+ + PD TF S+L+ +G + G++ F++M
Sbjct: 376 LWNTMIASYGIHGDGKEVLSLFLKMKEANISPDHATFASLLSALSHSGQVDVGQYWFNAM 435
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+ + I PS HY+CMVD+ R GR+EEA +L+ + PGL++ +LL C + N+
Sbjct: 436 VNECKIPPSEKHYACMVDLFSRAGRVEEAYQLIESMNTEPGLAIWVALLSGCHNYRNLLF 495
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
GE A ++ + P G Y L+SN ++ W+ V+ILRK MK G++K G+S +V
Sbjct: 496 GEVAAKKILDLNPDDLGIYALVSNFFSLARMWDRVSILRKIMKETGMKKVPGYSAVEV-- 553
Query: 605 IDGLH-GFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
+G H F D H + EEI +M + L +EM+ +
Sbjct: 554 -NGKHEAFLVEDKNHHQYEEILQMLDSLDNEMRVI 587
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 178/341 (52%), Gaps = 13/341 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+N+Y K G+ D+A +F+ + D+V W T+++G ++ +A+ RM G+ D
Sbjct: 148 LNLYVKCGKIDEAKLVFDKMVKRDVVCWATMITGLVQNGNVLEAVDMFRRMRKEGIEGDG 207
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
V + C + GL +H V+ L +V + +L+ MY++ G L A RVF+
Sbjct: 208 VLMLGLVQACANLGELKLGLSVHGHAVRREMLMDDVILQTSLVDMYAKIGDLELASRVFE 267
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+MP K++VSW A++SG+ Q+G + A+ L+EM + D SA AC +L+
Sbjct: 268 QMPRKNAVSWGALISGFAQNG-FAEYALDLLVEMQSLEFKPDTAVLVSALLACSQVGHLK 326
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
LGK IHG ++ G + +G L+ Y+KC A+ +F R+ R+VI W TMI+
Sbjct: 327 LGKSIHGYIVRR-LGFELVLGTALIDMYAKCGSLSCAHAIFDRVDSRDVILWNTMIASYG 385
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM-IHGLCIKTNFLSEP 290
+ ++ +SLF +M+ + P+ TF L+ A+S V G+ + + +
Sbjct: 386 IHGDGKEVLSLFLKMKEANISPDHATFASLLSALSHSGQVDVGQYWFNAMVNECKIPPSE 445
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG 330
C++ +++R ++++ ++ + ++ ++ W AL+SG
Sbjct: 446 KHYACMVDLFSRAGRVEEAYQLIESMNTEPGLAIWVALLSG 486
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 214/441 (48%), Gaps = 18/441 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y + G A +F+ L + +WN ++ + + + L+ +M G D+ T+
Sbjct: 50 YARIGGITSARHLFDKLPQRGVDAWNAMIVAYSRRYHLTEVLNLYHQMVNEGGKPDSSTF 109
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ A+ + G ++ V FG +V+VG++++ +Y + G++ EA+ VFD+M
Sbjct: 110 TVAIKASSSLKDLEAGERIWRRAVDFGYGCDVFVGSSVLNLYVKCGKIDEAKLVFDKMVK 169
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D V W +++G Q+G+ +EA+ M ++G+ D V AC + L+LG
Sbjct: 170 RDVVCWATMITGLVQNGNV-LEAVDMFRRMRKEGIEGDGVLMLGLVQACANLGELKLGLS 228
Query: 181 IHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED- 238
+HG +++ V + L+ Y+K A++VF +M +N +SW +IS ++
Sbjct: 229 VHGHAVRREMLMDDVILQTSLVDMYAKIGDLELASRVFEQMPRKNAVSWGALISGFAQNG 288
Query: 239 ----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
A+ L EM+ P+ + + A S +K G+ IHG ++ E +
Sbjct: 289 FAEYALDLLVEMQSLEFKPDTAVLVSALLACSQVGHLKLGKSIHGYIVR-RLGFELVLGT 347
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-- 352
LI MYA+ S+ + +FD + R++I WN +I+ Y +G V + F +KE+
Sbjct: 348 ALIDMYAKCGSLSCAHAIFDRVDSRDVILWNTMIASYGIHG-DGKEVLSLFLKMKEANIS 406
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSIFES 411
P+ TF S+L+A+ + + + GQ + ++ + + + ++D++ + G + E+
Sbjct: 407 PDHATFASLLSALSHSGQVDV--GQYWFNAMVNECKIPPSEKHYACMVDLFSRAGRVEEA 464
Query: 412 QRVFNETQEKSEFA-WTAIIS 431
++ + A W A++S
Sbjct: 465 YQLIESMNTEPGLAIWVALLS 485
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 174/460 (37%), Positives = 278/460 (60%), Gaps = 13/460 (2%)
Query: 179 KQIHGVSIKMGYG-THVSVGNVLMSTY-SKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
+QIH SI+ G T+ +G L+ T S C A+++F ++ + N+ +W TMI
Sbjct: 57 RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
S N A+ L+++M + + P+ T+ L+ AI+ V+EG +H + I+ F S
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKE 350
V N L+ MYA + + K+F+ ++ R +++WN++I+GYA NG A+ F + ++
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRG 236
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+P+ +T S+L+A AE +L G+R H +++KVGLD + G+ALLD+Y K GSI +
Sbjct: 237 VEPDGFTMVSLLSA--CAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQ 294
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ +VF+E +EKS +WT++I LA +G + + FKE+E KG+ P ITF+ VL C
Sbjct: 295 AHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSH 354
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
GM+ +G F M ++Y I P +HY CMVD+LGR G +++A E + +P P V +
Sbjct: 355 CGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWR 414
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGAC IHG++ +GE L+++EP SG YVL+SNLYA + W V +R+ M +G
Sbjct: 415 TLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREG 474
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY-RMAE 629
V+K G S ++ + LH F GD +HP++EEIY ++AE
Sbjct: 475 VKKTPGHSLVELR--NRLHEFVMGDRSHPQTEEIYVKLAE 512
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 154/267 (57%), Gaps = 9/267 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
IF+ + NP+I +WNT++ G+ +S++ AL +M++ + D TY L
Sbjct: 96 IFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMD 155
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G ++HS+ ++ G +S V+V N L+ MY+ G A ++F+ M ++ V+WN++++G
Sbjct: 156 VREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVING 215
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Y +G EA+ EM +G+ D + S SAC L LG++ H +K+G
Sbjct: 216 YALNGRPN-EALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDG 274
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMR 247
++ GN L+ Y+KC A+KVF M +++V+SWT++I ++N ++A+ LFKE+
Sbjct: 275 NLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELE 334
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEG 274
G+ P+++TF+G+++A S +V EG
Sbjct: 335 RKGLMPSEITFVGVLYACSHCGMVDEG 361
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 187/389 (48%), Gaps = 18/389 (4%)
Query: 78 QLHSLIVKFGLD-SEVYVGNALI-TMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
Q+H+ ++ G+ + +G LI T+ S + A ++F ++ N + +WN ++ GY +
Sbjct: 58 QIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAE 117
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+ + A+ +M + D ++ A ++ G+++H ++I+ G+ + V
Sbjct: 118 SEN-PMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMRLDG 250
V N L+ Y+ C A+K+F M +RN+++W ++I ++N +A++LF+EM L G
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRG 236
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V P+ T + L+ A + + GR H +K N L+ +YA+ S++ +
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAH 296
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVG--A 367
KVFDE+ + ++SW +LI G A NG A++ F + ++ P+ TF VL A
Sbjct: 297 KVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCG 356
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR-VFNETQEKSEFAW 426
D + +R + G+ ++D+ G+ G + ++ + N + + W
Sbjct: 357 MVDEGFDYFKRMKE---EYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVW 413
Query: 427 TAIISALARHGDY---ESVMNQFKEMENK 452
++ A HG E Q ++E K
Sbjct: 414 RTLLGACTIHGHLALGEVARAQLLQLEPK 442
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY G + A +F + ++V+WN+V++G+ + ++AL+ M L GV D
Sbjct: 182 VHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDG 241
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + LS C + G + H +VK GLD ++ GNAL+ +Y++ G + +A +VFDE
Sbjct: 242 FTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDE 301
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
M K VSW +++ G +G +G EA+ E+ RKGL ++F AC H
Sbjct: 302 MEEKSVVSWTSLIVGLAVNG-FGKEALELFKELERKGLMPSEITFVGVLYACSH 354
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/584 (32%), Positives = 309/584 (52%), Gaps = 23/584 (3%)
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
+L F + H+ Q HS I+ GL + LI Y+ +R VFD + +K+
Sbjct: 29 SLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKN 88
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
WN++++GY ++ Y EA +M + D + ++ + L GK IH
Sbjct: 89 VFLWNSLINGYAKNRLYN-EAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIH 147
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--------M 234
G SI++G+ + V N +MS Y KC ++ KVF M RN SW +I+
Sbjct: 148 GKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCN 207
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK--EGRMIHGLCIKTNFL----S 288
RE+ K+M++D V P+ T L+ + G+ K GR +H +K + S
Sbjct: 208 FREETWEFVKQMQMDEVRPDAYTISSLL-PLCDGDKGKWDYGRELHCYIVKNELVLGLDS 266
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FG 346
+ + CLI MY+R + +VFD + CR + SW A+I+GY +NG S A+ F
Sbjct: 267 DVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQ 326
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
VI +PN + SVL A + L G++ H ++ L+++ + +AL+DMY K G
Sbjct: 327 VIDGIEPNRVSLVSVLPACSSFS--GLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCG 384
Query: 407 SIFESQRVF-NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
S+ ++RVF +++ K +W+++IS HG + + + +M G+RPD IT + +L
Sbjct: 385 SLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGIL 444
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C R+G++++G +++ S++ DY IEP+ + ++C+VDMLGR G+L+ A + + +P PG
Sbjct: 445 SACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPG 504
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
SV +L+ IHG++EM E L+++EP +YV +SNLYA W+ VA +R+
Sbjct: 505 PSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRM 564
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
MK K +RK G SW + + H F D HP + IY M +
Sbjct: 565 MKDKRLRKVPGCSWISIN--NKTHCFYVADKAHPSATSIYNMLD 606
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 237/446 (53%), Gaps = 24/446 (5%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F++L + ++ WN++++G+ K+ ++A +M V+ D T ST LS G
Sbjct: 80 VFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLST-LSKVSSELG 138
Query: 73 FLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
LF G +H ++ G S+ V N++++MY + G E+R+VFDEM ++S SWN +++
Sbjct: 139 ALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIA 198
Query: 132 GYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASAC-GHEKNLELGKQIHGVSIK- 187
GY G ++ E + +M +R D + +S C G + + G+++H +K
Sbjct: 199 GYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKN 258
Query: 188 ---MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDA 239
+G + V +G L+ YS+ +VF RM RNV SWT MI + + ++A
Sbjct: 259 ELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEA 318
Query: 240 VSLFKEMR-LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
+SLF++M+ +DG+ PN V+ + ++ A S + + GR IHG ++ +E S+CN LI
Sbjct: 319 LSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALID 378
Query: 299 MYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
MY++ S+ + +VF++ S C++ ISW+++ISGY +G A+ + +++ +P+
Sbjct: 379 MYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMI 438
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
T +L+A + ++ G +S +I G++ + + ++DM G+ G + +
Sbjct: 439 TTVGILSACSRSGLVN--EGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFI 496
Query: 416 NETQ-EKSEFAWTAIISALARHGDYE 440
E W A++S HGD E
Sbjct: 497 KAMPVEPGPSVWGALVSCSIIHGDLE 522
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 197/391 (50%), Gaps = 25/391 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS------DDALSFALRMNLIGVV 54
M+MYCK G F+++ +F+ + + SWN +++G+ S ++ F +M + V
Sbjct: 166 MSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVR 225
Query: 55 FDAVTYSTALSFCLDHEG-FLFGLQLHSLIVK----FGLDSEVYVGNALITMYSRWGRLV 109
DA T S+ L C +G + +G +LH IVK GLDS+V++G LI MYSR ++V
Sbjct: 226 PDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVV 285
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR--KGLRLDHVSFTSAAS 167
RRVFD M ++ SW A+++GY ++GD + L+L M+ G+ + VS S
Sbjct: 286 VGRRVFDRMKCRNVFSWTAMINGYVENGD--SDEALSLFRDMQVIDGIEPNRVSLVSVLP 343
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVI 226
AC L G+QIHG +++ VS+ N L+ YSKC A +VF ++ I
Sbjct: 344 ACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAI 403
Query: 227 SWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
SW++MIS ++A+ L+ +M G+ P+ +T +G++ A S LV EG I+
Sbjct: 404 SWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSV 463
Query: 282 IKTNFLSEPS--VCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNGLSL 338
I ++ EP+ + C++ M R + + + S W AL+S +G
Sbjct: 464 I-NDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLE 522
Query: 339 AAVQAFFGVIKESKPNAYTFGSVLNAVGAAE 369
A+ +I+ N + S+ N ++
Sbjct: 523 MQELAYRFLIQLEPENPSNYVSISNLYASSR 553
>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 703
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 192/615 (31%), Positives = 318/615 (51%), Gaps = 63/615 (10%)
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVS--------W 126
G+QLH+L + GL + L+++Y+ L +P+ SV+ +
Sbjct: 91 LGVQLHALSLSLGLSRHPILLPRLLSVYTSHPSL---------LPSAASVAADSTLPLPY 141
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSI 186
N ++S + G ++A+ A EM + G+ D ++ S AC + L LG+ +H +
Sbjct: 142 NVLISSCLRHG-LPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAA 200
Query: 187 KMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVS 241
G ++ N LMS Y+KC A KVF M R+V+SW +MIS +A+
Sbjct: 201 GAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAME 260
Query: 242 LFKEMRLDGVCPNDVTF----------------IGLI-------------------HAIS 266
LF+ MR +G N VT+ +GLI +A S
Sbjct: 261 LFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNACS 320
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNA 326
++ G+ IHGL ++ SV N LITMYAR + M+ + +F L C +++WN
Sbjct: 321 RVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTWNT 380
Query: 327 LISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK 385
++S +A + + A F +I + KPN T + L A +L+HGQ H HI+K
Sbjct: 381 MLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLAL--CARVANLQHGQELHGHIVK 438
Query: 386 VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQ 445
G ++ ++L+DMY K G + +Q VF+ + ++T++I+ G +
Sbjct: 439 HGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRL 498
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLG 505
F++M + G++PD I ++VL+ C +G++ +G LF+ M+ Y I+P +HYSCM+D+
Sbjct: 499 FEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCMIDLYA 558
Query: 506 RVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVL 565
R G LE+AEE++ P P ++ +L+GAC GN+E+GER A L++M +G YVL
Sbjct: 559 RAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERAARKLLEMRTENAGHYVL 618
Query: 566 MSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
++N+YA G W+ +A +RK M+ GV K G +W D+G +G F GD ++P + EIY
Sbjct: 619 IANMYAAAGCWDELATVRKLMRDLGVTKAPGLAWTDLG--NGFTPFLVGDRSNPLAPEIY 676
Query: 626 RMAECLGSEMKYLNS 640
+ + L +M+ +N+
Sbjct: 677 VVLDELSEQMRNINN 691
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 213/442 (48%), Gaps = 42/442 (9%)
Query: 40 DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALI 99
AL+ M GV+ D TY + L C + + G +H G+D ++ NAL+
Sbjct: 156 QALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALM 215
Query: 100 TMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG-------------DYGVE---- 142
+MY++ G L AR+VFD M +D VSWN+++S Y G D G E
Sbjct: 216 SMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEVNSV 275
Query: 143 ----------------AILALI-EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVS 185
A + LI EM+R G +D+V+ +AC L LGK+IHG++
Sbjct: 276 TWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLA 335
Query: 186 IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAV 240
++M SV N L++ Y++C+ A +FR + V++W TM+S E+A
Sbjct: 336 VRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEAS 395
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
S+F+EM GV PN VT + + + ++ G+ +HG +K F + N LI MY
Sbjct: 396 SIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMY 455
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFG 359
++ + ++ VFD + ++IS+ ++I+GY G A++ F +I KP+
Sbjct: 456 SKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMV 515
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
+VL+A + + L+ + + +I G+ S ++D+Y + G + +++ + + T
Sbjct: 516 TVLSAC-SHSGLVLEGEELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTP 574
Query: 420 -EKSEFAWTAIISALARHGDYE 440
+ W A++ A G+ E
Sbjct: 575 FPPTSTMWAALVGACHDRGNIE 596
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 173/396 (43%), Gaps = 63/396 (15%)
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTY--------SKCEVTGDANKVFRRMHD 222
H +L LG Q+H +S+ +G H + L+S Y S V D+
Sbjct: 85 HRSHLRLGVQLHALSLSLGLSRHPILLPRLLSVYTSHPSLLPSAASVAADSTLPL----P 140
Query: 223 RNVISWTTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH---- 278
NV+ + + A++ ++EM +GV P+ T+ ++ A + + GR +H
Sbjct: 141 YNVLISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAA 200
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
G + N + N L++MYA+ + + KVFD + R+++SWN++IS YA G
Sbjct: 201 GAGMDGNLFFQ----NALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWA 256
Query: 339 AAVQAFFGVIKE-SKPNAYTFGSVLN----------AVGAAEDIS--------------- 372
A++ F + E ++ N+ T+ ++ AVG ++
Sbjct: 257 EAMELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGL 316
Query: 373 --------LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
L+ G+ H +++ D V +AL+ MY + + ++ +F +
Sbjct: 317 NACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVV 376
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR----HL 480
W ++S+ A E + F+EM +GV+P+ +T ++ L +C R + G+ H+
Sbjct: 377 TWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHI 436
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
K Y + ++ ++DM + GRL A+ +
Sbjct: 437 VKHGFKGYRLL-----WNSLIDMYSKSGRLSVAQNV 467
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY + + A +F L P +V+WNT+LS F SD +A S M GV +
Sbjct: 351 ITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNY 410
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT T L+ C G +LH IVK G + N+LI MYS+ GRL A+ VFD
Sbjct: 411 VTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDT 470
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + D +S+ ++++GY G G A+ +M+ G++ DH+ + SAC H +
Sbjct: 471 MDDCDMISYTSMIAGYGMQGK-GTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLE 529
Query: 178 GKQI 181
G+++
Sbjct: 530 GEEL 533
>gi|356528451|ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 579
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 309/561 (55%), Gaps = 31/561 (5%)
Query: 75 FGLQLHSLIVK---FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
F Q HS V F +VY N I SR G++ AR++FDEM KD V+WN++LS
Sbjct: 9 FWRQRHSFFVLATLFSSTRDVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLS 68
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
Y Q+G ++ AL M LR + VS+ S +AC NL+ + + +
Sbjct: 69 AYWQNG--LLQRSKALFHSM--PLR-NVVSWNSIIAACVQNDNLQDAFRYLAAAPEKNAA 123
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE------DAVSLFKE 245
++ N ++S ++C DA ++F M NV+S+T M+ A +LF+
Sbjct: 124 SY----NAIISGLARCGRMKDAQRLFEAMPCPNVVSYTAMVDGYARVEGGIGRARALFEA 179
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
M N V+++ +I+ + L +E + + N ++ + +IT + +
Sbjct: 180 MPRR----NSVSWVVMINGLVENGLCEEAWEVFVRMPQKNDVARTA----MITGFCKEGR 231
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
M+D+ +F E+ CR+++SWN +++GYAQNG A+ F +I+ +P+ TF SV
Sbjct: 232 MEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEALNLFSQMIRTGMQPDDLTFVSVF-- 289
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+ A SL+ G + H+ +IK G DSD V +AL+ ++ K G I +S+ VF +
Sbjct: 290 IACASLASLEEGSKAHALLIKHGFDSDLSVCNALITVHSKCGGIVDSELVFGQISHPDLV 349
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+W II+A A+HG Y+ + F +M V+PD ITFLS+L+ C R G +++ +LF M
Sbjct: 350 SWNTIIAAFAQHGLYDKARSYFDQMVTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLM 409
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+ +Y I P +HY+C+VD++ R G+L+ A +++ ++P S+ ++L AC +H NVE+
Sbjct: 410 VDNYGIPPRSEHYACLVDVMSRAGQLQRACKIINEMPFKADSSIWGAVLAACSVHLNVEL 469
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
GE A ++ ++P SG+YV++SN+YA G W+ V +R MK +GV+K+ +SW +G
Sbjct: 470 GELAARRILNLDPFNSGAYVMLSNIYAAAGKWKDVHRIRVLMKEQGVKKQTAYSWLQIG- 528
Query: 605 IDGLHGFSSGDNTHPRSEEIY 625
+ H F GD +HP +I+
Sbjct: 529 -NKTHYFVGGDPSHPNINDIH 548
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 230/448 (51%), Gaps = 33/448 (7%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLS-----GFEKSDDALSFALRMNLIGVVFDAVTY 60
++G+ D A +F+ + D+V+WN++LS G + AL ++ + + V++
Sbjct: 41 RAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSKALFHSMPLR------NVVSW 94
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
++ ++ C+ ++ LQ + + NA+I+ +R GR+ +A+R+F+ MP
Sbjct: 95 NSIIAACVQND----NLQDAFRYLAAAPEKNAASYNAIISGLARCGRMKDAQRLFEAMPC 150
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+ VS+ A++ GY + + G+ AL E M + + V + G L ++
Sbjct: 151 PNVVSYTAMVDGYAR-VEGGIGRARALFEAMPRRNSVSWVVMINGLVENG------LCEE 203
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MN 235
V ++M V+ +++ + K DA +F+ + R+++SW +++
Sbjct: 204 AWEVFVRMPQKNDVA-RTAMITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGR 262
Query: 236 REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
E+A++LF +M G+ P+D+TF+ + A + ++EG H L IK F S+ SVCN
Sbjct: 263 GEEALNLFSQMIRTGMQPDDLTFVSVFIACASLASLEEGSKAHALLIKHGFDSDLSVCNA 322
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPN 354
LIT++++ + DSE VF ++S +++SWN +I+ +AQ+GL A F ++ S +P+
Sbjct: 323 LITVHSKCGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFDQMVTVSVQPD 382
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSIFESQR 413
TF S+L+A A ++ S ++ G+ + L+D+ + G + + +
Sbjct: 383 GITFLSLLSACCRAGKVN--ESMNLFSLMVDNYGIPPRSEHYACLVDVMSRAGQLQRACK 440
Query: 414 VFNETQEKSEFA-WTAIISALARHGDYE 440
+ NE K++ + W A+++A + H + E
Sbjct: 441 IINEMPFKADSSIWGAVLAACSVHLNVE 468
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 98/169 (57%), Gaps = 4/169 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
+CK G+ + A +F + D+VSWN +++G+ ++ ++AL+ +M G+ D +T+
Sbjct: 226 FCKEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEALNLFSQMIRTGMQPDDLTF 285
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ C G + H+L++K G DS++ V NALIT++S+ G +V++ VF ++ +
Sbjct: 286 VSVFIACASLASLEEGSKAHALLIKHGFDSDLSVCNALITVHSKCGGIVDSELVFGQISH 345
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
D VSWN I++ + Q G Y +A +M+ ++ D ++F S SAC
Sbjct: 346 PDLVSWNTIIAAFAQHGLYD-KARSYFDQMVTVSVQPDGITFLSLLSAC 393
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ ++ K G + +F +++PD+VSWNT+++ F + D A S+ +M + V D
Sbjct: 324 ITVHSKCGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFDQMVTVSVQPDG 383
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIV-KFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T+ + LS C + L SL+V +G+ L+ + SR G+L A ++ +
Sbjct: 384 ITFLSLLSACCRAGKVNESMNLFSLMVDNYGIPPRSEHYACLVDVMSRAGQLQRACKIIN 443
Query: 117 EMPNK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLD------HVSFTSAASAC 169
EMP K DS W A+L+ + + + + A R+ L LD +V ++ +A
Sbjct: 444 EMPFKADSSIWGAVLAACSVHLNVELGELAA-----RRILNLDPFNSGAYVMLSNIYAAA 498
Query: 170 GHEKNLE----------LGKQIHGVSIKMGYGTHVSVG 197
G K++ + KQ +++G TH VG
Sbjct: 499 GKWKDVHRIRVLMKEQGVKKQTAYSWLQIGNKTHYFVG 536
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 298/556 (53%), Gaps = 14/556 (2%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H+ ++K S+V+VG A + M+ + + A +VF+ MP +D+ +WNA+LSG+ Q G
Sbjct: 680 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG- 738
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+ +A EM + D V+ + + EK+L+L + +H V I++G V+V N
Sbjct: 739 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 798
Query: 199 VLMSTYSKCEVTGDANKVFRRMH--DRNVISWTTMISM-----NREDAVSLFKEMRLDGV 251
+STY KC A VF + DR V+SW +M DA L+ M +
Sbjct: 799 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 858
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ TFI L + + +GR+IH I + N I+MY++ E +
Sbjct: 859 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 918
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAED 370
+FD ++ R +SW +ISGYA+ G A+ F +IK KP+ T S+++ G
Sbjct: 919 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG- 977
Query: 371 ISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL+ G+ + G D + + +AL+DMY K GSI E++ +F+ T EK+ WT +
Sbjct: 978 -SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTM 1036
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I+ A +G + + F +M + +P+ ITFL+VL C +G + KG F M + Y+
Sbjct: 1037 IAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 1096
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I P DHYSCMVD+LGR G+LEEA EL+ + P + +LL AC+IH NV++ E+ A
Sbjct: 1097 ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAA 1156
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
++L +EP + YV M+N+YA G W+ A +R MK + ++K G S V + H
Sbjct: 1157 ESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN--H 1214
Query: 610 GFSSGDNTHPRSEEIY 625
F+ G++ H +E IY
Sbjct: 1215 SFTVGEHGHVENEVIY 1230
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 226/456 (49%), Gaps = 29/456 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M+ K D A +F + D +WN +LSGF +S D A S M L + D+
Sbjct: 700 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 759
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT T + + +H++ ++ G+D +V V N I+ Y + G L A+ VF+
Sbjct: 760 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 819
Query: 118 MPNKDS--VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ D VSWN++ Y+ G+ +A M+R+ + D +F + A++C + + L
Sbjct: 820 IDRGDRTVVSWNSMFKAYSVFGE-AFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETL 878
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G+ IH +I +G + N +S YSK E T A +F M R +SWT MIS
Sbjct: 879 TQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGY 938
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIH------AISIGNLVKEGRMIHGLCIKT 284
E +A++LF M G P+ VT + LI ++ G + I+G C +
Sbjct: 939 AEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG-CKRD 997
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
N + +CN LI MY++ S+ ++ +FD + +++W +I+GYA NG+ L A++ F
Sbjct: 998 NVM----ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 1053
Query: 345 FGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDM 401
+I + KPN TF +VL A A SL+ G + HI+K + P + S ++D+
Sbjct: 1054 SKMIDLDYKPNHITFLAVLQAC--AHSGSLEKGWE-YFHIMKQVYNISPGLDHYSCMVDL 1110
Query: 402 YGKRGSIFESQRVFNETQEKSEFA-WTAIISALARH 436
G++G + E+ + K + W A+++A H
Sbjct: 1111 LGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIH 1146
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 194/415 (46%), Gaps = 31/415 (7%)
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
+WN + D VE++L EM R G ++ +F A AC ++ + +H
Sbjct: 625 AWNLQIREAVNRND-PVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAH 683
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDA 239
IK + + V VG + + KC A KVF RM +R+ +W M+ S + + A
Sbjct: 684 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 743
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
SLF+EMRL+ + P+ VT + LI + S +K +H + I+ + +V N I+
Sbjct: 744 FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 803
Query: 300 YARFESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
Y + + ++ VF+ + R ++SWN++ Y+ G + A + +++E KP+
Sbjct: 804 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 863
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
TF ++ + E +L G+ HSH I +G D D + + MY K ++ +F+
Sbjct: 864 TFINLAASCQNPE--TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 921
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
++ +WT +IS A GD + + F M G +PD +T LS+++ CG+ G +
Sbjct: 922 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 981
Query: 477 GRHLFDSMLKDYHIEPSPDHYSC----------MVDMLGRVGRLEEAEELVGQIP 521
G+ I+ D Y C ++DM + G + EA ++ P
Sbjct: 982 GK----------WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 1026
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 194/618 (31%), Positives = 322/618 (52%), Gaps = 18/618 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++ Y K G A +F + D+VSWN ++ G+ ++ DAL ++M G
Sbjct: 95 LDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQMLREGFPPCQ 154
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + C + G +H +K GLD + V NAL +MY++ L A +F+E
Sbjct: 155 RTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEE 214
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ K VSWN ++ Y Q+G + EA+L +M ++ + +++V+ S SA H +
Sbjct: 215 IFEKTEVSWNTMIGAYGQNGLFD-EAMLVFKQMQKERVEVNYVTIISLLSANAHLDS--- 270
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
H IK G+ T SV L+ +Y+ C A ++ M RN++S T MIS E
Sbjct: 271 ---THCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAE 327
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
V F +M + P+ V + ++H + + G IH +KT ++ V
Sbjct: 328 KGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLV 387
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
N LI+MY++F ++ +F E+ +++ISWN++IS Q G + A++ F + +
Sbjct: 388 VNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGH 447
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P+A T S+L G +E L+ G+R H+++++ LD + + +AL+DMY K G + +
Sbjct: 448 SPDAITIASLL--AGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESA 505
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+RVF +E W +IS G ++ + EM+ +G++PD ITFL VL+ C
Sbjct: 506 ERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHG 565
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ +G+ F SM +D+ + P H +CMVD+L R G LEEA V + P ++ +
Sbjct: 566 GLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGA 625
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LL +C IH +++GE +A L+ ++ G YVLMSNLYA KG W+ VA +RK MK G
Sbjct: 626 LLTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLYASKGRWDDVARVRKMMKDTGG 685
Query: 592 RKEVGFSWADVGDIDGLH 609
G S +V ++ ++
Sbjct: 686 DGSSGISLIEVSSLEKMN 703
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 239/470 (50%), Gaps = 17/470 (3%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+ + + K G + VY+ A + Y + G + A+ +F+EMP +D VSWNA++ GY+++G
Sbjct: 74 QIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNG 133
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
Y +A+ ++M+R+G + +CG + GK IHG IK G V
Sbjct: 134 -YDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVK 192
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVC 252
N L S Y+KC A +F + ++ +SW TMI + +A+ +FK+M+ + V
Sbjct: 193 NALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVE 252
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
N VT I L+ A + H IKT F ++ SV L+ YA +++ + +
Sbjct: 253 VNYVTIISLLSANA------HLDSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAGLL 306
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDI 371
++ + R ++S A+ISGYA+ G V+ F +++ + KP+A S+L+ G +
Sbjct: 307 YNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILH--GFTDPT 364
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
+ G H++ +K GL +D +V + L+ MY K G I +F+E EK +W ++IS
Sbjct: 365 FIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVIS 424
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A + G M F +M G PD+IT S+L C G + G L + +L++ +++
Sbjct: 425 ACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRN-NLD 483
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+ +VDM + GRLE AE + I P L+ +++ + G+
Sbjct: 484 MEDFLETALVDMYIKCGRLESAERVFKSIK-EPCLATWNTMISGYGLSGH 532
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 186/562 (33%), Positives = 316/562 (56%), Gaps = 23/562 (4%)
Query: 79 LHSLIVKFGLDS--EVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
LH+ F L V+ N LI Y++ + ARRVFDE+P D VS+N +++ Y
Sbjct: 60 LHNAQTSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADR 119
Query: 137 GDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
G+ G L L E +R+ L LD + + +ACG ++ L +Q+H + G+ + S
Sbjct: 120 GECG--PTLRLFEEVRELRLGLDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYAS 175
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHD---RNVISWTTMI---SMNRE--DAVSLFKEMR 247
V N +++ YS+ +A +VFR M + R+ +SW MI +RE +AV LF+EM
Sbjct: 176 VNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMV 235
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE-SM 306
G+ + T ++ A + + GR HG+ IK+ F V + LI +Y++ SM
Sbjct: 236 RRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSM 295
Query: 307 QDSEKVFDELSCREIISWNALISGYA-QNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
+ KVF+E++ +++ WN +ISG++ LS + F + + +P+ +F V +A
Sbjct: 296 VECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSA 355
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSE 423
SL G++ H+ IK + + + V +AL+ MY K G++ +++RVF+ E +
Sbjct: 356 CSNLSSPSL--GKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNT 413
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
+ ++I+ A+HG + F+ M K + P+SITF++VL+ C G + +G+ F+
Sbjct: 414 VSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNM 473
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
M + + IEP +HYSCM+D+LGR G+L+EAE ++ +P PG +LLGACR HGNVE
Sbjct: 474 MKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVE 533
Query: 544 MGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG 603
+ + A+ +++EP + YV++SN+YA WE A +++ M+ +GV+K+ G SW ++
Sbjct: 534 LAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEID 593
Query: 604 DIDGLHGFSSGDNTHPRSEEIY 625
+H F + D +HP +EI+
Sbjct: 594 --KKVHVFVAEDTSHPMIKEIH 613
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 145/477 (30%), Positives = 249/477 (52%), Gaps = 27/477 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA---LSFALRMNLIGVVFDA 57
+N Y K A +F+ + PDIVS+NT+++ + + L + + + D
Sbjct: 82 INAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDG 141
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S ++ C D G + QLH +V G D V NA++ YSR G L EARRVF E
Sbjct: 142 FTLSGVITACGDDVGLV--RQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFRE 199
Query: 118 MPN---KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
M +D VSWNA++ Q + G+EA+ EM+R+GL++D + S +A K+
Sbjct: 200 MGEGGGRDEVSWNAMIVACGQHRE-GMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKD 258
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG-DANKVFRRMHDRNVISWTTMIS 233
L G+Q HG+ IK G+ + VG+ L+ YSKC + + KVF + +++ W TMIS
Sbjct: 259 LVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMIS 318
Query: 234 MN------REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF- 286
ED + F+EM+ +G P+D +F+ + A S + G+ +H L IK++
Sbjct: 319 GFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVP 378
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ SV N L+ MY++ ++ D+ +VFD + +S N++I+GYAQ+G+ + +++ F
Sbjct: 379 YNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFEL 438
Query: 347 VI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYG 403
++ K+ PN+ TF +VL+A ++ GQ+ + +++K +P S ++D+ G
Sbjct: 439 MLEKDIAPNSITFIAVLSA--CVHTGKVEEGQK-YFNMMKERFCIEPEAEHYSCMIDLLG 495
Query: 404 KRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE---SVMNQFKEMENKGVRP 456
+ G + E++R+ W ++ A +HG+ E N+F +E P
Sbjct: 496 RAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAP 552
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 39/265 (14%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
TF L+ A + G+++H L K+ + N +Y++ S+ +++ F
Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAF------------------------------FG 346
+ S+N LI+ YA++ L A + F F
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130
Query: 347 VIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
++E + + +T V+ A G +D+ L ++ H ++ G D V +A+L Y +
Sbjct: 131 EVRELRLGLDGFTLSGVITACG--DDVGLV--RQLHCFVVVCGHDCYASVNNAVLACYSR 186
Query: 405 RGSIFESQRVFNETQE---KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
+G + E++RVF E E + E +W A+I A +H + + F+EM +G++ D T
Sbjct: 187 KGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTM 246
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLK 486
SVLT + GR M+K
Sbjct: 247 ASVLTAFTCVKDLVGGRQFHGMMIK 271
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 185/576 (32%), Positives = 308/576 (53%), Gaps = 20/576 (3%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G+QLH I K G S+ +GN LI MY + G L A VF M +++ VSW A++ G+ +
Sbjct: 23 GVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLR 82
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAAS--ACGHEKNLELGKQIHGVSIKMGYGTH 193
GD L L+ MR +T +AS AC + G IHG+ ++ GY H
Sbjct: 83 HGD--ATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEH 140
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMISM-----NREDAVSLFKEMR 247
V + L+ YSK GDA +VF + +W M+S + DA+ +F+EMR
Sbjct: 141 DVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMR 200
Query: 248 L-DGV-CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF--LSEPSVCNCLITMYARF 303
+G P++ TF L+ A S +EG +H + F S + L+ MY +
Sbjct: 201 RHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKC 260
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVL 362
+ + +VF+ L + +I W A++ G+AQ G A++ F + ++P+++ SV
Sbjct: 261 RRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSV- 319
Query: 363 NAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
VG D +L + G++ H + IK +D G++++DMY K G E++R+F E +
Sbjct: 320 --VGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAP 377
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+ +WT +++ L +HG + F+EM GV PD +T+L++L+ C G++ + R F
Sbjct: 378 NVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYF 437
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+ +D + P +HY+CMVD+LGR G L EA +L+ +P P + V Q+LL ACR+H +
Sbjct: 438 SCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKD 497
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
V +G D L+ M+ +YV +SN+ AE G+W +R M+ +G++K+ G SW +
Sbjct: 498 VAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVE 557
Query: 602 VG-DIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
VG ++ +G + THP++ +I R+ + + M+
Sbjct: 558 VGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMR 593
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 215/457 (47%), Gaps = 24/457 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAV-- 58
++MY K G+ D A +F + + ++VSW ++ GF + DA + + +A
Sbjct: 46 IDMYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPN 105
Query: 59 --TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T S +L C G+ +H L V+ G V ++L+ +YS+ GR+ +ARRVFD
Sbjct: 106 EYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFD 165
Query: 117 EMPNKDSV-SWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEK 173
+ +WNA++SGY G +G +A+L EM R + D +F S AC
Sbjct: 166 GAGLGSGIATWNAMVSGYAHAG-HGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLG 224
Query: 174 NLELGKQIHGVSIKMGYGT--HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
G Q+H G+ T + + L+ Y KC A +VF R+ +NVI WT +
Sbjct: 225 ATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAV 284
Query: 232 ISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+ + + +A+ LF+ G P+ ++ ++ LV++GR +H IK
Sbjct: 285 VVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPT 344
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
++ S N ++ MY + ++E++F E+ ++SW +++G ++GL AV A F
Sbjct: 345 GTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAV-ALFE 403
Query: 347 VIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMY 402
++ +P+ T+ ++L+A A L R + I+ P + ++D+
Sbjct: 404 EMRAGGVEPDEVTYLALLSACSHA---GLVDECRRYFSCIRRDRTVRPKAEHYACMVDLL 460
Query: 403 GKRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGD 438
G+ G + E++ + E + W ++SA H D
Sbjct: 461 GRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKD 497
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 174/364 (47%), Gaps = 21/364 (5%)
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
A +L G Q+HG KMG+G+ +GN L+ Y KC A +VF M DRNV+S
Sbjct: 13 ASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVS 72
Query: 228 WTTMIS--MNREDA---VSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
WT ++ + DA + L EMR PN+ T + A + G IHGLC
Sbjct: 73 WTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLC 132
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISGYAQNGLSLAA 340
++ + V + L+ +Y++ + D+ +VFD I +WNA++SGYA G A
Sbjct: 133 VRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDA 192
Query: 341 VQAFFGVIK---ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD--SDPIVG 395
+ F + + + +P+ +TF S+L A + + G + H+ + G S+ I+
Sbjct: 193 LLVFREMRRHEGQHQPDEFTFASLLKACSGLG--ATREGAQVHAAMTASGFSTASNAILA 250
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
AL+DMY K + + +VF + K+ WTA++ A+ G + F+ G R
Sbjct: 251 GALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGAR 310
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC---MVDMLGRVGRLEE 512
PDS SV+ V ++ +GR + +KD P+ S +VDM + G +E
Sbjct: 311 PDSHVLSSVVGVLADFALVEQGRQVHCYGIKD----PTGTDVSAGNSIVDMYLKCGLPDE 366
Query: 513 AEEL 516
AE +
Sbjct: 367 AERM 370
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 9/231 (3%)
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
GL+ A + + ++ G +HG K F S+ + N LI MY + + + +VF + R
Sbjct: 9 GLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDR 68
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIK---ESKPNAYTFGSVLNAVGAAEDISLKHG 376
++SW AL+ G+ ++G + ++ G ++ E+ PN YT + L A D + G
Sbjct: 69 NVVSWTALMVGFLRHGDATGCLR-LLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVG 127
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALAR 435
H ++ G +V S+L+ +Y K G I +++RVF+ S A W A++S A
Sbjct: 128 --IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAH 185
Query: 436 HGDYESVMNQFKEM-ENKGV-RPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
G + F+EM ++G +PD TF S+L C G +G + +M
Sbjct: 186 AGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAM 236
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 321/612 (52%), Gaps = 22/612 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+++Y G A +F+ + PD W +L + + +++ +L+ G +D
Sbjct: 83 VSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDD 142
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKF-GLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ +S AL C + + G ++H +VK D+ V G L+ MY++ G + A +VF+
Sbjct: 143 IVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFN 200
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
++ ++ V W ++++GY ++ D E ++ M + + ++ + AC L
Sbjct: 201 DITLRNVVCWTSMIAGYVKN-DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALH 259
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
GK HG +K G + L+ Y KC +A +VF +++ WT MI
Sbjct: 260 QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
S+N +A+SLF++M+ + PN VT ++ + ++ GR +HGL IK + +
Sbjct: 320 HNGSVN--EALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG-IWD 376
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+V N L+ MYA+ +D++ VF+ S ++I++WN++ISG++QNG A+ F +
Sbjct: 377 TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNS 436
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL--DSDPIVGSALLDMYGKRG 406
ES PN T S+ +A + SL G H++ +K+G S VG+ALLD Y K G
Sbjct: 437 ESVTPNGVTVASLFSACASLG--SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
++ +F+ +EK+ W+A+I + GD + F+EM K +P+ TF S+L+
Sbjct: 495 DPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILS 554
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
CG GM+++G+ F SM KDY+ PS HY+CMVDML R G LE+A +++ ++P P +
Sbjct: 555 ACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV 614
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
+ L C +H ++GE + ++ + P + YVL+SNLYA G W +R M
Sbjct: 615 RCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLM 674
Query: 587 KSKGVRKEVGFS 598
K +G+ K G S
Sbjct: 675 KQRGLSKIAGHS 686
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 155/547 (28%), Positives = 256/547 (46%), Gaps = 56/547 (10%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q H ++ GL ++ + L+++Y +G +AR VFD++P D W +L Y +
Sbjct: 62 QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNK 121
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ VE + +M+ G R D + F+ A AC ++L+ GK+IH +K+ +V +
Sbjct: 122 E-SVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLT 180
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVC 252
L+ Y+KC A+KVF + RNV+ WT+MI+ E+ + LF MR + V
Sbjct: 181 G-LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
N+ T+ LI A + + + +G+ HG +K+ + L+ MY + + ++ +V
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 313 FDELSCREIISWNALISGYAQNGL---SLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAE 369
F+E S +++ W A+I GY NG +L+ Q GV E KPN T SVL+ G E
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV--EIKPNCVTIASVLSGCGLIE 357
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
++ L G+ H IKVG+ D V +AL+ MY K +++ VF EK AW +I
Sbjct: 358 NLEL--GRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSI 414
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG----------------- 472
IS +++G + F M ++ V P+ +T S+ + C G
Sbjct: 415 ISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGF 474
Query: 473 ----MIHKGRHLFDSMLK-----------DYHIEPSPDHYSCMVDMLGR----VGRLEEA 513
+H G L D K D E + +S M+ G+ +G LE
Sbjct: 475 LASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELF 534
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK---MEPAGSGSYVLMSNLY 570
EE++ + P S S+L AC G V G++ ++ K P+ + Y M ++
Sbjct: 535 EEMLKK-QQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS-TKHYTCMVDML 592
Query: 571 AEKGDWE 577
A G+ E
Sbjct: 593 ARAGELE 599
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 116/246 (47%), Gaps = 5/246 (2%)
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
R HG+ + + S+ L+++Y F +D+ VFD++ + W ++ Y N
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 335 GLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
S+ V+ + ++K + + F L A +D L +G++ H ++KV D +
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQD--LDNGKKIHCQLVKVP-SFDNV 177
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
V + LLDMY K G I + +VFN+ ++ WT++I+ ++ E + F M
Sbjct: 178 VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENN 237
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
V + T+ +++ C + +H+G+ ++K IE S + ++DM + G + A
Sbjct: 238 VLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS-GIELSSCLVTSLLDMYVKCGDISNA 296
Query: 514 EELVGQ 519
+ +
Sbjct: 297 RRVFNE 302
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
++ H + GL D + + L+ +YG G +++ VF++ E + W ++ +
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
+ V+ + + G R D I F L C + G+ + ++K PS D+
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK----VPSFDN 176
Query: 497 --YSCMVDMLGRVGRLEEAEELVGQI 520
+ ++DM + G ++ A ++ I
Sbjct: 177 VVLTGLLDMYAKCGEIKSAHKVFNDI 202
>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 607
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 192/594 (32%), Positives = 309/594 (52%), Gaps = 13/594 (2%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D TY L C FG +H +VK G D V AL MY A ++F
Sbjct: 9 DEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLF 68
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D+ KD + W + L+ D G M+ + L D +F + ++
Sbjct: 69 DKRSVKD-LGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSI 127
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-M 234
+L K +H ++I + V ++S YSK DA K+F +M +++ + W MI+
Sbjct: 128 QLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAY 187
Query: 235 NRE----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
RE + + LFK M G+ + T + +I +I+ V G+ H ++ S+
Sbjct: 188 AREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQV 247
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
SV N LI MY + + + K+F+ ++ + +ISW+A+I GY +NG SL A+ + F +K
Sbjct: 248 SVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTAL-SLFSKMKS 306
Query: 351 SKPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
A F ++N + A I +L++ + H + +K+GL S P + +ALL Y K GSI
Sbjct: 307 DGIQA-DFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 365
Query: 410 ESQRVFNETQ--EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+QR+F E + +K W ++ISA A HGD+ + M+ +PD +TFL +LT
Sbjct: 366 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 425
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C +G++ KG+ F M + Y +PS +HY+CMV++LGR G + EA ELV +P P
Sbjct: 426 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 485
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V LL AC++H ++ E A+ L+ MEP +G+Y+L+SN+YA G W+ VA +R ++
Sbjct: 486 VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR 545
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSK 641
+KG++K G SW ++ + F D THPR+ +IY + L E+K + K
Sbjct: 546 NKGLKKIPGCSWLEIN--GHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREK 597
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 197/376 (52%), Gaps = 18/376 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLS--GFEKSDDALSFAL--RMNLIGVVFDAV 58
MY + +F+ A +F+ + D+ W + L+ G + + F + RM +V D+
Sbjct: 54 MYEECIEFENAHQLFDKRSVKDL-GWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSF 112
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ L F +H + + L ++ V A++++YS+ LV+AR++FD+M
Sbjct: 113 TFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKM 172
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
P KD V WN +++ Y ++G E + M R G+R D + S+ K ++ G
Sbjct: 173 PEKDRVVWNIMIAAYAREGK-PTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWG 231
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED 238
KQ H ++ G + VSV N L+ Y +C++ A K+F M D++VISW+ MI ++
Sbjct: 232 KQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKN 291
Query: 239 -----AVSLFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
A+SLF +M+ DG+ + V I ++ A + IG L + + +HG +K S PS+
Sbjct: 292 GQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGAL-ENVKYLHGYSMKLGLTSLPSL 350
Query: 293 CNCLITMYARFESMQDSEKVFDE--LSCREIISWNALISGYAQNGLSLAAVQAFFGVIK- 349
L+ YA+ S++ ++++F+E + +++I WN++IS +A +G + + +K
Sbjct: 351 NTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHG-DWSQCFKLYNRMKC 409
Query: 350 -ESKPNAYTFGSVLNA 364
SKP+ TF +L A
Sbjct: 410 SNSKPDQVTFLGLLTA 425
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 188/374 (50%), Gaps = 11/374 (2%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M+ K + D ++ +C N+ G+ IHG +K+G+ V L Y +C
Sbjct: 1 MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIE 60
Query: 210 TGDANKVFRRMHDRNVISWTTMISM------NREDAVSLFKEMRLDGVCPNDVTFIGLIH 263
+A+++F + ++ + W + ++ N E +F M + + P+ TF L+
Sbjct: 61 FENAHQLFDKRSVKD-LGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLR 119
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
I+ N ++ +++H + I + + V ++++Y++ S+ D+ K+FD++ ++ +
Sbjct: 120 FIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVV 179
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
WN +I+ YA+ G ++ F + + + + +T V++++ A+ + G++ H+H
Sbjct: 180 WNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSI--AQLKCVDWGKQTHAH 237
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
I++ G DS V ++L+DMY + + + ++FN +KS +W+A+I ++G +
Sbjct: 238 ILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTA 297
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
++ F +M++ G++ D + +++L G + ++L +K + P + ++
Sbjct: 298 LSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMK-LGLTSLPSLNTALLI 356
Query: 503 MLGRVGRLEEAEEL 516
+ G +E A+ L
Sbjct: 357 TYAKCGSIEMAQRL 370
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 11/285 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+++Y K A +F+ + D V WN +++ + K + L M G+ D
Sbjct: 153 LSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDL 212
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T +S + +G Q H+ I++ G DS+V V N+LI MY L A ++F+
Sbjct: 213 FTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNW 272
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +K +SW+A++ GY ++G + A+ +M G++ D V + A H LE
Sbjct: 273 MTDKSVISWSAMIKGYVKNGQ-SLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALEN 331
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF--RRMHDRNVISWTTMISMN 235
K +HG S+K+G + S+ L+ TY+KC A ++F ++ D+++I W +MIS +
Sbjct: 332 VKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAH 391
Query: 236 R-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
L+ M+ P+ VTF+GL+ A LV++G+
Sbjct: 392 ANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGK 436
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 8/186 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MYC+ D A IFN + + ++SW+ ++ G+ K S ALS +M G+ D
Sbjct: 254 IDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADF 313
Query: 58 VTYSTALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
V L H G L ++ LH +K GL S + AL+ Y++ G + A+R+F+
Sbjct: 314 VIMINILP-AFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFE 372
Query: 117 E--MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
E + +KD + WN+++S + GD+ + M + D V+F +AC +
Sbjct: 373 EEKIDDKDLIMWNSMISAHANHGDWS-QCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGL 431
Query: 175 LELGKQ 180
+E GK+
Sbjct: 432 VEKGKE 437
>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 579
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 181/571 (31%), Positives = 318/571 (55%), Gaps = 23/571 (4%)
Query: 78 QLHSLIVKFGLDSEVYVGNA-----LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
Q+H+LI+ GL + +A LI Y R ++ AR VF++MP + +WN+++
Sbjct: 3 QIHALILTTGL----FFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIA 58
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Y++ +Y E + M+ +G++ D +FT AC +L++G+ I ++ GYG
Sbjct: 59 YSRT-NYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGF 117
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMR 247
V V + +++ Y+K A VF +M R+V+SWTTMI+ + DA+ +++ M+
Sbjct: 118 DVFVVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQ 177
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
+ + V +GLI A + K G +HG ++ + + LI MYA+ ++
Sbjct: 178 KERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLE 237
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVG 366
+ +VF+ + + +ISW ALISG+AQNG + + + + KP+ + S L+A
Sbjct: 238 LASRVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSA-- 295
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
A+ +LK G+ H HI+K L D + G+AL+DMY K G++ ++ +F++ + + W
Sbjct: 296 CAQVGNLKVGKSLHGHIVK-RLYLDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILW 354
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
A+IS+ HGD ++ F +M+ + PD TF S+L+ C +G++ +G++ F ++
Sbjct: 355 NAMISSYGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLID 414
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGE 546
I+PS HY+CMVD+L R G++EEA +L+ + PGL++ +LL C H N+ +GE
Sbjct: 415 KSKIQPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGE 474
Query: 547 RIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADV-GDI 605
+A +++ P G YVL+SN ++ W+ A+ RK MK+ G+RK G+S +V GD
Sbjct: 475 MVAKKILESNPDDLGIYVLVSNFFSMAKKWDDAAVFRKIMKNTGMRKVPGYSAVEVNGD- 533
Query: 606 DGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
L F D H + ++I ++ + L +EM+
Sbjct: 534 --LQAFLMEDKNHNQYQDILQILDILDNEMR 562
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 182/340 (53%), Gaps = 12/340 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+N+Y KSG+ DKA +F+ + D+VSW T+++GF +S DA+ M D
Sbjct: 126 LNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDG 185
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V + C FGL +H +V+ ++ + + +LI MY++ G+L A RVF+
Sbjct: 186 VVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRVFEG 245
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P K +SW A++SG+ Q+G + + + +L+EM G + D VS S+ SAC NL++
Sbjct: 246 IPYKSVISWGALISGFAQNG-FANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLKV 304
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK +HG +K Y VS G L+ Y+KC A +F ++ R++I W MIS
Sbjct: 305 GKSLHGHIVKRLYLDKVS-GTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYGI 363
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM-IHGLCIKTNFLSEPS 291
+ +A+SLF +M+ + P+ TF L+ A S LV+EG+ H L K+
Sbjct: 364 HGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEK 423
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG 330
C++ + +R ++++ ++ + + + ++ W AL+SG
Sbjct: 424 HYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSG 463
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 214/434 (49%), Gaps = 19/434 (4%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F + I +WN+++ + ++ D+ L+ RM G+ D+ T++ L C
Sbjct: 40 VFEKMPQRSINAWNSMIIAYSRTNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMD 99
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G + + V FG +V+V ++++ +Y++ G++ +A+ VFD+M +D VSW +++G
Sbjct: 100 LDMGEIIWNQAVDFGYGFDVFVVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITG 159
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
+ Q G ++AI M ++ D V AC + + G +HG ++
Sbjct: 160 FAQSGR-PLDAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNM 218
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMR 247
+ L+ Y+K A++VF + ++VISW +IS ++ ++ EM+
Sbjct: 219 DNVLQTSLIDMYAKNGKLELASRVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQ 278
Query: 248 LDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
G P+ V+ I + A + +GNL K G+ +HG +K +L + S LI MYA+ ++
Sbjct: 279 NSGFKPDLVSLISSLSACAQVGNL-KVGKSLHGHIVKRLYLDKVS-GTALIDMYAKCGAL 336
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK--PNAYTFGSVLNA 364
+ +FD++ R++I WNA+IS Y +G + A+ F +KE+ P+ TF S+L+A
Sbjct: 337 TFARALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFLK-MKETNITPDHATFASLLSA 395
Query: 365 VGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
+ + + GQ H I K + + ++D+ + G + E+ ++ K
Sbjct: 396 CSHSGLV--EEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPG 453
Query: 424 FA-WTAIISALARH 436
A W A++S H
Sbjct: 454 LAIWVALLSGCLNH 467
>gi|147791119|emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 197/633 (31%), Positives = 331/633 (52%), Gaps = 52/633 (8%)
Query: 9 QFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCL 68
Q+ K +F DI V +GF + +ALS +++ V+ T+ L
Sbjct: 49 QWRKKTAVFEISMKRDIA--KLVSNGFYR--EALSLYSKLHSSSVLEHKFTFPFLLKASA 104
Query: 69 DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
L G LH+ ++K G ++Y AL MY + L A +VF+EMP+++ S N
Sbjct: 105 KLNSPLQGQILHTQLIKTGFHLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNV 164
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
+SG++++G Y EA+ A ++ R + V+ S AC ++EL Q+H ++IK+
Sbjct: 165 TISGFSRNG-YFREALGAFKQVGLGNFRPNSVTIASVLPACA---SVELDGQVHCLAIKL 220
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LF 243
G + + V +++ YS C A KVF ++ D+NV+S+ IS ++ +F
Sbjct: 221 GVESDIYVATAVVTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVF 280
Query: 244 KEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
K++ G PN VT + ++ A S ++ GR IHGL +K + V L+ MY++
Sbjct: 281 KDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSK 340
Query: 303 FESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
+ +F ELS R +++WN++I+G NG S AV+ F + E +P++ T+ +
Sbjct: 341 CGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNT 400
Query: 361 VLNAVGAAEDI---------------------------------SLKHGQRCHSHIIKVG 387
+++ + +L+ G+ H H I+
Sbjct: 401 MISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTN 460
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA--WTAIISALARHGDYESVMNQ 445
+D+D + +AL+DMY K G + ++RVF + Q K + W A+IS R+G Y+S
Sbjct: 461 IDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEI 520
Query: 446 FKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLG 505
F +M+ + V+P+S T +S+L+VC G I +G LF M +DY + P+ +H+ CMVD+LG
Sbjct: 521 FNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLG 580
Query: 506 RVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVL 565
R GRL+EA+EL+ ++P +SV SLLGACR H + +GE +A L ++EP +V+
Sbjct: 581 RSGRLKEAQELIHEMPEA-SVSVFASLLGACRHHSDSALGEEMAKKLSELEPQDPTPFVI 639
Query: 566 MSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
+SN+YA +G W V +R+ M +G++K G S
Sbjct: 640 LSNIYAVQGRWGDVERVREMMNDRGLKKPPGCS 672
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 146/546 (26%), Positives = 260/546 (47%), Gaps = 65/546 (11%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
+MY K AL +F + + ++ S N +SGF ++ +AL ++ L ++V
Sbjct: 136 DMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSV 195
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T ++ L C E L G Q+H L +K G++S++YV A++TMYS G LV A++VFD++
Sbjct: 196 TIASVLPACASVE--LDG-QVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQI 252
Query: 119 PNKDSVSWNAILSGYTQDGDYGV--EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+K+ VS+NA +SG Q+G + + L+E G + V+ S SAC +
Sbjct: 253 LDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLE--SSGEVPNSVTLVSILSACSKLLYIR 310
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMIS-- 233
G+QIHG+ +K+ VG L+ YSKC A +F + RN+++W +MI+
Sbjct: 311 FGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGM 370
Query: 234 -MNRED--AVSLFKEMRLDGVCPNDVTF-------------------------------- 258
+N + AV LF+++ +G+ P+ T+
Sbjct: 371 MLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASL 430
Query: 259 ---IGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
L+ A S + ++ G+ IHG I+TN ++ + LI MY + + +VF +
Sbjct: 431 KSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQ 490
Query: 316 LSCR--EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
+ + WNA+ISGY +NG +A + F + +E +PN+ T S+L+ +I
Sbjct: 491 FQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEID 550
Query: 373 LKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
G + + + GL+ ++D+ G+ G + E+Q + +E E S + +++
Sbjct: 551 --RGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMPEASVSVFASLLG 608
Query: 432 ALARHGDY---ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
A H D E + + E+E + P + ++ V GR G + + R M+ D
Sbjct: 609 ACRHHSDSALGEEMAKKLSELEPQDPTP-FVILSNIYAVQGRWGDVERVRE----MMNDR 663
Query: 489 HIEPSP 494
++ P
Sbjct: 664 GLKKPP 669
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 161/364 (44%), Gaps = 49/364 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG-FEKSDDALSFALRMNLI---GVVFD 56
+ MY G+ A +F+ + + ++VS+N +SG + L F + +L+ G V +
Sbjct: 233 VTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPN 292
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR------------ 104
+VT + LS C FG Q+H L+VK ++ + VG AL+ MYS+
Sbjct: 293 SVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFI 352
Query: 105 ----------WGRLVE----------ARRVFDEMPNK----DSVSWNAILSGYTQDGDYG 140
W ++ A +F+++ + DS +WN ++SG++Q G
Sbjct: 353 ELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQV- 411
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
VEA +M G+ S TS AC L+ GK+IHG +I+ T + L
Sbjct: 412 VEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTAL 471
Query: 201 MSTYSKCEVTGDANKVFRRMHDR--NVISWTTMIS-----MNREDAVSLFKEMRLDGVCP 253
+ Y KC + A +VF + + + W MIS + A +F +M+ + V P
Sbjct: 472 IDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQP 531
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV-CNCLITMYARFESMQDSEKV 312
N T + ++ S + G + + + L+ S C++ + R +++++++
Sbjct: 532 NSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQEL 591
Query: 313 FDEL 316
E+
Sbjct: 592 IHEM 595
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 186/529 (35%), Positives = 292/529 (55%), Gaps = 24/529 (4%)
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
SWN++++ + GD VEA+ A + + GL SF +C +L G+ H
Sbjct: 1109 SWNSVIADLARGGD-SVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQ 1167
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDA 239
+ G+ T + V + L+ YSKC DA +F + RNV+SWT+MI+ ++A
Sbjct: 1168 AFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNA 1227
Query: 240 VSLFKEMRLD--------GVCPNDVTFIGLIHAIS--IGNLVKEGRMIHGLCIKTNFLSE 289
+ LFK+ + V + V + ++ A S G + EG +HG +K F
Sbjct: 1228 LLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG--VHGFVVKKGFDGS 1285
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V N L+ YA+ S+KVFD + ++ ISWN++I+ YAQ+GLS A++ F G+++
Sbjct: 1286 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 1345
Query: 350 ES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ NA T +VL A A +L+ G+ H +IK+ L+ + VG++++DMY K G
Sbjct: 1346 HVGVRYNAVTLSAVLLACAHAG--ALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 1403
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +++ F+ +EK+ +WTA+++ HG + ++ F +M GV+P+ ITF+SVL
Sbjct: 1404 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 1463
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ +G H F++M Y IEP +HY CMVD+ GR G L EA L+ ++ P
Sbjct: 1464 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 1523
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V SLLGACRIH NV++GE A L +++P G YVL+SNLYA+ G W V +R MK
Sbjct: 1524 VWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMK 1583
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++ + K GFS ++ +H F GD HP E IY+ E L E++
Sbjct: 1584 NRQLVKPPGFSLVELK--GRVHVFLVGDKEHPHHEMIYKYLEKLTLELQ 1630
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 226/451 (50%), Gaps = 29/451 (6%)
Query: 13 ALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFDAVTYSTALSFCL 68
A + ++ ++ SWN+V++ + D++ ALR + +G++ ++ + C
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVE-ALRAFSSLRKLGLIPTRSSFPCTIKSCS 1153
Query: 69 DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
+ G H FG +++++V +ALI MYS+ G+L +AR +FDE+P ++ VSW +
Sbjct: 1154 ALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTS 1213
Query: 129 ILSGYTQDGDYGVEAILALIEMMRK--------GLRLDHVSFTSAASACGHEKNLELGKQ 180
+++GY Q+ + A+L + + + + LD V S SAC + +
Sbjct: 1214 MITGYVQN-EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 1272
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE--- 237
+HG +K G+ + VGN LM Y+KC + KVF M +++ ISW +MI++ +
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 1332
Query: 238 --DAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+ +F M R GV N VT ++ A + ++ G+ IH IK + V
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 1392
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
+I MY + ++ ++K FD + + + SW A+++GY +G + A+ F+ +++ KP
Sbjct: 1393 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 1452
Query: 354 NAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
N TF SVL A G E+ H + I+ G++ ++D++G+ G + E
Sbjct: 1453 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLNE 1508
Query: 411 SQRVFNETQEKSEF-AWTAIISALARHGDYE 440
+ + + K +F W +++ A H + +
Sbjct: 1509 AYNLIKRMKMKPDFVVWGSLLGACRIHKNVD 1539
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 185/394 (46%), Gaps = 42/394 (10%)
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
KN + +QIH I+ G + L+ YS A +F ++ + +W +I
Sbjct: 38 KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLII 97
Query: 233 SMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
N E A+ L+K M G+ + TF +I A + + G+++HG IK F
Sbjct: 98 RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS 157
Query: 288 SEPSVCNCLITMYAR----------FESM---------------------QDSEKVFDEL 316
+ V N LI Y + FE M Q++ ++FDE+
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI 217
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKH 375
+ ++SW A+I+GY +N A++ F + E+ PN YT S++ A ++L
Sbjct: 218 PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL-- 275
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G+ H + IK ++ +G+AL+DMY K GSI ++ VF KS W ++I++L
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
HG + +N F EME V+PD+ITF+ VL C + +G F M + Y I P P+
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395
Query: 496 HYSCMVDMLGRVGRLEEA---EELVGQIPGGPGL 526
HY CM ++ R L+EA + VG + P +
Sbjct: 396 HYECMTELYARSNNLDEAFKSTKEVGSLANSPSI 429
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 179/348 (51%), Gaps = 22/348 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDAL----SFALRMNLI-- 51
++MY K GQ A +F+ + ++VSW ++++G+ E++D+AL F +
Sbjct: 1184 IDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVED 1243
Query: 52 --GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
V D+V + LS C G +H +VK G D + VGN L+ Y++ G+ +
Sbjct: 1244 GNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPL 1303
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASA 168
+++VFD M KD +SWN++++ Y Q G G EA+ M+R G+R + V+ ++ A
Sbjct: 1304 VSKKVFDWMEEKDDISWNSMIAVYAQSGLSG-EALEVFHGMVRHVGVRYNAVTLSAVLLA 1362
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C H L GK IH IKM +V VG ++ Y KC A K F RM ++NV SW
Sbjct: 1363 CAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSW 1422
Query: 229 TTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
T M++ ++A+ +F +M GV PN +TF+ ++ A S LV+EG +K
Sbjct: 1423 TAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFN-AMK 1481
Query: 284 TNFLSEPSV--CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALI 328
+ EP + C++ ++ R + ++ + + + + + W +L+
Sbjct: 1482 HKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 1529
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 190/396 (47%), Gaps = 44/396 (11%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ I++ GL ++ + LI +YS GR+ A +F ++ N + +WN I+ T +G
Sbjct: 45 QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+A++ M+ +G+ D +F AC + +++LGK +HG IK G+ V V
Sbjct: 105 -LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS------------------------ 233
N L+ Y KC T A KVF +M RNV+SWTT+IS
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 234 ------------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
E+A+ LFK M+ + + PN+ T + LI A + ++ GR IH
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IK + LI MY++ S++D+ +VF+ + + + +WN++I+ +GL A+
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343
Query: 342 QAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALL 399
F + + + KP+A TF VL A +++ K G + + + G+ P +
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNV--KEGCAYFTRMTQHYGIAPIPEHYECMT 401
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
++Y + ++ E+ F T+E A + I AR
Sbjct: 402 ELYARSNNLDEA---FKSTKEVGSLANSPSICFDAR 434
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 155/360 (43%), Gaps = 49/360 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+++Y G+ A+ +F + NP +WN ++ S+ AL M G+ D
Sbjct: 66 IHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADK 125
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + C + G +H ++K+G +V+V N LI Y + G A +VF++
Sbjct: 126 FTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEK 185
Query: 118 MPNKDSVSWNAILSGYTQDGDY------------------------------GVEAILAL 147
M ++ VSW ++SG GD EA+
Sbjct: 186 MRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELF 245
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
M + + + + S AC L LG+ IH +IK V +G L+ YSKC
Sbjct: 246 KRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC 305
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLI 262
DA +VF M +++ +W +MI+ ++A++LF EM V P+ +TFIG++
Sbjct: 306 GSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365
Query: 263 HA-ISIGNLVKEG-----RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
A + I N VKEG RM I P C+ +YAR ++ ++ K E+
Sbjct: 366 CACVHIKN-VKEGCAYFTRMTQHYGIA----PIPEHYECMTELYARSNNLDEAFKSTKEV 420
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 186/529 (35%), Positives = 292/529 (55%), Gaps = 24/529 (4%)
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
SWN++++ + GD VEA+ A + + GL SF +C +L G+ H
Sbjct: 1982 SWNSVIADLARGGD-SVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQ 2040
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDA 239
+ G+ T + V + L+ YSKC DA +F + RNV+SWT+MI+ ++A
Sbjct: 2041 AFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNA 2100
Query: 240 VSLFKEMRLD--------GVCPNDVTFIGLIHAIS--IGNLVKEGRMIHGLCIKTNFLSE 289
+ LFK+ + V + V + ++ A S G + EG +HG +K F
Sbjct: 2101 LLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG--VHGFVVKKGFDGS 2158
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V N L+ YA+ S+KVFD + ++ ISWN++I+ YAQ+GLS A++ F G+++
Sbjct: 2159 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 2218
Query: 350 ES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ NA T +VL A A +L+ G+ H +IK+ L+ + VG++++DMY K G
Sbjct: 2219 HVGVRYNAVTLSAVLLACAHAG--ALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 2276
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ +++ F+ +EK+ +WTA+++ HG + ++ F +M GV+P+ ITF+SVL
Sbjct: 2277 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 2336
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ +G H F++M Y IEP +HY CMVD+ GR G L EA L+ ++ P
Sbjct: 2337 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 2396
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V SLLGACRIH NV++GE A L +++P G YVL+SNLYA+ G W V +R MK
Sbjct: 2397 VWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMK 2456
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++ + K GFS ++ +H F GD HP E IY+ E L E++
Sbjct: 2457 NRQLVKPPGFSLVELK--GRVHVFLVGDKEHPHHEMIYKYLEKLTLELQ 2503
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 225/449 (50%), Gaps = 29/449 (6%)
Query: 13 ALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFDAVTYSTALSFCL 68
A + ++ ++ SWN+V++ + D++ ALR + +G++ ++ + C
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVE-ALRAFSSLRKLGLIPTRSSFPCTIKSCS 2026
Query: 69 DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
+ G H FG +++++V +ALI MYS+ G+L +AR +FDE+P ++ VSW +
Sbjct: 2027 ALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTS 2086
Query: 129 ILSGYTQDGDYGVEAILALIEMMRK--------GLRLDHVSFTSAASACGHEKNLELGKQ 180
+++GY Q+ + A+L + + + + LD V S SAC + +
Sbjct: 2087 MITGYVQN-EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 2145
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE--- 237
+HG +K G+ + VGN LM Y+KC + KVF M +++ ISW +MI++ +
Sbjct: 2146 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 2205
Query: 238 --DAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+A+ +F M R GV N VT ++ A + ++ G+ IH IK + V
Sbjct: 2206 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 2265
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
+I MY + ++ ++K FD + + + SW A+++GY +G + A+ F+ +++ KP
Sbjct: 2266 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 2325
Query: 354 NAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
N TF SVL A G E+ H + I+ G++ ++D++G+ G + E
Sbjct: 2326 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLNE 2381
Query: 411 SQRVFNETQEKSEF-AWTAIISALARHGD 438
+ + + K +F W +++ A H +
Sbjct: 2382 AYNLIKRMKMKPDFVVWGSLLGACRIHKN 2410
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 185/394 (46%), Gaps = 42/394 (10%)
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
KN + +QIH I+ G + L+ YS A +F ++ + +W +I
Sbjct: 38 KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLII 97
Query: 233 SMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
N E A+ L+K M G+ + TF +I A + + G+++HG IK F
Sbjct: 98 RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS 157
Query: 288 SEPSVCNCLITMYAR----------FESM---------------------QDSEKVFDEL 316
+ V N LI Y + FE M Q++ ++FDE+
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI 217
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKH 375
+ ++SW A+I+GY +N A++ F + E+ PN YT S++ A ++L
Sbjct: 218 PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL-- 275
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G+ H + IK ++ +G+AL+DMY K GSI ++ VF KS W ++I++L
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
HG + +N F EME V+PD+ITF+ VL C + +G F M + Y I P P+
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395
Query: 496 HYSCMVDMLGRVGRLEEA---EELVGQIPGGPGL 526
HY CM ++ R L+EA + VG + P +
Sbjct: 396 HYECMTELYARSNNLDEAFKSTKEVGSLANSPSI 429
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 180/348 (51%), Gaps = 22/348 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDAL----SFALRMNLI-- 51
++MY K GQ A +F+ + ++VSW ++++G+ E++D+AL F +
Sbjct: 2057 IDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVED 2116
Query: 52 --GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
V D+V + LS C G +H +VK G D + VGN L+ Y++ G+ +
Sbjct: 2117 GNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPL 2176
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASA 168
+++VFD M KD +SWN++++ Y Q G G EA+ M+R G+R + V+ ++ A
Sbjct: 2177 VSKKVFDWMEEKDDISWNSMIAVYAQSGLSG-EALEVFHGMVRHVGVRYNAVTLSAVLLA 2235
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C H L GK IH IKM +V VG ++ Y KC A K F RM ++NV SW
Sbjct: 2236 CAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSW 2295
Query: 229 TTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
T M++ ++A+ +F +M GV PN +TF+ ++ A S LV+EG +K
Sbjct: 2296 TAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFN-AMK 2354
Query: 284 TNFLSEPSVCN--CLITMYARFESMQDSEKVFDELSCR-EIISWNALI 328
+ EP + + C++ ++ R + ++ + + + + + W +L+
Sbjct: 2355 HKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 2402
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 190/396 (47%), Gaps = 44/396 (11%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ I++ GL ++ + LI +YS GR+ A +F ++ N + +WN I+ T +G
Sbjct: 45 QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+A++ M+ +G+ D +F AC + +++LGK +HG IK G+ V V
Sbjct: 105 -LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS------------------------ 233
N L+ Y KC T A KVF +M RNV+SWTT+IS
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 234 ------------MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
E+A+ LFK M+ + + PN+ T + LI A + ++ GR IH
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
IK + LI MY++ S++D+ +VF+ + + + +WN++I+ +GL A+
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343
Query: 342 QAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALL 399
F + + + KP+A TF VL A +++ K G + + + G+ P +
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNV--KEGCAYFTRMTQHYGIAPIPEHYECMT 401
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
++Y + ++ E+ F T+E A + I AR
Sbjct: 402 ELYARSNNLDEA---FKSTKEVGSLANSPSICFDAR 434
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 155/360 (43%), Gaps = 49/360 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+++Y G+ A+ +F + NP +WN ++ S+ AL M G+ D
Sbjct: 66 IHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADK 125
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + C + G +H ++K+G +V+V N LI Y + G A +VF++
Sbjct: 126 FTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEK 185
Query: 118 MPNKDSVSWNAILSGYTQDGDY------------------------------GVEAILAL 147
M ++ VSW ++SG GD EA+
Sbjct: 186 MRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELF 245
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
M + + + + S AC L LG+ IH +IK V +G L+ YSKC
Sbjct: 246 KRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC 305
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLI 262
DA +VF M +++ +W +MI+ ++A++LF EM V P+ +TFIG++
Sbjct: 306 GSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365
Query: 263 HA-ISIGNLVKEG-----RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
A + I N VKEG RM I P C+ +YAR ++ ++ K E+
Sbjct: 366 CACVHIKN-VKEGCAYFTRMTQHYGIA----PIPEHYECMTELYARSNNLDEAFKSTKEV 420
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 192/619 (31%), Positives = 327/619 (52%), Gaps = 48/619 (7%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD-- 116
++ L C+ H G LH+L +K + + Y+ N + +YS+ RL ARRVFD
Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 117 -----------------------------EMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
EMP DSVS+N +++ Y + GD A
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQ-PAFQLF 128
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
+EM L +D + + +ACG N+ L +Q+H +S+ G ++VSVGN L+++YSK
Sbjct: 129 LEMREAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKN 186
Query: 208 EVTGDANKVFRRM-HDRNVISWTTMIS---MNRE--DAVSLFKEMRLDGVCPNDVTFIGL 261
+A ++F + DR+ +SW +M+ +RE A+ L+ EM + G+ + T +
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE-SMQDSEKVFDELSCRE 320
+ A + + G H IK+ + V + LI +Y++ M D KVFDE+S +
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPD 306
Query: 321 IISWNALISGYA-QNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQR 378
++ WN +ISGY+ LS A++ F + +P+ + V++A S G++
Sbjct: 307 LVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPS--QGRQ 364
Query: 379 CHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
H +K+ + S+ I V +AL+ MY K G++ +++ +F+ E + ++ ++I+ A+HG
Sbjct: 365 VHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHG 424
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
++ F+ M P +ITF+SVL C G + G+ F+ M + + IEP H+
Sbjct: 425 MGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHF 484
Query: 498 SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP 557
SCM+D+LGR G+L EAE L+ IP PG +LLGACRIHGNVE+ + A+ L++++P
Sbjct: 485 SCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDP 544
Query: 558 AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNT 617
+ YV+++N+Y++ G + A +RK M+ +GV+K+ G SW +V +H F + D
Sbjct: 545 LNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVN--RRIHIFVAEDTF 602
Query: 618 HPRSEEIYRMAECLGSEMK 636
HP ++I E + ++K
Sbjct: 603 HPMIKKIQEYLEEMMRKIK 621
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/461 (31%), Positives = 247/461 (53%), Gaps = 32/461 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++ Y K + A +F+ + PD VS+NT+++ + + D A L M + D
Sbjct: 81 ISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDG 140
Query: 58 VTYSTALSFCLDHEGFLFGL--QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
T S ++ C G GL QLH+L V GLDS V VGNALIT YS+ G L EARR+F
Sbjct: 141 FTLSGIITAC----GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIF 196
Query: 116 DEMP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
+ ++D VSWN+++ Y Q + G +A+ +EM +GL +D + S +A + ++
Sbjct: 197 HWLSEDRDEVSWNSMVVAYMQHRE-GSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQD 255
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC-EVTGDANKVFRRMHDRNVISWTTMIS 233
L G Q H IK GY + VG+ L+ YSKC D KVF + + +++ W TMIS
Sbjct: 256 LLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMIS 315
Query: 234 MN------REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
++A+ F++++ G P+D + + +I A S + +GR +HGL +K +
Sbjct: 316 GYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIP 375
Query: 288 SEP-SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S SV N LI MY++ +++D++ +FD + +S+N++I+GYAQ+G+ ++ F
Sbjct: 376 SNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQR 435
Query: 347 VIK-ESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLD 400
+++ + P TF SVL A G ED + + +++K +P G S ++D
Sbjct: 436 MLEMDFTPTNITFISVLAACAHTGRVED------GKIYFNMMKQKFGIEPEAGHFSCMID 489
Query: 401 MYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ G+ G + E++R+ + F W+A++ A HG+ E
Sbjct: 490 LLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVE 530
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 202/650 (31%), Positives = 328/650 (50%), Gaps = 57/650 (8%)
Query: 29 NTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGL 88
N + F+ A S L ++ IG + A T+ +LS G QLH+ ++ GL
Sbjct: 62 NAFKTFFQIQHHAASSHLLLHPIGSLLLACTHFKSLSQ---------GKQLHAQVISLGL 112
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
D + + L+ Y+ LV+A+ V + D + WN ++S Y ++G + VEA+
Sbjct: 113 DQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLDPLHWNLLISAYVRNG-FFVEALCVYK 171
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
M+ K + D ++ S ACG + G ++H + V N L+S Y +
Sbjct: 172 NMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFG 231
Query: 209 VTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGV------------ 251
A +F M R+ +SW T+IS ++A LF M+ +GV
Sbjct: 232 KLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAG 291
Query: 252 -CPNDVTFIGLIHAIS----------------------IGNLVKEGRMIHGLCIKTNFLS 288
C + F G + IS IG +K G+ IHG ++T F
Sbjct: 292 GCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSHIGA-IKLGKEIHGHAVRTCFDV 350
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+V N LITMY+R + + +F + +I+WNA++SGYA F ++
Sbjct: 351 FDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREML 410
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRG 406
+E +PN T SVL A +L+HG+ H +I+K + ++ +AL+DMY + G
Sbjct: 411 QEGMEPNYVTIASVLPL--CARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSG 468
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ E+++VF+ ++ E +T++I G+ E+ + F+EM ++PD +T ++VLT
Sbjct: 469 RVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLT 528
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G++ +G+ LF M+ + I P +HY+CM D+ GR G L +A+E + +P P
Sbjct: 529 ACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTS 588
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
++ +LLGACRIHGN EMGE A L++M+P SG YVL++N+YA G W +A +R M
Sbjct: 589 AMWATLLGACRIHGNTEMGEWAAGKLLEMKPDHSGYYVLIANMYAAAGSWRKLAEVRTYM 648
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++ GVRK G +W DVG F GD+++P + EIY + + L MK
Sbjct: 649 RNLGVRKAPGCAWVDVG--SEFSPFLVGDSSNPHASEIYPLMDGLNELMK 696
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 239/503 (47%), Gaps = 51/503 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+N Y A + + N D + WN ++S + ++ +AL M + D
Sbjct: 123 VNFYTNVNLLVDAQFVTESSNTLDPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDE 182
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY + L C + F GL++H I ++ ++V NAL++MY R+G+L AR +FD
Sbjct: 183 YTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDN 242
Query: 118 MPNKDSVSWNAILSGYTQDGDY-------------GVE--------------------AI 144
MP +DSVSWN I+S Y G + GVE
Sbjct: 243 MPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGA 302
Query: 145 LALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTY 204
L LI MR + LD ++ +AC H ++LGK+IHG +++ + +V N L++ Y
Sbjct: 303 LQLISQMRTSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMY 362
Query: 205 SKCEVTGDANKVFRRMHDRNVISWTTMIS----MNR-EDAVSLFKEMRLDGVCPNDVTFI 259
S+C G A +F R ++ +I+W M+S M+R E+ LF+EM +G+ PN VT
Sbjct: 363 SRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIA 422
Query: 260 GLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEPSVC-NCLITMYARFESMQDSEKVFDELS 317
++ + I NL + G+ H +K E + N L+ MY+R + ++ KVFD L+
Sbjct: 423 SVLPLCARIANL-QHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLT 481
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHG 376
R+ +++ ++I GY G ++ F + K E KP+ T +VL A + ++ G
Sbjct: 482 KRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVA--QG 539
Query: 377 QRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALA 434
Q +I V G+ + + D++G+ G + +++ K A W ++ A
Sbjct: 540 QVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATLLGACR 599
Query: 435 RHGDYESVMNQFKEMENKGVRPD 457
HG+ E M ++ + ++PD
Sbjct: 600 IHGNTE--MGEWAAGKLLEMKPD 620
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 187/568 (32%), Positives = 297/568 (52%), Gaps = 80/568 (14%)
Query: 142 EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG----YGTHVSVG 197
EA+ +L + R+GLRLD + S C + L GK++H + +K+ GT +S
Sbjct: 42 EAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVH-LHLKLTGLKRPGTFLS-- 98
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----------------MNREDAV 240
N L++ Y+KC +A KVF +M RN+ SW M+S M +D V
Sbjct: 99 NHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVV 158
Query: 241 S-------------------LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
S + E R G+ N +F G++ V R +HG
Sbjct: 159 SWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQI 218
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI-------------------- 321
+ FLS + + ++ Y + M D+ K+FDE+S R++
Sbjct: 219 LVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSAN 278
Query: 322 -----------ISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAE 369
+SW ALISGYA+NG+ A++ F + + +P+ +TF S L A A
Sbjct: 279 ELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCA--CAS 336
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA-WTA 428
SLKHG++ H++++++ + IV SAL+DMY K GS+ ++VF+ K + W
Sbjct: 337 IASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNT 396
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
IISALA+HG E + +M G +PD ITF+ +L C +G++ +G + F+SM DY
Sbjct: 397 IISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDY 456
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
I PS +HY+C++D+LGR G EE + + ++P P V +LLG CRIHG++E+G +
Sbjct: 457 GIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKA 516
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL 608
A+ L+++EP S +YVL+S++YA G WE V +R+ M + V+KE SW ++ + +
Sbjct: 517 AERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIE--NKV 574
Query: 609 HGFSSGDNTHPRSEEIYRMAECLGSEMK 636
H FS D++HP E+IY + E L +M+
Sbjct: 575 HSFSVSDSSHPLKEQIYSVLEQLAGQME 602
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 147/564 (26%), Positives = 248/564 (43%), Gaps = 108/564 (19%)
Query: 23 PDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSL 82
P +V L K ++A+S + G+ D+ T ++ L C D G ++H
Sbjct: 25 PCLVEAIVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLH 84
Query: 83 IVKFGLDSE-VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG---- 137
+ GL ++ N LI MY++ G+ VEAR+VFD+M ++ SWN +LSGY + G
Sbjct: 85 LKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKP 144
Query: 138 --------------------------DYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
Y EA+ E + G++ + SF + C
Sbjct: 145 ARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVK 204
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
K + L +Q+HG + G+ ++V + + ++ Y KC + GDA K+F M R+V++WTTM
Sbjct: 205 LKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTM 264
Query: 232 IS-----------------MNREDAVS-------------------LFKEMRLDGVCPND 255
+S M ++ VS LF +M L V P+
Sbjct: 265 VSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQ 324
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
TF + A + +K G+ IH ++ NF V + LI MY++ S+ KVFD
Sbjct: 325 FTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDL 384
Query: 316 LSCR-EIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISL 373
+ + +++ WN +IS AQ+G A+Q +++ +KP+ TF +LNA
Sbjct: 385 MGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACS------- 437
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
HS +++ GL+ FES + S+ + +I L
Sbjct: 438 ------HSGLVQQGLN------------------FFESMSC-DYGIVPSQEHYACLIDLL 472
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP- 492
R G +E VM+Q ++M K PD + ++L VC +G I GR + +++ +EP
Sbjct: 473 GRAGCFEEVMDQLEKMPYK---PDDRVWNALLGVCRIHGHIELGRKAAERLIE---LEPQ 526
Query: 493 SPDHYSCMVDMLGRVGRLEEAEEL 516
S Y + + +GR E +++
Sbjct: 527 SSTAYVLLSSIYAVLGRWESVQKV 550
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 172/370 (46%), Gaps = 49/370 (13%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y K G A +F+ + D+VSWNT++ + D+AL F +G+ + ++
Sbjct: 136 YAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSF 195
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFG-----------LDSEVYVG-------------- 95
+ L+ C+ + Q+H I+ G LD+ V G
Sbjct: 196 AGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSA 255
Query: 96 ------NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
+++ Y++WG + A +F EMP K+ VSW A++SGY ++G G +A+ +
Sbjct: 256 RDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNG-MGHKALELFTK 314
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
MM +R D +F+S AC +L+ GKQIH +++ + + V + L+ YSKC
Sbjct: 315 MMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGS 374
Query: 210 TGDANKVFRRMHDR-NVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIH 263
G KVF M ++ +V+ W T+IS E+A+ + +M G P+ +TF+ +++
Sbjct: 375 LGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILN 434
Query: 264 AISIGNLVKEG-RMIHGLCIKTNFLSEPSVCNCLITMYAR---FESMQDS-EKVFDELSC 318
A S LV++G + + CLI + R FE + D EK+ +
Sbjct: 435 ACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDD 494
Query: 319 REIISWNALI 328
R WNAL+
Sbjct: 495 R---VWNALL 501
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 189/554 (34%), Positives = 284/554 (51%), Gaps = 44/554 (7%)
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A VF + + + WN +L GY D V A+ + M+ GL + +F +C
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSD-PVSALKLYVVMISLGLLPNSYTFPFLLKSCA 77
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS--- 227
K E G+QIHG +K+GY + V L+S Y++ DA+KVF R R+V+S
Sbjct: 78 KSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTA 137
Query: 228 ----------------------------WTTMISMNRE-----DAVSLFKEMRLDGVCPN 254
W MIS E +A+ LFKEM V P+
Sbjct: 138 LITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPD 197
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
+ T + ++ A + V+ GR +H F S + N LI +Y++ ++ + +F+
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISL 373
LSC++++SWN LI GY L A+ F +++ + PN T S+L A I +
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 374 KHGQRCHSHIIKVGLD--SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
G+ H +I K D + P + ++L+DMY K G I + +VFN KS +W A+I
Sbjct: 318 --GRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 375
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A HG + + F M G+ PD ITF+ +L+ C +G + GRH+F SM +DY I
Sbjct: 376 GFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDIT 435
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
P +HY CM+D+LG G +EA+E++ +P P + SLL ACR HGN+E+ E A
Sbjct: 436 PKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARN 495
Query: 552 LMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGF 611
LMK+EP GSYVL+SN+YA G+W+ VA +R + KG++K G S ++ +H F
Sbjct: 496 LMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEID--SEVHEF 553
Query: 612 SSGDNTHPRSEEIY 625
GD HPR+ EIY
Sbjct: 554 IVGDKLHPRNREIY 567
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 236/479 (49%), Gaps = 55/479 (11%)
Query: 10 FDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSF 66
F A+ +F + P+ + WNT+L G+ S D AL + M +G++ ++ T+ L
Sbjct: 16 FPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKS 75
Query: 67 CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD---------- 116
C + F G Q+H ++K G + ++YV +LI+MY++ GRL +A +VFD
Sbjct: 76 CAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSY 135
Query: 117 ---------------------EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
E+P KD VSWNA++SGY + G Y EA+ EMM+ +
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYK-EALELFKEMMKTNV 194
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
R D + + SAC +++ELG+Q+H G+G+++ + N L+ YSKC A
Sbjct: 195 RPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACG 254
Query: 216 VFRRMHDRNVISWTTMIS----MN-REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
+F + ++V+SW T+I MN ++A+ LF+EM G PNDVT + ++ A +
Sbjct: 255 LFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGA 314
Query: 271 VKEGRMIHGLCIK--TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ GR IH K + + PS+ LI MYA+ ++ + +VF+ + + + SWNA+I
Sbjct: 315 IDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 374
Query: 329 SGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
G+A +G + A F + K +P+ TF +L+A + + L HI K
Sbjct: 375 FGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGR------HIFKSM 428
Query: 388 LDSDPIVGS-----ALLDMYGKRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGDYE 440
I ++D+ G G E++ + E W +++ A RHG+ E
Sbjct: 429 TQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLE 487
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 148/284 (52%), Gaps = 11/284 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y SG A +F+ + D+VSWN ++SG+ ++ +AL M V D T
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
T LS C G Q+HS I G S + + NALI +YS+ G++ A +F+ +
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
KD VSWN ++ GYT Y EA+L EM+R G + V+ S AC H +++G+
Sbjct: 262 KDVVSWNTLIGGYTHMNLYK-EALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRW 320
Query: 181 IH-GVSIKMGYGTHV-SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN 235
IH + K+ T+ S+ L+ Y+KC A++VF M +++ SW MI +M+
Sbjct: 321 IHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMH 380
Query: 236 -REDA-VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI 277
R +A LF MR +G+ P+D+TF+GL+ A S + GR I
Sbjct: 381 GRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI 424
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
C+++ F+ + VF + + WN ++ GYA + ++A++ + +I P
Sbjct: 7 CVLS--PHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLP 64
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR-------- 405
N+YTF +L + A+ + + GQ+ H H++K+G + D V ++L+ MY +
Sbjct: 65 NSYTFPFLLKS--CAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHK 122
Query: 406 -----------------------GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
G+I +Q +F+E K +W A+IS A G Y+
Sbjct: 123 VFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEA 182
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
+ FKEM VRPD T ++VL+ C ++ + GR + S + D+ + + ++D
Sbjct: 183 LELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQV-HSWIDDHGFGSNLKIVNALID 241
Query: 503 MLGRVGRLEEA 513
+ + G++E A
Sbjct: 242 LYSKCGQVETA 252
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++Y K GQ + A +F L+ D+VSWNT++ G+ + +AL M G +
Sbjct: 240 IDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 299
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD--SEVYVGNALITMYSRWGRLVEARRVF 115
VT + L C G +H I K D + + +LI MY++ G + A +VF
Sbjct: 300 VTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVF 359
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKN 174
+ M +K SWNA++ G+ G A L MRK G+ D ++F SAC H
Sbjct: 360 NSMLHKSLSSWNAMIFGFAMHGR--ANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGK 417
Query: 175 LELGKQI 181
L+LG+ I
Sbjct: 418 LDLGRHI 424
>gi|224080081|ref|XP_002306009.1| predicted protein [Populus trichocarpa]
gi|222848973|gb|EEE86520.1| predicted protein [Populus trichocarpa]
Length = 870
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 211/695 (30%), Positives = 356/695 (51%), Gaps = 71/695 (10%)
Query: 1 MNMYCKSGQF-DKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
++MY K G A F++++ D+VSWN ++SGF ++ +DA M + +
Sbjct: 172 VSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSSMLKGQIKPN 231
Query: 57 AVTYSTALSFCL---DHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEAR 112
T + L C ++ + FG ++H +++ L ++V+V NAL++ Y R GR+ EA
Sbjct: 232 YTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEEAE 291
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLD-----HVSFTSAAS 167
+F M +D VSWNAI++GY +G++ +E+ + L LD V+
Sbjct: 292 LLFRRMELRDLVSWNAIIAGYASNGEWS-----KALELFHELLTLDMIEPDSVTLLCIIP 346
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTH-VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
AC +NL +GK IHG ++ SVGN L+S Y+KC+ A + F + R++I
Sbjct: 347 ACAQSRNLHVGKMIHGYVLRHPLLCEDTSVGNALVSFYAKCDDIEGAYETFFMISRRDLI 406
Query: 227 SWTTMISMNREDA-----VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM--IHG 279
SW +M+ E + L + M +G P+ VT + ++H N++KE ++ H
Sbjct: 407 SWNSMLDALVESGYNTWFLELLRWMLSEGTTPDSVTILSVVHFCV--NVLKEDKVKEAHS 464
Query: 280 LCIKTNFLS-----EPSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQ 333
I+ L+ EP++ N ++ YA+ +++ + KVF LS R ++++ A+ISGY
Sbjct: 465 YSIRHRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYIN 524
Query: 334 NGLSLAAVQAF---------------------------FGVIKE-----SKPNAYTFGSV 361
GL A F G+ E KP+A T S+
Sbjct: 525 CGLLDEAYITFNRMPSSDLSVWNLMVRLYAENDCSSQALGLFHELQAHGIKPDAVTIMSL 584
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L A AE S++ ++CH + I+ D + AL D+Y K GSI + ++F K
Sbjct: 585 LPA--CAEMASVQLIKQCHGYAIRSCF-GDLHLDGALQDVYAKCGSIGYAFKLFQLIPNK 641
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+TA+I A HG + + F M G++PD + +VL+ C G++ +G ++F
Sbjct: 642 DLIIFTAMIRGYAMHGMGKEALGTFFHMIELGIKPDHVIITTVLSACSHAGLVDEGLNIF 701
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
S+ K + ++ + + YSC+VD+L R GR+++A +V +P ++ +LLGACR H
Sbjct: 702 YSIEKVHGMKLTMEQYSCVVDLLARGGRIDDAFSMVTGMPIEANANIWGTLLGACRTHHE 761
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
VE+G +AD L K+E G+YV++SNLYA W+ V +RK M+++ ++K G SW +
Sbjct: 762 VELGRFVADRLFKIEAENIGNYVVLSNLYAADARWDGVMEIRKLMRTRDLKKPAGCSWIE 821
Query: 602 VGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V + F +GD +HP +IYR+ L ++K
Sbjct: 822 VERRKNV--FVAGDTSHPHRIDIYRILSTLNGQIK 854
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 151/601 (25%), Positives = 275/601 (45%), Gaps = 70/601 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNL---NNPDIVSWNTVLSGFEKSD--DALSFALRMNLIGVVF 55
+NMY K G D++ +F + N+ D + WN +LSG+ S DA + L + G +
Sbjct: 66 LNMYAKCGALDESKKLFGEIGSCNDRDPIFWNILLSGYAGSRVYDAETLRLFREMHGANY 125
Query: 56 ---DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE-A 111
+VT + L C G ++ +K GLD+ GNAL++MY++ G + + A
Sbjct: 126 PKPSSVTAAIVLPVCARLGDVYMGRSVNCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDA 185
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACG 170
FD + KD VSWNAI+SG+ ++ +E L M KG ++ ++ + + C
Sbjct: 186 YAAFDSIDEKDVVSWNAIISGFAENN--LMEDAFRLFSSMLKGQIKPNYTTLANILPVCA 243
Query: 171 HEKN---LELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
GK+IHG ++ V V N L+S Y + +A +FRRM R+++
Sbjct: 244 SFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRRMELRDLV 303
Query: 227 SWTTMI---SMNRE--DAVSLFKE-MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
SW +I + N E A+ LF E + LD + P+ VT + +I A + + G+MIHG
Sbjct: 304 SWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGY 363
Query: 281 CIKTNFLSE-PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
++ L E SV N L++ YA+ + ++ + + F +S R++ISWN+++ ++G +
Sbjct: 364 VLRHPLLCEDTSVGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTW 423
Query: 340 AVQAFFGVIKE-SKPNAYTFGSVLN---AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
++ ++ E + P++ T SV++ V + + H ++ D +P +G
Sbjct: 424 FLELLRWMLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIG 483
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEF------------------------------- 424
+A+LD Y K G+I + +VF E
Sbjct: 484 NAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRMPSSDL 543
Query: 425 -AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR----H 479
W ++ A + + F E++ G++PD++T +S+L C + + +
Sbjct: 544 SVWNLMVRLYAENDCSSQALGLFHELQAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGY 603
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIH 539
S D H++ + + D+ + G + A +L IP L + +++ +H
Sbjct: 604 AIRSCFGDLHLDGA------LQDVYAKCGSIGYAFKLFQLIP-NKDLIIFTAMIRGYAMH 656
Query: 540 G 540
G
Sbjct: 657 G 657
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/566 (25%), Positives = 259/566 (45%), Gaps = 38/566 (6%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D ++ L C +G LH IV+ G S V AL+ MY++ G L E++++F
Sbjct: 23 DYQAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESKKLF 82
Query: 116 DEM---PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAA---SAC 169
E+ ++D + WN +LSGY Y E + EM G S +AA C
Sbjct: 83 GEIGSCNDRDPIFWNILLSGYAGSRVYDAETLRLFREM--HGANYPKPSSVTAAIVLPVC 140
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE-VTGDANKVFRRMHDRNVISW 228
++ +G+ ++ +IK G TH GN L+S Y+KC V DA F + +++V+SW
Sbjct: 141 ARLGDVYMGRSVNCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSIDEKDVVSW 200
Query: 229 TTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKE--GRMIHGL 280
+IS EDA LF M + PN T ++ S + G+ IHG
Sbjct: 201 NAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLANILPVCASFDEYIAYWFGKEIHGY 260
Query: 281 CIKTN-FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
++ N L++ V N L++ Y R ++++E +F + R+++SWNA+I+GYA NG
Sbjct: 261 VLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIAGYASNGEWSK 320
Query: 340 AVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGS 396
A++ F ++ +P++ T ++ A A+ +L G+ H ++++ L D VG+
Sbjct: 321 ALELFHELLTLDMIEPDSVTLLCIIPA--CAQSRNLHVGKMIHGYVLRHPLLCEDTSVGN 378
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
AL+ Y K I + F + +W +++ AL G + + M ++G P
Sbjct: 379 ALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWMLSEGTTP 438
Query: 457 DSITFLSVLTVC--------GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG 508
DS+T LSV+ C + + RH + + +EP+ + ++D + G
Sbjct: 439 DSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRL--LASKFDVEPTIG--NAILDAYAKCG 494
Query: 509 RLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSN 568
+E A ++ + L ++++ + N + + +M + + LM
Sbjct: 495 NIEYASKVFQSLSENRNLVTFKAIISG---YINCGLLDEAYITFNRMPSSDLSVWNLMVR 551
Query: 569 LYAEKGDWEMVAILRKGMKSKGVRKE 594
LYAE L +++ G++ +
Sbjct: 552 LYAENDCSSQALGLFHELQAHGIKPD 577
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 181/347 (52%), Gaps = 15/347 (4%)
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
R D+ + S +C ++ G+ +HG +++G+ + +V L++ Y+KC ++
Sbjct: 20 FRQDYQAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESK 79
Query: 215 KVFRRM---HDRNVISWTTMIS------MNREDAVSLFKEMR-LDGVCPNDVTFIGLIHA 264
K+F + +DR+ I W ++S + + + LF+EM + P+ VT ++
Sbjct: 80 KLFGEIGSCNDRDPIFWNILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLPV 139
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM-QDSEKVFDELSCREIIS 323
+ V GR ++ IK+ + N L++MYA+ + QD+ FD + ++++S
Sbjct: 140 CARLGDVYMGRSVNCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSIDEKDVVS 199
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAED-ISLKHGQRCHS 381
WNA+ISG+A+N L A + F ++K + KPN T ++L + ++ I+ G+ H
Sbjct: 200 WNAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLANILPVCASFDEYIAYWFGKEIHG 259
Query: 382 HIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
++++ L +D V +AL+ Y + G + E++ +F + + +W AII+ A +G++
Sbjct: 260 YVLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIAGYASNGEWS 319
Query: 441 SVMNQFKEMEN-KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ F E+ + PDS+T L ++ C ++ +H G+ + +L+
Sbjct: 320 KALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLR 366
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 194/637 (30%), Positives = 331/637 (51%), Gaps = 32/637 (5%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFE------KSDDALSFALRMNLIGVVFDAVTYS 61
G+ A +F + D VSWN ++S + KS S R L+ DA T
Sbjct: 194 GRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLR--HDATTLC 251
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
+ +S C + +G +HSL ++ GL S + V NAL+ MYS G+L +A +F M +
Sbjct: 252 SLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRR 311
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
D +SWN ++S Y Q+G+ ++A+ L +++ D ++F+SA AC L G+ +
Sbjct: 312 DLISWNTMISSYVQNGN-NMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMV 370
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NR 236
H +++++ ++ VGN L++ Y KC DA ++F+ M + +V+S +I +
Sbjct: 371 HAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDG 430
Query: 237 EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGN-LVKEGRMIHGLCIKTNFLSEPSVCNC 295
A+ +F MR V N +T + ++ + + N L G +H I FLS+ V N
Sbjct: 431 TKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNS 490
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNA 355
LITMYA+ ++ S VF + R ++SWNA+I+ Q+G +++ F + +
Sbjct: 491 LITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHD----- 545
Query: 356 YTFGSVLNAVGAAEDISLKH-------GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
G+ L+ + AE +S G + H +K GL +D V +A +DMYGK G +
Sbjct: 546 ---GNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKM 602
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
E ++ + + + W +IS AR+G ++ FK M + G PD +TF+++L+ C
Sbjct: 603 DEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSAC 662
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ KG ++SM + + P H C+VD+LGR+GR EAE+ + +P P +
Sbjct: 663 SHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLI 722
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+SLL + R H N+++G + A L++++P +YVL+SNLYA W V +R MK+
Sbjct: 723 WRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKT 782
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+ K SW + + F GD++H +++IY
Sbjct: 783 INLNKIPACSW--LKQKKEVSTFGIGDHSHKHADKIY 817
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 258/527 (48%), Gaps = 23/527 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y A +F + ++VSW ++ + ++AL + RM + +A
Sbjct: 86 LHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNA 145
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++T +S C E + GLQ+ S ++ GL +V V N+LI+M GR+ +A ++F
Sbjct: 146 NAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYR 205
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLE 176
M +D+VSWNA++S Y+ +G ++ +M R G LR D + S S C +
Sbjct: 206 MEERDTVSWNALVSMYSHEG-LCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVS 264
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
G +H + ++ G +++ V N L++ YS DA +F M R++ISW TMIS
Sbjct: 265 YGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYV 324
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N DA+ ++ P+ +TF + A S + +GRM+H + ++ +
Sbjct: 325 QNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLL 384
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
V N LITMY + S++D+E++F + +++S N LI YA A+Q FF + + E
Sbjct: 385 VGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGE 444
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
K N T ++L + ++ D+ +G H++ I G SD V ++L+ MY K G +
Sbjct: 445 VKLNYITIVNILGSFTSSNDLR-NYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLES 503
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S VF +S +W A+I+A +HG E + F +M + G D I ++
Sbjct: 504 SNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSAS 563
Query: 471 NGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEE 512
+ +G L LK D H+ + +DM G+ G+++E
Sbjct: 564 LASLEEGMQLHGLGLKCGLGNDSHV------VNAAMDMYGKCGKMDE 604
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 265/549 (48%), Gaps = 24/549 (4%)
Query: 27 SWNTVLSGFEKS-DDALSFALR--MNLIGVVFDAVTYSTALSFCLD-HEGFLFGLQLHSL 82
SW T +SG + D+ +F++ M GV ++ ++ C EG G +H+L
Sbjct: 10 SWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHAL 69
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVE 142
K GL VY+G AL+ +Y +++A+R+F EMP ++ VSW A++ + +G E
Sbjct: 70 TQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLE-E 128
Query: 143 AILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMS 202
A+ M R+ + + +F + S CG ++ G Q+ I G VSV N L+S
Sbjct: 129 ALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLIS 188
Query: 203 TYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFKEMRLDGVCPND-V 256
DA K+F RM +R+ +SW ++SM + + +F +MR G+ +D
Sbjct: 189 MLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDAT 248
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T LI + + V G +H LC++T S V N L+ MY+ + D+E +F +
Sbjct: 249 TLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNM 308
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKH 375
S R++ISWN +IS Y QNG ++ A++ ++ ++ P+ TF S L A + +L
Sbjct: 309 SRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPG--ALMD 366
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G+ H+ +++ L + +VG++L+ MYGK SI +++R+F + +I + A
Sbjct: 367 GRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAV 426
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVL-TVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
D M F M V+ + IT +++L + N + + G L + H
Sbjct: 427 LEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTI---HAGFLS 483
Query: 495 DHY--SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
D Y + ++ M + G LE + + +I +S +++ A HG+ GE
Sbjct: 484 DDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVS-WNAMIAANVQHGH---GEESLKLF 539
Query: 553 MKMEPAGSG 561
M M G+G
Sbjct: 540 MDMRHDGNG 548
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 176/500 (35%), Positives = 283/500 (56%), Gaps = 14/500 (2%)
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
AL+ M +GL + + + + C ++ + G+++H IK Y V + L+ Y
Sbjct: 45 ALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYV 104
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIG 260
KC+ DA VF M +RNV+SWT MIS + A+SLF +M G PN+ TF
Sbjct: 105 KCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFAT 164
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
++ + + GR IH IK N+ + V + L+ MYA+ + ++ +F L R+
Sbjct: 165 VLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERD 224
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRC 379
++S A+ISGYAQ GL A++ F + +E + N T+ SVL A+ +L HG++
Sbjct: 225 VVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLA--ALDHGKQV 282
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+H+++ + S ++ ++L+DMY K G++ ++R+F+ E++ +W A++ ++HG+
Sbjct: 283 HNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEG 342
Query: 440 ESVMNQFKEM--ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-DYHIEPSPDH 496
V+ F M ENK V+PDS+T L+VL+ C G+ KG +F M ++P H
Sbjct: 343 REVLELFNLMIDENK-VKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKH 401
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
Y C+VDMLGR GR+E A E V ++P P ++ LLGAC +H N+++GE + L+++E
Sbjct: 402 YGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIE 461
Query: 557 PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDN 616
P +G+YV++SNLYA G WE V LR M K V KE G SW ++ + LH F + D
Sbjct: 462 PENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQV--LHTFHASDC 519
Query: 617 THPRSEEIYRMAECLGSEMK 636
+HPR EE+ + L + K
Sbjct: 520 SHPRREEVSAKVQELSARFK 539
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 215/418 (51%), Gaps = 16/418 (3%)
Query: 46 LRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW 105
L M L G+ + Y+T L+ CL G ++H+ ++K VY+ LI Y +
Sbjct: 47 LHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKC 106
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
L +AR VFD MP ++ VSW A++S Y+Q G Y +A+ ++M+R G + +F +
Sbjct: 107 DSLRDARHVFDVMPERNVVSWTAMISAYSQRG-YASQALSLFVQMLRSGTEPNEFTFATV 165
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
++C LG+QIH IK+ Y HV VG+ L+ Y+K +A +F+ + +R+V
Sbjct: 166 LTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDV 225
Query: 226 ISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+S T +IS E+A+ LF+ ++ +G+ N VT+ ++ A+S + G+ +H
Sbjct: 226 VSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNH 285
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+++ S + N LI MY++ ++ + ++FD L R +ISWNA++ GY+++G
Sbjct: 286 LLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREV 345
Query: 341 VQAFFGVIKES--KPNAYTFGSVLNAV--GAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
++ F +I E+ KP++ T +VL+ G ED + S I V DS
Sbjct: 346 LELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHY--G 403
Query: 397 ALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDY---ESVMNQFKEME 450
++DM G+ G + + + E S W ++ A + H + E V +Q ++E
Sbjct: 404 CVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIE 461
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 155/281 (55%), Gaps = 10/281 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
Y K A +F+ + ++VSW ++S + + + ALS ++M G + T
Sbjct: 102 FYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFT 161
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++T L+ C+ GF+ G Q+HS I+K ++ VYVG++L+ MY++ G++ EAR +F +P
Sbjct: 162 FATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLP 221
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D VS AI+SGY Q G EA+ + R+G++ ++V++TS +A L+ GK
Sbjct: 222 ERDVVSCTAIISGYAQLG-LDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGK 280
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMNR 236
Q+H ++ ++V + N L+ YSKC A ++F +H+R VISW M+ S +
Sbjct: 281 QVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHG 340
Query: 237 E--DAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEG 274
E + + LF M + V P+ VT + ++ S G L +G
Sbjct: 341 EGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKG 381
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 97/176 (55%), Gaps = 7/176 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G+ +A IF L D+VS ++SG+ + ++AL R+ G+ +
Sbjct: 201 LDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNY 260
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VTY++ L+ G Q+H+ +++ + S V + N+LI MYS+ G L ARR+FD
Sbjct: 261 VTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDT 320
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM--RKGLRLDHVSFTSAASACGH 171
+ + +SWNA+L GY++ G+ G E +L L +M ++ D V+ + S C H
Sbjct: 321 LHERTVISWNAMLVGYSKHGE-GRE-VLELFNLMIDENKVKPDSVTVLAVLSGCSH 374
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 126/334 (37%), Gaps = 60/334 (17%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI----GVVFD 56
++MY K G A IF+ L+ ++SWN +L G+ K + NL+ V D
Sbjct: 302 IDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPD 361
Query: 57 AVTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
+VT LS C L+ +G + S + DS+ Y ++ M R GR+ A
Sbjct: 362 SVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHY--GCVVDMLGRAGRVEAAF 419
Query: 113 RVFDEMPNKDSVS-WNAILSGYT---------------------QDGDYGV--------- 141
+MP + S + W +L + G+Y +
Sbjct: 420 EFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAG 479
Query: 142 --EAILALIEMM----------RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
E + +L +M R + LD V T AS C H + E+ ++ +S +
Sbjct: 480 RWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFK 539
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEMRLD 249
+V + ++ +V + + H + +I+ + + K +R+
Sbjct: 540 EAGYVPDLSCVLH-----DVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRIC 594
Query: 250 GVCPNDVTFIGLIHA--ISIGNLVKEGRMIHGLC 281
C N + I+ +S+ + + R++ G C
Sbjct: 595 VDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKC 628
>gi|293331543|ref|NP_001169748.1| uncharacterized protein LOC100383629 [Zea mays]
gi|224031397|gb|ACN34774.1| unknown [Zea mays]
Length = 546
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 188/516 (36%), Positives = 287/516 (55%), Gaps = 23/516 (4%)
Query: 101 MYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL----R 156
MY R G +A RVFDEM +DSVSWN++LS D LAL+ M
Sbjct: 1 MYGRCGCRGDAVRVFDEMALRDSVSWNSLLSASASATD-----ALALLRRMLSAAPGAAA 55
Query: 157 LDHVSFTSAASAC----GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD 212
DH + T+ SAC G + L +HG++ G VSVGN L++ Y +C G
Sbjct: 56 CDHATLTTVLSACARAGGGTGSASL-PAVHGLAASCGLDAEVSVGNALITAYFECSSPGS 114
Query: 213 ANKVFRRMHDRNVISWTTMIS-MNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISI 267
A +VF M DRNVI+WT M+S M R +++SLF++MR V N ++ + A +
Sbjct: 115 AERVFDGMADRNVITWTAMVSGMARAERYSESLSLFRQMR-RAVDANRASYSSSLLACAG 173
Query: 268 GNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNAL 327
+EG+ IHGL +K ++ V + L+ MY++ M+D+ +VF + +S +
Sbjct: 174 SRAAREGQQIHGLAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRSGQDPDEVSLTVI 233
Query: 328 ISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
++G+AQNGL A + F ++ K + +A +VL A GA+ +L G++ H+ IK
Sbjct: 234 LAGFAQNGLEEEAFRLFAEMVGKGIRVDANMVSAVLGAFGASAPFAL--GKQIHALAIKR 291
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
+ V + L++MY K G + ES RVF+ T K+ W +II+A ARHG V F
Sbjct: 292 CFGGNTYVCNGLINMYSKCGELQESIRVFDGTPSKNTVTWNSIIAAYARHGHGWEVFGLF 351
Query: 447 KEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGR 506
+ ME GV+P +TFLS+L C G KG + DSM Y I P +HY+C+VDMLGR
Sbjct: 352 ESMEADGVKPTDVTFLSLLHGCSHVGSPRKGLEILDSMPSKYGIHPKVEHYACVVDMLGR 411
Query: 507 VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLM 566
+L++A+ + P + QSL+GAC H N +GE A+ L+ ++P + +YVL+
Sbjct: 412 ASQLDDAKAFIEDGPFKDSALLWQSLMGACSFHKNSGVGECAAEKLLLLDPDCTAAYVLL 471
Query: 567 SNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADV 602
SN+Y+ +G W+ A + K M+++G+RK+ G SW ++
Sbjct: 472 SNVYSSEGRWDDRARIMKRMRARGLRKDTGKSWIEL 507
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 140/449 (31%), Positives = 217/449 (48%), Gaps = 20/449 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIG---VVFDAVT 59
MY + G A+ +F+ + D VSWN++LS + DAL+ RM D T
Sbjct: 1 MYGRCGCRGDAVRVFDEMALRDSVSWNSLLSASASATDALALLRRMLSAAPGAAACDHAT 60
Query: 60 YSTALSFCLDHEGFLFGLQL---HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T LS C G L H L GLD+EV VGNALIT Y A RVFD
Sbjct: 61 LTTVLSACARAGGGTGSASLPAVHGLAASCGLDAEVSVGNALITAYFECSSPGSAERVFD 120
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M +++ ++W A++SG + Y L+L MR+ + + S++S+ AC +
Sbjct: 121 GMADRNVITWTAMVSGMARAERYSES--LSLFRQMRRAVDANRASYSSSLLACAGSRAAR 178
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---S 233
G+QIHG+++K G T + V + LM YSKC + DA +VFR D + +S T ++ +
Sbjct: 179 EGQQIHGLAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRSGQDPDEVSLTVILAGFA 238
Query: 234 MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N E+A LF EM G+ + ++ A G+ IH L IK F
Sbjct: 239 QNGLEEEAFRLFAEMVGKGIRVDANMVSAVLGAFGASAPFALGKQIHALAIKRCFGGNTY 298
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VCN LI MY++ +Q+S +VFD + ++WN++I+ YA++G F + +
Sbjct: 299 VCNGLINMYSKCGELQESIRVFDGTPSKNTVTWNSIIAAYARHGHGWEVFGLFESMEADG 358
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHG-QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
KP TF S+L+ G + S + G + S K G+ + ++DM G R S
Sbjct: 359 VKPTDVTFLSLLH--GCSHVGSPRKGLEILDSMPSKYGIHPKVEHYACVVDMLG-RASQL 415
Query: 410 ESQRVFNETQ--EKSEFAWTAIISALARH 436
+ + F E + S W +++ A + H
Sbjct: 416 DDAKAFIEDGPFKDSALLWQSLMGACSFH 444
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M+MY K G + AL +F + +PD VS +L+GF ++ ++A M G+ DA
Sbjct: 203 MDMYSKCGLMEDALRVFRSGQDPDEVSLTVILAGFAQNGLEEEAFRLFAEMVGKGIRVDA 262
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S L F G Q+H+L +K YV N LI MYS+ G L E+ RVFD
Sbjct: 263 NMVSAVLGAFGASAPFALGKQIHALAIKRCFGGNTYVCNGLINMYSKCGELQESIRVFDG 322
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
P+K++V+WN+I++ Y + G +G E + L E M G++ V+F S C H +
Sbjct: 323 TPSKNTVTWNSIIAAYARHG-HGWE-VFGLFESMEADGVKPTDVTFLSLLHGCSHVGSPR 380
Query: 177 LGKQIHGVSIKMGYGTHVSV 196
G +I S+ YG H V
Sbjct: 381 KGLEILD-SMPSKYGIHPKV 399
>gi|224079788|ref|XP_002305943.1| predicted protein [Populus trichocarpa]
gi|222848907|gb|EEE86454.1| predicted protein [Populus trichocarpa]
Length = 693
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 195/606 (32%), Positives = 320/606 (52%), Gaps = 26/606 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y K G ++A +F+ + N D+VSW T++S ++ AL + M GV +
Sbjct: 83 IDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQAGKWSQALRIYIDMIKAGVYPNE 142
Query: 58 VTYSTALSFCLDHEGFL---FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
T+ L+ GFL G +H+ ++ FG++ + V AL+ MYS+ R+ +A R+
Sbjct: 143 FTFVKVLAAA----GFLGLKHGKVVHAHLIVFGVELNLVVKTALVHMYSKCQRMDDAVRI 198
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
P D W AILSG Q+ EA++A EM G+ ++ ++ S +AC +
Sbjct: 199 SKLTPESDRFLWTAILSGLAQNLKLR-EAVVAFQEMEASGILSNNFTYLSILNACSLILS 257
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC--EVTGDANKVFRRMHDRNVISWTTMI 232
L+LG+QIH I G + VGN L+ Y KC EV D +VF + +VISWT++I
Sbjct: 258 LDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVE-DGLRVFEGIESPDVISWTSLI 316
Query: 233 SMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ E + + EM G+ PN VT ++ + + +HG IKTN
Sbjct: 317 AGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAKSASQLLKLHGHVIKTNAD 376
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG---LSLAAVQAF 344
+ +V N L+ YA E + D+ + +S R+ +++ L + Q G ++L +
Sbjct: 377 HDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLATRLNQMGHHEMALHVINHM 436
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
F + K + Y+ L+A S++ G + HS+ +K GL S V + L+ YGK
Sbjct: 437 FN--DDIKMDGYSMAGFLSASAGLN--SVETGMQLHSYSVKSGLGSSISVSNGLVSFYGK 492
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G +++R F E +E +W +IS LA +G S ++ F +M GV+PDS+TFL V
Sbjct: 493 CGLTRDAERAFAEIREPDIVSWNGLISVLASYGHISSALSAFDDMRLTGVKPDSVTFLLV 552
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L C G++ G F+SM + + IEP DHY C+ D+LGR GRLEEA E++ +P P
Sbjct: 553 LFTCTHCGLVDMGLEYFNSMKEMHGIEPQLDHYVCLFDLLGRAGRLEEAMEILETMPIRP 612
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
S+ ++LL AC++H V +GE IA +K++P+ ++++NLY G ++ A +R+
Sbjct: 613 NASIYKTLLAACKVHRIVPLGEDIASRGLKLDPSDPAFNLMLANLYDSSGRPDLAATIRR 672
Query: 585 GMKSKG 590
++ KG
Sbjct: 673 SVRDKG 678
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 240/507 (47%), Gaps = 15/507 (2%)
Query: 24 DIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLH 80
D+VSW +LS + EK ++AL M G + T+S+ L C F G +H
Sbjct: 5 DVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDGKCIH 64
Query: 81 SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYG 140
++K G +S +G+ LI +YS++G + EA R+F + N D VSW ++S Q G +
Sbjct: 65 GCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQAGKWS 124
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
+A+ I+M++ G+ + +F +A G L+ GK +H I G ++ V L
Sbjct: 125 -QALRIYIDMIKAGVYPNEFTFVKVLAAAGF-LGLKHGKVVHAHLIVFGVELNLVVKTAL 182
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPND 255
+ YSKC+ DA ++ + + + WT ++S + +AV F+EM G+ N+
Sbjct: 183 VHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGILSNN 242
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF-ESMQDSEKVFD 314
T++ +++A S+ + GR IH I + V N L+ MY + ++D +VF+
Sbjct: 243 FTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGLRVFE 302
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISL 373
+ ++ISW +LI+G +++G + ++ + +PN+ T +L + AA+ S
Sbjct: 303 GIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAKSAS- 361
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
+ H H+IK D D V +AL+D Y + ++ + ++ +T + + L
Sbjct: 362 -QLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLATRL 420
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
+ G +E ++ M N ++ D + L+ + G L +K + S
Sbjct: 421 NQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKS-GLGSS 479
Query: 494 PDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ +V G+ G +AE +I
Sbjct: 480 ISVSNGLVSFYGKCGLTRDAERAFAEI 506
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 187/362 (51%), Gaps = 19/362 (5%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP++D VSW ILS Y + + EA+ EMM G + +F+S AC
Sbjct: 1 MPSRDVVSWTGILSAYVKHEKHE-EALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSD 59
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK IHG IK G+ ++ +G+VL+ YSK +A ++F + + +V+SWTTMIS
Sbjct: 60 GKCIHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQ 119
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
A+ ++ +M GV PN+ TF+ ++ A L K G+++H I V
Sbjct: 120 AGKWSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLGL-KHGKVVHAHLIVFGVELNLVV 178
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGV 347
L+ MY++ + M D+ ++ + W A++SG AQN AV AF G+
Sbjct: 179 KTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGI 238
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK-RG 406
+ N +T+ S+LNA +SL G++ H+ +I GL+ D VG+AL+DMY K
Sbjct: 239 LS----NNFTYLSILNACSLI--LSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSH 292
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ + RVF + +WT++I+ L+ HG ++ + + EM G++P+S+T +L
Sbjct: 293 EVEDGLRVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILR 352
Query: 467 VC 468
C
Sbjct: 353 SC 354
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 220 MHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
M R+V+SWT ++S E+A+ +F+EM G CPN+ TF ++ A S +G
Sbjct: 1 MPSRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDG 60
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
+ IHG IK F S + + LI +Y+++ S++++ ++F + +++SW +IS Q
Sbjct: 61 KCIHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQA 120
Query: 335 GLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
G A++ + +IK PN +TF VL A G + LKHG+ H+H+I G++ + +
Sbjct: 121 GKWSQALRIYIDMIKAGVYPNEFTFVKVLAAAGF---LGLKHGKVVHAHLIVFGVELNLV 177
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
V +AL+ MY K + ++ R+ T E F WTAI+S LA++ + F+EME G
Sbjct: 178 VKTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASG 237
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHL 480
+ ++ T+LS+L C + GR +
Sbjct: 238 ILSNNFTYLSILNACSLILSLDLGRQI 264
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 129/259 (49%), Gaps = 11/259 (4%)
Query: 316 LSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLK 374
+ R+++SW ++S Y ++ A+ F ++ PN +TF SVL A A + S
Sbjct: 1 MPSRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFS-- 58
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
G+ H +IK G +S+ I+GS L+D+Y K GSI E+ R+F+ + +WT +IS+L
Sbjct: 59 DGKCIHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLV 118
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
+ G + + + +M GV P+ TF+ VL G G+ H + + L + +E +
Sbjct: 119 QAGKWSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLGLKHG--KVVHAHLIVFGVELNL 176
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
+ +V M + R+++A + P L G + N+++ E + A +
Sbjct: 177 VVKTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQ---NLKLREAVV-AFQE 232
Query: 555 MEPAG--SGSYVLMSNLYA 571
ME +G S ++ +S L A
Sbjct: 233 MEASGILSNNFTYLSILNA 251
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 184/560 (32%), Positives = 312/560 (55%), Gaps = 19/560 (3%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
V+V AL+ MY + G + +A+RVFD M ++++VSW A++SGY G EA L +M
Sbjct: 158 VFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYAT-GKCSEEA-FELFRLM 215
Query: 152 RKGLRLDHVSFTSAA--SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
+ L+ F + A SA L +G Q+HG+ +K G VSV N L++ Y+K E
Sbjct: 216 LQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAEC 275
Query: 210 TGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHA 264
A +VF +RN I+W+ MI+ ++ A +F +M G P + TF+G+++A
Sbjct: 276 MDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNA 335
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL-SCREIIS 323
S + G+ H L +K F ++ V + L+ MYA+ + D++ F +L +++
Sbjct: 336 CSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVL 395
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
W A+I+G+ QNG A+ + + K+ P+ T SVL A + L G++ H+
Sbjct: 396 WTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDL--GKQLHAQ 453
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
I+K VG+AL MY K G++ +S VF ++ +W +IIS ++HG
Sbjct: 454 ILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDA 513
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
++ F+EM+ +G PD ITF+++L+ C G++ +G F +M KDY++ P+ DHY+CMVD
Sbjct: 514 LDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVD 573
Query: 503 MLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGS 562
+L R G+L+EA++ + I G + + +LGACR + ++G + LM++ S +
Sbjct: 574 ILSRAGQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSA 633
Query: 563 YVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSE 622
Y+L+SN+YA + W V +R M+ +GV K++G SW ++ + +H F G+ HP +E
Sbjct: 634 YILLSNIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVEL--YNRVHVFVVGEQQHPEAE 691
Query: 623 ----EIYRMAECLGSEMKYL 638
E+ R+A+ + E +L
Sbjct: 692 NINVELIRLAKHMKDEECFL 711
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 202/375 (53%), Gaps = 12/375 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALS-FALRMNLIGVVFD 56
+NMYCK G A +F+ + + + VSW ++SG+ S++A F L + + +
Sbjct: 165 LNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKN 224
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ LS G L G QLH L++K GL V V N+L+TMY++ + A RVF
Sbjct: 225 EFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFG 284
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
++S++W+A+++GY Q+G+ A + ++M G +F +AC L
Sbjct: 285 SSKERNSITWSAMITGYAQNGEANCAARM-FLQMHSSGFTPTEFTFVGVLNACSDMGALV 343
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMISMN 235
+GKQ H + +K+G+ T V V + L+ Y+KC GDA F +++D +V+ WT MI+ +
Sbjct: 344 VGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGH 403
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E+A+ L+ M G+ P+ +T ++ A + + G+ +H +K F
Sbjct: 404 VQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGG 463
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
SV L TMY++ +++DS VF + R++ISWN++IS ++Q+G A+ F + ++
Sbjct: 464 SVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLE 523
Query: 350 ESKPNAYTFGSVLNA 364
+ P+ TF ++L+A
Sbjct: 524 GTAPDHITFINLLSA 538
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 213/431 (49%), Gaps = 27/431 (6%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGR--LVEARRVFDEMPN--KDSVSWNAILS 131
G LH +K G S V N+LIT Y R L A VF ++P +D SWN++L+
Sbjct: 33 GEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLN 92
Query: 132 GYTQDGDYGVEAILALIEMMRKG---LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
++ + V A+ MM L H SF +A +A + G H ++ K+
Sbjct: 93 PLSR--HHPVSALSHFRSMMSSPEAVLPSPH-SFAAAFTAAARVPSASAGAVTHALACKL 149
Query: 189 GY---GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAV 240
+V V L++ Y K DA +VF M RN +SW M+S E+A
Sbjct: 150 PSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAF 209
Query: 241 SLFKEMRLDGVCP---NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
LF+ M CP N+ ++ A+S+ + G +HGL +K + SV N L+
Sbjct: 210 ELFRLMLQK--CPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLV 267
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
TMYA+ E M + +VF R I+W+A+I+GYAQNG + A + F + P +
Sbjct: 268 TMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEF 327
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
TF VLNA ++ +L G++ H ++K+G ++ V SAL+DMY K G I +++ F+
Sbjct: 328 TFVGVLNA--CSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFH 385
Query: 417 ETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ + + WTA+I+ ++G++E + + M+ +G+ P +T SVL C +
Sbjct: 386 QLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALD 445
Query: 476 KGRHLFDSMLK 486
G+ L +LK
Sbjct: 446 LGKQLHAQILK 456
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 93/191 (48%), Gaps = 13/191 (6%)
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES--MQDSEKVFDEL--SCREIISWNAL 327
+ G +HG +K+ S V N LIT Y + + VF ++ + R++ SWN+L
Sbjct: 31 RTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSL 90
Query: 328 ISGYAQNGLSLAAVQAFFGVIKESK---PNAYTFGSVLNA---VGAAEDISLKHGQRCHS 381
++ +++ ++A+ F ++ + P+ ++F + A V +A ++ H C
Sbjct: 91 LNPLSRHH-PVSALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALAC-- 147
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
+ ++ V +ALL+MY K G++ +++RVF+ ++ +W A++S A E
Sbjct: 148 KLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEE 207
Query: 442 VMNQFKEMENK 452
F+ M K
Sbjct: 208 AFELFRLMLQK 218
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAV 58
MY K G + ++ +F + + D++SWN+++S F + DAL M L G D +
Sbjct: 471 TMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHI 530
Query: 59 TYSTALSFC-----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
T+ LS C +D F F ++ + L + ++ + SR G+L EA+
Sbjct: 531 TFINLLSACSHMGLVDRGWFYF----RAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKD 586
Query: 114 VFDEMP-NKDSVSWNAILSG--YTQDGDYGVEAILALIEM 150
D + + + W +L +D D G A L+E+
Sbjct: 587 FIDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMEL 626
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 191/589 (32%), Positives = 297/589 (50%), Gaps = 47/589 (7%)
Query: 79 LHSLIVKFGLDSEVYVGNALI---TMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
+H+ ++K GL + Y + LI + + L A VFD + + + WN + G+
Sbjct: 21 IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHAL 80
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
D V A+ + M+ GL + +F AC K G+QIHG +K+G +
Sbjct: 81 SSD-PVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLY 139
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----------------------- 232
V L++ Y K DA KVF + R+V+S+T +I
Sbjct: 140 VHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKD 199
Query: 233 -------------SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
+ N ++A+ LFKEM V P++ T + ++ A + ++ GR +H
Sbjct: 200 VVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHS 259
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
F S + N LI +Y + ++ + +F+ LS +++ISWN LI GY L
Sbjct: 260 WIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKE 319
Query: 340 AVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK--VGLDSDPIVGS 396
A+ F +++ + PN T S+L A I + G+ H +I K G+ + + +
Sbjct: 320 ALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDI--GRWIHVYIDKRLKGVSNPSSLRT 377
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
+L+DMY K G I +Q+VF+ +S +W A+I A HG + F M G+ P
Sbjct: 378 SLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEP 437
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
D ITF+ +L+ C +GM+ GRH+F SM +DY I P +HY CM+D+LG G +EAEE+
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 497
Query: 517 VGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDW 576
+ + P + SLL AC++HGNVE+GE A L+K+EP SGSYVL+SN+YA G W
Sbjct: 498 INSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRW 557
Query: 577 EMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
VA R + KG++K G S ++ + +H F GD HPR+ EIY
Sbjct: 558 NEVAKRRALLNDKGMKKVPGCSSIEIDSV--VHEFIIGDKLHPRNREIY 604
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 154/527 (29%), Positives = 259/527 (49%), Gaps = 56/527 (10%)
Query: 7 SGQFD---KALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTY 60
S FD A+ +F+++ P+++ WNT+ G S D AL + M +G+V ++ T+
Sbjct: 47 SPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTF 106
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD---- 116
L C + F G Q+H ++K G D ++YV +LI MY + GR +AR+VFD
Sbjct: 107 PFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSH 166
Query: 117 ---------------------------EMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
E+P KD VSWNA++SGY + G+Y EA+ E
Sbjct: 167 RDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYK-EALELFKE 225
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
MM+ ++ D + + SAC ++ELG+Q+H G+G+++ + N L+ Y KC
Sbjct: 226 MMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 285
Query: 210 TGDANKVFRRMHDRNVISWTTMIS----MN-REDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
A+ +F + ++VISW T+I MN ++A+ LF+EM G PN+VT + ++ A
Sbjct: 286 VETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPA 345
Query: 265 ISIGNLVKEGRMIHGLCIKT-NFLSEP-SVCNCLITMYARFESMQDSEKVFDELSCREII 322
+ + GR IH K +S P S+ LI MYA+ ++ +++VFD + R +
Sbjct: 346 CAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405
Query: 323 SWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISL-KHGQRCH 380
SWNA+I G+A +G + A F + K+ +P+ TF +L+A + + L +H R
Sbjct: 406 SWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDY 439
+ K+ + ++D+ G G E++ + N + + W +++ A HG+
Sbjct: 466 TEDYKITPKLEHY--GCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNV 523
Query: 440 ---ESVMNQFKEMENKGVRPDSITFLS-VLTVCGRNGMIHKGRHLFD 482
ES ++E K S LS + GR + K R L +
Sbjct: 524 ELGESFAQNLIKIEPKN--SGSYVLLSNIYATAGRWNEVAKRRALLN 568
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 142/284 (50%), Gaps = 11/284 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y +G A +F+ + D+VSWN ++SG+ ++ +AL M V D T
Sbjct: 179 YASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTM 238
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
T LS C G Q+HS I G S + + NALI +Y + G + A +F+ +
Sbjct: 239 VTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSY 298
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
KD +SWN ++ GYT Y EA+L EM+R G + V+ S AC H +++G+
Sbjct: 299 KDVISWNTLIGGYTHMNLYK-EALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRW 357
Query: 181 IHGVSIK--MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN 235
IH K G S+ L+ Y+KC A +VF M +R++ SW MI +M+
Sbjct: 358 IHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMH 417
Query: 236 --REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI 277
A +F MR DG+ P+D+TF+GL+ A S ++ GR I
Sbjct: 418 GRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHI 461
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 178/387 (45%), Gaps = 47/387 (12%)
Query: 173 KNLELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTG--DANKVFRRMHDRNVISWT 229
K L+ + IH IK G + T+ ++ ++ + G A VF + + N++ W
Sbjct: 13 KTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWN 72
Query: 230 TM-----ISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
TM +S + A+ L+ M G+ PN TF L+ A + +EG+ IHG +K
Sbjct: 73 TMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKL 132
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
+ V LI MY + +D+ KVFD+ S R+++S+ ALI GYA NG +A + F
Sbjct: 133 GCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMF 192
Query: 345 --------------------FGVIKES------------KPNAYTFGSVLNAVGAAEDIS 372
G KE+ KP+ T +VL+A A+ S
Sbjct: 193 DEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSA--CAQSAS 250
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
++ G++ HS I G S+ + +AL+D+Y K G + + +F K +W +I
Sbjct: 251 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGG 310
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR--HLF-DSMLKDYH 489
Y+ + F+EM G P+ +T LS+L C G I GR H++ D LK
Sbjct: 311 YTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVS 370
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEEL 516
PS S ++DM + G +E A+++
Sbjct: 371 -NPSSLRTS-LIDMYAKCGDIEAAQQV 395
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 8/187 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++Y K G+ + A +F L+ D++SWNT++ G+ + +AL M G +
Sbjct: 277 IDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNE 336
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKF--GLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT + L C G +H I K G+ + + +LI MY++ G + A++VF
Sbjct: 337 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVF 396
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKN 174
D M N+ SWNA++ G+ G + MRK G+ D ++F SAC H
Sbjct: 397 DSMLNRSLSSWNAMIFGFAMHGR--ANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGM 454
Query: 175 LELGKQI 181
L+LG+ I
Sbjct: 455 LDLGRHI 461
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 192/663 (28%), Positives = 329/663 (49%), Gaps = 61/663 (9%)
Query: 10 FDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS-FALRMNLI--GVVFDAVTYSTALSF 66
D A +F+ + D VSW+ ++ GF K D ++ F LI G D T +
Sbjct: 129 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRA 188
Query: 67 CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSW 126
C D L LQ+ AL+ MY + + +AR +FD+M +D V+W
Sbjct: 189 CRD----LKNLQM-----------------ALVDMYVKCREIEDARFLFDKMQERDLVTW 227
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSI 186
++ GY + G E+++ +M +G+ D V+ + AC + + I
Sbjct: 228 TVMIGGYAECGKAN-ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQ 286
Query: 187 KMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVS 241
+ + V +G ++ Y+KC A ++F RM ++NVISW+ MI+ A+
Sbjct: 287 RKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 346
Query: 242 LFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
LF+ M G+ P+ +T L++A I+ NL + R +H L V N L+ Y
Sbjct: 347 LFRMMLSSGMLPDKITLASLLYACINCRNLT-QVRQVHAQASVHGMLQNLIVANKLVHFY 405
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFG 359
+ + ++ D+ +FD + R+ +SW+ ++ G+A+ G + F +I+ ++P+ YT
Sbjct: 406 SYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLP 465
Query: 360 SVLNA-------------------------VGAAEDISLKHGQRC-HSHIIKVGLDSDPI 393
NA V A + H R +I + D I
Sbjct: 466 FCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVI 525
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
+G+A++DM+ K G + ++ +F+ +EK+ +W+A+I+A HG ++ F M G
Sbjct: 526 LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSG 585
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+ P+ IT +S+L C G++ +G F M +DY + HY+C+VD+LGR GRL+EA
Sbjct: 586 ILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEA 645
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEK 573
+L+ + + + LGACR H +V + E+ A +L++++P G Y+L+SN+YA
Sbjct: 646 LKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANA 705
Query: 574 GDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGS 633
G WE VA R M + ++K G++W +V + H FS GD THPRS+EIY M + LG+
Sbjct: 706 GRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKS--HQFSVGDTTHPRSKEIYEMLKSLGN 763
Query: 634 EMK 636
+++
Sbjct: 764 KLE 766
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 237/530 (44%), Gaps = 65/530 (12%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ G+ + V N LI YS + L +A +FD M +DSVSW+ ++ G+ + G
Sbjct: 99 QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 158
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
DY + E++R G R D+ + AC KNL++
Sbjct: 159 DY-INCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMA------------------- 198
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVC 252
L+ Y KC DA +F +M +R++++WT MI E +++ LF++MR +GV
Sbjct: 199 --LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 256
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ V + ++ A + + + R+I + F + + +I MYA+ ++ + ++
Sbjct: 257 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 316
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDI 371
FD + + +ISW+A+I+ Y +G A+ F ++ P+ T S+L A +
Sbjct: 317 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRN- 375
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
L ++ H+ G+ + IV + L+ Y ++ ++ +F+ + +W+ ++
Sbjct: 376 -LTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 434
Query: 432 ALARHGDYESVMNQFKE----------------------------MENKGVRPDSITFLS 463
A+ GDY + F+E M +GV PD + ++
Sbjct: 435 GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVT 494
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
V+ C + G +HK R + D ++ + + M+DM + G +E A E+ ++
Sbjct: 495 VVFACAKLGAMHKARTI-DDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 553
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG--SGSYVLMSNLYA 571
+S +++ A HG G + D M +G L+S LYA
Sbjct: 554 NVIS-WSAMIAAYGYHGQ---GRKALDLFPMMLRSGILPNKITLVSLLYA 599
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 218/477 (45%), Gaps = 42/477 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K + + A +F+ + D+V+W ++ G+ K++++L +M GVV D
Sbjct: 200 VDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDK 259
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V T + C + I + +V +G A+I MY++ G + AR +FD
Sbjct: 260 VAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDR 319
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K+ +SW+A+++ Y G G +A+ M+ G+ D ++ S AC + +NL
Sbjct: 320 MEEKNVISWSAMIAAYGYHGQ-GRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQ 378
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
+Q+H + G ++ V N L+ YS DA +F M R+ +SW+ M+
Sbjct: 379 VRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAK 438
Query: 233 ----------------------------SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
N +++ LF +MR +GV P+ V + ++ A
Sbjct: 439 VGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFA 498
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+ + + R I + F + + +I M+A+ ++ + ++FD + + +ISW
Sbjct: 499 CAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISW 558
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
+A+I+ Y +G A+ F +++ PN T S+L A A + + G R S +
Sbjct: 559 SAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV--EEGLRFFSLM 616
Query: 384 IK-VGLDSDPIVGSALLDMYGKRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGD 438
+ + +D + ++D+ G+ G + E+ ++ T EK E W A + A H D
Sbjct: 617 WEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD 673
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 36/321 (11%)
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
RL+ + SA C +NL +Q+H + G ++ V N L+ YS DA
Sbjct: 78 RLNPKFYISALVNC---RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYG 134
Query: 216 VFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGN 269
+F M R+ +SW+ M+ + + F+E+ G P++ T +I A + N
Sbjct: 135 LFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN 194
Query: 270 LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALIS 329
L L+ MY + ++D+ +FD++ R++++W +I
Sbjct: 195 LQMA----------------------LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIG 232
Query: 330 GYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQR-CHSHIIKVG 387
GYA+ G + ++ F + +E P+ +++ V A + H R +I +
Sbjct: 233 GYAECGKANESLVLFEKMREEGVVPDKV---AMVTVVFACAKLGAMHKARIIDDYIQRKK 289
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
D I+G+A++DMY K G + ++ +F+ +EK+ +W+A+I+A HG ++ F+
Sbjct: 290 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 349
Query: 448 EMENKGVRPDSITFLSVLTVC 468
M + G+ PD IT S+L C
Sbjct: 350 MMLSSGMLPDKITLASLLYAC 370
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 31/300 (10%)
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
R +H L V N LI Y+ + ++ D+ +FD + R+ +SW+ ++ G+A+
Sbjct: 98 RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 157
Query: 335 GLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
G + F +I+ ++P+ YT V+ A +++ +
Sbjct: 158 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM-------------------- 197
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG 453
AL+DMY K I +++ +F++ QE+ WT +I A G + F++M +G
Sbjct: 198 ---ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG 254
Query: 454 VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
V PD + ++V+ C + G +HK R + D ++ + + M+DM + G +E A
Sbjct: 255 VVPDKVAMVTVVFACAKLGAMHKAR-IIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESA 313
Query: 514 EELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG--SGSYVLMSNLYA 571
E+ ++ +S +++ A HG G + D M +G L S LYA
Sbjct: 314 REIFDRMEEKNVIS-WSAMIAAYGYHGQ---GRKALDLFRMMLSSGMLPDKITLASLLYA 369
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 192/609 (31%), Positives = 318/609 (52%), Gaps = 17/609 (2%)
Query: 38 SDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNA 97
+ +AL +M G+ + T+ L C +H+ ++K S ++V A
Sbjct: 34 AQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHVLKSCFQSNIFVQTA 93
Query: 98 LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLR 156
+ MY + GRL +A VF EMP +D SWNA+L G+ Q G ++ + L+ MR G+R
Sbjct: 94 TVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSG--FLDRLSCLLRHMRLSGIR 151
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
D V+ + K+L ++ I++G VSV N L++ YSKC A +
Sbjct: 152 PDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETL 211
Query: 217 FRRMHD--RNVISWTTMISM--NRED---AVSLFKEMRLDGVCPNDVTFIGLIHAISIGN 269
F ++ R+V+SW +MI+ N E AV+ +K M G P+ T + L+ +
Sbjct: 212 FDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPK 271
Query: 270 LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALIS 329
+ G ++H +K S+ V N LI MY++ + + +F+ +S + +SW +IS
Sbjct: 272 ALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMIS 331
Query: 330 GYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
YA+ G ++ F ++ + KP+ T ++++ G + +L+ G+ ++ I G
Sbjct: 332 AYAEKGY-MSEAMTLFNAMEAAGEKPDLVTVLALIS--GCGQTGALELGKWIDNYSINNG 388
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
L + +V +AL+DMY K G +++ +F ++ +WT +I+A A +GD + + F
Sbjct: 389 LKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFF 448
Query: 448 EMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
M G++P+ ITFL+VL C G++ +G F+ M + Y I P DHYSCMVD+LGR
Sbjct: 449 MMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRK 508
Query: 508 GRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMS 567
G L EA E++ +P P + +LL AC++HG +EMG+ +++ L ++EP + YV M+
Sbjct: 509 GHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMA 568
Query: 568 NLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
N+YA WE VA +R+ MK VRK G S V + F+ D HP + IY M
Sbjct: 569 NIYASAEMWEGVAAIRRNMKYLQVRKSPGQSIIQVNGKPTI--FTVEDRDHPETLYIYDM 626
Query: 628 AECLGSEMK 636
+ L S K
Sbjct: 627 LDGLTSRSK 635
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 144/472 (30%), Positives = 230/472 (48%), Gaps = 19/472 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD--DALSFALR-MNLIGVVFDA 57
++MY K G+ + A +F + DI SWN +L GF +S D LS LR M L G+ DA
Sbjct: 95 VDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDA 154
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT + L + ++S ++ G+ +V V N LI YS+ G L A +FDE
Sbjct: 155 VTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDE 214
Query: 118 MPN--KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ + + VSWN++++ Y + + V+A+ M+ G D + + S+C K L
Sbjct: 215 INSGLRSVVSWNSMIAAYA-NFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKAL 273
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G +H +K+G + V V N L+ YSKC A +F M D+ +SWT MIS
Sbjct: 274 FHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAY 333
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E +A++LF M G P+ VT + LI ++ G+ I I
Sbjct: 334 AEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNV 393
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
VCN LI MYA+ D++++F ++ R ++SW +I+ A NG A++ FF +++
Sbjct: 394 VVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEM 453
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSI 408
KPN TF +VL A A ++ G C + + K G++ S ++D+ G++G +
Sbjct: 454 GMKPNHITFLAVLQA--CAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHL 511
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGDYE---SVMNQFKEMENKGVRP 456
E+ + E W+A++SA HG E V Q E+E + P
Sbjct: 512 REALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVAVP 563
>gi|225424928|ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera]
gi|296086418|emb|CBI32007.3| unnamed protein product [Vitis vinifera]
Length = 617
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 192/611 (31%), Positives = 324/611 (53%), Gaps = 50/611 (8%)
Query: 31 VLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDS 90
V +GF + +ALS +++ V+ T+ L L G LH+ ++K G
Sbjct: 9 VSNGFYR--EALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHL 66
Query: 91 EVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEM 150
++Y AL MY + L A +VF+EMP+++ S N +SG++++G Y EA+ A ++
Sbjct: 67 DIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNG-YFREALGAFKQV 125
Query: 151 MRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
R + V+ S AC ++EL Q+H ++IK+G + + V +++ YS C
Sbjct: 126 GLGNFRPNSVTIASVLPACA---SVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGEL 182
Query: 211 GDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFKEM-RLDGVCPNDVTFIGLIHA 264
A KVF ++ D+NV+S+ IS ++ +FK++ G PN VT + ++ A
Sbjct: 183 VLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSA 242
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS-CREIIS 323
S ++ GR IHGL +K + V L+ MY++ + +F ELS R +++
Sbjct: 243 CSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVT 302
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI----------- 371
WN++I+G NG S AV+ F + E +P++ T+ ++++ +
Sbjct: 303 WNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQ 362
Query: 372 ----------------------SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+L+ G+ H H I+ +D+D + +AL+DMY K G +
Sbjct: 363 SAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSY 422
Query: 410 ESQRVFNETQEKSEFA--WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
++RVF + Q K + W A+IS R+G Y+S F +M+ + V+P+S T +S+L+V
Sbjct: 423 LARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSV 482
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G I +G LF M +DY + P+ +H+ CMVD+LGR GRL+EA+EL+ ++P +S
Sbjct: 483 CSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMPEA-SVS 541
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V SLLGACR H + +GE +A L ++EP +V++SN+YA +G W V +R+ M
Sbjct: 542 VFASLLGACRHHSDSALGEEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDVERVREMMN 601
Query: 588 SKGVRKEVGFS 598
+G++K G S
Sbjct: 602 DRGLKKPPGCS 612
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 146/546 (26%), Positives = 260/546 (47%), Gaps = 65/546 (11%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
+MY K AL +F + + ++ S N +SGF ++ +AL ++ L ++V
Sbjct: 76 DMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSV 135
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T ++ L C E L G Q+H L +K G++S++YV A++TMYS G LV A++VFD++
Sbjct: 136 TIASVLPACASVE--LDG-QVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQI 192
Query: 119 PNKDSVSWNAILSGYTQDGDYGV--EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+K+ VS+NA +SG Q+G + + L+E G + V+ S SAC +
Sbjct: 193 LDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLE--SSGEVPNSVTLVSILSACSKLLYIR 250
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMIS-- 233
G+QIHG+ +K+ VG L+ YSKC A +F + RN+++W +MI+
Sbjct: 251 FGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGM 310
Query: 234 -MNRED--AVSLFKEMRLDGVCPNDVTF-------------------------------- 258
+N + AV LF+++ +G+ P+ T+
Sbjct: 311 MLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASL 370
Query: 259 ---IGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
L+ A S + ++ G+ IHG I+TN ++ + LI MY + + +VF +
Sbjct: 371 KSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQ 430
Query: 316 LSCR--EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
+ + WNA+ISGY +NG +A + F + +E +PN+ T S+L+ +I
Sbjct: 431 FQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEID 490
Query: 373 LKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
G + + + GL+ ++D+ G+ G + E+Q + +E E S + +++
Sbjct: 491 --RGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMPEASVSVFASLLG 548
Query: 432 ALARHGDY---ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
A H D E + + E+E + P + ++ V GR G + + R M+ D
Sbjct: 549 ACRHHSDSALGEEMAKKLSELEPQDPTP-FVILSNIYAVQGRWGDVERVRE----MMNDR 603
Query: 489 HIEPSP 494
++ P
Sbjct: 604 GLKKPP 609
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 161/364 (44%), Gaps = 49/364 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG-FEKSDDALSFALRMNLI---GVVFD 56
+ MY G+ A +F+ + + ++VS+N +SG + L F + +L+ G V +
Sbjct: 173 VTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPN 232
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR------------ 104
+VT + LS C FG Q+H L+VK ++ + VG AL+ MYS+
Sbjct: 233 SVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFI 292
Query: 105 ----------WGRLVE----------ARRVFDEMPNK----DSVSWNAILSGYTQDGDYG 140
W ++ A +F+++ + DS +WN ++SG++Q G
Sbjct: 293 ELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQV- 351
Query: 141 VEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
VEA +M G+ S TS AC L+ GK+IHG +I+ T + L
Sbjct: 352 VEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTAL 411
Query: 201 MSTYSKCEVTGDANKVFRRMHDR--NVISWTTMIS-----MNREDAVSLFKEMRLDGVCP 253
+ Y KC + A +VF + + + W MIS + A +F +M+ + V P
Sbjct: 412 IDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQP 471
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV-CNCLITMYARFESMQDSEKV 312
N T + ++ S + G + + + L+ S C++ + R +++++++
Sbjct: 472 NSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQEL 531
Query: 313 FDEL 316
E+
Sbjct: 532 IHEM 535
>gi|218190567|gb|EEC72994.1| hypothetical protein OsI_06907 [Oryza sativa Indica Group]
Length = 711
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/652 (28%), Positives = 338/652 (51%), Gaps = 22/652 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+ +Y + Q + + +F + + VSW ++SGF + + L M L +
Sbjct: 55 ITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPND 114
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T++T S C H G +H+L ++ G S V+V NAL++MY++ G + EA+ +F
Sbjct: 115 ITFATLFSVCTKHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGC 174
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD VSWNAI+ G +Q + L EM R+ + D +SF S+C H + +E
Sbjct: 175 IACKDLVSWNAIIFGCSQY-VLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEE 233
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTM----- 231
G+ I+ G + + ++ + + +A + + M N + W ++
Sbjct: 234 GRHCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCR 293
Query: 232 ----ISMNREDAVSLFKEMRLDGVCPNDVTFIGL-IHAISIGNLVKEGRMIHGLCIKTNF 286
IS+ + A K G D + + + + + + +G +HGL +K
Sbjct: 294 VHGNISIGIQAAEHRLKLEPGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGC 353
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S + + LIT+Y+R ++ S VF + + +SW A+ISG+A + + F
Sbjct: 354 DSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFAS 413
Query: 347 V-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ + KPN TF ++ + ++L G+ H+ +++G S V +ALL MY K
Sbjct: 414 MRLSSCKPNDITFATLFSVCTNHALLAL--GKSVHALQMRMGFHSYVHVSNALLSMYAKC 471
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G I E+Q +F K +W A+I +++G + ++ KEME + + PD+++FL VL
Sbjct: 472 GCIDEAQSIFGFIACKDLVSWNAMIFGCSQYGLAKHCLDLLKEMERQHIVPDALSFLGVL 531
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C ++ +GRH F +M+ ++ I+P DHYSCMVD+LGR G LEEA +L+ + P
Sbjct: 532 SSCRHARLVEEGRHCFKTMI-EHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPN 590
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ SLLG+CR+HGN+ +G + A+ +K+EP + +++ ++NLYA G W VA +R
Sbjct: 591 AVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGCAATHIQLANLYATIGCWSDVARVRMA 650
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRS-EEIYRMAECLGSEMK 636
MK++G++ +G SW +VG D ++ F++ + + + + +CL + M+
Sbjct: 651 MKARGLKTNIGCSWIEVG--DKVYSFTAENRSKSHQVNNVLAILDCLQAHME 700
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 251/514 (48%), Gaps = 22/514 (4%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D + A+S C D + F G QLH L+VK G DS V++G++LIT+YSR +L + VF
Sbjct: 12 DQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVF 71
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKN 174
MP K++VSW A++SG+ VE L L MM + + ++F + S C
Sbjct: 72 QTMPTKNTVSWTAMISGFALHNR--VEPCLHLFASMMLSSCKPNDITFATLFSVCTKHAL 129
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L LG+ +H + ++MG+ ++V V N L+S Y+KC +A +F + ++++SW +I
Sbjct: 130 LALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFG 189
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ + + L KEM + P+ ++F+G++ + LV+EGR I+
Sbjct: 190 CSQYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPG 249
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSC-REIISWNALISGYAQNGLSLAAVQAFFGVI 348
+C++ + R ++++ + +S + W +L+ +G +QA +
Sbjct: 250 LDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRL 309
Query: 349 K--ESKPNAYTFGSVLNAV--GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
K K T S+L A A+ G + H ++KVG DS +GS+L+ +Y +
Sbjct: 310 KLEPGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSR 369
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
+ S VF K+ +WTA+IS A H E ++ F M +P+ ITF ++
Sbjct: 370 CSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMRLSSCKPNDITFATL 429
Query: 465 LTVCGRNGMIHKGRHLFD-SMLKDYHIEPSPDHYS-CMVDMLGRVGRLEEAEELVGQIPG 522
+VC + ++ G+ + M +H S H S ++ M + G ++EA+ + G I
Sbjct: 430 FSVCTNHALLALGKSVHALQMRMGFH---SYVHVSNALLSMYAKCGCIDEAQSIFGFI-A 485
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
L +++ C +G + + D L +ME
Sbjct: 486 CKDLVSWNAMIFGCSQYG---LAKHCLDLLKEME 516
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 284/518 (54%), Gaps = 13/518 (2%)
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
N S WN L + + ++A+ +M+R G R + +F A +C LG
Sbjct: 2 NALSTPWNTQLRELAKRCQF-LQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGS 60
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR-MHDRNV-ISWTTMIS---- 233
Q HG K+G V L+S Y K + +A KVF H R + + + ++S
Sbjct: 61 QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 120
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
DAV LF++M +GV N VT +GLI A ++ G +H +K F S+ SV
Sbjct: 121 NSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 180
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
NC ITMY + S+ ++K+FDE+ + +ISWNA++SGYAQNGL+ ++ + + +
Sbjct: 181 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 240
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P+ T VL++ S+ G + G S+P + +AL++MY + G++ ++
Sbjct: 241 HPDPVTLVGVLSSCANLGAQSV--GHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKA 298
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
Q VF+ E++ +WTAII HG E + FKEM G+ PD F+ VL+ C
Sbjct: 299 QAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHA 358
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G+ +G F M ++Y +EP P+HYSCMVD+LGR GRL+EA+ L+ +P P +V +
Sbjct: 359 GLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGA 418
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGAC+IH NVE+ E + ++++EP G YVL+SN+Y+ + + V +R MK K +
Sbjct: 419 LLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKL 478
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
+K+ G S+ ++ +H F GD H +S+EIYR+ E
Sbjct: 479 KKDPGCSYVELK--GRVHPFIVGDRNHLQSDEIYRVLE 514
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 145/504 (28%), Positives = 241/504 (47%), Gaps = 26/504 (5%)
Query: 18 NNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFL 74
N L+ P WNT L K ALS +M G +A T+ AL C +
Sbjct: 2 NALSTP----WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPI 57
Query: 75 FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE--MPNKDSVSWNAILSG 132
G Q H I K G E +V LI+MY + + AR+VF+E K +V +NA++SG
Sbjct: 58 LGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSG 117
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Y + +A+L +M +G+ ++ V+ AC NLELG +H ++K G+ +
Sbjct: 118 YVSNSKCS-DAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDS 176
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFKEMR 247
VSV N ++ Y KC A K+F M + +ISW M+S ++ ++ L++ M
Sbjct: 177 DVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMD 236
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
++GV P+ VT +G++ + + G + + F S P + N LI MYAR ++
Sbjct: 237 MNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLT 296
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVG 366
++ VFD + R ++SW A+I GY +G AVQ F +I+ +P+ F VL+A
Sbjct: 297 KAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS 356
Query: 367 AA--EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
A D L++ + + L+ P S ++D+ G+ G + E+Q + K +
Sbjct: 357 HAGLTDQGLEYFKMMKRN---YQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDG 413
Query: 425 A-WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
A W A++ A H + E F+ + + P++I + +L+ N KG
Sbjct: 414 AVWGALLGACKIHKNVELAELAFERVIE--LEPENIGYYVLLSNIYSNANNSKGVLRIRI 471
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRV 507
M+K+ ++ P V++ GRV
Sbjct: 472 MMKEKKLKKDPG--CSYVELKGRV 493
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 173/344 (50%), Gaps = 21/344 (6%)
Query: 1 MNMYCKSGQFDKALCIFN-NLNNPDI-VSWNTVLSGF---EKSDDALSFALRMNLIGVVF 55
++MYCK D A +F N ++ + V +N ++SG+ K DA+ +MN GV
Sbjct: 82 ISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPV 141
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++VT + C+ G LH +K+G DS+V V N ITMY + G + A+++F
Sbjct: 142 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 201
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
DEMP K +SWNA++SGY Q+G + M G+ D V+ S+C +
Sbjct: 202 DEMPVKGLISWNAMVSGYAQNG-LATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 260
Query: 176 ELGKQIHGVSIKM---GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+G H V KM G+ ++ + N L++ Y++C A VF M +R ++SWT +I
Sbjct: 261 SVG---HEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAII 317
Query: 233 S-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ E AV LFKEM G+ P+ F+ ++ A S L +G + +K N+
Sbjct: 318 GGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKM-MKRNYQ 376
Query: 288 SEPSV--CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALI 328
EP +C++ + R +++++ + + + + + W AL+
Sbjct: 377 LEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALL 420
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 310/559 (55%), Gaps = 14/559 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN--KDSVSWNAILSGYTQ 135
Q+H+ I+ S ++ N LI +Y++ G L +A +F + K V+W ++++ +
Sbjct: 163 QIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLIT-HLS 221
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+ ++A+ +M G + +F+S SA + G+Q+H + K G+ ++
Sbjct: 222 HFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIF 281
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----SMNRED-AVSLFKE-MRLD 249
VG L+ Y+KC A +VF +M +RN++SW +MI N D AV +FK+ +R
Sbjct: 282 VGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREK 341
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
V PN+V+ ++ A + + GR +HG+ +K + V N L+ MY + +
Sbjct: 342 TVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEG 401
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA 368
K+F + R++++WN L+ G+ QN A F+ + +E P+ +F +VL++ +A
Sbjct: 402 VKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHS--SA 459
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+L G H IIK+G + + +L+ MY K GS+ ++ +VF ++ + +WTA
Sbjct: 460 SLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTA 519
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+ISA HG V+ F+ M ++G+ P +TF+ VL+ C G + +G F+SM K +
Sbjct: 520 MISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH 579
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
+ P P+HY+CMVD+LGR G L+EA+ + +P P SV +LLGACR +GN++MG
Sbjct: 580 DMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREA 639
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL 608
A+ L +MEP G+YVL++N+ G E +R+ M GVRKE G SW DV ++ +
Sbjct: 640 AERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFV 699
Query: 609 HGFSSGDNTHPRSEEIYRM 627
F++ D +H S+EIY+M
Sbjct: 700 --FTAHDRSHSSSDEIYKM 716
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 154/546 (28%), Positives = 272/546 (49%), Gaps = 59/546 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN--PDIVSWNTV---LSGFEKSDDALSFALRMNLIGVVF 55
+N+Y K G ++AL +F+ ++ IV+W ++ LS F ALS +M G
Sbjct: 184 INLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYP 243
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T+S+ LS L G QLHSLI K G D+ ++VG AL+ MY++ + A RVF
Sbjct: 244 NQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVF 303
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKN 174
D+MP ++ VSWN+++ G+ + Y A+ +++R K + + VS +S SAC +
Sbjct: 304 DQMPERNLVSWNSMIVGFFHNNLYD-RAVGVFKDVLREKTVIPNEVSVSSVLSACANMGG 362
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L G+Q+HGV +K G V N LM Y KC + K+F+ + DR+V++W ++
Sbjct: 363 LNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMG 422
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ E+A + F MR +G+ P++ +F ++H+ + + +G IH IK ++
Sbjct: 423 FVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKN 482
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ LITMYA+ S+ D+ +VF+ + +ISW A+IS Y +G + ++ F ++
Sbjct: 483 MCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLS 542
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGS 407
E +P+ TF VL+A + + G + + K+ ++ P + ++D+ G+ G
Sbjct: 543 EGIEPSHVTFVCVLSACSHTGRV--EEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGW 600
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ E++R +E+ ++P + ++L
Sbjct: 601 LDEAKRF----------------------------------IESMPMKPTPSVWGALLGA 626
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVGRLEEAEEL-----VGQIP 521
C + G + GR + + + +EP +P +Y + +M R GRLEEA E+ V +
Sbjct: 627 CRKYGNLKMGREAAERL---FEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVR 683
Query: 522 GGPGLS 527
PG S
Sbjct: 684 KEPGCS 689
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 183/377 (48%), Gaps = 13/377 (3%)
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD--RNVISWTT 230
++L+ QIH I Y + + N L++ Y+KC A +F H + +++WT+
Sbjct: 156 RSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTS 215
Query: 231 MISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I+ A+SLF +MR G PN TF ++ A + +V G+ +H L K
Sbjct: 216 LITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHG 275
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F + V L+ MYA+ M + +VFD++ R ++SWN++I G+ N L AV F
Sbjct: 276 FDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFK 335
Query: 346 GVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
V++E PN + SVL+A A L G++ H ++K GL V ++L+DMY
Sbjct: 336 DVLREKTVIPNEVSVSSVLSA--CANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYF 393
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K E ++F ++ W ++ ++ +E N F M +G+ PD +F +
Sbjct: 394 KCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFST 453
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL +H+G + D ++K +++ + ++ M + G L +A ++ I
Sbjct: 454 VLHSSASLAALHQGTAIHDQIIKLGYVK-NMCILGSLITMYAKCGSLVDAYQVFEGIEDH 512
Query: 524 PGLSVLQSLLGACRIHG 540
+S +++ A ++HG
Sbjct: 513 NVIS-WTAMISAYQLHG 528
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE--KSEF 424
A + SLKH + H+ II S P + + L+++Y K G + ++ +F+ T K+
Sbjct: 152 AIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIV 211
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
WT++I+ L+ + ++ F +M G P+ TF S+L+ M+ G+ L S+
Sbjct: 212 TWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL-HSL 270
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ + + + + +VDM + + A + Q+P
Sbjct: 271 IHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP 307
>gi|449439723|ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/546 (31%), Positives = 295/546 (54%), Gaps = 9/546 (1%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y + L C+ G +H+ +K L ++ N ++ Y + GRL ++FDEMP
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP 277
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL-DHVSFTSAASACGHEKNLELG 178
++ VSW+AI++G+ Q G EA+ M G + + + SA AC + L
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPN-EALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICS 336
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----M 234
QI+ +++GYG++V + N ++ + E +A +VF ++ +SW M++ +
Sbjct: 337 YQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQL 396
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+ ++ M L+ V P++ TF ++ ++ + + G +HG +K+ + ++ V N
Sbjct: 397 AYFELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGN 456
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
L MY + + + D K FDE+S ++ SW + +G Q G + A++ + + +
Sbjct: 457 SLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRL 516
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N +T + LN+ A S++ G++ H IK+G D D V +ALLDMY K G + +
Sbjct: 517 NKFTLATALNS--CANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANV 574
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF E+S +WT +I A +G + + F EM P+ ITF+ VL C + G
Sbjct: 575 VFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGF 634
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
I + F SM D+ I PS DHY CMV++LGR G ++EAE+L+ Q+P PG V Q+LL
Sbjct: 635 IDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLL 694
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
GAC +HG++E G+R A+ + ++ +Y+L+SN++A +W+ V ILR+ M+++ V+K
Sbjct: 695 GACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKK 754
Query: 594 EVGFSW 599
G SW
Sbjct: 755 VPGSSW 760
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 222/462 (48%), Gaps = 34/462 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVF-D 56
+N Y K G+ L +F+ + ++VSW+ +++GF + ++ALS RM+ G + +
Sbjct: 257 LNFYVKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPN 316
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T +AL C + + Q+++ IV+ G S V++ NA +T R +L+EA VF+
Sbjct: 317 EFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFE 376
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+KD+VSWNA+++GY Q + + M + ++ D+ +F S +
Sbjct: 377 SCLSKDTVSWNAMMAGYLQLAYFELPKFWR--RMNLESVKPDNFTFASILTGLAALSEFR 434
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
LG Q+HG +K GYG + VGN L Y K + D K F M +V SWT M +
Sbjct: 435 LGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCL 494
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ A+ + EM+ GV N T +++ + ++EG+ HGL IK +
Sbjct: 495 QCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVC 554
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
V N L+ MYA+ M + VF + R ++SW +I G+A NG + A+Q F + K E
Sbjct: 555 VDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGE 614
Query: 351 SKPNAYTFGSVLNAVGAA----------EDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
++PN TF VLNA +S HG + D V +++
Sbjct: 615 AEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHG---------IAPSEDHYV--CMVN 663
Query: 401 MYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYES 441
+ G+ G I E++ + + + W ++ A HGD E+
Sbjct: 664 LLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACLVHGDIET 705
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/621 (30%), Positives = 333/621 (53%), Gaps = 51/621 (8%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR----- 113
++ L C+ ++ L G LH++ +K + S Y+ N I +YS+ L A
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 114 --------------------------VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
+FD++P D VS+N +++ Y GD + A+
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGD-TLSALSLF 128
Query: 148 IEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC 207
EM GL +D +F+ +AC + ++ L +Q+H ++ G+ ++VSV N L++ YSK
Sbjct: 129 GEMREMGLVMDGFTFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKN 186
Query: 208 EVTGDANKVFRRMHD--RNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIG 260
+ +A VF M + R+ +SW +MI + A++L+++M G + T
Sbjct: 187 GILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLAS 246
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES-MQDSEKVFDELSCR 319
++ S + G H IKT F V + LI MYA+ + M +S KVF+E+
Sbjct: 247 VLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGS 306
Query: 320 EIISWNALISGYAQNG-LSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDIS-LKHG 376
+++ WN +ISGY+QN LS+ A++ F + + P+ +F + A+ A ++S G
Sbjct: 307 DLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSF---VCAISACSNLSSPSQG 363
Query: 377 QRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
++ H+ +K + S+ I V +AL+ MY K G++ +++++F + + +II+ A+
Sbjct: 364 KQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQ 423
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
HG +N F++M + P SIT +S+L+ C G + +G+ F+ M + IEP +
Sbjct: 424 HGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAE 483
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM 555
HYSCM+D+LGR G+L EAE L+ +P PG + +LLGACR +GN+E+ E+ A+ +++
Sbjct: 484 HYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQL 543
Query: 556 EPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGD 615
EP + Y++++++Y+ WE A +RK M+ +G+RK+ G SW ++ +H F + D
Sbjct: 544 EPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELN--KRVHVFVAED 601
Query: 616 NTHPRSEEIYRMAECLGSEMK 636
N+HPR +EI+ + + +MK
Sbjct: 602 NSHPRIKEIHMYLDEMFVKMK 622
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 251/472 (53%), Gaps = 24/472 (5%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTY 60
Y K A +F+ + PD+VS+NT+++ + D ALS M +G+V D T+
Sbjct: 84 YAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTF 143
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S ++ C +H G + QLHSL G DS V V N+L+T YS+ G L EA VF+ M
Sbjct: 144 SGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGE 201
Query: 121 --KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+D VSWN+++ Y Q G++A+ +M+ +G +D + S + ++L G
Sbjct: 202 EVRDEVSWNSMIVAYGQH-KRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGG 260
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV-TGDANKVFRRMHDRNVISWTTMI---SM 234
Q H +IK G+ + VG+ L+ Y+KC ++ KVF + +++ W TMI S
Sbjct: 261 LQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQ 320
Query: 235 NRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS-EP 290
N+E +A+ F++M+ G P+D +F+ I A S + +G+ H L +K+ S +
Sbjct: 321 NKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQI 380
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
SV N L+TMY++ ++QD+ K+F + ++ N++I+GYAQ+G+ ++ F ++
Sbjct: 381 SVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAA 440
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSI 408
S P + T S+L+A A ++ G++ + + + G++ + S ++D+ G+ G +
Sbjct: 441 SIAPTSITLVSILSA--CAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKL 498
Query: 409 FESQRVFNETQ-EKSEFAWTAIISALARHGDY---ESVMNQFKEMENKGVRP 456
E++R+ + AW A++ A ++G+ E NQF ++E P
Sbjct: 499 SEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVP 550
>gi|449503129|ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/546 (31%), Positives = 295/546 (54%), Gaps = 9/546 (1%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y + L C+ G +H+ +K L ++ N ++ Y + GRL ++FDEMP
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP 277
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL-DHVSFTSAASACGHEKNLELG 178
++ VSW+AI++G+ Q G EA+ M G + + + SA AC + L
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPN-EALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICS 336
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----M 234
QI+ +++GYG++V + N ++ + E +A +VF ++ +SW M++ +
Sbjct: 337 YQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQL 396
Query: 235 NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+ ++ M L+ V P++ TF ++ ++ + + G +HG +K+ + ++ V N
Sbjct: 397 AYFELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGN 456
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KP 353
L MY + + + D K FDE+S ++ SW + +G Q G + A++ + + +
Sbjct: 457 SLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRL 516
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
N +T + LN+ A S++ G++ H IK+G D D V +ALLDMY K G + +
Sbjct: 517 NKFTLATALNS--CANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANV 574
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF E+S +WT +I A +G + + F EM P+ ITF+ VL C + G
Sbjct: 575 VFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGF 634
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
I + F SM D+ I PS DHY CMV++LGR G ++EAE+L+ Q+P PG V Q+LL
Sbjct: 635 IDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLL 694
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
GAC +HG++E G+R A+ + ++ +Y+L+SN++A +W+ V ILR+ M+++ V+K
Sbjct: 695 GACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKK 754
Query: 594 EVGFSW 599
G SW
Sbjct: 755 VPGSSW 760
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 222/462 (48%), Gaps = 34/462 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVF-D 56
+N Y K G+ L +F+ + ++VSW+ +++GF + ++ALS RM+ G + +
Sbjct: 257 LNFYVKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPN 316
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T +AL C + + Q+++ IV+ G S V++ NA +T R +L+EA VF+
Sbjct: 317 EFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFE 376
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+KD+VSWNA+++GY Q + + M + ++ D+ +F S +
Sbjct: 377 SCLSKDTVSWNAMMAGYLQLAYFELPKFWR--RMNLESVKPDNFTFASILTGLAALSEFR 434
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
LG Q+HG +K GYG + VGN L Y K + D K F M +V SWT M +
Sbjct: 435 LGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCL 494
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ A+ + EM+ GV N T +++ + ++EG+ HGL IK +
Sbjct: 495 QCGEPMKALKVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVC 554
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
V N L+ MYA+ M + VF + R ++SW +I G+A NG + A+Q F + K E
Sbjct: 555 VDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGE 614
Query: 351 SKPNAYTFGSVLNAVGAA----------EDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
++PN TF VLNA +S HG + D V +++
Sbjct: 615 AEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHG---------IAPSEDHYV--CMVN 663
Query: 401 MYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYES 441
+ G+ G I E++ + + + W ++ A HGD E+
Sbjct: 664 LLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACLVHGDIET 705
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 195/641 (30%), Positives = 322/641 (50%), Gaps = 20/641 (3%)
Query: 19 NLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQ 78
L N +VS LS K +A F M+ V +Y C G
Sbjct: 53 KLENLHLVS----LSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRL 108
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H + + + + N L+ MY G ++ ++VFDEM K+ VSW ++S Y ++G+
Sbjct: 109 IHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGE 168
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+AI +M G+R + + S +C LELGKQIH I+ +++V
Sbjct: 169 LE-KAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVET 227
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCP 253
+ + Y +C A VF M +N ++WT ++ + E A+ LF M ++GV
Sbjct: 228 AICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVEL 287
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
++ F ++ GR IH +K SE SV L+ Y + ++ + + F
Sbjct: 288 DEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSF 347
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDIS 372
+S +SW+ALISG++Q+G ++ F + E N++ + SV A A +++
Sbjct: 348 GRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLN 407
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
+ G + H IK GL S SA++ MY K G + ++R F E AWTAIIS
Sbjct: 408 M--GSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISG 465
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
A HG+ + F+ M++ GVRP+++TF++VLT C +G++ + + SM +DY ++P
Sbjct: 466 YAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKP 525
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
+ DHY CM+D R G L+EA EL+ ++P P +SLLG C H ++++G+ A+ L
Sbjct: 526 TIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENL 585
Query: 553 MKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFS 612
+++P + Y+L+ NLY+ G WE +RK M + ++KEV SW V +H F
Sbjct: 586 FRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVK--GQVHRFV 643
Query: 613 SGDNTHPRSEEIYRMAE-----CLGSEMKYLNSKRERAIAL 648
GD HP++E IY E + S ++ LN + + + +L
Sbjct: 644 VGDRHHPQTEAIYSKLEEFKCSVIDSPVRLLNEEDDVSCSL 684
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 214/455 (47%), Gaps = 26/455 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MYC G +F+ + ++VSW V+S + K+ + A+ M G+ ++
Sbjct: 129 LRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNS 188
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y + L CL G Q+HS +++ L++ + V A+ MY R G L A+ VFD
Sbjct: 189 AVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDG 248
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +++V+W ++ GYTQ V A+ M +G+ LD F+ C ++ ++
Sbjct: 249 MDAQNAVTWTGLMVGYTQAKKLEV-ALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDM 307
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+QIH +K+G + VSVG L+ Y KC A + F R+ + N +SW+ +I
Sbjct: 308 GRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S ED + +F +R +GV N + + A + + G HG IK +S
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYG 427
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-----FGV 347
+ ++TMY++ + + + F+ + + ++W A+ISGYA +G + A+ F +GV
Sbjct: 428 ESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGV 487
Query: 348 IKESKPNAYTFGSVLNAV---GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+PNA TF +VL A G + G + +K +D ++D Y +
Sbjct: 488 ----RPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDH----YDCMIDTYSR 539
Query: 405 RGSIFESQRVFNETQ-EKSEFAWTAIISALARHGD 438
G + E+ + N E +W +++ H D
Sbjct: 540 AGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCD 574
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/519 (34%), Positives = 294/519 (56%), Gaps = 17/519 (3%)
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
+NA++SGY GD A L +++ G D +F + +C + G+Q+HGV
Sbjct: 1 PFNALVSGYAI-GDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGV 59
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDA 239
IKMG+ ++ V N L+ YS C+ GDA++VF M R+V+SWT +IS ++A
Sbjct: 60 IIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEA 119
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
V LF +R+D V PN TF+ ++ A + G+ IHGL K+ F V N L+ M
Sbjct: 120 VGLF--LRMD-VEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDM 176
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
Y + + +++VFDEL+ ++I+SW ++ISG Q A++ F + +P+
Sbjct: 177 YVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIIL 236
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
SVL+A A +L +G+ H HI + + D +G+A++DMY K G I S ++FN
Sbjct: 237 TSVLSA--CARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGM 294
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
K+ W A+++ LA HG V+ F+EM G+RP+ +TFL++LT C G++++GR
Sbjct: 295 PHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGR 354
Query: 479 HLFDSML-KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
F+ M + Y++ P +HY CMVD+L R L+EA EL +P P + ++ +LL AC+
Sbjct: 355 QYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACK 414
Query: 538 IHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGF 597
+GN E+ + I D ++++ SG YVL+SN++A W+ V +R+ MK KG++K G
Sbjct: 415 ENGNTELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPG- 473
Query: 598 SWADVGDIDG-LHGFSSGDNTHPRSEEIYRMAECLGSEM 635
+ V ++DG H F GD HP+ + I + + L ++
Sbjct: 474 --STVIELDGKAHEFIVGDTRHPQDKRIRLLLKILSDQI 510
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 182/347 (52%), Gaps = 13/347 (3%)
Query: 27 SWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLI 83
+N ++SG+ ++ A R+ G + D T+ L C G G Q+H +I
Sbjct: 1 PFNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVI 60
Query: 84 VKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEA 143
+K G +YV N+L+ YS R +A RVFDEM +D VSW ++SGY + G + EA
Sbjct: 61 IKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFD-EA 119
Query: 144 ILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMST 203
+ + M + + +F S ACG + L +GK IHG+S K +G + V N LM
Sbjct: 120 VGLFLRM---DVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDM 176
Query: 204 YSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTF 258
Y KC A +VF + +++++SWT++IS ++A+ LF++M+ G+ P+ +
Sbjct: 177 YVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIIL 236
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC 318
++ A + + GR +H + + + ++ MYA+ ++ S ++F+ +
Sbjct: 237 TSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPH 296
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
+ +++WNAL++G A +G + ++ F +++ +PN TF ++L A
Sbjct: 297 KNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTA 343
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 169/347 (48%), Gaps = 17/347 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y +F A +F+ + D+VSW V+SG+ ++ D+A+ LRM+ V +A
Sbjct: 76 VHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRMD---VEPNA 132
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ + L C +G+L G +H L K + V NAL+ MY + G L A++VFD
Sbjct: 133 ATFVSVLVAC-GRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFD 191
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E+ KD VSW +I+SG Q + EA+ +M G+ D + TS SAC L+
Sbjct: 192 ELAEKDIVSWTSIISGLVQ-CNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALD 250
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G+ +H + + +G ++ Y+KC + ++F M +NV++W +++
Sbjct: 251 YGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLA 310
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + LF+EM G+ PN+VTF+ ++ A LV EGR + P
Sbjct: 311 MHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPR 370
Query: 292 V--CNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNG 335
+ C++ + R + ++ ++ + ++ AL+S +NG
Sbjct: 371 LEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENG 417
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/590 (31%), Positives = 309/590 (52%), Gaps = 30/590 (5%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ AL C G +H + GL ++++V AL+ MY + L +A +F M
Sbjct: 12 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 71
Query: 119 PNKDSVSWNAILSGYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
P +D V+WNA+L+GY G Y V +L++ +M LR + + + + L
Sbjct: 72 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSM-QMQMHRLRPNASTLVALLPLLAQQGALA 130
Query: 177 LGKQIHGVSIKMGYGTH----------VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
G +H I+ + V +G L+ Y+KC A +VF M RN +
Sbjct: 131 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 190
Query: 227 SWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIG-LIHAISIGNLVKEGRMIHGL 280
+W+ +I A LFK M G+C T I + A + + ++ G +H L
Sbjct: 191 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHAL 250
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
K+ ++ + N L++MYA+ + + +FDE++ ++ +S++AL+SGY QNG A
Sbjct: 251 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG---RA 307
Query: 341 VQAFFGVIK----ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
+AF K +P+A T S++ A + +L+HG+ H +I GL S+ + +
Sbjct: 308 EEAFLVFKKMQACNVEPDAATMVSLIPA--CSHLAALQHGRCSHGSVIIRGLASETSICN 365
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
AL+DMY K G I S++VFN + +W +I+ HG + F EM N G P
Sbjct: 366 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPP 425
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
D +TF+ +L+ C +G++ +G+H F M Y + P +HY CMVD+L R G L+EA E
Sbjct: 426 DGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF 485
Query: 517 VGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDW 576
+ +P + V +LLGACR++ N+++G++++ + ++ P G+G++VL+SN+Y+ G +
Sbjct: 486 IQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRF 545
Query: 577 EMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
+ A +R K +G +K G SW ++ LH F GD +HP+S EIYR
Sbjct: 546 DEAAEVRIIQKVQGFKKSPGCSWIEIN--GSLHAFVGGDQSHPQSPEIYR 593
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 189/386 (48%), Gaps = 23/386 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE-----KSDDALSFALRMNLIGVVF 55
++MY K A IF + D+V+WN +L+G+ A +++M + +
Sbjct: 52 LDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRP 111
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIV----------KFGLDSEVYVGNALITMYSRW 105
+A T L G +H+ + K L V +G AL+ MY++
Sbjct: 112 NASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKC 171
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTS 164
G L+ ARRVFD MP ++ V+W+A++ G+ +A L M+ +GL L S S
Sbjct: 172 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRM-TQAFLLFKAMLAQGLCFLSPTSIAS 230
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
A AC +L +G+Q+H + K G ++ GN L+S Y+K + A +F M ++
Sbjct: 231 ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKD 290
Query: 225 VISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
+S++ ++S E+A +FK+M+ V P+ T + LI A S ++ GR HG
Sbjct: 291 TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 350
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
I SE S+CN LI MYA+ + S +VF+ + R+I+SWN +I+GY +GL
Sbjct: 351 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKE 410
Query: 340 AVQAFFGVIKES-KPNAYTFGSVLNA 364
A F + P+ TF +L+A
Sbjct: 411 ATALFLEMNNLGFPPDGVTFICLLSA 436
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 184/394 (46%), Gaps = 28/394 (7%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M+R + ++ +F A AC + G+ IH +I G + V L+ Y KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 210 TGDANKVFRRMHDRNVISWTTMIS-------MNREDAVSLFKEMRLDGVCPNDVTFIGLI 262
DA +F M R++++W M++ + A L +M++ + PN T + L+
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 263 HAISIGNLVKEGRMIHGLCI----------KTNFLSEPSVCNCLITMYARFESMQDSEKV 312
++ + +G +H CI K+ + L+ MYA+ S+ + +V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTF---GSVLNAVGAAE 369
FD + R ++W+ALI G+ L QAF + K F S+ +A+ A
Sbjct: 181 FDAMPARNEVTWSALIGGFV---LCSRMTQAFL-LFKAMLAQGLCFLSPTSIASALRACA 236
Query: 370 DIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+ L+ G++ H+ + K G+ +D G++LL MY K G I ++ +F+E K +++A
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS-MLKD 487
++S ++G E FK+M+ V PD+ T +S++ C + GR S +++
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
E S + ++DM + GR++ + ++ +P
Sbjct: 357 LASETSI--CNALIDMYAKCGRIDLSRQVFNMMP 388
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K+G D+A+ +F+ + D VS++ ++SG+ ++++A +M V DA
Sbjct: 267 LSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDA 326
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + + C G H ++ GL SE + NALI MY++ GR+ +R+VF+
Sbjct: 327 ATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNM 386
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP++D VSWN +++GY G G EA +EM G D V+F SAC H +
Sbjct: 387 MPSRDIVSWNTMIAGYGIHG-LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIE 445
Query: 178 GKQIHGVSIKMGYG 191
GK V MG+G
Sbjct: 446 GKHWFHV---MGHG 456
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 284/518 (54%), Gaps = 13/518 (2%)
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
N S WN L + + ++A+ +M+R G R + +F A +C LG
Sbjct: 11 NALSTPWNTQLRELAKRCQF-LQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGS 69
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR-MHDRNV-ISWTTMIS---- 233
Q HG K+G V L+S Y K + +A KVF H R + + + ++S
Sbjct: 70 QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 129
Query: 234 -MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+AV LF++M +GV N VT +GLI A ++ G +H +K F S+ SV
Sbjct: 130 NSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 189
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
NC ITMY + S+ ++K+FDE+ + +ISWNA++SGYAQNGL+ ++ + + +
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P+ T VL++ S+ G I G S+P + +AL++MY + G++ ++
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSV--GHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKA 307
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
Q VF+ E++ +WTAII HG E + FKEM G+ PD F+ VL+ C
Sbjct: 308 QAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHA 367
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G+ +G F M ++Y +EP P+HYSCMVD+LGR GRL+EA+ L+ +P P +V +
Sbjct: 368 GLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGA 427
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGAC+IH NVE+ E + ++++EP G YVL+SN+Y+ + + V +R MK K +
Sbjct: 428 LLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKL 487
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
+K+ G S+ ++ +H F GD H +S+EIYR+ E
Sbjct: 488 KKDPGCSYVELK--GRVHPFIVGDRNHLQSDEIYRVLE 523
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 150/521 (28%), Positives = 246/521 (47%), Gaps = 33/521 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
M +CKS N L+ P WNT L K ALS +M G +A
Sbjct: 1 MKNHCKSKSM-------NALSTP----WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNA 49
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ AL C + G Q H I K G E +V LI+MY + + AR+VF+E
Sbjct: 50 FTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEE 109
Query: 118 --MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
K +V +NA++SGY + EA+L +M +G+ ++ V+ AC NL
Sbjct: 110 NFHSRKLTVCYNALVSGYVSNSKCS-EAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINL 168
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
ELG +H ++K G+ + VSV N ++ Y KC A K+F M + +ISW M+S
Sbjct: 169 ELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGY 228
Query: 236 REDAVS-----LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++ ++ L++ M ++GV P+ VT +G++ + + G + + F S P
Sbjct: 229 AQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNP 288
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ N LI MYAR ++ ++ VFD + R ++SW A+I GY +G AVQ F +I+
Sbjct: 289 FLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRS 348
Query: 351 S-KPNAYTFGSVLNAVGAA--EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+P+ F VL+A A D L++ + + L+ P S ++D+ G+ G
Sbjct: 349 GIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRN---YQLEPGPEHYSCMVDLLGRAGR 405
Query: 408 IFESQRVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ E+Q + K + A W A++ A H + E F+ + + P++I + +L+
Sbjct: 406 LKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE--LEPENIGYYVLLS 463
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRV 507
N KG M+K+ ++ P V++ GRV
Sbjct: 464 NIYSNANNSKGVLRIRIMMKEKKLKKDPG--CSYVELKGRV 502
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 302/560 (53%), Gaps = 23/560 (4%)
Query: 88 LDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILAL 147
+D + N + + R+G L AR VFDEMP +D VSWN ++SGY G + +A
Sbjct: 772 IDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFD-DAFRFF 830
Query: 148 IEMMRKGLRLDHVSFTS----AASACGHEKNLELGKQIHGVSIKMGYG-THVSVGNVLMS 202
EM + G+R ++++ +SAC GKQIH I+ G ++V VGN L+
Sbjct: 831 SEMQKAGIRPSGFTYSTLLSFVSSACR-------GKQIHASMIRNGVDLSNVVVGNSLIG 883
Query: 203 TYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVT 257
Y K V A VF M + ++ISW ++I S + A+ F MR G P+ T
Sbjct: 884 MYGKFGVVDYAFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFT 943
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
+I S +++G I LCI+ FLS V + I ++++ ++DS +VF+E+
Sbjct: 944 VSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIY 1003
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHG 376
+ + NA+IS YA +G A+Q F ++E+ +P +T VL+AV + + G
Sbjct: 1004 QWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSIL--LPVDQG 1061
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
+ HS ++K GL+SD IV S+L++MY K G I + + F + + +W +I LA +
Sbjct: 1062 SQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYN 1121
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
G + FKE+ G PD IT VL C G++ +G +F SM K+Y + P+ +H
Sbjct: 1122 GRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEH 1181
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
Y+C+VDM+ R G+L+EA ++V +P P + SLL AC I+G++ ER+A+ +M++E
Sbjct: 1182 YACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELE 1241
Query: 557 PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDN 616
P S Y++++ Y +G WE + + + MK KGVRK +G SW +G + + F
Sbjct: 1242 PQSSLPYLVLAQAYEMRGRWESLVRVXRAMKEKGVRKVIGCSW--IGIKNHVFVFKENQL 1299
Query: 617 THPRSEEIYRMAECLGSEMK 636
H ++IY + L E++
Sbjct: 1300 LHIGGKDIYFILRLLIQEIE 1319
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 191/723 (26%), Positives = 331/723 (45%), Gaps = 124/723 (17%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS-DDALSFALRMNLIGVVFDAVT 59
+ MY + +A +F + + SWNT++ G+ KS S L FD++
Sbjct: 49 LQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLEL--------FDSMP 100
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ A S+ N +I+ +++ G L ARR+F+EMP
Sbjct: 101 HKDAFSW-----------------------------NVVISGFAKEGNLEVARRLFNEMP 131
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL---DHVSFTSAASACGHEKNLE 176
K+ ++WN+++ GY +G EA+ ++ L D + AC + L+
Sbjct: 132 WKNGIAWNSMIHGYACNGR-PKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALD 190
Query: 177 LGKQIH--------------GVSIKMGYGTHVSVGNV-----------------LMSTYS 205
GKQIH G S+ YG + + L+S Y+
Sbjct: 191 CGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYA 250
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMIS---MNRE--DAVSLFKEMRLDGVCPNDVTFIG 260
C DA ++F + V+ W +MIS N E +A+ LF MR GV + TF
Sbjct: 251 SCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFAS 310
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR----------FESMQ--- 307
++ A S ++ +G +H K F ++ + + L+ MY++ F +Q
Sbjct: 311 VLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYD 370
Query: 308 ------------------DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
D+ ++FD + + +ISWN++I G++QN + A+ F + K
Sbjct: 371 TILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNK 430
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ + ++ V++A + SL+ G++ + +GL+ D I+ ++L+D Y K G +
Sbjct: 431 LGLRMDKFSLAGVISACASIS--SLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLV 488
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+++F+ + E W +++ A +G +N F +M + GV+P ITF+ VL+ C
Sbjct: 489 EHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSAC 548
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +GR F +M DYHI P +HYSCMVD+ R G LE+A L+ Q+P S+
Sbjct: 549 DHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSM 608
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
S+L C HGN +G+++A ++ ++P SG+YV +S +YA DW A +RK M
Sbjct: 609 WSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYD 668
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSG----DNTHPRSEEIYRMA-----ECLGSEMKYLN 639
K + K+ F D+ +G G SS R + R+ EC + K++
Sbjct: 669 KKIPKDTSF---DIAGEEGXEGLSSETKEVTKMKQRQNLVLRLVAEKKRECDERDQKFMA 725
Query: 640 SKR 642
++R
Sbjct: 726 ARR 728
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 230/476 (48%), Gaps = 31/476 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
+ + + G+ ++A +F+ + D+VSWNT++SG F DDA F M G+
Sbjct: 783 LKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSG 842
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD-SEVYVGNALITMYSRWGRLVEARRVFD 116
TYST LSF G Q+H+ +++ G+D S V VGN+LI MY ++G + A VF
Sbjct: 843 FTYSTLLSFV---SSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFI 899
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M D +SWN+++ + G Y A+ + M G D + ++ + C + ++LE
Sbjct: 900 TMEELDIISWNSLIWSCGKSG-YQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLE 958
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G+QI + I++G+ ++ V + + +SKC D+ +VF ++ + + MIS
Sbjct: 959 KGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYA 1018
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E+A+ LF + + P + T ++ A+SI V +G IH L +K+ S+
Sbjct: 1019 WHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVI 1078
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKE 350
V + L+ MYA+F + + K F ++ R++ISWN +I G A NG A++ F +I
Sbjct: 1079 VASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGG 1138
Query: 351 SKPNAYTFGSVLNAVGAA----EDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGK 404
P+ T VL A E +S+ +I P + + ++DM +
Sbjct: 1139 PPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVI-------PAIEHYACIVDMMSR 1191
Query: 405 RGSIFESQRVFN-ETQEKSEFAWTAIISALARHGDY---ESVMNQFKEMENKGVRP 456
G + E+ + E S W +++ A +GD E V + E+E + P
Sbjct: 1192 GGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLP 1247
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 149/635 (23%), Positives = 246/635 (38%), Gaps = 161/635 (25%)
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEA 111
V D + + L C ++ G LH L +K G L S + +GN L+ MYSR + EA
Sbjct: 2 VDLDLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREA 61
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+++F+EMP ++ SWN ++ GY + G G +E+ D S+ S
Sbjct: 62 QQLFEEMPKRNCFSWNTMIEGYLKSGSKGKS-----LELFDSMPHKDAFSWNVVISGFAK 116
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
E NLE+ A ++F M +N I+W +M
Sbjct: 117 EGNLEV-----------------------------------ARRLFNEMPWKNGIAWNSM 141
Query: 232 I-----SMNREDAVSLFKEMRLDGV---CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
I + ++AV LFK++ L+ + C + ++ A + + G+ IH +
Sbjct: 142 IHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVV 201
Query: 284 T-----------------------------NFLSEPSV--CNCLITMYARFESMQDSEKV 312
N + EP + LI+ YA M D+ ++
Sbjct: 202 DEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRI 261
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAY-TFGSVLNAVGAAEDI 371
F S ++ WN++ISGY N +L A++ F + ++ Y TF SVL+A I
Sbjct: 262 FCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGII 321
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK--------------------------- 404
G + H+H+ KVG +D I+ SAL+DMY K
Sbjct: 322 D--QGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMIT 379
Query: 405 ----RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
G I +++++F+ KS +W ++I +++ ++ F EM G+R D +
Sbjct: 380 VYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFS 439
Query: 461 FLSVLTVCG-----------------------------------RNGMIHKGRHLFDSML 485
V++ C + G++ GR LFD M+
Sbjct: 440 LAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMM 499
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG---GPGLSVLQSLLGACRIHGNV 542
K + ++ M+ G EA + Q+ P +L AC G V
Sbjct: 500 KSDEVP-----WNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLV 554
Query: 543 EMGERIADALMKME---PAGSGSYVLMSNLYAEKG 574
E G + A MK++ G Y M +LYA G
Sbjct: 555 EEGRKWFYA-MKLDYHINPGIEHYSCMVDLYARAG 588
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 140/584 (23%), Positives = 255/584 (43%), Gaps = 71/584 (12%)
Query: 22 NPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQ 78
NP I ++ ++ + ++ +DA++ +M L D +S+ L C+ H + G +
Sbjct: 571 NPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKA---DTSMWSSVLRGCVAHGNNILGKK 627
Query: 79 LHSLIVKFGLDSE---VYVG-NALITMYSRWGRLVEARRV-FDEMPNKDSVSWNAILSGY 133
+ I+ LD E YV + + + WGR + R++ +D+ KD+ + ++G
Sbjct: 628 VAKRIID--LDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDT---SFDIAG- 681
Query: 134 TQDGDYGVEAILALIEMM--RKGLRLDHVSFTSAASACGHEKNLELGKQI--HGVSIKMG 189
++G G+ + + M R+ L L V+ +K + + + + IK+G
Sbjct: 682 -EEGXEGLSSETKEVTKMKQRQNLVLRLVAEKKRECDERDQKFMAARRTLLEFDMLIKVG 740
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---------------- 233
+ TH +GN + YS+ D+ +VF + D+N+ISW +
Sbjct: 741 FNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFD 800
Query: 234 -MNREDAVS-------------------LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE 273
M + D VS F EM+ G+ P+ T+ L+ +S
Sbjct: 801 EMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSAC---R 857
Query: 274 GRMIHGLCIKTNF-LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G+ IH I+ LS V N LI MY +F + + VF + +IISWN+LI
Sbjct: 858 GKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSCG 917
Query: 333 QNGLSLAAVQAFFGVIKES---KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
++G A++ F V+ S P+ +T +V+ +D L+ G++ + I+VG
Sbjct: 918 KSGYQNLALRQF--VLMRSVGYSPDQFTVSTVITVCSNLQD--LEKGEQIFALCIRVGFL 973
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
S+ IV SA +D++ K + +S RVF E + A+IS+ A HG E+ + F
Sbjct: 974 SNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLT 1033
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
+ +RP T VL+ + +G + ++K +E S +V+M + G
Sbjct: 1034 LRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKS-GLESDVIVASSLVEMYAKFGL 1092
Query: 510 LEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALM 553
++ A + +I G L +++ +G V I L+
Sbjct: 1093 IDSAMKTFAKI-GARDLISWNTMIMGLAYNGRVSKALEIFKELL 1135
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 186/591 (31%), Positives = 311/591 (52%), Gaps = 32/591 (5%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T+ AL C G +H + GL ++++V AL+ MY + L +A +F M
Sbjct: 12 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 71
Query: 119 PNKDSVSWNAILSGYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
P +D V+WNA+L+GY G Y V +L++ +M LR + + + + L
Sbjct: 72 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSM-QMQMHRLRPNASTLVALLPLLAQQGALA 130
Query: 177 LGKQIHGVSIKMGYGTH----------VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
G +H I+ + V +G L+ Y+KC A +VF M RN +
Sbjct: 131 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 190
Query: 227 SWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIG-LIHAISIGNLVKEGRMIHGL 280
+W+ +I A LFK M G+C T I + A + + ++ G +H L
Sbjct: 191 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHAL 250
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
K+ ++ + N L++MYA+ + + +FDE++ ++ +S++AL+SGY QNG A
Sbjct: 251 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG---RA 307
Query: 341 VQAFFGVIKESK-----PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
+AF V K+ + P+A T S++ A + +L+HG+ H +I GL S+ +
Sbjct: 308 EEAFL-VFKKMQACNVEPDAATMVSLIPA--CSHLAALQHGRCSHGSVIIRGLASETSIC 364
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+AL+DMY K G I S++VFN + +W +I+ HG + F EM N G
Sbjct: 365 NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFP 424
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
PD +TF+ +L+ C +G++ +G+H F M Y + P +HY CMVD+L R G L+EA E
Sbjct: 425 PDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYE 484
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
+ +P + V +LLGACR++ N+++G++++ + ++ P G+G++VL+SN+Y+ G
Sbjct: 485 FIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGR 544
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
++ A +R K +G +K G SW ++ LH F GD +HP+S EIYR
Sbjct: 545 FDEAAEVRIIQKVQGFKKSPGCSWIEIN--GSLHAFVGGDQSHPQSPEIYR 593
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 189/386 (48%), Gaps = 23/386 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE-----KSDDALSFALRMNLIGVVF 55
++MY K A IF + D+V+WN +L+G+ A +++M + +
Sbjct: 52 LDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRP 111
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIV----------KFGLDSEVYVGNALITMYSRW 105
+A T L G +H+ + K L V +G AL+ MY++
Sbjct: 112 NASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKC 171
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTS 164
G L+ ARRVFD MP ++ V+W+A++ G+ +A L M+ +GL L S S
Sbjct: 172 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRM-TQAFLLFKAMLAQGLCFLSPTSIAS 230
Query: 165 AASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
A AC +L +G+Q+H + K G ++ GN L+S Y+K + A +F M ++
Sbjct: 231 ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKD 290
Query: 225 VISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
+S++ ++S E+A +FK+M+ V P+ T + LI A S ++ GR HG
Sbjct: 291 TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 350
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
I SE S+CN LI MYA+ + S +VF+ + R+I+SWN +I+GY +GL
Sbjct: 351 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKE 410
Query: 340 AVQAFFGVIKES-KPNAYTFGSVLNA 364
A F + P+ TF +L+A
Sbjct: 411 ATALFLEMNNLGFPPDGVTFICLLSA 436
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 184/394 (46%), Gaps = 28/394 (7%)
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M+R + ++ +F A AC + G+ IH +I G + V L+ Y KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 210 TGDANKVFRRMHDRNVISWTTMIS-------MNREDAVSLFKEMRLDGVCPNDVTFIGLI 262
DA +F M R++++W M++ + A L +M++ + PN T + L+
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 263 HAISIGNLVKEGRMIHGLCI----------KTNFLSEPSVCNCLITMYARFESMQDSEKV 312
++ + +G +H CI K+ + L+ MYA+ S+ + +V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTF---GSVLNAVGAAE 369
FD + R ++W+ALI G+ L QAF + K F S+ +A+ A
Sbjct: 181 FDAMPARNEVTWSALIGGFV---LCSRMTQAFL-LFKAMLAQGLCFLSPTSIASALRACA 236
Query: 370 DIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+ L+ G++ H+ + K G+ +D G++LL MY K G I ++ +F+E K +++A
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS-MLKD 487
++S ++G E FK+M+ V PD+ T +S++ C + GR S +++
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
E S + ++DM + GR++ + ++ +P
Sbjct: 357 LASETSI--CNALIDMYAKCGRIDLSRQVFNMMP 388
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K+G D+A+ +F+ + D VS++ ++SG+ ++++A +M V DA
Sbjct: 267 LSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDA 326
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + + C G H ++ GL SE + NALI MY++ GR+ +R+VF+
Sbjct: 327 ATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNM 386
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP++D VSWN +++GY G G EA +EM G D V+F SAC H +
Sbjct: 387 MPSRDIVSWNTMIAGYGIHG-LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIE 445
Query: 178 GKQIHGVSIKMGYG 191
GK V MG+G
Sbjct: 446 GKHWFHV---MGHG 456
>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/552 (34%), Positives = 307/552 (55%), Gaps = 23/552 (4%)
Query: 98 LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL 157
L+ Y G +AR +FDEMP +D V+W ++SGYT +Y +A ++M++ G
Sbjct: 50 LLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEY-TQAWSVFVDMVKNGNDP 108
Query: 158 DHV-SFTSAASACGHEKNLELGKQIHGVSIKMGYGT-HVSVGNVLMSTYSKCEV-TGDAN 214
+ + +S AC K + G+ +HG++IK + + V N LM Y+ C V DA
Sbjct: 109 PNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMRDAC 168
Query: 215 KVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTF-IGLIHAISIG 268
VF + ++NV+SWTT+I+ N A+ +F+EM LDGV N + I + SIG
Sbjct: 169 VVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACASIG 228
Query: 269 NLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI 328
+ GR IH IK F S+ V N ++ MY R + ++ K F++++ +++I+WN LI
Sbjct: 229 SQ-NFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTLI 287
Query: 329 SGYAQNGLSLAAVQAFFGVIK-ESK---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHII 384
+GY ++ +++ FF + ES+ PN +TF S++ A A +L+ GQ+ H I
Sbjct: 288 AGYERSD----SIEPFFIFSQMESEGFSPNCFTFTSLVAA--CANAAALQCGQQVHGGIF 341
Query: 385 KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMN 444
+ GLD + + +AL+DMY K G+I +SQ+ F+E + +WT+++ HG + +
Sbjct: 342 RRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVE 401
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDML 504
F EM G+RPD + F++VL C G++ +G + M+ DYHI+P+ + Y C+VD+L
Sbjct: 402 LFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLL 461
Query: 505 GRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYV 564
GR GR+E+A +L+ +P SV +LLGAC+ H +G+ A + + P +YV
Sbjct: 462 GRPGRVEDAYQLIRSMPFMADESVWGALLGACKAHNFSRLGKLAAKKALALRPNMVETYV 521
Query: 565 LMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
++SN+YA +G W A +RK MK G RK G SW +V + ++ F G+ E +
Sbjct: 522 MLSNIYAAEGKWGEAARMRKLMKRAGCRKVAGRSWIEVR--NQVYSFVVGNKMGSHKEWV 579
Query: 625 YRMAECLGSEMK 636
Y + E MK
Sbjct: 580 YEVLELPVQHMK 591
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 229/447 (51%), Gaps = 18/447 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD-ALSFALRMNLIGVVFD---AVT 59
Y + G +A +F+ + D+V+W T++SG+ ++ ++++ ++++ D A T
Sbjct: 54 YFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNGNDPPNAFT 113
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGR-LVEARRVFDE 117
S+ L C + G +H L +K ++ +YV NAL+ MY+ G + +A VF +
Sbjct: 114 ISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMRDACVVFHD 173
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ K+ VSW +++GYT G+ G A+ EM+ G+ L+ S + A AC +
Sbjct: 174 IKEKNVVSWTTLIAGYTHRGN-GNRALQIFREMLLDGVALNPHSISIAVRACASIGSQNF 232
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR 236
G+QIH IK G+ + + V N ++ Y +C +ANK F M ++++I+W T+I+ R
Sbjct: 233 GRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTLIAGYER 292
Query: 237 EDAVS---LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
D++ +F +M +G PN TF L+ A + ++ G+ +HG + +
Sbjct: 293 SDSIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLELA 352
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
N LI MYA+ ++ DS+K F E+SC ++SW +++ GY +G AV+ F +++ +
Sbjct: 353 NALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSGIR 412
Query: 353 PNAYTFGSVLNAVGAAE--DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ F +VL+A A D L++ + I + + + ++D+ G+ G + +
Sbjct: 413 PDQVVFMAVLHACSHAGLVDQGLRY---INCMINDYHIKPNQEIYGCVVDLLGRPGRVED 469
Query: 411 SQRVFNETQ-EKSEFAWTAIISALARH 436
+ ++ E W A++ A H
Sbjct: 470 AYQLIRSMPFMADESVWGALLGACKAH 496
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 182/350 (52%), Gaps = 17/350 (4%)
Query: 1 MNMYCKSGQFDKALCI-FNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFD 56
M+MY G + C+ F+++ ++VSW T+++G+ + AL M L GV +
Sbjct: 154 MDMYASCGVGMRDACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALN 213
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ S A+ C FG Q+H+ ++K G +S++ V N+++ MY R G L EA + F+
Sbjct: 214 PHSISIAVRACASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFN 273
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+M KD ++WN +++GY + +E +M +G + +FTS +AC + L+
Sbjct: 274 DMTEKDLITWNTLIAGYERSDS--IEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQ 331
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
G+Q+HG + G ++ + N L+ Y+KC D+ K F M N++SWT+M+
Sbjct: 332 CGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYG 391
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEP 290
++AV LF EM G+ P+ V F+ ++HA S LV +G R I+ C+ ++ +P
Sbjct: 392 THGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYIN--CMINDYHIKP 449
Query: 291 S--VCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNGLS 337
+ + C++ + R ++D+ ++ + S W AL+ + S
Sbjct: 450 NQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESVWGALLGACKAHNFS 499
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-EN 451
I+ + LL Y +RG +++ +F+E E+ AWT +IS +Y + F +M +N
Sbjct: 45 ILATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKN 104
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGR 478
P++ T SVL C + GR
Sbjct: 105 GNDPPNAFTISSVLKACKGMKRVFCGR 131
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 196/648 (30%), Positives = 343/648 (52%), Gaps = 18/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVV--FDAV 58
++ Y K G D A F++ N D VSWN ++ G S+ ++ L + G F
Sbjct: 89 IDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHG-NFSNGSIMAGLCWFIKGRFAHFQPN 147
Query: 59 TYSTALSFCLDHEGFLF--GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
S L E ++ G H I + G + + V N+L+++Y+ + A ++F
Sbjct: 148 ISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAE-VHMYFAYKLFG 206
Query: 117 EMPNK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
EM + D VSW+ ++ G+ Q G+ ++ + G+ D V+ S AC + K++
Sbjct: 207 EMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDI 266
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
LG +HG+ I G + VGN L+ YSKC A K F+ + ++N+ISW M+S
Sbjct: 267 SLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAY 326
Query: 234 -MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+N +A++L M +G ++VT ++ + R +HG+ I+ + S
Sbjct: 327 ILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNE 386
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ N +I YA+ ++ + VFD ++ +++++W+ +I+G+A+NG A+ F + +E
Sbjct: 387 LLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEE 446
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
PN + +++ A + + L+ + H ++ GL S+ +G++++DMY K G I
Sbjct: 447 VIPNNVSIMNLMEACAVSAE--LRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEA 504
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S R FN+ +K+ W+A+ISA +G + F++++ G +P+++T LS+L+ C
Sbjct: 505 SIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSH 564
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG--GPGLSV 528
G+I +G F SM++ + IEP +HYSC+VDML R G+ EA EL+ ++P G S+
Sbjct: 565 GGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASI 624
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LL +CR +GN+ +G A ++++EP S Y+L SNLYA G A +R+ K
Sbjct: 625 WGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKE 684
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
KGV+ G+S + F +GD +PR++EIY M + L MK
Sbjct: 685 KGVKVVAGYSLVHIN--SQTWRFVAGDVLNPRADEIYLMVKKLHGVMK 730
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 239/498 (47%), Gaps = 26/498 (5%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D + L C + F G +H ++K G S + N+ I Y ++G L A+R F
Sbjct: 47 DTWVLPSILKAC-SNTSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAF 105
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV-----SFTSAASACG 170
D NKDSVSWN ++ G +G +I+A + KG R H S A
Sbjct: 106 DSTKNKDSVSWNVMVHGNFSNG-----SIMAGLCWFIKG-RFAHFQPNISSLLLVIQAFR 159
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN-VISWT 229
K G HG + G+ +SV N L+S Y++ + A K+F M RN V+SW+
Sbjct: 160 ELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVHMYF-AYKLFGEMSVRNDVVSWS 218
Query: 230 TMIS-----MNREDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
MI E +F+ M + G+ P+ VT + ++ A + + G M+HGL I
Sbjct: 219 VMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIF 278
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ V N LI MY++ ++ + K F E+ + IISWN ++S Y N L A+
Sbjct: 279 RGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALAL 338
Query: 344 FFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
+++E ++ + T +VL D SLK + H II+ G +S+ ++ ++++D Y
Sbjct: 339 LGTMVREGAEKDEVTLANVLQIAKHFLD-SLK-CRSVHGVIIRKGYESNELLLNSVIDAY 396
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K + ++ VF+ +K AW+ +I+ AR+G + ++ FK+M N+ V P++++ +
Sbjct: 397 AKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQM-NEEVIPNNVSIM 455
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+++ C + + + + ++ + + ++DM + G +E + QIP
Sbjct: 456 NLMEACAVSAELRQSKWAHGIAVRR-GLASEVAIGTSIIDMYSKCGDIEASIRAFNQIP- 513
Query: 523 GPGLSVLQSLLGACRIHG 540
+ +++ A RI+G
Sbjct: 514 QKNVVCWSAMISAFRING 531
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 160/352 (45%), Gaps = 22/352 (6%)
Query: 142 EAILALIEMMRKGLRL-DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EA+ E+ G +L D S AC + + LG +HG IK G + S+ N
Sbjct: 30 EALQLYHEIRISGAQLSDTWVLPSILKACSN-TSFNLGTAMHGCLIKQGCQSSTSIANST 88
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPND 255
+ Y K A + F +++ +SW M+ N + + F + R PN
Sbjct: 89 IDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNI 148
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
+ + +I A + +G HG ++ F + SV N L+++YA M + K+F E
Sbjct: 149 SSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVH-MYFAYKLFGE 207
Query: 316 LSCR-EIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDIS 372
+S R +++SW+ +I G+ Q G F ++ E+ P+ T SVL A +DIS
Sbjct: 208 MSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDIS 267
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L G H +I GL+ D VG++L+DMY K ++ + + F E EK+ +W ++SA
Sbjct: 268 L--GTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSA 325
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+ + + M +G D +T +VL + +H DS+
Sbjct: 326 YILNESHLEALALLGTMVREGAEKDEVTLANVLQI---------AKHFLDSL 368
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 133/299 (44%), Gaps = 21/299 (7%)
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S N ++A+ L+ E+R+ G +D + I G +HG IK S S+
Sbjct: 25 SGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAMHGCLIKQGCQSSTSI 84
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF-GVIKES 351
N I Y ++ + +++ FD ++ +SWN ++ G NG +A + F G
Sbjct: 85 ANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHF 144
Query: 352 KPNAYTFGSVLNAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+PN S+L + A ++ + G H +I + G + V ++LL +Y + F
Sbjct: 145 QPN---ISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVHMYF- 200
Query: 411 SQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENK-GVRPDSITFLSVLTVC 468
+ ++F E +++ +W+ +I + G+ E F+ M + G+ PD +T +SVL C
Sbjct: 201 AYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKAC 260
Query: 469 GR------NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
M+H G +F + D + S ++DM + + A + +IP
Sbjct: 261 TNLKDISLGTMVH-GLVIFRGLEDDLFVGNS------LIDMYSKCFNVHSAFKAFKEIP 312
>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Glycine max]
Length = 715
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 184/640 (28%), Positives = 337/640 (52%), Gaps = 24/640 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD-----DALSFALRMNLIGVVF 55
++MY + G + +F+ + IVS+N +L+ + ++ AL +M G+
Sbjct: 55 LSMYARCGSLTDSHLVFDKMPRRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRP 114
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T+++ L E + FG LH+ K GL+ ++ + +L+ MYS G L A VF
Sbjct: 115 SSTTFTSLLQASSLLEHWWFGSSLHAKGFKLGLN-DICLQTSLLNMYSNCGDLSSAELVF 173
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+M ++D V+WN+++ GY ++ E I I+MM G ++ ++C K+
Sbjct: 174 WDMVDRDHVAWNSLIMGYLKNNKIE-EGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDY 232
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
G+ IH I + + N L+ Y A ++F RM + +++SW +MI+
Sbjct: 233 RSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGY 292
Query: 234 ---MNREDAVSLFKEMRLDGVC---PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ E A++LF ++L +C P+D T+ G+I A + G+ +H IKT F
Sbjct: 293 SENEDGEKAMNLF--VQLQEMCFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFE 350
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
V + L++MY + + +VF +S ++++ W +I+GY++ + A++ FF +
Sbjct: 351 RSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQM 410
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ E + + Y V+NA A L+ G+ H + +K+G D + V +L+DMY K G
Sbjct: 411 VHEGHEVDDYVLSGVVNA--CANLAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNG 468
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
S+ + VF++ E W +++ + HG E + F+E+ +G+ PD +TFLS+L+
Sbjct: 469 SLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLS 528
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG-GPG 525
C + ++ +G+ L++ M + P HYSCMV + R LEEAEE++ + P
Sbjct: 529 ACSHSRLVEQGKFLWNYM-NSIGLIPGLKHYSCMVTLFSRAALLEEAEEIINKSPYIEDN 587
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
L + ++LL AC I+ N ++G A+ +++++ + VL+SNLYA W+ VA +R+
Sbjct: 588 LELWRTLLSACVINKNFKVGIHAAEEVLRLKAEDGPTLVLLSNLYAAARKWDKVAEIRRN 647
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
M+ + K G SW + + +H FSSGD +HP+++E++
Sbjct: 648 MRGLMLDKYPGLSWIEAK--NDIHVFSSGDQSHPKADEVH 685
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 237/489 (48%), Gaps = 18/489 (3%)
Query: 78 QLHSLIVKFGL---DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
QLH+LI+ +V N +++MY+R G L ++ VFD+MP + VS+NA+L+ Y+
Sbjct: 31 QLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKMPRRTIVSYNALLAAYS 90
Query: 135 Q-DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
+ ++ + A+ +M+ GLR +FTS A ++ G +H K+G
Sbjct: 91 RASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWFGSSLHAKGFKLGLND- 149
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRL 248
+ + L++ YS C A VF M DR+ ++W ++I + E+ + LF +M
Sbjct: 150 ICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWLFIKMMS 209
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
G P T+ ++++ S + GR+IH I N + + N L+ MY +MQ
Sbjct: 210 VGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQT 269
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVG 366
+ ++F + +++SWN++I+GY++N A+ F + + KP+ YT+ +++A G
Sbjct: 270 AYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAGIISATG 329
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
S +G+ H+ +IK G + VGS L+ MY K + RVF K W
Sbjct: 330 VFPSSS--YGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLW 387
Query: 427 TAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
T +I+ ++ D + F +M ++G D V+ C ++ +G + +K
Sbjct: 388 TEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVK 447
Query: 487 -DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
Y +E S ++DM + G LE A + Q+ P L S+LG HG VE
Sbjct: 448 LGYDVEMSVS--GSLIDMYAKNGSLEAAYLVFSQV-SEPDLKCWNSMLGGYSHHGMVEEA 504
Query: 546 ERIADALMK 554
++ + ++K
Sbjct: 505 LQVFEEILK 513
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 150/309 (48%), Gaps = 24/309 (7%)
Query: 259 IGLIHAISIGNLVKEGRMIHGLCIKTN--FLSE-PSVCNCLITMYARFESMQDSEKVFDE 315
+ L+ S ++E R +H L + T F S+ P V N +++MYAR S+ DS VFD+
Sbjct: 14 LSLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDK 73
Query: 316 LSCREIISWNALISGY--AQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
+ R I+S+NAL++ Y A +++A++ + ++ +P++ TF S+L A E
Sbjct: 74 MPRRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWW 133
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
G H+ K+GL+ D + ++LL+MY G + ++ VF + ++ AW ++I
Sbjct: 134 F--GSSLHAKGFKLGLN-DICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMG 190
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-----D 487
++ E + F +M + G P T+ VL C R GR + ++ D
Sbjct: 191 YLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLD 250
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGER 547
H++ + +VDM G ++ A + ++ P L S++ + E GE+
Sbjct: 251 LHLQ------NALVDMYCNAGNMQTAYRIFSRME-NPDLVSWNSMIAG---YSENEDGEK 300
Query: 548 IADALMKME 556
+ ++++
Sbjct: 301 AMNLFVQLQ 309
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 183/609 (30%), Positives = 315/609 (51%), Gaps = 15/609 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVL-----SGFEKSDDALSFALRMNLIGVVF 55
++ Y G A + + +PD ++ L +G A+ +R
Sbjct: 67 LSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPAEQE 126
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D V S AL + F +G +LH +VK G +++V N L+ MY++ G L AR+VF
Sbjct: 127 DVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKVF 185
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D +P+++ VSW ++LSG Q+G E ++ EM ++ + + S AC +L
Sbjct: 186 DRIPDRNVVSWTSMLSGCLQNG-LAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSL 244
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G+ IHG +K G ++ + ++ Y KC DA +VF + +++ WTTMI
Sbjct: 245 HQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGY 304
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ DA+ LF + + + PN VT ++ A + + GR IHG+ +K +
Sbjct: 305 TQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVEND 364
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
V N L+ MYA+ +++ D++ +F + +++++WN+LI+GYA+N + A+ F + ++
Sbjct: 365 VVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQ 424
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
S P+A + + L+A D+ + G+ H++ +K S+ V +ALL++Y K +
Sbjct: 425 GSLPDAISVVNALSACVCLGDLLI--GKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLP 482
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+QRVF+E +++ W A+I GD ++ F EM ++P+ F S+L+ C
Sbjct: 483 SAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCS 542
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
GM+ G+ F+SM ++I PS HY+CMVD+L R G LEEA E + ++P S+
Sbjct: 543 HTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIW 602
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
Q+ L C++H +E E + +M + P V+MSNLY G W+ +RK MK +
Sbjct: 603 QAFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVMMSNLYTSYGRWDKSLAIRKLMKER 662
Query: 590 GVRKEVGFS 598
G+ K G S
Sbjct: 663 GLVKLPGCS 671
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 205/398 (51%), Gaps = 12/398 (3%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH+ ++ GL + L++ Y+ G L ARRV DE P+ D+ ++ L + G
Sbjct: 47 LHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGR 106
Query: 139 YGVEAILALIEMMRK--GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
+ EA+ +M R+ + D V + A A + G+++H +K G G + V
Sbjct: 107 HA-EAVAVHRDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-GGDLFV 164
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFKEMRLDGV 251
N L+ Y+K +A KVF R+ DRNV+SWT+M+S ++ ++ LF EMR + +
Sbjct: 165 MNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESI 224
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P++ T ++ A ++ + +GR+IHG +K +S + ++ MY + +D+ +
Sbjct: 225 LPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQ 284
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFF-GVIKESKPNAYTFGSVLNAVGAAED 370
VFDELS +++ W +I GY QNG L A+ F PN+ T +VL+A +
Sbjct: 285 VFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRN 344
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+SL G+ H +K+G + +V +AL+DMY K ++ +++ +F K W ++I
Sbjct: 345 LSL--GRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLI 402
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ A + + F M +G PD+I+ ++ L+ C
Sbjct: 403 AGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSAC 440
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 192/640 (30%), Positives = 331/640 (51%), Gaps = 28/640 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFALRMNLI--GVVFDAVT 59
MY + G + A+ +F+ + + IV W ++S + + A + AL ++ G+ DA+
Sbjct: 71 MYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIV 130
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ + LS C E G +H V+ GL + V +AL++MY R G L +A +F +
Sbjct: 131 FVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLE 190
Query: 120 NK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
D V WNA+++ +Q+G EA+ M++ G+ D V+F S AC +L
Sbjct: 191 RHLDVVLWNAMITANSQNGS-PREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRAS 249
Query: 179 --KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
K H + G G+ V V L++ Y++C A K F M +RN +SWT+MI+
Sbjct: 250 QVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFT 309
Query: 237 ED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ AV F M L+GV P T L A+ ++ R++ + + +++ ++
Sbjct: 310 QIGHLLAVETFHAMLLEGVVPTRST---LFAALEGCEDLRVARLVEAIAQEIGVVTDVAI 366
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNA-----LISGYAQNGLSLAAVQAFFGV 347
L+ YAR + +D+ +VF S RE W+A +I+ YAQ + + +
Sbjct: 367 VTDLVMAYARCDGQEDAIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAA 423
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKR 405
I+ P+ + + L+A A +L G++ H+ + LD D +G+A++ MYG+
Sbjct: 424 IERGISPDRILYITALDAC--ASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQC 481
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GS+ +++ F+ + E +W A++SA A+HG E + F+ M +G + I FL++L
Sbjct: 482 GSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLL 541
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ G F +M D+ + P+ +HY CMVD+LGR GRL +A +V +P P
Sbjct: 542 SACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPD 601
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ +L+GACRI+G+ E G A+ ++++ + +YV + N+Y+ G W+ A +RK
Sbjct: 602 AATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKI 661
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
M G+RK G S ++ +H F D +HP+SE IY
Sbjct: 662 MADLGLRKIPGVSSIEIR--SKVHEFVVRDRSHPQSEAIY 699
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 219/461 (47%), Gaps = 17/461 (3%)
Query: 93 YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR 152
Y+ ++L+ MY R G L A VF ++ +K V W ++S Y G + AI +++
Sbjct: 63 YLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRG-HSAAAIALFHRILQ 121
Query: 153 KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD 212
+G+ LD + F S SAC E+ L G+ IH +++ G G V + L+S Y +C D
Sbjct: 122 EGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRD 181
Query: 213 ANKVFRRMHDR-NVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
AN +F + +V+ W MI+ N + +A+ +F M G+ P+ VTF+ + A S
Sbjct: 182 ANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACS 241
Query: 267 IGNLVKEGRM--IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
++ ++ H +T S+ V L+ YAR + + K F E+ R +SW
Sbjct: 242 SSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSW 301
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII 384
++I+ + Q G L AV+ F ++ E T ++ A+ ED L+ + +
Sbjct: 302 TSMIAAFTQIG-HLLAVETFHAMLLEGVVP--TRSTLFAALEGCED--LRVARLVEAIAQ 356
Query: 385 KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW--TAIISALARHGDYESV 442
++G+ +D + + L+ Y + ++ RVF+ +E A TA+I+ A+ D S
Sbjct: 357 EIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRST 416
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
+ +G+ PD I +++ L C + +GR + + D ++ + +V
Sbjct: 417 FKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVS 476
Query: 503 MLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
M G+ G L +A + +P +S ++L A HG VE
Sbjct: 477 MYGQCGSLRDARDAFDGMPARDEIS-WNAMLSASAQHGRVE 516
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 127/286 (44%), Gaps = 18/286 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFAL--RMNLIGVVFDAV 58
+N Y + G+ D A F + + VSW ++++ F + L+ M L GVV
Sbjct: 274 VNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHLLAVETFHAMLLEGVVPTRS 333
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD-- 116
T AL C E + ++ + G+ ++V + L+ Y+R +A RVF
Sbjct: 334 TLFAALEGC---EDLRVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAR 390
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAIL--ALIEMMRKGLRLDHVSFTSAASACGHEKN 174
E D+ A+++ Y Q D L A IE +G+ D + + +A AC
Sbjct: 391 EEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIE---RGISPDRILYITALDACASLAA 447
Query: 175 LELGKQIHG-VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L G+QIH V+ V++GN ++S Y +C DA F M R+ ISW M+S
Sbjct: 448 LSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLS 507
Query: 234 MNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
+ ED LF+ M +G + F+ L+ A + LVK G
Sbjct: 508 ASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAG 553
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D + S+L+ MY + GS+ + VF++ KS WT +ISA G + + F +
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+G+ D+I F+SVL+ C + GR L + + S +V M GR G L
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGR-LIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179
Query: 511 EEAEELVGQI 520
+A L G +
Sbjct: 180 RDANALFGHL 189
>gi|302788234|ref|XP_002975886.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
gi|300156162|gb|EFJ22791.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
Length = 679
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/578 (33%), Positives = 317/578 (54%), Gaps = 17/578 (2%)
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V +++ L C G ++H+ IV GL ++++GN LI MY + G + EAR VF++
Sbjct: 1 VAFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEK 60
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ + + SW+ I+ G D A+ M +G+RLD V + SAC +L+
Sbjct: 61 IESPNIFSWSIII-GACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDH 119
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMIS--- 233
G+ + MG+ H V N L++ Y K +A K F+ M D++V+SWT MIS
Sbjct: 120 GRALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFA 179
Query: 234 -MNRED-AVSLFKEMRLDGVCPNDVTFIGLI--HAISIGNLVKEGRMIHGLCIKTNFLSE 289
ED A+ F++M +GV PN+VTF+ ++ A S NL+ G+ +H L + L
Sbjct: 180 LHGCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAG-LDS 238
Query: 290 PSVCNCLITMYARFESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
V N L+ MY + + ++ +VF+ CR +I+W+ +I+ Y+ NG A+ + +
Sbjct: 239 SIVRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMD 298
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
E +P+ YTF S+L+A A D +L G+ H + GL+ ++ +AL++MYG+ G
Sbjct: 299 LEGLEPDEYTFTSLLDACSIAGD-TLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQ 357
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ RVF + + AWTA+I+A A+HG+ ++ ++ M +GV+ D+I FLSVL
Sbjct: 358 LEDALRVFEKMNHWNLVAWTALIAAFAQHGNVHAIDLSWR-MHLEGVQADNIVFLSVLHA 416
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C ++ G F M+ D+ + HYSCMVD+L R GR+ EAEEL+ +P P
Sbjct: 417 CSHAVVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHM 476
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+++LL ACR+ G+ G R+A + P + YVLMS+ YA W+ VA +++ M
Sbjct: 477 EMKTLLAACRVSGDTPRGARVARLASGLIPHDAAPYVLMSHAYAAVEKWDEVAEVQERMA 536
Query: 588 SKGVRKEVGFSWADVGDIDGLHGFSSGD-NTHPRSEEI 624
GV+K G+S +V + +H F +G+ + H + EI
Sbjct: 537 KLGVKKPRGWSCVEVK--NRVHQFFAGNFSWHSEAAEI 572
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 229/453 (50%), Gaps = 19/453 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+ MY K G ++A +F + +P+I SW+ ++ + AL M+ GV D
Sbjct: 42 IQMYGKCGAMEEARAVFEKIESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDM 101
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V +S C G L + I G V N+L+ MY + G + AR+ F +
Sbjct: 102 VVLINPVSACSSLGSLDHGRALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQD 161
Query: 118 MPNKDS-VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS--AASACGHEKN 174
M S VSW A++SG+ G + A+ +M+ +G+R + V+F S A AC +
Sbjct: 162 MAGDQSVVSWTAMISGFALHGCEDL-ALDFFRKMVAEGVRPNEVTFVSILALEACSNLNL 220
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMI- 232
L GK++H + + G + + V N L++ Y KC +A +VF R D RN+I+W+TMI
Sbjct: 221 LAAGKKLHELILDAGLDSSI-VRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIA 279
Query: 233 --SMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISI-GNLVKEGRMIHGLCIKTNFL 287
S+N + A+SL+K+M L+G+ P++ TF L+ A SI G+ + EGR +H
Sbjct: 280 AYSLNGDGRQALSLYKKMDLEGLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLE 339
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + LI MY R+ ++D+ +VF++++ +++W ALI+ +AQ+G A ++
Sbjct: 340 KKMVLATALINMYGRYGQLEDALRVFEKMNHWNLVAWTALIAAFAQHGNVHAIDLSWRMH 399
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRG 406
++ + + F SVL+A A + L+ G C ++ G+ S ++D+ + G
Sbjct: 400 LEGVQADNIVFLSVLHACSHA--VVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLLARCG 457
Query: 407 SIFESQRVFNETQ-EKSEFAWTAIISALARHGD 438
+ E++ + + E + +++A GD
Sbjct: 458 RVAEAEELLHSMPFEPAHMEMKTLLAACRVSGD 490
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 184/566 (32%), Positives = 297/566 (52%), Gaps = 44/566 (7%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+HS I+ L +G L+ Y+ + AR+VFDE+P ++ + N ++ Y +G
Sbjct: 62 VHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGF 121
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
Y E I M ++ DH +F AC N+ +GK+IHG + K+G + + VGN
Sbjct: 122 YR-EGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGN 180
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCP 253
L+S Y KC +A V M R+V+SW ++++ +DA+ + +EM +
Sbjct: 181 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISH 240
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+ T L+ A+S N E MY + +F
Sbjct: 241 DAGTMASLLPAVS--NTTTEN-----------------------VMYVK--------DMF 267
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
++ + ++SWN +I Y +N + + AV+ + G+ + +P+A + SVL A G +S
Sbjct: 268 FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALS 327
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L G++ H +I + L + ++ +AL+DMY K G + ++ VF + + +WTA+ISA
Sbjct: 328 L--GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISA 385
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP 492
G + F +M++ G+ PDSI F++ L C G++ +GR F M Y I P
Sbjct: 386 YGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 445
Query: 493 SPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADAL 552
+H +CMVD+LGR G+++EA + + ++P P V +LLGACR+H N ++G AD L
Sbjct: 446 RLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKL 505
Query: 553 MKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFS 612
++ P SG YVL+SN+YA+ G WE V +R MKSKG++K G S +V I +H F
Sbjct: 506 FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRI--IHTFL 563
Query: 613 SGDNTHPRSEEIYRMAECLGSEMKYL 638
GD +HP+S EIYR + L +MK L
Sbjct: 564 VGDRSHPQSAEIYRELDVLVKKMKEL 589
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 171/387 (44%), Gaps = 51/387 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++MY K G +A + + ++ D+VSWN++++G+ ++ DDAL M + + DA
Sbjct: 183 VSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDA 242
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++ L + ++ +YV + +F +
Sbjct: 243 GTMASLL----------------PAVSNTTTENVMYVKD-----------------MFFK 269
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K VSWN ++ Y ++ VEA+ M G D VS TS ACG L L
Sbjct: 270 MGKKSLVSWNVMIGVYMKNA-MPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSL 328
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK+IHG + ++ + N L+ Y+KC A VF M R+V+SWT MIS
Sbjct: 329 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGF 388
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
DAV+LF +M+ G+ P+ + F+ + A S L++EGR L + ++ P +
Sbjct: 389 SGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL-MTDHYKITPRL 447
Query: 293 --CNCLITMYARFESMQDSEKVFDELSCR--EIISWNALISG---YAQNGLSLAAVQAFF 345
C++ + R ++++ K E+ E + W AL+ ++ + L A F
Sbjct: 448 EHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERV-WGALLGACRVHSNTDIGLLAADKLF 506
Query: 346 GVIKESKPNAYTFGSVLNAVGAAEDIS 372
+ E ++ G E+++
Sbjct: 507 QLAPEQSGYYVLLSNIYAKAGRWEEVT 533
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 170/391 (43%), Gaps = 46/391 (11%)
Query: 217 FRRMHDRNVISWTTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
FR+ R V S + ++++++ P + F+ L + +K R
Sbjct: 16 FRKFQTRKVTSSVPKLELDQKNS-------------PKETAFM-LGQVLDTYPDLKTLRT 61
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
+H I + S+ L+ YA + + + KVFDE+ R +I N +I Y NG
Sbjct: 62 VHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGF 121
Query: 337 SLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
+Q F + KP+ YTF VL A + +I + G++ H KVGL S VG
Sbjct: 122 YREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVI--GKKIHGSATKVGLSSTLFVG 179
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+ L+ MYGK G + E++ V +E + +W ++++ A++ ++ + +EME+ +
Sbjct: 180 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKIS 239
Query: 456 PDSITFLSVLTVCGRNGM--IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
D+ T S+L + + +F M K + ++ M+ + + EA
Sbjct: 240 HDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVS-----WNVMIGVYMKNAMPVEA 294
Query: 514 EELVGQIPGG---PGLSVLQSLLGAC----------RIHGNVEMGERIADALMKMEPAGS 560
EL + P + S+L AC +IHG +E + I + L++
Sbjct: 295 VELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA---- 350
Query: 561 GSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
+ ++YA+ G + + + MKS+ V
Sbjct: 351 -----LIDMYAKCGCLDRARDVFENMKSRDV 376
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 192/568 (33%), Positives = 296/568 (52%), Gaps = 54/568 (9%)
Query: 104 RWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFT 163
R+ L AR +FD+MP +D VSWNA+LSGY Q+G Y EA EM K + +S+
Sbjct: 42 RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNG-YVKEAKEIFDEMPCK----NSISWN 96
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
+A +E +++ + + N +M Y K DA +F RM +R
Sbjct: 97 GMLAAYVQNGRIEDARRL----FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPER 152
Query: 224 NVISWTTMISMNREDAVSLFKEMRLDGVCP-NDV-TFIGLIHAISIGNLVKEGRMIHGLC 281
+ +SW TMIS ++ L + RL P DV T+ ++ ++ E R +
Sbjct: 153 DEVSWNTMISGYAQNG-ELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM 211
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
+ N +S N +I Y + + M + ++F+ + C+ + SWN +I+GYAQNG +A
Sbjct: 212 PEKNSVS----WNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNG-DIAQA 266
Query: 342 QAFFGVIKE---------------------------------SKPNAYTFGSVLNAVGAA 368
+ FF + + + N TF S L+ A
Sbjct: 267 RNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLST--CA 324
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
E +L+ G++ H ++K GL+S VG+ALL MY K G+I ++ VF +EK +W
Sbjct: 325 EIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNT 384
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+I+ ARHG + + F+ M+ G+ PD +T + VL+ C G++ KG F SM +DY
Sbjct: 385 MIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDY 444
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
I + HY+CM+D+LGR GRL++A+ L+ +P P + +LLGA RIHGN E+GE+
Sbjct: 445 GITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKA 504
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL 608
A + +MEP SG YVL+SNLYA G W V +R M+ +GV+K G+SW +V + +
Sbjct: 505 AKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQ--NKI 562
Query: 609 HGFSSGDNTHPRSEEIYRMAECLGSEMK 636
H F+ GD+ HP + IY E L +MK
Sbjct: 563 HTFTVGDSVHPERDRIYTFLEELDLKMK 590
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 178/362 (49%), Gaps = 36/362 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
M Y K + A IF+ + D VSWNT++SG+ ++ + L A R+ V D T+
Sbjct: 130 MGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLE-AQRLFEESPVRDVFTW 188
Query: 61 STALS-----FCLDHEGFLF-------GLQLHSLIVKF----GLD-----------SEVY 93
+ +S LD +F + +++I + +D V
Sbjct: 189 TAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVS 248
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
N +IT Y++ G + +AR FD MP +DS+SW AI++GY Q G YG EA+ +EM R
Sbjct: 249 SWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSG-YGEEALHLFVEMKRD 307
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDA 213
G RL+ +FTS S C LELGKQ+HG +K G + VGN L+ Y KC DA
Sbjct: 308 GERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDA 367
Query: 214 NKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIG 268
VF + ++ V+SW TMI+ ++A+ LF+ M+ G+ P+DVT +G++ A S
Sbjct: 368 YIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHT 427
Query: 269 NLVKEG-RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNA 326
LV +G + + + C+I + R + D++ + + + +W A
Sbjct: 428 GLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGA 487
Query: 327 LI 328
L+
Sbjct: 488 LL 489
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 212/468 (45%), Gaps = 57/468 (12%)
Query: 13 ALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
A +F+ + D+VSWN +LSG+ ++ + +FD + ++S+ G
Sbjct: 49 ARLLFDQMPERDVVSWNAMLSGYAQNG-------YVKEAKEIFDEMPCKNSISW----NG 97
Query: 73 FLFG------LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSW 126
L ++ + + D E+ N ++ Y + RLV+AR +FD MP +D VSW
Sbjct: 98 MLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSW 157
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI----- 181
N ++SGY Q+G+ +L + + D ++T+ S L+ +++
Sbjct: 158 NTMISGYAQNGE-----LLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP 212
Query: 182 --HGVS---IKMGY-----------------GTHVSVGNVLMSTYSKCEVTGDANKVFRR 219
+ VS I GY +VS N +++ Y++ A F R
Sbjct: 213 EKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDR 272
Query: 220 MHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
M R+ ISW +I S E+A+ LF EM+ DG N TF + + ++ G
Sbjct: 273 MPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELG 332
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
+ +HG +K S V N L+ MY + ++ D+ VF+ + +E++SWN +I+GYA++
Sbjct: 333 KQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARH 392
Query: 335 GLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
G A+ F + K P+ T VL+A + K + +S G+ ++
Sbjct: 393 GFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVD-KGTEYFYSMTQDYGITANSK 451
Query: 394 VGSALLDMYGKRGSIFESQRVF-NETQEKSEFAWTAIISALARHGDYE 440
+ ++D+ G+ G + ++Q + N E W A++ A HG+ E
Sbjct: 452 HYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTE 499
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 128/260 (49%), Gaps = 16/260 (6%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y ++G +A F+ + D +SW +++G+ +S ++AL + M G + T+
Sbjct: 257 YAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTF 316
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
++ LS C + G Q+H +VK GL+S YVGNAL+ MY + G + +A VF+ +
Sbjct: 317 TSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE 376
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
K+ VSWN +++GY + G +G EA++ M + G+ D V+ SAC H ++ G +
Sbjct: 377 KEVVSWNTMIAGYARHG-FGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTE 435
Query: 181 IHGVSIKMGYGTHVSVGN--VLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMISMNR- 236
+ S+ YG + + ++ + DA + + M + + +W ++ +R
Sbjct: 436 -YFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 494
Query: 237 -------EDAVSLFKEMRLD 249
E A + EM D
Sbjct: 495 HGNTELGEKAAKMIFEMEPD 514
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MYCK G D A +F + ++VSWNT+++G+ + +AL M G++ D VT
Sbjct: 357 MYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVT 416
Query: 60 YSTALSFCLDHEGFL-FGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
LS C H G + G + +S+ +G+ + +I + R GRL +A+ +
Sbjct: 417 MVGVLSAC-SHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKN 475
Query: 118 MP-NKDSVSWNAILS-----GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
MP D+ +W A+L G T+ G+ + I + E G+ + + +A+ G
Sbjct: 476 MPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM-EPDNSGMYVLLSNLYAASGRWGD 534
Query: 172 EKNLELGKQIHGVSIKMGY 190
+ L + GV GY
Sbjct: 535 VGRMRLRMRDRGVKKVPGY 553
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 336/641 (52%), Gaps = 50/641 (7%)
Query: 13 ALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTYSTALSFCLD 69
+L +FN L+ P ++W +V+ + +L + M G+ D + + L C
Sbjct: 61 SLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAM 120
Query: 70 HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE-------ARRVFDEMPNKD 122
G LH I++ GLD ++Y GNAL+ MYS+ L + A +V DEM +
Sbjct: 121 LMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERT 180
Query: 123 -SVSWNAILSGYTQDGDYGVEAILALI-----EMMRKGLRLDHVSFTSAASACGHEKNLE 176
SV ++L G +EA + E + L +D+ S +
Sbjct: 181 RSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDY----KPRSEYREMEACN 236
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
LG+QI +S M SV +V K+F M +++++SW T+I+ N
Sbjct: 237 LGQQIKDISHSM------SVDSV--------------RKIFEMMPEKDLVSWNTIIAGNA 276
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +++ +EM + P+ T ++ I+ + +G+ IHG I+ +E
Sbjct: 277 RNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVY 336
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KE 350
V + LI MYA+ + DS +VF L+ R+ ISWN++I+G QNGL ++ F ++ +
Sbjct: 337 VASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAK 396
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KP +Y+F S++ A A +L G++ H +I + G D + + S+L+DMY K G+I
Sbjct: 397 IKPKSYSFSSIMPA--CAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRT 454
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++++F+ + + +WTA+I A HG + F++M+ +G+ P+ + F++VLT C
Sbjct: 455 ARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSH 514
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ + F+SM D+ I P +HY+ + D+LGR GRLEEA + + +P GP SV
Sbjct: 515 AGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWA 574
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL ACR+H NV+M E++A+ +++++P +G+Y+L++N+Y+ W+ A R ++ G
Sbjct: 575 TLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTG 634
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
+RK SW +V + ++ F +GD +HP E+I E L
Sbjct: 635 IRKTPACSWIEVR--NKVYAFMAGDESHPCYEKIREAMEVL 673
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 227/482 (47%), Gaps = 46/482 (9%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLH+ ++KF S + L+++YS L ++ R+F+ + +++W +++ YT G
Sbjct: 29 QLHAQVLKFQASSLC-NLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHG 87
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+++ + I M+ GL DH F S AC +L LG+ +HG I++G + G
Sbjct: 88 -LPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTG 146
Query: 198 NVLMSTYSKCEVTGD-------ANKVFRRMHDRN-VISWTTMISMNREDAVSLFKEMRLD 249
N LM+ YSK A++V M +R + +++ N+ VS + D
Sbjct: 147 NALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYD 206
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF-----LSEPSVCNC--LITMYAR 302
C R ++ ++ E CN I +
Sbjct: 207 VSC--------------------RSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISH 246
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGL---SLAAVQAFFGVIKESKPNAYTFG 359
S+ K+F+ + ++++SWN +I+G A+NGL +L V+ G KP+++T
Sbjct: 247 SMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGA--NLKPDSFTLS 304
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
SVL + AE++ + G+ H I+ GLD++ V S+L+DMY K + +S RVF
Sbjct: 305 SVLPLI--AENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLT 362
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
E+ +W +II+ ++G ++ + F++M ++P S +F S++ C +H G+
Sbjct: 363 ERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQ 422
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIH 539
L + ++ + + S +VDM + G + A ++ ++ +S ++G C +H
Sbjct: 423 LHGYITRN-GFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMG-CALH 480
Query: 540 GN 541
G+
Sbjct: 481 GH 482
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/593 (32%), Positives = 303/593 (51%), Gaps = 48/593 (8%)
Query: 80 HSLIVKFGLDSEVYVGNALITM---YSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
H+ +VK GL + Y + L+ + + L A VF+ + + WN +L G
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
D V + + M+ G + +F +C K E G+QIH +K+G
Sbjct: 62 SDL-VSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120
Query: 197 GNVLMSTYSK---------------------CE--VTG--------DANKVFRRMHDRNV 225
L+S Y++ C +TG A KVF + +R+V
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180
Query: 226 ISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+SW MI+ E+A+ LFKEM V P++ T + ++ A + ++ GR IH L
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240
Query: 281 CIKTN-FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
+ F S + N I +Y++ ++ + +F+ LSC++++SWN LI GY L
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 300
Query: 340 AVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK--VGLDSDPIVGS 396
A+ F +++ + PN T SVL A I + G+ H +I K G+ + + +
Sbjct: 301 ALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDI--GRWIHVYIDKRLKGVTNGSALRT 358
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
+L+DMY K G I + +VFN KS +W A+I A HG + + F M G+ P
Sbjct: 359 SLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEP 418
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
D IT + +L+ C +G++ GRH+F S+ +DY+I P +HY CM+D+LG G +EAEE+
Sbjct: 419 DDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEI 478
Query: 517 VGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDW 576
+ +P P + SLL AC++HGN+E+ E A LM++EP SGSYVL+SN+YA G W
Sbjct: 479 IHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRW 538
Query: 577 EMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
E VA +R+ + KG++K G S ++ + +H F GD HP+S EIYRM E
Sbjct: 539 EDVARIREVLNGKGMKKVPGCSSIEIDSV--VHEFIIGDKLHPQSREIYRMLE 589
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 230/486 (47%), Gaps = 59/486 (12%)
Query: 7 SGQFD---KALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTY 60
S FD A+ +F P+++ WNT+L G S D L +RM G V +A T+
Sbjct: 27 SPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTF 86
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA--------- 111
L C + F G Q+H+ ++K G + + Y +LI+MY+R GRL +A
Sbjct: 87 PFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQ 146
Query: 112 ----------------------RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
R+VFD + +D VSWNA+++GY ++ Y EA+ E
Sbjct: 147 RDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYE-EALELFKE 205
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG-VSIKMGYGTHVSVGNVLMSTYSKCE 208
MMR +R D + S SAC ++ELG++IH V G+G+ + + N + YSKC
Sbjct: 206 MMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCG 265
Query: 209 VTGDANKVFRRMHDRNVISWTTMIS----MN-REDAVSLFKEMRLDGVCPNDVTFIGLIH 263
A+ +F + ++V+SW T+I MN ++A+ LF+EM G PNDVT + ++
Sbjct: 266 DVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLP 325
Query: 264 AISIGNLVKEGRMIHGLCIK--TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
A + + GR IH K + ++ LI MYA+ ++ + +VF+ + + +
Sbjct: 326 ACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSL 385
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
SWNA+I G+A +G + AA F + K +P+ T +L+A + + L
Sbjct: 386 SSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGR----- 440
Query: 381 SHIIKVGLDSDPIVGS-----ALLDMYGKRGSIFESQRVFN-ETQEKSEFAWTAIISALA 434
HI K I ++D+ G G E++ + + E W +++ A
Sbjct: 441 -HIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACK 499
Query: 435 RHGDYE 440
HG+ E
Sbjct: 500 MHGNLE 505
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 179/385 (46%), Gaps = 17/385 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y G A +F+ + D+VSWN +++G+ ++ ++AL M V D T
Sbjct: 159 YASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTL 218
Query: 61 STALSFCLDHEGFLFGLQLHSLIV-KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ LS C G ++H+L+ G S + + NA I +YS+ G + A +F+ +
Sbjct: 219 VSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLS 278
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
KD VSWN ++ GYT Y EA+L EM+R G + V+ S AC H +++G+
Sbjct: 279 CKDVVSWNTLIGGYTHMNLYK-EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGR 337
Query: 180 QIHGVSIK--MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
IH K G ++ L+ Y+KC A++VF M +++ SW MI +M
Sbjct: 338 WIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAM 397
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI-HGLCIKTNFLSEPS 291
+ A LF MR +G+ P+D+T +GL+ A S L+ GR I + N +
Sbjct: 398 HGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLE 457
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNG---LSLAAVQAFFGV 347
C+I + +++E++ + + + W +L+ +G L+ + Q +
Sbjct: 458 HYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEI 517
Query: 348 IKESKPNAYTFGSVLNAVGAAEDIS 372
E+ + ++ G ED++
Sbjct: 518 EPENSGSYVLLSNIYATAGRWEDVA 542
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 8/187 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ +Y K G + A +F L+ D+VSWNT++ G+ + +AL M G +
Sbjct: 258 IGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 317
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKF--GLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT + L C G +H I K G+ + + +LI MY++ G + A +VF
Sbjct: 318 VTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVF 377
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKN 174
+ M +K SWNA++ G+ G A L MRK G+ D ++ SAC H
Sbjct: 378 NSMMHKSLSSWNAMIFGFAMHGR--ANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGL 435
Query: 175 LELGKQI 181
L+LG+ I
Sbjct: 436 LDLGRHI 442
>gi|297611068|ref|NP_001065556.2| Os11g0109800 [Oryza sativa Japonica Group]
gi|77548352|gb|ABA91149.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125533131|gb|EAY79679.1| hypothetical protein OsI_34825 [Oryza sativa Indica Group]
gi|125575946|gb|EAZ17168.1| hypothetical protein OsJ_32674 [Oryza sativa Japonica Group]
gi|255679705|dbj|BAF27401.2| Os11g0109800 [Oryza sativa Japonica Group]
Length = 748
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 321/610 (52%), Gaps = 18/610 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVT 59
MY K G+ A F ++ N D+ WN +L G+ + A+ L M+ G+ D T
Sbjct: 139 MYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVLNGFGHHAIRTVLLMHHSGLAPDRYT 198
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y +A+ C + G QLH L++ L+S V N+L+ MY R + A VF ++
Sbjct: 199 YISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIR 258
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAIL-ALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
KD+VSWN ++SG+ D D +A+ LI+M R G + + V+F+ G ++N LG
Sbjct: 259 QKDTVSWNTMISGFAHDEDD--KAVFGCLIDMSRIGCKPNEVTFSVLLRLSGAKENESLG 316
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----- 233
QI ++ + GY +V V N +++ S+C + A F + N+++W MI+
Sbjct: 317 LQIVALAYRHGYTDNVLVANAVINMLSRCGLLNRAYGFFCSLTSTNIVTWNEMIAGYGLF 376
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ E+ + LF+ + G P++ T+ ++ A ++ IH +K F S V
Sbjct: 377 SHSEETMKLFRSLVCFGERPDEFTYSAVLSAFQEAQGARDHEQIHATILKQGFASCQFVS 436
Query: 294 NCLITM-YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVIKE 350
LI A F S+Q S K+ ++ E++SW +IS + ++GL+ + F F
Sbjct: 437 TSLIKANVAAFGSVQISLKIIEDAGKMELVSWGVVISAFLKHGLNDEVIFLFNLFRGDST 496
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+KP+ + +VLNA A I +H + HS ++K G V SA++D Y K G I
Sbjct: 497 NKPDEFILATVLNACANAALI--RHCRCIHSLVLKTGHSKHFCVASAVVDAYAKCGEITS 554
Query: 411 SQRVFNETQEKSEFA--WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ F ++ A + +++A A HG +N ++EM + P TF+++L+ C
Sbjct: 555 AESAFTVVSSGTDDAILYNTMLTAYANHGLIHEALNLYEEMTKAKLSPTPATFVAILSAC 614
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ +G+ +F +ML Y + P+ +Y+C+VD+L R G L+EA+ ++ +P P +V
Sbjct: 615 SHLGLVEQGKLVFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAV 674
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+SL+ CRIHGN ++G A+ +++M P+ G+Y+ +SN+YA+ G+W+ R+ M
Sbjct: 675 WRSLVIGCRIHGNKQLGVLAAEQILRMAPSSDGAYISLSNVYADDGEWQSAEETRRRMVQ 734
Query: 589 KGVRKEVGFS 598
V+K G+S
Sbjct: 735 NHVQKLQGYS 744
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 267/579 (46%), Gaps = 31/579 (5%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLS---GFEKSDDALSFALRMNLIGVVFDAVTY 60
Y + G D AL +F+ + ++VSW ++S G F + M G + +
Sbjct: 34 YARRGLLDSALKVFDEMPQRNLVSWTAMVSASTGNGAPHLGFRFFVSMIRSGFCPNEFSL 93
Query: 61 STALSFC---LDHEG--FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T L+ C + H L L LH + V+ GLDS +VG++L+ MY++ GR+ A+R F
Sbjct: 94 ATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAF 153
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ NKD WNA+L GY +G +G AI ++ M GL D ++ SA AC
Sbjct: 154 AHIRNKDLTCWNAMLEGYVLNG-FGHHAIRTVLLMHHSGLAPDRYTYISAVKACSISAQW 212
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
+LG+Q+H + I ++ SV N L+ Y + A VFR++ ++ +SW TMIS
Sbjct: 213 DLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMISGF 272
Query: 234 MNREDAVSLFK---EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ ED ++F +M G PN+VTF L+ G I L + +
Sbjct: 273 AHDEDDKAVFGCLIDMSRIGCKPNEVTFSVLLRLSGAKENESLGLQIVALAYRHGYTDNV 332
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK- 349
V N +I M +R + + F L+ I++WN +I+GY S ++ F ++
Sbjct: 333 LVANAVINMLSRCGLLNRAYGFFCSLTSTNIVTWNEMIAGYGLFSHSEETMKLFRSLVCF 392
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM-YGKRGSI 408
+P+ +T+ +VL+A A+ + ++ H+ I+K G S V ++L+ GS+
Sbjct: 393 GERPDEFTYSAVLSAFQEAQGA--RDHEQIHATILKQGFASCQFVSTSLIKANVAAFGSV 450
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV-RPDSITFLSVLTV 467
S ++ + + +W +ISA +HG + V+ F +PD +VL
Sbjct: 451 QISLKIIEDAGKMELVSWGVVISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNA 510
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHY---SCMVDMLGRVGRLEEAEELVGQIPGGP 524
C +I R + +LK H H+ S +VD + G + AE + G
Sbjct: 511 CANAALIRHCRCIHSLVLKTGH----SKHFCVASAVVDAYAKCGEITSAESAFTVVSSGT 566
Query: 525 GLSVL-QSLLGACRIHGNVE----MGERIADALMKMEPA 558
++L ++L A HG + + E + A + PA
Sbjct: 567 DDAILYNTMLTAYANHGLIHEALNLYEEMTKAKLSPTPA 605
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 186/397 (46%), Gaps = 22/397 (5%)
Query: 85 KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAI 144
K G + + N L+ Y+R G L A +VFDEMP ++ VSW A++S T +G +
Sbjct: 17 KLGTLAHTFNMNHLLIYYARRGLLDSALKVFDEMPQRNLVSWTAMVSASTGNGAPHL-GF 75
Query: 145 LALIEMMRKGLRLDHVSFTSAASAC----GHEKN-LELGKQIHGVSIKMGYGTHVSVGNV 199
+ M+R G + S + +AC H N L + +HGV+++ G ++ VG+
Sbjct: 76 RFFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSS 135
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MN--REDAVSLFKEMRLDGVCPN 254
L+ Y+K A + F + ++++ W M+ +N A+ M G+ P+
Sbjct: 136 LLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVLNGFGHHAIRTVLLMHHSGLAPD 195
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
T+I + A SI GR +H L I + S SV N L+ MY R + + VF
Sbjct: 196 RYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFR 255
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-----SKPNAYTFGSVLNAVGAAE 369
++ ++ +SWN +ISG+A + +A FG + + KPN TF +L GA E
Sbjct: 256 KIRQKDTVSWNTMISGFAHDEDD----KAVFGCLIDMSRIGCKPNEVTFSVLLRLSGAKE 311
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
+ SL G + + + G + +V +A+++M + G + + F + W +
Sbjct: 312 NESL--GLQIVALAYRHGYTDNVLVANAVINMLSRCGLLNRAYGFFCSLTSTNIVTWNEM 369
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I+ E M F+ + G RPD T+ +VL+
Sbjct: 370 IAGYGLFSHSEETMKLFRSLVCFGERPDEFTYSAVLS 406
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 208/462 (45%), Gaps = 32/462 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFA--LRMNLIGVVFDA 57
++MY ++ Q + A +F + D VSWNT++SGF DD F + M+ IG +
Sbjct: 238 VDMYFRARQKETAASVFRKIRQKDTVSWNTMISGFAHDEDDKAVFGCLIDMSRIGCKPNE 297
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT+S L E GLQ+ +L + G V V NA+I M SR G L A F
Sbjct: 298 VTFSVLLRLSGAKENESLGLQIVALAYRHGYTDNVLVANAVINMLSRCGLLNRAYGFFCS 357
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ + + V+WN +++GY + E + ++ G R D ++++ SA +
Sbjct: 358 LTSTNIVTWNEMIAGYGL-FSHSEETMKLFRSLVCFGERPDEFTYSAVLSAFQEAQGARD 416
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLM--------STYSKCEVTGDANKVFRRMHDRNVISWT 229
+QIH +K G+ + V L+ S ++ DA K+ ++SW
Sbjct: 417 HEQIHATILKQGFASCQFVSTSLIKANVAAFGSVQISLKIIEDAGKM-------ELVSWG 469
Query: 230 TMISMN-----REDAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
+IS ++ + LF R D P++ +++A + L++ R IH L +K
Sbjct: 470 VVISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLK 529
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELS--CREIISWNALISGYAQNGLSLAAV 341
T V + ++ YA+ + +E F +S + I +N +++ YA +GL A+
Sbjct: 530 TGHSKHFCVASAVVDAYAKCGEITSAESAFTVVSSGTDDAILYNTMLTAYANHGLIHEAL 589
Query: 342 QAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALL 399
+ + K P TF ++L+A + + G+ S ++ G+ + L+
Sbjct: 590 NLYEEMTKAKLSPTPATFVAILSACSHLGLV--EQGKLVFSTMLSAYGMHPARANYACLV 647
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
D+ ++G + E++ V + + A W +++ HG+ +
Sbjct: 648 DLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVIGCRIHGNKQ 689
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
LL Y +RG + + +VF+E +++ +WTA++SA +G F M G P+
Sbjct: 30 LLIYYARRGLLDSALKVFDEMPQRNLVSWTAMVSASTGNGAPHLGFRFFVSMIRSGFCPN 89
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH-------IEPSPDHYSCMVDMLGRVGRL 510
+ ++LT C + + H L ++ H ++ +P S ++ M + GR+
Sbjct: 90 EFSLATMLTAC-HSMVAHSSNKLLIAL--SLHGVAVRAGLDSNPFVGSSLLLMYAKHGRI 146
Query: 511 EEAEELVGQI 520
A+ I
Sbjct: 147 AAAQRAFAHI 156
>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
Length = 916
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 193/618 (31%), Positives = 315/618 (50%), Gaps = 33/618 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVF----- 55
+ Y + G + A +F + +N ++V+WN ++ G ++D R+N +F
Sbjct: 309 ITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVEND-------RVNEAMCMFQEMRS 361
Query: 56 ----DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVE 110
D T T +S C DH G ++H I+K G + E VGN+L+ +Y +
Sbjct: 362 KNQPDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPST 421
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
AR +F MP +D +SWN ++SGY+++ G EA ++ +GL + + +C
Sbjct: 422 ARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCF 481
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD----RNVI 226
++L GK +H +K G+ T VS N L+ Y C GD+ F + ++I
Sbjct: 482 CPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICC---GDSLAAFSLLESITPISDII 538
Query: 227 SWTTMISMNRE-----DAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
SW T I + DA+ F+ M + P+ +T + ++ L G+ IH +
Sbjct: 539 SWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCM 598
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+K V N L+TMY RF + +E +F L R + SWN +ISG+AQN L A
Sbjct: 599 ALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRA 658
Query: 341 VQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
Q F+ +++ +PN + ++ A D L+ G+ H H+++ GL ++ + ++L+D
Sbjct: 659 FQ-FYKKMEDFEPNEISIVGIICACTQLGD--LRQGKNIHGHVVRFGLQTNVFISASLVD 715
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K G + S RVF + EKS W ++ISA HG + F +M N GV+ T
Sbjct: 716 MYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRST 775
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
F+++L+ C +G+ +G + M++ + I P+P+H+ C+VDMLGR GRL+EA + V +
Sbjct: 776 FIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDMLGRAGRLQEAHKFVESL 835
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVA 580
P V +LL AC ++M E +A L+ +EP SG YV MSNLYA + W
Sbjct: 836 PSKQAHGVWGALLSACSKKSELKMCESVAKHLLCLEPENSGYYVTMSNLYAYQDMWSGAV 895
Query: 581 ILRKGMKSKGVRKEVGFS 598
+R ++ KG+ K G S
Sbjct: 896 QVRDILQDKGLMKPRGRS 913
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/526 (28%), Positives = 253/526 (48%), Gaps = 22/526 (4%)
Query: 13 ALCIFNNLNNPDIVSWNTVLSGF----EKSDDALSFALRMNLIGVVFDAVTYSTALSFCL 68
AL +F+ PD++ WN +S D + F ++++GV+ D+ + LS
Sbjct: 117 ALQVFDEAAAPDLILWNAAISALTLNCRYGDAVVLFRWMVDVLGVI-DSTSMVIMLSGAS 175
Query: 69 DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
G+ H + +K LD+++ + N L+ MY++ G + VF MP +D+ SWN+
Sbjct: 176 RARSLEHGIAFHGMALKRCLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNS 235
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL-ELGKQIHGVSIK 187
++SG +G + A EM+R + D VS + SAC H K+L G+ +H IK
Sbjct: 236 MVSGSLFNGLAEISAYY-FKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIK 294
Query: 188 MGY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVS 241
+GY T SV N L++ Y + A +VF ++N+++W MI E +A+
Sbjct: 295 LGYEDTTSSVANSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMC 354
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT-NFLSEPSVCNCLITMY 300
+F+EMR P+ T + +I A L+ EG+ +HG IK + E SV N L+ +Y
Sbjct: 355 MFQEMRSKNQ-PDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLY 413
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQN-GLSLAAVQAFFGVIKES-KPNAYTF 358
+ + +F + R++ISWN +ISGY++N L A F G++ E T
Sbjct: 414 MKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTV 473
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
+V+ + +D L G+ HS I+K G + ++L+ MY G + +
Sbjct: 474 VAVIPSCFCPQD--LNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESI 531
Query: 419 QEKSE-FAWTAIISALARHGDYESVMNQFKEMENK-GVRPDSITFLSVLTVCGRNGMIHK 476
S+ +W I ++G Y + F+ M + + PDSIT +SVL+VCG +
Sbjct: 532 TPISDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSL 591
Query: 477 GRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
G+ + LK IE + + ++ M R G E AE + + G
Sbjct: 592 GKSIHCMALKRL-IEFNLRVKNALLTMYFRFGDTESAELIFSSLVG 636
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 164/580 (28%), Positives = 278/580 (47%), Gaps = 38/580 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG--FEKSDDALSFALR-MNLIGVVFDA 57
M+MY K G F + +F + D SWN+++SG F + ++ + M D
Sbjct: 206 MDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADE 265
Query: 58 VTYSTALSFCLD-HEGFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVF 115
V+ S LS C + F FG +HS ++K G D+ V N+LIT Y G A VF
Sbjct: 266 VSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAEEVF 325
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
NK+ V+WNA++ G ++ V + + + MR + D + + SACG L
Sbjct: 326 LSTSNKNLVTWNAMIKGLVENDR--VNEAMCMFQEMRSKNQPDVATLVTIISACGDHGLL 383
Query: 176 ELGKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
GK++HG IK G+ SVGN L+ Y KC A +FR M R++ISW TMIS
Sbjct: 384 PEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISG 443
Query: 234 MNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+R E+A ++FK + +G+ T + +I + + G+ +H +K FL+
Sbjct: 444 YSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLT 503
Query: 289 EPSVCNCLITMY-------ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
S N LI MY A F ++ + D IISWN I G QNGL A+
Sbjct: 504 GVSAANSLIHMYICCGDSLAAFSLLESITPISD------IISWNTAIVGCVQNGLYGDAL 557
Query: 342 QA--FFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
+A F P++ T SVL+ G + SL G+ H +K ++ + V +ALL
Sbjct: 558 EAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSL--GKSIHCMALKRLIEFNLRVKNALL 615
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
MY + G ++ +F+ ++ +W +IS A++ + +K+ME+ P+ I
Sbjct: 616 TMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRAFQFYKKMED--FEPNEI 673
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
+ + ++ C + G + +G+++ +++ + ++ + + +VDM + GRL+ + V +
Sbjct: 674 SIVGIICACTQLGDLRQGKNIHGHVVR-FGLQTNVFISASLVDMYSKCGRLDISIR-VFE 731
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
++ S++ A HG +G + + KM +G
Sbjct: 732 SSAEKSIACWNSMISAFGFHG---LGLKSIEIFWKMNNSG 768
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 202/417 (48%), Gaps = 12/417 (2%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH +K G + V ++IT YSR + A +VFDE D + WNA +S T +
Sbjct: 85 LHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
YG +A++ M+ +D S S ++LE G HG+++K T +S+ N
Sbjct: 145 YG-DAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWN 203
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLFKEMRLDGVCP 253
LM Y+KC + VF+RM R+ SW +M+S + E + FKEM
Sbjct: 204 TLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQA 263
Query: 254 NDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFL-SEPSVCNCLITMYARFESMQDSEK 311
++V+ ++ A S + +L G +H IK + + SV N LIT Y + +E+
Sbjct: 264 DEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAEE 323
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDI 371
VF S + +++WNA+I G +N A+ F + +++P+ T ++++A G +
Sbjct: 324 VFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKNQPDVATLVTIISACG--DHG 381
Query: 372 SLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
L G+ H +IIK G + + VG++LLD+Y K ++ +F + +W +I
Sbjct: 382 LLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMI 441
Query: 431 SALARHGDY-ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
S +R+ E FK + ++G+ T ++V+ C ++ G+ + +LK
Sbjct: 442 SGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILK 498
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 162/394 (41%), Gaps = 63/394 (15%)
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
+H +K+ + +P V +IT Y+R + + +VFDE + ++I WNA IS N
Sbjct: 85 LHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144
Query: 337 SLAAVQAF------FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
AV F GVI + V+ GA+ SL+HG H +K LD+
Sbjct: 145 YGDAVVLFRWMVDVLGVIDSTS-------MVIMLSGASRARSLEHGIAFHGMALKRCLDT 197
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D + + L+DMY K G + S+ VF + +W +++S +G E FKEM
Sbjct: 198 DLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMV 257
Query: 451 NKGVRPDSITFLSVLTVCGR-NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
+ D ++ VL+ C + G + S++K + + + + ++ +G
Sbjct: 258 RSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGF 317
Query: 510 LEEAEELV------------GQIPG---------------------GPGLSVLQSLLGAC 536
E AEE+ I G P ++ L +++ AC
Sbjct: 318 PEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKNQPDVATLVTIISAC 377
Query: 537 RIHGNVEMGERIADALMK----MEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
HG + G+ + ++K E G+ +L +LY + D IL + M + +
Sbjct: 378 GDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLL--DLYMKCNDPSTARILFRTMPMRDL- 434
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
SW + + G+S D+ ++ +++
Sbjct: 435 ----ISWNTM-----ISGYSRNDSLGEEAKAMFK 459
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/559 (32%), Positives = 307/559 (54%), Gaps = 14/559 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN--KDSVSWNAILSGYTQ 135
Q+HS ++ L S ++ N L+ +Y++ G + + +F P+ K+ VSW ++++ T+
Sbjct: 48 QIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTR 107
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+A+ M R G+ +H +F++ SAC G+Q+H + K G+ V
Sbjct: 108 -FKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVF 166
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNR--EDAVSLFKEMRLDG 250
V + L+ Y+KC A KVF M RN++SW TMI N+ + A+ FK + L+
Sbjct: 167 VVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLEN 226
Query: 251 VCP-NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
+ ++V+F + A + ++ G+ +HG+ +K + + N L MY + D
Sbjct: 227 LTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDV 286
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAA 368
K+F R++++WN +I Y N A +F+ + ++ S P+ ++ SVL++ A
Sbjct: 287 AKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHS--CA 344
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+L G H+ II+ G + V S+L+ MY K GS+ ++ ++F ET++++ WTA
Sbjct: 345 NLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTA 404
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
II+A +HG V+ F++M +G++PD ITF+SVL+ C G + +G F+SM+K +
Sbjct: 405 IIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVH 464
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
I P +HY+C+VD+L R G L+ A+ + +P P SV +LL ACR H N+ MG+ +
Sbjct: 465 GIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEV 524
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGL 608
A L +EP G+YVL+ N+ G +R+ M+S GVRKE G SW D+ +
Sbjct: 525 ALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIK--NST 582
Query: 609 HGFSSGDNTHPRSEEIYRM 627
+ F+ D +H +++EIY M
Sbjct: 583 YVFTVHDKSHEKTKEIYEM 601
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 160/529 (30%), Positives = 283/529 (53%), Gaps = 52/529 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNL--NNPDIVSWN---TVLSGFEKSDDALSFALRMNLIGVVF 55
+N+Y K G D+ L +F++ ++ ++VSW T L+ F++ AL+F M GV
Sbjct: 69 LNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYP 128
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T+S LS C D + G Q+HSL+ K G +EV+V +AL+ MY++ ++ A +VF
Sbjct: 129 NHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVF 188
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKN 174
+EMP ++ VSWN ++ G+ Q+ Y +AI ++ + L LD VSF+S SAC + N
Sbjct: 189 EEMPVRNLVSWNTMIVGFLQNKLYD-QAIFFFKTLLLENLTALDEVSFSSVFSACANAGN 247
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
LE GKQ+HGV++K+G V + N L Y KC + D K+F R+V++W MI
Sbjct: 248 LEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMA 307
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ N EDA + F MR G P++ ++ ++H+ + + +G +IH I++ F+
Sbjct: 308 YVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKN 367
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + LITMYA+ S+ D+ ++F+E R ++ W A+I+ Q+G + V+ F +++
Sbjct: 368 LRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLR 427
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E KP+ TF SVL+A H+ ++ G ++++ ++G I
Sbjct: 428 EGIKPDYITFVSVLSACS-------------HTGRVEEGF----FYFNSMIKVHG----I 466
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ + I+ L+R G+ + +F E+ ++PD+ + ++L+ C
Sbjct: 467 YPGHE-----------HYACIVDLLSRAGELDRA-KRFIEL--MPIKPDASVWGALLSAC 512
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVGRLEEAEEL 516
+ + G+ + LK + +EP +P +Y + ++L R G L EA+E+
Sbjct: 513 RNHSNLIMGKEV---ALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEV 558
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 8/220 (3%)
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS--CREIISWNALIS 329
K IH I T LS P + N L+ +YA+ S+ + +F + ++SW +LI+
Sbjct: 44 KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLIT 103
Query: 330 GYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
+ A+ FF ++ S PN YTF +VL+A + + HG++ HS + K G
Sbjct: 104 QLTRFKRPFKAL-TFFNHMRRSGVYPNHYTFSAVLSA--CTDTTASVHGEQMHSLVWKHG 160
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
++ V SAL+DMY K + +++VF E ++ +W +I ++ Y+ + FK
Sbjct: 161 FLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFK 220
Query: 448 EMENKGVRP-DSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
+ + + D ++F SV + C G + G+ + LK
Sbjct: 221 TLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALK 260
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE--FAWTAIIS 431
KH + HS +I L S P + + LL++Y K GS+ ++ +F+ + S+ +WT++I+
Sbjct: 44 KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLIT 103
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
L R + F M GV P+ TF +VL+ C G + S++ +
Sbjct: 104 QLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQM-HSLVWKHGFL 162
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
S +VDM + + AE++ ++P
Sbjct: 163 AEVFVVSALVDMYAKCCDMLMAEKVFEEMP 192
>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
Length = 807
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 199/647 (30%), Positives = 341/647 (52%), Gaps = 49/647 (7%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
+MY K G D A +F+ + + + V+WN ++ G+ ++ ++A+ M G+ V
Sbjct: 192 DMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRV 251
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T ST LS + G G Q H++ + GL+ + +G +++ Y + G + A +FD M
Sbjct: 252 TVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGM 311
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLEL 177
KD V+WN ++SGY Q G VE + + ++MR+ L+ D V+ ++ SA +NL+L
Sbjct: 312 IEKDVVTWNLLISGYVQQG--LVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKL 369
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GK+I I+ G + + + + + Y+KC +A KVF +++I W T++S +
Sbjct: 370 GKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYAD 429
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF EM+L+ V PN +T+ +I ++ V E + +
Sbjct: 430 SGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEM--------------- 474
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
F MQ S +F L ISW +++G QNG S A+ F ++ES
Sbjct: 475 ----------FLQMQSS-GIFPNL-----ISWTTMMNGLVQNGCSEEAI-LFLRKMQESG 517
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS-DPIVGSALLDMYGKRGSIF 409
+PNA+T L+A SL G+ H +II+ S + ++L+DMY K G I
Sbjct: 518 LRPNAFTITVALSA--CVNLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDIN 575
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++RVF + A+ISA A +G + ++ +E+ GV+PD+IT S+L+ C
Sbjct: 576 KAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSACN 635
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+++ +F M+ + ++P +HY MVD+L G ++A L+ ++P P ++
Sbjct: 636 YGRDVNQAIEVFRDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMV 695
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
QSL +C E+ E ++ L++ EP SG+YV++SN YA +G W+ VA +R+ MK K
Sbjct: 696 QSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMISNAYAVEGSWDEVAKMREMMKVK 755
Query: 590 GVRKEVGFSWADV-GDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
G++K+ G SW + G+ +G+H F + D TH R++EI RM L +M
Sbjct: 756 GLKKKPGCSWIQIKGEEEGVHVFVANDKTHLRNDEIQRMLALLLYDM 802
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/549 (26%), Positives = 265/549 (48%), Gaps = 17/549 (3%)
Query: 40 DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNA 97
+ALS M+ + Y L C+ G Q+H+ I+K G Y+
Sbjct: 29 EALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYARNEYIETK 88
Query: 98 LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL 157
L+ Y++ L A+ +F ++ ++ SW AI+ + G G A++ +EM+ G+
Sbjct: 89 LVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIG-LGEGALMGFVEMLENGIFP 147
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
D+ + ACG + G+ +HG K G V V + L Y KC V DA KVF
Sbjct: 148 DNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVF 207
Query: 218 RRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
+ DRN ++W ++ + E+A+ L EMR +G+ P VT + A + ++
Sbjct: 208 DYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIE 267
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
EG+ H + I + + ++ Y + ++ +E +FD + +++++WN LISGY
Sbjct: 268 EGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYV 327
Query: 333 QNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
Q GL A+ + +E+ K + T ++++A + ++ LK G+ + I+ GL+SD
Sbjct: 328 QQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQN--LKLGKEIQCYCIRHGLESD 385
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
++ S +DMY K GSI +++VF+ T +K W ++SA A G + F EM+
Sbjct: 386 IVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQL 445
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
+ V P+ IT+ ++ RNG +++ + +F M + I P+ ++ M++ L + G E
Sbjct: 446 ESVPPNVITWNLIILSLLRNGQVNEAKEMFLQM-QSSGIFPNLISWTTMMNGLVQNGCSE 504
Query: 512 EAEELVGQIPGG---PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMS- 567
EA + ++ P + L AC ++ G I +++ + + + S
Sbjct: 505 EAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQYSFSASIETSL 564
Query: 568 -NLYAEKGD 575
++YA+ GD
Sbjct: 565 VDMYAKCGD 573
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 180/389 (46%), Gaps = 56/389 (14%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N YCK G + A IF+ + D+V+WN ++SG+ + ++A+ M + FD
Sbjct: 292 LNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDC 351
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT ST +S + G ++ ++ GL+S++ + + + MY++ G +V A++VFD
Sbjct: 352 VTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDS 411
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
KD + WN +LS Y G G EA+ EM
Sbjct: 412 TVQKDLILWNTLLSAYADSGLSG-EALRLFYEM--------------------------- 443
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR----NVISWTTMIS 233
Q+ V +V N+++ + + +A ++F +M N+ISWTTM
Sbjct: 444 --QLESVP------PNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTM-- 493
Query: 234 MN-------REDAVSLFKEMRLDGVCPNDVTF-IGLIHAISIGNLVKEGRMIHGLCIKTN 285
MN E+A+ ++M+ G+ PN T + L +++ +L GR IHG I+
Sbjct: 494 MNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASL-HFGRSIHGYIIRNQ 552
Query: 286 FLS-EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
S S+ L+ MYA+ + +E+VF C E+ +NA+IS YA G A+ +
Sbjct: 553 QYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLY 612
Query: 345 FGVIKES-KPNAYTFGSVLNAVGAAEDIS 372
+ KP+ T S+L+A D++
Sbjct: 613 RSLEDGGVKPDNITITSLLSACNYGRDVN 641
>gi|357483095|ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513169|gb|AES94792.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 985
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 187/639 (29%), Positives = 334/639 (52%), Gaps = 23/639 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD-----ALSFALRMNLIGVVF 55
++MY + G + A +F+ + VS+N +L+ + + + A + +M +G+
Sbjct: 324 ISMYSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMGLRP 383
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+T ++ L H L GL LH+ +KFG +++ V +L+ MYS L A VF
Sbjct: 384 SNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVF 443
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+M +D+V+WN+++ GY ++ D + + IEMM G +F SAC K+
Sbjct: 444 CDMNERDNVAWNSLILGYLKN-DKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDY 502
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
G+ IH I + + N L+ Y T A +F RM +++SW +MIS
Sbjct: 503 FSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGY 562
Query: 234 ---MNREDAVSLFKEMRLDGVC---PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ E A++LF ++L +C P+D T+ G+I A G+ +HG IK F+
Sbjct: 563 FENEDGEKAMNLF--VQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFV 620
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
V + L++MY + + + + +VF + ++ I W +I+GY++ + A++ F +
Sbjct: 621 RSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEM 680
Query: 348 IKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
E + + Y VL+ A L+ G+ H + K+G D + V +L+DMY K G
Sbjct: 681 HHEVHEIDDYVLSGVLSV--CAYLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNG 738
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
++ + VF++ W +++ + HG + + F+E+ +G+ PD +TFLS+L+
Sbjct: 739 NLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSLLS 798
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG-GPG 525
C + ++ +G+ L++ M + P P HYSCMV +L R LEEAEE++ + P
Sbjct: 799 ACSHSRLVEQGKLLWNYM-SSIGLVPGPKHYSCMVTLLSRAALLEEAEEIINKSPYVEDN 857
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ + ++LL AC I+ N+++G R A+ +++ + +L+SNLYA G W+ VA +R+
Sbjct: 858 VELWRTLLSACVINKNLKVGVRAAEEVLRFNAEDGPTLILLSNLYAAAGRWDEVAEIRRN 917
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
MK + KE G SW + + +H FSSGD +HP+ +++
Sbjct: 918 MKGLIMEKEPGLSWIEAK--NDIHVFSSGDQSHPKVDQV 954
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/515 (28%), Positives = 241/515 (46%), Gaps = 19/515 (3%)
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDS---EVYVGNALITMYSRWGRLV 109
+ F +T + L C QLH+L++ S ++ N +I+MYSR G L
Sbjct: 275 LCFSVITDTLLLKKCRITTSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLE 334
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGD-YGVEAILALIEMMRKGLRLDHVSFTSAASA 168
+A +VFD+MP + VS+NA+L+ Y++ + + V A +M GLR +++ TS A
Sbjct: 335 DAHQVFDKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMGLRPSNMTITSLLQA 394
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
+L +G +H S+K G+ + V L++ YS C A VF M++R+ ++W
Sbjct: 395 ASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAW 454
Query: 229 TTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
++I + E V LF EM G P TF ++ A S GR+IH I
Sbjct: 455 NSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSGRLIHARVIV 514
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
N + + N L+ MY Q + +F + +++SWN++ISGY +N A+
Sbjct: 515 GNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNL 574
Query: 344 F--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
F + KP+ YT+ +++A GA S +G+ H +IK G VGS L+ M
Sbjct: 575 FVQLKALCFPKPDDYTYAGIISATGAFPCFS--YGKPLHGQVIKAGFVRSVFVGSTLVSM 632
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
Y K + RVF K WT +I+ ++ D + F EM ++ D
Sbjct: 633 YFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVL 692
Query: 462 LSVLTVCGRNGMIHKGR--HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
VL+VC ++ +G H + L Y +E S ++DM + G LE A + Q
Sbjct: 693 SGVLSVCAYLAILRQGEIIHCYAYKL-GYDVEMSVS--GSLIDMYAKNGNLEAAYLVFSQ 749
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
+ P L S+LG HG V+ ++ + ++K
Sbjct: 750 V-SHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIK 783
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 207/658 (31%), Positives = 332/658 (50%), Gaps = 51/658 (7%)
Query: 24 DIVSWNTVLSG------FEKSDDALSFALRMNLIGVV-FDAVTYSTALSFCLDHEGFLFG 76
D VS+N+++S +E++ DAL L V F V+ A S +G G
Sbjct: 132 DAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLG 191
Query: 77 LQLHSLIVKFG-LDS--EVYVGNALITMYSRWGRLVEARRVFDEMPNK------DSVSWN 127
+ H+ +K G LD E + NAL++MY+R G + +A+ +F D V+WN
Sbjct: 192 REAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWN 251
Query: 128 AILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
++S Q G EA+ L +M+ G+R D V+F SA AC + L LG+++H V +K
Sbjct: 252 TMISLLVQGGRCA-EAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLK 310
Query: 188 -MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD--RNVISWTTMI-----SMNREDA 239
+ V + L+ Y+ E A +VF + + R + W MI + E+A
Sbjct: 311 DADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEA 370
Query: 240 VSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLIT 298
+ LF M + C P++ T G++ A + +HG +K V N L+
Sbjct: 371 LELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMD 430
Query: 299 MYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF------------- 345
MYAR M + ++F + R+++SWN LI+G G + A Q
Sbjct: 431 MYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSS 490
Query: 346 ----GVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
G PN T ++L G A + G+ H + ++ L+SD VGSAL+DM
Sbjct: 491 TTEEGEAHRCMPNNITLMTLLP--GCAALAAPARGKEIHGYAVRHALESDIAVGSALVDM 548
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSIT 460
Y K G + S+ VF+ ++ W +I A HG + + F EM G P+ +T
Sbjct: 549 YAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVT 608
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
F++ L C +G++ +G LF M +D+ ++P+PD ++C+VD+LGR GRL+EA ++ +
Sbjct: 609 FIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSM 668
Query: 521 -PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMV 579
PG +S SLLGACR+H NVE+GE A+ L ++EP + YVL+ N+Y+ G W+
Sbjct: 669 EPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKS 728
Query: 580 AILRKGMKSKGVRKEVGFSWADVGDIDG-LHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+R M+ +GV KE G SW ++DG +H F +G+++HP S E++ + L M+
Sbjct: 729 VAVRVRMRRQGVAKEPGCSWI---ELDGAIHRFMAGESSHPASAEVHAHMDALWERMR 783
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 221/470 (47%), Gaps = 47/470 (10%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPN--KDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
VGNAL+T Y+R G L A +F +D+VS+N+++S + A+ AL +M+
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWE-RALDALRDML 160
Query: 152 RKGLRLDHVSFT--SAASACGH---EKNLELGKQIHGVSIKMGY---GTHVSVGNVLMST 203
+G R D SFT S AC H + LG++ H ++K G+ G N L+S
Sbjct: 161 AEG-RHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSM 219
Query: 204 YSKCEVTGDANKVFRRMHDR------NVISWTTMISMNRE-----DAVSLFKEMRLDGVC 252
Y++ + DA +FR +V++W TMIS+ + +AV + +M GV
Sbjct: 220 YARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVR 279
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS-VCNCLITMYARFESMQDSEK 311
P+ VTF + A S ++ GR +H + +K L+ S V + L+ MYA E + + +
Sbjct: 280 PDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARR 339
Query: 312 VFDEL--SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGA 367
VFD + R++ WNA+I GYAQ G+ A++ F + E+ P+ T VL A
Sbjct: 340 VFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACAR 399
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
+E + K H +++K G+ + V +AL+DMY + G + ++R+F + +W
Sbjct: 400 SEGFAGKEAM--HGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWN 457
Query: 428 AIISALARHGDYESVMNQFKEM----------------ENKGVRPDSITFLSVLTVCGRN 471
+I+ G EM E P++IT +++L C
Sbjct: 458 TLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAAL 517
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+G+ + ++ + +E S +VDM + G L + + ++P
Sbjct: 518 AAPARGKEIHGYAVR-HALESDIAVGSALVDMYAKCGCLAASRAVFDRLP 566
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 183/416 (43%), Gaps = 35/416 (8%)
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG--YGTHVSVGNVLMSTYSKC--EVTG 211
+LDH + A + ++ + +H +++ + +VGN L++ Y++C
Sbjct: 60 QLDHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAA 119
Query: 212 DANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHA-I 265
A R+ +S+ ++IS E A+ ++M +G +DV+ L+ +
Sbjct: 120 LALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEG--RHDVSSFTLVSVLL 177
Query: 266 SIGNLVKE-----GRMIHGLCIKTNFLSEPS---VCNCLITMYARFESMQDSEKVFDELS 317
+ +L + GR H +K FL E N L++MYAR + D++ +F +
Sbjct: 178 ACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTA 237
Query: 318 CR------EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAED 370
++++WN +IS Q G AV+ + ++ +P+ TF S L A E
Sbjct: 238 AAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEM 297
Query: 371 ISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF--AWT 427
++L G+ H+ ++K L ++ V SAL+DMY + ++RVF+ E S W
Sbjct: 298 LAL--GREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWN 355
Query: 428 AIISALARHGDYESVMNQFKEMENK-GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
A+I A+ G E + F ME + G P T VL C R+ G+ +
Sbjct: 356 AMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGF-AGKEAMHGYVV 414
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
+ + + ++DM R+G ++ A + I +S +L+ C + G+
Sbjct: 415 KRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVS-WNTLITGCVVQGHA 469
>gi|302767314|ref|XP_002967077.1| hypothetical protein SELMODRAFT_87452 [Selaginella moellendorffii]
gi|300165068|gb|EFJ31676.1| hypothetical protein SELMODRAFT_87452 [Selaginella moellendorffii]
Length = 653
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 300/591 (50%), Gaps = 27/591 (4%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD----ALSFALRMNLIGVVFDA 57
+MY K G+ D++ IF+ + + ++ SW +++ F +S D AL M+ GV +A
Sbjct: 64 DMYGKCGRPDESRKIFDAIADKNVFSWTILIAAFSESVDRRWEALHLLRFMDQSGVAPNA 123
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L C + + LH+ I GLD E+ VG AL+ Y + G + A+ F +
Sbjct: 124 ATFVSVLVACSELRCLDAVIALHARIASLGLDLEIVVGTALVNAYGKCGSVDRAKNAFAK 183
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP K+S+ W A+++ Q+G +G A+ M+ +GL+ D V+F SA AC
Sbjct: 184 MPIKNSICWTAVITANAQNGHFG-PAMELYERMVLEGLKPDRVTFVSALDACASSPRSPP 242
Query: 178 GKQIHGVSIKM----------GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
+ V+ ++ G+G+ V L++ Y K A ++F + +RN +
Sbjct: 243 PRYRAVVAQRIASLAAAVAASGHGSSPIVAAALLNMYGKLGELDRAREIFHSLPERNAVM 302
Query: 228 WTTMISMNRE-----DAVSLFKEMRLDGVC-PNDVTFIGLIHAISIGNLVKE-GRMIHGL 280
W MI+ + + +A+ F M LDG P+ TF +I A + G + + IH
Sbjct: 303 WNVMIAASSQAGAIHEALGFFWAMNLDGAARPDGSTFTSIISACAAGGVPPDLAVRIHAA 362
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+ + + + L+ +YA+ D+ +VF E+ + ++ W AL+S A +G S A
Sbjct: 363 LLSSGVTLDDPLLTALLGLYAKCGRTDDARRVFSEIREKGVVPWTALVSALAADGRSSDA 422
Query: 341 VQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
V A + E +PN YTF + A+ AA + + HG+ H+ GLDSDP V + ++
Sbjct: 423 VAALRRMELEGVRPNEYTF---VAAIEAASQLGIAHGRSLHARATSAGLDSDPFVANTVM 479
Query: 400 DMYGKRGSIFESQRVFNET-QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
MY GSI E++ VF+ ++ +W +I ALARHG + + EME GV P +
Sbjct: 480 AMYASCGSIAEARAVFDGMGHRRNLVSWNCMIEALARHGHSLESLALYSEMELDGVPPSA 539
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
TF+SVL C G + G H F + +DY I+ +H C+VD+LGR G L+ AE +
Sbjct: 540 ATFVSVLAACSHVGEVELGYHYFVAFRRDYGIQAEAEHIGCVVDLLGRAGWLDSAESFIQ 599
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNL 569
+P S LLGAC+ HG+ G R+A + ++ + SYV +SNL
Sbjct: 600 SLPAADLSSSWAVLLGACKTHGDATRGARVAGWALGVDGQDAASYVTVSNL 650
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 143/544 (26%), Positives = 249/544 (45%), Gaps = 64/544 (11%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKF-GLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
TY+ L C D G ++H I KF GL + ++ N L MY + GR E+R++FD
Sbjct: 22 TYAAVLRRCADDRALEQGQRIHDHIRKFHGLSQDRFLANCLADMYGKCGRPDESRKIFDA 81
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +K+ SW +++ +++ D EA+ L M + G+ + +F S AC + L+
Sbjct: 82 IADKNVFSWTILIAAFSESVDRRWEALHLLRFMDQSGVAPNAATFVSVLVACSELRCLDA 141
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
+H +G + VG L++ Y KC A F +M +N I WT +I+ N +
Sbjct: 142 VIALHARIASLGLDLEIVVGTALVNAYGKCGSVDRAKNAFAKMPIKNSICWTAVITANAQ 201
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL----- 287
+ A+ L++ M L+G+ P+ VTF+ + A + R + + L
Sbjct: 202 NGHFGPAMELYERMVLEGLKPDRVTFVSALDACASSPRSPPPRYRAVVAQRIASLAAAVA 261
Query: 288 -----SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
S P V L+ MY + + + ++F L R + WN +I+ +Q G A+
Sbjct: 262 ASGHGSSPIVAAALLNMYGKLGELDRAREIFHSLPERNAVMWNVMIAASSQAGAIHEALG 321
Query: 343 AFFGVIKE--SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
F+ + + ++P+ TF S+++A AA + R H+ ++ G+ D + +ALL
Sbjct: 322 FFWAMNLDGAARPDGSTFTSIISAC-AAGGVPPDLAVRIHAALLSSGVTLDDPLLTALLG 380
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
+Y K G +++RVF+E +EK WTA++SALA G + + ME +GVRP+ T
Sbjct: 381 LYAKCGRTDDARRVFSEIREKGVVPWTALVSALAADGRSSDAVAALRRMELEGVRPNEYT 440
Query: 461 FLSVLTVCGRNGMIH----------------------------------KGRHLFDSMLK 486
F++ + + G+ H + R +FD M
Sbjct: 441 FVAAIEAASQLGIAHGRSLHARATSAGLDSDPFVANTVMAMYASCGSIAEARAVFDGMGH 500
Query: 487 DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ-----IPGGPGLSVLQSLLGACRIHGN 541
++ ++CM++ L R G E+ L + +P P + S+L AC G
Sbjct: 501 RRNLV----SWNCMIEALARHGHSLESLALYSEMELDGVP--PSAATFVSVLAACSHVGE 554
Query: 542 VEMG 545
VE+G
Sbjct: 555 VELG 558
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 214/468 (45%), Gaps = 40/468 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N Y K G D+A F + + + W V++ ++ A+ RM L G+ D
Sbjct: 165 VNAYGKCGSVDRAKNAFAKMPIKNSICWTAVITANAQNGHFGPAMELYERMVLEGLKPDR 224
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVK-----------FGLDSEVYVGNALITMYSRWG 106
VT+ +AL C + +++ + G S V AL+ MY + G
Sbjct: 225 VTFVSALDACASSPRSP-PPRYRAVVAQRIASLAAAVAASGHGSSPIVAAALLNMYGKLG 283
Query: 107 RLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR--KGLRLDHVSFTS 164
L AR +F +P +++V WN +++ +Q G + L M R D +FTS
Sbjct: 284 ELDRAREIFHSLPERNAVMWNVMIAASSQAG--AIHEALGFFWAMNLDGAARPDGSTFTS 341
Query: 165 AASACGHEK-NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
SAC +L +IH + G + L+ Y+KC T DA +VF + ++
Sbjct: 342 IISACAAGGVPPDLAVRIHAALLSSGVTLDDPLLTALLGLYAKCGRTDDARRVFSEIREK 401
Query: 224 NVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMI 277
V+ WT ++S DAV+ + M L+GV PN+ TF+ I A S +G + GR +
Sbjct: 402 GVVPWTALVSALAADGRSSDAVAALRRMELEGVRPNEYTFVAAIEAASQLG--IAHGRSL 459
Query: 278 HGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISGYAQNGL 336
H S+P V N ++ MYA S+ ++ VFD + R ++SWN +I A++G
Sbjct: 460 HARATSAGLDSDPFVANTVMAMYASCGSIAEARAVFDGMGHRRNLVSWNCMIEALARHGH 519
Query: 337 SLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII---KVGLDSDP 392
SL ++ + + + P+A TF SVL A ++ L + H + G+ ++
Sbjct: 520 SLESLALYSEMELDGVPPSAATFVSVLAACSHVGEVELGY----HYFVAFRRDYGIQAEA 575
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEF--AWTAIISALARHGD 438
++D+ G+ G + +S F ++ ++ +W ++ A HGD
Sbjct: 576 EHIGCVVDLLGRAGWL-DSAESFIQSLPAADLSSSWAVLLGACKTHGD 622
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 195/644 (30%), Positives = 334/644 (51%), Gaps = 26/644 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF----EKSDDALSFALRMNLIGVVFD 56
++ Y K G + AL +F+ + PD++ WN + E+ D AL RM L G++ +
Sbjct: 177 LDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPN 236
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ LS C DH +H+ + + G +V V AL+TMY R G + E+ VF+
Sbjct: 237 RASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFE 296
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M ++ VSWNA+++ + Q G + A M ++G R + ++F +A A + +
Sbjct: 297 AMAVRNHVSWNAMIAAFAQCG-HRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQD 355
Query: 177 LGKQ--IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
LG+ +HG G V VG L++ Y A F + +N++SW M++
Sbjct: 356 LGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTA 415
Query: 235 -----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN-FLS 288
+A+ LF M+ + PN V+++ ++ V E R IH + F
Sbjct: 416 YGDNGRAREAMELFAAMKRQSLAPNKVSYLAVL---GCCEDVSEARSIHAEVVGNGLFAQ 472
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
E S+ N ++ M+AR S++++ FD ++ +SWN ++ + A+ AF+ +
Sbjct: 473 ESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQ 532
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI-IKVGLDSDPIVGSALLDMYGKRG 406
E +P+ +T SV++ A+ +L+ G+ + + ++ D +V SA+++M K G
Sbjct: 533 HEGFRPDKFTLVSVVDVC--ADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCG 590
Query: 407 S-IFESQRVFNETQE--KSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFL 462
S + E +R+F + K AW +I+A A+HG + F+ M+ + VRPDS TF+
Sbjct: 591 SSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFV 650
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP-DHYSCMVDMLGRVGRLEEAEELVGQIP 521
SVL+ C G++ G H F + IE P +HY+C+VD+LGR+G L EAE+ + ++P
Sbjct: 651 SVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMP 710
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAI 581
V SLLGAC +G++E GER A A +++ + S YV++SN+YA G WE
Sbjct: 711 LPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIR 770
Query: 582 LRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+R+ M + V+K V + V + +H F + D +HP+S+ IY
Sbjct: 771 VREDMAERRVKKRVPGKSSIVVK-NRVHEFFARDRSHPQSDAIY 813
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/565 (24%), Positives = 255/565 (45%), Gaps = 29/565 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNL---------- 50
+ MY K D A F+ L + I +WNT+++ RM L
Sbjct: 66 VQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNK 125
Query: 51 --IGVVFDAVTYSTALSFCLDHEGFLFGLQL-HSLIVKFGLDSEVYVGNALITMYSRWGR 107
I V A+ S + ++ H I L+ +++V AL+ Y + G
Sbjct: 126 LTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGC 185
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
+ A VF + D + WNA + + + A+L + M +GL + SF + S
Sbjct: 186 VESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILS 245
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
+CG +L L + IH ++G+ V V L++ Y +C ++ VF M RN +S
Sbjct: 246 SCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVS 305
Query: 228 WTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAI--SIGNLVKEGRMIHGL 280
W MI+ +R A +++ M+ +G PN +TF+ + A S + E +HG
Sbjct: 306 WNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGW 365
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+ V L+TMY ++ + FD + + I+SWNA+++ Y NG + A
Sbjct: 366 IACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREA 425
Query: 341 VQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-DSDPIVGSAL 398
++ F + ++S PN ++ +VL G ED+S + H+ ++ GL + + + +
Sbjct: 426 MELFAAMKRQSLAPNKVSYLAVL---GCCEDVS--EARSIHAEVVGNGLFAQESSIANGV 480
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+ M+ + GS+ E+ F+ T K +W ++AL+ D + F M+++G RPD
Sbjct: 481 VRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDK 540
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG-RLEEAEELV 517
T +SV+ VC G + GR + + +E S +++M+ + G ++E E L
Sbjct: 541 FTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLF 600
Query: 518 GQIPGG-PGLSVLQSLLGACRIHGN 541
++P L +++ A HG+
Sbjct: 601 ARMPDDRKDLVAWNTMIAAYAQHGH 625
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 213/476 (44%), Gaps = 29/476 (6%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T + L C+ G QLH IVK GL +GN L+ MYS+ L +A F +
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMM----RKGLRLDHVSFTSAASACG---- 170
++ +WN +++ + A+ L M R R + ++ + A
Sbjct: 86 RSRGIATWNTLIAAQSSPA-----AVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDP 140
Query: 171 ------HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
++ + +H + V L+ Y KC A +VF R+ +
Sbjct: 141 SSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPD 200
Query: 225 VISWTTMISM-----NRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
+I W I R D A+ L + M L+G+ PN +F+ ++ + + + R IH
Sbjct: 201 LICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIH 260
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
+ FL + V L+TMY R S+ +S VF+ ++ R +SWNA+I+ +AQ G
Sbjct: 261 ARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRS 320
Query: 339 AAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
AA ++ + +E +PN TF + L A ++ L H I GL+ D +VG+A
Sbjct: 321 AAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTA 380
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L+ MYG G+I ++ F+ K+ +W A+++A +G M F M+ + + P+
Sbjct: 381 LVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPN 440
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
+++L+VL C + + R + ++ + + +V M R G LEEA
Sbjct: 441 KVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEA 493
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 186/431 (43%), Gaps = 76/431 (17%)
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C + +L G+Q+H +K G + +GN L+ YSKC DAN F + R + +W
Sbjct: 34 CIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATW 93
Query: 229 TTMISMNREDAV--SLFKEMRLDGVC---PNDVTFIGLIHAISIGNL----------VKE 273
T+I+ A L+ M+L+ PN +T I ++ AI+ G+ + +
Sbjct: 94 NTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQ 153
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
R++H ++ + V L+ Y + ++ + +VF + ++I WNA I A
Sbjct: 154 ARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAG 213
Query: 334 N------GLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG 387
N L L G++ PN +F ++L++ G + SL + H+ + ++G
Sbjct: 214 NDERPDRALLLVRRMWLEGLL----PNRASFVAILSSCG--DHSSLPLARSIHARVEELG 267
Query: 388 LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK 447
D +V +AL+ MYG+ GS+ ES VF ++ +W A+I+A A+ G + +
Sbjct: 268 FLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYW 327
Query: 448 EMENKGVRPDSITFLSVL-------------------------------------TVCGR 470
M+ +G RP+ ITF++ L T+ G
Sbjct: 328 RMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGS 387
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPD--HYSCMVDMLGRVGRLEEAEELVGQIPG---GPG 525
G I + R FD++ P+ + ++ M+ G GR EA EL + P
Sbjct: 388 TGAIDRARAAFDAI-------PAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPN 440
Query: 526 LSVLQSLLGAC 536
++LG C
Sbjct: 441 KVSYLAVLGCC 451
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 171/583 (29%), Positives = 318/583 (54%), Gaps = 44/583 (7%)
Query: 92 VYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM 151
++ N +I YS+ + A F +MP +DSVSWN I+S ++ G + ++++ +EM
Sbjct: 59 LFSWNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLH-IQSLGTFVEMW 117
Query: 152 RKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
+G + + +++ S SAC + + + GK +H +++ V VGN L+ Y+KC +
Sbjct: 118 IQGCQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLID 177
Query: 212 DANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
+ +VF + + NV++WT++IS ++E+ +F +MR D V ++ ++
Sbjct: 178 ASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCE 237
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR----------FESM---------- 306
+ G +HG +KT S V N ++MYA+ FE+M
Sbjct: 238 GETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTT 297
Query: 307 -----------QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPN 354
+ + F+ + R +ISWNA++ Y QN ++ + +++ E +P+
Sbjct: 298 MITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPD 357
Query: 355 AYTFGSVLNAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
TF + +GA ++++ K G + S +KVGL SD V ++ + +Y + G I E+Q
Sbjct: 358 WITF---VTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQN 414
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
+F+ QEK+ +W +I+ A++G+ V+ F+ M G +PD IT++++L+ C +G+
Sbjct: 415 LFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGL 474
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ + ++ F+SM KD+ I + +H+ CMVD+ GR G L+ A +++ Q+P P S+ +LL
Sbjct: 475 VKEAKYHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALL 534
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
ACRIH + EM E L+++ SY+L++N Y+ G E V+ +R+ MK K V+K
Sbjct: 535 SACRIHHDTEMAELAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQK 594
Query: 594 EVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ G SW +V + +H F++ D +HP+ ++IY+ E + ++K
Sbjct: 595 DPGCSWIEV--CNRVHVFTANDTSHPQVKDIYKALEDIVKKIK 635
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 234/480 (48%), Gaps = 47/480 (9%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y K + +A+ F + D VSWNT++S F +L + M + G +++TY
Sbjct: 69 YSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTY 128
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
++ LS C + F +G LH+ IV+ +V VGN L+ MY++ G + ++RVF+ +
Sbjct: 129 ASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLRE 188
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGK 179
+ V+W +++SG G E + + MRK + +D+ + C E N+ +G+
Sbjct: 189 HNVVTWTSLISGIAHFGSQ--EEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGE 246
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS------ 233
Q+HG ++K G + V VGN +S Y+KC A+ F M +VISWTTMI+
Sbjct: 247 QLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSG 306
Query: 234 --------MNR----------------------EDAVSLFKEMRLDGVCPNDVTFIGLIH 263
NR E+ + L+ M V P+ +TF+ +I
Sbjct: 307 NVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIG 366
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
A S + K G I +K S+ SV N IT+Y+R +++++ +FD + + +IS
Sbjct: 367 ACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLIS 426
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
WN+++ GYAQNG + ++ F ++ KP+ T+ ++L+ G + +K + +
Sbjct: 427 WNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILS--GCSHSGLVKEAKYHFNS 484
Query: 383 IIK-VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ K G+ ++D++G+ G + + + ++ K + W A++SA H D E
Sbjct: 485 MTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHDTE 544
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 181/372 (48%), Gaps = 44/372 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSDDALSFALRMNLIGVVFDA 57
++MY K G D + +FN L ++V+W +++SG F ++ +M V+ D
Sbjct: 167 VDMYAKCGLIDASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDN 226
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSR------------- 104
+T L C G QLH VK G++S V VGNA ++MY++
Sbjct: 227 FILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFET 286
Query: 105 --------W----------GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILA 146
W G + AR F+ MP ++ +SWNA+L Y Q+ + E +
Sbjct: 287 MAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNS-FWEEGLKL 345
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
I M+R+ +R D ++F + AC +LG QI ++K+G G+ VSV N ++ YS+
Sbjct: 346 YILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSR 405
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMI---SMNRE--DAVSLFKEMRLDGVCPNDVTFIGL 261
C +A +F + ++N+ISW +++ + N E + +F+ M + G P+ +T+I +
Sbjct: 406 CGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAI 465
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN--CLITMYARFESMQDSEKVFDELSCR 319
+ S LVKE + H + +F ++ + C++ ++ R ++ + + D++ +
Sbjct: 466 LSGCSHSGLVKEAKY-HFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFK 524
Query: 320 EIIS-WNALISG 330
S W AL+S
Sbjct: 525 PNASIWGALLSA 536
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 187/465 (40%), Gaps = 85/465 (18%)
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
AC + + Q+HG+S K G+G + + N ++ Y KC+ A +VF R+ ++ S
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 228 WTTMI-----------------SMNREDAVSL-------------------FKEMRLDGV 251
W MI M D+VS F EM + G
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
PN +T+ ++ A + + G+ +H ++ + V N L+ MYA+ + S++
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKR 181
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAED 370
VF+ L +++W +LISG A G F+ + K+ + + ++L +
Sbjct: 182 VFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETN 241
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
IS+ G++ H +K G++S VG+A L MY K G ++ F +WT +I
Sbjct: 242 ISI--GEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMI 299
Query: 431 SALARHGDYESVMNQFKEMENKG-------------------------------VRPDSI 459
++ + G+ E + F M + VRPD I
Sbjct: 300 TSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWI 359
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
TF++++ C + G + +K D + S + + R GR+EEA+
Sbjct: 360 TFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSA------ITLYSRCGRIEEAQ 413
Query: 515 ELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
L I +S S++G +G G ++ + M AG
Sbjct: 414 NLFDSIQEKNLIS-WNSIMGGYAQNGE---GMKVIEIFQNMLMAG 454
>gi|147836510|emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]
Length = 630
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 191/597 (31%), Positives = 320/597 (53%), Gaps = 41/597 (6%)
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
I + D++T LS C + G +H+ I+K GL + V+V N+L+ MY++ GR+ +
Sbjct: 36 IHTLSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIED 95
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
A ++FD MP+K VSW +++SG+ Q G + + ++++ M + L+ + + AC
Sbjct: 96 AAKLFDHMPDKTVVSWTSMMSGHCQRGAF--DEVISIFWRMLETLQPNEYTLAVILQACA 153
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
+++L+L + IH IK G+ + N L+ Y+K A K+ +R+ R+V+SWT+
Sbjct: 154 QKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTS 213
Query: 231 MIS---MN--REDAVSLFKEMRLDGVCPN--------DVTFIGLIHAISIGNLVKEGRMI 277
+IS +N E A+ F EM+ DGV PN T L+ S +K G I
Sbjct: 214 VISGCVLNGMVEKALLFFFEMQEDGVSPNTGDGQYLSTETIATLLQGCSHSKCLKLGEQI 273
Query: 278 HGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS 337
HG IK F V N LI MYA E + ++F ++SCR+I+SWN +IS + S
Sbjct: 274 HGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSS 333
Query: 338 LAAVQAFFGVIKESKPNAYT------FGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDS 390
A+ ++ E N + F ++L ++ A + SL+ GQ H +I + GL
Sbjct: 334 YQALM----LLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLIC 389
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D V ++L+DMYGK G + +++V E + +W ++I+A +G+ S +N FK+++
Sbjct: 390 DIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLK 449
Query: 451 NKGV-RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGR 509
N G RP++ITF ++L+ C G++ +G +F SM ++Y +EP +H++CM
Sbjct: 450 NTGAHRPNAITFTNILSACAHAGLVAEGFEIFKSMKREYSLEPRIEHFACM--------- 500
Query: 510 LEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNL 569
E + ++P PG V +LLG C + GN+++ ER+A L +EP V +SN+
Sbjct: 501 --RPEAFIQKMPFEPGPEVWGALLGGCGLFGNLDIAERVAKKLXILEPKSRAWRVALSNV 558
Query: 570 YAEKGDWEMVAILRKGM-KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
YA WE A +R M +S+ ++KE G+S +V + F GD HP + +Y
Sbjct: 559 YASVNKWEDAAKVRAEMRRSEELQKEGGWSSVEVRGZE--FRFMVGDTMHPEARMVY 613
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 229/475 (48%), Gaps = 46/475 (9%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M+MY K G+ + A +F+++ + +VSW +++SG + D+ +S RM L + +
Sbjct: 84 MDMYAKCGRIEDAAKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRM-LETLQPNE 142
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C +H I+K G + ++ N+LI Y++ G LV A ++
Sbjct: 143 YTLAVILQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKR 202
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR--------LDHVSFTSAASAC 169
+ +D VSW +++SG +G +A+L EM G+ L + + C
Sbjct: 203 LICRDVVSWTSVISGCVLNGMVE-KALLFFFEMQEDGVSPNTGDGQYLSTETIATLLQGC 261
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
H K L+LG+QIHG IK G+ V N L+ Y++ E A ++FR+M R+++SW
Sbjct: 262 SHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWN 321
Query: 230 TMIS-----MNREDAVSLFKEMRLDG----VCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
TMIS + A+ L E+ +G + P+ VT + I A S ++ G++IHG
Sbjct: 322 TMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGY 381
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
+ + + V N L+ MY + + +EKV +E+ R++ SWN+LI+ Y NG ++A
Sbjct: 382 ITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISA 441
Query: 341 VQAFFGV--IKESKPNAYTFGSVLNAVGAAEDIS------------------LKH--GQR 378
+ F + +PNA TF ++L+A A ++ ++H R
Sbjct: 442 LNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGFEIFKSMKREYSLEPRIEHFACMR 501
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ--EKSEFAWTAIIS 431
+ I K+ + P V ALL G G++ ++RV + E AW +S
Sbjct: 502 PEAFIQKMPFEPGPEVWGALLGGCGLFGNLDIAERVAKKLXILEPKSRAWRVALS 556
>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 188/591 (31%), Positives = 308/591 (52%), Gaps = 26/591 (4%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDS 123
L +D Q HS I+ ++ LI+ Y+ +G + ++ VFD + K+
Sbjct: 33 LQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNV 92
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
WN++++GY ++ + + + L M + L D + + + G ++L LGK IHG
Sbjct: 93 YLWNSLINGYVKNHQF--DNAIVLFRQMGRCLLPDDYTLATISKVSGEIQDLVLGKLIHG 150
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---------- 233
S+++G+ + + VGN +MS Y +C GDA KVF M RNV S+ +IS
Sbjct: 151 KSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDY 210
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI--SIGNLVKEGRMIHGLCIKT----NFL 287
D + F+ M+ G + T L+ S G GR +H +K
Sbjct: 211 SLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKF-DHGRELHCYLVKNGLDLKMC 269
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S+ + + LI MY+R + S +VFD++ R I W A+I+GY QNG A+ F +
Sbjct: 270 SDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREM 329
Query: 348 IKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
++ + PN + SVL A G + L G++ H+ IK+ + + +AL+DMY K
Sbjct: 330 QRKDRIRPNRVSLVSVLPACGLL--VGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKC 387
Query: 406 GSIFESQRVF-NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GS+ ++RVF N + K W++IISA HG + + + EM +G++PD IT + V
Sbjct: 388 GSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGV 447
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L+ C R+G++ +G +++S+ +Y ++PS + C+VD+LGR G+L++A + + ++P P
Sbjct: 448 LSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIP 507
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
G SV SLL A IHGN + L+++EP +Y+ +SN YA W+ + +R
Sbjct: 508 GPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASSRRWDEITEVRS 567
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
MK +G+RK G SW + D + H F+ D HP S IY M + L S M
Sbjct: 568 MMKERGLRKVPGISWITISDKN--HFFTVADKVHPSSSSIYEMLDDLVSIM 616
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 248/532 (46%), Gaps = 80/532 (15%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F++++ ++ WN++++G+ K+ D+A+ +M ++ D T +T + +
Sbjct: 83 VFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMGRC-LLPDDYTLATISKVSGEIQD 141
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
+ G +H ++ G S++ VGN++++MY R +A +VFDEMP ++ S+N I+SG
Sbjct: 142 LVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISG 201
Query: 133 YTQDG--DYGVEAIL--ALIEMMRKGLRLDHVSFTSAA---SACGHEKNLELGKQIH--- 182
G DY + A L M +G D +FT A+ C + + G+++H
Sbjct: 202 CAALGNLDYSLYADLWNFFRRMQCQGYNAD--AFTVASLLPMCCDSDGKFDHGRELHCYL 259
Query: 183 ---GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SM 234
G+ +KM H +G+ L+ YS+ + +VF +M RN+ WT MI +
Sbjct: 260 VKNGLDLKMCSDVH--MGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNG 317
Query: 235 NREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E A+ LF+EM R D + PN V+ + ++ A + + G+ +H IK F S+
Sbjct: 318 APEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLR 377
Query: 294 NCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI MYA+ S+ + +VFD S ++ I+W+++IS Y +G A+ ++ ++++
Sbjct: 378 NALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGI 437
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+ T VL+A C S ++ G+ SI+ S
Sbjct: 438 KPDMITVVGVLSAC-------------CRSGLVDEGI------------------SIYNS 466
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
E + E ++ L R G + ++ +EM + P + S+LT
Sbjct: 467 LTTEYEMKPSVEIC-GCVVDLLGRSGQLDQALDFIREMP---IIPGPSVWGSLLTA---- 518
Query: 472 GMIHKGRHLFDSMLKD------YHIEP-SPDHYSCMVDMLGRVGRLEEAEEL 516
+IH +SM +D +EP +P +Y + + R +E E+
Sbjct: 519 SVIHG-----NSMTRDLAYRCLLELEPENPSNYISLSNTYASSRRWDEITEV 565
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 195/644 (30%), Positives = 334/644 (51%), Gaps = 26/644 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF----EKSDDALSFALRMNLIGVVFD 56
++ Y K G + AL +F+ + PD++ WN + E+ D AL RM L G++ +
Sbjct: 173 LDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPN 232
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ LS C DH +H+ + + G +V V AL+TMY R G + E+ VF+
Sbjct: 233 RASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFE 292
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M ++ VSWNA+++ + Q G + A M ++G R + ++F +A A + +
Sbjct: 293 AMAVRNHVSWNAMIAAFAQCG-HRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQD 351
Query: 177 LGKQ--IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
LG+ +HG G V VG L++ Y A F + +N++SW M++
Sbjct: 352 LGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTA 411
Query: 235 -----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN-FLS 288
+A+ LF M+ + PN V+++ ++ V E R IH + F
Sbjct: 412 YGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQ 468
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
E S+ N ++ M+AR S++++ FD ++ +SWN ++ + A+ AF+ +
Sbjct: 469 ESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQ 528
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI-IKVGLDSDPIVGSALLDMYGKRG 406
E +P+ +T SV++ A+ +L+ G+ + + ++ D +V SA+++M K G
Sbjct: 529 HEGFRPDKFTLVSVVDVC--ADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCG 586
Query: 407 S-IFESQRVFNETQE--KSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFL 462
S + E +R+F + K AW +I+A A+HG + F+ M+ + VRPDS TF+
Sbjct: 587 SSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFV 646
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP-DHYSCMVDMLGRVGRLEEAEELVGQIP 521
SVL+ C G++ G H F + IE P +HY+C+VD+LGR+G L EAE+ + ++P
Sbjct: 647 SVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMP 706
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAI 581
V SLLGAC +G++E GER A A +++ + S YV++SN+YA G WE
Sbjct: 707 LPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIR 766
Query: 582 LRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+R+ M + V+K + V + +H F + D +HP+S+EIY
Sbjct: 767 VREDMAERRVKKRAPGKSSIVVK-NRVHEFFARDRSHPQSDEIY 809
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/567 (25%), Positives = 261/567 (46%), Gaps = 37/567 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFAL-------------- 46
+ MY K D A F+ L + I +WNT+++ +S A F L
Sbjct: 66 VQMYSKCRSLDDANAAFSALRSRGIATWNTLIAA--QSSPAAVFDLYTRMKLEERAENRP 123
Query: 47 -RMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW 105
R+ +I V+ + + S + + +H I L+ +++V AL+ Y +
Sbjct: 124 NRLTIIAVLGAIASGDPSSSSSSRAQARI----VHDDIRGSDLERDLFVATALLDAYGKC 179
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
G + A VF + D + WNA + + + A+L + M +GL + SF +
Sbjct: 180 GCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAI 239
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
S+CG +L L + IH ++G+ V V L++ Y +C ++ VF M RN
Sbjct: 240 LSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNH 299
Query: 226 ISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAI--SIGNLVKEGRMIH 278
+SW MI+ +R A +++ M+ +G PN +TF+ + A S + E +H
Sbjct: 300 VSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALH 359
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSL 338
G + V L+TMY ++ + FD + + I+SWNA+++ Y NG +
Sbjct: 360 GWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAR 419
Query: 339 AAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-DSDPIVGS 396
A++ F + ++S PN ++ +VL G ED+S + H+ ++ GL + + +
Sbjct: 420 EAMELFAAMKRQSLAPNKVSYLAVL---GCCEDVS--EARSIHAEVVGNGLFAQESSIAN 474
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
++ M+ + GS+ E+ F+ T K +W ++AL+ D + F M+++G RP
Sbjct: 475 GVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRP 534
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG-RLEEAEE 515
D T +SV+ VC G + GR + + +E S +++M+ + G ++E E
Sbjct: 535 DKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECER 594
Query: 516 LVGQIPGG-PGLSVLQSLLGACRIHGN 541
L ++P L +++ A HG+
Sbjct: 595 LFARMPDDRKDLVAWNTMIAAYAQHGH 621
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 214/472 (45%), Gaps = 25/472 (5%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T + L C+ G QLH IVK GL +GN L+ MYS+ L +A F +
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-------KGLRLDHVSFTSAASACGH 171
++ +WN +++ + A+ L M+ + RL ++ A ++
Sbjct: 86 RSRGIATWNTLIAAQSSPA-----AVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDP 140
Query: 172 EKNLELGKQ---IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
+ Q +H + V L+ Y KC A +VF R+ ++I W
Sbjct: 141 SSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICW 200
Query: 229 TTMISM-----NRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
I R D A+ L + M L+G+ PN +F+ ++ + + + R IH
Sbjct: 201 NAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVE 260
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
+ FL + V L+TMY R S+ +S VF+ ++ R +SWNA+I+ +AQ G AA
Sbjct: 261 ELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFA 320
Query: 343 AFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
++ + +E +PN TF + L A ++ L H I GL+ D +VG+AL+ M
Sbjct: 321 IYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTM 380
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
YG G+I ++ F+ K+ +W A+++A +G M F M+ + + P+ +++
Sbjct: 381 YGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSY 440
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
L+VL C + + R + ++ + + +V M R G LEEA
Sbjct: 441 LAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEA 489
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 185/427 (43%), Gaps = 72/427 (16%)
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C + +L G+Q+H +K G + +GN L+ YSKC DAN F + R + +W
Sbjct: 34 CIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATW 93
Query: 229 TTMISMNREDAV--SLFKEMRLDGVC---PNDVTFIGLIHAISIGNLV------KEGRMI 277
T+I+ A L+ M+L+ PN +T I ++ AI+ G+ + R++
Sbjct: 94 NTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSSSRAQARIV 153
Query: 278 HGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN--- 334
H ++ + V L+ Y + ++ + +VF + ++I WNA I A N
Sbjct: 154 HDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDER 213
Query: 335 ---GLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
L L G++ PN +F ++L++ G + SL + H+ + ++G D
Sbjct: 214 PDRALLLVRRMWLEGLL----PNRASFVAILSSCG--DHSSLPLARSIHARVEELGFLGD 267
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
+V +AL+ MYG+ GS+ ES VF ++ +W A+I+A A+ G + + M+
Sbjct: 268 VVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQ 327
Query: 452 KGVRPDSITFLSVL-------------------------------------TVCGRNGMI 474
+G RP+ ITF++ L T+ G G I
Sbjct: 328 EGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAI 387
Query: 475 HKGRHLFDSMLKDYHIEPSPD--HYSCMVDMLGRVGRLEEAEELVGQIPG---GPGLSVL 529
+ R FD++ P+ + ++ M+ G GR EA EL + P
Sbjct: 388 DRARAAFDAI-------PAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSY 440
Query: 530 QSLLGAC 536
++LG C
Sbjct: 441 LAVLGCC 447
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 193/641 (30%), Positives = 341/641 (53%), Gaps = 22/641 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF----EKSDDALSFALRMNLIGVVFD 56
+ MY G A +F+N+ D+VSW++++S + E S+ F L ++ V D
Sbjct: 141 LGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQ-DVELD 199
Query: 57 AVTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+VT + C GFL +H I++ +++ + +AL+ MYSR A R+F
Sbjct: 200 SVTMLSIAGAC-GELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIF 258
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M N+ SW A++S Y + + +A+ +EM+ + + V+ + S+C L
Sbjct: 259 SNMFNRSIASWTAMISCYNR-SRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLL 317
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
GK +H ++K S+G L+ Y++ KV + RN+ISW +IS+
Sbjct: 318 REGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVY 377
Query: 236 R-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++A+ +F +M+ G P+ + I A + L+ G IHG IK + L E
Sbjct: 378 ASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDE- 436
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IK 349
V N LI MY++ + + +FD + + +++WN++I G++Q G SL A++ F + +
Sbjct: 437 FVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLN 496
Query: 350 ESKPNAYTFGSVLNAVGAAEDIS-LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
N TF L A+ A + L+ G+ H +I G+ D + +AL+DMY K G +
Sbjct: 497 CLDMNEVTF---LTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDL 553
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ RVF+ E+S +W+A+I HGD ++ ++ F EM + ++P+ ITF+++L+ C
Sbjct: 554 RIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSAC 613
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G + +G+ F+SM K++ +EP+ +H++CMVD+L R G L+EA ++ +P S+
Sbjct: 614 SHSGYVEEGKFYFNSM-KNFEVEPNLEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASI 672
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LL CRIH ++M I L+ M +G Y L+SN+YAE+G+W++ +R MK
Sbjct: 673 WGALLNGCRIHQRMDMIRNIERDLLDMRTDDTGYYTLLSNIYAEEGNWDVSRKVRSAMKG 732
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
G++K G+S ++ ++ F +GD +H + +EI E
Sbjct: 733 IGLKKVPGYSTIELD--KKVYRFGAGDVSHWQVKEINTFLE 771
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 160/564 (28%), Positives = 280/564 (49%), Gaps = 19/564 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
Y + G + +F NPD W ++ S+ +A+S +M + +
Sbjct: 43 YSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIF 102
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S+ L C G ++H I+K+GLD + V +L+ MY G L A++VFD M
Sbjct: 103 SSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTT 162
Query: 121 KDSVSWNAILSGYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
+D VSW++I+S Y +G+ G+E L+ + + LD V+ S A ACG L L
Sbjct: 163 RDLVSWSSIISCYVDNGESSEGLEMFRLLVS---QDVELDSVTMLSIAGACGELGFLRLA 219
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR- 236
K +HG I+ T + + L+ YS+C+ A ++F M +R++ SWT MIS NR
Sbjct: 220 KSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRS 279
Query: 237 ---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+ A+ +F EM V PN VT + ++ + + NL++EG+ +H +K L + S+
Sbjct: 280 RWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLG 339
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK- 352
LI YA+F + EKV + R IISWN LIS YA GL A+ F + ++ +
Sbjct: 340 PALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQI 399
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P++++ S ++A + L G + H + IK + D V ++L+DMY K G + +
Sbjct: 400 PDSFSLSSSISACANVGLLWL--GHQIHGYAIKRHI-LDEFVQNSLIDMYSKCGHVDLAY 456
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F+ Q KS AW ++I ++ G+ + F +M + + +TFL+ + C G
Sbjct: 457 LIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMG 516
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+ KG+ L ++ Y ++ + ++DM + G L A + + +S ++
Sbjct: 517 HLEKGKWLHHKLIA-YGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVS-WSAM 574
Query: 533 LGACRIHGNVEMGERIADALMKME 556
+G C +HG+++ + +++ E
Sbjct: 575 IGGCGMHGDIDAAISLFAEMIQRE 598
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/531 (24%), Positives = 247/531 (46%), Gaps = 27/531 (5%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LHS ++ GL + LI YS+ G L ++ VF+ N DS W ++ +
Sbjct: 20 LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNF 79
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
G EAI +M+ K + + F+S AC NL++G+++HG IK G V
Sbjct: 80 CG-EAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVET 138
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCP 253
L+ Y +A KVF M R+++SW+++IS + + +F+ + V
Sbjct: 139 SLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVEL 198
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
+ VT + + A ++ + +HG I+ + + + L+ MY+R + +E++F
Sbjct: 199 DSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIF 258
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVGAAEDIS 372
+ R I SW A+IS Y ++ A+Q F +++ + PNA T +VL++
Sbjct: 259 SNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFN--L 316
Query: 373 LKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
L+ G+ H + +K + LD D + G AL++ Y + G + ++V + +++ +W +IS
Sbjct: 317 LREGKSVHCYAVKHIDLDDDSL-GPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLIS 375
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A G ++ + F +M+ +G PDS + S ++ C G++ G + +K + ++
Sbjct: 376 VYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILD 435
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADA 551
+ ++DM + G ++ A + +I ++ + G +I GN R+ D
Sbjct: 436 EFVQ--NSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQI-GNSLEAIRLFDQ 492
Query: 552 LMKMEPAGSGSYVLMSNLYA-------EKGDWEMVAILRKGMKSKGVRKEV 595
M + ++ + A EKG W L + + GV+K++
Sbjct: 493 -MYLNCLDMNEVTFLTAIQACSHMGHLEKGKW-----LHHKLIAYGVKKDL 537
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 4/246 (1%)
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
++H + T +P LI Y++ +Q S+ VF+ + W LI + +
Sbjct: 19 LLHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSN 78
Query: 336 LSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
A+ + +I + P + + F SVL A ++ + G+ H IIK GLD D +V
Sbjct: 79 FCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDV--GEEVHGRIIKYGLDVDHVV 136
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGV 454
++LL MYG G + +++VF+ + +W++IIS +G+ + F+ + ++ V
Sbjct: 137 ETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDV 196
Query: 455 RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAE 514
DS+T LS+ CG G + + + +++ IE +V M R AE
Sbjct: 197 ELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQ-RIETRGPLNDALVLMYSRCDDFSSAE 255
Query: 515 ELVGQI 520
+ +
Sbjct: 256 RIFSNM 261
>gi|225217042|gb|ACN85326.1| EMB2261 putative [Oryza brachyantha]
Length = 626
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 192/560 (34%), Positives = 298/560 (53%), Gaps = 30/560 (5%)
Query: 68 LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR-LVEARRVFDEMPNKDSVSW 126
L H G +H+ + GL ++ Y+ NAL++ Y R R L A R FD++P +D V+
Sbjct: 48 LRHPPPRLGYCIHARAARGGLLADRYLANALLSFYVRLPRHLPHALRAFDDLPRRDVVAH 107
Query: 127 NAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVS-----FTSAASACGHEKNLELGKQI 181
++IL+ + + G A+ +L M+ + D VS F++A AC ++ G +
Sbjct: 108 SSILAAFLRAG-MPRRALASLRSMLAEA---DDVSPNAHAFSAAVKACSVLRDRNAGACL 163
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR----- 236
HG + G+G V + L+ Y DA K F M + I +T++IS
Sbjct: 164 HGSILVRGFGDDDIVLSALVDMYGHASAPSDAQKAFEEMRAPDGICYTSLISAFVRNDWF 223
Query: 237 EDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKE--GRMIHGLCIKTNFLSEPSVC 293
E+AV F+ M ++GV P+ TF ++ A+ GNL +E GR H + V
Sbjct: 224 EEAVRWFRSMLMMNGVRPDGCTFGSMMTAL--GNLKRENQGRQAHAQVVTRGLCGNVIVE 281
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP 353
+ + MYA+ SM ++ KVFD + R +SW AL+ GY QNG V A F + +
Sbjct: 282 SSTLDMYAKCGSMVEARKVFDRMLVRNEVSWCALLGGYCQNG-EYEKVVALFREMDKKDG 340
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+ Y+ G+VL A S+K G+ H +++G D +V SAL+D+Y K G++ +
Sbjct: 341 DWYSLGTVLRACAGLS--SVKPGKEIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYAYT 398
Query: 414 VFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGM 473
VF + ++ W A+I A++G E +N F M +G RPD I+F+SVL C GM
Sbjct: 399 VFEASTVRNTITWNAMIGGFAQNGHGERAINLFDRMVREGPRPDYISFVSVLFACSHTGM 458
Query: 474 IHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLL 533
+ +GR F+SM +Y I P +HY+CMVD+L RV LEEAE+L+ + P S+ ++L
Sbjct: 459 VEQGRKYFNSMSNNYTIAPGIEHYNCMVDLLSRVELLEEAEDLINKSPFRGDSSLWAAIL 518
Query: 534 GACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRK 593
GA H N ++ ER+A +M+++P SYVL+ N+Y G WE +R+ M+S+ V+K
Sbjct: 519 GASATHSNPDVAERVAKKMMELQPQYHLSYVLLENVYRTVGRWEDALEIRRLMESRKVKK 578
Query: 594 EVGFSWAD-------VGDID 606
E G SW D VGD+D
Sbjct: 579 EPGMSWIDANRSKLCVGDVD 598
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 179/346 (51%), Gaps = 16/346 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLI-GVVFD 56
++MY + A F + PD + + +++S F ++D +A+ + M ++ GV D
Sbjct: 183 VDMYGHASAPSDAQKAFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMNGVRPD 242
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ + ++ + + G Q H+ +V GL V V ++ + MY++ G +VEAR+VFD
Sbjct: 243 GCTFGSMMTALGNLKRENQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGSMVEARKVFD 302
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M ++ VSW A+L GY Q+G+Y E ++AL M K D S + AC +++
Sbjct: 303 RMLVRNEVSWCALLGGYCQNGEY--EKVVALFREMDKK-DGDWYSLGTVLRACAGLSSVK 359
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
GK+IH ++MG V V + L+ Y+KC A VF RN I+W MI
Sbjct: 360 PGKEIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYAYTVFEASTVRNTITWNAMIGGFA 419
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + E A++LF M +G P+ ++F+ ++ A S +V++GR + N+ P
Sbjct: 420 QNGHGERAINLFDRMVREGPRPDYISFVSVLFACSHTGMVEQGRKYFN-SMSNNYTIAPG 478
Query: 292 V--CNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQN 334
+ NC++ + +R E ++++E + ++ R S W A++ A +
Sbjct: 479 IEHYNCMVDLLSRVELLEEAEDLINKSPFRGDSSLWAAILGASATH 524
>gi|357165628|ref|XP_003580444.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Brachypodium distachyon]
Length = 779
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 193/630 (30%), Positives = 348/630 (55%), Gaps = 37/630 (5%)
Query: 1 MNMYC-----KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIG 52
+N+Y + G D +F+ ++VSWNT++ + K+ +AL +RM G
Sbjct: 144 LNLYASCARYRHGGVDVVRRLFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLEDG 203
Query: 53 VVFDAVTYSTALSFCLDHEG----FLFGLQLHSLIVKFGLD--SEVYVGNALITMYSRWG 106
+ V++ + FL+G+ ++K G++ S+++V ++ I M+S G
Sbjct: 204 IRPTPVSFVNVFPAAASDDPSWPFFLYGM-----LIKHGVEYVSDLFVVSSAIAMFSEIG 258
Query: 107 RLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSA 165
+ AR VFD K+ WN +++GY Q+G + EA+ I++M KG+ LD V+F SA
Sbjct: 259 DVQSARMVFDHAAKKNIEVWNTMITGYVQNGQFS-EAMDLFIQIMGSKGVPLDVVTFLSA 317
Query: 166 ASACGHEKNLELGKQIHGVSIK-MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
+A ++ +LG+Q+HG +K M V +GN L+ YS+C A +F ++ +++
Sbjct: 318 ITAASQSQDGKLGQQLHGYLMKGMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQLPEKD 377
Query: 225 VISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
++SW TM++ + + + L +M G + VT ++ A S ++ G+ HG
Sbjct: 378 IVSWNTMVTAFVQNDFDFEGLLLVYQMHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHG 437
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSL 338
I+ E + + LI MY++ + +++VFD + R+ ++WNA+I+GY Q+G
Sbjct: 438 YLIRHGIEGE-GLESYLINMYSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPE 496
Query: 339 AAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
AV AF +++ +P + T SVL A + ++ G++ HS ++ LD++ VG+A
Sbjct: 497 QAVLAFRAMVEAGVEPTSVTLASVLPACEPVGE-GVQAGKQIHSFALRHSLDTNIFVGTA 555
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L+DMY K G I ++ VF+ EKS +T +IS L +HG + + F M++ G++PD
Sbjct: 556 LVDMYSKCGEITAAENVFDRMTEKSTVTYTTMISGLGQHGFGDRALFLFYSMQDNGLKPD 615
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
++TFL+ ++ C +G++ +G L+ SM + + + +P H+ C+VD+L + GR+EEA + V
Sbjct: 616 AVTFLAAISACNYSGLVDEGLSLYRSM-ETFGLSATPQHHCCIVDLLAKAGRVEEAYDFV 674
Query: 518 GQI-PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEP----AGSGSYVLMSNLYAE 572
+ G +++ SLL +C+ G E+ + D L+ +E A +G VL+S L+A
Sbjct: 675 ESLGEDGNFIAIWGSLLASCKAQGKQELTAFVTDKLLNIEKQYGHAHAGYNVLLSQLFAA 734
Query: 573 KGDWEMVAILRKGMKSKGVRKEVGFSWADV 602
+G+W LR+ M+ +G+RK+VG SW V
Sbjct: 735 EGNWSSADSLRREMRVRGLRKDVGSSWIKV 764
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 208/435 (47%), Gaps = 28/435 (6%)
Query: 104 RWGRLVEARRVF-DEMPNKD-SVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDH 159
+ GRL ARR+ D +P ++ N +L Y D+ + L R R DH
Sbjct: 41 KQGRLEHARRLLLDALPRPPPTLLCNVLLIAYVAGALPDHALGLYGVLNHAARPPPRSDH 100
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH--VSVGNVLMSTYSKC-EVTGDANKV 216
+++ A +AC + L LG+ +H ++ + N L++ Y+ C V
Sbjct: 101 YTYSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARYRHGGVDV 160
Query: 217 FRRMHD----RNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISI 267
RR+ D RNV+SW T++ + +A+ +F M DG+ P V+F+ + A +
Sbjct: 161 VRRLFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLEDGIRPTPVSFVNVFPAAAS 220
Query: 268 GNLVKEGRMIHGLCIK--TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWN 325
+ ++G+ IK ++S+ V + I M++ +Q + VFD + + I WN
Sbjct: 221 DD-PSWPFFLYGMLIKHGVEYVSDLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNIEVWN 279
Query: 326 ALISGYAQNGLSLAAVQAFFGVI--KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
+I+GY QNG A+ F ++ K + TF S + A ++D L GQ+ H ++
Sbjct: 280 TMITGYVQNGQFSEAMDLFIQIMGSKGVPLDVVTFLSAITAASQSQDGKL--GQQLHGYL 337
Query: 384 IKVGLDSDPIV-GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG-DYES 441
+K + P++ G+AL+ MY + G++ + +F++ EK +W +++A ++ D+E
Sbjct: 338 MKGMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEG 397
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
++ + +M G D++T +VL+ G + G+ +++ H S ++
Sbjct: 398 LLLVY-QMHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLIR--HGIEGEGLESYLI 454
Query: 502 DMLGRVGRLEEAEEL 516
+M + G ++ A+ +
Sbjct: 455 NMYSKSGHIDMAQRV 469
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 195/648 (30%), Positives = 343/648 (52%), Gaps = 18/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVV--FDAV 58
++ Y K G D A F++ N D VSWN ++ G S+ ++ L + G F
Sbjct: 89 IDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHG-NFSNGSIMAGLCWFIKGRFAHFQPN 147
Query: 59 TYSTALSFCLDHEGFLF--GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
S L E ++ G H I + G + + V N+L+++Y+ + A ++F
Sbjct: 148 ISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAE-VHMYFAHKLFG 206
Query: 117 EMPNK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
EM + D VSW+ ++ G+ Q G+ ++ + G+ D V+ S AC + K++
Sbjct: 207 EMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDI 266
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
LG +HG+ I G + VGN L+ YSKC A K F+ + ++N+ISW M+S
Sbjct: 267 SLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAY 326
Query: 234 -MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+N +A++L M +G ++VT ++ + R +HG+ I+ + S
Sbjct: 327 ILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNE 386
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ N +I YA+ ++ + VFD ++ +++++W+ +I+G+A+NG A+ F + +E
Sbjct: 387 LLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEE 446
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
PN + +++ A + + L+ + H ++ GL S+ +G++++DMY K G I
Sbjct: 447 VIPNNVSIMNLMEACAVSAE--LRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEA 504
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S R FN+ +K+ W+A+ISA +G + F++++ G +P+++T LS+L+ C
Sbjct: 505 SIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSH 564
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG--GPGLSV 528
G++ +G F SM++ + IEP +HYSC+VDML R G+ EA EL+ ++P G S+
Sbjct: 565 GGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASI 624
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LL +CR +GN+ +G A ++++EP S Y+L SNLYA G A +R+ K
Sbjct: 625 WGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKE 684
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
KGV+ G+S + F +GD +PR++EIY M + L MK
Sbjct: 685 KGVKVVAGYSLVHIN--SQTWRFVAGDVLNPRADEIYLMVKKLHGVMK 730
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 241/498 (48%), Gaps = 26/498 (5%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D + L C + F G +H ++K G S + N+ I Y ++G L A+R F
Sbjct: 47 DTWVLPSILKAC-SNTSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAF 105
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHV-----SFTSAASACG 170
D NKDSVSWN ++ G +G +I+A + KG R H S A
Sbjct: 106 DSTKNKDSVSWNVMVHGNFSNG-----SIMAGLCWFIKG-RFAHFQPNISSLLLVIQAFR 159
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN-VISWT 229
K G HG + G+ +SV N L+S Y++ + A+K+F M RN V+SW+
Sbjct: 160 ELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVHMYF-AHKLFGEMSVRNDVVSWS 218
Query: 230 TMIS-----MNREDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
MI E +F+ M + G+ P+ VT + ++ A + + G M+HGL I
Sbjct: 219 VMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIF 278
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
+ V N LI MY++ ++ + K F E+ + IISWN ++S Y N L A+
Sbjct: 279 RGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALAL 338
Query: 344 FFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
+++E ++ + T +VL D SLK + H II+ G +S+ ++ ++++D Y
Sbjct: 339 LGTMVREGAEKDEVTLANVLQIAKHFLD-SLK-CRSVHGVIIRKGYESNELLLNSVIDAY 396
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K + ++ VF+ +K AW+ +I+ AR+G + ++ FK+M N+ V P++++ +
Sbjct: 397 AKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQM-NEEVIPNNVSIM 455
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+++ C + + + + ++ + D + ++DM + G +E + QIP
Sbjct: 456 NLMEACAVSAELRQSKWAHGIAVRR-GLASEVDIGTSIIDMYSKCGDIEASIRAFNQIP- 513
Query: 523 GPGLSVLQSLLGACRIHG 540
+ +++ A RI+G
Sbjct: 514 QKNVVCWSAMISAFRING 531
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 160/352 (45%), Gaps = 22/352 (6%)
Query: 142 EAILALIEMMRKGLRL-DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVL 200
EA+ E+ G +L D S AC + + LG +HG IK G + S+ N
Sbjct: 30 EALQLYHEIRISGAQLSDTWVLPSILKACSN-TSFNLGTAMHGCLIKQGCQSSTSIANST 88
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPND 255
+ Y K A + F +++ +SW M+ N + + F + R PN
Sbjct: 89 IDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNI 148
Query: 256 VTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE 315
+ + +I A + +G HG ++ F + SV N L+++YA M + K+F E
Sbjct: 149 SSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVH-MYFAHKLFGE 207
Query: 316 LSCR-EIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDIS 372
+S R +++SW+ +I G+ Q G F ++ E+ P+ T SVL A +DIS
Sbjct: 208 MSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDIS 267
Query: 373 LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISA 432
L G H +I GL+ D VG++L+DMY K ++ + + F E EK+ +W ++SA
Sbjct: 268 L--GTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSA 325
Query: 433 LARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+ + + M +G D +T +VL + +H DS+
Sbjct: 326 YILNESHLEALALLGTMVREGAEKDEVTLANVLQI---------AKHFLDSL 368
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 133/299 (44%), Gaps = 21/299 (7%)
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
S N ++A+ L+ E+R+ G +D + I G +HG IK S S+
Sbjct: 25 SGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAMHGCLIKQGCQSSTSI 84
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF-GVIKES 351
N I Y ++ + +++ FD ++ +SWN ++ G NG +A + F G
Sbjct: 85 ANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHF 144
Query: 352 KPNAYTFGSVLNAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+PN S+L + A ++ + G H +I + G + V ++LL +Y + F
Sbjct: 145 QPN---ISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVHMYF- 200
Query: 411 SQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENK-GVRPDSITFLSVLTVC 468
+ ++F E +++ +W+ +I + G+ E F+ M + G+ PD +T +SVL C
Sbjct: 201 AHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKAC 260
Query: 469 GR------NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
M+H G +F + D + S ++DM + + A + +IP
Sbjct: 261 TNLKDISLGTMVH-GLVIFRGLEDDLFVGNS------LIDMYSKCFNVHSAFKAFKEIP 312
>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 193/599 (32%), Positives = 313/599 (52%), Gaps = 18/599 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++Y K G+ A F+ + D+VSWN ++ G+ ++ AL ++M +G
Sbjct: 484 LDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSALELFVQMLKLGFCPRQ 543
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T L C E G +H +K GL + V NAL +MY++ G L A +F+E
Sbjct: 544 TTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAEYLFEE 603
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +K VSWN ++ Y Q+G + EA+ M+ G+ + V+ S SA + ++
Sbjct: 604 MMDKSVVSWNTMIGAYGQNGFFD-EAMFVFKRMIGAGVEVSQVTIMSLPSANANPES--- 659
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
IH +IK+G SV L+ Y++ T A ++ + +N++S T +I+ E
Sbjct: 660 ---IHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAE 716
Query: 238 DA-----VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ F +M + P+ V + ++H I+ + G + HG IK+ + V
Sbjct: 717 AGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLV 776
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKES 351
N LI+MY++F +++ +F + + +ISWN++ISG Q G + A++ F + +
Sbjct: 777 TNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGC 836
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
P+A T S+L+ G ++ L+ G+R HS+I++ L+ + VG+AL+ MY K GSI +
Sbjct: 837 NPDAITIASLLS--GCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHA 894
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+RVF + W A+IS + +G + + EM+ +GV PD ITFL VL C
Sbjct: 895 ERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACTHG 954
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G+IH+GR F M K Y + P+ H +CMV +L RVG EEA + + P +V +
Sbjct: 955 GLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFIKNMEKEPDSAVWGA 1014
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
L AC IH V++GE +A L ++ G YVLMSNLYA G W+ VA +R+ MK G
Sbjct: 1015 FLSACCIHQEVKLGEYLAKKLYLLDCRNGGLYVLMSNLYAVTGRWDDVARVREMMKDAG 1073
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 142/472 (30%), Positives = 235/472 (49%), Gaps = 19/472 (4%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
+Q+ + ++K G+D VYV AL+ +Y + GR+ A FD MP +D VSWNA++ GY++
Sbjct: 461 AIQIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSR 520
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
+G Y A+ ++M++ G + +CG + + GK IHG IK G
Sbjct: 521 NG-YDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQ 579
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDG 250
V N L S Y+KC A +F M D++V+SW TMI + +A+ +FK M G
Sbjct: 580 VKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAG 639
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V + VT + L A N E IH IK + SV LI MYAR+ S +E
Sbjct: 640 VEVSQVTIMSLPSA----NANPES--IHCYTIKVGLADDASVVTSLICMYARYGSTDHAE 693
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGAA 368
++ L + ++S A+I+ YA+ G +L V F + + KP++ S+L+ G A
Sbjct: 694 LLYWSLPQKNLVSLTAIITSYAEAG-NLGLVMESFSQMHQLNMKPDSVAMLSILH--GIA 750
Query: 369 EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTA 428
+ + + G H + IK GLD+ +V + L+ MY K ++ +F+ EK +W +
Sbjct: 751 DPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNS 810
Query: 429 IISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY 488
+IS + G + F +M+ G PD+IT S+L+ C + G + G L +L++
Sbjct: 811 VISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRN- 869
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
+E + ++ M + G + AE + I G P L+ +++ +G
Sbjct: 870 KLEMEDFVGTALIHMYTKCGSIVHAERVFKSI-GKPCLATWNAMISGYSCYG 920
>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 851
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 196/655 (29%), Positives = 332/655 (50%), Gaps = 27/655 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP--DIVSWNTVLSGFEKSDDALSFALRMNLIGV--VFD 56
++MY + G+ + A +F + + +IVSWN +++ R L+ V + D
Sbjct: 110 VSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALSGDPRRGLELFRDCLVAVGGMVD 169
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T T L C G +H L K G D+ VGNAL+ MY++ G L +A R F
Sbjct: 170 EATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFP 229
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVE-AILALIEMMRKG-LRLDHVSFTSAASACGHEKN 174
E P+ VSWN +L YT++ + G +L +++ G + D ++ S AC
Sbjct: 230 EAPS--VVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTE 287
Query: 175 LELGKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L +++H +++ G V N L++ Y +C A++VF + + V SW T+IS
Sbjct: 288 LSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLIS 347
Query: 234 ----MNREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
N A+ LF +M G+ P+ + L+ A + + + HG ++
Sbjct: 348 AHAQQNTAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLER 407
Query: 289 EPSVCNCLITMYARFESMQDSEKV-FDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + L++ Y R + +V FD + + + W A+ISGY+QNGL ++Q F
Sbjct: 408 DTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLF--- 464
Query: 348 IKESKPNAYTFGSVLNAVGA----AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+E + SV++A A +E S++ G+ H +K L DP + S+L+DMY
Sbjct: 465 -REMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYS 523
Query: 404 KRGSIFESQRVFNETQEK-SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K G + +++ F+ + + ++ +WTA+I+ A +G + + +M +G+ PD T+L
Sbjct: 524 KCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYL 583
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYH-IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+L CG GM+ +G FD M +H IE +HYSC++ ML R GR +A L+ ++P
Sbjct: 584 GLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMP 643
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAI 581
P +L S+L AC IHG E+G +A+ L+++EP + YVL SN+YA W+ +
Sbjct: 644 QEPDAKILSSVLSACHIHGEAELGSDVAERLLELEPDKAEHYVLASNMYAGSRRWDDMRK 703
Query: 582 LRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+RK ++ G+ KE G SW DV ++ F +G+N HP E++ M L ++
Sbjct: 704 VRKMLRDAGIAKEPGCSWIDVA--GKVYSFVAGENPHPEMEQVRGMWRSLEERIR 756
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 238/490 (48%), Gaps = 33/490 (6%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFL------FGLQLHSLIVKFGLDSEVYVGNALITMYSRW 105
G+ D T A C GFL G Q+H+L K GL + +VGN+L++MY R
Sbjct: 61 GIAPDRFTLPPAARSC----GFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRC 116
Query: 106 GRLVEARRVFDEMPN--KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFT 163
GR+ +A +VF +P+ ++ VSWNA+++ + D G+E + + G +D +
Sbjct: 117 GRVEDAEKVFGGIPDAARNIVSWNALMAALSGDPRRGLELFRDCLVAV--GGMVDEATLV 174
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
+ C E G+ +HG++ K G+ VGN L+ Y+KC DA + F
Sbjct: 175 TVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEAP-- 232
Query: 224 NVISWTTMI---SMNRE--DAVSLFKEMRLD--GVCPND-VTFIGLIHAISIGNLVKEGR 275
+V+SW M+ + NRE A L ++M++ G P D +T + ++ A S + R
Sbjct: 233 SVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLR 292
Query: 276 MIHGLCIKTNF-LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
+H ++ + V N L+ Y R + +++VF ++ + + SWN LIS +AQ
Sbjct: 293 ELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQQ 352
Query: 335 GLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
+ AA++ F + KP+ ++ GS+L A A+ L H + H I++ GL+ D
Sbjct: 353 N-TAAAIELFIQMTNACGLKPDGFSIGSLLMAC--ADPKHLLHVKATHGFILRNGLERDT 409
Query: 393 IVGSALLDMYGKRGSIFESQRV-FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
++ ++LL Y + RV F+ +EK E W A+IS +++G + F+EM++
Sbjct: 410 VIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQS 469
Query: 452 -KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+G I+ S L C + G+ + LK + P S ++DM + G +
Sbjct: 470 VEGHCSSVISATSALMACSELSSVRLGKEMHCFALK-ADLCDDPFLSSSLIDMYSKCGFV 528
Query: 511 EEAEELVGQI 520
E+A ++
Sbjct: 529 EDARTFFDRL 538
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 426 WTAIISALARHGDYESVMNQFKEME--NKGVRPDSITFLSVLTVCG--RNGMIHKGRHLF 481
W A+++ +R G + + + ++G+ PD T CG R G GR +
Sbjct: 32 WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVH 91
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
++ + P + +V M GR GR+E+AE++ G IP
Sbjct: 92 -ALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIP 130
>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 709
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 290/531 (54%), Gaps = 11/531 (2%)
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
FL G +H+ +K + +++ N L+ MY + L A ++FDEMP ++ VSW+++++G
Sbjct: 21 FLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPERNVVSWSSVMTG 80
Query: 133 YTQDGDYGVEAILALIEMM-RKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
+G G L+L M R+G ++ + +F SA AC +N+ QI+ + ++ G
Sbjct: 81 CVHNG--GASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIYSLVVRSGL 138
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM----ISMNREDAVSLFKEM 246
+V + N ++ + +A ++F R+ ++W TM + + E ++ M
Sbjct: 139 ECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEFSSEQIPVFWRYM 198
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+GV P++ TF + ++ + +K G +H +++ + + V N L+ MY + + +
Sbjct: 199 NREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKL 258
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV 365
++ K FDE+ +++ SW + G Q G A+ + K KPN +T + LNA
Sbjct: 259 EEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNAC 318
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
S++ G++ H IK+G D D V +ALLDMY K G + + VF T +S +
Sbjct: 319 ACLA--SMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVS 376
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
WT +I A A++G + F EM+ V P+ ITF+ VL C + G + +G SM
Sbjct: 377 WTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMD 436
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
KDY I P DHY CMV +LGR G ++EA+EL+ ++P PG+ V Q+LL AC+IHG+VE G
Sbjct: 437 KDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQIHGDVETG 496
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVG 596
+ A+ +K + SYVL+SN+ AE +W+ V LR+ M+++ V+K G
Sbjct: 497 KLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDCVVSLRELMETRNVKKVPG 547
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 225/458 (49%), Gaps = 26/458 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVV-FD 56
+NMY K AL +F+ + ++VSW++V++G + DALS M+ G V +
Sbjct: 47 LNMYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPN 106
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ +AL C E Q++SL+V+ GL+ V++ NA +T R G+L EA ++F+
Sbjct: 107 EFTFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFE 166
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEKNL 175
P +D+V+WN ++ GY + + E I M R+G++ D +F SA + +L
Sbjct: 167 TSPIRDTVTWNTMMGGYLE---FSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSL 223
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
++G Q+H ++ GYG + VGN L+ Y K + + K F + ++V SWT M
Sbjct: 224 KMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGC 283
Query: 234 ---MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
A+++ +M+ GV PN T ++A + ++EG+ HGL IK +
Sbjct: 284 LQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDV 343
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V N L+ MYA+ M + VF + R ++SW +I AQNG A+Q F +KE
Sbjct: 344 CVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQ-IFDEMKE 402
Query: 351 S--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS----ALLDMYGK 404
+ +PN TF VL A + G + S + K D I G ++ + G+
Sbjct: 403 TSVEPNYITFICVLYACSQGGFVD--EGWKYLSSMDK---DYGIIPGEDHYICMVSILGR 457
Query: 405 RGSIFESQR-VFNETQEKSEFAWTAIISALARHGDYES 441
G I E++ + W ++SA HGD E+
Sbjct: 458 AGLIKEAKELILRMPFHPGVRVWQTLLSACQIHGDVET 495
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 197/549 (35%), Positives = 294/549 (53%), Gaps = 24/549 (4%)
Query: 98 LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL 157
+IT Y+R RLV+A +FDEMP +D VSWN+++SG + GD A+ EM + +
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNT-AVKLFDEMPERSV-- 128
Query: 158 DHVSFTSAASACGHEKNLELGKQI-HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
VS+T+ + C ++ +++ + + +K + N ++ Y + DA K+
Sbjct: 129 --VSWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKL 181
Query: 217 FRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F++M +NVISWTTMI + +A+ LFK M + F +I A +
Sbjct: 182 FKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAF 241
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
G +HGL IK FL E V LIT YA + + DS KVFDE ++ W AL+SGY
Sbjct: 242 HMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGY 301
Query: 332 AQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
+ N A+ F G+++ S PN TF S LN+ A +L G+ H +K+GL++
Sbjct: 302 SLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG--TLDWGKEMHGVAVKLGLET 359
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D VG++L+ MY G++ ++ VF + +KS +W +II A+HG + F +M
Sbjct: 360 DAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMI 419
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDY-HIEPSPDHYSCMVDMLGRVGR 509
PD ITF +L+ C G + KGR LF M HI+ HY+CMVD+LGR G+
Sbjct: 420 RLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGK 479
Query: 510 LEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNL 569
L+EAEEL+ ++ P V +LL ACR+H +V+ GE+ A A+ ++ S +YVL+SN+
Sbjct: 480 LKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNI 539
Query: 570 YAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
YA G W V+ LR MK G+ K+ G SW + H F SGD P IY E
Sbjct: 540 YASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKK--HEFFSGD--QPHCSRIYEKLE 595
Query: 630 CLGSEMKYL 638
L ++K L
Sbjct: 596 FLREKLKEL 604
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 231/457 (50%), Gaps = 39/457 (8%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFD------A 57
Y +S + AL +F+ + D+VSWN+++SG + D MN +FD
Sbjct: 76 YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGD-------MNTAVKLFDEMPERSV 128
Query: 58 VTYSTALSFC-----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
V+++ ++ C +D LF + + VK D+ + N+++ Y ++G++ +A
Sbjct: 129 VSWTAMVNGCFRSGKVDQAERLF----YQMPVK---DTAAW--NSMVHGYLQFGKVDDAL 179
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
++F +MP K+ +SW ++ G Q+ G EA+ M+R ++ FT +AC +
Sbjct: 180 KLFKQMPGKNVISWTTMICGLDQNERSG-EALDLFKNMLRCCIKSTSRPFTCVITACANA 238
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+G Q+HG+ IK+G+ V L++ Y+ C+ GD+ KVF V WT ++
Sbjct: 239 PAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALL 298
Query: 233 ---SMNR--EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S+N+ EDA+S+F M + + PN TF +++ S + G+ +HG+ +K
Sbjct: 299 SGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLE 358
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
++ V N L+ MY+ ++ D+ VF ++ + I+SWN++I G AQ+G A F +
Sbjct: 359 TDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQM 418
Query: 348 IKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK--VGLDSDPIVGSALLDMYGK 404
I+ +K P+ TF +L+A L+ G++ ++ +D + ++D+ G+
Sbjct: 419 IRLNKEPDEITFTGLLSACSHCG--FLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGR 476
Query: 405 RGSIFESQRVFNETQEK-SEFAWTAIISALARHGDYE 440
G + E++ + K +E W A++SA H D +
Sbjct: 477 CGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVD 513
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 224/465 (48%), Gaps = 26/465 (5%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDAVTY 60
Y + G+ D AL +F + +++SW T++ G E+S +AL M + + +
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ ++ C + F G+Q+H LI+K G E YV +LIT Y+ R+ ++R+VFDE +
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVH 288
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+ W A+LSGY+ + + +A+ M+R + + +F S ++C L+ GK+
Sbjct: 289 EQVAVWTALLSGYSLNKKHE-DALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE 347
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-- 238
+HGV++K+G T VGN L+ YS DA VF ++ ++++SW ++I +
Sbjct: 348 MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGR 407
Query: 239 ---AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR-MIHGLCIKTNFLSEP-SVC 293
A +F +M P+++TF GL+ A S +++GR + + + N +
Sbjct: 408 GKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHY 467
Query: 294 NCLITMYARFESMQDSEKVFDELSCR--EIISWNALISG---YAQNGLSLAAVQAFFGVI 348
C++ + R ++++E++ + + + E++ W AL+S ++ A A F +
Sbjct: 468 TCMVDILGRCGKLKEAEELIERMVVKPNEMV-WLALLSACRMHSDVDRGEKAAAAIFNLD 526
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+S ++ + G ++S + + K G+ P GS+ + + GK+
Sbjct: 527 SKSSAAYVLLSNIYASAGRWSNVS-----KLRVKMKKNGIMKKP--GSSWVVIRGKKHEF 579
Query: 409 FE-SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
F Q + EK EF + L DY S ++ ++ + +
Sbjct: 580 FSGDQPHCSRIYEKLEFL-REKLKELGYAPDYRSALHDVEDEQKE 623
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 141/295 (47%), Gaps = 18/295 (6%)
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMR 247
HVS+ +++ Y++ DA +F M R+V+SW +MIS E AV LF EM
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 248 LDGVCPNDVTFIGLIH-AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
V V++ +++ G + + R+ + + +K + + N ++ Y +F +
Sbjct: 125 ERSV----VSWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKV 175
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV 365
D+ K+F ++ + +ISW +I G QN S A+ F +++ K + F V+ A
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
A + G + H IIK+G + V ++L+ Y I +S++VF+E +
Sbjct: 236 ANAPAFHM--GIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAV 293
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
WTA++S + + +E ++ F M + P+ TF S L C G + G+ +
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFAL--RMNLIGVVFDAVT 59
MY SG + A+ +F + IVSWN+++ G + +F + +M + D +T
Sbjct: 370 MYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEIT 429
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFG---LDSEVYVGNALITMYSRWGRLVEARRVFD 116
++ LS C H GFL + + G +D ++ ++ + R G+L EA + +
Sbjct: 430 FTGLLSAC-SHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIE 488
Query: 117 EMPNK-DSVSWNAILSG--YTQDGDYGVEAILALIEMMRK 153
M K + + W A+LS D D G +A A+ + K
Sbjct: 489 RMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSK 528
>gi|242089513|ref|XP_002440589.1| hypothetical protein SORBIDRAFT_09g003570 [Sorghum bicolor]
gi|241945874|gb|EES19019.1| hypothetical protein SORBIDRAFT_09g003570 [Sorghum bicolor]
Length = 613
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/520 (34%), Positives = 289/520 (55%), Gaps = 15/520 (2%)
Query: 94 VGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK 153
V N+L+ MY+R GR +A R FDEMP +DSVSWN++L+ D + + ++
Sbjct: 60 VWNSLVAMYARCGRRGDAARAFDEMPLRDSVSWNSLLAASASAADA-LALLRRMLRAAPG 118
Query: 154 GLRLDHVSFTSAASACGHEKNLELGKQ-----IHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
DH + T+ SAC +HG+++ G VSVGN L++ Y +C
Sbjct: 119 AAACDHATLTTVLSACARADGGGGTGAASLPVVHGLAVSCGLDAEVSVGNALITAYFECS 178
Query: 209 VTGDANKVFRRMHDRNVISWTTMIS-MNR----EDAVSLFKEMRLDGVCPNDVTFIGLIH 263
G A +VF M DRNV++WT M+S M R +++SLF++MR V N ++ +
Sbjct: 179 SPGSAERVFDAMADRNVVTWTAMVSGMARAERYRESLSLFRQMR-HAVDANRASYSSSLL 237
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
A + EG+ IHGL +K F ++ V + L+ MY++ M+D+ +VF + +
Sbjct: 238 ACAGSLAASEGQQIHGLVVKAGFETDLHVESELMDMYSKCGLMEDALRVFRSCQDPDEVF 297
Query: 324 WNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
++ G+AQNGL A + F ++ K +A +VL A GA+ +L G++ H+
Sbjct: 298 LTVILVGFAQNGLEEKAFELFAEMVGKGIDIDANMVSAVLGAFGASAPFAL--GKQIHAL 355
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
+IK + V + L++MY K G + ES VF+ T K+ W +II+A ARHG V
Sbjct: 356 VIKKCFGGNTYVCNGLINMYSKCGELQESIEVFDGTPSKNTVTWNSIIAAFARHGHGSEV 415
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
F+ M+ GV+P ++TFLS+L C G KG + +SM Y I P +HY+C+VD
Sbjct: 416 FGLFESMKADGVKPTNVTFLSLLHGCSHVGSASKGLEILNSMSSQYGIHPKVEHYACVVD 475
Query: 503 MLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGS 562
MLGR +L++A+ + P + Q+L+GAC H + E+G+ A+ L+ ++P + +
Sbjct: 476 MLGRASQLDDAKAFIEDGPFKDSALLWQALMGACSFHKDSEVGKYAAEKLLLLDPDCTAA 535
Query: 563 YVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADV 602
YVL+SN+Y+ +G W+ A + K M+ KG+RK+ G SW ++
Sbjct: 536 YVLLSNIYSSEGRWDDRARILKRMREKGLRKDTGKSWIEL 575
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 219/458 (47%), Gaps = 28/458 (6%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIG---VVFDAVT 59
MY + G+ A F+ + D VSWN++L+ + DAL+ RM D T
Sbjct: 67 MYARCGRRGDAARAFDEMPLRDSVSWNSLLAASASAADALALLRRMLRAAPGAAACDHAT 126
Query: 60 YSTALSFCLDHEGFLFGLQ-----LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+T LS C +G +H L V GLD+EV VGNALIT Y A RV
Sbjct: 127 LTTVLSACARADGGGGTGAASLPVVHGLAVSCGLDAEVSVGNALITAYFECSSPGSAERV 186
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD M +++ V+W A++SG + Y L+L MR + + S++S+ AC
Sbjct: 187 FDAMADRNVVTWTAMVSGMARAERY--RESLSLFRQMRHAVDANRASYSSSLLACAGSLA 244
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
G+QIHG+ +K G+ T + V + LM YSKC + DA +VFR D + + T ++
Sbjct: 245 ASEGQQIHGLVVKAGFETDLHVESELMDMYSKCGLMEDALRVFRSCQDPDEVFLTVILVG 304
Query: 233 -SMN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ N E A LF EM G+ + ++ A G+ IH L IK F
Sbjct: 305 FAQNGLEEKAFELFAEMVGKGIDIDANMVSAVLGAFGASAPFALGKQIHALVIKKCFGGN 364
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
VCN LI MY++ +Q+S +VFD + ++WN++I+ +A++G + V F +K
Sbjct: 365 TYVCNGLINMYSKCGELQESIEVFDGTPSKNTVTWNSIIAAFARHGHG-SEVFGLFESMK 423
Query: 350 ES--KPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
KP TF S+L+ VG+A K + +S + G+ + ++DM G
Sbjct: 424 ADGVKPTNVTFLSLLHGCSHVGSAS----KGLEILNSMSSQYGIHPKVEHYACVVDMLG- 478
Query: 405 RGSIFESQRVFNETQ--EKSEFAWTAIISALARHGDYE 440
R S + + F E + S W A++ A + H D E
Sbjct: 479 RASQLDDAKAFIEDGPFKDSALLWQALMGACSFHKDSE 516
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 186/409 (45%), Gaps = 30/409 (7%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIK----------MGYGTH--VSVGNVLMSTY 204
L++ + + CG +L LG +H V K H ++V N L++ Y
Sbjct: 9 LNYAHLSGLLARCGRAGDLRLGTALHAVVAKNPAHFRLCPHRSASLHHVLAVWNSLVAMY 68
Query: 205 SKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKEMRLDGVCP-----NDVTFI 259
++C GDA + F M R+ +SW ++++ + A +L R+ P + T
Sbjct: 69 ARCGRRGDAARAFDEMPLRDSVSWNSLLAASASAADALALLRRMLRAAPGAAACDHATLT 128
Query: 260 GLIHAISIGNLVKEGR-----MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFD 314
++ A + + ++HGL + +E SV N LIT Y S +E+VFD
Sbjct: 129 TVLSACARADGGGGTGAASLPVVHGLAVSCGLDAEVSVGNALITAYFECSSPGSAERVFD 188
Query: 315 ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLK 374
++ R +++W A++SG A+ ++ F + N ++ S L + A ++
Sbjct: 189 AMADRNVVTWTAMVSGMARAERYRESLSLFRQMRHAVDANRASYSSSL--LACAGSLAAS 246
Query: 375 HGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA 434
GQ+ H ++K G ++D V S L+DMY K G + ++ RVF Q+ E T I+ A
Sbjct: 247 EGQQIHGLVVKAGFETDLHVESELMDMYSKCGLMEDALRVFRSCQDPDEVFLTVILVGFA 306
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
++G E F EM KG+ D+ +VL G + G+ + ++K
Sbjct: 307 QNGLEEKAFELFAEMVGKGIDIDANMVSAVLGAFGASAPFALGKQIHALVIKKCF---GG 363
Query: 495 DHYSC--MVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+ Y C +++M + G L+E+ E+ P ++ S++ A HG+
Sbjct: 364 NTYVCNGLINMYSKCGELQESIEVFDGTPSKNTVT-WNSIIAAFARHGH 411
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M+MY K G + AL +F + +PD V +L GF ++ + A M G+ DA
Sbjct: 271 MDMYSKCGLMEDALRVFRSCQDPDEVFLTVILVGFAQNGLEEKAFELFAEMVGKGIDIDA 330
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S L F G Q+H+L++K YV N LI MYS+ G L E+ VFD
Sbjct: 331 NMVSAVLGAFGASAPFALGKQIHALVIKKCFGGNTYVCNGLINMYSKCGELQESIEVFDG 390
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLE 176
P+K++V+WN+I++ + + G +G E + L E M+ G++ +V+F S C H +
Sbjct: 391 TPSKNTVTWNSIIAAFARHG-HGSE-VFGLFESMKADGVKPTNVTFLSLLHGCSHVGSAS 448
Query: 177 LGKQIHGVSIKMGYGTHVSV 196
G +I S+ YG H V
Sbjct: 449 KGLEILN-SMSSQYGIHPKV 467
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 298/538 (55%), Gaps = 16/538 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP--NKDSVSWNAILSGYTQ 135
Q+H+ ++ G + EV +G++L Y + RL A F+ +P ++ SWN ILSGY++
Sbjct: 25 QVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSK 84
Query: 136 DGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
+L L MR+ +D + A AC LE G IHG+++K G
Sbjct: 85 SKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDD 144
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLD 249
V L+ Y++ A KVF + RN + W ++ + LF MR
Sbjct: 145 YVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDT 204
Query: 250 GVCPNDVTFIGLIHAISIGNLV--KEGRMIHGLCIKTNFLSEPSVCNC-LITMYARFESM 306
G+ + +T I L+ A GN+ K G+ +HG+ I+ +F+ + +I MY + +
Sbjct: 205 GLALDALTLICLVKAC--GNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLL 262
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAV 365
++ K+F+ R ++ W LISG+A+ ++ A F +++ES PN T ++L V
Sbjct: 263 DNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAIL--V 320
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ SL+HG+ H ++I+ G++ D + ++ +DMY + G+I ++ VF+ E++ +
Sbjct: 321 SCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVIS 380
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W+++I+A +G +E ++ F +M+++ V P+S+TF+S+L+ C +G + +G F+SM
Sbjct: 381 WSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMT 440
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+DY + P +HY+CMVD+LGR G + EA+ + +P P S +LL ACRIH V++
Sbjct: 441 RDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLA 500
Query: 546 ERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG 603
IA+ L+ MEP S YVL+SN+YA+ G WEMV +R+ M KG RK VG S +VG
Sbjct: 501 GEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEVG 558
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 229/457 (50%), Gaps = 23/457 (5%)
Query: 2 NMYCKSGQFDKALCIFNNLN--NPDIVSWNTVLSGFEKS-----DDALSFALRMNLIGVV 54
N Y +S + D A FN + + SWNT+LSG+ KS D L RM
Sbjct: 47 NAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDG 106
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D+ A+ C+ G+ +H L +K GLD + YV +L+ MY++ G + A++V
Sbjct: 107 VDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKV 166
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEA-ILALIEMMR-KGLRLDHVSFTSAASACGHE 172
FDE+P ++SV W ++ GY + Y + + L +MR GL LD ++ ACG+
Sbjct: 167 FDEIPVRNSVLWGVLMKGYLK---YSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNV 223
Query: 173 KNLELGKQIHGVSIKMGYGTHVS-VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
++GK +HGVSI+ + + ++ Y KC + +A K+F DRNV+ WTT+
Sbjct: 224 FAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTL 283
Query: 232 IS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS +A LF++M + + PN T ++ + S ++ G+ +HG I+
Sbjct: 284 ISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI 343
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ I MYAR ++Q + VFD + R +ISW+++I+ + NGL A+ F
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHK 403
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGK 404
+ ++ PN+ TF S+L+A + ++ K G + + + G+ + + ++D+ G+
Sbjct: 404 MKSQNVVPNSVTFVSLLSACSHSGNV--KEGWKQFESMTRDYGVVPEEEHYACMVDLLGR 461
Query: 405 RGSIFESQRVFNETQEKS-EFAWTAIISALARHGDYE 440
G I E++ + K AW A++SA H + +
Sbjct: 462 AGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVD 498
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 161/341 (47%), Gaps = 12/341 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK-SDDALSFAL--RMNLIGVVFDA 57
+ MY + G + A +F+ + + V W ++ G+ K S D F L M G+ DA
Sbjct: 151 VEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDA 210
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
+T + C + G +H + ++ +D Y+ ++I MY + L AR++F+
Sbjct: 211 LTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFE 270
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+++ V W ++SG+ + + VEA +M+R+ + + + + +C +L
Sbjct: 271 TSVDRNVVMWTTLISGFAK-CERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLR 329
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GK +HG I+ G + Y++C A VF M +RNVISW++MI+
Sbjct: 330 HGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFG 389
Query: 234 MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEP 290
+N E+A+ F +M+ V PN VTF+ L+ A S VKEG + + + E
Sbjct: 390 INGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEE 449
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISG 330
C++ + R + +++ D + + + S W AL+S
Sbjct: 450 EHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 186/400 (46%), Gaps = 24/400 (6%)
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH--DRNVISW 228
K L +Q+H I G+ V +G+ L + Y + A F R+ RN SW
Sbjct: 16 QAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSW 75
Query: 229 TTMIS-------MNREDAVSLFKEMR--LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
T++S D + L+ MR DGV ++ F + + +G L++ G +IHG
Sbjct: 76 NTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVF-AIKACVGLG-LLENGILIHG 133
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
L +K + V L+ MYA+ +M+ ++KVFDE+ R + W L+ GY +
Sbjct: 134 LAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKD-P 192
Query: 340 AVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGS 396
V F +++++ +A T ++ A G + K G+ H I+ +D + +
Sbjct: 193 EVFRLFCLMRDTGLALDALTLICLVKACGNV--FAGKVGKCVHGVSIRRSFIDQSDYLQA 250
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
+++DMY K + ++++F + +++ WT +IS A+ + F++M + + P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ T ++L C G + G+ + M+++ IE +++ +DM R G ++ A +
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTV 369
Query: 517 VGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
+P +S S++ A I+G + E D KM+
Sbjct: 370 FDMMPERNVIS-WSSMINAFGING---LFEEALDCFHKMK 405
>gi|293337115|ref|NP_001168043.1| uncharacterized protein LOC100381772 precursor [Zea mays]
gi|223945665|gb|ACN26916.1| unknown [Zea mays]
gi|224028321|gb|ACN33236.1| unknown [Zea mays]
Length = 780
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 201/613 (32%), Positives = 333/613 (54%), Gaps = 29/613 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+NMY K GQ A+ F + ++VSW T ++GF + +D ++ L + + GV +
Sbjct: 180 VNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINK 239
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++ L C Q+H +I+K L + V ALI+ Y+ G + +VF E
Sbjct: 240 YTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQE 299
Query: 118 MPNKDSVS----WNAILSGYTQDGDYGVE-AILALIEMMRKGLRLDHVSFTSAASACGHE 172
+ D+VS W+A +SG ++ + V+ +I L M+ + LR + + S S+
Sbjct: 300 V---DTVSNRSIWSAFISGVSR---HSVQRSIQLLRRMLFQCLRPNDKCYASVFSSVDSS 353
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
ELG+Q+H + IK G+ V V + L + YS+C D+ KVF M +++ +SWT+MI
Sbjct: 354 ---ELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMI 410
Query: 233 SM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + +A + + M +G PNDV+ ++ A +I + +G+ +HG ++ +
Sbjct: 411 AGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLRA-YG 469
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S+ +CL++MY++ + +Q + K+FD C++ I +++ISGYA NG S A+ F +
Sbjct: 470 RTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLM 529
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ + + S+++ A G+ H + KVG+ SD V S+L+ +Y K G
Sbjct: 530 LAAGFHIDRFLCSSIISI--CANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSG 587
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
++ +S++VF+E WTAII A+HG + + F M GV+PD++ +SVL+
Sbjct: 588 NLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLS 647
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
CGRNG++ +G F+SM Y +EP HY CMVD+LGR GRL EA+ + +P P
Sbjct: 648 ACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNS 707
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +LL ACR+H +V +G R + + E SG + MSN+ A GDWE V +RK +
Sbjct: 708 MVWSTLLAACRVHDDVVLG-RFVENKIHEENCDSGCFATMSNIRANSGDWEGVMEIRKSV 766
Query: 587 KSKGVRKEVGFSW 599
K V KE G+S+
Sbjct: 767 KD--VEKEPGWSF 777
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 236/462 (51%), Gaps = 26/462 (5%)
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV-SWNAILS 131
F F QL+ K GL + Y+ + ++ + ++ GRL +A R F++ + SV WN +S
Sbjct: 51 FAFAEQLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAIS 110
Query: 132 GYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAA--SACGHEKNLELGKQIHGVSIK 187
G ++G++ GVE L ++ +G + SFT + SAC + L +G+ +HG+ ++
Sbjct: 111 GAVRNGEHALGVEMFLDMV----RGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLR 166
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNREDAVS---L 242
V VG +++ Y KC G A F RM RNV+SWTT I+ + +ED V+ L
Sbjct: 167 RDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLL 226
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
EM GV N T ++ A S ++++E +HG+ IK+ + V LI+ YA
Sbjct: 227 LTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYAN 286
Query: 303 FESMQDSEKVF---DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFG 359
++Q EKVF D +S R I W+A ISG +++ + + + + +PN +
Sbjct: 287 AGAVQLCEKVFQEVDTVSNRSI--WSAFISGVSRHSVQRSIQLLRRMLFQCLRPNDKCYA 344
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
SV ++V ++E G++ H +IK G +V SAL MY + + +S +VF E Q
Sbjct: 345 SVFSSVDSSE-----LGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQ 399
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
E+ E +WT++I+ A HG + M +G P+ ++ ++L+ C + KG+
Sbjct: 400 EQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKE 459
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +L+ Y S +H C+V M + L+ A +L P
Sbjct: 460 VHGHVLRAYGRTTSINH--CLVSMYSKCKDLQTARKLFDATP 499
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 239/481 (49%), Gaps = 20/481 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLN-NPDIVSWNTVLSG-FEKSDDALSFALRMNLI---GVVF 55
+++ K G+ AL F + +V WNT +SG + AL + ++++
Sbjct: 77 VDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGVEMFLDMVRGSTCEP 136
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ TYS LS C E G +H ++++ + +V+VG +++ MY + G++ A F
Sbjct: 137 NSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEF 196
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
MP ++ VSW ++G+ Q D V A+L L EM+R G+ ++ + TS AC +
Sbjct: 197 WRMPIRNVVSWTTAIAGFVQQED-PVNAMLLLTEMLRSGVAINKYTATSILLACSQTSMI 255
Query: 176 ELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS 233
Q+HG+ IK Y HV V L+STY+ KVF+ + N W+ IS
Sbjct: 256 REANQVHGMIIKSELYLDHV-VKEALISTYANAGAVQLCEKVFQEVDTVSNRSIWSAFIS 314
Query: 234 -MNR---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++R + ++ L + M + PND + + ++ L GR +H L IK F+
Sbjct: 315 GVSRHSVQRSIQLLRRMLFQCLRPNDKCYASVFSSVDSSEL---GRQLHPLVIKDGFIHV 371
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + L TMY+R ++DS KVF+E+ ++ +SW ++I+G+A +G S+ A Q +I
Sbjct: 372 VLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIA 431
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E PN + ++L+A E L G+ H H+++ + L+ MY K +
Sbjct: 432 EGFTPNDVSLSAILSACNIPE--CLLKGKEVHGHVLR-AYGRTTSINHCLVSMYSKCKDL 488
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++++F+ T K + +++IS A +G E ++ F+ M G D S++++C
Sbjct: 489 QTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRFLCSSIISIC 548
Query: 469 G 469
Sbjct: 549 A 549
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 186/529 (35%), Positives = 298/529 (56%), Gaps = 23/529 (4%)
Query: 114 VFDEMPNK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+F+ +K D SWN++++ + GD EA+LA M + L SF A AC
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGD-SAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
++ GKQ H + GY + + V + L+ YS C DA KVF + RN++SWT+MI
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 233 -----SMNREDAVSLFKEMRLDGVCPNDVTFI---GLIHAISIGNLVKEGRM---IHGLC 281
+ N DAVSLFK++ +D +D F+ GL+ IS + V + IH
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 282 IKTNFLSEPSVCNCLITMYARFES--MQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
IK F SV N L+ YA+ + + K+FD++ ++ +S+N+++S YAQ+G+S
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 340 AVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
A + F ++K NA T +VL AV + +L+ G+ H +I++GL+ D IVG++
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG--ALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
++DMY K G + +++ F+ + K+ +WTA+I+ HG + F M + GVRP+
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
ITF+SVL C G+ +G F++M + +EP +HY CMVD+LGR G L++A +L+
Sbjct: 388 YITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 518 GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
++ P + SLL ACRIH NVE+ E L +++ + G Y+L+S++YA+ G W+
Sbjct: 448 QRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWK 507
Query: 578 MVAILRKGMKSKGVRKEVGFSWADV-GDIDGLHGFSSGDNTHPRSEEIY 625
V +R MK++G+ K GFS ++ G++ H F GD HP+ E+IY
Sbjct: 508 DVERVRMIMKNRGLVKPPGFSLLELNGEV---HVFLIGDEEHPQREKIY 553
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 226/446 (50%), Gaps = 24/446 (5%)
Query: 16 IFNN-LNNPDIVSWNTVLSGFEKSDDA----LSFALRMNLIGVVFDAVTYSTALSFCLDH 70
+FN ++ D+ SWN+V++ +S D+ L+F+ M + + ++ A+ C
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFS-SMRKLSLYPTRSSFPCAIKACSSL 89
Query: 71 EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL 130
G Q H FG S+++V +ALI MYS G+L +AR+VFDE+P ++ VSW +++
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 131 SGYTQDGDYGVEAILALIEMM------RKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
GY +G+ ++A+ +++ + LD + S SAC L + IH
Sbjct: 150 RGYDLNGN-ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTG--DANKVFRRMHDRNVISWTTMISMNRE----- 237
IK G+ VSVGN L+ Y+K G A K+F ++ D++ +S+ +++S+ +
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 238 DAVSLFKEMRLDGVCP-NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
+A +F+ + + V N +T ++ A+S ++ G+ IH I+ + V +
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSI 328
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
I MY + ++ + K FD + + + SW A+I+GY +G + A++ F +I +PN
Sbjct: 329 IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
TF SVL A A + ++ + ++ + G++ ++D+ G+ G + ++ +
Sbjct: 389 ITFVSVLAACSHA-GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 416 NETQEKSE-FAWTAIISALARHGDYE 440
+ K + W+++++A H + E
Sbjct: 448 QRMKMKPDSIIWSSLLAACRIHKNVE 473
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 175/350 (50%), Gaps = 26/350 (7%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLI--------GV 53
MY G+ + A +F+ + +IVSW +++ G++ + +AL + +L +L+ +
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR--LVEA 111
D++ + +S C +HS ++K G D V VGN L+ Y++ G + A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
R++FD++ +KD VS+N+I+S Y Q G + E L++ K + + ++ ++ A
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK--NKVVTFNAITLSTVLLAV 297
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
H L +GK IH I+MG V VG ++ Y KC A K F RM ++NV SWT
Sbjct: 298 SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWT 357
Query: 230 TMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIK 283
MI+ + A+ LF M GV PN +TF+ ++ A S L EG R + + K
Sbjct: 358 AMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAM--K 415
Query: 284 TNFLSEPSV--CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISG 330
F EP + C++ + R +Q + + + + + I W++L++
Sbjct: 416 GRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 103/178 (57%), Gaps = 9/178 (5%)
Query: 1 MNMYCKSGQFDKALC--IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVV- 54
++ Y K G+ A+ IF+ + + D VS+N+++S + +S ++A R+ VV
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284
Query: 55 FDAVTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
F+A+T ST L + H G L G +H +++ GL+ +V VG ++I MY + GR+ AR+
Sbjct: 285 FNAITLSTVL-LAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
FD M NK+ SW A+++GY G + +A+ M+ G+R ++++F S +AC H
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHG-HAAKALELFPAMIDSGVRPNYITFVSVLAACSH 400
>gi|302791537|ref|XP_002977535.1| hypothetical protein SELMODRAFT_106750 [Selaginella moellendorffii]
gi|300154905|gb|EFJ21539.1| hypothetical protein SELMODRAFT_106750 [Selaginella moellendorffii]
Length = 545
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 288/548 (52%), Gaps = 45/548 (8%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
M L GV D V AL C D G+ +HS I + GL ++ + NAL+ MY + G
Sbjct: 1 MQLQGVAPDRVALIAALGACQDPSRLAAGVGIHSRITEAGLQGDIVISNALVNMYGKCGA 60
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
L A +F +P D++SWN ++S Y QDG EA+ M +GL + V+F + S
Sbjct: 61 LESACEIFHGVPRNDAISWNGMISLYAQDGHSREEALELFRRMHGEGLTPNKVTFLAILS 120
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN--- 224
A + LE G++IH ++ GY +SVGN L+ YSKC DA K F M ++N
Sbjct: 121 AVSGARGLEEGRKIHTQVVESGYSGELSVGNALIDMYSKCGSLEDARKTFAGMDEKNKPD 180
Query: 225 VISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
++ WT MI+ + ++A LF++M+ G+ P+ +SIGN +
Sbjct: 181 LVLWTAMIAAYAGHGDYKEAFELFQQMQDQGLKPDKSL-------VSIGNAI-------- 225
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
+ MY + ++ D+ K+FD++ R+ +SW +I+ YA++G
Sbjct: 226 -----------------VHMYGKCGNVADARKMFDKMKERDTVSWTTMIAVYAEHGYDRE 268
Query: 340 AVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-DSDPIVGSA 397
A+Q F ++ ES P+ T +VL+A L G+ + ++ G + D ++G+A
Sbjct: 269 ALQIFKVMLLESVAPDKVTLINVLDACSNVS--GLAQGRLVYKQFVESGAHELDLVLGNA 326
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
+ M+G GS+ E++ +F + +W +I+A A+HG +E + F+ M + V+PD
Sbjct: 327 VARMFGSCGSLREAREIFESLAARDVVSWNCLITAYAQHGSFEESLRLFRRMLEECVKPD 386
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
+TF+ VL+ C G++ G F SM++DY I HY CMVD+LGR GRL EAEEL+
Sbjct: 387 EVTFVGVLSACSHGGLVADGCQFFVSMVQDYQIPAEEIHYGCMVDLLGRAGRLAEAEELL 446
Query: 518 GQIPGGPGLSVL-QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDW 576
++P V+ SLL +C++H +++ G+R A L+ M P + ++ ++A G+W
Sbjct: 447 SRLPCAATNDVMWTSLLSSCKLHSDLDRGKRAAKKLLAMVPGDPSHLLALATIHAASGEW 506
Query: 577 EMVAILRK 584
+ +RK
Sbjct: 507 KEAMRIRK 514
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 233/456 (51%), Gaps = 50/456 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVFD 56
+NMY K G + A IF+ + D +SWN ++S + + ++AL RM+ G+ +
Sbjct: 52 VNMYGKCGALESACEIFHGVPRNDAISWNGMISLYAQDGHSREEALELFRRMHGEGLTPN 111
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF- 115
VT+ LS G G ++H+ +V+ G E+ VGNALI MYS+ G L +AR+ F
Sbjct: 112 KVTFLAILSAVSGARGLEEGRKIHTQVVESGYSGELSVGNALIDMYSKCGSLEDARKTFA 171
Query: 116 --DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
DE D V W A+++ Y GDY EA +M +GL+ D K
Sbjct: 172 GMDEKNKPDLVLWTAMIAAYAGHGDYK-EAFELFQQMQDQGLKPD--------------K 216
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
+L VS+GN ++ Y KC DA K+F +M +R+ +SWTTMI+
Sbjct: 217 SL------------------VSIGNAIVHMYGKCGNVADARKMFDKMKERDTVSWTTMIA 258
Query: 234 MNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ E +A+ +FK M L+ V P+ VT I ++ A S + + +GR+++ +++
Sbjct: 259 VYAEHGYDREALQIFKVMLLESVAPDKVTLINVLDACSNVSGLAQGRLVYKQFVESGAHE 318
Query: 289 EPSVC-NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
V N + M+ S++++ ++F+ L+ R+++SWN LI+ YAQ+G +++ F +
Sbjct: 319 LDLVLGNAVARMFGSCGSLREAREIFESLAARDVVSWNCLITAYAQHGSFEESLRLFRRM 378
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++E KP+ TF VL+A ++ Q S + + ++ I ++D+ G+ G
Sbjct: 379 LEECVKPDEVTFVGVLSACSHGGLVA-DGCQFFVSMVQDYQIPAEEIHYGCMVDLLGRAG 437
Query: 407 SIFESQRVFNE--TQEKSEFAWTAIISALARHGDYE 440
+ E++ + + ++ WT+++S+ H D +
Sbjct: 438 RLAEAEELLSRLPCAATNDVMWTSLLSSCKLHSDLD 473
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/636 (31%), Positives = 328/636 (51%), Gaps = 25/636 (3%)
Query: 17 FNNLNNP-DIVSWNTVLS-----GFEKSDDALSFALRMNLIGVVFDAVTYSTALSFCLDH 70
FN +N + WN+ ++ G+ + AL +M G+ + +T+ + C
Sbjct: 10 FNRFSNLWTVAQWNSSITESVNQGY--AHKALLLFRQMKQNGLEPNNLTFPSVAKACSKL 67
Query: 71 EGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAIL 130
+ +H+ +VK ++++V +++ MY + +L A +F MP +D SWN+++
Sbjct: 68 LNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMI 127
Query: 131 SGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
G+ Q G V+ +++L EM +G+R D V+ + K+L++ + IH IK+G
Sbjct: 128 LGFAQLG--FVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIG 185
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD--RNVISWTTMIS-----MNREDAVSL 242
T VSV N ++ Y+KC G A VF + + +SW +MI+ AV
Sbjct: 186 IDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGF 245
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
FK+M G + T + L+ + ++ G++IH I+ S+ V N LI+MY++
Sbjct: 246 FKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSK 305
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGS 360
+ + +FD + + +SW A+I+GYA+ G L F ++ KP+ T S
Sbjct: 306 CGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKG-DLDEAMTLFSAMEAVGEKPDLVTIIS 364
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
+++ G + +L+ G+ ++ GL + +V +AL+D+Y K GS+ ++ +F E
Sbjct: 365 LMS--GCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPE 422
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
KS +WT +I+ A +G+++ + F +M G++P+ ITFL+VL C G + KG
Sbjct: 423 KSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWEC 482
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
F+ M K Y I P DHYSCM D+LGR GRL+EA E + +P P + + LL AC+IH
Sbjct: 483 FNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQ 542
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
NV +GE +A L ++EP + YV M+N+YA G W+ VA +R MK K G S
Sbjct: 543 NVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSPGKSLV 602
Query: 601 DVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
V H F+ D HP IY E L +MK
Sbjct: 603 QVN--GKTHEFTVEDRCHPEGLLIYETLENLALQMK 636
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 224/476 (47%), Gaps = 27/476 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K Q A +F+ + D+ SWN+++ GF + D +S M + G+ D+
Sbjct: 96 VDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVVSLFCEMGIEGIRADS 155
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT L + +HS +K G+D++V V N I Y++ G A VFD
Sbjct: 156 VTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDG 215
Query: 118 MPN--KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ K VSWN++++GY + +A+ +M+ G R D + S S+C + L
Sbjct: 216 IDKGLKTGVSWNSMIAGYAH-FEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVL 274
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
GK IH I++G + + V N L+S YSKC G A +F M + +SWT MI+
Sbjct: 275 FHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGY 334
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E +A++LF M G P+ VT I L+ ++ G+ I
Sbjct: 335 AEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNL 394
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
VCN LI +YA+ SM ++ ++F + + ++SW LI+G A NG A+ FF +++
Sbjct: 395 MVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVEL 454
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-----GLDSDPIVGSALLDMYGK 404
KPN TF +VL A A L+ G C + + KV GLD S + D+ G+
Sbjct: 455 GLKPNHITFLAVLQACNHAG--FLEKGWECFNLMTKVYKINPGLDHY----SCMADLLGR 508
Query: 405 RGSIFESQRVFNETQEKSEFA-WTAIISALARHGDY---ESVMNQFKEMENKGVRP 456
+G + E+ K + W+ ++SA H + E V E+E + P
Sbjct: 509 KGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVP 564
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 273/512 (53%), Gaps = 36/512 (7%)
Query: 126 WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVS 185
+NAI+ G + +E ++ +M+ KG+ D+ + AC + + G+++HG +
Sbjct: 107 YNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQA 166
Query: 186 IKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVSLFKE 245
IKMG + V V N LM Y+ C+V A KVF R+++SWTTMI
Sbjct: 167 IKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQ------------ 214
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
+ +G +EG ++ + +N + V N L+ MY +
Sbjct: 215 -----------------GYVKMG-FAREGVGLY-IIRNSNVNLDVFVGNALVDMYLKCGD 255
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
+ KVF E+ + ++SWN++ISG AQ G ++ F + + KP+ T +VLN+
Sbjct: 256 ANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNS 315
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+ L G+ H+++ + + +D +G+AL+DMY K GSI ++ VF K +
Sbjct: 316 CANLGVLEL--GKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVY 373
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
++TA+I LA HG ++ F EM G+ PD +TF+ VLT C G++ +GR F+ M
Sbjct: 374 SYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDM 433
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
Y++ P +HY CMVD+LGR G + EAEE + +P P VL +LLGAC+IHG VE+
Sbjct: 434 STIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVEL 493
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
GE + + K+EP G+YVLMSN+Y+ W LRK MK + + K G S ++
Sbjct: 494 GESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDG 553
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ +H F GD +HP+ +EIY++ + + S +K
Sbjct: 554 V--IHEFQKGDKSHPKIKEIYKLLDEIMSHLK 583
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 216/460 (46%), Gaps = 64/460 (13%)
Query: 13 ALCIFNNLNNPDIVSWNTVLSGFEKSD----DALSFALRMNLIGVVFDAVTYSTALSFCL 68
AL + L P++ +N ++ G S+ + L +M G+V D T L C
Sbjct: 92 ALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACA 151
Query: 69 DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
+ G ++H +K GL S+VYV N L+ MY+ + AR+VFD P +D VSW
Sbjct: 152 ESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTT 211
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
++ GY + G R+G+ L + ++ NL+
Sbjct: 212 MIQGYVKMG------------FAREGVGLYIIRNSNV--------NLD------------ 239
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDAN---KVFRRMHDRNVISWTTMIS-----MNREDAV 240
V VGN L+ Y KC GDAN KVF+ M +NV+SW +MIS ++++
Sbjct: 240 -----VFVGNALVDMYLKC---GDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESL 291
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
+F++M+ GV P+DVT + ++++ + +++ G+ +H + ++ + N L+ MY
Sbjct: 292 YMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMY 351
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFG 359
A+ S+ + VF ++ +++ S+ A+I G A +G A+ F + K +P+ TF
Sbjct: 352 AKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFV 411
Query: 360 SVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR-VF 415
VL A VG E+ + ++ L+ ++D+ G+ G I E++ +
Sbjct: 412 GVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEH----YGCMVDLLGRAGLINEAEEFIR 467
Query: 416 NETQEKSEFAWTAIISALARHGDY---ESVMNQFKEMENK 452
N E F A++ A HG ESVM + +++E +
Sbjct: 468 NMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPR 507
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 142/280 (50%), Gaps = 39/280 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
M MY A +F+ D+VSW T++ G+ K + FA
Sbjct: 182 MRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVK----MGFA--------------- 222
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
EG GL + I ++ +V+VGNAL+ MY + G AR+VF EMP
Sbjct: 223 ---------REGV--GLYI---IRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPV 268
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
K+ VSWN+++SG Q G + E++ +M R G++ D V+ + ++C + LELGK
Sbjct: 269 KNVVSWNSMISGLAQKGQFK-ESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKW 327
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMNRE 237
+H + +GN L+ Y+KC A VF+ M+ ++V S+T MI +M+ +
Sbjct: 328 VHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQ 387
Query: 238 --DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
A+ LF EM G+ P++VTF+G++ A S LV+EGR
Sbjct: 388 GGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGR 427
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G + A +F + ++VSWN+++SG + ++L +M +GV D
Sbjct: 247 VDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDD 306
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT L+ C + G +H+ + + + ++ ++GNAL+ MY++ G + +A VF
Sbjct: 307 VTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQA 366
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD S+ A++ G G G +A+ EM + G+ D V+F +AC H +E
Sbjct: 367 MNRKDVYSYTAMIVGLAMHGQGG-KALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEE 425
Query: 178 GKQ 180
G++
Sbjct: 426 GRK 428
>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/610 (30%), Positives = 315/610 (51%), Gaps = 19/610 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRM-----NLIGVVFDAV 58
Y K G AL +F+ + + +WN V+ G + S AL M N V D
Sbjct: 93 YAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGR-FSEALEMFWGMVNDGSVAVDGF 151
Query: 59 TYSTALSFCLDHEGFLFGLQLHSL----IVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
TY + C G ++ + I V+V AL+ M+++ G L EAR V
Sbjct: 152 TYPPVIKACAALGAVAQGRKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNV 211
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F+ M +D +W A++ G G++ +E + M +G +D + + SACG
Sbjct: 212 FESMQVRDLAAWTAMIGGTVHSGNW-LEVVDLFNHMRSEGFGVDSLIAATVISACGRAGE 270
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L++G +HG ++K G + V N L+ Y KC A+ +F + ++V+SW+++I
Sbjct: 271 LQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVG 330
Query: 235 NRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++ +VSLF EM G+ PN T ++ +S+ L++ G+ IH I+
Sbjct: 331 YSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERS 390
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + LI +Y++ ++ +E +F +++ WN++++GYA NG S +A A + K
Sbjct: 391 EFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQK 450
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
KP+ T SVL + L G+ H+++IK ++S V +ALLDMY K G +
Sbjct: 451 VGLKPDHVTVVSVLPLCN--QHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFL 508
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ VF E++ + +IS+ +H + ++ F M+ G+ PD +TF+++L+ C
Sbjct: 509 EVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCC 568
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G+I KG HL+ SML DY+I P +HYSC+VD+ R G+L+EA + + P + V
Sbjct: 569 SHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDV 628
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
L LL ACR+H +++ E + + + P G ++L+SN+YA+ G W V +R ++
Sbjct: 629 LGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQE 688
Query: 589 KGVRKEVGFS 598
+ ++KE G S
Sbjct: 689 RNLKKETGNS 698
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 234/476 (49%), Gaps = 25/476 (5%)
Query: 62 TALSFCLDHEGFLFGLQ----------LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
A S + H L LQ LH+ ++ G + L+ Y++ G + A
Sbjct: 43 AAASQVVSHASLLLRLQSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHA 102
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACG 170
RVFD MP ++S +WNA++ G G + EA+ M+ G + +D ++ AC
Sbjct: 103 LRVFDGMPRRNSFAWNAVIKGLVDAGRFS-EALEMFWGMVNDGSVAVDGFTYPPVIKACA 161
Query: 171 HEKNLELGKQI-HGVSIKMGYGT---HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
+ G+++ V + G +V V L+ ++KC +A VF M R++
Sbjct: 162 ALGAVAQGRKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLA 221
Query: 227 SWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+WT MI S N + V LF MR +G + + +I A ++ G +HG
Sbjct: 222 AWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCA 281
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
+K+ + V N L+ MY + ++ ++ +F + ++++SW++LI GY+QNG+ +V
Sbjct: 282 VKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSV 341
Query: 342 QAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
F +I PN+ T S+L + + I + G+ H I+ GL+ V SAL+D
Sbjct: 342 SLFCEMISLGINPNSSTLASILPCLSVLKLI--RSGKEIHCFSIRHGLERSEFVVSALID 399
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
+Y K+G I ++ +F T +K W ++++ A +G +S + ++ G++PD +T
Sbjct: 400 LYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVT 459
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+SVL +C ++ M+ +G+ L ++K Y I + ++DM + G LE A+E+
Sbjct: 460 VVSVLPLCNQHHMLIQGKELHAYVIK-YCINSVCSVNNALLDMYCKCGFLEVAKEV 514
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 170/319 (53%), Gaps = 12/319 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MYCK G + A C+F + N+ D+VSW++++ G+ ++ + ++S M +G+ ++
Sbjct: 297 VDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNS 356
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T ++ L CL + G ++H ++ GL+ +V +ALI +YS+ G + A +F
Sbjct: 357 STLASILP-CLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFW 415
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+KD WN++++GY +G Y A AL + + GL+ DHV+ S C L
Sbjct: 416 LTLDKDLAIWNSMVAGYAVNG-YSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLI 474
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GK++H IK + SV N L+ Y KC A +VF+ M +RN +++ +IS
Sbjct: 475 QGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFG 534
Query: 234 -MNRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEP 290
N ED A+S F M+ DG+ P+ VTF+ L+ S L+ +G + H + N E
Sbjct: 535 KHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEK 594
Query: 291 SVCNCLITMYARFESMQDS 309
+C++ +Y+R + ++
Sbjct: 595 EHYSCIVDLYSRCGKLDEA 613
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 209/434 (48%), Gaps = 13/434 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
++M+ K G D+A +F ++ D+ +W ++ G S + L N + G D+
Sbjct: 196 VDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDS 255
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ +T +S C G LH VK G ++YV NAL+ MY + G + A +F
Sbjct: 256 LIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWS 315
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+KD VSW++++ GY+Q+G + V L EM+ G+ + + S K +
Sbjct: 316 TNSKDVVSWSSLIVGYSQNGMHNVSVSL-FCEMISLGINPNSSTLASILPCLSVLKLIRS 374
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
GK+IH SI+ G V + L+ YSK + A +F D+++ W +M+ ++
Sbjct: 375 GKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAV 434
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N + A + ++ G+ P+ VT + ++ + +++ +G+ +H IK S SV
Sbjct: 435 NGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSV 494
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ MY + ++ +++VF ++ R +++N LIS + ++ A+ +FF ++K
Sbjct: 495 NNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQAL-SFFDLMKRDG 553
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ TF ++L+ A I K HS + + + S ++D+Y + G + E
Sbjct: 554 IAPDKVTFVALLSCCSHAGLID-KGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDE 612
Query: 411 SQRVFNETQEKSEF 424
+ + E+ E
Sbjct: 613 AWCFMSNMAEEPEI 626
>gi|414885414|tpg|DAA61428.1| TPA: hypothetical protein ZEAMMB73_429908 [Zea mays]
Length = 817
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 201/613 (32%), Positives = 334/613 (54%), Gaps = 29/613 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+NMY K GQ A+ F + ++VSW T ++GF + +D ++ L + + GV +
Sbjct: 217 VNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINK 276
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++ L C Q+H +I+K L + V ALI+ Y+ G + +VF E
Sbjct: 277 YTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQE 336
Query: 118 MPNKDSVS----WNAILSGYTQDGDYGVE-AILALIEMMRKGLRLDHVSFTSAASACGHE 172
+ D+VS W+A +SG ++ + V+ +I L M+ + LR + + S S+
Sbjct: 337 V---DTVSNRSIWSAFISGVSR---HSVQRSIQLLRRMLFQCLRPNDKCYASVFSSV--- 387
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ ELG+Q+H + IK G+ V V + L + YS+C D+ KVF M +++ +SWT+MI
Sbjct: 388 DSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMI 447
Query: 233 SM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + +A + + M +G PNDV+ ++ A +I + +G+ +HG ++ +
Sbjct: 448 AGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLRA-YG 506
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S+ +CL++MY++ + +Q + K+FD C++ I +++ISGYA NG S A+ F +
Sbjct: 507 RTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLM 566
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ + + S+++ A G+ H + KVG+ SD V S+L+ +Y K G
Sbjct: 567 LAAGFHIDRFLCSSIISI--CANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSG 624
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
++ +S++VF+E WTAII A+HG + + F M GV+PD++ +SVL+
Sbjct: 625 NLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLS 684
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
CGRNG++ +G F+SM Y +EP HY CMVD+LGR GRL EA+ + +P P
Sbjct: 685 ACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNS 744
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
V +LL ACR+H +V +G R + + E SG + MSN+ A GDWE V +RK +
Sbjct: 745 MVWSTLLAACRVHDDVVLG-RFVENKIHEENCDSGCFATMSNIRANSGDWEGVMEIRKSV 803
Query: 587 KSKGVRKEVGFSW 599
K V KE G+S+
Sbjct: 804 KD--VEKEPGWSF 814
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 236/462 (51%), Gaps = 26/462 (5%)
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV-SWNAILS 131
F F QL+ K GL + Y+ + ++ + ++ GRL +A R F++ + SV WN +S
Sbjct: 88 FAFAEQLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAIS 147
Query: 132 GYTQDGDY--GVEAILALIEMMRKGLRLDHVSFTSAA--SACGHEKNLELGKQIHGVSIK 187
G ++G++ GVE L ++ +G + SFT + SAC + L +G+ +HG+ ++
Sbjct: 148 GAVRNGEHALGVEMFLDMV----RGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLR 203
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNREDAVS---L 242
V VG +++ Y KC G A F RM RNV+SWTT I+ + +ED V+ L
Sbjct: 204 RDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLL 263
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
EM GV N T ++ A S ++++E +HG+ IK+ + V LI+ YA
Sbjct: 264 LTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYAN 323
Query: 303 FESMQDSEKVF---DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFG 359
++Q EKVF D +S R I W+A ISG +++ + + + + +PN +
Sbjct: 324 AGAVQLCEKVFQEVDTVSNRSI--WSAFISGVSRHSVQRSIQLLRRMLFQCLRPNDKCYA 381
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
SV ++V ++E G++ H +IK G +V SAL MY + + +S +VF E Q
Sbjct: 382 SVFSSVDSSE-----LGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQ 436
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
E+ E +WT++I+ A HG + M +G P+ ++ ++L+ C + KG+
Sbjct: 437 EQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKE 496
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+ +L+ Y S +H C+V M + L+ A +L P
Sbjct: 497 VHGHVLRAYGRTTSINH--CLVSMYSKCKDLQTARKLFDATP 536
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 239/481 (49%), Gaps = 20/481 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLN-NPDIVSWNTVLSG-FEKSDDALSFALRMNLI---GVVF 55
+++ K G+ AL F + +V WNT +SG + AL + ++++
Sbjct: 114 VDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGVEMFLDMVRGSTCEP 173
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
++ TYS LS C E G +H ++++ + +V+VG +++ MY + G++ A F
Sbjct: 174 NSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEF 233
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
MP ++ VSW ++G+ Q D V A+L L EM+R G+ ++ + TS AC +
Sbjct: 234 WRMPIRNVVSWTTAIAGFVQQED-PVNAMLLLTEMLRSGVAINKYTATSILLACSQTSMI 292
Query: 176 ELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS 233
Q+HG+ IK Y HV V L+STY+ KVF+ + N W+ IS
Sbjct: 293 REANQVHGMIIKSELYLDHV-VKEALISTYANAGAVQLCEKVFQEVDTVSNRSIWSAFIS 351
Query: 234 -MNR---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++R + ++ L + M + PND + + ++ L GR +H L IK F+
Sbjct: 352 GVSRHSVQRSIQLLRRMLFQCLRPNDKCYASVFSSVDSSEL---GRQLHPLVIKDGFIHV 408
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + L TMY+R ++DS KVF+E+ ++ +SW ++I+G+A +G S+ A Q +I
Sbjct: 409 VLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIA 468
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E PN + ++L+A E L G+ H H+++ + L+ MY K +
Sbjct: 469 EGFTPNDVSLSAILSACNIPE--CLLKGKEVHGHVLR-AYGRTTSINHCLVSMYSKCKDL 525
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++++F+ T K + +++IS A +G E ++ F+ M G D S++++C
Sbjct: 526 QTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRFLCSSIISIC 585
Query: 469 G 469
Sbjct: 586 A 586
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/515 (33%), Positives = 291/515 (56%), Gaps = 15/515 (2%)
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
+L DG G+ A L LI+ R L D+ ++ C +E G+ +H +
Sbjct: 60 LLRKSQSDGGTGLYA-LDLIQ--RGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDS 116
Query: 189 GY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----MNR-EDAVSL 242
+ H+ + N++++ Y+KC DA ++F M +++++WT +I+ NR DA+ L
Sbjct: 117 HFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLL 176
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR 302
F +M G PN T L+ A + + G +H C+K + S V + L+ MYAR
Sbjct: 177 FPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYAR 236
Query: 303 FESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSV 361
M ++ FD + + +SWNALISG+A+ G A+ + + +++ +P +T+ SV
Sbjct: 237 CGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSV 296
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
L+A + +L+ G+ H+H+IK GL +G+ LLDMY K GSI +++RVF+ +
Sbjct: 297 LSACASIG--ALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKP 354
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+W +++ A+HG + +++F++M G+ P+ I+FL VLT C +G++ +G + F
Sbjct: 355 DVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYF 414
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+ ++K Y +EP HY VD+LGRVG L+ AE + ++P P +V +LLGACR+H N
Sbjct: 415 E-LMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKN 473
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
+E+G A+ +++P SG +L+SN+YA G W VA +RK MK GV+K+ SW +
Sbjct: 474 MELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVE 533
Query: 602 VGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+ + +H F + D THPR +EI E + ++K
Sbjct: 534 IE--NAVHLFVANDETHPRIKEIRGKWEEISGKIK 566
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 178/340 (52%), Gaps = 16/340 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K G D A +F+ + D+V+W +++GF +++ DAL +M +G +
Sbjct: 130 VNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNH 189
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ L G G QLH+ +K+G S VYVG+AL+ MY+R G + A+ FD
Sbjct: 190 FTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP K VSWNA++SG+ + G+ G A+ L +M RK + H +++S SAC LE
Sbjct: 250 MPTKSEVSWNALISGHARKGE-GEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQ 308
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GK +H IK G +GN L+ Y+K DA +VF R+ +V+SW TM++
Sbjct: 309 GKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +E + F++M G+ PN+++F+ ++ A S L+ EG L K + EP
Sbjct: 369 HGLGKE-TLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK--YKVEPD 425
Query: 292 VCN--CLITMYARFESMQDSEKVFDELSCREIIS-WNALI 328
V + + + R + +E+ E+ + W AL+
Sbjct: 426 VPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 202/396 (51%), Gaps = 11/396 (2%)
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHS-LIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
+V D YS L C G +H+ L+ LD+ + + N ++ MY++ G L +A
Sbjct: 83 LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDA 142
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
RR+FDEMP KD V+W A+++G++Q+ + +A+L +M+R G + +H + +S A G
Sbjct: 143 RRMFDEMPTKDMVTWTALIAGFSQN-NRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGS 201
Query: 172 EKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
E L+ G Q+H +K GY + V VG+ L+ Y++C A F M ++ +SW +
Sbjct: 202 EHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNAL 261
Query: 232 ISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
IS + E A+ L +M+ P T+ ++ A + +++G+ +H IK+
Sbjct: 262 ISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGL 321
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
+ N L+ MYA+ S+ D+++VFD L +++SWN +++G AQ+GL + F
Sbjct: 322 KLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQ 381
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+++ +PN +F VL A + L G + K ++ D +D+ G+
Sbjct: 382 MLRIGIEPNEISFLCVLTACSHSG--LLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRV 439
Query: 406 GSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
G + ++R E E + W A++ A H + E
Sbjct: 440 GLLDRAERFIREMPIEPTAAVWGALLGACRMHKNME 475
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/465 (36%), Positives = 273/465 (58%), Gaps = 12/465 (2%)
Query: 169 CGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
C +++ + G+++H IK Y V + L+ Y+KCE G A VF M +RNV+SW
Sbjct: 20 CVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSW 79
Query: 229 TTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
T MIS + +A+ LF +M PN+ TF ++ + + + + GR IH K
Sbjct: 80 TAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFK 139
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
N+ + V + L+ MYA+ + ++ VF+ L R+++S A+ISGYAQ GL A++
Sbjct: 140 RNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALEL 199
Query: 344 FFGVIKESKPNAY-TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
F + +E + Y T+ S+L A+ +L HG++ HSH+++ L ++ ++L+DMY
Sbjct: 200 FCRLQREGMSSNYVTYASLLTALSGLA--ALDHGKQVHSHVLRCELPFYVVLQNSLIDMY 257
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITF 461
K G++ ++++FN ++ +W A++ ++HG V+ FK M E V+PDS+TF
Sbjct: 258 SKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTF 317
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKD-YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
L+VL+ C G+ KG +FD M+ IE +HY C++D+LGR GR+EEA EL+ ++
Sbjct: 318 LAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKM 377
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVA 580
P P ++ SLLGACR+H N +GE + L+++EP +G+YV++SNLYA G WE V
Sbjct: 378 PFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVR 437
Query: 581 ILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
+R+ M K V KE G SW ++ +H F + D +HPR EE++
Sbjct: 438 NVRELMMEKAVIKEPGRSWIELDQT--IHTFYASDRSHPRREEVF 480
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 207/398 (52%), Gaps = 19/398 (4%)
Query: 53 VVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
+ FD Y+ L+ C++ G ++H+ ++K VY+ LI +Y++ L AR
Sbjct: 8 IKFDG--YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCAR 65
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
VFDEM ++ VSW A++SGY+Q G + EA+ ++M+R + +F + S+C
Sbjct: 66 HVFDEMRERNVVSWTAMISGYSQRG-FASEALHLFVQMLRSDTEPNEFTFATVLSSCTGF 124
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
ELG+QIH K Y H+ VG+ L+ Y+K +A VF + +R+V+S T +I
Sbjct: 125 SGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAII 184
Query: 233 SMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S E+A+ LF ++ +G+ N VT+ L+ A+S + G+ +H ++
Sbjct: 185 SGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELP 244
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ N LI MY++ ++ + K+F+ + R +ISWNA++ GY+++G + V+ F +
Sbjct: 245 FYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLM 304
Query: 348 IKES--KPNAYTFGSVLNAV--GAAEDISLKHGQRCHS--HIIKVGLDSDPIVGSALLDM 401
+E+ KP++ TF +VL+ G ED L+ + I+ G++ V +D+
Sbjct: 305 REENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCV----IDL 360
Query: 402 YGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGD 438
G+ G + E+ + + E + W +++ A H +
Sbjct: 361 LGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSN 398
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 150/281 (53%), Gaps = 10/281 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
+Y K A +F+ + ++VSW ++SG+ + + +AL ++M + T
Sbjct: 54 LYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFT 113
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
++T LS C GF G Q+HS I K ++ ++VG++L+ MY++ GR+ EAR VF+ +P
Sbjct: 114 FATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLP 173
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D VS AI+SGY Q G EA+ + R+G+ ++V++ S +A L+ GK
Sbjct: 174 ERDVVSCTAIISGYAQLG-LDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGK 232
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-- 237
Q+H ++ +V + N L+ YSKC A K+F M R VISW M+ +
Sbjct: 233 QVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHG 292
Query: 238 ---DAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEG 274
+ V LFK MR + V P+ VTF+ ++ S G L +G
Sbjct: 293 KGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKG 333
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 111/191 (58%), Gaps = 21/191 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K+G+ +A +F L D+VS ++SG+ + ++AL R+ G+ +
Sbjct: 153 LDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNY 212
Query: 58 VTYS---TALS--FCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
VTY+ TALS LDH G Q+HS +++ L V + N+LI MYS+ G L AR
Sbjct: 213 VTYASLLTALSGLAALDH-----GKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYAR 267
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK--GLRLDHVSFTSAASACG 170
++F+ MP + +SWNA+L GY++ G G+E ++ L ++MR+ ++ D V+F + S C
Sbjct: 268 KIFNNMPVRTVISWNAMLVGYSKHGK-GIE-VVKLFKLMREENKVKPDSVTFLAVLSGCS 325
Query: 171 H----EKNLEL 177
H +K LE+
Sbjct: 326 HGGLEDKGLEM 336
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS----FALRMNLIGVVFD 56
++MY K G + A IFNN+ ++SWN +L G+ K + F L V D
Sbjct: 254 IDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPD 313
Query: 57 AVTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGN--ALITMYSRWGRLVEARR 113
+VT+ LS C H G GL++ ++ G + E + + +I + R GR+ EA
Sbjct: 314 SVTFLAVLSGC-SHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFE 372
Query: 114 VFDEMPNKDSVS-WNAIL 130
+ +MP + + + W ++L
Sbjct: 373 LIKKMPFEPTAAIWGSLL 390
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/610 (30%), Positives = 315/610 (51%), Gaps = 19/610 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRM-----NLIGVVFDAV 58
Y K G AL +F+ + + +WN V+ G + S AL M N V D
Sbjct: 98 YAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGR-FSEALEMFWGMVNDGSVAVDGF 156
Query: 59 TYSTALSFCLDHEGFLFGLQLHSL----IVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
TY + C G ++ + I V+V AL+ M+++ G L EAR V
Sbjct: 157 TYPPVIKACAALGAVAQGRKVWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNV 216
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F+ M +D +W A++ G G++ +E + M +G +D + + SACG
Sbjct: 217 FESMQVRDLAAWTAMIGGTVHSGNW-LEVVDLFNHMRSEGFGVDSLIAATVISACGRAGE 275
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L++G +HG ++K G + V N L+ Y KC A+ +F + ++V+SW+++I
Sbjct: 276 LQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVG 335
Query: 235 NRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++ +VSLF EM G+ PN T ++ +S+ L++ G+ IH I+
Sbjct: 336 YSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERS 395
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + LI +Y++ ++ +E +F +++ WN++++GYA NG S +A A + K
Sbjct: 396 EFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQK 455
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
KP+ T SVL + L G+ H+++IK ++S V +ALLDMY K G +
Sbjct: 456 VGLKPDHVTVVSVLPLCN--QHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFL 513
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ VF E++ + +IS+ +H + ++ F M+ G+ PD +TF+++L+ C
Sbjct: 514 EVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCC 573
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G+I KG HL+ SML DY+I P +HYSC+VD+ R G+L+EA + + P + V
Sbjct: 574 SHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDV 633
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
L LL ACR+H +++ E + + + P G ++L+SN+YA+ G W V +R ++
Sbjct: 634 LGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQE 693
Query: 589 KGVRKEVGFS 598
+ ++KE G S
Sbjct: 694 RNLKKETGNS 703
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 234/476 (49%), Gaps = 25/476 (5%)
Query: 62 TALSFCLDHEGFLFGLQ----------LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
A S + H L LQ LH+ ++ G + L+ Y++ G + A
Sbjct: 48 AAASQVVSHASLLLRLQSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHA 107
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACG 170
RVFD MP ++S +WNA++ G G + EA+ M+ G + +D ++ AC
Sbjct: 108 LRVFDGMPRRNSFAWNAVIKGLVDAGRFS-EALEMFWGMVNDGSVAVDGFTYPPVIKACA 166
Query: 171 HEKNLELGKQI-HGVSIKMGYGT---HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
+ G+++ V + G +V V L+ ++KC +A VF M R++
Sbjct: 167 ALGAVAQGRKVWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLA 226
Query: 227 SWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+WT MI S N + V LF MR +G + + +I A ++ G +HG
Sbjct: 227 AWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCA 286
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
+K+ + V N L+ MY + ++ ++ +F + ++++SW++LI GY+QNG+ +V
Sbjct: 287 VKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSV 346
Query: 342 QAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
F +I PN+ T S+L + + I + G+ H I+ GL+ V SAL+D
Sbjct: 347 SLFCEMISLGINPNSSTLASILPCLSVLKLI--RSGKEIHCFSIRHGLERSEFVVSALID 404
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
+Y K+G I ++ +F T +K W ++++ A +G +S + ++ G++PD +T
Sbjct: 405 LYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVT 464
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+SVL +C ++ M+ +G+ L ++K Y I + ++DM + G LE A+E+
Sbjct: 465 VVSVLPLCNQHHMLIQGKELHAYVIK-YCINSVCSVNNALLDMYCKCGFLEVAKEV 519
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 170/319 (53%), Gaps = 12/319 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MYCK G + A C+F + N+ D+VSW++++ G+ ++ + ++S M +G+ ++
Sbjct: 302 VDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNS 361
Query: 58 VTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T ++ L CL + G ++H ++ GL+ +V +ALI +YS+ G + A +F
Sbjct: 362 STLASILP-CLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFW 420
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+KD WN++++GY +G Y A AL + + GL+ DHV+ S C L
Sbjct: 421 LTLDKDLAIWNSMVAGYAVNG-YSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLI 479
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
GK++H IK + SV N L+ Y KC A +VF+ M +RN +++ +IS
Sbjct: 480 QGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFG 539
Query: 234 -MNRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-RMIHGLCIKTNFLSEP 290
N ED A+S F M+ DG+ P+ VTF+ L+ S L+ +G + H + N E
Sbjct: 540 KHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEK 599
Query: 291 SVCNCLITMYARFESMQDS 309
+C++ +Y+R + ++
Sbjct: 600 EHYSCIVDLYSRCGKLDEA 618
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 209/434 (48%), Gaps = 13/434 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
++M+ K G D+A +F ++ D+ +W ++ G S + L N + G D+
Sbjct: 201 VDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDS 260
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ +T +S C G LH VK G ++YV NAL+ MY + G + A +F
Sbjct: 261 LIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWS 320
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+KD VSW++++ GY+Q+G + V L EM+ G+ + + S K +
Sbjct: 321 TNSKDVVSWSSLIVGYSQNGMHNVSVSL-FCEMISLGINPNSSTLASILPCLSVLKLIRS 379
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
GK+IH SI+ G V + L+ YSK + A +F D+++ W +M+ ++
Sbjct: 380 GKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAV 439
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N + A + ++ G+ P+ VT + ++ + +++ +G+ +H IK S SV
Sbjct: 440 NGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSV 499
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N L+ MY + ++ +++VF ++ R +++N LIS + ++ A+ +FF ++K
Sbjct: 500 NNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQAL-SFFDLMKRDG 558
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ TF ++L+ A I K HS + + + S ++D+Y + G + E
Sbjct: 559 IAPDKVTFVALLSCCSHAGLID-KGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDE 617
Query: 411 SQRVFNETQEKSEF 424
+ + E+ E
Sbjct: 618 AWCFMSNMAEEPEI 631
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/601 (30%), Positives = 317/601 (52%), Gaps = 48/601 (7%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
QLH+ ++ S + +I++Y+ L EA +F + + ++W +++ +T
Sbjct: 26 QLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQS 84
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ +A+ + +EM G DH F S +C +L G+ +HG +++G + G
Sbjct: 85 LFS-KALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143
Query: 198 NVLMSTYSK--------------------CEVTGDAN----------------KVFRRMH 221
N LM+ Y+K +GD + +VF M
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 203
Query: 222 DRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
++V+S+ T+I S EDA+ + +EM + P+ T ++ S V +G+
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
IHG I+ S+ + + L+ MYA+ ++DSE+VF L CR+ ISWN+L++GY QNG
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 323
Query: 337 SLAAVQAFFG-VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A++ F V + KP A F SV+ A A +L G++ H ++++ G S+ +
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPA--CAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
SAL+DMY K G+I ++++F+ E +WTAII A HG ++ F+EM+ +GV+
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P+ + F++VLT C G++ + F+SM K Y + +HY+ + D+LGR G+LEEA
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
+ ++ P SV +LL +C +H N+E+ E++A+ + ++ G+YVLM N+YA G
Sbjct: 502 FISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGR 561
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
W+ +A LR M+ KG+RK+ SW ++ + HGF SGD +HP ++I + + +M
Sbjct: 562 WKEMAKLRLRMRKKGLRKKPACSWIEMK--NKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619
Query: 636 K 636
+
Sbjct: 620 E 620
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 160/272 (58%), Gaps = 9/272 (3%)
Query: 11 DKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFC 67
D +F + D+VS+NT+++G+ +S +DAL M + D+ T S+ L
Sbjct: 193 DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF 252
Query: 68 LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWN 127
++ + G ++H +++ G+DS+VY+G++L+ MY++ R+ ++ RVF + +D +SWN
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN 312
Query: 128 AILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIK 187
++++GY Q+G Y EA+ +M+ ++ V+F+S AC H L LGKQ+HG ++
Sbjct: 313 SLVAGYVQNGRYN-EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 188 MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSL 242
G+G+++ + + L+ YSKC A K+F RM+ + +SWT +I + +AVSL
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 243 FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
F+EM+ GV PN V F+ ++ A S LV E
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 224/471 (47%), Gaps = 50/471 (10%)
Query: 17 FNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGF 73
F L +P +++W +V+ F AL+ + M G D + + L C
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 74 LFGLQLHSLIVKFGLDSEVYVGNALITMYSRW---------GRLVE-------------- 110
FG +H IV+ G+D ++Y GNAL+ MY++ G + +
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 111 -------------ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL 157
RRVF+ MP KD VS+N I++GY Q G Y +A+ + EM L+
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE-DALRMVREMGTTDLKP 240
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
D + +S ++ GK+IHG I+ G + V +G+ L+ Y+K D+ +VF
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 218 RRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
R++ R+ ISW ++++ +A+ LF++M V P V F +I A + +
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G+ +HG ++ F S + + L+ MY++ +++ + K+FD ++ + +SW A+I G+A
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 333 QNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDS 390
+G AV F + ++ KPN F +VL A + G + + KV GL+
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY--FNSMTKVYGLNQ 478
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGDYE 440
+ +A+ D+ G+ G + E+ ++ E + W+ ++S+ + H + E
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLE 529
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 100/174 (57%), Gaps = 4/174 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY KS + + + +F+ L D +SWN++++G+ ++ ++AL +M V A
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V +S+ + C G QLH +++ G S +++ +AL+ MYS+ G + AR++FD
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
M D VSW AI+ G+ G +G EA+ EM R+G++ + V+F + +AC H
Sbjct: 404 MNVLDEVSWTAIIMGHALHG-HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSH 456
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/521 (35%), Positives = 286/521 (54%), Gaps = 21/521 (4%)
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
+ SWNA L + + EA+ +M+ G + +F A +C G Q+H
Sbjct: 21 TASWNARLRELARQRHFQ-EALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLH 79
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF-RRMHDRNV-ISWTTMI---SMNRE 237
G IK G V L+S Y KC A KVF H RN+ + + +I S+N
Sbjct: 80 GHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSR 139
Query: 238 --DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
DAV LF++MR +GV N VT +GLI + + G +H ++ + SV NC
Sbjct: 140 FSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNC 199
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS-----LAAVQAFFGVIKE 350
L+TMY R S+ + K+FD + + +I+WNA+ISGYAQNGL+ L F G++
Sbjct: 200 LLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV-- 257
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P+ T VL++ A + G+ I G +P + +AL++MY + G++ +
Sbjct: 258 --PDPVTLVGVLSS--CAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVK 313
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F+ EK+ +WTAII+ HG E + F EM + PD F+SVL+ C
Sbjct: 314 ARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSH 373
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+ KG + F +M +DY ++P P+HYSC+VD+LGR GRLEEA +L+G + P +V
Sbjct: 374 AGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWG 433
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LLGAC+IH NVE+ E + +++ EP G YVL+SN+++E G+ E + +R M+ +
Sbjct: 434 ALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERK 493
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
++KE G S+ + +H F +GD THP+++EIY M + L
Sbjct: 494 LKKEPGCSYVEYQ--GRIHLFLAGDRTHPQAQEIYHMLDGL 532
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 224/452 (49%), Gaps = 16/452 (3%)
Query: 27 SWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLI 83
SWN L + +AL+ +M G +A T+ A C L G QLH +
Sbjct: 23 SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 84 VKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD--SVSWNAILSGYTQDGDYGV 141
+K G + E +V +LI+MY + + AR+VFDE + +V +NA+++GY+ + +
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFS- 141
Query: 142 EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLM 201
+A+L +M ++G+ ++ V+ C +L G +H S++ G +SVGN L+
Sbjct: 142 DAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLL 201
Query: 202 STYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS-----LFKEMRLDGVCPNDV 256
+ Y +C A K+F M ++ +I+W MIS ++ ++ L+++M G+ P+ V
Sbjct: 202 TMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPV 261
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T +G++ + + GR + + F P + N LI MYAR ++ + +FD +
Sbjct: 262 TLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGM 321
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKH 375
+ + +ISW A+I+GY +G AVQ F +I + P+ F SVL+A A ++ K
Sbjct: 322 TEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHA-GLTEKG 380
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALA 434
+ GL P S ++D+ G+ G + E++++ + + A W A++ A
Sbjct: 381 LYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACK 440
Query: 435 RHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
H + E F+++ P +I + +L+
Sbjct: 441 IHRNVELAELAFEKVIE--FEPTNIGYYVLLS 470
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 172/342 (50%), Gaps = 17/342 (4%)
Query: 1 MNMYCKSGQFDKALCIF--NNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVF 55
++MYCK A +F N+ + V +N +++G+ + DA+ +M GV
Sbjct: 98 ISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSV 157
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+AVT + C FG LH+ V+FGLD ++ VGN L+TMY R G + AR++F
Sbjct: 158 NAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLF 217
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKN 174
D MP K ++WNA++SGY Q+G G +L L M G+ D V+ S+C H
Sbjct: 218 DGMPEKGLITWNAMISGYAQNGLAG--HVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGA 275
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
G+++ G+G + + N L++ Y++C A +F M ++NVISWT +I+
Sbjct: 276 HAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAG 335
Query: 234 ----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
E AV LF EM P+ F+ ++ A S L ++G + + ++ ++ +
Sbjct: 336 YGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKG-LYYFTAMERDYGLQ 394
Query: 290 PSV--CNCLITMYARFESMQDSEKVFDELSCR-EIISWNALI 328
P +C++ + R ++++ K+ +S + W AL+
Sbjct: 395 PGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALL 436
>gi|413933941|gb|AFW68492.1| hypothetical protein ZEAMMB73_143921 [Zea mays]
Length = 564
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 293/534 (54%), Gaps = 16/534 (2%)
Query: 76 GLQLHS-LIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYT 134
G LH+ L++ + ++ N LITMYS V A RVF +P + VSW ++SG
Sbjct: 36 GRALHARLLLTGAAAASTFLANHLITMYSHCADAVSAVRVFGVVPRPNLVSWTTLVSGLV 95
Query: 135 QDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
Q+ + +A+ A M R + + +SAA A G Q+H + I++G+ +
Sbjct: 96 QNSMHH-DALAAFAAMRRAHIAPTQFALSSAARAAAALSAPRPGTQLHCIGIRLGFDNEL 154
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLD 249
V + L YSKC + +A +VF +M ++ ++WTTMI + + E A+ +F++M+ +
Sbjct: 155 FVASNLADMYSKCGLLHEACRVFDQMPQKDAVTWTTMIDGYAKNGSLEAAILIFRDMKCE 214
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEG---RMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
G+ D A+S +K+G R +H IK F E V N L+ MYA+ +
Sbjct: 215 GLVGADQHV--FCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDMYAKSGDL 272
Query: 307 QDSEKVFD-ELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNA 364
+++ +V + ++S +LI GY + G A++ + + ++ +PN +TF S++
Sbjct: 273 ENASRVVSIDPGGWNVVSATSLIDGYVEAGRIEEALETYTELGRQGVEPNEFTFASMIK- 331
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
G A L+ G + H+ ++K L SD VGS L+ MYG G I S ++FNE ++E
Sbjct: 332 -GCAMHDLLEQGAQLHAQVLKTNLISDSFVGSTLVYMYGNCGLISLSLQLFNEIGYRTEI 390
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
AW A+I+ A+HG + F M + G+RP+ ITF+ +LT C G++ +G F SM
Sbjct: 391 AWNAVINVYAQHGHGWGAIQAFDRMTSSGIRPNHITFVCLLTACSHAGLVDEGLGYFHSM 450
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+ IEP +HYSC++DM GR GRL+EAE+ + ++P P SLLGACR+ GN E+
Sbjct: 451 KDAHGIEPKAEHYSCIIDMYGRAGRLDEAEKFISEMPVKPSAYAWCSLLGACRMQGNKEL 510
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
GE A LMK++P +G ++ +S +Y G WE V ++K MK ++K GFS
Sbjct: 511 GEVAAQNLMKLDPNNTGIHISLSGIYTSLGQWEDVKAVKKSMKDISIKKLPGFS 564
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 142/455 (31%), Positives = 231/455 (50%), Gaps = 20/455 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY A+ +F + P++VSW T++SG ++ DAL+ M +
Sbjct: 60 ITMYSHCADAVSAVRVFGVVPRPNLVSWTTLVSGLVQNSMHHDALAAFAAMRRAHIAPTQ 119
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
S+A G QLH + ++ G D+E++V + L MYS+ G L EA RVFD+
Sbjct: 120 FALSSAARAAAALSAPRPGTQLHCIGIRLGFDNELFVASNLADMYSKCGLLHEACRVFDQ 179
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLE 176
MP KD+V+W ++ GY ++G AIL +M +GL D F SA SA G K+
Sbjct: 180 MPQKDAVTWTTMIDGYAKNGSLEA-AILIFRDMKCEGLVGADQHVFCSALSASGGLKDGW 238
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH----DRNVISWTTMI 232
G+ +H IK G+ V N L+ Y+K +GD R + NV+S T++I
Sbjct: 239 FGRSLHCCIIKAGFELETVVRNALLDMYAK---SGDLENASRVVSIDPGGWNVVSATSLI 295
Query: 233 -----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ E+A+ + E+ GV PN+ TF +I ++ +L+++G +H +KTN +
Sbjct: 296 DGYVEAGRIEEALETYTELGRQGVEPNEFTFASMIKGCAMHDLLEQGAQLHAQVLKTNLI 355
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S+ V + L+ MY + S ++F+E+ R I+WNA+I+ YAQ+G A+QAF +
Sbjct: 356 SDSFVGSTLVYMYGNCGLISLSLQLFNEIGYRTEIAWNAVINVYAQHGHGWGAIQAFDRM 415
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+PN TF +L A A + G HS G++ S ++DMYG+ G
Sbjct: 416 TSSGIRPNHITFVCLLTACSHAGLVDEGLGYF-HSMKDAHGIEPKAEHYSCIIDMYGRAG 474
Query: 407 SIFESQRVFNETQEK-SEFAWTAIISALARHGDYE 440
+ E+++ +E K S +AW +++ A G+ E
Sbjct: 475 RLDEAEKFISEMPVKPSAYAWCSLLGACRMQGNKE 509
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 175/391 (44%), Gaps = 28/391 (7%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVV-FDA 57
+MY K G +A +F+ + D V+W T++ G+ K+ + A+ M G+V D
Sbjct: 162 DMYSKCGLLHEACRVFDQMPQKDAVTWTTMIDGYAKNGSLEAAILIFRDMKCEGLVGADQ 221
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ +ALS + FG LH I+K G + E V NAL+ MY++ G L A RV
Sbjct: 222 HVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDMYAKSGDLENASRVVSI 281
Query: 118 MPNK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
P + VS +++ GY + G EA+ E+ R+G+ + +F S C LE
Sbjct: 282 DPGGWNVVSATSLIDGYVEAGRI-EEALETYTELGRQGVEPNEFTFASMIKGCAMHDLLE 340
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G Q+H +K + VG+ L+ Y C + + ++F + R I+W +I++
Sbjct: 341 QGAQLHAQVLKTNLISDSFVGSTLVYMYGNCGLISLSLQLFNEIGYRTEIAWNAVINVYA 400
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG-------RMIHGLCIKT 284
+ A+ F M G+ PN +TF+ L+ A S LV EG + HG+ K
Sbjct: 401 QHGHGWGAIQAFDRMTSSGIRPNHITFVCLLTACSHAGLVDEGLGYFHSMKDAHGIEPKA 460
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNG---LSLAA 340
S C+I MY R + ++EK E+ + +W +L+ G L A
Sbjct: 461 EHYS------CIIDMYGRAGRLDEAEKFISEMPVKPSAYAWCSLLGACRMQGNKELGEVA 514
Query: 341 VQAFFGVIKESKPNAYTFGSVLNAVGAAEDI 371
Q + + + + ++G ED+
Sbjct: 515 AQNLMKLDPNNTGIHISLSGIYTSLGQWEDV 545
>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
Length = 794
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 200/647 (30%), Positives = 342/647 (52%), Gaps = 50/647 (7%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
+MY K G D A +F+ + + + V+WN ++ G+ ++ ++A+ M G+ V
Sbjct: 180 DMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRV 239
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T ST LS + G G Q H++ + GL+ + +G +++ Y + G + A +FD M
Sbjct: 240 TVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGM 299
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLEL 177
KD V+WN ++SGY Q G VE + + ++MR+ L+ D V+ ++ SA +NL+L
Sbjct: 300 IEKDVVTWNLLISGYVQQG--LVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKL 357
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GK+I I+ G + + + + + Y+KC +A KVF +++I W T++S +
Sbjct: 358 GKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYAD 417
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+ LF EM+L+ V PN +T+ +I ++ V E + +
Sbjct: 418 SGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEM--------------- 462
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
F MQ S +F L ISW +++G QNG S A+ F ++ES
Sbjct: 463 ----------FLQMQSS-GIFPNL-----ISWTTMMNGLVQNGCSEEAI-LFLRKMQESR 505
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS-DPIVGSALLDMYGKRGSIF 409
+PNA+T L+A A SL G+ H +II+ S + ++L+DMY K G I
Sbjct: 506 LRPNAFTITVALSA--CANLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDIN 563
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++RVF + A+ISA A +G + ++ +E+ GV+PD+IT S+L+ C
Sbjct: 564 KAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLS-CN 622
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
+++ +F M+ + ++P +HY MVD+L G ++A L+ ++P P ++
Sbjct: 623 YGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMV 682
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
QSL +C E+ E ++ L++ EP SG+YV++SN YA +G W+ VA +R+ MK K
Sbjct: 683 QSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMISNAYAVEGSWDEVAKMREMMKVK 742
Query: 590 GVRKEVGFSWADV-GDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
G++K+ G SW + G+ +G+H F + D TH R++EI RM L +M
Sbjct: 743 GLKKKPGCSWIQIKGEEEGVHVFVANDKTHLRNDEIQRMLALLLYDM 789
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 146/550 (26%), Positives = 266/550 (48%), Gaps = 19/550 (3%)
Query: 40 DALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNA 97
+ALS M+ + Y L C+ G Q+H+ I+K G Y+
Sbjct: 17 EALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYARNEYIETK 76
Query: 98 LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL 157
L+ Y++ L A+ +F ++ ++ SW AI+ + G G A++ +EM+ G+
Sbjct: 77 LVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIG-LGEGALMGFVEMLENGIFP 135
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
D+ + ACG + G+ +HG K G V V + L Y KC V DA KVF
Sbjct: 136 DNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVF 195
Query: 218 RRMHDRNVISWTTMI------SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
+ DRN ++W ++ MN E+A+ L EMR +G+ P VT + A + +
Sbjct: 196 DYIPDRNAVAWNALMVGYVQNGMN-EEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGI 254
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
+EG+ H + I + + ++ Y + ++ +E +FD + +++++WN LISGY
Sbjct: 255 EEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGY 314
Query: 332 AQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
Q GL A+ + +E+ K + T ++++A + ++ LK G+ + I+ GL+S
Sbjct: 315 VQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQN--LKLGKEIQCYCIRHGLES 372
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D ++ S +DMY K GSI +++VF+ T +K W ++SA A G + F EM+
Sbjct: 373 DIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQ 432
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+ V P+ IT+ ++ RNG +++ + +F M + I P+ ++ M++ L + G
Sbjct: 433 LESVPPNVITWNLIILSLLRNGQVNEAKEMFLQM-QSSGIFPNLISWTTMMNGLVQNGCS 491
Query: 511 EEAEELVGQIPGG---PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMS 567
EEA + ++ P + L AC ++ G I +++ + + + S
Sbjct: 492 EEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSFSASIETS 551
Query: 568 --NLYAEKGD 575
++YA+ GD
Sbjct: 552 LVDMYAKCGD 561
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 182/408 (44%), Gaps = 64/408 (15%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N YCK G + A IF+ + D+V+WN ++SG+ + ++A+ M + FD
Sbjct: 280 LNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDC 339
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT ST +S + G ++ ++ GL+S++ + + + MY++ G +V A++VFD
Sbjct: 340 VTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDS 399
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
KD + WN +LS Y G G EA+ EM
Sbjct: 400 TVQKDLILWNTLLSAYADSGLSG-EALRLFYEM--------------------------- 431
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR----NVISWTTMIS 233
Q+ V +V N+++ + + +A ++F +M N+ISWTTM
Sbjct: 432 --QLESVP------PNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTM-- 481
Query: 234 MN-------REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
MN E+A+ ++M+ + PN T + A + + GR IHG I+
Sbjct: 482 MNGLVQNGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQ 541
Query: 287 LS-EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
S S+ L+ MYA+ + +E+VF C E+ +NA+IS YA G A+ +
Sbjct: 542 YSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYR 601
Query: 346 GVIKES-KPNAYTFGSVLN---------AVGAAEDISLKHGQR-CHSH 382
+ KP+ T S+L+ A+ D+ KHG + C H
Sbjct: 602 SLEDGGVKPDNITITSLLSCNYGRDVNQAIEVFSDMVSKHGMKPCLEH 649
>gi|242094978|ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
gi|241916202|gb|EER89346.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
Length = 657
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/513 (33%), Positives = 276/513 (53%), Gaps = 19/513 (3%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
LH L V G ++ +V +AL +Y + ++ +AR+VFD +P+ D++ WN +L+G G
Sbjct: 136 LHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLLAGLP--GS 193
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+EA + ++E+ R +R D + S+ A ++ +G+ +HG +K G H V
Sbjct: 194 VALEAFVRMVEVGR--VRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHVVT 251
Query: 199 VLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGVCP 253
LMS YSKC A +F RM D +++++ +IS E +V LFKE+ P
Sbjct: 252 GLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAASDWRP 311
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
N T + +I S R +H +K ++ V L T+Y R M+ + +F
Sbjct: 312 NSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIF 371
Query: 314 DELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVLNAVGAAEDI 371
D + + + SWNA+ISGYAQNGL+ AV+ F +++E +PN T S L+A +
Sbjct: 372 DAMPEKTMESWNAMISGYAQNGLTEMAVE-LFQLMQELNVQPNPTTISSTLSACAQLGAL 430
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SL G H I K L+ + V +AL+DMY K GSI E++ +F+ K+ +W A+IS
Sbjct: 431 SL--GTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMIS 488
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
HG + +K M + + P S TFLSVL C G++ +G+ +F M +Y I
Sbjct: 489 GYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYRIS 548
Query: 492 PSPDHYSCMVDMLGRVGRLEEAEELVGQIPG---GPGLSVLQSLLGACRIHGNVEMGERI 548
P +H +CMVD+LGR G+L EA +L+ + P GPG V +LL AC +H N ++ +
Sbjct: 549 PGIEHCTCMVDLLGRAGKLNEALDLISEFPQSAIGPG--VWGALLSACMVHKNSDLAKLA 606
Query: 549 ADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAI 581
+ L +++ +G YVL+SNLY K + A+
Sbjct: 607 SQKLFELDSENAGYYVLLSNLYTSKKHYSEAAV 639
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 180/374 (48%), Gaps = 33/374 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF----------EKSDDALSFALRMNL 50
M++Y K G D A +F+ + +PD+V++N ++SG+ E + + R N
Sbjct: 254 MSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAASDWRPNS 313
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE 110
+V YS HE L LH+ +VK LD++ V AL T+Y R +
Sbjct: 314 STLVAVIPVYSP-----FGHE--LLARCLHAFVVKARLDADALVSTALTTLYCRLNDMES 366
Query: 111 ARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASAC 169
AR +FD MP K SWNA++SGY Q+G E + L ++M++ ++ + + +S SAC
Sbjct: 367 ARSIFDAMPEKTMESWNAMISGYAQNG--LTEMAVELFQLMQELNVQPNPTTISSTLSAC 424
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
L LG +H + K +V V L+ Y+KC +A +F RM ++NV+SW
Sbjct: 425 AQLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWN 484
Query: 230 TMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
MIS +A+ L+K M + P TF+ +++A S G LV EG+ + + +
Sbjct: 485 AMISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRV-MTN 543
Query: 285 NFLSEPSV--CNCLITMYARFESMQDSEKVFDELSCREIIS--WNALISG---YAQNGLS 337
+ P + C C++ + R + ++ + E I W AL+S + + L+
Sbjct: 544 EYRISPGIEHCTCMVDLLGRAGKLNEALDLISEFPQSAIGPGVWGALLSACMVHKNSDLA 603
Query: 338 LAAVQAFFGVIKES 351
A Q F + E+
Sbjct: 604 KLASQKLFELDSEN 617
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 215/455 (47%), Gaps = 30/455 (6%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIG-VVFDAVTY 60
+Y K + D A +F+ + +PD + WNT+L+G S AL +RM +G V D+ T
Sbjct: 157 KLYFKLSKVDDARKVFDAVPSPDTILWNTLLAGLPGS-VALEAFVRMVEVGRVRPDSTTL 215
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+++L + G +H VK GL +V L+++YS+ G + AR +FD M +
Sbjct: 216 ASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDCARSLFDRMED 275
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDH---VSFTSAASACGHEKNLE 176
D V++NA++SGY+ +G VE+ + L E+ R + V+ S GHE
Sbjct: 276 PDLVAYNALISGYSVNG--MVESSVELFKELAASDWRPNSSTLVAVIPVYSPFGHEL--- 330
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
L + +H +K V L + Y + A +F M ++ + SW MIS
Sbjct: 331 LARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMPEKTMESWNAMISGYA 390
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ AV LF+ M+ V PN T + A + + G +H + K N
Sbjct: 391 QNGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQLGALSLGTWVHRIIAKENLELNVY 450
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V LI MYA+ S+ ++ +FD + + ++SWNA+ISGY +G A++ + ++
Sbjct: 451 VMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGRGAEALKLYKSMLDAC 510
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQR-----CHSHIIKVGLDSDPIVGSALLDMYGKR 405
P + TF SVL A + GQ+ + + I G++ + ++D+ G+
Sbjct: 511 ILPTSSTFLSVLYACSHGGLV--DEGQKVFRVMTNEYRISPGIEH----CTCMVDLLGRA 564
Query: 406 GSIFESQRVFNETQEKS--EFAWTAIISALARHGD 438
G + E+ + +E + + W A++SA H +
Sbjct: 565 GKLNEALDLISEFPQSAIGPGVWGALLSACMVHKN 599
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 194/420 (46%), Gaps = 31/420 (7%)
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL---DHVSFTSAASAC 169
R+F P D NA+L + +R L D SF AA++
Sbjct: 75 RLFRAFPRPDRFLRNALLRS---------------LPSLRPHLLFPSPDSFSFAFAATSL 119
Query: 170 GHE-----KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRN 224
++ + +HG+S+ GY V + L Y K DA KVF + +
Sbjct: 120 SSSCSSRGRDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPD 179
Query: 225 VISWTTMIS-MNREDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
I W T+++ + A+ F M G V P+ T + A + + V GR +HG +
Sbjct: 180 TILWNTLLAGLPGSVALEAFVRMVEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGV 239
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K V L+++Y++ M + +FD + +++++NALISGY+ NG+ ++V+
Sbjct: 240 KCGLAEHEHVVTGLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVE 299
Query: 343 AFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLD 400
F + +PN+ T +V+ L RC H+ ++K LD+D +V +AL
Sbjct: 300 LFKELAASDWRPNSSTLVAVIPVYSPFGHELLA---RCLHAFVVKARLDADALVSTALTT 356
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
+Y + + ++ +F+ EK+ +W A+IS A++G E + F+ M+ V+P+ T
Sbjct: 357 LYCRLNDMESARSIFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTT 416
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
S L+ C + G + G + + K+ ++E + + ++DM + G + EA + ++
Sbjct: 417 ISSTLSACAQLGALSLGTWVHRIIAKE-NLELNVYVMTALIDMYAKCGSIAEARSIFDRM 475
>gi|302823333|ref|XP_002993320.1| hypothetical protein SELMODRAFT_136907 [Selaginella moellendorffii]
gi|300138893|gb|EFJ05645.1| hypothetical protein SELMODRAFT_136907 [Selaginella moellendorffii]
Length = 504
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/504 (36%), Positives = 277/504 (54%), Gaps = 19/504 (3%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G +LH+ I G D +G AL++MY+R G L AR +FD M +D ++WNA+++ Y+
Sbjct: 6 GERLHARIEASGFDLSGNLGTALVSMYARCGGLDRARDLFDRMRKRDIIAWNAMIAAYSL 65
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVS 195
G G A+ + GL D +F S C ++++ K++HG G
Sbjct: 66 HG-RGDLALELYYRIEPAGLAPDRSTFLSTLVTC---ESIDSVKKLHGDLAARGLEREAL 121
Query: 196 VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDG 250
+GN L+S Y +C +A VF M RN ++W +I + + +A+ L K M +G
Sbjct: 122 IGNTLVSMYGRCGSLDEAMAVFVGMPYRNGVTWGILIGAHAQHGKAKEALRLLKLMDCEG 181
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS--VCNCLITMYARFESMQD 308
V + TF+ + A S + +GR IH + + E S + N L+TMY + S+ D
Sbjct: 182 VRAMENTFLTALSACSSAEFLGDGRRIHERIAASGVIDESSTRLSNALVTMYGKCGSLID 241
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSV--LNAV 365
+E VF+ L CR I+SW +LI+ YAQ+G A+Q F + E +KP+ F S+ ++A+
Sbjct: 242 AESVFNSLPCRTIVSWTSLIAAYAQHGFPRRALQIFKQMDAEGTKPDEIAFLSLTLVSAL 301
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
A ED L+ G++ H+ I GL S I G+AL++MY + G++ ++ F E + K+ +
Sbjct: 302 DACED--LREGRKIHATIAAKGLSSSVIPGTALVNMYDRCGALASARAAFEEIRGKNSIS 359
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
W AII A A GD M + M+ +GV P+ I+F VL C G I + RH F M+
Sbjct: 360 WNAIIGAYAHQGDLRESMGLLQRMDQEGVAPNVISFTCVLFACAHAGSIREARHQFHLMI 419
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
DY IEP D+Y C+VD+LGR GRL++ EEL+ +P P + SLLGAC IHG+V G
Sbjct: 420 GDYSIEPLEDNYGCLVDLLGRAGRLDKVEELIQTMPMWPSPAQWMSLLGACHIHGDVHRG 479
Query: 546 ERIADALMKMEPAGSGSYVLMSNL 569
R + + S +YV+MSNL
Sbjct: 480 VRTSRS---SNHGHSSAYVVMSNL 500
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 214/454 (47%), Gaps = 23/454 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY + G D+A +F+ + DI++WN +++ + + D AL R+ G+ D
Sbjct: 29 VSMYARCGGLDRARDLFDRMRKRDIIAWNAMIAAYSLHGRGDLALELYYRIEPAGLAPDR 88
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L C E +LH + GL+ E +GN L++MY R G L EA VF
Sbjct: 89 STFLSTLVTC---ESIDSVKKLHGDLAARGLEREALIGNTLVSMYGRCGSLDEAMAVFVG 145
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP ++ V+W ++ + Q G EA+ L M +G+R +F +A SAC + L
Sbjct: 146 MPYRNGVTWGILIGAHAQHGK-AKEALRLLKLMDCEGVRAMENTFLTALSACSSAEFLGD 204
Query: 178 GKQIHGVSIKMGY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G++IH G + + N L++ Y KC DA VF + R ++SWT++I+
Sbjct: 205 GRRIHERIAASGVIDESSTRLSNALVTMYGKCGSLIDAESVFNSLPCRTIVSWTSLIAAY 264
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIG--LIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ A+ +FK+M +G P+++ F+ L+ A+ ++EGR IH S
Sbjct: 265 AQHGFPRRALQIFKQMDAEGTKPDEIAFLSLTLVSALDACEDLREGRKIHATIAAKGLSS 324
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
L+ MY R ++ + F+E+ + ISWNA+I YA G ++ +
Sbjct: 325 SVIPGTALVNMYDRCGALASARAAFEEIRGKNSISWNAIIGAYAHQGDLRESMGLLQRMD 384
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS--ALLDMYGKR 405
+E PN +F VL A A I R H++ +P+ + L+D+ G+
Sbjct: 385 QEGVAPNVISFTCVLFACAHAGSI---REARHQFHLMIGDYSIEPLEDNYGCLVDLLGRA 441
Query: 406 GSIFESQRVFNETQE-KSEFAWTAIISALARHGD 438
G + + + + S W +++ A HGD
Sbjct: 442 GRLDKVEELIQTMPMWPSPAQWMSLLGACHIHGD 475
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
+ L G+R H+ I G D +G+AL+ MY + G + ++ +F+ +++ AW A+I
Sbjct: 1 MDLAGGERLHARIEASGFDLSGNLGTALVSMYARCGGLDRARDLFDRMRKRDIIAWNAMI 60
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
+A + HG + + + +E G+ PD TFLS L C + K L +
Sbjct: 61 AAYSLHGRGDLALELYYRIEPAGLAPDRSTFLSTLVTCESIDSVKK----LHGDLAARGL 116
Query: 491 EPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
E + +V M GR G L+EA + +P G++ L+GA HG + R+
Sbjct: 117 EREALIGNTLVSMYGRCGSLDEAMAVFVGMPYRNGVT-WGILIGAHAQHGKAKEALRL 173
>gi|242088973|ref|XP_002440319.1| hypothetical protein SORBIDRAFT_09g029650 [Sorghum bicolor]
gi|241945604|gb|EES18749.1| hypothetical protein SORBIDRAFT_09g029650 [Sorghum bicolor]
Length = 671
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/554 (34%), Positives = 286/554 (51%), Gaps = 25/554 (4%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL 155
AL Y++ G L A +V DE P K+ VSW +++ + G +A+ EM G+
Sbjct: 100 TALADAYAKAGSLELALQVLDETPCKNVVSWTTLVASLARGGRRH-DALRRFAEMRASGV 158
Query: 156 RLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANK 215
D + +A +AC G+++H + K+G V N L + Y++C A
Sbjct: 159 DCDSHACAAALTACAGAGLRARGREVHALCAKLGLDAVPFVANALAALYARCGDVDRALA 218
Query: 216 VFRRMHDRNVISWTTMISM-----NREDAVSLFKEM----RLDGVCPNDVTFIGLIHAIS 266
RM R+V +WTT+I+ E+A+ F M + PN+ TF +I A
Sbjct: 219 AVGRMGTRDVAAWTTLIASYVQTGRAEEAIEAFVRMLRNESSNSASPNEYTFSAVIAACP 278
Query: 267 IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNA 326
G +H + SV N L+ +YAR + ++ +F E + ++++SW+
Sbjct: 279 NIERAYLGEQLHAQAARRGLSHTRSVANSLVKLYARRGRLSAADAIFRENAVKDVVSWST 338
Query: 327 LISGYAQNGLSLAAVQAFFGVIKE-------SKPNAYTFGSVLNAVGAAEDISLKHGQRC 379
+ISGYAQ GL V+ F + E +PN +T S+ + +A SL G++
Sbjct: 339 IISGYAQEGL----VEESFALFSEMRHHSSCPRPNEFTLASLFSVCASA--ASLYAGRQL 392
Query: 380 HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDY 439
H+ + GL+ +V SAL++MYGK GS+ ++ +F+ +WTA+I A HG
Sbjct: 393 HALAVAAGLEHHAMVRSALVNMYGKSGSMTDANVIFSSRTRDDVISWTAMIVGHAEHGHS 452
Query: 440 ESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC 499
+ F+EM G++PD +TF+ VLT C G + G ++M K Y +EP +HY C
Sbjct: 453 KEAFQLFEEMCRVGLKPDHVTFIGVLTACSHAGEVELGLRYLNAMNKCYVVEPEKEHYGC 512
Query: 500 MVDMLGRVGRLEEAEELVGQIPG-GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPA 558
+VD+L R GR+ EAEEL+G+I G V SLL AC G E G++ A+ +M+ EP
Sbjct: 513 VVDLLARAGRIHEAEELIGRIAADGRDGVVWTSLLRACAARGAEETGKKAAERMMEAEPW 572
Query: 559 GSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADV-GDIDGLHGFSSGDNT 617
GSG++V M+NLYA KG W A R MK KGV K G+S +V GD G+ F SGD T
Sbjct: 573 GSGAHVAMANLYASKGQWREAAQERHLMKQKGVLKGAGWSSVEVGGDDRGVGVFVSGDRT 632
Query: 618 HPRSEEIYRMAECL 631
+P IY M E +
Sbjct: 633 NPHDNAIYMMLELI 646
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 217/458 (47%), Gaps = 21/458 (4%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAV 58
+ Y K+G + AL + + ++VSW T+++ + DAL M GV D+
Sbjct: 104 DAYAKAGSLELALQVLDETPCKNVVSWTTLVASLARGGRRHDALRRFAEMRASGVDCDSH 163
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
+ AL+ C G ++H+L K GLD+ +V NAL +Y+R G + A M
Sbjct: 164 ACAAALTACAGAGLRARGREVHALCAKLGLDAVPFVANALAALYARCGDVDRALAAVGRM 223
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR----KGLRLDHVSFTSAASACGHEKN 174
+D +W +++ Y Q G EAI A + M+R + +F++ +AC + +
Sbjct: 224 GTRDVAAWTTLIASYVQTGR-AEEAIEAFVRMLRNESSNSASPNEYTFSAVIAACPNIER 282
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
LG+Q+H + + G SV N L+ Y++ A+ +FR ++V+SW+T+IS
Sbjct: 283 AYLGEQLHAQAARRGLSHTRSVANSLVKLYARRGRLSAADAIFRENAVKDVVSWSTIISG 342
Query: 235 NR-----EDAVSLFKEMRLDGVC--PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
E++ +LF EMR C PN+ T L + + GR +H L +
Sbjct: 343 YAQEGLVEESFALFSEMRHHSSCPRPNEFTLASLFSVCASAASLYAGRQLHALAVAAGLE 402
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
V + L+ MY + SM D+ +F + ++ISW A+I G+A++G S A Q F +
Sbjct: 403 HHAMVRSALVNMYGKSGSMTDANVIFSSRTRDDVISWTAMIVGHAEHGHSKEAFQLFEEM 462
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKR 405
+ KP+ TF VL A A ++ L G R + + K ++ + ++D+ +
Sbjct: 463 CRVGLKPDHVTFIGVLTACSHAGEVEL--GLRYLNAMNKCYVVEPEKEHYGCVVDLLARA 520
Query: 406 GSIFESQRVFNETQE--KSEFAWTAIISALARHGDYES 441
G I E++ + + WT+++ A A G E+
Sbjct: 521 GRIHEAEELIGRIAADGRDGVVWTSLLRACAARGAEET 558
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 180/429 (41%), Gaps = 38/429 (8%)
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL----RLDHVSFTSAASACGHEK 173
MP++D V++ +LSGY D+ +AL R D + AC
Sbjct: 1 MPHRDEVAYATLLSGYAMAADF--PGAMALFSRFRASYPPHAAADPFILSPVLKACASAS 58
Query: 174 NLELGKQIHGV-----------------SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
V ++ + V V L Y+K A +V
Sbjct: 59 ASAAAGAGASVGLLHLPQAAAAAALHAFAVHSSAVSSVFVSTALADAYAKAGSLELALQV 118
Query: 217 FRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
+NV+SWTT+++ R DA+ F EMR GV + + A + L
Sbjct: 119 LDETPCKNVVSWTTLVASLARGGRRHDALRRFAEMRASGVDCDSHACAAALTACAGAGLR 178
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
GR +H LC K + P V N L +YAR + + + R++ +W LI+ Y
Sbjct: 179 ARGREVHALCAKLGLDAVPFVANALAALYARCGDVDRALAAVGRMGTRDVAAWTTLIASY 238
Query: 332 AQNGLSLAAVQAFFGVIK-----ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV 386
Q G + A++AF +++ + PN YTF +V+ A E L G++ H+ +
Sbjct: 239 VQTGRAEEAIEAFVRMLRNESSNSASPNEYTFSAVIAACPNIERAYL--GEQLHAQAARR 296
Query: 387 GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQF 446
GL V ++L+ +Y +RG + + +F E K +W+ IIS A+ G E F
Sbjct: 297 GLSHTRSVANSLVKLYARRGRLSAADAIFRENAVKDVVSWSTIISGYAQEGLVEESFALF 356
Query: 447 KEMENKG--VRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDML 504
EM + RP+ T S+ +VC ++ GR L ++ +E S +V+M
Sbjct: 357 SEMRHHSSCPRPNEFTLASLFSVCASAASLYAGRQLH-ALAVAAGLEHHAMVRSALVNMY 415
Query: 505 GRVGRLEEA 513
G+ G + +A
Sbjct: 416 GKSGSMTDA 424
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 6/183 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK-----SDDALSFALRMNLIGVVF 55
+ +Y + G+ A IF D+VSW+T++SG+ + AL +R +
Sbjct: 309 VKLYARRGRLSAADAIFRENAVKDVVSWSTIISGYAQEGLVEESFALFSEMRHHSSCPRP 368
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
+ T ++ S C G QLH+L V GL+ V +AL+ MY + G + +A +F
Sbjct: 369 NEFTLASLFSVCASAASLYAGRQLHALAVAAGLEHHAMVRSALVNMYGKSGSMTDANVIF 428
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
D +SW A++ G+ + G + EA EM R GL+ DHV+F +AC H +
Sbjct: 429 SSRTRDDVISWTAMIVGHAEHG-HSKEAFQLFEEMCRVGLKPDHVTFIGVLTACSHAGEV 487
Query: 176 ELG 178
ELG
Sbjct: 488 ELG 490
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+NMY KSG A IF++ D++SW ++ G + S +A M +G+ D
Sbjct: 412 VNMYGKSGSMTDANVIFSSRTRDDVISWTAMIVGHAEHGHSKEAFQLFEEMCRVGLKPDH 471
Query: 58 VTYSTALSFCLDHEGFL-FGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT+ L+ C H G + GL+ L+++ + ++ E ++ + +R GR+ EA +
Sbjct: 472 VTFIGVLTAC-SHAGEVELGLRYLNAMNKCYVVEPEKEHYGCVVDLLARAGRIHEAEELI 530
Query: 116 DEMP--NKDSVSWNAILSGYTQDG 137
+ +D V W ++L G
Sbjct: 531 GRIAADGRDGVVWTSLLRACAARG 554
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 276/487 (56%), Gaps = 11/487 (2%)
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
D + + C K L G+ +H ++ + + +GN L++ Y+KC +A KVF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 218 RRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
+M R+ ++WTT+IS + DA+ F +M G PN+ T +I A +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G +HG C+K F S V + L+ +Y R+ M D++ VFD L R +SWNALI+G+A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 333 QNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
+ + A++ F G++++ +P+ +++ S+ A + L+ G+ H+++IK G
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTG--FLEQGKWVHAYMIKSGEKLV 296
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
G+ LLDMY K GSI +++++F+ ++ +W ++++A A+HG + + F+EM
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
G+RP+ I+FLSVLT C +G++ +G H ++ M KD I P HY +VD+LGR G L
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLN 415
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
A + ++P P ++ ++LL ACR+H N E+G A+ + +++P G +V++ N+YA
Sbjct: 416 RALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYA 475
Query: 572 EKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
G W A +RK MK GV+KE SW ++ + +H F + D HP+ EEI R E +
Sbjct: 476 SGGRWNDAARVRKKMKESGVKKEPACSWVEIE--NAIHMFVANDERHPQREEIARKWEEV 533
Query: 632 GSEMKYL 638
+++K L
Sbjct: 534 LAKIKEL 540
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 206/392 (52%), Gaps = 10/392 (2%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D Y+T L C + + G +H+ I++ ++ +GN L+ MY++ G L EAR+VF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
++MP +D V+W ++SGY+Q D +A+L +M+R G + + +S A E+
Sbjct: 119 EKMPQRDFVTWTTLISGYSQH-DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G Q+HG +K G+ ++V VG+ L+ Y++ + DA VF + RN +SW +I+ +
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E A+ LF+ M DG P+ ++ L A S +++G+ +H IK+
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
N L+ MYA+ S+ D+ K+FD L+ R+++SWN+L++ YAQ+G AV F + +
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+PN +F SVL A + L G + + K G+ + ++D+ G+ G +
Sbjct: 358 GIRPNEISFLSVLTA--CSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Query: 410 ESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ R E E + W A+++A H + E
Sbjct: 416 RALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 225/483 (46%), Gaps = 63/483 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K G ++A +F + D V+W T++SG+ + D DAL F +M G +
Sbjct: 102 LNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNE 161
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ + G QLH VK G DS V+VG+AL+ +Y+R+G + +A+ VFD
Sbjct: 162 FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDA 221
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIE-MMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +++ VSWNA+++G+ + G E L L + M+R G R H S+ S AC LE
Sbjct: 222 LESRNDVSWNALIAGHARRS--GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLE 279
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
GK +H IK G GN L+ Y+K DA K+F R+ R+V+SW ++++
Sbjct: 280 QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYA 339
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +AV F+EMR G+ PN+++F+ ++ A S L+ EG + L K + E
Sbjct: 340 QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAW 399
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
++ + R + + + +E+
Sbjct: 400 HYVTVVDLLGRAGDLNRALRFIEEMPI--------------------------------- 426
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P A + ++LNA ++ L G H+ ++ D DP L ++Y G ++
Sbjct: 427 EPTAAIWKALLNACRMHKNTEL--GAYAAEHVFELDPD-DPGPHVILYNIYASGGRWNDA 483
Query: 412 QRVFNETQE---KSEFA--WTAIISAL-------ARHGDYESVMNQFKEMENK----GVR 455
RV + +E K E A W I +A+ RH E + +++E+ K G
Sbjct: 484 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYV 543
Query: 456 PDS 458
PD+
Sbjct: 544 PDT 546
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 191/640 (29%), Positives = 329/640 (51%), Gaps = 28/640 (4%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFALRMNLI--GVVFDAVT 59
MY + G + A+ +F+ + + IV W ++S + + A + AL ++ G+ DA+
Sbjct: 71 MYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIV 130
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ + LS C E G +H V+ GL + V +AL++MY R G L +A +F +
Sbjct: 131 FVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLE 190
Query: 120 NK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
D V WNA+++ +Q+G EA+ M++ G+ D V+F S AC +L
Sbjct: 191 RHLDVVLWNAMITANSQNGS-PREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRAS 249
Query: 179 --KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
K H + G G+ V V L++ Y++C A + F M +RN +SWT+MI+
Sbjct: 250 QVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFA 309
Query: 237 ED----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ AV F M L+GV P T L A+ + R++ + + ++ ++
Sbjct: 310 QIGHLLAVETFHAMLLEGVVPTRST---LFAALEGCEDLHTARLVEAIAQEIGVATDVAI 366
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNA-----LISGYAQNGLSLAAVQAFFGV 347
L+ YAR + +D+ +VF S RE W+A +I+ YAQ + + +
Sbjct: 367 VTDLVMAYARCDGQEDAIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAA 423
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKR 405
I+ P+ + + L+A A +L G++ H+ + LD D +G+A++ MYG+
Sbjct: 424 IERGISPDRILYITALDAC--ASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQC 481
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GS+ +++ F+ + E +W A++SA A+HG E + F+ M +G + + FL++L
Sbjct: 482 GSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLL 541
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
+ C G++ G F +M D+ + P+ +HY CMVD+LGR GRL +A +V +P P
Sbjct: 542 SACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPD 601
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ +L+GACRI+G+ E G A+ ++++ + +YV + N+Y+ G WE A +RK
Sbjct: 602 AATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKI 661
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
M G+RK G S ++ +H F D +HP+SE IY
Sbjct: 662 MADLGLRKIPGVSSIEIR--SKVHEFVVRDRSHPQSEAIY 699
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 219/462 (47%), Gaps = 19/462 (4%)
Query: 93 YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR 152
Y+ ++L+ MY R G L A VF ++ +K V W ++S Y G + AI +++
Sbjct: 63 YLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRG-HSAAAIALFHRILQ 121
Query: 153 KGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGD 212
+G+ LD + F S SAC E+ L G+ IH +++ G G V + L+S Y +C D
Sbjct: 122 EGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRD 181
Query: 213 ANKVFRRMHDR-NVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAIS 266
AN +F + +V+ W MI+ N + +A+ +F M G+ P+ VTF+ + A S
Sbjct: 182 ANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACS 241
Query: 267 IGNLVKEGRM--IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
++ ++ H +T S+ V L+ YAR + + + F + R +SW
Sbjct: 242 SSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSW 301
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII 384
++I+ +AQ G L AV+ F ++ E T ++ A+ ED+ H R I
Sbjct: 302 TSMIAAFAQIG-HLLAVETFHAMLLEGVVP--TRSTLFAALEGCEDL---HTARLVEAIA 355
Query: 385 K-VGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW--TAIISALARHGDYES 441
+ +G+ +D + + L+ Y + ++ RVF+ +E A TA+I+ A+ D S
Sbjct: 356 QEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRS 415
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+ +G+ PD I +++ L C + +GR + + D ++ + +V
Sbjct: 416 TFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIV 475
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
M G+ G L +A + +P +S ++L A HG VE
Sbjct: 476 SMYGQCGSLRDARDAFDGMPARDEIS-WNAMLSASAQHGRVE 516
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 129/287 (44%), Gaps = 20/287 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFAL--RMNLIGVVFDAV 58
+N Y + G+ D A F + + VSW ++++ F + L+ M L GVV
Sbjct: 274 VNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLLAVETFHAMLLEGVVPTRS 333
Query: 59 TYSTALSFCLD-HEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD- 116
T AL C D H L + ++ + G+ ++V + L+ Y+R +A RVF
Sbjct: 334 TLFAALEGCEDLHTARL----VEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSA 389
Query: 117 -EMPNKDSVSWNAILSGYTQDGDYGVEAIL--ALIEMMRKGLRLDHVSFTSAASACGHEK 173
E D+ A+++ Y Q D L A IE +G+ D + + +A AC
Sbjct: 390 REEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIE---RGISPDRILYITALDACASLA 446
Query: 174 NLELGKQIHG-VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
L G+QIH V+ V++GN ++S Y +C DA F M R+ ISW M+
Sbjct: 447 ALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAML 506
Query: 233 SMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
S + ED LF+ M +G V F+ L+ A + LV+ G
Sbjct: 507 SASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAG 553
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D + S+L+ MY + GS+ + VF++ KS WT +ISA G + + F +
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+G+ D+I F+SVL+ C + GR L + + S +V M GR G L
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGR-LIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179
Query: 511 EEAEELVGQI 520
+A L G +
Sbjct: 180 RDANALFGHL 189
>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
Length = 734
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 174/581 (29%), Positives = 307/581 (52%), Gaps = 21/581 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ MY + G + + IF+ + ++VSWN ++S F + D AL RM + +
Sbjct: 155 VTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPEQALELYHRMKRERLEPNG 214
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+++ L+ C G +H I GL ++ + NALI MYS+ G + EA VF
Sbjct: 215 FVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSG 274
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +D +W ++++GY Q G +G EA M R + +F + SAC LE
Sbjct: 275 LATRDVFTWTSMIAGYAQLG-FGSEAFAFYDRMRRDCVSPTSATFVALLSACS---TLEQ 330
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
GK +H G+ + V LM YS+C DA +F +M ++ +SW+ M++ + +
Sbjct: 331 GKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQ 390
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
A++LF++M L+G+ + TF + A S+ + + I L + S+
Sbjct: 391 FGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSI 450
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
L++ Y++ M+++ K+FD + R++++W +I GYAQ G S AA++ F + E
Sbjct: 451 RADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGV 510
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIFE 410
+P++ TF SVL A ED G+ H+ I+ G +G+ L++MY + GS+ +
Sbjct: 511 EPDSVTFSSVLQACSNLED-----GREVHARILAAQGGKMSDFLGNGLINMYARCGSMRD 565
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++++F S +W+AI++ ARHG ++ +++ ++ M N+GV PD +T +++L C
Sbjct: 566 ARQIFESMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSH 625
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G+ + H F ++ D+ + +HY CMVD+L R GRL+EAEEL+ I P + L
Sbjct: 626 AGLTDEACHYFTWIISDFELPHLDEHYQCMVDLLCRAGRLDEAEELISMI-DRPDVVTLN 684
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
++L AC+ ++ G R A A M+ + + +VL+S +YA
Sbjct: 685 TMLAACKNQQDLHRGARTA-AQMQSTESCAAPFVLLSQIYA 724
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/551 (28%), Positives = 278/551 (50%), Gaps = 23/551 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY K G A F+ + + + WN ++SG+ +S +AL +M++ F
Sbjct: 56 VQMYAKCGCLADAKAAFDEIADKNDFVWNLMISGYARSGKNREALELFHKMDIPPNGF-- 113
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKF-GLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+++AL+ C G ++H +++ + S+V V N+L+TMY+R G ++E ++FD
Sbjct: 114 -IFASALAACAGLGDLEQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFD 172
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP K+ VSWNA++S + Q DY +A+ M R+ L + F S +AC NL+
Sbjct: 173 AMPRKNLVSWNAMISAFVQ-CDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLQ 231
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
LG IH +G + + N L++ YSKC +A +VF + R+V +WT+MI+
Sbjct: 232 LGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYA 291
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +A + + MR D V P TF+ L+ A S +++G+ +H F S
Sbjct: 292 QLGFGSEAFAFYDRMRRDCVSPTSATFVALLSACST---LEQGKHLHEEVKAFGFESITV 348
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+ MY+R S++D+E +F ++ ++ +SW+A+++ +AQ G A+ F +I E
Sbjct: 349 VETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEG 408
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + TF S L A D L R I G+D + + L+ Y K G + E
Sbjct: 409 MQLSLPTFCSALQACSLKRDSRLSKTIR--ELIDWSGIDKMDSIRADLVSAYSKCGDMEE 466
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++++F+ + + WT +I A+ GD ++ + F M+ +GV PDS+TF SVL C
Sbjct: 467 ARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN 526
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+ GR + +L + S + +++M R G + +A ++ + +S
Sbjct: 527 ---LEDGREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRIS-WS 582
Query: 531 SLLGACRIHGN 541
+++ C HG
Sbjct: 583 AIMTLCARHGQ 593
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 146/549 (26%), Positives = 265/549 (48%), Gaps = 57/549 (10%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y+ L C G +LH + + G Y+ ++ MY++ G L +A+ FDE+
Sbjct: 17 YARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIA 76
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+K+ WN ++SGY + G EA+ +M + + F SA +AC +LE G+
Sbjct: 77 DKNDFVWNLMISGYARSGK-NREALELFHKM---DIPPNGFIFASALAACAGLGDLEQGR 132
Query: 180 QIHGVSIK-MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM---- 234
+IH ++ + V V N L++ Y++C + K+F M +N++SW MIS
Sbjct: 133 EIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQC 192
Query: 235 -NREDAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPSV 292
E A+ L+ M+ + + PN F L+ A S+GNL + G IH + +
Sbjct: 193 DYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNL-QLGSSIHQRITSLGLQRDIVM 251
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI MY++ M ++ +VF L+ R++ +W ++I+GYAQ G A AF+ ++
Sbjct: 252 ENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAF-AFYDRMRRDC 310
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
P + TF ++L+A +L+ G+ H + G +S +V +AL+ MY + GS+ +
Sbjct: 311 VSPTSATFVALLSACS-----TLEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLED 365
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ +F + Q+K +W+A++++ A+ GD + F++M +G++ TF S L C
Sbjct: 366 AEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQAC-- 423
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
S+ +D + + ++D G + +++ S+
Sbjct: 424 ------------SLKRDSRLSKTIRE---LIDWSG-IDKMD---------------SIRA 452
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
L+ A G++E +I D +ME ++ +M YA++GD + L MK +G
Sbjct: 453 DLVSAYSKCGDMEEARKIFD---RMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEG 509
Query: 591 VRKE-VGFS 598
V + V FS
Sbjct: 510 VEPDSVTFS 518
>gi|297799986|ref|XP_002867877.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313713|gb|EFH44136.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 760
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 322/624 (51%), Gaps = 52/624 (8%)
Query: 1 MNMYCKSG-QFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFD 56
++MY K G D + +F +L+ P+ VS+ TV+SG + + L L+ GV D
Sbjct: 166 LSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVD 225
Query: 57 AVTYSTALSFCLDHEGF---------LFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
V S LS + EG + G Q+HSL ++ G E+++ N+L+ +Y++
Sbjct: 226 CVCLSNILSISVPREGCDSLSEIYGNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKD 285
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAA 166
+ A +F EMP + VSWN +++G+ Q+ Y + + ++ MR G + V+ S
Sbjct: 286 MNGAELIFTEMPEVNVVSWNIMIAGFGQE--YRSDKSIEYLKRMRDSGFEPNEVTCISIL 343
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
AC ++E G++I + VS N ++S YS E
Sbjct: 344 GACFRSGDVETGRRIFNTIPQ----PSVSAWNAMLSGYSNYE------------------ 381
Query: 227 SWTTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
+ E+A++ F++M+ + P+ T ++ + + ++ G+ IHG+ I+T
Sbjct: 382 --------HYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTET 433
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDE-LSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ + + LI +Y+ E M+ E +FD+ ++ +I WN++ISG +N L A+ F
Sbjct: 434 SEDSHIVSGLIAVYSECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFR 493
Query: 346 GVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + S PN T+ VL + + SL HG++ H ++K G SD V +A+ DMY
Sbjct: 494 RMHQTSVLLPNETTYAIVLGS--CSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYC 551
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G I +++ F+ K+ W +I A +G + ++ ++EM + G +PD ITF+S
Sbjct: 552 KCGEIESARQFFDTVSRKNTVIWNEMIHGYAHNGRGDEAVDLYREMISAGEKPDGITFVS 611
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VLT C +G++ G + SM +D+ IEP DHY C+VD LGR GRLE+AE L P
Sbjct: 612 VLTACSHSGLVDTGLEILSSMQRDHGIEPELDHYICIVDCLGRAGRLEDAETLAEATPYK 671
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
+ + LL +CR++G+V + R+A+ LM ++P S +YVL+SN Y+ W+ A L+
Sbjct: 672 SSSVLWEILLSSCRVYGDVSLARRVAEKLMHLDPQNSAAYVLLSNTYSSVRQWDDAAALQ 731
Query: 584 KGMKSKGVRKEVGFSWADVG-DID 606
+ M V K G SW G D+D
Sbjct: 732 ELMNKNRVHKTPGHSWITYGNDLD 755
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 138/543 (25%), Positives = 248/543 (45%), Gaps = 64/543 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS-----GFEKSDDALSFALRMNLIGVVF 55
+ CK G ++A +F+ + D+VSWN ++S GFE + AL RM G +
Sbjct: 65 LTFRCKVGDLEEACEVFDGMPERDVVSWNNMISVLVRKGFE--EKALDVYGRMVGDGFLP 122
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE-ARRV 114
T ++ LS C + + G++ H + VK GLD ++VGNAL++MY++ G +V+ RV
Sbjct: 123 SRFTLASVLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRV 182
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
F+ + + VS+ ++SG ++ +EA+ M KG+++D V ++ S +
Sbjct: 183 FESLSEPNEVSFTTVISGLARENKV-LEAVHMFRLMCEKGVQVDCVCLSNILSISVPREG 241
Query: 175 LE---------LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
+ LGKQIH ++++ G+ + + N L+ Y+K + A +F M + NV
Sbjct: 242 CDSLSEIYGNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNV 301
Query: 226 ISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+SW MI+ + ++ K MR G PN+VT I ++ A V+ GR I
Sbjct: 302 VSWNIMIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGRRIF-- 359
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
N + +PSV +WNA++SGY+ A
Sbjct: 360 ----NTIPQPSVS-----------------------------AWNAMLSGYSNYEHYEEA 386
Query: 341 VQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
+ F + + KP+ T +L++ A L+ G++ H I+ D + S L+
Sbjct: 387 INNFRQMQFQNLKPDRTTLSVILSS--CARLRFLEGGKQIHGVAIRTETSEDSHIVSGLI 444
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGV-RPD 457
+Y + + + +F++ + + A W ++IS L R+ + F+ M V P+
Sbjct: 445 AVYSECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLPN 504
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
T+ VL C R + GR ++K ++ S + + DM + G +E A +
Sbjct: 505 ETTYAIVLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVE-TAVTDMYCKCGEIESARQFF 563
Query: 518 GQI 520
+
Sbjct: 564 DTV 566
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 212/445 (47%), Gaps = 89/445 (20%)
Query: 85 KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY--GVE 142
+ GL+S+ Y+ N L+ +Y +G AR++FDEM +D SWNA L+ + GD E
Sbjct: 20 RTGLNSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDLEEACE 79
Query: 143 AILALIE------------MMRKGLR---LD-------------HVSFTSAASACGHEKN 174
+ E ++RKG LD + S SAC ++
Sbjct: 80 VFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSACSKVQD 139
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN-KVFRRMHDRNVISWTTMIS 233
+G + HGV++K G ++ VGN L+S Y+KC D +VF + + N +S+TT+IS
Sbjct: 140 GVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVIS 199
Query: 234 -MNRE----DAVSLFKEM-----RLDGVCPNDVTFIGL----IHAIS--IGNLVKEGRMI 277
+ RE +AV +F+ M ++D VC +++ I + ++S GN++ G+ I
Sbjct: 200 GLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVL--GKQI 257
Query: 278 HGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS 337
H L ++ F+ E + N L+ +YA+ + M +E +F E+ ++SWN +I+G+ Q S
Sbjct: 258 HSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYRS 317
Query: 338 LAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
+++ + +++S +PN T S+L A C
Sbjct: 318 DKSIE-YLKRMRDSGFEPNEVTCISILGA--------------CF--------------- 347
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+ G + +R+FN + S AW A++S + + YE +N F++M+ + ++
Sbjct: 348 --------RSGDVETGRRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLK 399
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHL 480
PD T +L+ C R + G+ +
Sbjct: 400 PDRTTLSVILSSCARLRFLEGGKQI 424
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 170/420 (40%), Gaps = 53/420 (12%)
Query: 187 KMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN----------- 235
+ G + + N L+ Y + A K+F M R+V SW ++
Sbjct: 20 RTGLNSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDLEEACE 79
Query: 236 -------------------------REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNL 270
E A+ ++ M DG P+ T ++ A S
Sbjct: 80 VFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSACSKVQD 139
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD-SEKVFDELSCREIISWNALIS 329
G HG+ +KT V N L++MYA+ M D +VF+ LS +S+ +IS
Sbjct: 140 GVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVIS 199
Query: 330 GYAQNGLSLAAVQAF-FGVIKESKPNAYTFGSVLNAVGAAEDI-SLKH------GQRCHS 381
G A+ L AV F K + + ++L+ E SL G++ HS
Sbjct: 200 GLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQIHS 259
Query: 382 HIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
++ G + + ++LL++Y K + ++ +F E E + +W +I+ + +
Sbjct: 260 LALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYRSDK 319
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+ K M + G P+ +T +S+L C R+G + GR +F+++ +PS ++ M+
Sbjct: 320 SIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGRRIFNTI-----PQPSVSAWNAML 374
Query: 502 DMLGRVGRLEEAEELVGQIPG---GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPA 558
EEA Q+ P + L +L +C +E G++I ++ E +
Sbjct: 375 SGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETS 434
>gi|242043708|ref|XP_002459725.1| hypothetical protein SORBIDRAFT_02g009440 [Sorghum bicolor]
gi|241923102|gb|EER96246.1| hypothetical protein SORBIDRAFT_02g009440 [Sorghum bicolor]
Length = 691
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 182/557 (32%), Positives = 294/557 (52%), Gaps = 47/557 (8%)
Query: 126 WNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
+N ++S G A+ A EM+ K + D ++ AC NL LG+ +H
Sbjct: 126 YNVLISACLSHG-LPRHALAAYQEMIDKDAVPPDAFTYPKVLRACAETANLALGRAVHVR 184
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDA 239
+ G H+ N L+S Y+KC A VF M R+V+SW +MIS +A
Sbjct: 185 AADAGMDGHLFCQNALVSMYAKCGDVVAARGVFEGMEHRDVVSWNSMISGYAASGQWREA 244
Query: 240 VSLFKEMRLDGVCPNDVTF----------------IGLI-------------------HA 264
V LF+ M+ +G N VT+ +GLI +A
Sbjct: 245 VELFRRMQAEGAEVNSVTWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNA 304
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
S ++ G+ IHGL ++ SV N +ITMYAR M+ + +F + C +++W
Sbjct: 305 CSRAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCNDMEHALMLFRMMRCPGLVAW 364
Query: 325 NALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
N +I+G+A + + AA + F ++ + +PN T + L A +L+HG+ H+HI
Sbjct: 365 NTMIAGFALSDDAEAASRIFREMVCSDVQPNYVTVVTYLAL--CARVANLQHGRELHTHI 422
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
IK G ++ ++L+DMY K G + +Q VF+ + ++T++I+ G +
Sbjct: 423 IKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDHDMISFTSMIAGFGMQGKGIVSL 482
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
FK M + G+ PD+I ++VL+ C +G++ +G LFD M+K Y I+P +HYSCMVD+
Sbjct: 483 RFFKRMIDSGIMPDAIIMVTVLSACSHSGLVDEGEELFDKMVKSYGIKPQMEHYSCMVDL 542
Query: 504 LGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSY 563
R G LE+AEEL+ Q P P +++ +L+GAC GN+ +GER A L++M+ +G Y
Sbjct: 543 YARAGLLEKAEELLNQTPFPPTSTMVAALVGACHEQGNIIIGERSARRLLEMKTDNAGHY 602
Query: 564 VLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEE 623
VL++N+YA G W +A +RK M+ GV K G +WAD+G +G F GD ++P + E
Sbjct: 603 VLIANMYAAAGCWNELATVRKLMRDLGVMKAPGLAWADLG--NGFTPFLVGDRSNPLAPE 660
Query: 624 IYRMAECLGSEMKYLNS 640
IY + + L +M+ +N+
Sbjct: 661 IYEVLDELTEQMRSMNN 677
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 197/409 (48%), Gaps = 45/409 (11%)
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
V DA TY L C + G +H G+D ++ NAL++MY++ G +V A
Sbjct: 154 AVPPDAFTYPKVLRACAETANLALGRAVHVRAADAGMDGHLFCQNALVSMYAKCGDVVAA 213
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDY-------------GVE---------------- 142
R VF+ M ++D VSWN+++SGY G + G E
Sbjct: 214 RGVFEGMEHRDVVSWNSMISGYAASGQWREAVELFRRMQAEGAEVNSVTWNTIAGGYIQM 273
Query: 143 ----AILALI-EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
A + LI +M+R G +D V+ ++AC L LGK+IHG++++M SV
Sbjct: 274 HDYRAAVGLIRDMVRGGASIDFVTLVIGSNACSRAGWLRLGKEIHGLAVRMQCHEIDSVI 333
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVC 252
N +++ Y++C A +FR M +++W TMI S + E A +F+EM V
Sbjct: 334 NAVITMYARCNDMEHALMLFRMMRCPGLVAWNTMIAGFALSDDAEAASRIFREMVCSDVQ 393
Query: 253 PNDVTFIG-LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
PN VT + L + NL + GR +H IK F + N LI MY++ + ++
Sbjct: 394 PNYVTVVTYLALCARVANL-QHGRELHTHIIKQGFKGYRLLWNSLIDMYSKSGRLSVAQN 452
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAED 370
VFD + ++IS+ ++I+G+ G + +++ F +I P+A +VL+A +
Sbjct: 453 VFDTMDDHDMISFTSMIAGFGMQGKGIVSLRFFKRMIDSGIMPDAIIMVTVLSACSHSGL 512
Query: 371 ISLKHGQRCHSHIIK-VGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
+ G+ ++K G+ S ++D+Y + G + +++ + N+T
Sbjct: 513 V--DEGEELFDKMVKSYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQT 559
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 170/360 (47%), Gaps = 47/360 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G A +F + + D+VSWN+++SG+ S +A+ RM G ++
Sbjct: 201 VSMYAKCGDVVAARGVFEGMEHRDVVSWNSMISGYAASGQWREAVELFRRMQAEGAEVNS 260
Query: 58 VTYST-------------ALSFCLD---------------------HEGFL-FGLQLHSL 82
VT++T A+ D G+L G ++H L
Sbjct: 261 VTWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACSRAGWLRLGKEIHGL 320
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVE 142
V+ V NA+ITMY+R + A +F M V+WN +++G+ D
Sbjct: 321 AVRMQCHEIDSVINAVITMYARCNDMEHALMLFRMMRCPGLVAWNTMIAGFALSDDAEAA 380
Query: 143 AILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMS 202
+ + EM+ ++ ++V+ + + C NL+ G+++H IK G+ + + N L+
Sbjct: 381 SRI-FREMVCSDVQPNYVTVVTYLALCARVANLQHGRELHTHIIKQGFKGYRLLWNSLID 439
Query: 203 TYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNREDAVSL--FKEMRLDGVCPNDVT 257
YSK A VF M D ++IS+T+MI+ M + VSL FK M G+ P+ +
Sbjct: 440 MYSKSGRLSVAQNVFDTMDDHDMISFTSMIAGFGMQGKGIVSLRFFKRMIDSGIMPDAII 499
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV--CNCLITMYARFESMQDSEKVFDE 315
+ ++ A S LV EG + +K+ + +P + +C++ +YAR ++ +E++ ++
Sbjct: 500 MVTVLSACSHSGLVDEGEELFDKMVKS-YGIKPQMEHYSCMVDLYARAGLLEKAEELLNQ 558
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 194/487 (39%), Gaps = 86/487 (17%)
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF----RRMHDRNVI 226
H +L +G Q+HG+S+ +G + L+S YS A NV+
Sbjct: 70 HRSDLRVGLQLHGLSLSLGLSRFSLLLPRLLSFYSNHPSFLPAASSLAAGSTSPEPYNVL 129
Query: 227 SWTTMISMNREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+ A++ ++EM D V P+ T+ ++ A + + GR +H
Sbjct: 130 ISACLSHGLPRHALAAYQEMIDKDAVPPDAFTYPKVLRACAETANLALGRAVHVRAADAG 189
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
N L++MYA+ + + VF+ + R+++SWN++ISGYA +G AV+ F
Sbjct: 190 MDGHLFCQNALVSMYAKCGDVVAARGVFEGMEHRDVVSWNSMISGYAASGQWREAVELFR 249
Query: 346 GVIKE-SKPNAYTFGSVLN----------AVGAAEDIS---------------------- 372
+ E ++ N+ T+ ++ AVG D+
Sbjct: 250 RMQAEGAEVNSVTWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACSRAG 309
Query: 373 -LKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
L+ G+ H +++ V +A++ MY + + + +F + AW +I+
Sbjct: 310 WLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCNDMEHALMLFRMMRCPGLVAWNTMIA 369
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR----HLFDSMLKD 487
A D E+ F+EM V+P+ +T ++ L +C R + GR H+ K
Sbjct: 370 GFALSDDAEAASRIFREMVCSDVQPNYVTVVTYLALCARVANLQHGRELHTHIIKQGFKG 429
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEEL------------VGQIPG------------- 522
Y + ++ ++DM + GRL A+ + I G
Sbjct: 430 YRLL-----WNSLIDMYSKSGRLSVAQNVFDTMDDHDMISFTSMIAGFGMQGKGIVSLRF 484
Query: 523 ---------GPGLSVLQSLLGACRIHGNVEMGERIADALMK---MEPAGSGSYVLMSNLY 570
P ++ ++L AC G V+ GE + D ++K ++P Y M +LY
Sbjct: 485 FKRMIDSGIMPDAIIMVTVLSACSHSGLVDEGEELFDKMVKSYGIKPQME-HYSCMVDLY 543
Query: 571 AEKGDWE 577
A G E
Sbjct: 544 ARAGLLE 550
>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
Length = 826
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 181/526 (34%), Positives = 288/526 (54%), Gaps = 17/526 (3%)
Query: 83 IVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVE 142
++K G +SEV V ALI YS + + ++F++ P KD V W+A++S + G YG E
Sbjct: 115 VIKLGFESEVSVATALIGFYSDYDMGI-VWKIFNQTPIKDLVLWSAMVSACVKSGQYG-E 172
Query: 143 AILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMS 202
A M G+ +HVS S AC + L GK+IHG SIK + +V N L+
Sbjct: 173 AFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVD 232
Query: 203 TYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVT 257
Y+KC + VF ++ ++++ISWTT+I E +A F M+ ++
Sbjct: 233 MYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETI 292
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
LI AI + K G HG +K L+ S+ L+ MYA+F ++ + VFD+L+
Sbjct: 293 VQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLN 352
Query: 318 CREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNA---VGAAEDISL 373
++ ISW+A+IS +A + A++ F + + +PN TF S+L A +GA E
Sbjct: 353 KKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQE---- 408
Query: 374 KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISAL 433
G+ +H K G S+ + SAL+D+Y K G I + + +FNE K W+++I+
Sbjct: 409 -LGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGY 467
Query: 434 ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPS 493
+G + + F M GV+P+ + F+SVL+ C G+ H+G F SM + Y I P
Sbjct: 468 GLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPK 527
Query: 494 PDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR-IHGNVEMGERIADAL 552
HY+CMVD++ R G +E A + V ++P P + +LL CR HG++E+ E +A+ L
Sbjct: 528 LPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERL 587
Query: 553 MKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
+ ++P + YV++SNLYAE+G W V LRK + KG++KE+G+S
Sbjct: 588 IGLDPQNTSYYVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMGYS 633
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 222/484 (45%), Gaps = 23/484 (4%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
IFN D+V W+ ++S KS +A M GV + V+ + L C +
Sbjct: 145 IFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGA 204
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
LFG ++H +K V N+L+ MY++ + VFD++ KD +SW I+ G
Sbjct: 205 LLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRG 264
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
++ D EA A M D A + G HG +K G
Sbjct: 265 CIEN-DCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLA 323
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMR 247
VS+G L+ Y+K A VF +++ ++ ISW+ MIS++ +A+ FK+M+
Sbjct: 324 FVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQ 383
Query: 248 LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQ 307
PN++TF+ L+ A S+ + G I K +LS + + LI +Y +F +
Sbjct: 384 STDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRIN 443
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNAVG 366
+F+E+ ++++ W+++I+GY NG A++ F ++ KPN F SVL+A
Sbjct: 444 QGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACS 503
Query: 367 AAEDISLKH-GQRCHSHI-IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE-TQEKSE 423
L+H G C S + K G+ + ++D+ +RG+I + + N+ E +
Sbjct: 504 HC---GLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDK 560
Query: 424 FAWTAIISAL-ARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC----GRNGMIHKGR 478
W A+++ + HG E + + G+ P + ++ +L+ GR G + + R
Sbjct: 561 RIWGALLAGCRSTHGSIE--IAELVAERLIGLDPQNTSYYVILSNLYAEQGRWGDVERLR 618
Query: 479 HLFD 482
L D
Sbjct: 619 KLVD 622
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 9/282 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K F ++ +F+ + D++SW T++ G ++D +A RM D
Sbjct: 231 VDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADE 290
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + + FG+ H ++K GL + V +G AL+ MY+++G L A VFD+
Sbjct: 291 TIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQ 350
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ KD +SW+A++S + + A+ +M R + ++F S AC EL
Sbjct: 351 LNKKDYISWSAMISVHAH-SRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQEL 409
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
G+ I + K GY ++ + + L+ Y K +F + ++++ W++MI+ +
Sbjct: 410 GESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGL 469
Query: 235 N--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
N ++A+ F M GV PN+V FI ++ A S L EG
Sbjct: 470 NGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEG 511
>gi|224082372|ref|XP_002306667.1| predicted protein [Populus trichocarpa]
gi|222856116|gb|EEE93663.1| predicted protein [Populus trichocarpa]
Length = 630
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 187/614 (30%), Positives = 319/614 (51%), Gaps = 49/614 (7%)
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE-- 117
YS + C + F H+ ++K GL+ ++GN + +YS++G + +A +VFD+
Sbjct: 19 YSYLIDHCFSLKSLSFARITHAQLIKVGLNRHTFLGNRCLDLYSQFGNVNDALKVFDDIS 78
Query: 118 -----------------------------MPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
MP +D VSWN+++SGY G + A+
Sbjct: 79 SKNIVSWNICLKGLLKFDNLSLACSVFDDMPERDVVSWNSMISGYASRGYFDC-ALETFW 137
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT-HVSVGNVLMSTYSKC 207
EM + G+R +++ S ++ GK+IHG ++ G G +V +GN L+ Y K
Sbjct: 138 EMQKLGVRPSEFTYSILMSVVFGVRH---GKEIHGSIVRSGLGALNVVLGNSLIDMYGKF 194
Query: 208 EVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTF-IGL 261
A VF M + +VISW ++IS+ E A+ F MR G P++ + + +
Sbjct: 195 SSLDYALGVFLTMEELDVISWNSLISVCCQSGYPELALDKFCIMRSLGYSPDEFSVSVVI 254
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREI 321
+++ NL K G+ I LC+K FL + + I ++++ ++DS ++F+E +
Sbjct: 255 TSCLNLRNLEK-GKQIFALCVKVGFLCNTIISSATIDLFSKCNRLEDSVRLFEEQDQWDS 313
Query: 322 ISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCH 380
N++IS YA+ G ++ F +K+ +P +T SVL++ + L+ G + H
Sbjct: 314 AVCNSMISSYARCGFREDGLRLFVLTLKKDIRPTEFTLSSVLHSTSI---LKLEQGTQFH 370
Query: 381 SHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYE 440
S +K GL+ D IV S+L++MY K G I S ++FN+ + AW +I L +G
Sbjct: 371 SLAVKSGLELDAIVASSLVEMYSKFGFIDCSIKIFNKMVARDLIAWNTMIMGLTHNGRVF 430
Query: 441 SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCM 500
+ FKE+ G+ PD IT VL C G I +G +F SM + Y ++PS +HY+C
Sbjct: 431 EALQTFKELIRTGLPPDRITLAGVLLACSFGGFISEGMTVFSSMEERYGVKPSNEHYACF 490
Query: 501 VDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGS 560
VD+L + GRL+EA + +P P + +S+L AC IHG++++ ER+A+ LM++EP S
Sbjct: 491 VDLLCQAGRLDEALYVAESMPYEPVSLIWESILHACLIHGDLKLSERVAERLMELEPQSS 550
Query: 561 GSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPR 620
Y++++ ++ +G WE V ++K MK V K +G SW +G + ++ F++ H R
Sbjct: 551 LPYLVLARMFEIRGQWEGVVRVKKAMKRGKVEKVIGCSW--IGVKNQVYTFTADQLQHHR 608
Query: 621 SEEIYRMAECLGSE 634
+EIY + L E
Sbjct: 609 GKEIYLVLRLLNWE 622
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 215/459 (46%), Gaps = 22/459 (4%)
Query: 13 ALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLD 69
A +F+++ D+VSWN+++SG+ D AL M +GV TYS +S
Sbjct: 101 ACSVFDDMPERDVVSWNSMISGYASRGYFDCALETFWEMQKLGVRPSEFTYSILMSVVF- 159
Query: 70 HEGFLFGLQLHSLIVKFGLDS-EVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
G G ++H IV+ GL + V +GN+LI MY ++ L A VF M D +SWN+
Sbjct: 160 --GVRHGKEIHGSIVRSGLGALNVVLGNSLIDMYGKFSSLDYALGVFLTMEELDVISWNS 217
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
++S Q G Y A+ M G D S + ++C + +NLE GKQI + +K+
Sbjct: 218 LISVCCQSG-YPELALDKFCIMRSLGYSPDEFSVSVVITSCLNLRNLEKGKQIFALCVKV 276
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLF 243
G+ + + + + +SKC D+ ++F + +MIS RED + LF
Sbjct: 277 GFLCNTIISSATIDLFSKCNRLEDSVRLFEEQDQWDSAVCNSMISSYARCGFREDGLRLF 336
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
+ P + T ++H+ SI L ++G H L +K+ + V + L+ MY++F
Sbjct: 337 VLTLKKDIRPTEFTLSSVLHSTSILKL-EQGTQFHSLAVKSGLELDAIVASSLVEMYSKF 395
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVL 362
+ S K+F+++ R++I+WN +I G NG A+Q F +I+ P+ T VL
Sbjct: 396 GFIDCSIKIFNKMVARDLIAWNTMIMGLTHNGRVFEALQTFKELIRTGLPPDRITLAGVL 455
Query: 363 NAVGAAEDISLKHGQRCHSHI-IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ-E 420
A IS G S + + G+ + +D+ + G + E+ V E
Sbjct: 456 LACSFGGFIS--EGMTVFSSMEERYGVKPSNEHYACFVDLLCQAGRLDEALYVAESMPYE 513
Query: 421 KSEFAWTAIISALARHGDY---ESVMNQFKEMENKGVRP 456
W +I+ A HGD E V + E+E + P
Sbjct: 514 PVSLIWESILHACLIHGDLKLSERVAERLMELEPQSSLP 552
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 143/285 (50%), Gaps = 10/285 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K D AL +F + D++SWN+++S +S + AL M +G D
Sbjct: 188 IDMYGKFSSLDYALGVFLTMEELDVISWNSLISVCCQSGYPELALDKFCIMRSLGYSPDE 247
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ S ++ CL+ G Q+ +L VK G + +A I ++S+ RL ++ R+F+E
Sbjct: 248 FSVSVVITSCLNLRNLEKGKQIFALCVKVGFLCNTIISSATIDLFSKCNRLEDSVRLFEE 307
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
DS N+++S Y + G + + + + ++K +R + +S + K LE
Sbjct: 308 QDQWDSAVCNSMISSYARCG-FREDGLRLFVLTLKKDIRPTEFTLSSVLHSTSILK-LEQ 365
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
G Q H +++K G V + L+ YSK + K+F +M R++I+W TMI +
Sbjct: 366 GTQFHSLAVKSGLELDAIVASSLVEMYSKFGFIDCSIKIFNKMVARDLIAWNTMIMGLTH 425
Query: 235 NRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI 277
N +A+ FKE+ G+ P+ +T G++ A S G + EG +
Sbjct: 426 NGRVFEALQTFKELIRTGLPPDRITLAGVLLACSFGGFISEGMTV 470
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 276/487 (56%), Gaps = 11/487 (2%)
Query: 158 DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVF 217
D + + C K L G+ +H ++ + + +GN L++ Y+KC +A KVF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 218 RRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
+M R+ ++WTT+IS + DA+ F +M G PN+ T +I A +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G +HG C+K F S V + L+ +Y R+ M D++ VFD L R +SWNALI+G+A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 333 QNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD 391
+ + A++ F G++++ +P+ +++ S+ A + L+ G+ H+++IK G
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTG--FLEQGKWVHAYMIKSGEKLV 296
Query: 392 PIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
G+ LLDMY K GSI +++++F+ ++ +W ++++A A+HG + + F+EM
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
G+RP+ I+FLSVLT C +G++ +G H ++ M KD I P HY +VD+LGR G L
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLN 415
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
A + ++P P ++ ++LL ACR+H N E+G A+ + +++P G +V++ N+YA
Sbjct: 416 RALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYA 475
Query: 572 EKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
G W A +RK MK GV+KE SW ++ + +H F + D HP+ EEI R E +
Sbjct: 476 SGGRWNDAARVRKKMKESGVKKEPACSWVEIE--NAIHMFVANDERHPQREEIARKWEEV 533
Query: 632 GSEMKYL 638
+++K L
Sbjct: 534 LAKIKEL 540
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 206/392 (52%), Gaps = 10/392 (2%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D Y+T L C + + G +H+ I++ ++ +GN L+ MY++ G L EAR+VF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
++MP +D V+W ++SGY+Q D +A+L +M+R G + + +S A E+
Sbjct: 119 EKMPQRDFVTWTTLISGYSQH-DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G Q+HG +K G+ ++V VG+ L+ Y++ + DA VF + RN +SW +I+ +
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E A+ LF+ M DG P+ ++ L A S +++G+ +H IK+
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
N L+ MYA+ S+ D+ K+FD L+ R+++SWN+L++ YAQ+G AV F + +
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+PN +F SVL A + L G + + K G+ + ++D+ G+ G +
Sbjct: 358 GIRPNEISFLSVLTACSHSG--LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Query: 410 ESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ R E E + W A+++A H + E
Sbjct: 416 RALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 225/483 (46%), Gaps = 63/483 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K G ++A +F + D V+W T++SG+ + D DAL F +M G +
Sbjct: 102 LNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNE 161
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ + G QLH VK G DS V+VG+AL+ +Y+R+G + +A+ VFD
Sbjct: 162 FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDA 221
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIE-MMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +++ VSWNA+++G+ + G E L L + M+R G R H S+ S AC LE
Sbjct: 222 LESRNDVSWNALIAGHARRS--GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLE 279
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
GK +H IK G GN L+ Y+K DA K+F R+ R+V+SW ++++
Sbjct: 280 QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYA 339
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ +AV F+EMR G+ PN+++F+ ++ A S L+ EG + L K + E
Sbjct: 340 QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAW 399
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
++ + R + + + +E+
Sbjct: 400 HYVTVVDLLGRAGDLNRALRFIEEMPI--------------------------------- 426
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P A + ++LNA ++ L G H+ ++ D DP L ++Y G ++
Sbjct: 427 EPTAAIWKALLNACRMHKNTEL--GAYAAEHVFELDPD-DPGPHVILYNIYASGGRWNDA 483
Query: 412 QRVFNETQE---KSEFA--WTAIISAL-------ARHGDYESVMNQFKEMENK----GVR 455
RV + +E K E A W I +A+ RH E + +++E+ K G
Sbjct: 484 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYV 543
Query: 456 PDS 458
PD+
Sbjct: 544 PDT 546
>gi|413944103|gb|AFW76752.1| hypothetical protein ZEAMMB73_846363 [Zea mays]
Length = 562
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 179/551 (32%), Positives = 296/551 (53%), Gaps = 12/551 (2%)
Query: 57 AVTYSTALSFCLDHEGFLFGLQLH--SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
A YS+ L + F G +H ++I ++++ L+ YS +G + ARRV
Sbjct: 11 AALYSSLLQSSMGANAFRQGKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARRV 70
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FD MP++ VSW A++SGY ++ EA+ M+R G R + +F SA AC +
Sbjct: 71 FDGMPHRSVVSWTAMVSGYAKNS-RPQEALDLFAFMLRSGARPNQFTFGSAVRACTGARC 129
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS- 233
G+QIH + K + + V + LM + +C GDA ++F M ++++SW +++
Sbjct: 130 ARSGEQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRG 189
Query: 234 -MNRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ RE DA+ LF M DG+ P+ TF + A +++ +IH IK + E
Sbjct: 190 FVEREHCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFNVELIHACIIKLGYWDE 249
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN-GLSLAAVQAFFGVI 348
LI YA+ S+ + ++D + +++S ALISGY+ + S A++ F +
Sbjct: 250 NVAIASLIDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIH 309
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
++ + +A S+L A S+K G + H+++ K D + +AL+DMY K G
Sbjct: 310 RKGLRIDAILLSSLLGVC--ANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGE 367
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+S+R F+E ++ +WT++I++ A+HG E + F ME GV+P+ +TFLS+L+
Sbjct: 368 FLDSRRAFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSA 427
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C +GM++KG F SM+ Y I+P HYS VD+L R G+LE+A LV S
Sbjct: 428 CSHSGMMNKGMEYFTSMMSKYGIDPRFKHYSSAVDLLARGGQLEDAWMLVQNTNTECKSS 487
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
+ ++LGAC++HGN+ +GE A L+ ++P S +Y +++N+YAE WE RK +
Sbjct: 488 MYGTMLGACKVHGNMPLGETAAKNLLSIDPESSVNYAVLANMYAESHLWEDAQRTRKLLV 547
Query: 588 SKGVRKEVGFS 598
KE GFS
Sbjct: 548 ETSKGKEAGFS 558
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 221/449 (49%), Gaps = 19/449 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD------DALSFALRMNLIGVVFDA 57
Y G A +F+ + + +VSW ++SG+ K+ D +F LR G +
Sbjct: 58 YSHFGDVAAARRVFDGMPHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLRS---GARPNQ 114
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ +A+ C G Q+H+ K +++V +AL+ M+ R G + +ARR+F E
Sbjct: 115 FTFGSAVRACTGARCARSGEQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAE 174
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M KD VSWN+++ G+ + ++ +A+ M+R G+ DH +F SA ACG L
Sbjct: 175 MERKDLVSWNSLMRGFVER-EHCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFN 233
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SM 234
+ IH IK+GY L+ +Y+KC A ++ M + +++S T +I SM
Sbjct: 234 VELIHACIIKLGYWDENVAIASLIDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYSM 293
Query: 235 NR---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+R +DA+ LF ++ G+ + + L+ + +K G IH K + + +
Sbjct: 294 DRNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLA 353
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ N L+ MYA+ DS + FDE+ R +ISW +LI+ AQ+G AV F + ++
Sbjct: 354 LDNALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARMEEDG 413
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN TF S+L+A + ++ K + S + K G+D S+ +D+ + G + +
Sbjct: 414 VKPNDVTFLSLLSACSHSGMMN-KGMEYFTSMMSKYGIDPRFKHYSSAVDLLARGGQLED 472
Query: 411 S-QRVFNETQEKSEFAWTAIISALARHGD 438
+ V N E + ++ A HG+
Sbjct: 473 AWMLVQNTNTECKSSMYGTMLGACKVHGN 501
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 152/283 (53%), Gaps = 10/283 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
M+M+ + G A +F + D+VSWN+++ GF E +DAL M G++ D
Sbjct: 156 MDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRGFVEREHCNDALGLFDSMLRDGMLPDH 215
Query: 58 VTYSTALSFCLDHEGFLFGLQL-HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ +AL C LF ++L H+ I+K G E +LI Y++ L AR ++D
Sbjct: 216 FTFGSALKAC-GAISVLFNVELIHACIIKLGYWDENVAIASLIDSYAKCRSLSSARVIYD 274
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
M D VS A++SGY+ D +Y +A+ ++ RKGLR+D + +S C + +++
Sbjct: 275 SMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANVASIK 334
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
G QIH K +++ N L+ Y+K D+ + F M +RNVISWT++I+
Sbjct: 335 FGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLITSCA 394
Query: 237 -----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEG 274
EDAV+LF M DGV PNDVTF+ L+ A S ++ +G
Sbjct: 395 QHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGMMNKG 437
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 101/184 (54%), Gaps = 5/184 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK----SDDALSFALRMNLIGVVFD 56
++ Y K A I++++ PD+VS ++SG+ SDDA+ +++ G+ D
Sbjct: 257 IDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHRKGLRID 316
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
A+ S+ L C + FG Q+H+ + K ++ + NAL+ MY++ G +++RR FD
Sbjct: 317 AILLSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSRRAFD 376
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
EMPN++ +SW ++++ Q G +G +A+ M G++ + V+F S SAC H +
Sbjct: 377 EMPNRNVISWTSLITSCAQHG-FGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGMMN 435
Query: 177 LGKQ 180
G +
Sbjct: 436 KGME 439
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 182/572 (31%), Positives = 303/572 (52%), Gaps = 27/572 (4%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G+QLH + K G S+ +GN LI MY++ G L A VF M +++ VSW A++ G+ Q
Sbjct: 236 GVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQ 295
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAAS--ACGHEKNLELGKQIHGVSIKMGYGTH 193
GD L L+ MR +T +AS AC +++ G IHG+ ++ GY H
Sbjct: 296 HGD--ATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEH 353
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMISM-----NREDAVSLFKEMR 247
V + L+ YSK GDA +VF R + +W MIS + DA+ +F+EMR
Sbjct: 354 YVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMR 413
Query: 248 L------DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF--LSEPSVCNCLITM 299
D P++ TF L+ A +EG +H + F S + L+ M
Sbjct: 414 RRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDM 473
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTF 358
Y + + + +VF+ L + I W ++ G+AQ G + A++ F + ++ +A+
Sbjct: 474 YVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVL 533
Query: 359 GSVLNAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
S+ VG D +L + G++ H + +K +D G++++DMY K G E++R+F E
Sbjct: 534 SSI---VGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFRE 590
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
++ +WT +I+ L +HG + F+EM GV PD +T+L++L+ C G++ +
Sbjct: 591 IPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDEC 650
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
R F + +D + P +HY+CMVD+LGR G L EA +L+ +P P + V Q+LL ACR
Sbjct: 651 RRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACR 710
Query: 538 IHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGF 597
+H +V +G D L+ ++ +YV +SN++AE G W +R M+ +G++K+ G
Sbjct: 711 VHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRRGLKKQGGC 770
Query: 598 SWADVGDIDGLHGFSSG--DNTHPRSEEIYRM 627
SW ++G +H F G + HP++ +I R+
Sbjct: 771 SWVEIG--KEVHFFYGGGDEEAHPQAGDIRRV 800
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 220/461 (47%), Gaps = 28/461 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAV-- 58
++MY K G+ D A +F + + ++VSW ++ GF + DA + + +A
Sbjct: 259 IDMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPN 318
Query: 59 --TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T S +L C E G+ +H L V+ G + V ++L+ +YS+ GR+ +ARRVFD
Sbjct: 319 EYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFD 378
Query: 117 EMP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL------RLDHVSFTSAASAC 169
+ +WNA++SGY G +G +A+L EM R+ + D +F S AC
Sbjct: 379 CAGLGRGLATWNAMISGYAHAG-HGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKAC 437
Query: 170 GHEKNLELGKQIHGVSIKMGYGT--HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
G G Q+H G+ T + + L+ Y KC A +VF R+ +N I
Sbjct: 438 GGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQ 497
Query: 228 WTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
WTT++ + + +A+ LF+ G + ++ ++ LV++GR +H +
Sbjct: 498 WTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGV 557
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K+ ++ S N ++ MY + ++E++F E+ R ++SW +I+G ++GL AV
Sbjct: 558 KSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAV- 616
Query: 343 AFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SAL 398
A F ++ +P+ T+ ++L+A A L R + I+ P + +
Sbjct: 617 AMFEEMRAGGVEPDEVTYLALLSACSHA---GLVDECRRYFSCIRRDRTVRPKAEHYACM 673
Query: 399 LDMYGKRGSIFESQRVFNE-TQEKSEFAWTAIISALARHGD 438
+D+ G+ G + E++ + E + W ++SA H D
Sbjct: 674 VDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKD 714
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 182/375 (48%), Gaps = 27/375 (7%)
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
ASA G +L G Q+HG K+G+G+ +GN L+ Y+KC A +VF M DRNV
Sbjct: 226 ASAKG--SSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNV 283
Query: 226 ISWTTMIS--MNREDA---VSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
+SWT ++ + DA + L EMR PN+ T + A + + G IHG
Sbjct: 284 VSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHG 343
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC-REIISWNALISGYAQNGLSL 338
LC++T + V + L+ +Y++ + D+ +VFD R + +WNA+ISGYA G
Sbjct: 344 LCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGR 403
Query: 339 AAVQAFFGVI-------KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD-- 389
A+ F + + +P+ +TF S+L A G + + G + H+ + G
Sbjct: 404 DALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLG--APREGAQVHAAMAASGFSTA 461
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
S+ I+ AL+DMY K G + + +VF + K+ WT ++ A+ G + F+
Sbjct: 462 SNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRF 521
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC---MVDMLGR 506
G R D+ S++ V ++ +GR + +K P+ S +VDM +
Sbjct: 522 WRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVK----SPAGTDVSAGNSIVDMYLK 577
Query: 507 VGRLEEAEELVGQIP 521
G +EAE + +IP
Sbjct: 578 CGLPDEAERMFREIP 592
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 14/267 (5%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
L+ A + G+ ++ G +HG K F S+ + N LI MYA+ + + +VF + R
Sbjct: 223 LLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRN 282
Query: 321 IISWNALISGYAQNGLSLAAVQAFFGVIK---ESKPNAYTFGSVLNAVGAAEDISLKHGQ 377
++SW AL+ G+ Q+G + ++ G ++ E+ PN YT + L A ED+ G
Sbjct: 283 VVSWTALMVGFLQHGDATGCLR-LLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVG- 340
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA-WTAIISALARH 436
H ++ G + +V S+L+ +Y K G I +++RVF+ A W A+IS A
Sbjct: 341 -IHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHA 399
Query: 437 GDYESVMNQFKEMENKGV------RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD-YH 489
G + F+EM + +PD TF S+L CG G +G + +M +
Sbjct: 400 GHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFS 459
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ +VDM + GRL A ++
Sbjct: 460 TASNAILAGALVDMYVKCGRLPVAMQV 486
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 188/565 (33%), Positives = 289/565 (51%), Gaps = 48/565 (8%)
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
L A VF+ + + + WN +L G+ D V A+ + M+ G + SF
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSD-PVSALEMYVRMVSLGHLPNSYSFPFLLK 72
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK--------------------- 206
+C K E G+QIH +K+G G V L+S Y++
Sbjct: 73 SCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVS 132
Query: 207 CE--VTG--------DANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGV 251
C +TG A KVF + +R+V+SW MI+ E+A+ LFKEM V
Sbjct: 133 CTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNV 192
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT----NFLSEPSVCNCLITMYARFESMQ 307
P++ T + ++ A + ++ GR +H F S + N LI +Y++ ++
Sbjct: 193 RPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVE 252
Query: 308 DSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVG 366
+ +F+ LSC++++SWN LI GY L A+ F +++ + PN T SVL A
Sbjct: 253 TAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACA 312
Query: 367 AAEDISLKHGQRCHSHIIKV--GLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
I + G+ H +I K G+ ++ + ++L+DMY K G I + +VFN +S
Sbjct: 313 HLGAIDI--GRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLS 370
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
+W A+I A HG + + F M V PD ITF+ +L+ C +G++ GR +F SM
Sbjct: 371 SWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSM 430
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+DY++ P +HY CM+D+LG G +EAEE++ +P P + SLL AC+ HGN+E+
Sbjct: 431 TQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLEL 490
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
E A L+K+EP SGSYVL+SN+YA G WE VA +R + KG++K G S +V
Sbjct: 491 AESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDS 550
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAE 629
+ +H F GD HPR EIY M E
Sbjct: 551 V--VHEFIIGDKLHPRRREIYHMLE 573
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 161/580 (27%), Positives = 269/580 (46%), Gaps = 96/580 (16%)
Query: 7 SGQFD---KALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVTY 60
S FD A+ +F + P+++ WNT+L G S D AL +RM +G + ++ ++
Sbjct: 8 SPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSF 67
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA--------- 111
L C + F G Q+H+ ++K G + YV +LI+MY+R G L +A
Sbjct: 68 PFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSH 127
Query: 112 ----------------------RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIE 149
R+VFDE+ +D VSWNA+++GY ++G Y EA+ E
Sbjct: 128 RDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYE-EALELFKE 186
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG----VSIKMGYGTHVSVGNVLMSTYS 205
MMR +R D + S SAC ++ELG+Q+H G+ + + + N L+ YS
Sbjct: 187 MMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYS 246
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIG 260
KC A +F + ++V+SW T+I + ++A+ LF+EM G CPNDVT +
Sbjct: 247 KCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLS 306
Query: 261 LIHAISIGNLVKEGRMIHGLCIK--TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSC 318
++ A + + GR IH K +E S+ LI MYA+ ++ + +VF+ +
Sbjct: 307 VLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLY 366
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAEDISLKHGQ 377
R + SWNA+I G+A +G + AA F + +P+ TF +L+A
Sbjct: 367 RSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSAC------------ 414
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES-QRVFNETQEKSEFAWTAIISALARH 436
SH S LLD+ G++ IF+S + +N T + + +I L
Sbjct: 415 ---SH-------------SGLLDL-GRQ--IFKSMTQDYNLTPKLEHYG--CMIDLLGHS 453
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP-SPD 495
G ++ M + PD + + S+L C ++G + ++K IEP +
Sbjct: 454 GLFKEAEEMIHTMP---MEPDGVIWCSLLKACKKHGNLELAESFAQKLIK---IEPENSG 507
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIPGG-----PGLSVLQ 530
Y + ++ GR E+ + G + G PG S ++
Sbjct: 508 SYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIE 547
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 182/392 (46%), Gaps = 20/392 (5%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y G F A +F+ + D+VSWN +++G+ ++ ++AL M V D T
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTL 199
Query: 61 STALSFCLDHEGFLFGLQLHSLIVK----FGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ +S C G Q+HS + G S + + NALI +YS+ G + A +F+
Sbjct: 200 VSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFE 259
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ KD VSWN ++ GYT Y EA+L EM+R G + V+ S AC H ++
Sbjct: 260 GLSCKDVVSWNTLIGGYTHTNLYK-EALLLFQEMLRSGECPNDVTLLSVLPACAHLGAID 318
Query: 177 LGKQIHGVSIK--MGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
+G+ IH K G S+ L+ Y+KC A++VF M R++ SW MI
Sbjct: 319 IGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFG 378
Query: 233 -SMN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMI-HGLCIKTNFLS 288
+M+ A LF MR + V P+D+TF+GL+ A S L+ GR I + N
Sbjct: 379 FAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTP 438
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNG---LSLAAVQAF 344
+ C+I + +++E++ + + + W +L+ ++G L+ + Q
Sbjct: 439 KLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKL 498
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHG 376
+ E+ + ++ G ED++ G
Sbjct: 499 IKIEPENSGSYVLLSNIYATAGRWEDVARVRG 530
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PN 354
L + F+ + + VF+ + ++ WN ++ G+A + ++A++ + ++ PN
Sbjct: 4 LCVVSPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPN 63
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK---------- 404
+Y+F +L + A+ + + G++ H+ ++K+G D V ++L+ MY +
Sbjct: 64 SYSFPFLLKS--CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKV 121
Query: 405 ---------------------RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
RG +++VF+E E+ +W A+I+ +G YE +
Sbjct: 122 FDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEAL 181
Query: 444 NQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
FKEM VRPD T +SV++ C ++G I GR +
Sbjct: 182 ELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQV 218
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++Y K G + A +F L+ D+VSWNT++ G+ ++ +AL M G +
Sbjct: 242 IDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPND 301
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVK--FGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT + L C G +H I K G+ +E + +LI MY++ G + A +VF
Sbjct: 302 VTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVF 361
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKN 174
+ M + SWNA++ G+ G A L MR + D ++F SAC H
Sbjct: 362 NSMLYRSLSSWNAMIFGFAMHGR--ANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGL 419
Query: 175 LELGKQI 181
L+LG+QI
Sbjct: 420 LDLGRQI 426
>gi|296085749|emb|CBI29560.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 193/614 (31%), Positives = 311/614 (50%), Gaps = 76/614 (12%)
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR---------- 113
L C+ G LHSL +K + Y N I +YS+ GRL AR+
Sbjct: 15 LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74
Query: 114 ---------------------VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR 152
+FD++P D VS+N ++S Y G+ L L MR
Sbjct: 75 FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE--TAPALGLFSGMR 132
Query: 153 K-GLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG 211
+ GL +D + ++ +AC + L +G Q+H V++ G+ ++VSV N L++ Y K
Sbjct: 133 EMGLDMDGFTLSAVITACCDDVGL-IG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 212 DANKVFRRMHD-RNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI 265
DA +VF M R+ +SW +MI A+ LF+EM G+ + T ++ A
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 266 SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF-ESMQDSEKVFDELSCREIISW 324
+ + G HG IKT F V + LI +Y++ M D KVF+E++ +++ W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310
Query: 325 NALISGYAQNGLSLAAVQAFFGVIK--ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
N ++SGY+QN L F ++ +PN +F V++A S G++ HS
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPS--QGKQIHSL 368
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
+K R+F+ E + + ++I+ A+HG
Sbjct: 369 ALK---------------------------RLFDRMAEHNTVSLNSMIAGYAQHGIEMES 401
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVD 502
++ F+ M + + P SITF+SVL+ C G + +G + F+ M + ++IEP +HYSCM+D
Sbjct: 402 LHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMID 461
Query: 503 MLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGS 562
+LGR G+L EAE L+ ++P PG SLLGACR HGN+E+ + A+ ++++EP+ +
Sbjct: 462 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 521
Query: 563 YVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSE 622
YV++SN+YA G WE VA +RK M+ +GV+K+ G SW +V +H F + D++HP +
Sbjct: 522 YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVK--KRIHVFVAEDSSHPMIK 579
Query: 623 EIYRMAECLGSEMK 636
EIY E + +MK
Sbjct: 580 EIYEFLEEMSGKMK 593
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 236/471 (50%), Gaps = 51/471 (10%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDAVTY 60
Y K + A +F+ + PD+VS+NT++S + ++ AL M +G+ D T
Sbjct: 84 YAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTL 143
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
S ++ C D G L G QLHS+ V G DS V V NAL+T Y + G L +A+RVF M
Sbjct: 144 SAVITACCDDVG-LIG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGG 201
Query: 121 -KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D VSWN+++ Y Q + G +A+ EM+R+GL +D + S +A ++L G
Sbjct: 202 IRDEVSWNSMIVAYGQHQE-GSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGL 260
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKC-EVTGDANKVFRRMHDRNVISWTTMI---SMN 235
Q HG IK G+ + VG+ L+ YSKC D KVF + + +++ W TM+ S N
Sbjct: 261 QFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQN 320
Query: 236 R---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
EDA+ F++M+ G PND +F+ +I A S + +G+ IH L +K
Sbjct: 321 EEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALK--------- 371
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KES 351
++FD ++ +S N++I+GYAQ+G+ + ++ F ++ ++
Sbjct: 372 ------------------RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQI 413
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIF 409
P + TF SVL+A A ++ G + +++K + +P S ++D+ G+ G +
Sbjct: 414 APTSITFISVLSA--CAHTGRVEEGWN-YFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLS 470
Query: 410 ESQRVFNETQ-EKSEFAWTAIISALARHGDYE---SVMNQFKEMENKGVRP 456
E++ + W +++ A HG+ E NQ ++E P
Sbjct: 471 EAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 521
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 173/381 (45%), Gaps = 41/381 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNN-PDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFD 56
+ Y K+G D A +F + D VSWN+++ + ++ AL M G+ D
Sbjct: 180 LTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVD 239
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR-LVEARRVF 115
T ++ L+ E GLQ H ++K G +VG+ LI +YS+ G + + R+VF
Sbjct: 240 MFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVF 299
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+E+ D V WN ++SGY+Q+ ++ +A+ +M G R + SF SAC + +
Sbjct: 300 EEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSP 359
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
GKQIH +++K ++F RM + N +S +MI+
Sbjct: 360 SQGKQIHSLALK---------------------------RLFDRMAEHNTVSLNSMIAGY 392
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ +++ LF+ M + P +TFI ++ A + V+EG + +K F EP
Sbjct: 393 AQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNM-MKEKFNIEP 451
Query: 291 SV--CNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISGYAQNGLSLAAVQAFFGV 347
+C+I + R + ++E + + I W +L+ +G AV+A V
Sbjct: 452 EAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQV 511
Query: 348 IKESKPNAYTFGSVLNAVGAA 368
++ NA + + N +A
Sbjct: 512 LQLEPSNAAPYVVLSNMYASA 532
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,133,180,841
Number of Sequences: 23463169
Number of extensions: 422485300
Number of successful extensions: 1147906
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7511
Number of HSP's successfully gapped in prelim test: 3704
Number of HSP's that attempted gapping in prelim test: 938008
Number of HSP's gapped (non-prelim): 66593
length of query: 648
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 499
effective length of database: 8,863,183,186
effective search space: 4422728409814
effective search space used: 4422728409814
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)