BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006364
(648 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/638 (59%), Positives = 495/638 (77%), Gaps = 3/638 (0%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
M MY K+G+FD ALCIF NL +PD+VSWNT+LSGF+ + AL+F +RM GVVFDA TY
Sbjct: 118 MGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTY 177
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
STALSFC+ EGFL GLQL S +VK GL+S++ VGN+ ITMYSR G ARRVFDEM
Sbjct: 178 STALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSF 237
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
KD +SWN++LSG +Q+G +G EA++ +MMR+G+ LDHVSFTS + C HE +L+L +Q
Sbjct: 238 KDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQ 297
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAV 240
IHG+ IK GY + + VGN+LMS YSKC V VF +M +RNV+SWTTMIS N++DAV
Sbjct: 298 IHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAV 357
Query: 241 SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMY 300
S+F MR DGV PN+VTF+GLI+A+ +KEG IHGLCIKT F+SEPSV N IT+Y
Sbjct: 358 SIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLY 417
Query: 301 ARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGS 360
A+FE+++D++K F++++ REIISWNA+ISG+AQNG S A++ F E+ PN YTFGS
Sbjct: 418 AKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGS 477
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
VLNA+ AEDIS+K GQRCH+H++K+GL+S P+V SALLDMY KRG+I ES++VFNE +
Sbjct: 478 VLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ 537
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
K++F WT+IISA + HGD+E+VMN F +M + V PD +TFLSVLT C R GM+ KG +
Sbjct: 538 KNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEI 597
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
F+ M++ Y++EPS +HYSCMVDMLGR GRL+EAEEL+ ++PGGPG S+LQS+LG+CR+HG
Sbjct: 598 FNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHG 657
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
NV+MG ++A+ M+M+P SGSYV M N+YAEK +W+ A +RK M+ K V KE GFSW
Sbjct: 658 NVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWI 717
Query: 601 DVGDIDG---LHGFSSGDNTHPRSEEIYRMAECLGSEM 635
DVGD +G + GFSSGD +HP+S+EIYRM E +G EM
Sbjct: 718 DVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEM 755
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 156/553 (28%), Positives = 265/553 (47%), Gaps = 33/553 (5%)
Query: 46 LRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW 105
L++ G D VT AL C G Q+H G S V V NA++ MY +
Sbjct: 67 LQLGYFGRHMDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKA 124
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
GR A +F+ + + D VSWN ILSG+ D A+ ++ M G+ D ++++A
Sbjct: 125 GRFDNALCIFENLVDPDVVSWNTILSGF----DDNQIALNFVVRMKSAGVVFDAFTYSTA 180
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
S C + LG Q+ +K G + + VGN ++ YS+ A +VF M +++
Sbjct: 181 LSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDM 240
Query: 226 ISWTTMIS-MNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHG 279
ISW +++S +++E +AV +F++M +GV + V+F +I +K R IHG
Sbjct: 241 ISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHG 300
Query: 280 LCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLA 339
LCIK + S V N L++ Y++ ++ + VF ++S R ++SW +IS + +S+
Sbjct: 301 LCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIF 360
Query: 340 AVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F GV PN TF ++NAV E I K G + H IK G S+P VG++ +
Sbjct: 361 LNMRFDGVY----PNEVTFVGLINAVKCNEQI--KEGLKIHGLCIKTGFVSEPSVGNSFI 414
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
+Y K ++ ++++ F + + +W A+IS A++G + F + + P+
Sbjct: 415 TLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEY 473
Query: 460 TFLSVLTVC--GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
TF SVL + + +G+ +LK + P S ++DM + G ++E+E++
Sbjct: 474 TFGSVLNAIAFAEDISVKQGQRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIDESEKVF 532
Query: 518 GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
++ V S++ A HG+ E + ++K E +S L
Sbjct: 533 NEMSQKNQF-VWTSIISAYSSHGDFETVMNLFHKMIK-ENVAPDLVTFLSVL-------- 582
Query: 578 MVAILRKGMKSKG 590
A RKGM KG
Sbjct: 583 -TACNRKGMVDKG 594
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/648 (34%), Positives = 376/648 (58%), Gaps = 18/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y K F +F+ + ++V+W T++SG+ ++ D+ L+ +RM G ++
Sbjct: 135 VDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNS 194
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ AL + GLQ+H+++VK GLD + V N+LI +Y + G + +AR +FD+
Sbjct: 195 FTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK 254
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
K V+WN+++SGY +G +EA+ M +RL SF S C + K L
Sbjct: 255 TEVKSVVTWNSMISGYAANG-LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRF 313
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMISM-- 234
+Q+H +K G+ ++ LM YSKC DA ++F+ + NV+SWT MIS
Sbjct: 314 TEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFL 373
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+E+AV LF EM+ GV PN+ T+ ++ A+ + + + +H +KTN+ +
Sbjct: 374 QNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSST 429
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V L+ Y + ++++ KVF + ++I++W+A+++GYAQ G + AA++ F + K
Sbjct: 430 VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
KPN +TF S+LN V AA + S+ G++ H IK LDS V SALL MY K+G+I
Sbjct: 490 IKPNEFTFSSILN-VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
++ VF +EK +W ++IS A+HG ++ FKEM+ + V+ D +TF+ V C
Sbjct: 549 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTH 608
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ +G FD M++D I P+ +H SCMVD+ R G+LE+A +++ +P G ++ +
Sbjct: 609 AGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWR 668
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
++L ACR+H E+G A+ ++ M+P S +YVL+SN+YAE GDW+ A +RK M +
Sbjct: 669 TILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERN 728
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
V+KE G+SW +V + + F +GD +HP ++IY E L + +K L
Sbjct: 729 VKKEPGYSWIEVK--NKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDL 774
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 265/531 (49%), Gaps = 23/531 (4%)
Query: 1 MNMYC----KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGV 53
+ +YC S + A +F+ D S+ ++L GF + + +A L ++ +G+
Sbjct: 30 VRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM 89
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
D +S+ L LFG QLH +KFG +V VG +L+ Y + + R+
Sbjct: 90 EMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRK 149
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VFDEM ++ V+W ++SGY ++ E + + M +G + + +F +A E
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNS-MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG 208
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
G Q+H V +K G + V N L++ Y KC A +F + ++V++W +MIS
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268
Query: 234 ---MNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
N D A+ +F MRL+ V ++ +F +I + ++ +H +K FL
Sbjct: 269 GYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCR-EIISWNALISGYAQNGLSLAAVQAFFGV 347
+ ++ L+ Y++ +M D+ ++F E+ C ++SW A+ISG+ QN AV F +
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
++ +PN +T+ +L A + + H+ ++K + VG+ALLD Y K G
Sbjct: 389 KRKGVRPNEFTYSVILTA------LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLG 442
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ E+ +VF+ +K AW+A+++ A+ G+ E+ + F E+ G++P+ TF S+L
Sbjct: 443 KVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Query: 467 VC-GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
VC N + +G+ +K ++ S S ++ M + G +E AEE+
Sbjct: 503 VCAATNASMGQGKQFHGFAIKS-RLDSSLCVSSALLTMYAKKGNIESAEEV 552
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/645 (33%), Positives = 364/645 (56%), Gaps = 14/645 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++++C+ G D+A +F +++ V ++T+L GF K D AL F +RM V
Sbjct: 76 VSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVV 135
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++ L C D G ++H L+VK G +++ L MY++ ++ EAR+VFD
Sbjct: 136 YNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR 195
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP +D VSWN I++GY+Q+G A+ + M + L+ ++ S A + + +
Sbjct: 196 MPERDLVSWNTIVAGYSQNG-MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
GK+IHG +++ G+ + V++ L+ Y+KC A ++F M +RNV+SW +MI
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ++A+ +F++M +GV P DV+ +G +HA + ++ GR IH L ++ SV
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N LI+MY + + + + +F +L R ++SWNA+I G+AQNG + A+ F + +
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
KP+ +T+ SV+ A+ AE H + H +++ LD + V +AL+DMY K G+I +
Sbjct: 435 KPDTFTYVSVITAI--AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ +F+ E+ W A+I HG ++ + F+EM+ ++P+ +TFLSV++ C +
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G++ G F M ++Y IE S DHY MVD+LGR GRL EA + + Q+P P ++V +
Sbjct: 553 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
+LGAC+IH NV E+ A+ L ++ P G +VL++N+Y WE V +R M +G+
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
RK G S ++ + +H F SG HP S++IY E L +K
Sbjct: 673 RKTPGCSMVEIK--NEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 238/440 (54%), Gaps = 12/440 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+ L+ K GL E + L++++ R+G + EA RVF+ + +K +V ++ +L G+ +
Sbjct: 55 QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVS 114
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
D +A+ + M + +FT CG E L +GK+IHG+ +K G+ +
Sbjct: 115 DLD-KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 198 NVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVC 252
L + Y+KC +A KVF RM +R+++SW T+++ ++ A+ + K M + +
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 253 PNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
P+ +T + ++ A+S L+ G+ IHG +++ F S ++ L+ MYA+ S++ + ++
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
FD + R ++SWN++I Y QN A+ F ++ E KP T SV+ A+ A D+
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP---TDVSVMGALHACADL 350
Query: 372 -SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
L+ G+ H +++GLD + V ++L+ MY K + + +F + Q ++ +W A+I
Sbjct: 351 GDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMI 410
Query: 431 SALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHI 490
A++G +N F +M ++ V+PD+ T++SV+T + H + + +++ +
Sbjct: 411 LGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC-L 469
Query: 491 EPSPDHYSCMVDMLGRVGRL 510
+ + + +VDM + G +
Sbjct: 470 DKNVFVTTALVDMYAKCGAI 489
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 120/255 (47%), Gaps = 20/255 (7%)
Query: 271 VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISG 330
+KE R I L K E L++++ R+ S+ ++ +VF+ + + + ++ ++ G
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG 109
Query: 331 YAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLD 389
+A+ A+Q F + + +P Y F +L G ++ L+ G+ H ++K G
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCG--DEAELRVGKEIHGLLVKSGFS 167
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
D + L +MY K + E+++VF+ E+ +W I++ +++G + K M
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHL--------FDSMLKDYHIEPSPDHYSCMV 501
+ ++P IT +SVL +I G+ + FDS++ + + +V
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV---------NISTALV 278
Query: 502 DMLGRVGRLEEAEEL 516
DM + G LE A +L
Sbjct: 279 DMYAKCGSLETARQL 293
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 5/152 (3%)
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
SLK ++ + K GL + + L+ ++ + GS+ E+ RVF K + ++
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIE 491
A+ D + + F M V P F +L VCG + G+ + ++K
Sbjct: 109 GFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF-- 166
Query: 492 PSPDHYSC--MVDMLGRVGRLEEAEELVGQIP 521
S D ++ + +M + ++ EA ++ ++P
Sbjct: 167 -SLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/652 (35%), Positives = 370/652 (56%), Gaps = 28/652 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA----LSFALRMNLIGVVFD 56
+N+YC G A F+++ N D+ +WN ++SG+ ++ ++ F+L M G+ D
Sbjct: 93 VNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPD 152
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ + L C + G ++H L +KFG +VYV +LI +YSR+ + AR +FD
Sbjct: 153 YRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFD 209
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR-LDHVSFTSAASACGHEKNL 175
EMP +D SWNA++SGY Q G+ EA+ + GLR +D V+ S SAC +
Sbjct: 210 EMPVRDMGSWNAMISGYCQSGN-AKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDF 263
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
G IH SIK G + + V N L+ Y++ D KVF RM+ R++ISW ++I
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 234 -MNRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN-FLSE 289
+N + A+SLF+EMRL + P+ +T I L +S ++ R + G ++ FL +
Sbjct: 324 ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
++ N ++ MYA+ + + VF+ L ++ISWN +ISGYAQNG + A++ + +++
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE-MYNIME 442
Query: 350 ES---KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
E N T+ SVL A A +L+ G + H ++K GL D V ++L DMYGK G
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAG--ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ ++ +F + + W +I+ HG E + FKEM ++GV+PD ITF+++L+
Sbjct: 501 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C +G++ +G+ F+ M DY I PS HY CMVDM GR G+LE A + + + P
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
S+ +LL ACR+HGNV++G+ ++ L ++EP G +VL+SN+YA G WE V +R
Sbjct: 621 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIA 680
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYL 638
KG+RK G+S +V + + F +G+ THP EE+YR L +++K +
Sbjct: 681 HGKGLRKTPGWSSMEVD--NKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 157/553 (28%), Positives = 254/553 (45%), Gaps = 47/553 (8%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTAL 64
CK G+F + L S +V+ F S +AL + D V T
Sbjct: 15 CKGGRFTRVL-----------QSIGSVIREFSASANALQDCWKNGNESKEIDDV--HTLF 61
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV 124
+C + + LH+ +V V + L+ +Y G + AR FD + N+D
Sbjct: 62 RYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
+WN ++SGY + G+ + M+ GL D+ +F S AC + + G +IH +
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCL 175
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDA 239
++K G+ V V L+ YS+ + G+A +F M R++ SW MI S N ++A
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
++L +R + VT + L+ A + G IH IK SE V N LI +
Sbjct: 236 LTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTF 358
YA F ++D +KVFD + R++ISWN++I Y N L A+ F + + +P+ T
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
S+ + + DI + + ++ G D +G+A++ MY K G + ++ VFN
Sbjct: 352 ISLASILSQLGDI--RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLSVLTVCGRNGMIHK 476
+W IIS A++G + + ME +G + + T++SVL C + G + +
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 477 GRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G L +LK D + S + DM G+ GRLE+A L QIP SV +
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTS------LADMYGKCGRLEDALSLFYQIPRVN--SVPWN 521
Query: 532 LLGACR-IHGNVE 543
L AC HG+ E
Sbjct: 522 TLIACHGFHGHGE 534
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 132/338 (39%), Gaps = 56/338 (16%)
Query: 2 NMYCKSGQFDKALCIFNNLNNPDIVSWNTVLS--GFE-KSDDALSFALRMNLIGVVFDAV 58
+MY K G+ + AL +F + + V WNT+++ GF + A+ M GV D +
Sbjct: 494 DMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI 553
Query: 59 TYSTALSFCLDHEGFLFGLQ--LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ T LS C H G + Q + +G+ + ++ MY R G+L A +
Sbjct: 554 TFVTLLSAC-SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 117 EMP-NKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
M D+ W A+LS G D G A L E+ + + HV ++ ++ G +
Sbjct: 613 SMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY-HVLLSNMYASAGKWE 671
Query: 174 NLELGKQI-HGVSIKMGYG-THVSVGNVLMSTYSKCEVTGDANKVFRRM----------- 220
++ + I HG ++ G + + V N + Y+ + +++R +
Sbjct: 672 GVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIG 731
Query: 221 -----------------------HDRNVISWTTMISMNREDAVSLFKEMRLDGVCPNDVT 257
H + +I+ + + +FK +R+ G C +
Sbjct: 732 YVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTK 791
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
FI I I +V++ H + VC+C
Sbjct: 792 FISKITEREI--IVRDSNRFHHF--------KNGVCSC 819
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 227/648 (35%), Positives = 345/648 (53%), Gaps = 18/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY K + + A +F L + V WN ++ G+ +S + + M G D
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+++ LS C G Q HS+I+K L ++VGNAL+ MY++ G L +AR++F+
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++D+V+WN I+ Y QD + EA M G+ D S AC H L
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENES-EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQ 547
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
GKQ+H +S+K G + G+ L+ YSKC + DA KVF + + +V+S +I+
Sbjct: 548 GKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ 607
Query: 234 MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
N E+AV LF+EM GV P+++TF ++ A + G HG K F SE
Sbjct: 608 NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYL 667
Query: 294 N-CLITMYARFESMQDSEKVFDELSC-REIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
L+ MY M ++ +F ELS + I+ W ++SG++QNG A++ F+ ++
Sbjct: 668 GISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALK-FYKEMRHD 726
Query: 352 K--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ TF +VL SL+ G+ HS I + D D + + L+DMY K G +
Sbjct: 727 GVLPDQATFVTVLRVCSVLS--SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMK 784
Query: 410 ESQRVFNETQEKSEF-AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S +VF+E + +S +W ++I+ A++G E + F M + PD ITFL VLT C
Sbjct: 785 GSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTAC 844
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G + GR +F+ M+ Y IE DH +CMVD+LGR G L+EA++ + P +
Sbjct: 845 SHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARL 904
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
SLLGACRIHG+ GE A+ L+++EP S +YVL+SN+YA +G WE LRK M+
Sbjct: 905 WSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRD 964
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+GV+K G+SW DV H F++GD +H +I E L MK
Sbjct: 965 RGVKKVPGYSWIDVE--QRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 259 bits (663), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 164/564 (29%), Positives = 288/564 (51%), Gaps = 18/564 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
+N Y + G+ A +F +++PD+V+WN ++SG K A+ + M V
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + LS GL +H+ +K GL S +YVG++L++MYS+ ++ A +VF+
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ K+ V WNA++ GY +G+ + + ++M G +D +FTS S C +LE+
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGE-SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G Q H + IK ++ VGN L+ Y+KC DA ++F RM DR+ ++W T+I
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ 506
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N +A LFK M L G+ + + A + + + +G+ +H L +K +
Sbjct: 507 DENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHT 566
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
+ LI MY++ ++D+ KVF L ++S NALI+GY+QN L A V + +
Sbjct: 567 GSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVN 626
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSD-PIVGSALLDMYGKRGSIFES 411
P+ TF +++ A E ++L G + H I K G S+ +G +LL MY + E+
Sbjct: 627 PSEITFATIVEACHKPESLTL--GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEA 684
Query: 412 QRVFNE-TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+F+E + KS WT ++S +++G YE + +KEM + GV PD TF++VL VC
Sbjct: 685 CALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSV 744
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYS--CMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+ +GR + + +H+ D + ++DM + G ++ + ++ ++ +
Sbjct: 745 LSSLREGRAIHSLI---FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVS 801
Query: 529 LQSLLGACRIHGNVEMGERIADAL 552
SL+ +G E +I D++
Sbjct: 802 WNSLINGYAKNGYAEDALKIFDSM 825
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 234/469 (49%), Gaps = 53/469 (11%)
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
VFD + AL+ + G +HS + G+DSE +GNA++ +Y++ ++ A +
Sbjct: 64 VFDEMPQRLALALRI-------GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEK 116
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
FD + KD +WN++LS Y+ G G + + + + + + + +F+ S C E
Sbjct: 117 QFDFL-EKDVTAWNSMLSMYSSIGKPG-KVLRSFVSLFENQIFPNKFTFSIVLSTCARET 174
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
N+E G+QIH IKMG + G L+ Y+KC+ DA +VF + D N + WT + S
Sbjct: 175 NVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFS 234
Query: 234 MN-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
E+AV +F+ MR +G P+ + F+ +I+
Sbjct: 235 GYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT------------------------ 270
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
Y R ++D+ +F E+S ++++WN +ISG+ + G A++ FF +
Sbjct: 271 -----------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMR 319
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
K S K T GSVL+A+G ++ L G H+ IK+GL S+ VGS+L+ MY K
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDL--GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ + +VF +EK++ W A+I A +G+ VM F +M++ G D TF S+L+
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
C + + G F S++ + + + +VDM + G LE+A ++
Sbjct: 438 CAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 138/278 (49%), Gaps = 16/278 (5%)
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
G+ +H + SE + N ++ +YA+ + +EK FD L +++ +WN+++S Y+
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSS 137
Query: 334 NGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
G +++F + + PN +TF VL+ A + +++ G++ H +IK+GL+ +
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLST--CARETNVEFGRQIHCSMIKMGLERNS 195
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK 452
G AL+DMY K I +++RVF + + WT + S + G E + F+ M ++
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD--HYSCMVDMLGRVGRL 510
G RPD + F++V+ R G + R LF M SPD ++ M+ G+ G
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEM-------SSPDVVAWNVMISGHGKRGCE 308
Query: 511 EEAEELVGQIPGG---PGLSVLQSLLGACRIHGNVEMG 545
A E + S L S+L A I N+++G
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/656 (32%), Positives = 351/656 (53%), Gaps = 79/656 (12%)
Query: 56 DAVTYSTALSFCLDHE-GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D+ ++ L C+ + ++ +H+ ++K G +E+++ N LI YS+ G L + R+V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 115 FDEMPNKDSVSWNAILSGYTQDG------------------------------DYGVEAI 144
FD+MP ++ +WN++++G T+ G D EA+
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 145 LALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTY 204
M ++G L+ SF S SAC ++ G Q+H + K + + V +G+ L+ Y
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 205 SKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFI 259
SKC DA +VF M DRNV+SW ++I+ + +A+ +F+ M V P++VT
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFL-SEPSVCNCLITMYARFESMQDSEKVFDELSC 318
+I A + + +K G+ +HG +K + L ++ + N + MYA+ ++++ +FD +
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 319 REII-------------------------------SWNALISGYAQNGLSLAAVQAFFGV 347
R +I SWNALI+GY QNG + A+ F +
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 348 IKESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL------DSDPIVGSALLD 400
+ES P Y+F ++L A ++ L G + H H++K G + D VG++L+D
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHL--GMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K G + E VF + E+ +W A+I A++G + F+EM G +PD IT
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ VL+ CG G + +GRH F SM +D+ + P DHY+CMVD+LGR G LEEA+ ++ ++
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 521 PGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVA 580
P P + SLL AC++H N+ +G+ +A+ L+++EP+ SG YVL+SN+YAE G WE V
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615
Query: 581 ILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+RK M+ +GV K+ G SW + D H F D +HPR ++I+ + + L +EM+
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHD--HVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/555 (26%), Positives = 262/555 (47%), Gaps = 87/555 (15%)
Query: 6 KSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYST 62
K G D+A +F ++ D +WN+++SGF + D +AL + M+ G V + ++++
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
LS C G+Q+HSLI K S+VY+G+AL+ MYS+ G + +A+RVFDEM +++
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSWN++++ + Q+G VEA+ M+ + D V+ S SAC +++G+++H
Sbjct: 218 VVSWNSLITCFEQNGP-AVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 183 GVSIKMG-YGTHVSVGNVLMSTYSKCE-------------------------------VT 210
G +K + + N + Y+KC T
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336
Query: 211 GDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHA- 264
A +F +M +RNV+SW +I+ E+A+SLF ++ + VCP +F ++ A
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 265 -----ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
+ +G + HG ++ + V N LI MY + +++ VF ++ R
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQR 378
+ +SWNA+I G+AQNG A++ F +++ KP+ T VL+A G
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG------------ 504
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H+ ++ G R R F + + T ++ L R G
Sbjct: 505 -HAGFVEEG-----------------RHYFSSMTRDFGVAPLRDHY--TCMVDLLGRAGF 544
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD-HY 497
E + +EM ++PDS+ + S+L C + I G+++ + +L+ +EPS Y
Sbjct: 545 LEEAKSMIEEMP---MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE---VEPSNSGPY 598
Query: 498 SCMVDMLGRVGRLEE 512
+ +M +G+ E+
Sbjct: 599 VLLSNMYAELGKWED 613
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 181/379 (47%), Gaps = 51/379 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
++MY K G + A +F+ + + ++VSWN++++ FE++ +AL M V D
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDE 253
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT ++ +S C G ++H +VK L +++ + NA + MY++ R+ EAR +FD
Sbjct: 254 VTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD 313
Query: 117 EMP-------------------------------NKDSVSWNAILSGYTQDGDYGVEAIL 145
MP ++ VSWNA+++GYTQ+G+ EA+
Sbjct: 314 SMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE-NEEALS 372
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI------HGVSIKMGYGTHVSVGNV 199
+ R+ + H SF + AC L LG Q HG + G + VGN
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMRLDGVCPN 254
L+ Y KC + VFR+M +R+ +SW MI + N +A+ LF+EM G P+
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD 492
Query: 255 DVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP--SVCNCLITMYARFESMQDSEKV 312
+T IG++ A V+EGR + +F P C++ + R +++++ +
Sbjct: 493 HITMIGVLSACGHAGFVEEGRHYFS-SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSM 551
Query: 313 FDELSCR-EIISWNALISG 330
+E+ + + + W +L++
Sbjct: 552 IEEMPMQPDSVIWGSLLAA 570
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/644 (33%), Positives = 351/644 (54%), Gaps = 19/644 (2%)
Query: 16 IFNNLNNPDIVSWNTVLSGF---EKSDDALS-FALRMNLIGVVFDAVTYSTALSFCLDHE 71
IF ++ PD+ +N ++ GF E +LS FA + ++ TY+ A+S
Sbjct: 74 IFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFR 133
Query: 72 GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
G +H V G DSE+ +G+ ++ MY ++ R+ +AR+VFD MP KD++ WN ++S
Sbjct: 134 DDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMIS 193
Query: 132 GYTQDGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGY 190
GY ++ Y VE+I +++ + RLD + A + L LG QIH ++ K G
Sbjct: 194 GYRKNEMY-VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 191 GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKE 245
+H V +S YSKC + +FR +++++ MI + E ++SLFKE
Sbjct: 253 YSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKE 312
Query: 246 MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
+ L G T + L+ L+ IHG C+K+NFLS SV L T+Y++
Sbjct: 313 LMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNE 369
Query: 306 MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESKPNAYTFGSVLNA 364
++ + K+FDE + + SWNA+ISGY QNGL+ A+ F + K E PN T +L+A
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 365 VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEF 424
+SL G+ H + +S V +AL+ MY K GSI E++R+F+ +K+E
Sbjct: 430 CAQLGALSL--GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV 487
Query: 425 AWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSM 484
W +IS HG + +N F EM N G+ P +TFL VL C G++ +G +F+SM
Sbjct: 488 TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Query: 485 LKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEM 544
+ Y EPS HY+CMVD+LGR G L+ A + + + PG SV ++LLGACRIH + +
Sbjct: 548 IHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNL 607
Query: 545 GERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGD 604
+++ L +++P G +VL+SN+++ ++ A +R+ K + + K G++ ++G+
Sbjct: 608 ARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGE 667
Query: 605 IDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
H F+SGD +HP+ +EIY E L +M+ + E +AL
Sbjct: 668 TP--HVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELAL 709
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 218/451 (48%), Gaps = 20/451 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLIG---VVFD 56
+ MY K + + A +F+ + D + WNT++SG+ K++ + S + +LI D
Sbjct: 161 VKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLD 220
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T L + + G+Q+HSL K G S YV I++YS+ G++ +F
Sbjct: 221 TTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFR 280
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNL 175
E D V++NA++ GYT +G+ E L+L E+M G RL + S GH L
Sbjct: 281 EFRKPDIVAYNAMIHGYTSNGE--TELSLSLFKELMLSGARLRSSTLVSLVPVSGH---L 335
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
L IHG +K + +H SV L + YSK A K+F ++++ SW MIS
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 234 -MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
N EDA+SLF+EM+ PN VT ++ A + + G+ +H L T+F S
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
V LI MYA+ S+ ++ ++FD ++ + ++WN +ISGY +G A+ F+ ++
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS 515
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHII-KVGLDSDPIVGSALLDMYGKRGSI 408
P TF VL A A + K G + +I + G + + ++D+ G+ G +
Sbjct: 516 GITPTPVTFLCVLYACSHAGLV--KEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHL 573
Query: 409 FES-QRVFNETQEKSEFAWTAIISALARHGD 438
+ Q + + E W ++ A H D
Sbjct: 574 QRALQFIEAMSIEPGSSVWETLLGACRIHKD 604
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/648 (32%), Positives = 353/648 (54%), Gaps = 18/648 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDA-LSFALRMNLI--GVVFDA 57
++ Y K G D A +F+ L V+W T++SG K + +S L L+ VV D
Sbjct: 190 IDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDG 249
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
ST LS C G Q+H+ I+++GL+ + + N LI Y + GR++ A ++F+
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG 309
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MPNK+ +SW +LSGY Q+ + EA+ M + GL+ D + +S ++C L
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHK-EAMELFTSMSKFGLKPDMYACSSILTSCASLHALGF 368
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G Q+H +IK G V N L+ Y+KC+ DA KVF +V+ + MI
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR 428
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+A+++F++MR + P+ +TF+ L+ A + + + IHGL K +
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLD 488
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-I 348
+ LI +Y+ ++DS VFDE+ ++++ WN++ +GY Q + A+ F + +
Sbjct: 489 IFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQL 548
Query: 349 KESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+P+ +TF +++ A G + L GQ H ++K GL+ +P + +ALLDMY K GS
Sbjct: 549 SRERPDEFTFANMVTAAGNLASVQL--GQEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ + F+ + W ++IS+ A HG+ + + ++M ++G+ P+ ITF+ VL+ C
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G++ G F+ ML+ + IEP +HY CMV +LGR GRL +A EL+ ++P P V
Sbjct: 667 SHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV 725
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+SLL C GNVE+ E A+ + +P SGS+ ++SN+YA KG W +R+ MK
Sbjct: 726 WRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKV 785
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+GV KE G SW +G +H F S D +H ++ +IY + + L +++
Sbjct: 786 EGVVKEPGRSW--IGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 157/538 (29%), Positives = 266/538 (49%), Gaps = 35/538 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG------FEKSDDALSFALRMNLIGVV 54
+N+Y ++G A +F + ++VSW+T++S +E+S + +
Sbjct: 86 INLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEES-----LVVFLEFWRTR 140
Query: 55 FDAVTYSTALSFC-----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLV 109
D+ SF LD G QL S +VK G D +VYVG LI Y + G +
Sbjct: 141 KDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNID 200
Query: 110 EARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC 169
AR VFD +P K +V+W ++SG + G V L ++M + D ++ SAC
Sbjct: 201 YARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQL-FYQLMEDNVVPDGYILSTVLSAC 259
Query: 170 GHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT 229
LE GKQIH ++ G S+ NVL+ +Y KC A+K+F M ++N+ISWT
Sbjct: 260 SILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWT 319
Query: 230 TMISMNREDAV-----SLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKT 284
T++S +++A+ LF M G+ P+ ++ + + + + G +H IK
Sbjct: 320 TLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKA 379
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
N ++ V N LI MYA+ + + D+ KVFD + +++ +NA+I GY++ G +A
Sbjct: 380 NLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEAL 439
Query: 345 -------FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
F +I +P+ TF S+L A +A SL ++ H + K GL+ D GSA
Sbjct: 440 NIFRDMRFRLI---RPSLLTFVSLLRA--SASLTSLGLSKQIHGLMFKYGLNLDIFAGSA 494
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L+D+Y + +S+ VF+E + K W ++ + + + E +N F E++ RPD
Sbjct: 495 LIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPD 554
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
TF +++T G + G+ +LK +E +P + ++DM + G E+A +
Sbjct: 555 EFTFANMVTAAGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHK 611
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 208/401 (51%), Gaps = 19/401 (4%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H I+ +GL+ + Y+ N LI +YSR G +V AR+VF++MP ++ VSW+ ++S G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 139 YGVEAILALIEMMRKGLRLDHVS---FTSAASACG--HEKNLELGKQIHGVSIKMGYGTH 193
Y E+++ +E R R D + +S AC + + Q+ +K G+
Sbjct: 126 YE-ESLVVFLEFWRT--RKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRD 182
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS----MNRED-AVSLFKEMRL 248
V VG +L+ Y K A VF + +++ ++WTTMIS M R ++ LF ++
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
D V P+ ++ A SI ++ G+ IH ++ + S+ N LI Y + +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGA 367
+ K+F+ + + IISW L+SGY QN L A++ F + K KP+ Y S+L + +
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
+L G + H++ IK L +D V ++L+DMY K + ++++VF+ +
Sbjct: 363 LH--ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFN 420
Query: 428 AIISALARHG---DYESVMNQFKEMENKGVRPDSITFLSVL 465
A+I +R G + +N F++M + +RP +TF+S+L
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 3/266 (1%)
Query: 258 FIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELS 317
F L+ + +L+ ++HG I + + N LI +Y+R M + KVF+++
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 318 CREIISWNALISGYAQNGLSLAAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKH 375
R ++SW+ ++S +G+ ++ F F ++ PN Y S + A +
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
+ S ++K G D D VG+ L+D Y K G+I ++ VF+ EKS WT +IS +
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 436 HGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD 495
G + F ++ V PD +VL+ C + G+ + +L+ Y +E
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDAS 285
Query: 496 HYSCMVDMLGRVGRLEEAEELVGQIP 521
+ ++D + GR+ A +L +P
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMP 311
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
A D L + H II GL+ D + + L+++Y + G + +++VF + E++ +W+
Sbjct: 55 ASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWS 114
Query: 428 AIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVC------------------ 468
++SA HG YE + F E + P+ S + C
Sbjct: 115 TMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFL 174
Query: 469 ---GRNGMIHKGRHLFDSMLKDYHI-----------EPSPDHYSCMVDMLGRVGRLEEAE 514
G + ++ G L D LKD +I E S ++ M+ ++GR +
Sbjct: 175 VKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSL 234
Query: 515 ELVGQIPGG---PGLSVLQSLLGACRIHGNVEMGERIADALMK 554
+L Q+ P +L ++L AC I +E G++I +++
Sbjct: 235 QLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR 277
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/645 (34%), Positives = 348/645 (53%), Gaps = 19/645 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTY 60
Y + G+ D +F+ + D V WN +L+G+ K D + M + + +AVT+
Sbjct: 183 YLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTF 242
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
LS C G+QLH L+V G+D E + N+L++MYS+ GR +A ++F M
Sbjct: 243 DCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
D+V+WN ++SGY Q G E++ EM+ G+ D ++F+S + +NLE KQ
Sbjct: 303 ADTVTWNCMISGYVQSG-LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQ 361
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE--- 237
IH ++ + + + L+ Y KC A +F + + +V+ +T MIS
Sbjct: 362 IHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGL 421
Query: 238 --DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNC 295
D++ +F+ + + PN++T + ++ I I +K GR +HG IK F + ++
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVIKESKP 353
+I MYA+ M + ++F+ LS R+I+SWN++I+ AQ+ AA+ F GV
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV----SG 537
Query: 354 NAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
Y S+ A+ A ++ S G+ H +IK L SD S L+DMY K G++ +
Sbjct: 538 ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAM 597
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRN 471
VF +EK+ +W +II+A HG + + F EM E G+RPD ITFL +++ C
Sbjct: 598 NVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHV 657
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + +G F SM +DY I+P +HY+C+VD+ GR GRL EA E V +P P V +
Sbjct: 658 GDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGT 717
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
LLGACR+H NVE+ E + LM ++P+ SG YVL+SN +A +WE V +R MK + V
Sbjct: 718 LLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREV 777
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+K G+SW ++ H F SGD HP S IY + L E++
Sbjct: 778 QKIPGYSWIEIN--KRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/555 (25%), Positives = 278/555 (50%), Gaps = 18/555 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLN--NPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVF 55
+ MY G F +F L+ I WN+++S F ++ + AL+F +M GV
Sbjct: 77 LGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSP 136
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T+ + C+ + F L + G+D +V ++LI Y +G++ ++F
Sbjct: 137 DVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLF 196
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKN 174
D + KD V WN +L+GY + G +++++ +MR + + V+F S C +
Sbjct: 197 DRVLQKDCVIWNVMLNGYAKCG--ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
++LG Q+HG+ + G S+ N L+S YSKC DA+K+FR M + ++W MIS
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISG 314
Query: 235 N-----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
E++++ F EM GV P+ +TF L+ ++S ++ + IH ++ + +
Sbjct: 315 YVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLD 374
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ + LI Y + + ++ +F + + +++ + A+ISGY NGL + +++ F ++K
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Query: 350 -ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ PN T S+L +G ++LK G+ H IIK G D+ +G A++DMY K G +
Sbjct: 435 VKISPNEITLVSILPVIGIL--LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRM 492
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
+ +F ++ +W ++I+ A+ + + ++ F++M G+ D ++ + L+ C
Sbjct: 493 NLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
G+ + M+K + + S ++DM + G L+ A + + +S
Sbjct: 553 ANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS- 610
Query: 529 LQSLLGACRIHGNVE 543
S++ AC HG ++
Sbjct: 611 WNSIIAACGNHGKLK 625
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 220/453 (48%), Gaps = 12/453 (2%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSV--SWNAILSGY 133
G Q+H+ ++ + + Y ++ MY+ G + ++F + + S WN+I+S +
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSF 113
Query: 134 TQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTH 193
++G +A+ +M+ G+ D +F AC KN + + +G +
Sbjct: 114 VRNGLLN-QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCN 172
Query: 194 VSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRL 248
V + L+ Y + +K+F R+ ++ + W M++ + + F MR+
Sbjct: 173 EFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM 232
Query: 249 DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQD 308
D + PN VTF ++ + L+ G +HGL + + E S+ N L++MY++ D
Sbjct: 233 DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD 292
Query: 309 SEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-PNAYTFGSVLNAVGA 367
+ K+F +S + ++WN +ISGY Q+GL ++ F+ +I P+A TF S+L +V
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 368 AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWT 427
E+ L++ ++ H +I++ + D + SAL+D Y K + +Q +F++ +T
Sbjct: 353 FEN--LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 428 AIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD 487
A+IS +G Y + F+ + + P+ IT +S+L V G + GR L ++K
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 488 YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ + ++DM + GR+ A E+ ++
Sbjct: 471 -GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 12/288 (4%)
Query: 261 LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
L+ A S NL+++G+ +H I + + ++ MYA S D K+F L R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 321 --IISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQ 377
I WN++IS + +NGL A+ +F ++ P+ TF ++ A A ++ K
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKN--FKGID 158
Query: 378 RCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHG 437
+ +G+D + V S+L+ Y + G I ++F+ +K W +++ A+ G
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 438 DYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY 497
+SV+ F M + P+++TF VL+VC +I G L ++ ++
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL-HGLVVVSGVDFEGSIK 277
Query: 498 SCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMG 545
+ ++ M + GR ++A +L +S ++ C I G V+ G
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRM------MSRADTVTWNCMISGYVQSG 319
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 347/632 (54%), Gaps = 15/632 (2%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVT 59
MY G +A +F+ + + WN +++ KS D ++ +M GV D+ T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+S G QLH I+K G VGN+L+ Y + R+ AR+VFDEM
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGK 179
+D +SWN+I++GY +G + + ++M+ G+ +D + S + C + + LG+
Sbjct: 258 ERDVISWNSIINGYVSNG-LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 180 QIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNRE- 237
+H + +K + N L+ YSKC A VFR M DR+V+S+T+MI+ RE
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 238 ---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN 294
+AV LF+EM +G+ P+ T +++ + L+ EG+ +H + + + V N
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 295 CLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-- 352
L+ MYA+ SMQ++E VF E+ ++IISWN +I GY++N + A+ F +++E +
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
P+ T VL A + + G+ H +I++ G SD V ++L+DMY K G++ +
Sbjct: 497 PDERTVACVLPACASLS--AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F++ K +WT +I+ HG + + F +M G+ D I+F+S+L C +G
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ +G F+ M + IEP+ +HY+C+VDML R G L +A + +P P ++ +L
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L CRIH +V++ E++A+ + ++EP +G YVLM+N+YAE WE V LRK + +G+R
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 734
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
K G SW ++ ++ F +GD+++P +E I
Sbjct: 735 KNPGCSWIEIK--GRVNIFVAGDSSNPETENI 764
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 241/478 (50%), Gaps = 21/478 (4%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T + L C D + G ++ + I G + +G+ L MY+ G L EA RVF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
DE+ + ++ WN +++ + GD+ +I +MM G+ +D +F+ + + +++
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFS-GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G+Q+HG +K G+G SVGN L++ Y K + A KVF M +R+VISW ++I+
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 236 -----REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
E +S+F +M + G+ + T + + + L+ GR +H + +K F E
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
CN L+ MY++ + ++ VF E+S R ++S+ ++I+GYA+ GL+ AV+ F + +E
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
P+ YT +VLN A L G+R H I + L D V +AL+DMY K GS+
Sbjct: 392 GISPDVYTVTAVLNC--CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFK-EMENKGVRPDSITFLSVLTVC 468
E++ VF+E + K +W II +++ ++ F +E K PD T VL C
Sbjct: 450 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 509
Query: 469 GRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
KGR + +++ D H+ S +VDM + G L A L I
Sbjct: 510 ASLSAFDKGREIHGYIMRNGYFSDRHVANS------LVDMYAKCGALLLAHMLFDDIA 561
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 181/364 (49%), Gaps = 9/364 (2%)
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
+D + S C K+L+ GK++ G+ ++G+ L Y+ C +A++V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 217 FRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F + + W ++ S + ++ LFK+M GV + TF + + S V
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
G +HG +K+ F SV N L+ Y + + + + KVFDE++ R++ISWN++I+GY
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 332 AQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
NGL+ + F ++ + + T SV + ISL G+ HS +K
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISL--GRAVHSIGVKACFSR 329
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
+ + LLDMY K G + ++ VF E ++S ++T++I+ AR G + F+EME
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+G+ PD T +VL C R ++ +G+ + + +K+ + + ++DM + G +
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 511 EEAE 514
+EAE
Sbjct: 449 QEAE 452
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 217/437 (49%), Gaps = 23/437 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G D A +F +++ +VS+ ++++G+ + + +A+ M G+ D
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L+ C + G ++H I + L +++V NAL+ MY++ G + EA VF E
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 457
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL--DHVSFTSAASACGHEKNL 175
M KD +SWN I+ GY+++ Y EA L+L ++ + R D + AC
Sbjct: 458 MRVKDIISWNTIIGGYSKNC-YANEA-LSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-- 233
+ G++IHG ++ GY + V N L+ Y+KC A+ +F + ++++SWT MI+
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 575
Query: 234 -MN--REDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
M+ ++A++LF +MR G+ ++++F+ L++A S LV EG + ++ EP
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNI-MRHECKIEP 634
Query: 291 SVCN--CLITMYARFESMQDSEKVFDELSC-REIISWNALISG-YAQNGLSLAAVQAFFG 346
+V + C++ M AR + + + + + + W AL+ G + + LA A
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
Query: 347 VIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
E + Y VL A AE + +R I + GL +P G + +++ G R
Sbjct: 695 FELEPENTGYY---VLMANIYAEAEKWEQVKRLRKRIGQRGLRKNP--GCSWIEIKG-RV 748
Query: 407 SIFESQRVFNETQEKSE 423
+IF + N E E
Sbjct: 749 NIFVAGDSSNPETENIE 765
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 329 SGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
SG +N + L V + + + T SVL A+ SLK G+ + I G
Sbjct: 74 SGNLENAVKLLCVSGKWDI------DPRTLCSVLQL--CADSKSLKDGKEVDNFIRGNGF 125
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
D +GS L MY G + E+ RVF+E + + W +++ LA+ GD+ + FK+
Sbjct: 126 VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKK 185
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK 486
M + GV DS TF V +H G L +LK
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/636 (32%), Positives = 355/636 (55%), Gaps = 22/636 (3%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCLDHEG 72
+F + + WNT+L + ++ L M D T AL C +
Sbjct: 16 MFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELRE 75
Query: 73 FLFGLQLHSLIVK-FGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
+G +H + K L S++YVG++LI MY + GR++EA R+FDE+ D V+W++++S
Sbjct: 76 VNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVS 135
Query: 132 GYTQDGD--YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMG 189
G+ ++G VE ++ M + D V+ + SAC N LG+ +HG I+ G
Sbjct: 136 GFEKNGSPYQAVEFFRRMV--MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRG 193
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE-----DAVSLFK 244
+ +S+ N L++ Y+K +A +F+ + +++VISW+T+I+ + +A+ +F
Sbjct: 194 FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFN 253
Query: 245 EMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFE 304
+M DG PN T + ++ A + + +++GR H L I+ +E V L+ MY +
Sbjct: 254 DMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCF 313
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVL 362
S +++ VF + ++++SW ALISG+ NG++ +++ F ++ E ++P+A VL
Sbjct: 314 SPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVL 373
Query: 363 NAVGAAEDISLKHGQRC-HSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
G+ ++ +C HS++IK G DS+P +G++L+++Y + GS+ + +VFN K
Sbjct: 374 ---GSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK 430
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEM-ENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
WT++I+ HG + F M ++ V+P+ +TFLS+L+ C G+IH+G +
Sbjct: 431 DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHG 540
F M+ DY + P+ +HY+ +VD+LGRVG L+ A E+ ++P P +L +LLGACRIH
Sbjct: 491 FKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQ 550
Query: 541 NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWA 600
N EM E +A L ++E +G Y+LMSN+Y KG+WE V LR +K +G++K + S
Sbjct: 551 NGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLI 610
Query: 601 DVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
++ +H F + D HP E +Y + + L MK
Sbjct: 611 EIR--RKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 227/443 (51%), Gaps = 16/443 (3%)
Query: 109 VEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASA 168
V+AR++F EM + WN +L +++ + E + M R + D+ + A A
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWE-EVLYHFSHMFRDEEKPDNFTLPVALKA 69
Query: 169 CGHEKNLELGKQIHG-VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVIS 227
CG + + G+ IHG V + G+ + VG+ L+ Y KC +A ++F + ++++
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 228 WTTMISMNRED-----AVSLFKEMRL-DGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
W++M+S ++ AV F+ M + V P+ VT I L+ A + + + GR +HG
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
I+ F ++ S+ N L+ YA+ + +++ +F ++ +++ISW+ +I+ Y QNG + A+
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 342 QAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
F ++ + ++PN T VL A AA D L+ G++ H I+ GL+++ V +AL+D
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHD--LEQGRKTHELAIRKGLETEVKVSTALVD 307
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM--ENKGVRPDS 458
MY K S E+ VF+ K +W A+IS +G + +F M EN RPD+
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN-NTRPDA 366
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
I + VL C G + + + F S + Y + +P + +V++ R G L A ++
Sbjct: 367 ILMVKVLGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 425
Query: 519 QIPGGPGLSVLQSLLGACRIHGN 541
I + V SL+ IHG
Sbjct: 426 GIALKDTV-VWTSLITGYGIHGK 447
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 199/378 (52%), Gaps = 13/378 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIG-VVFDAV 58
MY K G+ +AL +F+ L PDIV+W++++SGFEK+ A+ F RM + V D V
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 164
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T T +S C G +H +++ G +++ + N+L+ Y++ EA +F +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
KD +SW+ +++ Y Q+G EA+L +MM G + + AC +LE G
Sbjct: 225 AEKDVISWSTVIACYVQNGA-AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG 283
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MN 235
++ H ++I+ G T V V L+ Y KC +A VF R+ ++V+SW +IS +N
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN 343
Query: 236 --REDAVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
++ F M L+ P+ + + ++ + S +++ + H IK F S P +
Sbjct: 344 GMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI 403
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK--E 350
L+ +Y+R S+ ++ KVF+ ++ ++ + W +LI+GY +G A++ F ++K E
Sbjct: 404 GASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSE 463
Query: 351 SKPNAYTFGSVLNAVGAA 368
KPN TF S+L+A A
Sbjct: 464 VKPNEVTFLSILSACSHA 481
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 9/291 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
+N Y KS F +A+ +F + D++SW+TV++ + ++ A L N + G +
Sbjct: 205 LNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNV 264
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T L C G + H L ++ GL++EV V AL+ MY + EA VF
Sbjct: 265 ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSR 324
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P KD VSW A++SG+T +G I ++ R D + +C LE
Sbjct: 325 IPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQ 384
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---- 233
K H IK G+ ++ +G L+ YS+C G+A+KVF + ++ + WT++I+
Sbjct: 385 AKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGI 444
Query: 234 -MNREDAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
A+ F M + V PN+VTF+ ++ A S L+ EG I L +
Sbjct: 445 HGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMV 495
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K S +++++F E ++S + W ++ +L+R +E V+ F M +PD+ T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVGRLEEAEELVGQI 520
L CG ++ G + + KD + D Y S ++ M + GR+ EA + ++
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKD--VTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL 122
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/656 (32%), Positives = 352/656 (53%), Gaps = 20/656 (3%)
Query: 7 SGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLI--GVVFDAVTYS 61
+G A +F+ + + DIVSW +++ + SD+AL M ++ V D S
Sbjct: 53 AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS 112
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
L C +G LH+ VK L S VYVG++L+ MY R G++ ++ RVF EMP +
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR 172
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQI 181
++V+W AI++G G Y E + EM R D +F A AC + ++ GK I
Sbjct: 173 NAVTWTAIITGLVHAGRYK-EGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE---- 237
H I G+ T + V N L + Y++C D +F M +R+V+SWT++I +
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291
Query: 238 -DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
AV F +MR V PN+ TF + A + + + G +H + SV N +
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSM 351
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES--KPN 354
+ MY+ ++ + +F + CR+IISW+ +I GY Q G + +F +++S KP
Sbjct: 352 MKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFK-YFSWMRQSGTKPT 410
Query: 355 AYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRV 414
+ S+L+ G I + G++ H+ + GL+ + V S+L++MY K GSI E+ +
Sbjct: 411 DFALASLLSVSGNMAVI--EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
Query: 415 FNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMI 474
F ET + TA+I+ A HG + ++ F++ G RPDS+TF+SVLT C +G +
Sbjct: 469 FGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQL 528
Query: 475 HKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLG 534
G H F+ M + Y++ P+ +HY CMVD+L R GRL +AE+++ ++ V +LL
Sbjct: 529 DLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLI 588
Query: 535 ACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
AC+ G++E G R A+ +++++P + + V ++N+Y+ G+ E A +RK MK+KGV KE
Sbjct: 589 ACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKE 648
Query: 595 VGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL--GSEMKYLNSKRERAIAL 648
G W+ + D + F SGD HP+SE+IY + E G+E + +RA +
Sbjct: 649 PG--WSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAVSGAEAHRFDCTLKRAFGV 702
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 225/452 (49%), Gaps = 16/452 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MY + G+ DK+ +F+ + + V+W +++G + + L++ M+ + D
Sbjct: 150 LDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDT 209
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ AL C +G +H+ ++ G + + V N+L TMY+ G + + +F+
Sbjct: 210 YTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFEN 269
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D VSW +++ Y + G V+A+ I+M + + +F S SAC L
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQ-EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVW 328
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+Q+H + +G +SV N +M YS C A+ +F+ M R++ISW+T+I
Sbjct: 329 GEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQ 388
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ E+ F MR G P D L+ +++ GR +H L + +V
Sbjct: 389 AGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTV 448
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
+ LI MY++ S++++ +F E +I+S A+I+GYA++G S A+ F +K
Sbjct: 449 RSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGF 508
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDMYGKRGSIF 409
+P++ TF SVL A + + L + ++++ + P ++D+ + G +
Sbjct: 509 RPDSVTFISVLTACTHSGQLDLGFH---YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLS 565
Query: 410 ESQRVFNE-TQEKSEFAWTAIISALARHGDYE 440
+++++ NE + +K + WT ++ A GD E
Sbjct: 566 DAEKMINEMSWKKDDVVWTTLLIACKAKGDIE 597
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 363 bits (932), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 214/654 (32%), Positives = 366/654 (55%), Gaps = 19/654 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++ Y K G A +F+ + D VSWNT++SG+ K +DA M G D
Sbjct: 42 LDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDG 101
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++S L + F G Q+H L++K G + VYVG++L+ MY++ R+ +A F E
Sbjct: 102 YSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKE 161
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+ +SVSWNA+++G+ Q D L + M+ + +D +F + L
Sbjct: 162 ISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNL 221
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH-DRNVISWTTMIS--- 233
KQ+H +K+G +++ N ++S+Y+ C DA +VF + +++ISW +MI+
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFS 281
Query: 234 --MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+E A LF +M+ V + T+ GL+ A S G+ +HG+ IK S
Sbjct: 282 KHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTS 341
Query: 292 VCNCLITMYARFES--MQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
N LI+MY +F + M+D+ +F+ L +++ISWN++I+G+AQ GLS AV+ FF ++
Sbjct: 342 ATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVK-FFSYLR 400
Query: 350 ES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
S K + Y F ++L + ++ +L+ GQ+ H+ K G S+ V S+L+ MY K G
Sbjct: 401 SSEIKVDDYAFSALLRS--CSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGI 458
Query: 408 IFESQRVFNETQEK-SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
I +++ F + K S AW A+I A+HG + ++ F +M N+ V+ D +TF ++LT
Sbjct: 459 IESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILT 518
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G+I +G L + M Y I+P +HY+ VD+LGR G + +A+EL+ +P P
Sbjct: 519 ACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDP 578
Query: 527 SVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGM 586
VL++ LG CR G +EM ++A+ L+++EP +YV +S++Y++ WE A ++K M
Sbjct: 579 MVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMM 638
Query: 587 KSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNS 640
K +GV+K G+SW ++ + + F++ D ++P ++IY M + L EM++L+S
Sbjct: 639 KERGVKKVPGWSWIEIR--NQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQWLDS 690
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 224/451 (49%), Gaps = 14/451 (3%)
Query: 80 HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDY 139
H +K G S++YV N ++ Y ++G L A +FDEMP +DSVSWN ++SGYT G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 140 GVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNV 199
+A M R G +D SF+ K +LG+Q+HG+ IK GY +V VG+
Sbjct: 83 E-DAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 200 LMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPN 254
L+ Y+KCE DA + F+ + + N +SW +I+ + + A L M +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 255 DV-TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVF 313
D TF L+ + + +H +K E ++CN +I+ YA S+ D+++VF
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 314 DEL-SCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDI 371
D L +++ISWN++I+G++++ L +A + F + + + + YT+ +L+A E
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK--RGSIFESQRVFNETQEKSEFAWTAI 429
G+ H +IK GL+ +AL+ MY + G++ ++ +F + K +W +I
Sbjct: 322 IF--GKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSI 379
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I+ A+ G E + F + + ++ D F ++L C + G+ + K
Sbjct: 380 ITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGF 439
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
+ + S ++ M + G +E A + QI
Sbjct: 440 V-SNEFVISSLIVMYSKCGIIESARKCFQQI 469
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
+ H IK +S+ V N ++ Y +F + + +FDE+ R+ +SWN +ISGY G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 336 LSLAAVQAFFGVIKESKPNA--YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
L F +K S + Y+F +L + + + L G++ H +IK G + +
Sbjct: 81 -KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDL--GEQVHGLVIKGGYECNVY 137
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENK- 452
VGS+L+DMY K + ++ F E E + +W A+I+ + D ++ ME K
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA 197
Query: 453 GVRPDSITFLSVLTV 467
V D+ TF +LT+
Sbjct: 198 AVTMDAGTFAPLLTL 212
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 217/652 (33%), Positives = 361/652 (55%), Gaps = 19/652 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+++Y G A IF+N++ D V++NT+++G + + A+ RM+L G+ D+
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 58 VTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T ++ + C +G LF G QLH+ K G S + AL+ +Y++ + A F
Sbjct: 390 NTLASLVVAC-SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E ++ V WN +L Y D + +M + + + ++ S C +LE
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLR-NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
LG+QIH IK + + V +VL+ Y+K A + R ++V+SWTTMI+
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 234 -MNRED-AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N +D A++ F++M G+ ++V + A + +KEG+ IH + F S+
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
N L+T+Y+R +++S F++ + I+WNAL+SG+ Q+G + A++ F + +E
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 687
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
N +TFGS + A A+E ++K G++ H+ I K G DS+ V +AL+ MY K GSI +
Sbjct: 688 IDNNNFTFGSAVKA--ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISD 745
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+++ F E K+E +W AII+A ++HG ++ F +M + VRP+ +T + VL+ C
Sbjct: 746 AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 805
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G++ KG F+SM +Y + P P+HY C+VDML R G L A+E + ++P P V +
Sbjct: 806 IGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWR 865
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL AC +H N+E+GE A L+++EP S +YVL+SNLYA W+ + R+ MK KG
Sbjct: 866 TLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKG 925
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL---GSEMKYLN 639
V+KE G SW +V + +H F GD HP ++EI+ + L SE+ Y+
Sbjct: 926 VKKEPGQSWIEVK--NSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQ 975
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 261/525 (49%), Gaps = 15/525 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+++Y ++G D A +F+ L D SW ++SG K++ +A+ M ++G++
Sbjct: 229 IDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTP 288
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+S+ LS C E G QLH L++K G S+ YV NAL+++Y G L+ A +F
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D+V++N +++G +Q G YG +A+ M GL D + S AC + L
Sbjct: 349 MSQRDAVTYNTLINGLSQCG-YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM--- 234
G+Q+H + K+G+ ++ + L++ Y+KC A F NV+ W M+
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 235 --NREDAVSLFKEMRLDGVCPNDVTFIGLIHA-ISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ ++ +F++M+++ + PN T+ ++ I +G+L + G IH IKTNF
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL-ELGEQIHSQIIKTNFQLNAY 526
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
VC+ LI MYA+ + + + + ++++SW +I+GY Q A+ F ++
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 352 KPNAYTFGSVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + NAV A + +LK GQ+ H+ G SD +AL+ +Y + G I E
Sbjct: 587 IRSDEV--GLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 644
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
S F +T+ AW A++S + G+ E + F M +G+ ++ TF S +
Sbjct: 645 SYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASE 704
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+ +G+ + + K + + + + ++ M + G + +AE+
Sbjct: 705 TANMKQGKQVHAVITKTGY-DSETEVCNALISMYAKCGSISDAEK 748
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 149/562 (26%), Positives = 262/562 (46%), Gaps = 23/562 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+ Y G A +F+ + I +WN ++ + + +RM V +
Sbjct: 127 FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNE 186
Query: 58 VTYSTALSFCLDHE-GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+S L C F Q+H+ I+ GL V N LI +YSR G + ARRVFD
Sbjct: 187 GTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD 246
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ KD SW A++SG +++ + EAI +M G+ +F+S SAC ++LE
Sbjct: 247 GLRLKDHSSWVAMISGLSKN-ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MN 235
+G+Q+HG+ +K+G+ + V N L+S Y A +F M R+ +++ T+I+ ++
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 236 R----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E A+ LFK M LDG+ P+ T L+ A S + G+ +H K F S
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 425
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV---- 347
+ L+ +YA+ ++ + F E ++ WN ++ Y GL L ++ F +
Sbjct: 426 IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GL-LDDLRNSFRIFRQM 481
Query: 348 -IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
I+E PN YT+ S+L D+ L G++ HS IIK + V S L+DMY K G
Sbjct: 482 QIEEIVPNQYTYPSILKTCIRLGDLEL--GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 539
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ + + K +WT +I+ ++ + + F++M ++G+R D + + ++
Sbjct: 540 KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVS 599
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C + +G+ + P + +V + R G++EE+ Q G +
Sbjct: 600 ACAGLQALKEGQQIHAQACVSGFSSDLP-FQNALVTLYSRCGKIEESYLAFEQTEAGDNI 658
Query: 527 SVLQSLLGACRIHGNVEMGERI 548
+ +L+ + GN E R+
Sbjct: 659 A-WNALVSGFQQSGNNEEALRV 679
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 227/464 (48%), Gaps = 12/464 (2%)
Query: 67 CLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVS 125
CL G L G +LHS I+K GLDS + L Y G L A +VFDEMP + +
Sbjct: 94 CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFT 153
Query: 126 WNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASAC-GHEKNLELGKQIHGV 184
WN ++ G E + M+ + + + +F+ AC G ++ +QIH
Sbjct: 154 WNKMIKELASRNLIG-EVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHAR 212
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDA 239
+ G V N L+ YS+ A +VF + ++ SW MIS +A
Sbjct: 213 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEA 272
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ LF +M + G+ P F ++ A ++ G +HGL +K F S+ VCN L+++
Sbjct: 273 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 332
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTF 358
Y ++ +E +F +S R+ +++N LI+G +Q G A++ F + + +P++ T
Sbjct: 333 YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 392
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
S++ A A D +L GQ+ H++ K+G S+ + ALL++Y K I + F ET
Sbjct: 393 ASLVVACSA--DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+ ++ W ++ A D + F++M+ + + P+ T+ S+L C R G + G
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
+ ++K + + + S ++DM ++G+L+ A +++ + G
Sbjct: 511 QIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 129/287 (44%), Gaps = 13/287 (4%)
Query: 243 FKEMRLD-----GVCPNDVTFIGLIH-AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCL 296
F+E R+D G+ PN T L+ + + EGR +H +K S + L
Sbjct: 67 FQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKL 126
Query: 297 ITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNA 355
Y + + KVFDE+ R I +WN +I A L F ++ E+ PN
Sbjct: 127 FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNE 186
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
TF VL A ++ ++ H+ I+ GL +V + L+D+Y + G + ++RVF
Sbjct: 187 GTFSGVLEACRGG-SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
+ + K +W A+IS L+++ + F +M G+ P F SVL+ C + +
Sbjct: 246 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQI 520
G L +LK + S D Y C +V + +G L AE + +
Sbjct: 306 IGEQLHGLVLK---LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 360 bits (923), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 216/652 (33%), Positives = 369/652 (56%), Gaps = 24/652 (3%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMN-LIGVVFDA-- 57
+ KSG A +FN + + V+ N ++ G + ++A + MN +I V ++
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 58 VTYSTALSFCLDHE-GFLFGLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEARRVF 115
+ S+ + L E G G ++H ++ GL D V +GN L+ MY++ G + +ARRVF
Sbjct: 313 ILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF 372
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
M +KDSVSWN++++G Q+G + +EA+ M R + + S+ S+C K
Sbjct: 373 YFMTDKDSVSWNSMITGLDQNGCF-IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-SM 234
+LG+QIHG S+K+G +VSV N LM+ Y++ + K+F M + + +SW ++I ++
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Query: 235 NRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
R + AV F + G N +TF ++ A+S + + G+ IHGL +K N E
Sbjct: 492 ARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADE 551
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAAVQ-AFFGV 347
+ N LI Y + M EK+F ++ R+ ++WN++ISGY N L A+ +F +
Sbjct: 552 ATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFML 611
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ +++ + +VL+A + +L+ G H+ ++ L+SD +VGSAL+DMY K G
Sbjct: 612 QTGQRLDSFMYATVLSAFASVA--TLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLSVLT 466
+ + R FN ++ ++W ++IS ARHG E + F+ M+ G PD +TF+ VL+
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C G++ +G F+SM Y + P +H+SCM D+LGR G L++ E+ + ++P P +
Sbjct: 730 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNV 789
Query: 527 SVLQSLLGA-CRIHG-NVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+ +++LGA CR +G E+G++ A+ L ++EP + +YVL+ N+YA G WE + RK
Sbjct: 790 LIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARK 849
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
MK V+KE G+SW + DG+H F +GD +HP ++ IY+ + L +M+
Sbjct: 850 KMKDADVKKEAGYSWVTMK--DGVHMFVAGDKSHPDADVIYKKLKELNRKMR 899
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 250/498 (50%), Gaps = 28/498 (5%)
Query: 58 VTYSTALSF---CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+T LSF C+ H G HS + K LD +VY+ N LI Y G V AR+V
Sbjct: 1 MTNCVPLSFVQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKV 58
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH--E 172
FDEMP ++ VSW I+SGY+++G++ EA++ L +M+++G+ + +F S AC
Sbjct: 59 FDEMPLRNCVSWACIVSGYSRNGEHK-EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGS 117
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKC-EVTGDANKVFRRMHDRNVISWTTM 231
+ G+QIHG+ K+ Y V NVL+S Y KC G A F + +N +SW ++
Sbjct: 118 VGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSI 177
Query: 232 ISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLI-HAISIGNL-VKEGRMIHGLCIKT 284
IS+ ++ A +F M+ DG P + TF L+ A S+ V+ I K+
Sbjct: 178 ISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKS 237
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
L++ V + L++ +A+ S+ + KVF+++ R ++ N L+ G + A + F
Sbjct: 238 GLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Query: 345 FGV--IKESKPNAYT-FGSVLNAVGAAEDISLKHGQRCHSHIIKVGL-DSDPIVGSALLD 400
+ + + P +Y S AE++ LK G+ H H+I GL D +G+ L++
Sbjct: 298 MDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVN 357
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K GSI +++RVF +K +W ++I+ L ++G + + ++K M + P S T
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLK---DYHIEPSPDHYSCMVDMLGRVGRLEEAEELV 517
+S L+ C G+ + LK D ++ S + ++ + G L E ++
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVS----NALMTLYAETGYLNECRKIF 473
Query: 518 GQIPGGPGLSVLQSLLGA 535
+P +S S++GA
Sbjct: 474 SSMPEHDQVS-WNSIIGA 490
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 152/540 (28%), Positives = 266/540 (49%), Gaps = 24/540 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+N Y ++G A +F+ + + VSW ++SG+ ++ +AL F M G+ +
Sbjct: 43 INAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQ 102
Query: 58 VTYSTALSFC--LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW-GRLVEARRV 114
+ + L C + G LFG Q+H L+ K + V N LI+MY + G + A
Sbjct: 103 YAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCA 162
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTS-AASACG-HE 172
F ++ K+SVSWN+I+S Y+Q GD A M G R +F S +AC E
Sbjct: 163 FGDIEVKNSVSWNSIISVYSQAGDQR-SAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTE 221
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWT-TM 231
++ L +QI K G T + VG+ L+S ++K A KVF +M RN ++ M
Sbjct: 222 PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLM 281
Query: 232 ISMNR----EDAVSLFKEMR-LDGVCPND-VTFIGLIHAISIGNLV--KEGRMIHGLCIK 283
+ + R E+A LF +M + V P V + S+ V K+GR +HG I
Sbjct: 282 VGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVIT 341
Query: 284 TNFLS-EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
T + + N L+ MYA+ S+ D+ +VF ++ ++ +SWN++I+G QNG + AV+
Sbjct: 342 TGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVE 401
Query: 343 AFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
+ + + P ++T S L++ + + L GQ+ H +K+G+D + V +AL+ +
Sbjct: 402 RYKSMRRHDILPGSFTLISSLSSCASLKWAKL--GQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALAR-HGDYESVMNQFKEMENKGVRPDSIT 460
Y + G + E +++F+ E + +W +II ALAR + F + G + + IT
Sbjct: 460 YAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRIT 519
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
F SVL+ G+ + LK+ +I + ++ G+ G ++ E++ ++
Sbjct: 520 FSSVLSAVSSLSFGELGKQIHGLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRM 578
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 194/379 (51%), Gaps = 11/379 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDA 57
+NMY K G A +F + + D VSWN++++G +++ +A+ M ++ +
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGS 415
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T ++LS C + G Q+H +K G+D V V NAL+T+Y+ G L E R++F
Sbjct: 416 FTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSS 475
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
MP D VSWN+I+ + EA++ + R G +L+ ++F+S SA EL
Sbjct: 476 MPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL 535
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD-RNVISWTTMIS--M 234
GKQIHG+++K + N L++ Y KC K+F RM + R+ ++W +MIS +
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Query: 235 NRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ E A+ L M G + + ++ A + ++ G +H ++ S+
Sbjct: 596 HNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVV 655
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF--FGVIK 349
V + L+ MY++ + + + F+ + R SWN++ISGYA++G A++ F +
Sbjct: 656 VGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDG 715
Query: 350 ESKPNAYTFGSVLNAVGAA 368
++ P+ TF VL+A A
Sbjct: 716 QTPPDHVTFVGVLSACSHA 734
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 146/549 (26%), Positives = 261/549 (47%), Gaps = 41/549 (7%)
Query: 1 MNMYCKS-GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVT 59
++MY K G ALC F ++ + VSWN+++S + ++ D S A R +F ++
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRS-AFR------IFSSMQ 198
Query: 60 Y-----------STALSFC-LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
Y S + C L Q+ I K GL ++++VG+ L++ +++ G
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEA------ILALIEMMRKGLRLDHVS 161
L AR+VF++M +++V+ N ++ G + +G EA + ++I++ + + S
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQ-KWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGY-GTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
F + A E L+ G+++HG I G V +GN L++ Y+KC DA +VF M
Sbjct: 318 FPEYSLA--EEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375
Query: 221 HDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
D++ +SW +MI+ + +AV +K MR + P T I + + + K G+
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
IHG +K SV N L+T+YA + + K+F + + +SWN++I A++
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE 495
Query: 336 LSLA-AVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI 393
SL AV F + K N TF SVL+AV + L G++ H +K + +
Sbjct: 496 RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEAT 553
Query: 394 VGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYESVMNQFKEMENK 452
+AL+ YGK G + +++F+ E+ + W ++IS + ++ M
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 453 GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEE 512
G R DS + +VL+ + +G + ++ +E S +VDM + GRL+
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC-LESDVVVGSALVDMYSKCGRLDY 672
Query: 513 AEELVGQIP 521
A +P
Sbjct: 673 ALRFFNTMP 681
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 355 bits (911), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 215/658 (32%), Positives = 364/658 (55%), Gaps = 32/658 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLN---NPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVV 54
+++Y KSG KA +F + D+VSW+ +++ + + DA+ + +G+V
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG-LDSEVYVGNALITMYSRWGRLVE-AR 112
+ Y+ + C + + G ++K G +S+V VG +LI M+ + E A
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+VFD+M + V+W +++ Q G + EAI ++M+ G D + +S SAC
Sbjct: 224 KVFDKMSELNVVTWTLMITRCMQMG-FPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTG---DANKVFRRMHDRNVISWT 229
+NL LGKQ+H +I+ G V L+ Y+KC G D KVF RM D +V+SWT
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 230 TMISMNRE------DAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNL--VKEGRMIHGL 280
+I+ + +A++LF EM G V PN TF A GNL + G+ + G
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC--GNLSDPRVGKQVLGQ 398
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
K S SV N +I+M+ + + M+D+++ F+ LS + ++S+N + G +N L+
Sbjct: 399 AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN-LNFEQ 457
Query: 341 VQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
I E + +A+TF S+L+ G A S++ G++ HS ++K+GL + V +AL
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLS--GVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+ MY K GSI + RVFN + ++ +WT++I+ A+HG V+ F +M +GV+P+
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
+T++++L+ C G++ +G F+SM +D+ I+P +HY+CMVD+L R G L +A E +
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEM 578
+P + V ++ LGACR+H N E+G+ A +++++P +Y+ +SN+YA G WE
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 579 VAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
+R+ MK + + KE G SW +VG D +H F GD HP + +IY + L +E+K
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVG--DKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 240/479 (50%), Gaps = 26/479 (5%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D+VT+S+ L C+ F G +H+ +++F ++ + + N+LI++YS+ G +A VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 116 DEMP---NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
+ M +D VSW+A+++ Y +G ++AI +E + GL + +T+ AC +
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNG-RELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 173 KNLELGKQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVT-GDANKVFRRMHDRNVISWTT 230
+ +G+ G +K G + + V VG L+ + K E + +A KVF +M + NV++WT
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 231 MISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
MI+ + +A+ F +M L G + T + A + + G+ +H I++
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 286 FLSEPSVCNCLITMYARFE---SMQDSEKVFDELSCREIISWNALISGYAQN-GLSLAAV 341
+ + C+ L+ MYA+ S+ D KVFD + ++SW ALI+GY +N L+ A+
Sbjct: 300 LVDDVE-CS-LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 342 QAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F +I + +PN +TF S A G D + G++ K GL S+ V ++++
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV--GKQVLGQAFKRGLASNSSVANSVI 415
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
M+ K + ++QR F EK+ ++ + R+ ++E E+ + + +
Sbjct: 416 SMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAF 475
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEEL 516
TF S+L+ G I KG + ++K + S + C ++ M + G ++ A +
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVK---LGLSCNQPVCNALISMYSKCGSIDTASRV 531
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 208/412 (50%), Gaps = 22/412 (5%)
Query: 143 AILALIEMMRKGLR-LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLM 201
A+ AL M R G+R +D V+F+S +C ++ LGK +H I+ + N L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 202 STYSKCEVTGDANKVF---RRMHDRNVISWTTMISM----NRE-DAVSLFKEMRLDGVCP 253
S YSK + A VF RR R+V+SW+ M++ RE DA+ +F E G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 254 NDVTFIGLIHAISIGNLVKEGRMIHGLCIKT-NFLSEPSVCNCLITMYARFE-SMQDSEK 311
ND + +I A S + V GR+ G +KT +F S+ V LI M+ + E S +++ K
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFG-VIKESKPNAYTFGSVLNAVGAAED 370
VFD++S +++W +I+ Q G A++ F V+ + + +T SV +A E+
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK---RGSIFESQRVFNETQEKSEFAWT 427
+SL G++ HS I+ GL D V +L+DMY K GS+ + ++VF+ ++ S +WT
Sbjct: 285 LSL--GKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 428 AIISALARHGDYES-VMNQFKEMENKG-VRPDSITFLSVLTVCGRNGMIHKGRHLFDSML 485
A+I+ ++ + + +N F EM +G V P+ TF S CG G+ +
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 486 KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
K + + + ++ M + R+E+A+ + +S L G CR
Sbjct: 401 K-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 124/318 (38%), Gaps = 66/318 (20%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI---GVVFDA 57
++MY K G D A +FN + N +++SW ++++GF K A+ N + GV +
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 58 VTYSTALSFC----LDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
VTY LS C L EG+ +S+ + ++ ++ + R G L +A
Sbjct: 576 VTYVAILSACSHVGLVSEGWR---HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 114 VFDEMP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLD------HVSFTSAA 166
+ MP D + W L + + + A RK L LD ++ ++
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLAA-----RKILELDPNEPAAYIQLSNIY 687
Query: 167 SACGH------------EKNL---------ELGKQIHGVSIKMGYGTHVSVGNV------ 199
+ G E+NL E+G +IH + G H + +
Sbjct: 688 ACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYV--GDTAHPNAHQIYDELDR 745
Query: 200 LMSTYSKCEVTGDANKVFRRM---------------HDRNVISWTTMISMNREDAVSLFK 244
L++ +C D + V ++ H + +IS ++ V +FK
Sbjct: 746 LITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFK 805
Query: 245 EMRLDGVCPNDVTFIGLI 262
+R+ G C N + +I +
Sbjct: 806 NLRVCGDCHNAMKYISTV 823
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 355 bits (910), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 214/647 (33%), Positives = 351/647 (54%), Gaps = 19/647 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRM--NLIGVVFDAV 58
+ K+G A +F+ + + +V+W ++ + ++ D+A +M + + D V
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVY--VGNALITMYSRWGRLVEARRVFD 116
T++T L C D Q+H+ VK G D+ + V N L+ Y RL A +F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
E+P KDSV++N +++GY +DG Y E+I ++M + G + +F+ A +
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLY-TESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFA 267
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
LG+Q+H +S+ G+ SVGN ++ YSK + + +F M + + +S+ +IS
Sbjct: 268 LGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 235 ---NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E ++ F+EM+ G + F ++ + + ++ GR +H + S
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N L+ MYA+ E +++E +F L R +SW ALISGY Q GL A ++ F + +
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + TF +VL A +A SL G++ H+ II+ G + GS L+DMY K GSI +
Sbjct: 448 LRADQSTFATVLKA--SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ +VF E +++ +W A+ISA A +GD E+ + F +M G++PDS++ L VLT C
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
G + +G F +M Y I P HY+CM+D+LGR GR EAE+L+ ++P P +
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625
Query: 531 SLLGACRIHGNVEMGERIADALMKMEP-AGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
S+L ACRIH N + ER A+ L ME + +YV MSN+YA G+WE V ++K M+ +
Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
G++K +SW +V +H FSS D THP +EI R L +E++
Sbjct: 686 GIKKVPAYSWVEVN--HKIHVFSSNDQTHPNGDEIVRKINELTAEIE 730
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 169/654 (25%), Positives = 296/654 (45%), Gaps = 67/654 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ YC+ + D A +F + D V++NT+++G+EK +++ L+M G
Sbjct: 191 LKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSD 250
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+S L + F G QLH+L V G + VGN ++ YS+ R++E R +FDE
Sbjct: 251 FTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDE 310
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP D VS+N ++S Y+Q Y EA L EM G + F + S + +L+
Sbjct: 311 MPELDFVSYNVVISSYSQADQY--EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQ 368
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
+G+Q+H ++ + + VGN L+ Y+KCE+ +A +F+ + R +SWT +IS
Sbjct: 369 MGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYV 428
Query: 237 ED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + LF +MR + + TF ++ A + + G+ +H I++ L
Sbjct: 429 QKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVF 488
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ L+ MYA+ S++D+ +VF+E+ R +SWNALIS +A NG AA+ AF +I+
Sbjct: 489 SGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG 548
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS----DPIVG--------SAL 398
+P++ + VL A H ++ G + PI G + +
Sbjct: 549 LQPDSVSILGVLTACS-------------HCGFVEQGTEYFQAMSPIYGITPKKKHYACM 595
Query: 399 LDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
LD+ G+ G E++++ +E E E W+++++A H + +++ + D
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRD 655
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLK----------------DYHIEPSPDHYSCMV 501
+ ++S+ + G K R + +M + H+ S D
Sbjct: 656 AAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNG 715
Query: 502 DMLGR-VGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGS 560
D + R + L E G P SV+Q + +I ER+A A +
Sbjct: 716 DEIVRKINELTAEIEREGYKPDTS--SVVQDVDEQMKIESLKYHSERLAVAFALISTPEG 773
Query: 561 GSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSG 614
V+M NL A + + ++ SK V++E+ V D H FS G
Sbjct: 774 CPIVVMKNLRACRDCHAAIKLI-----SKIVKREIT-----VRDTSRFHHFSEG 817
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 135/531 (25%), Positives = 257/531 (48%), Gaps = 55/531 (10%)
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
FL ++ + I+K G D++ N ++ R G++ AR+V+DEMP+K++VS N ++SG
Sbjct: 29 FLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISG 88
Query: 133 YTQDGDYGV------------------------------EAILALIEMMRKG--LRLDHV 160
+ + GD EA +M R DHV
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTH--VSVGNVLMSTYSKCEVTGDANKVFR 218
+FT+ C Q+H ++K+G+ T+ ++V NVL+ +Y + A +F
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 219 RMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKE 273
+ +++ +++ T+I+ +D ++ LF +MR G P+D TF G++ A+ +
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 274 GRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQ 333
G+ +H L + T F + SV N ++ Y++ + + ++ +FDE+ + +S+N +IS Y+Q
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 334 NGLSLAAVQAF-----FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL 388
A++ F G + + P F ++L+ AA SL+ G++ H +
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFP----FATMLSI--AANLSSLQMGRQLHCQALLATA 382
Query: 389 DSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKE 448
DS VG++L+DMY K E++ +F +++ +WTA+IS + G + + + F +
Sbjct: 383 DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTK 442
Query: 449 MENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVG 508
M +R D TF +VL + G+ L +++ ++E + S +VDM + G
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCG 501
Query: 509 RLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+++A ++ ++P +S +L+ A H + GE A KM +G
Sbjct: 502 SIKDAVQVFEEMPDRNAVS-WNALISA---HADNGDGEAAIGAFAKMIESG 548
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 218/662 (32%), Positives = 355/662 (53%), Gaps = 32/662 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSG---FEKSD---DALSFALRMNLIGVV 54
+N+Y K G F +F+ ++ + VSWN+++S FEK + +A L N+
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
F V+ TA S EG + G Q+H+ ++ G + ++ N L+ MY + G+L ++ +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVL 258
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
+D V+WN +LS Q+ +EA+ L EM+ +G+ D + +S AC H +
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQL-LEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 175 LELGKQIHGVSIKMGYGTHVS-VGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI- 232
L GK++H ++K G S VG+ L+ Y C+ +VF M DR + W MI
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 233 --SMNRED--AVSLFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S N D A+ LF M G+ N T G++ A IHG +K
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG------LSLAAV 341
+ V N L+ MY+R + + ++F ++ R++++WN +I+GY + L L +
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 342 QAFFGVIKES------KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
Q + + KPN+ T ++L + A +L G+ H++ IK L +D VG
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALS--ALAKGKEIHAYAIKNNLATDVAVG 555
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
SAL+DMY K G + S++VF++ +K+ W II A HG+ + ++ + M +GV+
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P+ +TF+SV C +GM+ +G +F M DY +EPS DHY+C+VD+LGR GR++EA +
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ 675
Query: 516 LVGQIPGGPGLS-VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKG 574
L+ +P + SLLGA RIH N+E+GE A L+++EP + YVL++N+Y+ G
Sbjct: 676 LMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAG 735
Query: 575 DWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSE 634
W+ +R+ MK +GVRKE G SW + G D +H F +GD++HP+SE++ E L
Sbjct: 736 LWDKATEVRRNMKEQGVRKEPGCSWIEHG--DEVHKFVAGDSSHPQSEKLSGYLETLWER 793
Query: 635 MK 636
M+
Sbjct: 794 MR 795
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 140/536 (26%), Positives = 258/536 (48%), Gaps = 34/536 (6%)
Query: 48 MNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFG--LDSEVYVGNALITMYSRW 105
M ++G+ D + L D + G Q+H+ + KFG +DS V V N L+ +Y +
Sbjct: 88 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDS-VTVANTLVNLYRKC 146
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYT--QDGDYGVEAILALIEMMRKGLRLDHVSFT 163
G +VFD + ++ VSWN+++S + + +EA +++ + VS
Sbjct: 147 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 206
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
+A S + L +GKQ+H ++ G + N L++ Y K + + R
Sbjct: 207 TACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGR 265
Query: 224 NVISWTTMIS---MNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
++++W T++S N + +A+ +EM L+GV P++ T ++ A S +++ G+ +H
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 279 GLCIKTNFLSEPS-VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLS 337
+K L E S V + L+ MY + + +VFD + R+I WNA+I+GY+QN
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 385
Query: 338 LAAVQAFFGVIKESK---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIV 394
A+ F G ++ES N+ T V+ A + S K + H ++K GLD D V
Sbjct: 386 KEALLLFIG-MEESAGLLANSTTMAGVVPACVRSGAFSRK--EAIHGFVVKRGLDRDRFV 442
Query: 395 GSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALA---RHGDYESVMNQFKEMEN 451
+ L+DMY + G I + R+F + +++ W +I+ H D ++++ + +E
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 502
Query: 452 K--------GVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDM 503
K ++P+SIT +++L C + KG+ + +K+ ++ S +VDM
Sbjct: 503 KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDM 561
Query: 504 LGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+ G L+ + ++ QIP + ++ A +HGN G+ D L M G
Sbjct: 562 YAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---GQEAIDLLRMMMVQG 613
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 203/396 (51%), Gaps = 26/396 (6%)
Query: 142 EAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT-HVSVGNVL 200
EA+L ++M+ G++ D+ +F + A +++ELGKQIH K GYG V+V N L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 201 MSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPND 255
++ Y KC G KVF R+ +RN +SW ++IS E A+ F+ M + V P+
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 256 VTFIGLIHAIS---IGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKV 312
T + ++ A S + + G+ +H ++ L+ + N L+ MY + + S+ +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVL 258
Query: 313 FDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDI 371
R++++WN ++S QN L A++ ++ E +P+ +T SVL A E
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE-- 316
Query: 372 SLKHGQRCHSHIIKVG-LDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAII 430
L+ G+ H++ +K G LD + VGSAL+DMY + +RVF+ ++ W A+I
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 431 SALARH-GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK--- 486
+ +++ D E+++ E+ G+ +S T V+ C R+G + + ++K
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 487 --DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQI 520
D ++ + ++DM R+G+++ A + G++
Sbjct: 437 DRDRFVQ------NTLMDMYSRLGKIDIAMRIFGKM 466
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 123/241 (51%), Gaps = 12/241 (4%)
Query: 324 WNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
W L+ ++ L AV + +I KP+ Y F ++L AV +D+ L G++ H+H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL--GKQIHAH 122
Query: 383 IIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYES 441
+ K G D + V + L+++Y K G +VF+ E+++ +W ++IS+L +E
Sbjct: 123 VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 182
Query: 442 VMNQFKEMENKGVRPDSITFLSVLTVCGRNGM---IHKGRHLFDSMLKDYHIEPSPDHYS 498
+ F+ M ++ V P S T +SV+T C M + G+ + L+ E + +
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG--ELNSFIIN 240
Query: 499 CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA-CRIHGNVEMGERIADALMK-ME 556
+V M G++G+L ++ L+G GG L ++L + C+ +E E + + +++ +E
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSF-GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 557 P 557
P
Sbjct: 300 P 300
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 354 bits (908), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/646 (32%), Positives = 345/646 (53%), Gaps = 22/646 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MYCK + A +F+ + +I+S+N+++SG+ + + A+ L + D T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
Y+ AL FC + G LH L+V GL +V++ N LI MYS+ G+L +A +FD
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG---HEKNLE 176
+D VSWN+++SGY + G E + L +M R GL L + S AC +E +E
Sbjct: 211 ERDQVSWNSLISGYVRVGA-AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--- 233
G IH + K+G + V L+ Y+K +A K+F M +NV+++ MIS
Sbjct: 270 KGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Query: 234 -MNR------EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF 286
M+ +A LF +M+ G+ P+ TF ++ A S ++ GR IH L K NF
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
S+ + + LI +YA S +D + F S ++I SW ++I + QN +A F
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+ +P YT +++A A+ +L G++ + IK G+D+ V ++ + MY K
Sbjct: 450 LFSSHIRPEEYTVSLMMSA--CADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKS 507
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
G++ + +VF E Q ++A+IS+LA+HG +N F+ M+ G++P+ FL VL
Sbjct: 508 GNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVL 567
Query: 466 TVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
C G++ +G F M DY I P+ H++C+VD+LGR GRL +AE L+
Sbjct: 568 IACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDH 627
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
++LL +CR++ + +G+R+A+ LM++EP SGSYVL+ N+Y + G +R+
Sbjct: 628 PVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVREL 687
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
M+ +GV+KE SW +G + H F+ D +HP S+ IY M E +
Sbjct: 688 MRDRGVKKEPALSWIVIG--NQTHSFAVADLSHPSSQMIYTMLETM 731
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 357/646 (55%), Gaps = 16/646 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G A +F+ + ++VS+ +V++G+ ++ +A+ L+M +V D
Sbjct: 109 LSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQ 168
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ + + C G QLH+ ++K S + NALI MY R+ ++ +A RVF
Sbjct: 169 FAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYG 228
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLE 176
+P KD +SW++I++G++Q G + EA+ L EM+ G+ + F S+ AC +
Sbjct: 229 IPMKDLISWSSIIAGFSQLG-FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--M 234
G QIHG+ IK + G L Y++C A +VF ++ + SW +I+
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 235 NR---EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
N ++AVS+F +MR G P+ ++ L+ A + + +G IH IK FL++ +
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLT 407
Query: 292 VCNCLITMYARFESMQDSEKVFDEL-SCREIISWNALISGYAQNGLSLAAVQAF-FGVIK 349
VCN L+TMY + +F++ + + +SWN +++ Q+ + ++ F ++
Sbjct: 408 VCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVS 467
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
E +P+ T G++L G E SLK G + H + +K GL + + + L+DMY K GS+
Sbjct: 468 ECEPDHITMGNLLR--GCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLG 525
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
+++R+F+ + +W+ +I A+ G E + FKEM++ G+ P+ +TF+ VLT C
Sbjct: 526 QARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACS 585
Query: 470 RNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
G++ +G L+ +M ++ I P+ +H SC+VD+L R GRL EAE + ++ P + V
Sbjct: 586 HVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVW 645
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSK 589
++LL AC+ GNV + ++ A+ ++K++P S ++VL+ +++A G+WE A+LR MK
Sbjct: 646 KTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKH 705
Query: 590 GVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
V+K G SW ++ D +H F + D HP ++IY + + S+M
Sbjct: 706 DVKKIPGQSWIEIE--DKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 137/266 (51%), Gaps = 5/266 (1%)
Query: 257 TFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDEL 316
T+I LI A S + +GR IH + +N + + N +++MY + S++D+ +VFD +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 317 SCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKH 375
R ++S+ ++I+GY+QNG A++ + +++E P+ + FGS++ A ++ D+ L
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL-- 186
Query: 376 GQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALAR 435
G++ H+ +IK+ S I +AL+ MY + + ++ RVF K +W++II+ ++
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 436 HGDYESVMNQFKEMENKGV-RPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSP 494
G ++ KEM + GV P+ F S L C G + +K + +
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS-ELAGNA 305
Query: 495 DHYSCMVDMLGRVGRLEEAEELVGQI 520
+ DM R G L A + QI
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQI 331
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSH 382
N I+ ++ A++AF K S K T+ S++ A ++ SL G++ H H
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSR--SLAQGRKIHDH 92
Query: 383 IIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESV 442
I+ D I+ + +L MYGK GS+ +++ VF+ E++ ++T++I+ +++G
Sbjct: 93 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD--HYSCM 500
+ + +M + + PD F S++ C + + G+ L ++K +E S + +
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK---LESSSHLIAQNAL 209
Query: 501 VDMLGRVGRLEEAEELVGQIP 521
+ M R ++ +A + IP
Sbjct: 210 IAMYVRFNQMSDASRVFYGIP 230
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 352 bits (902), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 346/615 (56%), Gaps = 30/615 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALR----MNLIGVVFD 56
+++Y K G +A+ +F+ + NP +VSW +LSG+ KS+DA S AL M GV +
Sbjct: 292 VDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFS-ALEIFKEMRHSGVEIN 350
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF- 115
T ++ +S C Q+H+ + K G + V ALI+MYS+ G + + +VF
Sbjct: 351 NCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFE 410
Query: 116 --DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
D++ ++ V N +++ ++Q G +AI M+++GLR D S S S
Sbjct: 411 DLDDIQRQNIV--NVMITSFSQSKKPG-KAIRLFTRMLQEGLRTDEFSVCSLLSVL---D 464
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
L LGKQ+HG ++K G ++VG+ L + YSKC ++ K+F+ + ++ W +MIS
Sbjct: 465 CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMIS 524
Query: 234 MNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
E +A+ LF EM DG P++ T ++ S + G+ IHG ++
Sbjct: 525 GFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDK 584
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+ + L+ MY++ S++ + +V+D L + +S ++LISGY+Q+GL +Q F +
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGL----IQDGFLLF 640
Query: 349 KESKPNAYT-----FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
++ + +T S+L A +++ SL G + H++I K+GL ++P VGS+LL MY
Sbjct: 641 RDMVMSGFTMDSFAISSILKAAALSDESSL--GAQVHAYITKIGLCTEPSVGSSLLTMYS 698
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K GSI + + F++ AWTA+I++ A+HG + + M+ KG +PD +TF+
Sbjct: 699 KFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVG 758
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGG 523
VL+ C G++ + +SM+KDY IEP HY CMVD LGR GRL EAE + +
Sbjct: 759 VLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIK 818
Query: 524 PGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILR 583
P V +LL AC+IHG VE+G+ A +++EP+ +G+Y+ +SN+ AE G+W+ V R
Sbjct: 819 PDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETR 878
Query: 584 KGMKSKGVRKEVGFS 598
K MK GV+KE G+S
Sbjct: 879 KLMKGTGVQKEPGWS 893
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 158/558 (28%), Positives = 283/558 (50%), Gaps = 25/558 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++ Y SG A +F+ + PD+VS N ++SG+++ +++L F +M+ +G +
Sbjct: 91 LSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANE 150
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
++Y + +S C + LF + +K G V +ALI ++S+ R +A +VF +
Sbjct: 151 ISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRD 210
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLE 176
+ + WN I++G ++ +YG A+ L M G + D +++S +AC + L
Sbjct: 211 SLSANVYCWNTIIAGALRNQNYG--AVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLR 268
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--M 234
GK + IK G V V ++ Y+KC +A +VF R+ + +V+SWT M+S
Sbjct: 269 FGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYT 327
Query: 235 NREDAVS---LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
DA S +FKEMR GV N+ T +I A ++V E +H K+ F + S
Sbjct: 328 KSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSS 387
Query: 292 VCNCLITMYARFESMQDSEKVF---DELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
V LI+MY++ + SE+VF D++ + I+ N +I+ ++Q+ A++ F ++
Sbjct: 388 VAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRML 445
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+E + + ++ S+L+ + L G++ H + +K GL D VGS+L +Y K GS
Sbjct: 446 QEGLRTDEFSVCSLLSVLDC-----LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS 500
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ES ++F K W ++IS +G + F EM + G PD T +VLTV
Sbjct: 501 LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C + + +G+ + L+ I+ D S +V+M + G L+ A ++ ++P +S
Sbjct: 561 CSSHPSLPRGKEIHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVS 619
Query: 528 VLQSLLGACRIHGNVEMG 545
SL+ HG ++ G
Sbjct: 620 C-SSLISGYSQHGLIQDG 636
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 150/575 (26%), Positives = 282/575 (49%), Gaps = 42/575 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFD---- 56
++++ K+ +F+ A +F + + ++ WNT+++G ALR G VFD
Sbjct: 192 IDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAG----------ALRNQNYGAVFDLFHE 241
Query: 57 ---------AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR 107
+ TYS+ L+ C E FG + + ++K G + +V+V A++ +Y++ G
Sbjct: 242 MCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGH 300
Query: 108 LVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAAS 167
+ EA VF +PN VSW +LSGYT+ D A+ EM G+ +++ + TS S
Sbjct: 301 MAEAMEVFSRIPNPSVVSWTVMLSGYTKSND-AFSALEIFKEMRHSGVEINNCTVTSVIS 359
Query: 168 ACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHD---RN 224
ACG + Q+H K G+ SV L+S YSK + +VF + D +N
Sbjct: 360 ACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN 419
Query: 225 VIS-WTTMISMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
+++ T S +++ A+ LF M +G+ ++ + L+ + NL G+ +HG
Sbjct: 420 IVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL---GKQVHGYT 476
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
+K+ + + +V + L T+Y++ S+++S K+F + ++ W ++ISG+ + G A+
Sbjct: 477 LKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAI 536
Query: 342 QAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLD 400
F ++ + + P+ T +VL + SL G+ H + ++ G+D +GSAL++
Sbjct: 537 GLFSEMLDDGTSPDESTLAAVLTVCSSHP--SLPRGKEIHGYTLRAGIDKGMDLGSALVN 594
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
MY K GS+ +++V++ E + +++IS ++HG + F++M G DS
Sbjct: 595 MYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFA 654
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLK-DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQ 519
S+L + G + + K EPS S ++ M + G +++ + Q
Sbjct: 655 ISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG--SSLLTMYSKFGSIDDCCKAFSQ 712
Query: 520 IPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
I GP L +L+ + HG ++ + LMK
Sbjct: 713 I-NGPDLIAWTALIASYAQHGKANEALQVYN-LMK 745
Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 217/458 (47%), Gaps = 28/458 (6%)
Query: 77 LQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQD 136
LQ H L+ ++ L +V++ +L++ YS G + +A ++FD +P D VS N ++SGY Q
Sbjct: 70 LQAH-LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQH 128
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
+ E++ +M G + +S+ S SAC + + + +IKMGY + V
Sbjct: 129 RLFE-ESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVV 187
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLFKEMRLDGV 251
+ L+ +SK DA KVFR NV W T+I+ N LF EM +
Sbjct: 188 ESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ 247
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ T+ ++ A + ++ G+++ IK + VC ++ +YA+ M ++ +
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAME 306
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKP-----NAYTFGSVLNAVG 366
VF + ++SW ++SGY ++ + +A++ F KE + N T SV++A G
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIF----KEMRHSGVEINNCTVTSVISACG 362
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE-KSEFA 425
+ + H+ + K G D V +AL+ MY K G I S++VF + + + +
Sbjct: 363 RPSMVC--EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI 420
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV--CGRNGMIHKGRHLFDS 483
+I++ ++ + F M +G+R D + S+L+V C G G L
Sbjct: 421 VNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSG 480
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
++ D + S + + + G LEE+ +L IP
Sbjct: 481 LVLDLTVGSS------LFTLYSKCGSLEESYKLFQGIP 512
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 351 bits (901), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 209/639 (32%), Positives = 346/639 (54%), Gaps = 28/639 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTY 60
+ S + AL +F+ +N D WN ++ GF +A+ F RM GV D TY
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+ G ++H++++K G S+VYV N+LI++Y + G +A +VF+EMP
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D VSWN+++SGY GD G +++ EM++ G + D S SA AC H + ++GK+
Sbjct: 194 RDIVSWNSMISGYLALGD-GFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 181 IHGVSIKMGYGTHVSVGNVLMST-----YSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
IH +++ + + G+V++ T YSK A ++F M RN+++W MI
Sbjct: 253 IHCHAVR----SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCY 308
Query: 236 RE-----DAVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
DA F++M +G+ P+ +T I L+ A +I EGR IHG ++ FL
Sbjct: 309 ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAI----LEGRTIHGYAMRRGFLPH 364
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
+ LI MY ++ +E +FD ++ + +ISWN++I+ Y QNG + +A++ F +
Sbjct: 365 MVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWD 424
Query: 350 ES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
S P++ T S+L A AE +SL G+ H++I+K S+ I+ ++L+ MY G +
Sbjct: 425 SSLVPDSTTIASILPAY--AESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++++ FN K +W +II A A HG + F EM V P+ TF S+L C
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+GM+ +G F+SM ++Y I+P +HY CM+D++GR G A+ + ++P P +
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
SLL A R H ++ + E A+ + KME +G YVL+ N+YAE G WE V ++ M+S
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMES 662
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
KG+ + S + H F++GD +H + +IY +
Sbjct: 663 KGISRTSSRSTVEAKGKS--HVFTNGDRSHVATNKIYEV 699
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 223/450 (49%), Gaps = 18/450 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL-SFALRMNLIGVVFDAVT 59
+++Y K G A +F + DIVSWN+++SG+ D S L ++ F
Sbjct: 172 ISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDR 231
Query: 60 YST--ALSFCLDHEGFLFGLQLHSLIVKFGLDS-EVYVGNALITMYSRWGRLVEARRVFD 116
+ST AL C G ++H V+ +++ +V V +++ MYS++G + A R+F+
Sbjct: 232 FSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFN 291
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-GLRLDHVSFTSAASACGHEKNL 175
M ++ V+WN ++ Y ++G +A L +M + GL+ D ++ + A +
Sbjct: 292 GMIQRNIVAWNVMIGCYARNGRV-TDAFLCFQKMSEQNGLQPDVITSINLLPASA----I 346
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G+ IHG +++ G+ H+ + L+ Y +C A +F RM ++NVISW ++I+
Sbjct: 347 LEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAY 406
Query: 236 RED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
++ A+ LF+E+ + P+ T ++ A + + EGR IH +K+ + S
Sbjct: 407 VQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNT 466
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
+ N L+ MYA ++D+ K F+ + ++++SWN++I YA +G +V F +I
Sbjct: 467 IILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS 526
Query: 351 S-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
PN TF S+L A + + + + S + G+D +LD+ G+ G+
Sbjct: 527 RVNPNKSTFASLLAACSISGMVD-EGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFS 585
Query: 410 ESQRVFNETQ-EKSEFAWTAIISALARHGD 438
++R E + W ++++A H D
Sbjct: 586 AAKRFLEEMPFVPTARIWGSLLNASRNHKD 615
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 351 bits (901), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 209/614 (34%), Positives = 328/614 (53%), Gaps = 18/614 (2%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGV--VFDAV 58
Y G A +F + ++S+N V+ + + DA+S +RM GV V D
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
TY + + GL +H I++ + YV NAL+ MY +G++ AR VFD M
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
N+D +SWN ++SGY ++G Y +A++ M+ + + LDH + S CGH K+LE+G
Sbjct: 179 KNRDVISWNTMISGYYRNG-YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED 238
+ +H + + G + V N L++ Y KC +A VF RM R+VI+WT MI+ ED
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 239 -----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
A+ L + M+ +GV PN VT L+ V +G+ +HG ++ S+ +
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-K 352
LI+MYA+ + + +VF S W+A+I+G QN L A+ F + +E +
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
PN T S+L A A D L+ H ++ K G S + L+ +Y K G++ +
Sbjct: 418 PNIATLNSLLPAYAALAD--LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAH 475
Query: 413 RVFNETQEKSE----FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++FN QEK + W A+IS HGD + + F EM GV P+ ITF S L C
Sbjct: 476 KIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNAC 535
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G++ +G LF ML+ Y +HY+C+VD+LGR GRL+EA L+ IP P +V
Sbjct: 536 SHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTV 595
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
+LL AC H NV++GE A+ L ++EP +G+YVL++N+YA G W+ + +R M++
Sbjct: 596 WGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMEN 655
Query: 589 KGVRKEVGFSWADV 602
G+RK+ G S ++
Sbjct: 656 VGLRKKPGHSTIEI 669
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 251/518 (48%), Gaps = 34/518 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+ MY G+ + A +F+ + N D++SWNT++SG+ ++ +DAL M V D
Sbjct: 159 LAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDH 218
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T + L C + G +H L+ + L ++ V NAL+ MY + GR+ EAR VFD
Sbjct: 219 ATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDR 278
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLE 176
M +D ++W +++GYT+DGD VE L L +M+ +G+R + V+ S S CG +
Sbjct: 279 MERRDVITWTCMINGYTEDGD--VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVN 336
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--M 234
GK +HG +++ + + + L+S Y+KC+ +VF + W+ +I+ +
Sbjct: 337 DGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCV 396
Query: 235 NRE---DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
E DA+ LFK MR + V PN T L+ A + +++ IH KT F+S
Sbjct: 397 QNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLD 456
Query: 292 VCNCLITMYARFESMQDSEKVFDELS----CREIISWNALISGYAQNGLSLAAVQAFFGV 347
L+ +Y++ +++ + K+F+ + ++++ W ALISGY +G A+Q F +
Sbjct: 457 AATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM 516
Query: 348 IKES-KPNAYTFGSVLNAVGAA----EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
++ PN TF S LNA + E ++L H + IV D+
Sbjct: 517 VRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIV-----DLL 571
Query: 403 GKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDY---ESVMNQFKEMENKGVRPDS 458
G+ G + E+ + E + W A+++A H + E N+ E+E + +
Sbjct: 572 GRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENT-GNY 630
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDH 496
+ ++ GR + K R SM+++ + P H
Sbjct: 631 VLLANIYAALGRWKDMEKVR----SMMENVGLRKKPGH 664
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 213/442 (48%), Gaps = 24/442 (5%)
Query: 93 YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR 152
++ + L Y+ G + AR++F+EMP +S+N ++ Y ++G Y +AI I M+
Sbjct: 50 HILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYH-DAISVFIRMVS 108
Query: 153 KGLRL--DHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
+G++ D ++ A A G K+++LG +HG ++ +G V N L++ Y
Sbjct: 109 EGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV 168
Query: 211 GDANKVFRRMHDRNVISWTTMIS-------MNREDAVSLFKEMRLDGVCPNDVTFIGLIH 263
A VF M +R+VISW TMIS MN DA+ +F M + V + T + ++
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMN--DALMMFDWMVNESVDLDHATIVSMLP 226
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
++ GR +H L + + V N L+ MY + M ++ VFD + R++I+
Sbjct: 227 VCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVIT 286
Query: 324 WNALISGYAQNG-----LSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQR 378
W +I+GY ++G L L + F GV +PNA T S+++ G A + + G+
Sbjct: 287 WTCMINGYTEDGDVENALELCRLMQFEGV----RPNAVTIASLVSVCGDA--LKVNDGKC 340
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H ++ + SD I+ ++L+ MY K + RVF+ + W+AII+ ++
Sbjct: 341 LHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNEL 400
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS 498
+ FK M + V P+ T S+L + + ++ + K + S D +
Sbjct: 401 VSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMS-SLDAAT 459
Query: 499 CMVDMLGRVGRLEEAEELVGQI 520
+V + + G LE A ++ I
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGI 481
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 189/567 (33%), Positives = 318/567 (56%), Gaps = 14/567 (2%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDG 137
Q+H+ ++ GL ++ LI S +G + AR+VFD++P WNAI+ GY+++
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 138 DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVG 197
+ +A+L M + D +F AC +L++G+ +H ++G+ V V
Sbjct: 99 HFQ-DALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 198 NVLMSTYSKCEVTGDANKVFR--RMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDG 250
N L++ Y+KC G A VF + +R ++SWT ++S + +A+ +F +MR
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 251 VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSE 310
V P+ V + +++A + +K+GR IH +K EP + L TMYA+ + ++
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 311 KVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI-KESKPNAYTFGSVLNAVGAAE 369
+FD++ +I WNA+ISGYA+NG + A+ F +I K+ +P+ + S ++A A+
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA--CAQ 335
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL+ + + ++ + D + SAL+DM+ K GS+ ++ VF+ T ++ W+A+
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I HG ++ ++ ME GV P+ +TFL +L C +GM+ +G F+ M D+
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHK 454
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I P HY+C++D+LGR G L++A E++ +P PG++V +LL AC+ H +VE+GE A
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
L ++P+ +G YV +SNLYA W+ VA +R MK KG+ K+VG SW +V L
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR--GRLE 572
Query: 610 GFSSGDNTHPRSEEIYRMAECLGSEMK 636
F GD +HPR EEI R E + S +K
Sbjct: 573 AFRVGDKSHPRYEEIERQVEWIESRLK 599
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 216/445 (48%), Gaps = 15/445 (3%)
Query: 8 GQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVVFDAVTYSTAL 64
G A +F++L P I WN ++ G+ +++ DAL M L V D+ T+ L
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD--EMPNKD 122
C G +H+ + + G D++V+V N LI +Y++ RL AR VF+ +P +
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSW AI+S Y Q+G+ +EA+ +M + ++ D V+ S +A ++L+ G+ IH
Sbjct: 187 IVSWTAIVSAYAQNGE-PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE----- 237
+KMG + L + Y+KC A +F +M N+I W MIS +
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLI 297
+A+ +F EM V P+ ++ I A + +++ R ++ ++++ + + + LI
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 298 TMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
M+A+ S++ + VFD R+++ W+A+I GY +G + A+ + + + PN
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
TF +L A + + + G + + ++ + ++D+ G+ G + ++ V
Sbjct: 426 TFLGLLMACNHSGMV--REGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
Query: 417 -ETQEKSEFAWTAIISALARHGDYE 440
+ W A++SA +H E
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVE 508
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 170/339 (50%), Gaps = 12/339 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPD--IVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
+Y K + A +F L P+ IVSW ++S + ++ + AL +M + V D
Sbjct: 163 LYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDW 222
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
V + L+ + G +H+ +VK GL+ E + +L TMY++ G++ A+ +FD+
Sbjct: 223 VALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M + + + WNA++SGY ++G Y EAI EM+ K +R D +S TSA SAC +LE
Sbjct: 283 MKSPNLILWNAMISGYAKNG-YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
+ ++ + Y V + + L+ ++KC A VF R DR+V+ W+ MI
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+A+SL++ M GV PNDVTF+GL+ A + +V+EG +
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQH 461
Query: 293 CNCLITMYARFESMQDSEKVFDELSCRE-IISWNALISG 330
C+I + R + + +V + + + W AL+S
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 101/254 (39%), Gaps = 42/254 (16%)
Query: 377 QRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARH 436
++ H+ ++ +GL + + L+ G I +++VF++ F W AII +R+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 437 GDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-----DYHIE 491
++ + + M+ V PDS TF +L C + GR + + + D ++
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 492 -----------------------PSPDH----YSCMVDMLGRVGRLEEAEELVGQIPG-- 522
P P+ ++ +V + G EA E+ Q+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 523 -GPGLSVLQSLLGACRIHGNVEMGERIADALMKM----EPAGSGSYVLMSNLYAEKGDWE 577
P L S+L A +++ G I +++KM EP + ++ +YA+ G
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP---DLLISLNTMYAKCGQVA 274
Query: 578 MVAILRKGMKSKGV 591
IL MKS +
Sbjct: 275 TAKILFDKMKSPNL 288
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
++M+ K G + A +F+ + D+V W+ ++ G+ ++ +A+S M GV +
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 58 VTYSTALSFCLDHEGFLF-GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT+ L C +H G + G + + ++ + +I + R G L +A V
Sbjct: 425 VTFLGLLMAC-NHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
Query: 117 EMPNKDSVS-WNAILSG-----YTQDGDYGVEAILAL 147
MP + V+ W A+LS + + G+Y + + ++
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSI 520
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 210/667 (31%), Positives = 348/667 (52%), Gaps = 38/667 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MY K +F ++L +F + + VSW+ +++G +++ AL F M +
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 281
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
Y++ L C G QLH+ +K ++ V A + MY++ + +A+ +FD
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
N + S+NA+++GY+Q+ ++G +A+L +M GL D +S + AC K L
Sbjct: 342 SENLNRQSYNAMITGYSQE-EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G QI+G++IK V V N + Y KC+ +A +VF M R+ +SW +I+ + +
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 460
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ + LF M + P++ TF ++ A + G+L G IH +K+ S SV
Sbjct: 461 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL-GYGMEIHSSIVKSGMASNSSV 519
Query: 293 CNCLITMYARFESMQDSEKVFDELSCRE--------------------IISWNALISGYA 332
LI MY++ ++++EK+ R +SWN++ISGY
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 579
Query: 333 QNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
S A Q F + E P+ +T+ +VL+ L G++ H+ +IK L S
Sbjct: 580 MKEQSEDA-QMLFTRMMEMGITPDKFTYATVLDTCANLASAGL--GKQIHAQVIKKELQS 636
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
D + S L+DMY K G + +S+ +F ++ + W A+I A HG E + F+ M
Sbjct: 637 DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
+ ++P+ +TF+S+L C G+I KG F M +DY ++P HYS MVD+LG+ G++
Sbjct: 697 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 756
Query: 511 EEAEELVGQIPGGPGLSVLQSLLGACRIH-GNVEMGERIADALMKMEPAGSGSYVLMSNL 569
+ A EL+ ++P + ++LLG C IH NVE+ E AL++++P S +Y L+SN+
Sbjct: 757 KRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNV 816
Query: 570 YAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAE 629
YA+ G WE V+ LR+ M+ ++KE G SW ++ D LH F GD HPR EEIY
Sbjct: 817 YADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELK--DELHVFLVGDKAHPRWEEIYEELG 874
Query: 630 CLGSEMK 636
+ SEMK
Sbjct: 875 LIYSEMK 881
Score = 245 bits (625), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 272/544 (50%), Gaps = 38/544 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS---FALRMNLIGVVFDA 57
+N Y KS KA FN + D+VSWN++LSG+ ++ ++L + M G+ FD
Sbjct: 121 INGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDG 180
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T++ L C E G+Q+H ++V+ G D++V +AL+ MY++ R VE+ RVF
Sbjct: 181 RTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG 240
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P K+SVSW+AI++G Q+ + A+ EM + + + S +C L L
Sbjct: 241 IPEKNSVSWSAIIAGCVQNNLLSL-ALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 299
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
G Q+H ++K + V + Y+KC+ DA +F + N S+ MI+ +
Sbjct: 300 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 359
Query: 238 D-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
+ A+ LF + G+ ++++ G+ A ++ + EG I+GL IK++ + V
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES- 351
N I MY + +++ ++ +VFDE+ R+ +SWNA+I+ + QNG + F +++
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+P+ +TFGS+L A SL +G HS I+K G+ S+ VG +L+DMY K G I E+
Sbjct: 480 EPDEFTFGSILKACTGG---SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 412 QRVFNE---------TQEKSE-----------FAWTAIISALARHGDYESVMNQFKEMEN 451
+++ + T E+ E +W +IIS E F M
Sbjct: 537 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 596
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGR 509
G+ PD T+ +VL C G+ + ++K E D Y C +VDM + G
Sbjct: 597 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGD 653
Query: 510 LEEA 513
L ++
Sbjct: 654 LHDS 657
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 224/432 (51%), Gaps = 11/432 (2%)
Query: 91 EVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEM 150
+V N +I YS+ + +A F+ MP +D VSWN++LSGY Q+G+ +++I ++M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGE-SLKSIEVFVDM 171
Query: 151 MRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
R+G+ D +F C ++ LG QIHG+ +++G T V + L+ Y+K +
Sbjct: 172 GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRF 231
Query: 211 GDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAI 265
++ +VF+ + ++N +SW+ +I+ ++ A+ FKEM+ + + ++ +
Sbjct: 232 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 291
Query: 266 SIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWN 325
+ + ++ G +H +K++F ++ V + MYA+ ++MQD++ +FD S+N
Sbjct: 292 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYN 351
Query: 326 ALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHII 384
A+I+GY+Q A+ F ++ + + V A + +S G + + I
Sbjct: 352 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLS--EGLQIYGLAI 409
Query: 385 KVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMN 444
K L D V +A +DMYGK ++ E+ RVF+E + + +W AII+A ++G +
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 469
Query: 445 QFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDML 504
F M + PD TF S+L C G + G + S++K S S ++DM
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCS-LIDMY 527
Query: 505 GRVGRLEEAEEL 516
+ G +EEAE++
Sbjct: 528 SKCGMIEEAEKI 539
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 134/309 (43%), Gaps = 43/309 (13%)
Query: 217 FRRMH-DRNVISW----TTMISMNREDAVSLFKEM--RLDGVCPNDVTFIGLIHAISIGN 269
R +H R+V+S+ T IS R + S F + +++ V + +F+ +
Sbjct: 5 LRLLHMTRSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFV--FKECAKQG 62
Query: 270 LVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALI- 328
++ G+ H I + F V NCL+ +Y + VFD++ R+++SWN +I
Sbjct: 63 ALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMIN 122
Query: 329 ------------------------------SGYAQNGLSLAAVQAFFGVIKES-KPNAYT 357
SGY QNG SL +++ F + +E + + T
Sbjct: 123 GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 182
Query: 358 FGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNE 417
F +L ED SL G + H +++VG D+D + SALLDMY K ES RVF
Sbjct: 183 FAIILKVCSFLEDTSL--GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG 240
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
EK+ +W+AII+ ++ + FKEM+ + SVL C + G
Sbjct: 241 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300
Query: 478 RHLFDSMLK 486
L LK
Sbjct: 301 GQLHAHALK 309
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 172/394 (43%), Gaps = 46/394 (11%)
Query: 160 VSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRR 219
+F+ C + LELGKQ H I G+ V N L+ Y+ A+ VF +
Sbjct: 49 TNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDK 108
Query: 220 MHDRNVISWTTMIS-----------------MNREDAVS-------------------LF 243
M R+V+SW MI+ M D VS +F
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
+M +G+ + TF ++ S G IHG+ ++ ++ + L+ MYA+
Sbjct: 169 VDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNA----YTFG 359
+ +S +VF + + +SW+A+I+G QN L L+ FF ++ K NA +
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNL-LSLALKFFKEMQ--KVNAGVSQSIYA 285
Query: 360 SVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQ 419
SVL + A ++ L G + H+H +K +D IV +A LDMY K ++ ++Q +F+ ++
Sbjct: 286 SVLRSCAALSELRL--GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 420 EKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRH 479
+ ++ A+I+ ++ + F + + G+ D I+ V C + +G
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 480 LFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEA 513
++ +K + + +DM G+ L EA
Sbjct: 404 IYGLAIKS-SLSLDVCVANAAIDMYGKCQALAEA 436
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 345 bits (884), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 209/651 (32%), Positives = 346/651 (53%), Gaps = 30/651 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIG-VVFD 56
+ M+ + G A +F ++ ++ SWN ++ G+ K D+A+ RM +G V D
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
T+ L C G ++H +V++G + ++ V NALITMY + G + AR +FD
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255
Query: 117 EMPNKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDH--VSFTSAASACGHE 172
MP +D +SWNA++SGY ++G G+E A+ +GL +D ++ TS SAC
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAM-----RGLSVDPDLMTLTSVISACELL 310
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ LG+ IH I G+ +SV N L Y +A K+F RM ++++SWTTMI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 233 S-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S + A+ ++ M D V P+++T ++ A + + G +H L IK +
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
S V N LI MY++ + + + +F + + +ISW ++I+G N A+ +
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 348 IKESKPNAYTFGSVLNA---VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+PNA T + L A +GA L G+ H+H+++ G+ D + +ALLDMY +
Sbjct: 491 KMTLQPNAITLTAALAACARIGA-----LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVR 545
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + + FN +Q+K +W +++ + G V+ F M VRPD ITF+S+
Sbjct: 546 CGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISL 604
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L C ++ M+ +G F M +DY + P+ HY+C+VD+LGR G L+EA + + ++P P
Sbjct: 605 LCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTP 663
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+V +LL ACRIH +++GE A + +++ G Y+L+ NLYA+ G W VA +R+
Sbjct: 664 DPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRR 723
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
MK G+ + G SW +V +H F S D HP+++EI + E +M
Sbjct: 724 MMKENGLTVDAGCSWVEVK--GKVHAFLSDDKYHPQTKEINTVLEGFYEKM 772
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 234/485 (48%), Gaps = 14/485 (2%)
Query: 37 KSDDALSFALRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGN 96
K ++A+ M + V D + + C G +++S+ + V +GN
Sbjct: 74 KLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGN 133
Query: 97 ALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLR 156
A + M+ R+G LV+A VF +M ++ SWN ++ GY + G + L + G++
Sbjct: 134 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVK 193
Query: 157 LDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKV 216
D +F CG +L GK++H ++ GY + V N L++ Y KC A +
Sbjct: 194 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 217 FRRMHDRNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLV 271
F RM R++ISW MIS E + + LF MR V P+ +T +I A +
Sbjct: 254 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDR 313
Query: 272 KEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGY 331
+ GR IH I T F + SVCN L MY S +++EK+F + ++I+SW +ISGY
Sbjct: 314 RLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Query: 332 AQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
N L A+ + + ++S KP+ T +VL+A D L G H IK L S
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGD--LDTGVELHKLAIKARLIS 431
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
IV + L++MY K I ++ +F+ K+ +WT+II+ L + + ++M+
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK 491
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY--SCMVDMLGRVG 508
++P++IT + L C R G + G+ + +L+ D + + ++DM R G
Sbjct: 492 -MTLQPNAITLTAALAACARIGALMCGKEIHAHVLR---TGVGLDDFLPNALLDMYVRCG 547
Query: 509 RLEEA 513
R+ A
Sbjct: 548 RMNTA 552
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 211/641 (32%), Positives = 335/641 (52%), Gaps = 27/641 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI------GVV 54
+N Y K G+ KA IFN + D+VSWN++++G+ ++ S M L ++
Sbjct: 56 VNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDIL 115
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
+A T + + G Q H+L+VK ++YV +L+ MY + G + + +V
Sbjct: 116 PNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKV 175
Query: 115 FDEMPNKDSVSWNAILSGYTQDG--DYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
F MP +++ +W+ ++SGY G + ++ + +G D+V FT+ S+
Sbjct: 176 FAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAAT 234
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ LG+QIH ++IK G V++ N L++ YSKCE +A K+F DRN I+W+ M+
Sbjct: 235 IYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 233 ---SMNRE--DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
S N E +AV LF M G+ P++ T +G+++A S ++EG+ +H +K F
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN-----GLSLAAVQ 342
L+ MYA+ + D+ K FD L R++ W +LISGY QN L L
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 343 AFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMY 402
G+I PN T SVL A + + L G++ H H IK G + +GSAL MY
Sbjct: 415 KTAGII----PNDPTMASVLKACSSLATLEL--GKQVHGHTIKHGFGLEVPIGSALSTMY 468
Query: 403 GKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFL 462
K GS+ + VF T K +W A+IS L+ +G + + F+EM +G+ PD +TF+
Sbjct: 469 SKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFV 528
Query: 463 SVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPG 522
++++ C G + +G F+ M ++P DHY+CMVD+L R G+L+EA+E +
Sbjct: 529 NIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANI 588
Query: 523 GPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAIL 582
GL + + LL AC+ HG E+G + LM + S +YV +S +Y G V +
Sbjct: 589 DHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERV 648
Query: 583 RKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEE 623
K M++ GV KEVG SW ++ + H F GD HP EE
Sbjct: 649 WKHMRANGVSKEVGCSWIELK--NQYHVFVVGDTMHPMIEE 687
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 245/461 (53%), Gaps = 23/461 (4%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G +H I++ G + + N L+ Y++ G+L +A +F+ + KD VSWN++++GY+Q
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 136 DGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG---HEKNLE---LGKQIHGVSIKMG 189
+G G+ + ++++ R+ +R + +A + G E +L+ +G+Q H + +KM
Sbjct: 93 NG--GISSSYTVMQLFRE-MRAQDI-LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 190 YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--MNR---EDAV---S 241
+ V L+ Y K + D KVF M +RN +W+TM+S R E+A+ +
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 242 LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYA 301
LF + +G +D F ++ +++ V GR IH + IK L ++ N L+TMY+
Sbjct: 209 LFLREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYS 267
Query: 302 RFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGS 360
+ ES+ ++ K+FD R I+W+A+++GY+QNG SL AV+ F + KP+ YT
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327
Query: 361 VLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQE 420
VLNA ++ L+ G++ HS ++K+G + +AL+DMY K G + ++++ F+ QE
Sbjct: 328 VLNA--CSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE 385
Query: 421 KSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHL 480
+ WT++IS ++ D E + ++ M+ G+ P+ T SVL C + G+ +
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
Query: 481 FDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
+K P S + M + G LE+ + + P
Sbjct: 446 HGHTIKHGFGLEVPIG-SALSTMYSKCGSLEDGNLVFRRTP 485
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 234/510 (45%), Gaps = 76/510 (14%)
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
++NL G+ +HG I+ G T + NVL++ Y+KC A+ +F + ++V+SW +
Sbjct: 26 QQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNS 85
Query: 231 MISMNRED--------AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCI 282
+I+ ++ + LF+EMR + PN T G+ A S GR H L +
Sbjct: 86 LITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV 145
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQ 342
K + + V L+ MY + ++D KVF + R +W+ ++SGYA G A++
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIK 205
Query: 343 AFFGVIKESKPNA---YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALL 399
F ++E + + Y F +VL+++ A + L G++ H IK GL + +AL+
Sbjct: 206 VFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGL--GRQIHCITIKNGLLGFVALSNALV 263
Query: 400 DMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSI 459
MY K S+ E+ ++F+ + +++ W+A+++ +++G+ + F M + G++P
Sbjct: 264 TMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEY 323
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLK---DYHIEPSPDHYSCMVDMLGRVGRLEEA--- 513
T + VL C + +G+ L +LK + H+ + + +VDM + G L +A
Sbjct: 324 TIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFAT----TALVDMYAKAGCLADARKG 379
Query: 514 --------------------------EELV--------GQIPGGPGLSVLQSLLGACRIH 539
E L+ G IP P ++ S+L AC
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMA---SVLKACSSL 436
Query: 540 GNVEMGERIADALMK----ME-PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
+E+G+++ +K +E P GS +S +Y++ G E ++ + +K V
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPIGSA----LSTMYSKCGSLEDGNLVFRRTPNKDV--- 489
Query: 595 VGFSWADVGDIDGLHGFSSGDNTHPRSEEI 624
SW + I GL GD EE+
Sbjct: 490 --VSWNAM--ISGLSHNGQGDEALELFEEM 515
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 122/244 (50%), Gaps = 14/244 (5%)
Query: 253 PNDVTFIG-LIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ T + L H NLV GR +HG I+T + N L+ YA+ + +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVA-GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHS 70
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK-----PNAYTFGSVLNAVG 366
+F+ + C++++SWN+LI+GY+QNG +++ + +E + PNAYT + A
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNG-GISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 367 AAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAW 426
+ + ++ G++ H+ ++K+ D V ++L+ MY K G + + +VF E++ + W
Sbjct: 130 SLQSSTV--GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTW 187
Query: 427 TAIISALARHGDYE---SVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
+ ++S A G E V N F + +G D + F +VL+ + GR +
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCI 246
Query: 484 MLKD 487
+K+
Sbjct: 247 TIKN 250
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 98/229 (42%), Gaps = 16/229 (6%)
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+++ N +T + ++ +L G+ H II+ G + + L++ Y K G +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 410 ESQRVFNETQEKSEFAWTAIISALARHGDYES---VMNQFKEMENKGVRPDSITFLSVLT 466
++ +FN K +W ++I+ +++G S VM F+EM + + P++ T +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 467 VCGRNGMIHKGRHLFDSMLK-----DYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
GR ++K D +++ S +V M + G +E+ ++ +P
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTS------LVGMYCKAGLVEDGLKVFAYMP 180
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGS-YVLMSNL 569
+++ G VE ++ + ++ + GS S YV + L
Sbjct: 181 -ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVL 228
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 342 bits (878), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 219/690 (31%), Positives = 346/690 (50%), Gaps = 72/690 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPD--IVSWNTVLSGFEK---SDDALSFALRMNLIGVVF 55
++ Y G A+ + D + WN+++ + ++ L M+ +
Sbjct: 66 ISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTP 125
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D T+ C + G H+L + G S V+VGNAL+ MYSR L +AR+VF
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-----GLRLDHVSFTSAASACG 170
DEM D VSWN+I+ Y + G V +EM + G R D+++ + C
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVA-----LEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
LGKQ+H ++ ++ VGN L+ Y+KC + +AN VF M ++V+SW
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 231 MIS----MNR-EDAVSLFKEMRLD--------------------------GVC------- 252
M++ + R EDAV LF++M+ + GVC
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 253 --PNDVTFIGLIHAISIGNLVKEGRMIHGLCIK-------TNFLSEPSVCNCLITMYARF 303
PN+VT I ++ + + G+ IH IK E V N LI MYA+
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 304 ESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKE---SKPNAYTF 358
+ + + +FD LS R++++W +I GY+Q+G + A++ + +E ++PNA+T
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNE 417
L V A +L+ G++ H++ ++ ++ P+ V + L+DMY K GSI +++ VF+
Sbjct: 481 SCAL--VACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 418 TQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKG 477
K+E WT++++ HG E + F EM G + D +T L VL C +GMI +G
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Query: 478 RHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACR 537
F+ M + + P P+HY+C+VD+LGR GRL A L+ ++P P V + L CR
Sbjct: 599 MEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCR 658
Query: 538 IHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGF 597
IHG VE+GE A+ + ++ GSY L+SNLYA G W+ V +R M+ KGV+K G
Sbjct: 659 IHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGC 718
Query: 598 SWADVGDIDGLHGFSSGDNTHPRSEEIYRM 627
SW V I G F GD THP ++EIY++
Sbjct: 719 SW--VEGIKGTTTFFVGDKTHPHAKEIYQV 746
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 170/353 (48%), Gaps = 13/353 (3%)
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM--HDRNVISWTT 230
K + K IH + G T +++ + L+STY A + RR D V W +
Sbjct: 39 KTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 231 MISMNREDAVS-----LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I ++ + LF M P++ TF + A + V+ G H L + T
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F+S V N L+ MY+R S+ D+ KVFDE+S +++SWN++I YA+ G A++ F
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 346 GVIKE--SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ E +P+ T +VL + SL G++ H + + + VG+ L+DMY
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSL--GKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 404 KRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLS 463
K G + E+ VF+ K +W A+++ ++ G +E + F++M+ + ++ D +T+ +
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 464 VLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
++ + G+ ++ + ML I+P+ ++ VG L +E+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKEI 387
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 342 bits (877), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 207/639 (32%), Positives = 357/639 (55%), Gaps = 23/639 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-DIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFD 56
++MY K+ A +F+ D V WN++LS + KS + L M++ G +
Sbjct: 224 VSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPN 283
Query: 57 AVTYSTALSFCLDHEGFLF---GLQLHSLIVKFGL-DSEVYVGNALITMYSRWGRLVEAR 112
+ T +AL+ C +GF + G ++H+ ++K SE+YV NALI MY+R G++ +A
Sbjct: 284 SYTIVSALTAC---DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAE 340
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHE 172
R+ +M N D V+WN+++ GY Q+ Y EA+ +M+ G + D VS TS +A G
Sbjct: 341 RILRQMNNADVVTWNSLIKGYVQNLMYK-EALEFFSDMIAAGHKSDEVSMTSIIAASGRL 399
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
NL G ++H IK G+ +++ VGN L+ YSKC +T + F RMHD+++ISWTT+I
Sbjct: 400 SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVI 459
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + +A+ LF+++ + +++ ++ A S+ + + IH ++ L
Sbjct: 460 AGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL 519
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
+ + N L+ +Y + +M + +VF+ + ++++SW ++IS A NG AV+ F +
Sbjct: 520 -DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM 578
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGS 407
+ E+ +A + + AA +L G+ H ++++ G + + A++DMY G
Sbjct: 579 V-ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 637
Query: 408 IFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTV 467
+ ++ VF+ + K +T++I+A HG ++ + F +M ++ V PD I+FL++L
Sbjct: 638 LQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 697
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLS 527
C G++ +GR M +Y +EP P+HY C+VDMLGR + EA E V + P
Sbjct: 698 CSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAE 757
Query: 528 VLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMK 587
V +LL ACR H E+GE A L+++EP G+ VL+SN++AE+G W V +R MK
Sbjct: 758 VWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMK 817
Query: 588 SKGVRKEVGFSWADVGDIDG-LHGFSSGDNTHPRSEEIY 625
+ G+ K G SW ++DG +H F++ D +HP S+EIY
Sbjct: 818 ASGMEKHPGCSWI---EMDGKVHKFTARDKSHPESKEIY 853
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 291/582 (50%), Gaps = 22/582 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDAVT 59
MY K G D A +F+ + + +WNT++ + + + AL+ M + GV +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+ L C G +LHSL+VK G S ++ NAL++MY++ L ARR+FD
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 120 NK-DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K D+V WN+ILS Y+ G +E + EM G + + SA +AC +LG
Sbjct: 245 EKGDAVLWNSILSSYSTSGK-SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303
Query: 179 KQIHGVSIKMG-YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
K+IH +K + + + V N L++ Y++C A ++ R+M++ +V++W ++I
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEPS 291
++ ++A+ F +M G ++V+ +I A + NL+ G +H IK + S
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLA-GMELHAYVIKHGWDSNLQ 422
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
V N LI MY++ + F + +++ISW +I+GYAQN + A++ F V K+
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 352 -KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
+ + GS+L A + + + + H HI++ GL D ++ + L+D+YGK ++
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIV--KEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGY 539
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+ RVF + K +WT++IS+ A +G+ + F+ M G+ DS+ L +L+
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 471 NGMIHKGRHLFDSML-KDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVL 529
++KGR + +L K + +E S +VDM G L+ A+ + +I GL
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIE-RKGLLQY 656
Query: 530 QSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
S++ A +HG + + D M+ E ++ LYA
Sbjct: 657 TSMINAYGMHGCGKAAVELFDK-MRHENVSPDHISFLALLYA 697
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 214/420 (50%), Gaps = 20/420 (4%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVK----FGLDSEVYVGNALITMYSRWGRLVEARRV 114
++ L C G QLHS I K F LD ++ L+ MY + G L +A +V
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD---FLAGKLVFMYGKCGSLDDAEKV 138
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEK 173
FDEMP++ + +WN ++ Y +G+ + LAL MR +G+ L SF + AC +
Sbjct: 139 FDEMPDRTAFAWNTMIGAYVSNGEPA--SALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISWTTMI 232
++ G ++H + +K+GY + + N L+S Y+K + A ++F ++ + + W +++
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN-F 286
S + + LF+EM + G PN T + + A + K G+ IH +K++
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 287 LSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFG 346
SE VCN LI MY R M +E++ +++ ++++WN+LI GY QN + A++ F
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKR 405
+I K + + S++ A G + L G H+++IK G DS+ VG+ L+DMY K
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSN--LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 434
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
R F +K +WT +I+ A++ + + F+++ K + D + S+L
Sbjct: 435 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 494
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 130/260 (50%), Gaps = 19/260 (7%)
Query: 271 VKEGRMIHGLCIKT------NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
V +GR +H KT +FL+ L+ MY + S+ D+EKVFDE+ R +W
Sbjct: 96 VSQGRQLHSRIFKTFPSFELDFLAGK-----LVFMYGKCGSLDDAEKVFDEMPDRTAFAW 150
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKESKP-NAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
N +I Y NG +A+ ++ + E P +F ++L A DI + G HS +
Sbjct: 151 NTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDI--RSGSELHSLL 208
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE-FAWTAIISALARHGDYESV 442
+K+G S + +AL+ MY K + ++R+F+ QEK + W +I+S+ + G
Sbjct: 209 VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLET 268
Query: 443 MNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--M 500
+ F+EM G P+S T +S LT C G+ + S+LK S + Y C +
Sbjct: 269 LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS--THSSELYVCNAL 326
Query: 501 VDMLGRVGRLEEAEELVGQI 520
+ M R G++ +AE ++ Q+
Sbjct: 327 IAMYTRCGKMPQAERILRQM 346
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 348 IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV--GLDSDPIVGSALLDMYGKR 405
+ E+ F VL G +S G++ HS I K + D + G L+ MYGK
Sbjct: 73 VSENNSPVEAFAYVLELCGKRRAVS--QGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKC 129
Query: 406 GSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
GS+ ++++VF+E +++ FAW +I A +G+ S + + M +GV +F ++L
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 466 TVCGRNGMIHKGRHLFDSMLK-DYH 489
C + I G L ++K YH
Sbjct: 190 KACAKLRDIRSGSELHSLLVKLGYH 214
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 341 bits (875), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 213/647 (32%), Positives = 338/647 (52%), Gaps = 26/647 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLN-NPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVF 55
+N+Y A +F N + D+ WN+++SG+ K+ D F +N V
Sbjct: 46 INVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVP 105
Query: 56 DAVTYSTALSF--CLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
D+ T+ + L E G +H+L+VK G +V V ++L+ MY+++ + +
Sbjct: 106 DSFTFPNVIKAYGALGRE--FLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQ 163
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHE 172
VFDEMP +D SWN ++S + Q G+ E L L M G + VS T A SAC
Sbjct: 164 VFDEMPERDVASWNTVISCFYQSGE--AEKALELFGRMESSGFEPNSVSLTVAISACSRL 221
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
LE GK+IH +K G+ V + L+ Y KC+ A +VF++M +++++W +MI
Sbjct: 222 LWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMI 281
Query: 233 SM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ + V + M ++G P+ T ++ A S + G+ IHG I++
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN 341
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGV 347
++ V LI +Y + +E VF + SWN +IS Y G AV+ + +
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401
Query: 348 IKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ KP+ TF SVL A ++ +L+ G++ H I + L++D ++ SALLDMY K G
Sbjct: 402 VSVGVKPDVVTFTSVLPA--CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCG 459
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ E+ R+FN +K +WT +ISA HG + QF EM+ G++PD +T L+VL+
Sbjct: 460 NEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP-GGPG 525
CG G+I +G F M Y IEP +HYSCM+D+LGR GRL EA E++ Q P
Sbjct: 520 ACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDN 579
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+L +L AC +H +G+RIA L++ P + +Y+++ NLYA W+ +R
Sbjct: 580 AELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLK 639
Query: 586 MKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLG 632
MK G+RK+ G SW ++ D + F + D +H R+E +Y ECL
Sbjct: 640 MKEMGLRKKPGCSWIEMS--DKVCHFFAEDRSHLRAENVY---ECLA 681
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 340 bits (872), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 210/658 (31%), Positives = 353/658 (53%), Gaps = 24/658 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY + G +A +F+ + D+VSWN+++SG+ ++AL + +V D+
Sbjct: 148 VDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDS 207
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T S+ L + G LH +K G++S V V N L+ MY ++ R +ARRVFDE
Sbjct: 208 FTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDE 267
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL---RLDHVSFTSAASACGHEKN 174
M +DSVS+N ++ GY + +E + + M + L + D ++ +S ACGH ++
Sbjct: 268 MDVRDSVSYNTMICGYLK-----LEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRD 322
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
L L K I+ +K G+ +V N+L+ Y+KC A VF M ++ +SW ++IS
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISG 382
Query: 235 NRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
+ +A+ LFK M + + +T++ LI + +K G+ +H IK+ +
Sbjct: 383 YIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID 442
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
SV N LI MYA+ + DS K+F + + ++WN +IS + G +Q + K
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK 502
Query: 350 -ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
E P+ TF L + L G+ H +++ G +S+ +G+AL++MY K G +
Sbjct: 503 SEVVPDMATFLVTLPMCASLAAKRL--GKEIHCCLLRFGYESELQIGNALIEMYSKCGCL 560
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
S RVF + WT +I A +G+ E + F +ME G+ PDS+ F++++ C
Sbjct: 561 ENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYAC 620
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G++ +G F+ M Y I+P +HY+C+VD+L R ++ +AEE + +P P S+
Sbjct: 621 SHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASI 680
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
S+L ACR G++E ER++ ++++ P G +L SN YA W+ V+++RK +K
Sbjct: 681 WASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKD 740
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK---YLNSKRE 643
K + K G+SW +VG +H FSSGD++ P+SE IY+ E L S M Y+ RE
Sbjct: 741 KHITKNPGYSWIEVG--KNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPRE 796
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 165/571 (28%), Positives = 287/571 (50%), Gaps = 21/571 (3%)
Query: 13 ALCIFNNLNNP-DIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYSTALSFCL 68
+L +F ++ ++ WN+++ F K+ +AL F ++ V D T+ + + C
Sbjct: 58 SLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA 117
Query: 69 DHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNA 128
G ++ I+ G +S+++VGNAL+ MYSR G L AR+VFDEMP +D VSWN+
Sbjct: 118 GLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNS 177
Query: 129 ILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
++SGY+ G Y EA+ E+ + D + +S A G+ ++ G+ +HG ++K
Sbjct: 178 LISGYSSHGYYE-EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKS 236
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-----MNREDAVSLF 243
G + V V N L++ Y K DA +VF M R+ +S+ TMI E++V +F
Sbjct: 237 GVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF 296
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
E LD P+ +T ++ A + + I+ +K F+ E +V N LI +YA+
Sbjct: 297 LE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKC 355
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-FGVIKESKPNAYTFGSVL 362
M + VF+ + C++ +SWN++ISGY Q+G + A++ F +I E + + T+ ++
Sbjct: 356 GDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Query: 363 NAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKS 422
+ D LK G+ HS+ IK G+ D V +AL+DMY K G + +S ++F+
Sbjct: 416 SVSTRLAD--LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGD 473
Query: 423 EFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFD 482
W +ISA R GD+ + + +M V PD TFL L +C G+ +
Sbjct: 474 TVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHC 533
Query: 483 SMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNV 542
+L+ + E + +++M + G LE + + ++ + + G +G
Sbjct: 534 CLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRD----VVTWTGMIYAYGMY 588
Query: 543 EMGERIADALMKMEPAG--SGSYVLMSNLYA 571
GE+ + ME +G S V ++ +YA
Sbjct: 589 GEGEKALETFADMEKSGIVPDSVVFIAIIYA 619
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 250/488 (51%), Gaps = 17/488 (3%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM-PNKDSVSWNAILSGYTQD 136
++H+L++ GLDS + LI YS + + VF + P K+ WN+I+ ++++
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKN 84
Query: 137 GDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSV 196
G + EA+ ++ + D +F S AC + E+G ++ + MG+ + + V
Sbjct: 85 GLFP-EALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 197 GNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----EDAVSLFKEMRLDGV 251
GN L+ YS+ + A +VF M R+++SW ++IS E+A+ ++ E++ +
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 252 CPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
P+ T ++ A GNL VK+G+ +HG +K+ S V N L+ MY +F D+
Sbjct: 204 VPDSFTVSSVLPA--FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDA 261
Query: 310 EKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAE 369
+VFDE+ R+ +S+N +I GY + + +V+ F + + KP+ T SVL A G
Sbjct: 262 RRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLR 321
Query: 370 DISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
D+SL + +++++K G + V + L+D+Y K G + ++ VFN + K +W +I
Sbjct: 322 DLSL--AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKD-Y 488
IS + GD M FK M + D IT+L +++V R + G+ L + +K
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 489 HIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERI 548
I+ S + ++DM + G + ++ ++ + G ++ +++ AC G+ G ++
Sbjct: 440 CIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISACVRFGDFATGLQV 496
Query: 549 ADALMKME 556
+ K E
Sbjct: 497 TTQMRKSE 504
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 222/475 (46%), Gaps = 30/475 (6%)
Query: 159 HVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFR 218
VS + A NL ++IH + I +G + L+ YS + VFR
Sbjct: 4 RVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFR 63
Query: 219 RMHD-RNVISWTTMISMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVK 272
R+ +NV W ++I + +A+ + ++R V P+ TF +I A + +
Sbjct: 64 RVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123
Query: 273 EGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYA 332
G +++ + F S+ V N L+ MY+R + + +VFDE+ R+++SWN+LISGY+
Sbjct: 124 MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 333 QNGLSLAAVQAFFGVIKES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDS 390
+G A++ + +K S P+++T SVL A G + +K GQ H +K G++S
Sbjct: 184 SHGYYEEALEIYHE-LKNSWIVPDSFTVSSVLPAFGNL--LVVKQGQGLHGFALKSGVNS 240
Query: 391 DPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEME 450
+V + L+ MY K +++RVF+E + ++ +I + E + F E
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL 300
Query: 451 NKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRL 510
++ +PD +T SVL CG + +++++ MLK + S + ++D+ + G +
Sbjct: 301 DQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR-NILIDVYAKCGDM 358
Query: 511 EEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM-EPAGSGSYVLMSNL 569
A ++ + +S S++ G++ ++ +M M E A +Y+++ ++
Sbjct: 359 ITARDVFNSMECKDTVS-WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 570 YAEKGDWEMVAILRKGMKSKGVRKEVGFS----------WADVGDI-DGLHGFSS 613
D + KG+ S G++ + +A G++ D L FSS
Sbjct: 418 STRLADLK----FGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSS 468
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 321/563 (57%), Gaps = 23/563 (4%)
Query: 76 GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
G Q+H ++K G + N LI MY + + A +VFD MP ++ VSW+A++SG+
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 136 DGDYGVEAILALI-EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
+GD ++ L+L EM R+G+ + +F++ ACG LE G QIHG +K+G+ V
Sbjct: 85 NGD--LKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMV 142
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS--------MNREDAVSLFKEM 246
VGN L+ YSKC +A KVFRR+ DR++ISW MI+ D + +E
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 247 RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNF--LSEPSVCNCLITMYARFE 304
+ P++ T L+ A S ++ G+ IHG +++ F S ++ L+ +Y +
Sbjct: 203 NIKER-PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261
Query: 305 SMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE--SKPNAYTFGSVL 362
+ + K FD++ + +ISW++LI GYAQ G + A+ F ++E S+ +++ S+
Sbjct: 262 YLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM-GLFKRLQELNSQIDSFALSSI- 319
Query: 363 NAVGAAEDISL-KHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEK 421
+G D +L + G++ + +K+ + V ++++DMY K G + E+++ F E Q K
Sbjct: 320 --IGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK 377
Query: 422 SEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLF 481
+WT +I+ +HG + + F EM + PD + +L+VL+ C +GMI +G LF
Sbjct: 378 DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELF 437
Query: 482 DSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGN 541
+L+ + I+P +HY+C+VD+LGR GRL+EA+ L+ +P P + + Q+LL CR+HG+
Sbjct: 438 SKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 497
Query: 542 VEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWAD 601
+E+G+ + L++++ +YV+MSNLY + G W R+ KG++KE G SW +
Sbjct: 498 IELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVE 557
Query: 602 VGDIDGLHGFSSGDNTHPRSEEI 624
+ +H F SG+++HP + I
Sbjct: 558 IE--REVHFFRSGEDSHPLTPVI 578
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 235/455 (51%), Gaps = 18/455 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDD---ALSFALRMNLIGVVFDA 57
++MYCK + A +F+++ ++VSW+ ++SG + D +LS M G+ +
Sbjct: 48 IDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNE 107
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ST L C GLQ+H +K G + V VGN+L+ MYS+ GR+ EA +VF
Sbjct: 108 FTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRR 167
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL--RLDHVSFTSAASACGHEKNL 175
+ ++ +SWNA+++G+ G YG +A+ M + R D + TS AC +
Sbjct: 168 IVDRSLISWNAMIAGFVHAG-YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 226
Query: 176 ELGKQIHGVSIKMGY--GTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS 233
GKQIHG ++ G+ + ++ L+ Y KC A K F ++ ++ +ISW+++I
Sbjct: 227 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 286
Query: 234 MNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ +A+ LFK ++ + +I + L+++G+ + L +K
Sbjct: 287 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 346
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
E SV N ++ MY + + ++EK F E+ +++ISW +I+GY ++GL +V+ F+ ++
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406
Query: 349 KES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRG 406
+ + +P+ + +VL+A + I K G+ S +++ G+ + ++D+ G+ G
Sbjct: 407 RHNIEPDEVCYLAVLSACSHSGMI--KEGEELFSKLLETHGIKPRVEHYACVVDLLGRAG 464
Query: 407 SIFESQRVFNETQEKSEFA-WTAIISALARHGDYE 440
+ E++ + + K W ++S HGD E
Sbjct: 465 RLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIE 499
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 195/374 (52%), Gaps = 21/374 (5%)
Query: 161 SFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRM 220
+ S C + + G Q+H +K G G ++ N L+ Y KC A KVF M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 221 HDRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGR 275
+RNV+SW+ ++S + + ++SLF EM G+ PN+ TF + A + N +++G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 276 MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG 335
IHG C+K F V N L+ MY++ + ++EKVF + R +ISWNA+I+G+ G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 336 LSLAAVQAFFGVIKES----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGL--D 389
A+ FG+++E+ +P+ +T S+L A + I G++ H +++ G
Sbjct: 188 YGSKALDT-FGMMQEANIKERPDEFTLTSLLKACSSTGMIYA--GKQIHGFLVRSGFHCP 244
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM 449
S + +L+D+Y K G +F +++ F++ +EK+ +W+++I A+ G++ M FK +
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Query: 450 ENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCM---VDMLGR 506
+ + DS S++ V ++ +G+ + +K PS S + VDM +
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK----LPSGLETSVLNSVVDMYLK 360
Query: 507 VGRLEEAEELVGQI 520
G ++EAE+ ++
Sbjct: 361 CGLVDEAEKCFAEM 374
>sp|Q9M2Y4|PP276_ARATH Pentatricopeptide repeat-containing protein At3g49740
OS=Arabidopsis thaliana GN=PCMP-E84 PE=2 SV=1
Length = 737
Score = 332 bits (850), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 200/614 (32%), Positives = 348/614 (56%), Gaps = 34/614 (5%)
Query: 6 KSGQFDKALCIFNNL-NNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDAVTYS 61
K G + A +F+ + D+ WN +++G ++S + ++ M+ +GV D ++
Sbjct: 135 KLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFA 194
Query: 62 TALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE--MP 119
T LS C D+ FG Q+HSL++K G V NALITMY +V+A VF+E +
Sbjct: 195 TILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVA 253
Query: 120 NKDSVSWNAI---LSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+D V++N + L+G+ +D E++L +M+ LR ++F S +C
Sbjct: 254 VRDQVTFNVVIDGLAGFKRD-----ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA--- 305
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR 236
+G Q+HG++IK GY + V N M+ YS E G A+KVF + ++++++W TMIS
Sbjct: 306 MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYN 365
Query: 237 E-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPS 291
+ A+S++K M + GV P++ TF G + A S+ V E M+ IK S+
Sbjct: 366 QAKLGKSAMSVYKRMHIIGVKPDEFTF-GSLLATSLDLDVLE--MVQACIIKFGLSSKIE 422
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES 351
+ N LI+ Y++ ++ ++ +F+ + +ISWNA+ISG+ NG ++ F +++
Sbjct: 423 ISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESE 482
Query: 352 K---PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
P+AYT ++L+ + + L G + H+++++ G + ++G+AL++MY + G+I
Sbjct: 483 VRILPDAYTLSTLLSICVSTSSLML--GSQTHAYVLRHGQFKETLIGNALINMYSQCGTI 540
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKG-VRPDSITFLSVLTV 467
S VFN+ EK +W ++ISA +RHG+ E+ +N +K M+++G V PD+ TF +VL+
Sbjct: 541 QNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSA 600
Query: 468 CGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELV--GQIPGGPG 525
C G++ +G +F+SM++ + + + DH+SC+VD+LGR G L+EAE LV + G
Sbjct: 601 CSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSR 660
Query: 526 LSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKG 585
+ V +L AC HG++++G+ +A LM+ E YV +SN+YA G W+ R+
Sbjct: 661 VDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRA 720
Query: 586 MKSKGVRKEVGFSW 599
+ G K+ G SW
Sbjct: 721 INMIGAMKQRGCSW 734
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 160/598 (26%), Positives = 283/598 (47%), Gaps = 65/598 (10%)
Query: 12 KALCIFNNL-----NNPDIVSWNTVLSGFEKSDD---ALS-FALRMNLIGVVFDAVTYST 62
KALC+ +L N+ +++ N L+G +S + AL FA + D + S
Sbjct: 3 KALCLTESLSAIAENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSL 62
Query: 63 ALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR--------- 113
A++ +FG Q+H ++ GL +V N L+++Y R G L ++
Sbjct: 63 AITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPD 122
Query: 114 ----------------------VFDEMPNKDSVS-WNAILSGYTQDGDYGVEAILALIEM 150
VFD+MP +D V+ WNA+++G + G Y ++ EM
Sbjct: 123 VYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESG-YHETSVELFREM 181
Query: 151 MRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVT 210
+ G+R D F + S C + +L+ GKQ+H + IK G+ SV N L++ Y C+V
Sbjct: 182 HKLGVRHDKFGFATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVV 240
Query: 211 GDANKVFRR--MHDRNVISWTTMIS----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
DA VF + R+ +++ +I R++++ +F++M + P D+TF+ ++ +
Sbjct: 241 VDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGS 300
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
S + G +HGL IKT + V N +TMY+ FE + KVF+ L +++++W
Sbjct: 301 CSCAAM---GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTW 357
Query: 325 NALISGYAQNGLSLAAVQAFFGV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
N +IS Y Q L +A+ + + I KP+ +TFGS+L A + L + + I
Sbjct: 358 NTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL-----ATSLDLDVLEMVQACI 412
Query: 384 IKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVM 443
IK GL S + +AL+ Y K G I ++ +F + K+ +W AIIS +G +
Sbjct: 413 IKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGL 472
Query: 444 NQFKEMENKGVR--PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMV 501
+F + VR PD+ T ++L++C + G +L+ + + + ++
Sbjct: 473 ERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIG-NALI 531
Query: 502 DMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
+M + G ++ + E+ Q+ +S SL+ A HG GE + M+ G
Sbjct: 532 NMYSQCGTIQNSLEVFNQMSEKDVVS-WNSLISAYSRHGE---GENAVNTYKTMQDEG 585
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 196/379 (51%), Gaps = 33/379 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
M MY F A +F +L D+V+WNT++S + ++ A+S RM++IGV D
Sbjct: 330 MTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDE 389
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ + L+ LD + + + I+KFGL S++ + NALI+ YS+ G++ +A +F+
Sbjct: 390 FTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFER 446
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRL--DHVSFTSAASACGHEKNL 175
K+ +SWNAI+SG+ +G + E + ++ +R+ D + ++ S C +L
Sbjct: 447 SLRKNLISWNAIISGFYHNG-FPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSL 505
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
LG Q H ++ G +GN L++ YS+C ++ +VF +M +++V+SW ++IS
Sbjct: 506 MLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAY 565
Query: 236 R-----EDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMI-------HGLCI 282
E+AV+ +K M+ +G V P+ TF ++ A S LV+EG I HG+
Sbjct: 566 SRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIR 625
Query: 283 KTNFLSEPSVCNCLITMYARFESMQDSE---KVFDELSCREIISWNALISGYAQNG-LSL 338
+ S CL+ + R + ++E K+ ++ + W AL S A +G L L
Sbjct: 626 NVDHFS------CLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKL 679
Query: 339 AAVQAFFGVIKES-KPNAY 356
+ A + KE P+ Y
Sbjct: 680 GKMVAKLLMEKEKDDPSVY 698
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 331 bits (849), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 222/654 (33%), Positives = 336/654 (51%), Gaps = 25/654 (3%)
Query: 1 MNMYCKSGQFDK-ALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVT 59
+N Y K+G FDK AL +F+ + + VS+ T+ G+ D + R++ G +
Sbjct: 91 LNAYVKAG-FDKDALNLFDEMPERNNVSFVTLAQGY-ACQDPIGLYSRLHREGHELNPHV 148
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
+++ L + + LHS IVK G DS +VG ALI YS G + AR VF+ +
Sbjct: 149 FTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGIL 208
Query: 120 NKDSVSWNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAASACGHEKNLELG 178
KD V W I+S Y ++G + E L L+ MR G ++ +F +A A +
Sbjct: 209 CKDIVVWAGIVSCYVENGYF--EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFA 266
Query: 179 KQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE- 237
K +HG +K Y VG L+ Y++ DA KVF M +V+ W+ MI+ +
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326
Query: 238 ----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
+AV LF MR V PN+ T +++ +IG G +HGL +K F + V
Sbjct: 327 GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS 386
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-ESK 352
N LI +YA+ E M + K+F ELS + +SWN +I GY G A F ++ +
Sbjct: 387 NALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVS 446
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
TF S L A + + L G + H IK V ++L+DMY K G I +Q
Sbjct: 447 VTEVTFSSALGACASLASMDL--GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQ 504
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
VFNE + +W A+IS + HG + M+++ +P+ +TFL VL+ C G
Sbjct: 505 SVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAG 564
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
+I +G+ F+SM++D+ IEP +HY+CMV +LGR G+L++A +L+ IP P + + +++
Sbjct: 565 LIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAM 624
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
L A N E R A+ ++K+ P +YVL+SN+YA W VA +RK MK GV+
Sbjct: 625 LSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVK 684
Query: 593 KEVGFSWAD-VGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERA 645
KE G SW + GD+ H FS G + HP + I M E +LN K RA
Sbjct: 685 KEPGLSWIEHQGDV---HYFSVGLSDHPDMKLINGMLE-------WLNMKATRA 728
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 234/506 (46%), Gaps = 19/506 (3%)
Query: 55 FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRV 114
D+ Y L C+ + +H I+K G +++ N L+ Y + G +A +
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 115 FDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKN 174
FDEMP +++VS+ + GY G+ + + R+G L+ FTS
Sbjct: 107 FDEMPERNNVSFVTLAQGYACQDPIGLYS-----RLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM 234
E+ +H +K+GY ++ VG L++ YS C A VF + ++++ W ++S
Sbjct: 162 AEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC 221
Query: 235 NR-----EDAVSLFKEMRLDGVCPNDVTF-IGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
ED++ L MR+ G PN+ TF L +I +G + +HG +KT ++
Sbjct: 222 YVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF-DFAKGVHGQILKTCYVL 280
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+P V L+ +Y + M D+ KVF+E+ +++ W+ +I+ + QNG AV F +
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIR-M 339
Query: 349 KES--KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+E+ PN +T S+LN + L G++ H ++KVG D D V +AL+D+Y K
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDIYVSNALIDVYAKCE 397
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ + ++F E K+E +W +I G+ + F+E V +TF S L
Sbjct: 398 KMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALG 457
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGL 526
C + G + +K + + S ++DM + G ++ A+ + ++ +
Sbjct: 458 ACASLASMDLGVQVHGLAIKTNNAKKVAVSNS-LIDMYAKCGDIKFAQSVFNEME-TIDV 515
Query: 527 SVLQSLLGACRIHGNVEMGERIADAL 552
+ +L+ HG RI D +
Sbjct: 516 ASWNALISGYSTHGLGRQALRILDIM 541
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 304/577 (52%), Gaps = 42/577 (7%)
Query: 96 NALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK-G 154
N L+ YS+ G + E F+++P++D V+WN ++ GY+ G G A+ A MMR
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGA-AVKAYNTMMRDFS 134
Query: 155 LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDAN 214
L V+ + ++ LGKQIHG IK+G+ +++ VG+ L+ Y+ DA
Sbjct: 135 ANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK 194
Query: 215 KVFRRMHDRNVI------------------------------SWTTMI---SMN--REDA 239
KVF + DRN + SW MI + N ++A
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA 254
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
+ F+EM++ G+ + F ++ A + EG+ IH I+TNF V + LI M
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 300 YARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTF 358
Y + + + ++ VFD + + ++SW A++ GY Q G + AV+ F + + P+ YT
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 359 GSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNET 418
G ++A A SL+ G + H I GL V ++L+ +YGK G I +S R+FNE
Sbjct: 375 GQAISA--CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Query: 419 QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGR 478
+ +WTA++SA A+ G + F +M G++PD +T V++ C R G++ KG+
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 479 HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRI 538
F M +Y I PS HYSCM+D+ R GRLEEA + +P P +LL ACR
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 539 HGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFS 598
GN+E+G+ A++L++++P Y L+S++YA KG W+ VA LR+GM+ K V+KE G S
Sbjct: 553 KGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQS 612
Query: 599 WADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
W + LH FS+ D + P ++IY E L +++
Sbjct: 613 W--IKWKGKLHSFSADDESSPYLDQIYAKLEELNNKI 647
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 230/480 (47%), Gaps = 47/480 (9%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDA----VT 59
Y K+G + F L + D V+WN ++ G+ S + N + F A VT
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMP 119
T L + G Q+H ++K G +S + VG+ L+ MY+ G + +A++VF +
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 120 N------------------------------KDSVSWNAILSGYTQDGDYGVEAILALIE 149
+ KDSVSW A++ G Q+G EAI E
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG-LAKEAIECFRE 260
Query: 150 MMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEV 209
M +GL++D F S ACG + GKQIH I+ + H+ VG+ L+ Y KC+
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 210 TGDANKVFRRMHDRNVISWTTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHA 264
A VF RM +NV+SWT M+ + E+AV +F +M+ G+ P+ T I A
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 265 ISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISW 324
+ + ++EG HG I + + +V N L+T+Y + + DS ++F+E++ R+ +SW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 325 NALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHI 383
A++S YAQ G ++ +Q F +++ KP+ T V++A A + + GQR + +
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV--EKGQR-YFKL 497
Query: 384 IKVGLDSDPIVG--SALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYE 440
+ P +G S ++D++ + G + E+ R N WT ++SA G+ E
Sbjct: 498 MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 124/242 (51%), Gaps = 8/242 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++MYCK A +F+ + ++VSW ++ G+ ++++A+ L M G+ D
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T A+S C + G Q H + GL V V N+L+T+Y + G + ++ R+F+E
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M +D+VSW A++S Y Q G VE I +M++ GL+ D V+ T SAC +E
Sbjct: 432 MNVRDAVSWTAMVSAYAQFGR-AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 178 GKQIHGVSIKMGYGTHVSVGN--VLMSTYSKCEVTGDANKVFRRM-HDRNVISWTTMISM 234
G++ + + YG S+G+ ++ +S+ +A + M + I WTT++S
Sbjct: 491 GQRYFKL-MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 235 NR 236
R
Sbjct: 550 CR 551
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 162/401 (40%), Gaps = 105/401 (26%)
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNA-------- 326
+MIHG I+ E + N ++ YA +S + +VFD + + SWN
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 327 -----------------------LISGYAQNGLSLAAVQAFFGVIKESKPN--AYTFGSV 361
LI GY+ +GL AAV+A+ ++++ N T ++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 362 LNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN----- 416
L + +SL G++ H +IK+G +S +VGS LL MY G I ++++VF
Sbjct: 146 LKLSSSNGHVSL--GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 417 -------------------------ETQEKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
EK +W A+I LA++G + + F+EM+
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGR-------------HLF-DSMLKDYHIEPSPDHY 497
+G++ D F SVL CG G I++G+ H++ S L D + + HY
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 498 ----------------SCMVDMLGRVGRLEEAEELVGQIPGG---PGLSVLQSLLGACRI 538
+ MV G+ GR EEA ++ + P L + AC
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 539 HGNVEMGERIADALMKMEPAGSGSYVLMSN----LYAEKGD 575
++E G + K +G YV +SN LY + GD
Sbjct: 384 VSSLEEGSQFHG---KAITSGLIHYVTVSNSLVTLYGKCGD 421
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 331 bits (848), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 198/585 (33%), Positives = 316/585 (54%), Gaps = 18/585 (3%)
Query: 75 FGLQLHSLIVKFGLDSEV--YVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
G +H+ IVK LDS ++ N LI MYS+ AR V P ++ VSW +++SG
Sbjct: 24 LGRVVHARIVK-TLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 133 YTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGT 192
Q+G + A++ EM R+G+ + +F A A + GKQIH +++K G
Sbjct: 83 LAQNGHFST-ALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL 141
Query: 193 HVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRED-----AVSLFKEMR 247
V VG Y K + DA K+F + +RN+ +W IS + D A+ F E R
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 248 -LDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESM 306
+DG PN +TF ++A S + G +HGL +++ F ++ SVCN LI Y + + +
Sbjct: 202 RIDGH-PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260
Query: 307 QDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAV 365
+ SE +F E+ + +SW +L++ Y QN A + K+ + + + SVL+A
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 320
Query: 366 GAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFA 425
+ L G+ H+H +K ++ VGSAL+DMYGK G I +S++ F+E EK+
Sbjct: 321 AGMAGLEL--GRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 378
Query: 426 WTAIISALARHGDYESVMNQFKEMENKGV--RPDSITFLSVLTVCGRNGMIHKGRHLFDS 483
++I A G + + F+EM +G P+ +TF+S+L+ C R G + G +FDS
Sbjct: 379 RNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS 438
Query: 484 MLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVE 543
M Y IEP +HYSC+VDMLGR G +E A E + ++P P +SV +L ACR+HG +
Sbjct: 439 MRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ 498
Query: 544 MGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVG 603
+G A+ L K++P SG++VL+SN +A G W +R+ +K G++K G+SW V
Sbjct: 499 LGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVK 558
Query: 604 DIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMKYLNSKRERAIAL 648
+ +H F + D +H ++EI L +EM+ K + ++L
Sbjct: 559 --NQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSL 601
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 218/450 (48%), Gaps = 16/450 (3%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
+NMY K + A + ++VSW +++SG ++ AL M GVV +
Sbjct: 49 INMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPND 108
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
T+ A + G Q+H+L VK G +V+VG + MY + +AR++FDE
Sbjct: 109 FTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDE 168
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
+P ++ +WNA +S DG EAI A IE R + ++F + +AC +L L
Sbjct: 169 IPERNLETWNAFISNSVTDGR-PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNL 227
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---M 234
G Q+HG+ ++ G+ T VSV N L+ Y KC+ + +F M +N +SW ++++
Sbjct: 228 GMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ 287
Query: 235 NRED--AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
N ED A L+ R D V +D ++ A + ++ GR IH +K V
Sbjct: 288 NHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFV 347
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNG---LSLAAVQAFFGVIK 349
+ L+ MY + ++DSE+ FDE+ + +++ N+LI GYA G ++LA +
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 407
Query: 350 ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSI 408
PN TF S+L+A A ++++G + + G++ S ++DM G+ G +
Sbjct: 408 GPTPNYMTFVSLLSACSRAG--AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMV 465
Query: 409 FESQRVFNETQEKSEFA-WTAIISALARHG 437
+ + + + W A+ +A HG
Sbjct: 466 ERAYEFIKKMPIQPTISVWGALQNACRMHG 495
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 182/382 (47%), Gaps = 18/382 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
+MYCK+ D A +F+ + ++ +WN +S + +A+ + I ++
Sbjct: 150 FDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNS 209
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+T+ L+ C D G+QLH L+++ G D++V V N LI Y + ++ + +F E
Sbjct: 210 ITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTE 269
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M K++VSW ++++ Y Q+ + ++L L + + +S SAC LEL
Sbjct: 270 MGTKNAVSWCSLVAAYVQNHEDEKASVLYL-RSRKDIVETSDFMISSVLSACAGMAGLEL 328
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+ IH ++K + VG+ L+ Y KC D+ + F M ++N+++ ++I
Sbjct: 329 GRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAH 388
Query: 233 SMNREDAVSLFKEM--RLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEP 290
+ A++LF+EM R G PN +TF+ L+ A S V+ G I +++ + EP
Sbjct: 389 QGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEP 447
Query: 291 SV--CNCLITMYARFESMQDSEKVFDELSCREIIS-WNALISGYAQNG---LSLAAVQAF 344
+C++ M R ++ + + ++ + IS W AL + +G L L A +
Sbjct: 448 GAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENL 507
Query: 345 FGVIKESKPNAYTFGSVLNAVG 366
F + + N + A G
Sbjct: 508 FKLDPKDSGNHVLLSNTFAAAG 529
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 216/664 (32%), Positives = 365/664 (54%), Gaps = 39/664 (5%)
Query: 1 MNMY--CKSG----QFDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNL 50
MNMY C + ++D +F+N+ ++V+WNT++S + K+ + F + M +
Sbjct: 149 MNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM 208
Query: 51 ----IGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLD--SEVYVGNALITMYSR 104
V F V + ++S + +GL L K G + +++V ++ I+MY+
Sbjct: 209 EVKPSPVSFVNVFPAVSISRSIKKANVFYGLML-----KLGDEYVKDLFVVSSAISMYAE 263
Query: 105 WGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFT 163
G + +RRVFD ++ WN ++ Y Q+ D VE+I +E + K + D V++
Sbjct: 264 LGDIESSRRVFDSCVERNIEVWNTMIGVYVQN-DCLVESIELFLEAIGSKEIVSDEVTYL 322
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
AASA + +ELG+Q HG K + + N LM YS+C + VF M +R
Sbjct: 323 LAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRER 382
Query: 224 NVISWTTMISMNREDAVS-----LFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIH 278
+V+SW TMIS ++ + L EM+ G + +T L+ A S + G+ H
Sbjct: 383 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTH 442
Query: 279 GLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDE--LSCREIISWNALISGYAQNGL 336
I+ E + + LI MY++ ++ S+K+F+ + R+ +WN++ISGY QNG
Sbjct: 443 AFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGH 501
Query: 337 SLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
+ F +++++ +PNA T S+L A + L G++ H I+ LD + V
Sbjct: 502 TEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDL--GKQLHGFSIRQYLDQNVFVA 559
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
SAL+DMY K G+I ++ +F++T+E++ +T +I +HG E ++ F M+ G++
Sbjct: 560 SALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIK 619
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
PD+ITF++VL+ C +G+I +G +F+ M + Y+I+PS +HY C+ DMLGRVGR+ EA E
Sbjct: 620 PDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYE 679
Query: 516 LV-GQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG--SGSYVLMSNLYAE 572
V G G + SLLG+C++HG +E+ E +++ L K + SG VL+SN+YAE
Sbjct: 680 FVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAE 739
Query: 573 KGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLG 632
+ W+ V +R+GM+ KG++KEVG S ++ ++ F S D HP S EIY + + L
Sbjct: 740 EQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGY--VNCFVSRDQEHPHSSEIYDVIDGLA 797
Query: 633 SEMK 636
+M+
Sbjct: 798 KDMR 801
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 158/578 (27%), Positives = 280/578 (48%), Gaps = 33/578 (5%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVF--DAVT 59
C+ G A +F+ + P V WNT++ GF +AL F RM DA T
Sbjct: 50 CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYT 109
Query: 60 YSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVE------ARR 113
YS+ L C + + G +H +++ +S V N+L+ MY + R+
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VFD M K+ V+WN ++S Y + G EA MMR ++ VSF + A +
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGR-NAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 174 NLELGKQIHGVSIKMG--YGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTM 231
+++ +G+ +K+G Y + V + +S Y++ + +VF +RN+ W TM
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 232 ISMNRE-----DAVSLFKE-MRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
I + + +++ LF E + + ++VT++ A+S V+ GR HG + N
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGF-VSKN 347
Query: 286 FLSEPSV-CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
F P V N L+ MY+R S+ S VF + R+++SWN +IS + QNGL +
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKH-GQRCHSHIIKVGLDSDPIVGSALLDMYG 403
+ + K+ Y +V + AA ++ K G++ H+ +I+ G+ + + S L+DMY
Sbjct: 408 YEMQKQGFKIDYI--TVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYS 464
Query: 404 KRGSIFESQRVFNET--QEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITF 461
K G I SQ++F + E+ + W ++IS ++G E F++M + +RP+++T
Sbjct: 465 KSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTV 524
Query: 462 LSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIP 521
S+L C + G + G+ L ++ Y ++ + S +VDM + G ++ AE++ Q
Sbjct: 525 ASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 522 GGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAG 559
++ +LG +G MGER + M+ +G
Sbjct: 584 ERNSVTYTTMILG----YGQHGMGERAISLFLSMQESG 617
>sp|Q9MA85|PP215_ARATH Pentatricopeptide repeat-containing protein At3g05340
OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2
Length = 658
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/590 (33%), Positives = 324/590 (54%), Gaps = 25/590 (4%)
Query: 54 VFDAVTYSTALSFCLDHEGFL--FGLQLHSLIVKFG-----LDSEVY-----VGNALITM 101
+ + V S LS C EG+ G LH+ I+K +D++++ V N+L+++
Sbjct: 41 LLNHVDMSLLLSIC-GREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSL 99
Query: 102 YSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVS 161
Y++ G+LV+A ++FDEMP +D +S N + G+ ++ + E+ L++ M DH +
Sbjct: 100 YAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRE--TESGFVLLKRMLGSGGFDHAT 157
Query: 162 FTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMH 221
T S C + + K IH ++I GY +SVGN L+++Y KC + VF M
Sbjct: 158 LTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMS 217
Query: 222 DRNVISWTTMIS-----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM 276
RNVI+ T +IS ED + LF MR V PN VT++ + A S + EG+
Sbjct: 218 HRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQ 277
Query: 277 IHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGL 336
IH L K SE + + L+ MY++ S++D+ +F+ + + +S ++ G AQNG
Sbjct: 278 IHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGS 337
Query: 337 SLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG 395
A+Q F +++ + +A +VL + D SL G++ HS +IK + V
Sbjct: 338 EEEAIQFFIRMLQAGVEIDANVVSAVLGV--SFIDNSLGLGKQLHSLVIKRKFSGNTFVN 395
Query: 396 SALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVR 455
+ L++MY K G + +SQ VF +++ +W ++I+A ARHG + + ++EM V+
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 456 PDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
P +TFLS+L C G+I KGR L + M + + IEP +HY+C++DMLGR G L+EA+
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKS 515
Query: 516 LVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGD 575
+ +P P + Q+LLGAC HG+ E+GE A+ L + P S +++L++N+Y+ +G
Sbjct: 516 FIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGK 575
Query: 576 WEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIY 625
W+ A K MK+ GV KE G S ++ H F D HP++E IY
Sbjct: 576 WKERAKTIKRMKAMGVTKETGISSIEIE--HKTHSFVVEDKLHPQAEAIY 623
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 239/470 (50%), Gaps = 19/470 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS-FALRMNLIGVV-FDAV 58
+++Y K G+ A+ +F+ + D++S N V GF ++ + S F L ++G FD
Sbjct: 97 LSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHA 156
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T + LS C E L +H+L + G D E+ VGN LIT Y + G V R VFD M
Sbjct: 157 TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGM 216
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGL-RLDHVSFTSAASACGHEKNLEL 177
+++ ++ A++SG ++ + E L L +MR+GL + V++ SA +AC + +
Sbjct: 217 SHRNVITLTAVISGLIENELH--EDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVE 274
Query: 178 GKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI----- 232
G+QIH + K G + + + + LM YSKC DA +F + + +S T ++
Sbjct: 275 GQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQ 334
Query: 233 SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-IGNLVKEGRMIHGLCIKTNFLSEPS 291
+ + E+A+ F M GV D + + +S I N + G+ +H L IK F
Sbjct: 335 NGSEEEAIQFFIRMLQAGV-EIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 292 VCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK-E 350
V N LI MY++ + DS+ VF + R +SWN++I+ +A++G LAA++ + + E
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKV-GLDSDPIVGSALLDMYGKRGSIF 409
KP TF S+L+A I G+ + + +V G++ + ++DM G+ G +
Sbjct: 454 VKPTDVTFLSLLHACSHVGLID--KGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLK 511
Query: 410 ESQRVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
E++ + K + W A++ A + HGD E + ++ + PDS
Sbjct: 512 EAKSFIDSLPLKPDCKIWQALLGACSFHGDTE--VGEYAAEQLFQTAPDS 559
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 329 bits (844), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 317/582 (54%), Gaps = 21/582 (3%)
Query: 56 DAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
D VT+ L+ + + G Q+H + +K GLD + V N+LI MY + + AR VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH-EKN 174
D M +D +SWN++++G Q+G VEA+ ++++R GL+ D + TS A +
Sbjct: 374 DNMSERDLISWNSVIAGIAQNG-LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEG 432
Query: 175 LELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-- 232
L L KQ+H +IK+ + V L+ YS+ +A +F R H+ ++++W M+
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAG 491
Query: 233 ---SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
S + + LF M G +D T + + +G+ +H IK+ + +
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF----- 344
V + ++ MY + M ++ FD + + ++W +ISG +NG A F
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611
Query: 345 FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
GV+ P+ +T ++ A +L+ G++ H++ +K+ +DP VG++L+DMY K
Sbjct: 612 MGVL----PDEFTIATLAKASSCL--TALEQGRQIHANALKLNCTNDPFVGTSLVDMYAK 665
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GSI ++ +F + + AW A++ LA+HG+ + + FK+M++ G++PD +TF+ V
Sbjct: 666 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGV 725
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGP 524
L+ C +G++ + SM DY I+P +HYSC+ D LGR G +++AE L+ +
Sbjct: 726 LSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEA 785
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
S+ ++LL ACR+ G+ E G+R+A L+++EP S +YVL+SN+YA W+ + + R
Sbjct: 786 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 845
Query: 585 GMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
MK V+K+ GFSW +V + +H F D ++ ++E IYR
Sbjct: 846 MMKGHKVKKDPGFSWIEVK--NKIHIFVVDDRSNRQTELIYR 885
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 155/561 (27%), Positives = 262/561 (46%), Gaps = 58/561 (10%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDAL------SFAL-RMNLIGV 53
++MY K G A +F+ + + D+VSWN++L+ + +S + + +F L R+ V
Sbjct: 81 ISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDV 140
Query: 54 VFDA-VTYSTALSFCLDHEGFLFGLQ-LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
V+ + +T S L CL H G+++ + H K GLD + +V AL+ +Y ++G++ E
Sbjct: 141 VYTSRMTLSPMLKLCL-HSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEG 199
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACG- 170
+ +F+EMP +D V WN +L Y +EM G + + + +SA + G
Sbjct: 200 KVLFEEMPYRDVVLWNLMLKAY--------------LEM---GFKEEAIDLSSAFHSSGL 242
Query: 171 --HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
+E L L +I G G + GN DA+ V + +S
Sbjct: 243 NPNEITLRLLARISGDDSDAGQVKSFANGN-------------DASSVSEIIFRNKGLS- 288
Query: 229 TTMISMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
+ S + F +M V + VTFI ++ + + G+ +H + +K
Sbjct: 289 EYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL 348
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+V N LI MY + + VFD +S R++ISWN++I+G AQNGL + AV F ++
Sbjct: 349 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL 408
Query: 349 KES-KPNAYTFGSVLNAVGA-AEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
+ KP+ YT SVL A + E +SL ++ H H IK+ SD V +AL+D Y +
Sbjct: 409 RCGLKPDQYTMTSVLKAASSLPEGLSL--SKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
+ E++ +F E AW A+++ + D + F M +G R D T +V
Sbjct: 467 CMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 467 VCGRNGMIHKGRHLFDSMLKD-YHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPG 525
CG I++G+ + +K Y ++ S ++DM + G + A+ IP
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIP---- 579
Query: 526 LSVLQSLLGACRIHGNVEMGE 546
V + I G +E GE
Sbjct: 580 --VPDDVAWTTMISGCIENGE 598
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 184/402 (45%), Gaps = 42/402 (10%)
Query: 73 FLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSG 132
+ G H+ I+ F + E ++ N LI+MYS+ G L ARRVFD+MP++D VSWN+IL+
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 133 YTQDGDYGVEAI---LALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKM 188
Y Q + VE I L ++R+ + ++ + C H + + HG + K+
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 189 GYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN-----REDAVSLF 243
G V L++ Y K + +F M R+V+ W M+ +E+A+ L
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 244 KEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARF 303
G+ PN++T + L+ IS G+ G++ F
Sbjct: 235 SAFHSSGLNPNEIT-LRLLARIS-GDDSDAGQV------------------------KSF 268
Query: 304 ESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLN 363
+ D+ V EII N +S Y +G A ++ F ++ ES +L
Sbjct: 269 ANGNDASSV------SEIIFRNKGLSEYLHSGQYSALLKCFADMV-ESDVECDQVTFILM 321
Query: 364 AVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSE 423
A + SL GQ+ H +K+GLD V ++L++MY K ++ VF+ E+
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDL 381
Query: 424 FAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVL 465
+W ++I+ +A++G + F ++ G++PD T SVL
Sbjct: 382 ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVL 423
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 269 NLVKEGRMIHGLCIKTNFLS-----EPSVCNCLITMYARFESMQDSEKVFDELSCREIIS 323
N + ++ G C L+ E + N LI+MY++ S+ + +VFD++ R+++S
Sbjct: 48 NAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVS 107
Query: 324 WNALISGYAQNGLSLAA--VQAF--FGVIKES--KPNAYTFGSVLNA------VGAAEDI 371
WN++++ YAQ+ + QAF F ++++ + T +L V A+E
Sbjct: 108 WNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF 167
Query: 372 SLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIIS 431
HG C K+GLD D V AL+++Y K G + E + +F E + W ++
Sbjct: 168 ---HGYAC-----KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 432 ALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCG 469
A G E ++ + G+ P+ IT + + G
Sbjct: 220 AYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISG 257
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G D A C+F + +I +WN +L G + + L +M +G+ D
Sbjct: 660 VDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDK 719
Query: 58 VTYSTALSFCLDHEGFLFGLQLH--SLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT+ LS C H G + H S+ +G+ E+ + L R G + +A +
Sbjct: 720 VTFIGVLSAC-SHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLI 778
Query: 116 DEMPNKDSVS-WNAILSGYTQDGD 138
+ M + S S + +L+ GD
Sbjct: 779 ESMSMEASASMYRTLLAACRVQGD 802
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 329 bits (843), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 206/607 (33%), Positives = 329/607 (54%), Gaps = 46/607 (7%)
Query: 5 CKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTAL 64
CK GQ +A+ I N+ ++ +I + + Y++ L
Sbjct: 37 CKLGQLTEAIRILNSTHSSEIPATPKL----------------------------YASLL 68
Query: 65 SFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGR-LVEARRVFDEMPNKDS 123
C F+ G+Q H+ +VK GL+++ VGN+L+++Y + G + E RRVFD KD+
Sbjct: 69 QTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDA 128
Query: 124 VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHG 183
+SW +++SGY ++ V+A+ +EM+ GL + + +SA AC + LG+ HG
Sbjct: 129 ISWTSMMSGYVTGKEH-VKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHG 187
Query: 184 VSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNR-----ED 238
V I G+ + + + L Y DA +VF M + +VI WT ++S E+
Sbjct: 188 VVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEE 247
Query: 239 AVSLFKEM-RLDGVCPNDVTFIGLIHAISIGNL--VKEGRMIHGLCIKTNFLSEPSVCNC 295
A+ LF M R G+ P+ TF ++ A GNL +K+G+ IHG I S V +
Sbjct: 248 ALGLFYAMHRGKGLVPDGSTFGTVLTAC--GNLRRLKQGKEIHGKLITNGIGSNVVVESS 305
Query: 296 LITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNA 355
L+ MY + S++++ +VF+ +S + +SW+AL+ GY QNG A++ F + + +
Sbjct: 306 LLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFR---EMEEKDL 362
Query: 356 YTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVF 415
Y FG+VL A + L G+ H ++ G + IV SAL+D+YGK G I + RV+
Sbjct: 363 YCFGTVLKACAGLAAVRL--GKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY 420
Query: 416 NETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIH 475
++ ++ W A++SALA++G E ++ F +M KG++PD I+F+++LT CG GM+
Sbjct: 421 SKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD 480
Query: 476 KGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGA 535
+GR+ F M K Y I+P +HYSCM+D+LGR G EEAE L+ + S+ LLG
Sbjct: 481 EGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGP 540
Query: 536 CRIHGNV-EMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKE 594
C + + + ERIA +M++EP SYVL+SN+Y G +RK M +GV K
Sbjct: 541 CAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKT 600
Query: 595 VGFSWAD 601
VG SW D
Sbjct: 601 VGQSWID 607
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++MY K G +A +FN ++ + VSW+ +L G+ ++ + A+ M D
Sbjct: 307 LDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDL 362
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
+ T L C G ++H V+ G V V +ALI +Y + G + A RV+ +
Sbjct: 363 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSK 422
Query: 118 MPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLEL 177
M ++ ++WNA+LS Q+G G EA+ +M++KG++ D++SF + +ACGH ++
Sbjct: 423 MSIRNMITWNAMLSALAQNGR-GEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDE 481
Query: 178 GKQ 180
G+
Sbjct: 482 GRN 484
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 196/625 (31%), Positives = 333/625 (53%), Gaps = 33/625 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALS---FALRMNLI------ 51
++ Y G AL +F+ + ++VSWN+++ F SD+ S F L ++
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF--SDNGFSEESFLLLGEMMEENGDG 286
Query: 52 GVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEA 111
+ D T T L C G +H VK LD E+ + NAL+ MYS+ G + A
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 112 RRVFDEMPNKDSVSWNAILSGYTQDGD-YGVEAILALIEMMRKGLRLDHVSFTSAASACG 170
+ +F NK+ VSWN ++ G++ +GD +G +L + + ++ D V+ +A C
Sbjct: 347 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406
Query: 171 HEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTT 230
HE L K++H S+K + + V N +++Y+KC A +VF + + V SW
Sbjct: 407 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 466
Query: 231 MI---SMNREDAVSL--FKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+I + + + +SL +M++ G+ P+ T L+ A S ++ G+ +HG I+
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+ V ++++Y + + +FD + + ++SWN +I+GY QNG A+ F
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 346 GVIKESKPNAYTFG------SVLNAVGAAEDI-SLKHGQRCHSHIIKVGLDSDPIVGSAL 398
++ +G S++ GA + SL+ G+ H++ +K L+ D + +L
Sbjct: 587 QMV--------LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSL 638
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+DMY K GSI +S +VFN +EKS +W A+I HG + + F+EM+ G PD
Sbjct: 639 IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 698
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
+TFL VLT C +G+IH+G D M + ++P+ HY+C++DMLGR G+L++A +V
Sbjct: 699 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 758
Query: 519 -QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWE 577
++ + + +SLL +CRIH N+EMGE++A L ++EP +YVL+SNLYA G WE
Sbjct: 759 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWE 818
Query: 578 MVAILRKGMKSKGVRKEVGFSWADV 602
V +R+ M +RK+ G SW ++
Sbjct: 819 DVRKVRQRMNEMSLRKDAGCSWIEL 843
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 265/533 (49%), Gaps = 22/533 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDAL-SFALRMNLIGVVFD 56
+ MY G D + +F+ L + ++ WN V+S + ++ D+ L +F ++ ++ D
Sbjct: 127 ITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPD 186
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
TY + C GL +H L+VK GL +V+VGNAL++ Y G + +A ++FD
Sbjct: 187 HFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFD 246
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRK----GLRLDHVSFTSAASACGHE 172
MP ++ VSWN+++ ++ +G + E+ L L EMM + D + + C E
Sbjct: 247 IMPERNLVSWNSMIRVFSDNG-FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 173 KNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI 232
+ + LGK +HG ++K+ + + N LM YSKC +A +F+ +++NV+SW TM+
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 233 -----SMNREDAVSLFKEMRLDG--VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTN 285
+ + ++M G V ++VT + + + + + +H +K
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425
Query: 286 FLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
F+ V N + YA+ S+ +++VF + + + SWNALI G+AQ+ ++ A
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 346 GV-IKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
+ I P+++T S+L+A + SL+ G+ H II+ L+ D V ++L +Y
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLK--SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
G + Q +F+ ++KS +W +I+ ++G + + F++M G++ I+ + V
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 465 LTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC-MVDMLGRVGRLEEAEEL 516
C + GR LK H+ +C ++DM + G + ++ ++
Sbjct: 604 FGACSLLPSLRLGREAHAYALK--HLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 229/497 (46%), Gaps = 35/497 (7%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTA 63
+C++G DK+ D E S DA F L +G++ A
Sbjct: 53 FCETGDLDKSFRTVQEFVGDD-----------ESSSDA--FLLVREALGLLLQASGKRKD 99
Query: 64 LSFCLDHEGFLFGLQLHSLIV-KFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKD 122
+ G ++H L+ L ++ + +ITMY+ G ++R VFD + +K+
Sbjct: 100 IEM---------GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN 150
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMM-RKGLRLDHVSFTSAASACGHEKNLELGKQI 181
WNA++S Y+++ Y E + IEM+ L DH ++ AC ++ +G +
Sbjct: 151 LFQWNAVISSYSRNELYD-EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 182 HGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNREDAVS 241
HG+ +K G V VGN L+S Y DA ++F M +RN++SW +MI + ++ S
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 242 -----LFKEMRLD----GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
L EM + P+ T + ++ + + G+ +HG +K E +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKESK 352
N L+ MY++ + +++ +F + + ++SWN ++ G++ G + ++ +
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 353 PNAYTFGSVLNAVGAA-EDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
++LNAV + L + H + +K + +V +A + Y K GS+ +
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
QRVF+ + K+ +W A+I A+ D ++ +M+ G+ PDS T S+L+ C +
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
Query: 472 GMIHKGRHLFDSMLKDY 488
+ G+ + +++++
Sbjct: 510 KSLRLGKEVHGFIIRNW 526
>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein At2g37310
OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 203/645 (31%), Positives = 331/645 (51%), Gaps = 56/645 (8%)
Query: 42 LSFALRMNLIGVV----FDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNA 97
L F ++ L G++ D Y + H L LQLH+ IV F + + ++ +
Sbjct: 3 LGFEIQRALQGLLNKAAVDGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASK 62
Query: 98 LITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMM------ 151
LI+ Y+R R +A VFDE+ +++ S+NA+L YT Y +A + +
Sbjct: 63 LISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMY-FDAFSLFLSWIGSSCYS 121
Query: 152 RKGLRLDHVSFT---SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
R D +S + A S C L +Q+HG I+ G+ + V VGN +++ Y+KC+
Sbjct: 122 SDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCD 181
Query: 209 VTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM-RLDGVCPNDVTFIGLI 262
A KVF M +R+V+SW +MIS + ED ++K M PN VT I +
Sbjct: 182 NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVF 241
Query: 263 HAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREII 322
A + + G +H I+ + + S+CN +I YA+ S+ + +FDE+S ++ +
Sbjct: 242 QACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV 301
Query: 323 S-------------------------------WNALISGYAQNGLSLAAVQAFFGVIK-E 350
+ WNA+ISG QN + +F +I+
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 351 SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFE 410
S+PN T S+L ++ + + LK G+ H+ I+ G D++ V ++++D Y K G +
Sbjct: 362 SRPNTVTLSSLLPSLTYSSN--LKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLG 419
Query: 411 SQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGR 470
+QRVF+ +++S AWTAII+A A HGD +S + F +M+ G +PD +T +VL+
Sbjct: 420 AQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAH 479
Query: 471 NGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQ 530
+G +H+FDSML Y IEP +HY+CMV +L R G+L +A E + ++P P V
Sbjct: 480 SGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWG 539
Query: 531 SLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKG 590
+LL + G++E+ D L +MEP +G+Y +M+NLY + G WE ++R MK G
Sbjct: 540 ALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIG 599
Query: 591 VRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
++K G SW + GL F + D++ RS+E+Y + E L M
Sbjct: 600 LKKIPGTSWIETE--KGLRSFIAKDSSCERSKEMYEIIEGLVESM 642
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 200/437 (45%), Gaps = 51/437 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS----DDALSFALRMNLIGVVFD 56
+ Y K + A +F+ ++ D+VSWN+++SG+ +S D + + +
Sbjct: 174 ITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPN 233
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
VT + C +FGL++H +++ + ++ + NA+I Y++ G L AR +FD
Sbjct: 234 GVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFD 293
Query: 117 EMPNKDSVSWNAILSGYTQDG------------------------------DYGVEAILA 146
EM KDSV++ AI+SGY G ++ E I +
Sbjct: 294 EMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINS 353
Query: 147 LIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
EM+R G R + V+ +S + + NL+ GK+IH +I+ G ++ V ++ Y+K
Sbjct: 354 FREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAK 413
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGL 261
A +VF DR++I+WT +I+ + + A SLF +M+ G P+DVT +
Sbjct: 414 LGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 262 IHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCN--CLITMYARFESMQDSEKVFDELSCR 319
+ A + + I + T + EP V + C++++ +R + D+ + ++
Sbjct: 474 LSAFAHSGDSDMAQHIFD-SMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPID 532
Query: 320 EIIS-WNALISGYAQNG-LSLA--AVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKH 375
I W AL++G + G L +A A F + E+ N ++ G E+
Sbjct: 533 PIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEE----- 587
Query: 376 GQRCHSHIIKVGLDSDP 392
+ + + ++GL P
Sbjct: 588 AEMVRNKMKRIGLKKIP 604
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 353/635 (55%), Gaps = 20/635 (3%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLI----GVVFDAV 58
MY ++G A +F+ + D+V+W+T++S ++ + + ALRM GV DAV
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVK-ALRMFKCMVDDGVEPDAV 203
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
T + + C + +H I + D + + N+L+TMYS+ G L+ + R+F+++
Sbjct: 204 TMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI 263
Query: 119 PNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELG 178
K++VSW A++S Y + G++ +A+ + EM++ G+ + V+ S S+CG + G
Sbjct: 264 AKKNAVSWTAMISSYNR-GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREG 322
Query: 179 KQIHGVSIKMGYG-THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMNRE 237
K +HG +++ + S+ L+ Y++C D V R + DRN+++W ++IS+
Sbjct: 323 KSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAH 382
Query: 238 -----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV 292
A+ LF++M + P+ T I A LV G+ IHG I+T+ +S+ V
Sbjct: 383 RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFV 441
Query: 293 CNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF-FGVIKES 351
N LI MY++ S+ + VF+++ R +++WN+++ G++QNG S+ A+ F +
Sbjct: 442 QNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYL 501
Query: 352 KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFES 411
+ N TF +V+ A + SL+ G+ H +I GL D +AL+DMY K G + +
Sbjct: 502 EMNEVTFLAVIQACSSIG--SLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAA 558
Query: 412 QRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRN 471
+ VF +S +W+++I+A HG S ++ F +M G +P+ + F++VL+ CG +
Sbjct: 559 ETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618
Query: 472 GMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQS 531
G + +G++ F+ ++K + + P+ +H++C +D+L R G L+EA + ++P SV S
Sbjct: 619 GSVEEGKYYFN-LMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 677
Query: 532 LLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGV 591
L+ CRIH +++ + I + L + +G Y L+SN+YAE+G+WE LR MKS +
Sbjct: 678 LVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNL 737
Query: 592 RKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYR 626
+K G+S ++ + F +G+ +++EIYR
Sbjct: 738 KKVPGYSAIEID--QKVFRFGAGEENRIQTDEIYR 770
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 250/476 (52%), Gaps = 29/476 (6%)
Query: 54 VFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARR 113
VF +V + A S E G ++H I+K G+D + + +L+ MY + G L +A +
Sbjct: 102 VFPSVLRACAGS----REHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEK 157
Query: 114 VFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
VFD MP +D V+W+ ++S ++G+ V+A+ M+ G+ D V+ S C
Sbjct: 158 VFDGMPVRDLVAWSTLVSSCLENGEV-VKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI- 232
L + + +HG + + ++ N L++ YSKC + ++F ++ +N +SWT MI
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
Query: 233 SMNR----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLS 288
S NR E A+ F EM G+ PN VT ++ + + L++EG+ +HG ++
Sbjct: 277 SYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL-- 334
Query: 289 EP---SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFF 345
+P S+ L+ +YA + D E V +S R I++WN+LIS YA G+ + A+ F
Sbjct: 335 DPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFR 394
Query: 346 GVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGK 404
++ + KP+A+T S ++A A + L G++ H H+I+ + SD V ++L+DMY K
Sbjct: 395 QMVTQRIKPDAFTLASSISACENAGLVPL--GKQIHGHVIRTDV-SDEFVQNSLIDMYSK 451
Query: 405 RGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSV 464
GS+ + VFN+ + +S W +++ +++G+ ++ F M + + + +TFL+V
Sbjct: 452 SGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAV 511
Query: 465 LTVCGRNGMIHKGR----HLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ C G + KG+ L S LKD + + ++DM + G L AE +
Sbjct: 512 IQACSSIGSLEKGKWVHHKLIISGLKDLFTD------TALIDMYAKCGDLNAAETV 561
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 139/530 (26%), Positives = 257/530 (48%), Gaps = 28/530 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF---EKSDDALSFALRMNLIGVVFDA 57
+ MY K G + IF + + VSW ++S + E S+ AL M G+ +
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEV-YVGNALITMYSRWGRLVEARRVFD 116
VT + LS C G +H V+ LD + AL+ +Y+ G+L + V
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +++ V+WN+++S Y G ++A+ +M+ + ++ D + S+ SAC + +
Sbjct: 364 VVSDRNIVAWNSLISLYAHRG-MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI---- 232
LGKQIHG I+ V N L+ YSK A+ VF ++ R+V++W +M+
Sbjct: 423 LGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 233 -SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAI-SIGNLVKEGRMIHGLCIKTNFLSEP 290
+ N +A+SLF M + N+VTF+ +I A SIG+L K G+ +H I + L +
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEK-GKWVHHKLIISG-LKDL 539
Query: 291 SVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE 350
LI MYA+ + +E VF +S R I+SW+++I+ Y +G +A+ F +++
Sbjct: 540 FTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVES 599
Query: 351 -SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIF 409
+KPN F +VL+A G + S++ G+ + + G+ + + +D+ + G +
Sbjct: 600 GTKPNEVVFMNVLSACGHSG--SVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLK 657
Query: 410 ESQRVFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMEN--KGVRPDSITFLSVLT 466
E+ R E ++ + W ++++ H M+ K ++N + D + ++L+
Sbjct: 658 EAYRTIKEMPFLADASVWGSLVNGCRIHQK----MDIIKAIKNDLSDIVTDDTGYYTLLS 713
Query: 467 -VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEE 515
+ G + R L +M K +++ P + + +D +V R EE
Sbjct: 714 NIYAEEGEWEEFRRLRSAM-KSSNLKKVPGYSAIEIDQ--KVFRFGAGEE 760
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 148/313 (47%), Gaps = 17/313 (5%)
Query: 289 EPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVI 348
+P LI YA S S VF+ + + LI L AA+ + ++
Sbjct: 33 DPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV 92
Query: 349 KES-KPNAYTFGSVLNA-VGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRG 406
E+ + + + F SVL A G+ E +S+ G + H IIK G+D D ++ ++LL MYG+ G
Sbjct: 93 SETTQISKFVFPSVLRACAGSREHLSV--GGKVHGRIIKGGVDDDAVIETSLLCMYGQTG 150
Query: 407 SIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLT 466
++ ++++VF+ + AW+ ++S+ +G+ + FK M + GV PD++T +SV+
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210
Query: 467 VCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSC--MVDMLGRVGRLEEAEELVGQIPGGP 524
C G + R + + + D C ++ M + G L +E + +I
Sbjct: 211 GCAELGCLRIARSVHGQITRKMF---DLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN 267
Query: 525 GLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRK 584
+S +++ + + E E+ + +M +G ++ LY+ ++ ++R+
Sbjct: 268 AVS-WTAMISS---YNRGEFSEKALRSFSEMIKSGIEPNLV--TLYSVLSSCGLIGLIRE 321
Query: 585 GMKSKG--VRKEV 595
G G VR+E+
Sbjct: 322 GKSVHGFAVRREL 334
>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420
OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745
Score = 318 bits (816), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 188/608 (30%), Positives = 325/608 (53%), Gaps = 39/608 (6%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIV--KFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
Y+ C + L G+ LH ++ + V + N LI MY++ G ++ AR+VFD
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
MP ++ VSW A+++GY Q G+ + L M + + +S ++C +E
Sbjct: 121 TMPERNVVSWTALITGYVQAGNE--QEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEP--- 175
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE---VTGDANKVFRRMHDRNVISWTTMIS 233
GKQ+HG+++K+G + V N ++S Y +C +A VF + +N+++W +MI+
Sbjct: 176 -GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIA 234
Query: 234 MNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAIS-----IGNLVKEGRM-IHGLCI 282
+ + A+ +F M DGV + T + + ++ + N V + + +H L +
Sbjct: 235 AFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTV 294
Query: 283 KTNFLSEPSVCNCLITMYAR-FESMQDSEKVFDELS-CREIISWNALISGYAQNGLSLAA 340
K+ +++ V LI +Y+ E D K+F E+S CR+I++WN +I+ +A A
Sbjct: 295 KSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPERAI 354
Query: 341 VQAFFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSAL 398
FG +++ K P+ YTF SVL A ++ +H H+ +IK G +D ++ ++L
Sbjct: 355 --HLFGQLRQEKLSPDWYTFSSVLKACAGL--VTARHALSIHAQVIKGGFLADTVLNNSL 410
Query: 399 LDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
+ Y K GS+ RVF++ + +W +++ A + HG +S++ F++M+ + PDS
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDS 467
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVG 518
TF+++L+ C G + +G +F SM + P +HY+C++DML R R EAEE++
Sbjct: 468 ATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIK 527
Query: 519 QIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKM-EPAGSGSYVLMSNLYAEKGDWE 577
Q+P P V +LLG+CR HGN +G+ AD L ++ EP S SY+ MSN+Y +G +
Sbjct: 528 QMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFN 587
Query: 578 MVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGS---E 634
+ K M++ VRKE SW ++G + +H F+SG P E +YR + L S E
Sbjct: 588 EANLSIKEMETWRVRKEPDLSWTEIG--NKVHEFASGGRHRPDKEAVYRELKRLISWLKE 645
Query: 635 MKYLNSKR 642
M Y+ R
Sbjct: 646 MGYVPEMR 653
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 249/536 (46%), Gaps = 72/536 (13%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGF-EKSDDALSFALRMNLIGVVF-DAV 58
+NMY K G A +F+ + ++VSW +++G+ + ++ F L +++ F +
Sbjct: 103 INMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEF 162
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW---GRLVEARRVF 115
T S+ L+ C + G Q+H L +K GL +YV NA+I+MY R EA VF
Sbjct: 163 TLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVF 218
Query: 116 DEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ + K+ V+WN++++ + Q + G +AI + M G+ D + + S+ +L
Sbjct: 219 EAIKFKNLVTWNSMIAAF-QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDL 277
Query: 176 ---ELGK---QIHGVSIKMGYGTHVSVGNVLMSTYSK-CEVTGDANKVFRRM-HDRNVIS 227
E+ K Q+H +++K G T V L+ YS+ E D K+F M H R++++
Sbjct: 278 VPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVA 337
Query: 228 WTTMIS----MNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
W +I+ + E A+ LF ++R + + P+ TF ++ A + + IH IK
Sbjct: 338 WNGIITAFAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIK 397
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
FL++ + N LI YA+ S+ +VFD++ R+++SWN+++ Y+ +G + +
Sbjct: 398 GGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPV 457
Query: 344 FFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYG 403
F + + P++ TF ++L+A A
Sbjct: 458 FQKM--DINPDSATFIALLSACSHA----------------------------------- 480
Query: 404 KRGSIFESQRVFNETQEKSEFA-----WTAIISALARHGDYESVMNQFKEMENKGVRPDS 458
G + E R+F EK E + +I L+R + K+M + PD+
Sbjct: 481 --GRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMP---MDPDA 535
Query: 459 ITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPD-HYSCMVDMLGRVGRLEEA 513
+ ++++L C ++G G+ D LK+ +EP+ Y M ++ G EA
Sbjct: 536 VVWIALLGSCRKHGNTRLGKLAADK-LKEL-VEPTNSMSYIQMSNIYNAEGSFNEA 589
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 10/235 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTY 60
++ Y K G D + +F+++++ D+VSWN++L + S + + D+ T+
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATF 470
Query: 61 STALSFCLDHEGFL-FGLQL-HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEM 118
LS C H G + GL++ S+ K ++ +I M SR R EA V +M
Sbjct: 471 IALLSAC-SHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQM 529
Query: 119 P-NKDSVSWNAILSGYTQDGDYGVEAILA--LIEMMRKGLRLDHVSFTSAASACG--HEK 173
P + D+V W A+L + G+ + + A L E++ + ++ ++ +A G +E
Sbjct: 530 PMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEA 589
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISW 228
NL + + K + +GN + S D V+R + + +ISW
Sbjct: 590 NLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYREL--KRLISW 642
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 318 bits (816), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 193/590 (32%), Positives = 315/590 (53%), Gaps = 48/590 (8%)
Query: 78 QLHSLIVKFGLDSEVYVGNALITM--YSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQ 135
Q H +++ G S+ Y + L M S + L AR+VFDE+P +S +WN ++ Y
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 136 DGDYGVEAILALIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHV 194
D V +I A ++M+ + + +F A +L LG+ +HG+++K G+ V
Sbjct: 108 GPD-PVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 195 SVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLD 249
V N L+ Y C A KVF + +++V+SW +MI+ + + A+ LFK+M +
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 250 GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDS 309
V + VT +G++ A + ++ GR + + ++ N ++ MY + S++D+
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 310 EKVFD-------------------------------ELSCREIISWNALISGYAQNGLSL 338
+++FD + ++I++WNALIS Y QNG
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 339 AAVQAF--FGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS 396
A+ F + K K N T S L+A A+ +L+ G+ HS+I K G+ + V S
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSA--CAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 397 ALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRP 456
AL+ MY K G + +S+ VFN +++ F W+A+I LA HG ++ F +M+ V+P
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 457 DSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEEL 516
+ +TF +V C G++ + LF M +Y I P HY+C+VD+LGR G LE+A +
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 517 VGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDW 576
+ +P P SV +LLGAC+IH N+ + E L+++EP G++VL+SN+YA+ G W
Sbjct: 525 IEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKW 584
Query: 577 EMVAILRKGMKSKGVRKEVGFSWADVGDIDGL-HGFSSGDNTHPRSEEIY 625
E V+ LRK M+ G++KE G S +IDG+ H F SGDN HP SE++Y
Sbjct: 585 ENVSELRKHMRVTGLKKEPGCSSI---EIDGMIHEFLSGDNAHPMSEKVY 631
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 212/470 (45%), Gaps = 53/470 (11%)
Query: 16 IFNNLNNPDIVSWNTVLSGFEK-SDDALSFALRMNLIG---VVFDAVTYSTALSFCLDHE 71
+F+ + P+ +WNT++ + D LS ++++ + T+ + +
Sbjct: 86 VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145
Query: 72 GFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILS 131
G LH + VK + S+V+V N+LI Y G L A +VF + KD VSWN++++
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMIN 205
Query: 132 GYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYG 191
G+ Q G +A+ +M + ++ HV+ SAC +NLE G+Q+ +
Sbjct: 206 GFVQKGSPD-KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN 264
Query: 192 THVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----------------SM 234
++++ N ++ Y+KC DA ++F M +++ ++WTTM+ SM
Sbjct: 265 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSM 324
Query: 235 NREDAVS-------------------LFKEMRLD-GVCPNDVTFIGLIHAISIGNLVKEG 274
++D V+ +F E++L + N +T + + A + ++ G
Sbjct: 325 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 384
Query: 275 RMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQN 334
R IH K V + LI MY++ ++ S +VF+ + R++ W+A+I G A +
Sbjct: 385 RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 444
Query: 335 GLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAA----EDISLKHGQRCHSHIIKVGLD 389
G AV F+ + + + KPN TF +V A E SL H + G+
Sbjct: 445 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN-----YGIV 499
Query: 390 SDPIVGSALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGD 438
+ + ++D+ G+ G + ++ + S W A++ A H +
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 191/444 (43%), Gaps = 49/444 (11%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++ Y G D A +F + D+VSWN++++GF + D AL +M V
Sbjct: 173 IHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASH 232
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT LS C FG Q+ S I + ++ + + NA++ MY++ G + +A+R+FD
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 118 MPNKDSVSWNAILSGYTQDGDYGV------------------------------EAILAL 147
M KD+V+W +L GY DY EA++
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 148 IEM-MRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSK 206
E+ ++K ++L+ ++ S SAC LELG+ IH K G + V + L+ YSK
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412
Query: 207 CEVTGDANKVFRRMHDRNVISWTTMI---SMN--REDAVSLFKEMRLDGVCPNDVTFIGL 261
C + +VF + R+V W+ MI +M+ +AV +F +M+ V PN VTF +
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 472
Query: 262 IHAISIGNLVKEGR-MIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCRE 320
A S LV E + H + + E C++ + R ++ + K + +
Sbjct: 473 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPP 532
Query: 321 IIS-WNALISG---YAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHG 376
S W AL+ +A L+ A + + ++ +G E++S
Sbjct: 533 STSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVS---- 588
Query: 377 QRCHSHIIKVGLDSDPIVGSALLD 400
H+ GL +P S +D
Sbjct: 589 -ELRKHMRVTGLKKEPGCSSIEID 611
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 101/232 (43%), Gaps = 12/232 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K G +K+ +FN++ D+ W+ ++ G ++A+ +M V +
Sbjct: 407 IHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG 466
Query: 58 VTYSTALSFCLDHEGFLFGLQ--LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVF 115
VT++ C H G + + H + +G+ E ++ + R G L +A +
Sbjct: 467 VTFTNVFCAC-SHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525
Query: 116 DEMPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMRKGLRLD--HVSFTSAASACGHE 172
+ MP S S W A+L + + A +A ++ R D HV ++ + G
Sbjct: 526 EAMPIPPSTSVWGALLGACKIHANLNL-AEMACTRLLELEPRNDGAHVLLSNIYAKLGKW 584
Query: 173 KNL-ELGKQIHGVSIKMGYG-THVSVGNVLMSTYSKCEVTGDANKVFRRMHD 222
+N+ EL K + +K G + + + ++ S + KV+ ++H+
Sbjct: 585 ENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHE 636
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 371 ISLKHGQRCHSHIIKVGLDSDPIVGSALLDM--YGKRGSIFESQRVFNETQEKSEFAWTA 428
+SL+ ++ H H+I+ G SDP S L M S+ +++VF+E + + FAW
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 429 IISALARHGDYESVMNQFKEMENKG-VRPDSITF 461
+I A A D + F +M ++ P+ TF
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTF 134
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 201/647 (31%), Positives = 345/647 (53%), Gaps = 17/647 (2%)
Query: 1 MNMYCKSGQFDKALCIFNNL-NNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFD 56
++MY K G A +F + + ++V WN ++ GF S + +L + V
Sbjct: 212 IDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLV 271
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD 116
+ +++ AL C E FG Q+H +VK GL ++ YV +L++MYS+ G + EA VF
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFS 331
Query: 117 EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLE 176
+ +K WNA+++ Y ++ DYG A+ M +K + D + ++ S C
Sbjct: 332 CVVDKRLEIWNAMVAAYAEN-DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYN 390
Query: 177 LGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISM-- 234
GK +H K + ++ + L++ YSKC DA VF+ M ++++++W ++IS
Sbjct: 391 YGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLC 450
Query: 235 ---NREDAVSLFKEMRLD--GVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSE 289
++A+ +F +M+ D + P+ + +A + ++ G +HG IKT +
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN 510
Query: 290 PSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIK 349
V + LI +Y++ + + KVF +S +++WN++IS Y++N L ++ F ++
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 350 ESK-PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSI 408
+ P++ + SVL A+ + SL G+ H + +++G+ SD + +AL+DMY K G
Sbjct: 571 QGIFPDSVSITSVLVAISSTA--SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFS 628
Query: 409 FESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVC 468
++ +F + Q KS W +I HGD + ++ F EM+ G PD +TFLS+++ C
Sbjct: 629 KYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISAC 688
Query: 469 GRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSV 528
+G + +G+++F+ M +DY IEP+ +HY+ MVD+LGR G LEEA + +P S+
Sbjct: 689 NHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSI 748
Query: 529 LQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKS 588
LL A R H NVE+G A+ L++MEP +YV + NLY E G A L MK
Sbjct: 749 WLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKE 808
Query: 589 KGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEM 635
KG+ K+ G SW +V D + F SG ++ P EI+ + L S M
Sbjct: 809 KGLHKQPGCSWIEVSDRTNV--FFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 272/544 (50%), Gaps = 31/544 (5%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNP-------DIVSWNTVLSG---FEKSDDALSFALRMNL 50
+NMY K G D A+ +F+ + D+ WN+++ G F + + + RM +
Sbjct: 102 VNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLV 161
Query: 51 IGVVFDAVTYSTALSFCLDHEGFLF--GLQLHSLIVKFGLDSEVYVGNALITMYSRWGRL 108
GV DA + S +S F G Q+H +++ LD++ ++ ALI MY ++G
Sbjct: 162 FGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLS 221
Query: 109 VEARRVFDEMPNKDSVS-WNAILSGYTQDGDYGVEAILALIEMMR-KGLRLDHVSFTSAA 166
++A RVF E+ +K +V WN ++ G+ G E+ L L + + ++L SFT A
Sbjct: 222 IDAWRVFVEIEDKSNVVLWNVMIVGFGGSGI--CESSLDLYMLAKNNSVKLVSTSFTGAL 279
Query: 167 SACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVI 226
AC +N G+QIH +KMG V L+S YSKC + G+A VF + D+ +
Sbjct: 280 GACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLE 339
Query: 227 SWTTMISMNRED-----AVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLC 281
W M++ E+ A+ LF MR V P+ T +I S+ L G+ +H
Sbjct: 340 IWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL 399
Query: 282 IKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAV 341
K S ++ + L+T+Y++ D+ VF + +++++W +LISG +NG A+
Sbjct: 400 FKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEAL 459
Query: 342 QAFFGVIKES----KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSA 397
+ FG +K+ KP++ SV NA E +L+ G + H +IK GL + VGS+
Sbjct: 460 KV-FGDMKDDDDSLKPDSDIMTSVTNACAGLE--ALRFGLQVHGSMIKTGLVLNVFVGSS 516
Query: 398 LLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPD 457
L+D+Y K G + +VF ++ AW ++IS +R+ E ++ F M ++G+ PD
Sbjct: 517 LIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPD 576
Query: 458 SITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHY-SCMVDMLGRVGRLEEAEEL 516
S++ SVL + KG+ L L+ PS H + ++DM + G + AE +
Sbjct: 577 SVSITSVLVAISSTASLLKGKSLHGYTLR--LGIPSDTHLKNALIDMYVKCGFSKYAENI 634
Query: 517 VGQI 520
++
Sbjct: 635 FKKM 638
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 211/447 (47%), Gaps = 23/447 (5%)
Query: 59 TYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD-- 116
T+ + L C +G +H +V G + ++ +L+ MY + G L A +VFD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 117 -----EMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGH 171
+ +D WN+++ GY + + E + M+ G+R D S + S
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFK-EGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 172 EKNL--ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR-NVISW 228
E N E GKQIHG ++ T + L+ Y K ++ DA +VF + D+ NV+ W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 229 TTMI-----SMNREDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIK 283
MI S E ++ L+ + + V +F G + A S GR IH +K
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 284 TNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQA 343
++P VC L++MY++ + ++E VF + + + WNA+++ YA+N +A+
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD- 359
Query: 344 FFGVIKESK--PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDM 401
FG +++ P+++T +V++ +G+ H+ + K + S + SALL +
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLG--LYNYGKSVHAELFKRPIQSTSTIESALLTL 417
Query: 402 YGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEM--ENKGVRPDSI 459
Y K G ++ VF +EK AW ++IS L ++G ++ + F +M ++ ++PDS
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477
Query: 460 TFLSVLTVCGRNGMIHKGRHLFDSMLK 486
SV C + G + SM+K
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSMIK 504
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 27/287 (9%)
Query: 249 DGVCP---NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFES 305
DG P + TF L+ A S + G+ IHG + + +P + L+ MY +
Sbjct: 51 DGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGF 110
Query: 306 MQDSEKVFDE-------LSCREIISWNALISGYAQ-----NGLSLAAVQAFFGVIKESKP 353
+ + +VFD +S R++ WN++I GY + G+ FGV +P
Sbjct: 111 LDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGV----RP 166
Query: 354 NAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQR 413
+A++ V++ + + + G++ H +++ LD+D + +AL+DMY K G ++ R
Sbjct: 167 DAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWR 226
Query: 414 VFNETQEKSEFA-WTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
VF E ++KS W +I G ES ++ + +N V+ S +F L C ++
Sbjct: 227 VFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSE 286
Query: 473 MIHKGRHLFDSMLK-DYHIEPSPDHYSC--MVDMLGRVGRLEEAEEL 516
GR + ++K H +P Y C ++ M + G + EAE +
Sbjct: 287 NSGFGRQIHCDVVKMGLHNDP----YVCTSLLSMYSKCGMVGEAETV 329
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 317 bits (813), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 298/556 (53%), Gaps = 14/556 (2%)
Query: 79 LHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGD 138
+H+ ++K S+V+VG A + M+ + + A +VF+ MP +D+ +WNA+LSG+ Q G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG- 132
Query: 139 YGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGN 198
+ +A EM + D V+ + + EK+L+L + +H V I++G V+V N
Sbjct: 133 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 199 VLMSTYSKCEVTGDANKVFRRMH--DRNVISWTTMISM-----NREDAVSLFKEMRLDGV 251
+STY KC A VF + DR V+SW +M DA L+ M +
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 252 CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEK 311
P+ TFI L + + +GR+IH I + N I+MY++ E +
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 312
Query: 312 VFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAED 370
+FD ++ R +SW +ISGYA+ G A+ F +IK KP+ T S+++ G
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG- 371
Query: 371 ISLKHGQRCHSHIIKVGLDSDPI-VGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAI 429
SL+ G+ + G D + + +AL+DMY K GSI E++ +F+ T EK+ WT +
Sbjct: 372 -SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTM 430
Query: 430 ISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYH 489
I+ A +G + + F +M + +P+ ITFL+VL C +G + KG F M + Y+
Sbjct: 431 IAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 490
Query: 490 IEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIA 549
I P DHYSCMVD+LGR G+LEEA EL+ + P + +LL AC+IH NV++ E+ A
Sbjct: 491 ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAA 550
Query: 550 DALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLH 609
++L +EP + YV M+N+YA G W+ A +R MK + ++K G S V + H
Sbjct: 551 ESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN--H 608
Query: 610 GFSSGDNTHPRSEEIY 625
F+ G++ H +E IY
Sbjct: 609 SFTVGEHGHVENEVIY 624
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 226/456 (49%), Gaps = 29/456 (6%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKS---DDALSFALRMNLIGVVFDA 57
++M+ K D A +F + D +WN +LSGF +S D A S M L + D+
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDE 117
VT T + + +H++ ++ G+D +V V N I+ Y + G L A+ VF+
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 118 MPNKDS--VSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNL 175
+ D VSWN++ Y+ G+ +A M+R+ + D +F + A++C + + L
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGE-AFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETL 272
Query: 176 ELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMISMN 235
G+ IH +I +G + N +S YSK E T A +F M R +SWT MIS
Sbjct: 273 TQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGY 332
Query: 236 RE-----DAVSLFKEMRLDGVCPNDVTFIGLIH------AISIGNLVKEGRMIHGLCIKT 284
E +A++LF M G P+ VT + LI ++ G + I+G C +
Sbjct: 333 AEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG-CKRD 391
Query: 285 NFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAF 344
N + +CN LI MY++ S+ ++ +FD + +++W +I+GYA NG+ L A++ F
Sbjct: 392 NVM----ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 345 FGVIK-ESKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVG--SALLDM 401
+I + KPN TF +VL A A SL+ G + HI+K + P + S ++D+
Sbjct: 448 SKMIDLDYKPNHITFLAVLQA--CAHSGSLEKGWE-YFHIMKQVYNISPGLDHYSCMVDL 504
Query: 402 YGKRGSIFESQRVFNETQEKSEFA-WTAIISALARH 436
G++G + E+ + K + W A+++A H
Sbjct: 505 LGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIH 540
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 194/415 (46%), Gaps = 31/415 (7%)
Query: 125 SWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGV 184
+WN + D VE++L EM R G ++ +F A AC ++ + +H
Sbjct: 19 AWNLQIREAVNRND-PVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 185 SIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI-----SMNREDA 239
IK + + V VG + + KC A KVF RM +R+ +W M+ S + + A
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 240 VSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITM 299
SLF+EMRL+ + P+ VT + LI + S +K +H + I+ + +V N I+
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 197
Query: 300 YARFESMQDSEKVFDELSC--REIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAY 356
Y + + ++ VF+ + R ++SWN++ Y+ G + A + +++E KP+
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 357 TFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFN 416
TF ++ + E +L G+ HSH I +G D D + + MY K ++ +F+
Sbjct: 258 TFINLAASCQNPE--TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 315
Query: 417 ETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHK 476
++ +WT +IS A GD + + F M G +PD +T LS+++ CG+ G +
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 477 GRHLFDSMLKDYHIEPSPDHYSC----------MVDMLGRVGRLEEAEELVGQIP 521
G+ I+ D Y C ++DM + G + EA ++ P
Sbjct: 376 GK----------WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 205/644 (31%), Positives = 349/644 (54%), Gaps = 42/644 (6%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSDDALSFALRMNLIGVVFDAVTYSTA 63
Y ++G+ ++AL +F + VS+N ++SG+ ++ + L +FD +
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGE-------FELARKLFDEMPERDL 126
Query: 64 LSFCLDHEGFLFGLQLHSLIVKFGL--DSEVYVGNALITMYSRWGRLVEARRVFDEMPNK 121
+S+ + +G++ L F + + +V N +++ Y++ G + +AR VFD MP K
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 122 DSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ- 180
+ VSWNA+LS Y Q+ +E L + R+ L VS+ +K + +Q
Sbjct: 187 NDVSWNALLSAYVQNSK--MEEACMLFK-SRENWAL--VSWNCLLGGFVKKKKIVEARQF 241
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS---MNR- 236
++++ V N +++ Y++ +A ++F ++V +WT M+S NR
Sbjct: 242 FDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 237 -EDAVSLFKEMRLDGVCP--NDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVC 293
E+A LF +M P N+V++ ++ G ++ + + + N S
Sbjct: 297 VEEARELFDKM------PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV----STW 346
Query: 294 NCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAAVQAFFGVIKE-SK 352
N +IT YA+ + +++ +FD++ R+ +SW A+I+GY+Q+G S A++ F + +E +
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 353 PNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQ 412
N +F S L+ A+ ++L+ G++ H ++K G ++ VG+ALL MY K GSI E+
Sbjct: 407 LNRSSFSSALST--CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN 464
Query: 413 RVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSITFLSVLTVCGRNG 472
+F E K +W +I+ +RHG E + F+ M+ +G++PD T ++VL+ C G
Sbjct: 465 DLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTG 524
Query: 473 MIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSL 532
++ KGR F +M +DY + P+ HY+CMVD+LGR G LE+A L+ +P P ++ +L
Sbjct: 525 LVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTL 584
Query: 533 LGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVR 592
LGA R+HGN E+ E AD + MEP SG YVL+SNLYA G W V LR M+ KGV+
Sbjct: 585 LGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVK 644
Query: 593 KEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECLGSEMK 636
K G+SW ++ + H FS GD HP +EI+ E L MK
Sbjct: 645 KVPGYSWIEIQ--NKTHTFSVGDEFHPEKDEIFAFLEELDLRMK 686
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 177/380 (46%), Gaps = 66/380 (17%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEKSD---DALSFALRMNLIGVV-FD 56
++ Y ++ + ++A +F + N +VSWN +L GF K +A F MN+ VV ++
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN 254
Query: 57 AVTYSTALSFCLDHEGFLFG-----------------------LQLHSLIVKFGLDSEVY 93
+ A S +D LF + L K +EV
Sbjct: 255 TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV- 313
Query: 94 VGNALITMY---------------------SRWGRLV----------EARRVFDEMPNKD 122
NA++ Y S W ++ EA+ +FD+MP +D
Sbjct: 314 SWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373
Query: 123 SVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIH 182
VSW A+++GY+Q G + EA+ ++M R+G RL+ SF+SA S C LELGKQ+H
Sbjct: 374 PVSWAAMIAGYSQSG-HSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLH 432
Query: 183 GVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMIS-MNR----E 237
G +K GY T VGN L+ Y KC +AN +F+ M ++++SW TMI+ +R E
Sbjct: 433 GRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGE 492
Query: 238 DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRM-IHGLCIKTNFLSEPSVCNCL 296
A+ F+ M+ +G+ P+D T + ++ A S LV +GR + + + C+
Sbjct: 493 VALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACM 552
Query: 297 ITMYARFESMQDSEKVFDEL 316
+ + R ++D+ + +
Sbjct: 553 VDLLGRAGLLEDAHNLMKNM 572
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 219/476 (46%), Gaps = 43/476 (9%)
Query: 89 DSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALI 148
DS++ N I+ Y R GR EA RVF MP SVS+N ++SGY ++G++ + L
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKL-FD 119
Query: 149 EMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCE 208
EM + D VS+ G+ +N LGK I V N ++S Y++
Sbjct: 120 EMPER----DLVSWNVMIK--GYVRNRNLGKARELFEIMP--ERDVCSWNTMLSGYAQNG 171
Query: 209 VTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEMRLDGVCPNDVTFIGLIH 263
DA VF RM ++N +SW ++S E+A LFK + V++ L
Sbjct: 172 CVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCL-- 225
Query: 264 AISIGNLVKEGRMIHGLCIKTNFLSEPSV-----CNCLITMYARFESMQDSEKVFDELSC 318
+G VK+ +++ F +V N +IT YA+ + ++ ++FDE
Sbjct: 226 ---LGGFVKKKKIVEA----RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 319 REIISWNALISGYAQNGLSLAAVQAFFGVIKESKPNAYTFGSVLNAVGAAEDISLKHGQR 378
+++ +W A++SGY QN + A + F K + N ++ ++L E + +
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELF---DKMPERNEVSWNAMLAGYVQGERMEMA---- 331
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
+ V + + ++ Y + G I E++ +F++ ++ +W A+I+ ++ G
Sbjct: 332 --KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGH 389
Query: 439 YESVMNQFKEMENKGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYS 498
+ F +ME +G R + +F S L+ C + G+ L ++K + E +
Sbjct: 390 SFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY-ETGCFVGN 448
Query: 499 CMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMK 554
++ M + G +EEA +L ++ G +S + G R HG E+ R +++ +
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR-HGFGEVALRFFESMKR 503
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 3 MYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVT 59
MYCK G ++A +F + DIVSWNT+++G+ + + AL F M G+ D T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 60 YSTALSFCLDHEGFL-FGLQ-LHSLIVKFGL--DSEVYVGNALITMYSRWGRLVEARRVF 115
LS C H G + G Q +++ +G+ +S+ Y ++ + R G L +A +
Sbjct: 513 MVAVLSAC-SHTGLVDKGRQYFYTMTQDYGVMPNSQHYA--CMVDLLGRAGLLEDAHNLM 569
Query: 116 DEMP-NKDSVSWNAILS-----GYTQDGDYGVEAILAL 147
MP D+ W +L G T+ + + I A+
Sbjct: 570 KNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAM 607
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 201/667 (30%), Positives = 327/667 (49%), Gaps = 107/667 (16%)
Query: 75 FGLQL-HSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPNKDSVSWNAILSGY 133
F QL H ++K GL VY+ N L+ +YS+ G + AR++FDEMP + + SWN +LS Y
Sbjct: 31 FTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAY 90
Query: 134 TQDGDYGV------------------------------EAILALIEMMRKGLRLDHVSFT 163
++ GD +AI + +M+++G+ + T
Sbjct: 91 SKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 164 SAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDR 223
+ ++ + +E GK++H +K+G +VSV N L++ Y+KC A VF RM R
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 224 NVISWTTMISMNRE------------------------------------DAVSLFKEMR 247
++ SW MI+++ + A+ +F +M
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 248 LDGV-CPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYAR---- 302
D + P+ T ++ A + + G+ IH + T F V N LI+MY+R
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 303 -----------------------------FESMQDSEKVFDELSCREIISWNALISGYAQ 333
M ++ +F L R++++W A+I GY Q
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 334 NGLSLAAVQAFFGVIKE-SKPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDP 392
+G A+ F ++ +PN+YT ++L+ + SL HG++ H +K G
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA--SLSHGKQIHGSAVKSGEIYSV 448
Query: 393 IVGSALLDMYGKRGSIFESQRVFNETQ-EKSEFAWTAIISALARHGDYESVMNQFKEMEN 451
V +AL+ MY K G+I + R F+ + E+ +WT++I ALA+HG E + F+ M
Sbjct: 449 SVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 508
Query: 452 KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEPSPDHYSCMVDMLGRVGRLE 511
+G+RPD IT++ V + C G++++GR FD M I P+ HY+CMVD+ GR G L+
Sbjct: 509 EGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQ 568
Query: 512 EAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKMEPAGSGSYVLMSNLYA 571
EA+E + ++P P + SLL ACR+H N+++G+ A+ L+ +EP SG+Y ++NLY+
Sbjct: 569 EAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYS 628
Query: 572 EKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDNTHPRSEEIYRMAECL 631
G WE A +RK MK V+KE GFSW +V +H F D THP EIY + +
Sbjct: 629 ACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK--HKVHVFGVEDGTHPEKNEIYMTMKKI 686
Query: 632 GSEMKYL 638
E+K +
Sbjct: 687 WDEIKKM 693
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 154/604 (25%), Positives = 262/604 (43%), Gaps = 125/604 (20%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFE---KSDDALSFALRMNLIGVVFDA 57
++ Y K G D F+ L D VSW T++ G++ + A+ M G+
Sbjct: 87 LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQ 146
Query: 58 VTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFD- 116
T + L+ G ++HS IVK GL V V N+L+ MY++ G + A+ VFD
Sbjct: 147 FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDR 206
Query: 117 ------------------------------EMPNKDSVSWNAILSGYTQDGDYGVEAILA 146
+M +D V+WN+++SG+ Q G Y + A+
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG-YDLRALDI 265
Query: 147 LIEMMRKG-LRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
+M+R L D + S SAC + + L +GKQIH + G+ V N L+S YS
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 206 KC---EVT---------------------------GDANK---VFRRMHDRNVISWTTMI 232
+C E GD N+ +F + DR+V++WT MI
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 233 SMNRE-----DAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFL 287
+ +A++LF+ M G PN T ++ S + G+ IHG +K+ +
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 288 SEPSVCNCLITMYARFESMQDSEKVFDELSC-REIISWNALISGYAQNGLSLAAVQAFFG 346
SV N LITMYA+ ++ + + FD + C R+ +SW ++I AQ+G + A++ F
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 347 VIKES-KPNAYTFGSVLNAVGAAEDISLKHGQRCHSHIIKVGLDSDPIVGS-----ALLD 400
++ E +P+ T+ V +A A L + R + ++K D D I+ + ++D
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHA---GLVNQGRQYFDMMK---DVDKIIPTLSHYACMVD 559
Query: 401 MYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGDYESVMNQFKEMENKGVRPDSIT 460
++G+ G + QE EF +E + PD +T
Sbjct: 560 LFGRAGLL----------QEAQEF------------------------IEKMPIEPDVVT 585
Query: 461 FLSVLTVCGRNGMIHKGRHLFDSMLKDYHIEP-SPDHYSCMVDMLGRVGRLEEAEELVGQ 519
+ S+L+ C + I G+ + +L +EP + YS + ++ G+ EEA ++
Sbjct: 586 WGSLLSACRVHKNIDLGKVAAERLLL---LEPENSGAYSALANLYSACGKWEEAAKIRKS 642
Query: 520 IPGG 523
+ G
Sbjct: 643 MKDG 646
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 90/232 (38%), Gaps = 45/232 (19%)
Query: 1 MNMYCKSGQFDKALCIFNNLN-NPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFD 56
+ MY K+G A F+ + D VSW +++ + +++AL M + G+ D
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514
Query: 57 AVTYSTALSFCLDHEGFL-FGLQLHSLIVKFGLDSEVYVGNA-LITMYSRWGRLVEARRV 114
+TY S C H G + G Q ++ A ++ ++ R G L EA+
Sbjct: 515 HITYVGVFSAC-THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEF 573
Query: 115 FDEMP-NKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEK 173
++MP D V+W ++LS AC K
Sbjct: 574 IEKMPIEPDVVTWGSLLS------------------------------------ACRVHK 597
Query: 174 NLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
N++LGK + + + + + L + YS C +A K+ + M D V
Sbjct: 598 NIDLGK-VAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 290/500 (58%), Gaps = 14/500 (2%)
Query: 146 ALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYS 205
AL+EM G + + + +AC ++ L G+++H IK Y + L+ Y
Sbjct: 39 ALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYG 98
Query: 206 KCEVTGDANKVFRRMHDRNVISWTTMISM-----NREDAVSLFKEM-RLDGVCPNDVTFI 259
KC+ DA KV M ++NV+SWT MIS + +A+++F EM R DG PN+ TF
Sbjct: 99 KCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK-PNEFTFA 157
Query: 260 GLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCR 319
++ + + + G+ IHGL +K N+ S V + L+ MYA+ ++++ ++F+ L R
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
Query: 320 EIISWNALISGYAQNGLSLAAVQAFFGVIKES-KPNAYTFGSVLNAVGAAEDISLKHGQR 378
+++S A+I+GYAQ GL A++ F + E PN T+ S+L A+ L HG++
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLA--LLDHGKQ 275
Query: 379 CHSHIIKVGLDSDPIVGSALLDMYGKRGSIFESQRVFNETQEKSEFAWTAIISALARHGD 438
H H+++ L ++ ++L+DMY K G++ ++R+F+ E++ +W A++ ++HG
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335
Query: 439 YESVMNQFKEMEN-KGVRPDSITFLSVLTVCGRNGMIHKGRHLFDSMLK-DYHIEPSPDH 496
V+ F+ M + K V+PD++T L+VL+ C M G ++FD M+ +Y +P +H
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH 395
Query: 497 YSCMVDMLGRVGRLEEAEELVGQIPGGPGLSVLQSLLGACRIHGNVEMGERIADALMKME 556
Y C+VDMLGR GR++EA E + ++P P VL SLLGACR+H +V++GE + L+++E
Sbjct: 396 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIE 455
Query: 557 PAGSGSYVLMSNLYAEKGDWEMVAILRKGMKSKGVRKEVGFSWADVGDIDGLHGFSSGDN 616
P +G+YV++SNLYA G W V +R M K V KE G SW + LH F + D
Sbjct: 456 PENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSW--IQHEQTLHYFHANDR 513
Query: 617 THPRSEEIYRMAECLGSEMK 636
THPR EE+ + + +MK
Sbjct: 514 THPRREEVLAKMKEISIKMK 533
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 194/377 (51%), Gaps = 16/377 (4%)
Query: 46 LRMNLIGVVFDAVTYSTALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRW 105
L M ++G Y L+ CLD G ++H+ ++K Y+ L+ Y +
Sbjct: 41 LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKC 100
Query: 106 GRLVEARRVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSA 165
L +AR+V DEMP K+ VSW A++S Y+Q G + EA+ EMMR + + +F +
Sbjct: 101 DCLEDARKVLDEMPEKNVVSWTAMISRYSQTG-HSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 166 ASACGHEKNLELGKQIHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNV 225
++C L LGKQIHG+ +K Y +H+ VG+ L+ Y+K +A ++F + +R+V
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 226 ISWTTMISMNR-----EDAVSLFKEMRLDGVCPNDVTFIGLIHAISIGNLVKEGRMIHGL 280
+S T +I+ E+A+ +F + +G+ PN VT+ L+ A+S L+ G+ H
Sbjct: 220 VSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCH 279
Query: 281 CIKTNFLSEPSVCNCLITMYARFESMQDSEKVFDELSCREIISWNALISGYAQNGLSLAA 340
++ + N LI MY++ ++ + ++FD + R ISWNA++ GY+++GL
Sbjct: 280 VLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV 339
Query: 341 VQAFFGVIKES--KPNAYTFGSVLNAV--GAAEDISLK--HGQRCHSHIIKVGLDSDPIV 394
++ F + E KP+A T +VL+ G ED L G + K G +
Sbjct: 340 LELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH---- 395
Query: 395 GSALLDMYGKRGSIFES 411
++DM G+ G I E+
Sbjct: 396 YGCIVDMLGRAGRIDEA 412
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 156/311 (50%), Gaps = 14/311 (4%)
Query: 4 YCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDAVTY 60
Y K + A + + + ++VSW ++S + + S +AL+ M + T+
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 61 STALSFCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEARRVFDEMPN 120
+T L+ C+ G G Q+H LIVK+ DS ++VG++L+ MY++ G++ EAR +F+ +P
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 121 KDSVSWNAILSGYTQDGDYGVEAILALIEMMRKGLRLDHVSFTSAASACGHEKNLELGKQ 180
+D VS AI++GY Q G EA+ + +G+ ++V++ S +A L+ GKQ
Sbjct: 217 RDVVSCTAIIAGYAQLG-LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 181 IHGVSIKMGYGTHVSVGNVLMSTYSKCEVTGDANKVFRRMHDRNVISWTTMI------SM 234
H ++ + + N L+ YSKC A ++F M +R ISW M+ +
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335
Query: 235 NREDAVSLFKEMRLDG-VCPNDVTFIGLIHAISIGNLVKEGRMIHGLCIKTNFLSEPSV- 292
RE + LF+ MR + V P+ VT + ++ S G + G I + + ++P
Sbjct: 336 GRE-VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTE 394
Query: 293 -CNCLITMYAR 302
C++ M R
Sbjct: 395 HYGCIVDMLGR 405
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 17/202 (8%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALSFALRMNLIGVVFDA 57
++MY K+GQ +A IF L D+VS +++G+ + ++AL R++ G+ +
Sbjct: 195 LDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNY 254
Query: 58 VTYS---TALS--FCLDHEGFLFGLQLHSLIVKFGLDSEVYVGNALITMYSRWGRLVEAR 112
VTY+ TALS LDH G Q H +++ L + N+LI MYS+ G L AR
Sbjct: 255 VTYASLLTALSGLALLDH-----GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAR 309
Query: 113 RVFDEMPNKDSVSWNAILSGYTQDGDYGVEAILALIEMMR--KGLRLDHVSFTSAASACG 170
R+FD MP + ++SWNA+L GY++ G G E +L L +MR K ++ D V+ + S C
Sbjct: 310 RLFDNMPERTAISWNAMLVGYSKHG-LGRE-VLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
Query: 171 HEKNLELGKQIHGVSIKMGYGT 192
H + + G I + YGT
Sbjct: 368 HGRMEDTGLNIFDGMVAGEYGT 389
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 1 MNMYCKSGQFDKALCIFNNLNNPDIVSWNTVLSGFEK---SDDALS-FALRMNLIGVVFD 56
++MY K G A +F+N+ +SWN +L G+ K + L F L + V D
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 57 AVTYSTALSFCLDHEGFLFGLQLHSLIV--KFGLDSEVYVGNALITMYSRWGRLVEARRV 114
AVT LS C GL + +V ++G ++ M R GR+ EA
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 115 FDEMPNKDS 123
MP+K +
Sbjct: 416 IKRMPSKPT 424
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,346,821
Number of Sequences: 539616
Number of extensions: 10222142
Number of successful extensions: 31240
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 22442
Number of HSP's gapped (non-prelim): 2476
length of query: 648
length of database: 191,569,459
effective HSP length: 124
effective length of query: 524
effective length of database: 124,657,075
effective search space: 65320307300
effective search space used: 65320307300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)