BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006365
(648 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 473 bits (1218), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/513 (48%), Positives = 331/513 (64%), Gaps = 10/513 (1%)
Query: 141 YESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQK 199
Y+++F+ S FG GA ++N E YLK ++L+ +PN G ++ CNSW+++ K
Sbjct: 95 YDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTD 154
Query: 200 RVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPE 259
R+FF N YLPS+TP L +YR EEL +RG+G GERK +DRIYDYDVYNDLGDPDK +
Sbjct: 155 RIFFANNTYLPSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEK 214
Query: 260 LARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYS 319
ARPVLGG PYPRR RTGR + D SEK Y+PRDEAF +K F A + S
Sbjct: 215 YARPVLGGSALPYPRRGRTGRGKTRKDPNSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKS 274
Query: 320 VLHALVPSLETAFVDP--DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIED 377
V ++P L AF L F F+ + L+ GV LP T +P + +
Sbjct: 275 VAQDVLPVLTDAFDGNLLSLDFDNFAEVRKLYEGGVTLPTNFLSNI--TPIPIIKELFRT 332
Query: 378 TGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPP 437
G+ L + P+ M DK W DEEF+R+T+AGLNP I++I E+PL S LD + YG
Sbjct: 333 DGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDH 392
Query: 438 ESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFF 497
IT E +E +GG+ +VE+AI+ KKLFILD+HD +PY+ K+ +T Y +RTIFF
Sbjct: 393 TCIITKEHLEPNLGGL-TVEQAIQNKKLFILDHHDYLIPYLRKINA-NTTKTYATRTIFF 450
Query: 498 LTPAGTLRPIAIELTRPPMNGKPQW--KQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQL 555
L GTL P+AIEL++P G+ +V++PS E ++W LAKA+V+ +DA YHQ+
Sbjct: 451 LKNDGTLTPLAIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACYHQI 510
Query: 556 VSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESS 615
+SHWL TH EP+VIATNR LSV+HPIY+LL PH+R TM IN LAR++LVNADGIIE +
Sbjct: 511 ISHWLNTHAVVEPFVIATNRHLSVVHPIYKLLFPHYRDTMNINSLARKSLVNADGIIEKT 570
Query: 616 FSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
F G+YS+E S+V Y K W F +ALP DL+ R
Sbjct: 571 FLWGRYSLEMSAVIY-KDWVFTDQALPNDLVKR 602
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/513 (47%), Positives = 321/513 (62%), Gaps = 18/513 (3%)
Query: 145 FEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFF 203
FE + FG GA ++N E +L + L+ +PN G + CNSW+++ K+ R+FF
Sbjct: 111 FEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFF 170
Query: 204 TNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARP 263
N YLPS TP L +YR EE +LRG+G G+RK +DRIYDYDVYNDLG+PD RP
Sbjct: 171 VNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGD--PRP 228
Query: 264 VLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLH 322
+LGG PYP R RTGR R TD SEK G YVPRDE F +K F + S+ H
Sbjct: 229 ILGGCSIYPYPLRVRTGRERTRTDPNSEK-PGEVYVPRDENFGHLKSSDFLTYGIKSLSH 287
Query: 323 ALVPSLETAFVDPDLG---FPYFSAIDALFNEGVNLPP--LKQEGFWNTLLPRLVKAIED 377
++P ++A + F F + +L+ G+ LP L Q + LP L +
Sbjct: 288 DVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQ----ISPLPALKEIFRT 343
Query: 378 TGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPP 437
G+N+L F P K DEEF+R+ +AG+NP IR + E+P KSTLDP +YG
Sbjct: 344 DGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQ 403
Query: 438 ESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFF 497
S IT E +E +GG ++VEEA+ ++LFILDY D F+PY+ ++ L + Y +RTI F
Sbjct: 404 TSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILF 462
Query: 498 LTPAGTLRPIAIELTRPPMNGKPQWKQ--VFLPSWHSTECWLWKLAKAHVLAHDAGYHQL 555
L GTL+P+AIEL++P +G + V LP+ + +W LAKAHV+ +D+GYHQL
Sbjct: 463 LKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQL 522
Query: 556 VSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESS 615
VSHWL TH EP+ IATNR LSV+HPIY+LL PH+R T+ INGLARQ+L+NADGIIE S
Sbjct: 523 VSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKS 582
Query: 616 FSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
F PGKYS+E SS Y K W F H+ALP DL+ R
Sbjct: 583 FLPGKYSIEMSSSVY-KNWVFTHQALPADLVKR 614
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 446 bits (1147), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/522 (45%), Positives = 320/522 (61%), Gaps = 16/522 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI R
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/522 (45%), Positives = 320/522 (61%), Gaps = 16/522 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI R
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/522 (45%), Positives = 320/522 (61%), Gaps = 16/522 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI R
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/522 (45%), Positives = 320/522 (61%), Gaps = 16/522 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI R
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/522 (45%), Positives = 320/522 (61%), Gaps = 16/522 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI R
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/522 (45%), Positives = 320/522 (61%), Gaps = 16/522 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI R
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/522 (45%), Positives = 320/522 (61%), Gaps = 16/522 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
NA+GI+E++F P KYS+E SS Y K W F +ALP DLI R
Sbjct: 548 NANGIVETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/548 (45%), Positives = 335/548 (61%), Gaps = 18/548 (3%)
Query: 111 AELDPKTGLDKST-IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYL 169
A+ + K L K+T ++ + G G ++ FE G G GA ++N E +L
Sbjct: 68 ADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFL 127
Query: 170 KDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTIL 228
+ L+ +PN G ++ CNSW+++ K R+FF N+ YLPS+TP L +YR EEL L
Sbjct: 128 VSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNL 187
Query: 229 RGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQ 287
RG+G GERK ++RIYDYDVYNDLGDPDK ARPVLGG PYPRR RTGR D
Sbjct: 188 RGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRTGRKPTRKDP 247
Query: 288 FSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFP-----YF 342
SE R + Y+PRDEAF +K F + SV ++P L++AF DL F F
Sbjct: 248 NSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAF---DLNFTPREFDSF 304
Query: 343 SAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDE 402
+ L++ G+ LP + LP L + G+ L F P+ + K W DE
Sbjct: 305 DEVHGLYSGGIKLPTDIISKI--SPLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDE 362
Query: 403 EFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQ 462
EF+R+ LAG+NP IR + ++P +S LD ++YG S IT E +E + G+ +V+EAI+
Sbjct: 363 EFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGL-TVDEAIQN 421
Query: 463 KKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQ- 521
K+LF+LD+HD +PY+ ++ ST Y +RTI FL GTLRP+AIEL+ P G
Sbjct: 422 KRLFLLDHHDPIMPYLRRINA-TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSG 480
Query: 522 -WKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVM 580
+ QVFLP+ E +W LAKA+V+ +D+ YHQLVSHWL TH EP++IATNR LSV+
Sbjct: 481 AFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVV 540
Query: 581 HPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEA 640
HPIY+LL PH+R TM INGLAR +LVN G+IE +F G+YS+E S+V Y K W F +A
Sbjct: 541 HPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVEMSAVVY-KDWVFTDQA 599
Query: 641 LPKDLISR 648
LP DLI R
Sbjct: 600 LPADLIKR 607
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/522 (45%), Positives = 320/522 (61%), Gaps = 16/522 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
NA+GI+E++F P KYS+E SS Y K W F +ALP DLI R
Sbjct: 548 NANGILETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/522 (45%), Positives = 320/522 (61%), Gaps = 16/522 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YH+L+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHELMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI R
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/522 (45%), Positives = 319/522 (61%), Gaps = 16/522 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
NA+GI E++F P KYS+E SS Y K W F +ALP DLI R
Sbjct: 548 NANGIAETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/522 (45%), Positives = 319/522 (61%), Gaps = 16/522 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YH L+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHALMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
NA+GIIE++F P KYS+E SS Y K W F +ALP DLI R
Sbjct: 548 NANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/522 (45%), Positives = 319/522 (61%), Gaps = 16/522 (3%)
Query: 135 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSK 193
G G + FE G GA ++N E +LK + L+ + N G + CNSW+++
Sbjct: 75 GAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT 134
Query: 194 HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGD 253
K R+FF N Y+PS+TP L YR EEL LRGNG GERK YDRIYDYDVYNDLG+
Sbjct: 135 KLYKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGN 194
Query: 254 PDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTF 312
PDK +LARPVLGG PYPRR RTGR TD +EK+ FYVPRDE +K
Sbjct: 195 PDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDA 254
Query: 313 SAKTVYSVLHALVPSLETAF--VDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 370
S+ + P+ E+AF + F F + L+ G+ LP +T++P
Sbjct: 255 LEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP----RDVISTIIPL 310
Query: 371 -LVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKST 428
++K + T G +IL F P + + W DEEF+R+ +AG+NP IR + E+P KS
Sbjct: 311 PVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSN 370
Query: 429 LDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTT 488
LDP IYG S IT + ++ + +++EA+ ++LF+LDYHD+F+PYV ++ QL S
Sbjct: 371 LDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAK 427
Query: 489 LYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVL 546
Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+
Sbjct: 428 TYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVI 487
Query: 547 AHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALV 606
+D+ YHQL+SHWL TH EP+VIAT+R LSV+HPIY+LL PH+R M IN LARQ+L+
Sbjct: 488 VNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLI 547
Query: 607 NADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648
NA+GI E++F P KYS+E SS Y K W F +ALP DLI R
Sbjct: 548 NANGIGETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/548 (44%), Positives = 333/548 (60%), Gaps = 18/548 (3%)
Query: 111 AELDPKTGLDKST-IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYL 169
A+ + K L K+T ++ + G G ++ FE G G GA ++N E +L
Sbjct: 68 ADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFL 127
Query: 170 KDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTIL 228
+ L+ +PN G ++ CNSW+++ K R+FF N+ YLPS+TP L +YR EEL L
Sbjct: 128 VSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNL 187
Query: 229 RGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQ 287
RG+G GERK ++RIYDYDVYNDLGDPDK ARPVLGG PYPRR RTGR D
Sbjct: 188 RGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRTGRKPTRKDP 247
Query: 288 FSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFP-----YF 342
SE R + Y+PRDEAF +K F + SV ++P L++AF DL F F
Sbjct: 248 NSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAF---DLNFTPREFDSF 304
Query: 343 SAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDE 402
+ L++ G+ LP + LP L + G+ L F P+ + K W DE
Sbjct: 305 DEVHGLYSGGIKLPTDIISKI--SPLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDE 362
Query: 403 EFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQ 462
EF+R+ LAG+NP IR + ++P +S LD ++YG S IT E +E + G+ +V+EAI+
Sbjct: 363 EFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGL-TVDEAIQN 421
Query: 463 KKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQ- 521
K+LF+LD+HD +PY+ ++ ST Y +RTI FL GTLRP+AIEL+ P G
Sbjct: 422 KRLFLLDHHDPIMPYLRRINA-TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSG 480
Query: 522 -WKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVM 580
+ QVFLP+ E +W LAKA+V+ +D+ YHQLVSH L TH EP++IATNR LSV+
Sbjct: 481 AFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHXLNTHAVVEPFIIATNRHLSVV 540
Query: 581 HPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEA 640
HPIY+LL PH+R TM INGLAR + VN G+IE +F G+YS+E S+V Y K W F +A
Sbjct: 541 HPIYKLLHPHYRDTMNINGLARLSXVNDGGVIEQTFLWGRYSVEMSAVVY-KDWVFTDQA 599
Query: 641 LPKDLISR 648
LP DLI R
Sbjct: 600 LPADLIKR 607
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP IR TE P K +TTE++E + +S+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
+ ++Q +FI+D+ L K L + + A + PIAI+L + P +
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 577
P +FLPS + W LAK V + D HQ ++H LRTH +E + IA RQL
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 578 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 619
+HPI++LL H R+T+ IN AR+ L+ G+ + + + G
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATG 446
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP IR TE P K +TTE++E + +S+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
+ ++Q +FI+D+ L K L + + A + PIAI+L + P +
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 577
P +FLPS + W LAK V + D HQ ++H LRTH +E + IA RQL
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 578 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 619
+HPI++LL H R+T+ IN AR+ L+ G+ + + + G
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATG 446
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP IR TE P K +TTE++E + +S+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
+ ++Q +FI+D+ L K L + + A + PIAI+L + P +
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 577
P +FLPS + W LAK V + D HQ ++H LRTH +E + IA RQL
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 578 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 619
+HPI++LL H R+T+ IN AR+ L+ G+ + + + G
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATG 446
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 112/253 (44%), Gaps = 21/253 (8%)
Query: 397 FWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISV 456
+W D F Q L G NP IR + P + E++EK + ++
Sbjct: 250 YWRDDVWFGSQFLNGSNPEVIRRCDKLP------------ENFPVKNEMVEKLLDRGYTL 297
Query: 457 EEAIKQKKLFILDYHDL-FLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPP 515
E+A+K+ +FI DY L +P ++ + T +F+L + PIAI+L + P
Sbjct: 298 EKAMKEGLIFITDYKILEGIPTMDTPEDKRYITT--PLGLFYLKNNDDIIPIAIQLYQQP 355
Query: 516 MNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNR 575
W + TE W W +AK + D YHQ+++H LR H EP +++ R
Sbjct: 356 GENNSIWTPL-----KDTE-WDWIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAVSSWR 409
Query: 576 QLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWR 635
L +HP+++LL PH + M IN L R L+ G + S G + +
Sbjct: 410 NLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYRSVT 469
Query: 636 FDHEALPKDLISR 648
FD L KDL R
Sbjct: 470 FDSYDLVKDLRQR 482
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 586 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 629
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 630 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 689
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 690 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 743
Query: 545 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 604
+ ++ +HQL +H LRTH TE + ++T R L+ HPI++LL PH + I+ + R+
Sbjct: 744 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKE 803
Query: 605 LVNADGIIESSFSPG 619
L+ + GI++ S S G
Sbjct: 804 LIGSGGIVDQSLSLG 818
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 216 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 259
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 260 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 319
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 320 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 373
Query: 545 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 604
+ ++ +HQL +H LRTH TE + ++T R L+ HPI++LL PH + I+ + R+
Sbjct: 374 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKE 433
Query: 605 LVNADGIIESSFSPG 619
L+ + GI++ S S G
Sbjct: 434 LIGSGGIVDQSLSLG 448
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 219 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 262
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 263 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 322
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 323 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 376
Query: 545 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 604
+ ++ +HQL +H LRTH TE + ++T R L+ HP+++LL PH + I+ + R+
Sbjct: 377 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPVFKLLQPHIYGVLAIDTIGRKE 436
Query: 605 LVNADGIIESSFSPG 619
L+ + GI++ S S G
Sbjct: 437 LIGSGGIVDQSLSLG 451
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 38/255 (14%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 216 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 259
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 260 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 319
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 320 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 373
Query: 545 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 604
+ ++ +HQL +H LRTH TE + ++T R L+ HPI++LL PH + I+ + R+
Sbjct: 374 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKE 433
Query: 605 LVNADGIIESSFSPG 619
L + GI++ S S G
Sbjct: 434 LAGSGGIVDQSLSLG 448
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 112/257 (43%), Gaps = 33/257 (12%)
Query: 364 WNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEW 423
WN+L D+ + I + +R + W D F Q L G NP +R E
Sbjct: 108 WNSL---------DSFNRIFWSGQSKLAERVRDSWKEDALFGYQFLNGTNPMLLRHSVEL 158
Query: 424 PLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQ 483
P + + PP +EKE+ G LF D+ L ++
Sbjct: 159 PAR------LKFPPGMEELQAQLEKELQG----------GTLFEADFS--LLDGIKANVI 200
Query: 484 LKSTTLYGSRTIFF-LTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAK 542
L S + L P G L P+ I+L + P G P +FLP+ +W LAK
Sbjct: 201 LSSQQYLAVPLVMLKLQPDGKLLPMVIQL-QLPREGSP-LPPLFLPT---DPPMVWLLAK 255
Query: 543 AHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLAR 602
V + D H+L SH LR H E +AT R L +HPI++LL PHFRYTMEIN AR
Sbjct: 256 CWVRSSDFQLHELHSHLLRGHLMAEVIAVATMRCLPSIHPIFKLLIPHFRYTMEINVRAR 315
Query: 603 QALVNADGIIESSFSPG 619
LV+ GI + S G
Sbjct: 316 NGLVSDLGIFDQVVSTG 332
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 38/255 (14%)
Query: 381 NILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESA 440
N +L TP DR W D F Q L G NP + P
Sbjct: 216 NWILGGTPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFP 259
Query: 441 ITTELIEKEIGGMISVEEAIKQKKLFILDY--------------HDLFLPYVEKVRQLKS 486
+T E + + +++E IK ++I+D+ D+ + ++ ++
Sbjct: 260 VTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEA 319
Query: 487 TTLYGSR--TIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAH 544
Y + +F++ G L PIAI++ + P P W H W +AK
Sbjct: 320 DIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENPIWTP------HEENEHDWMMAKFW 373
Query: 545 VLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQA 604
+ ++ +HQL +H LRTH TE + ++T R L+ HPI++LL PH + I+ + R+
Sbjct: 374 LGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKE 433
Query: 605 LVNADGIIESSFSPG 619
L + GI++ S S G
Sbjct: 434 LWGSGGIVDQSLSLG 448
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 96/222 (43%), Gaps = 22/222 (9%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP +R + P + PP +EKE+
Sbjct: 222 WQEDSLFGYQFLNGANPMLLRRSVQLPARLVF------PPGMEELQAQLEKEL------- 268
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
K LF D+ L V L + L P G L P+ I+L P +
Sbjct: 269 ---KAGTLFEADFA-LLDNIKANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 577
P +FLP+ +W LAK V + D H+L SH LR H E + +AT R L
Sbjct: 325 SSP--PPLFLPT---DPPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMRCL 379
Query: 578 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 619
+HP+++L+ PH RYT+EIN AR LV+ GI + S G
Sbjct: 380 PSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTG 421
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 96/222 (43%), Gaps = 22/222 (9%)
Query: 398 WFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVE 457
W D F Q L G NP +R + P + PP +EKE+
Sbjct: 222 WQEDSLFGYQFLNGANPMLLRRSVQLPARLVF------PPGMEELQAQLEKEL------- 268
Query: 458 EAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMN 517
K LF D+ L V L + L P G L P+ I+L P +
Sbjct: 269 ---KAGTLFEADFA-LLDNIKANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQLHLPKIG 324
Query: 518 GKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQL 577
P +FLP+ +W LAK V + D H+L SH LR H E + +AT R L
Sbjct: 325 SSP--PPLFLPT---DPPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMRCL 379
Query: 578 SVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 619
+HP+++L+ PH RYT+EIN AR LV+ GI + S G
Sbjct: 380 PSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTG 421
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 103/240 (42%), Gaps = 22/240 (9%)
Query: 380 DNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPES 439
D I + ++ + W DE FS Q L G NP +R T P + L P
Sbjct: 50 DQIFWGQKSALAEKVRQCWQDDELFSYQFLNGANPMLLRRSTSLPSRLVL------PSGM 103
Query: 440 AITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLT 499
+EKE+ + LF D+ L +R K L + +
Sbjct: 104 EELRAQLEKEL----------QNGSLFEADFILLDGIPANVIRGEKQY-LAAPLVMLKME 152
Query: 500 PAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHW 559
P G L+P+ I++ P + +FLPS W LAK+ V D H++ H
Sbjct: 153 PNGKLQPMVIQIQPPNPSSPT--PTLFLPSDPPLA---WLLAKSWVRNSDFQLHEIQYHL 207
Query: 560 LRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPG 619
L TH E +AT R L +HPI++ L PH RYTMEIN AR L++ GI + + S G
Sbjct: 208 LNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTG 267
>pdb|3C5I|A Chain A, Crystal Structure Of Plasmodium Knowlesi Choline Kinase,
Pkh_134520
pdb|3C5I|B Chain B, Crystal Structure Of Plasmodium Knowlesi Choline Kinase,
Pkh_134520
pdb|3C5I|C Chain C, Crystal Structure Of Plasmodium Knowlesi Choline Kinase,
Pkh_134520
pdb|3C5I|D Chain D, Crystal Structure Of Plasmodium Knowlesi Choline Kinase,
Pkh_134520
Length = 369
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 167 MYLKDIVLDGLPNGPVNVTCNSWLHSKHDN---KQKRVFFTNKLY---LPSQTPDGLKRY 220
+Y+K I L+ +P W H DN KQ TN+L+ L +T +
Sbjct: 15 LYIKKICLEKVP---------EWNHFTEDNLRVKQILSGLTNQLFEVGLKEETANNYNSI 65
Query: 221 RAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGK 268
R + R G+ + Y+ I +++VY + P+L GG+
Sbjct: 66 RTR--VLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTFNGGR 111
>pdb|2G9H|D Chain D, Crystal Structure Of Staphylococcal Enterotoxin I (Sei) In
Complex With A Human Mhc Class Ii Molecule
Length = 218
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 179 NGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPD-GLKRYRAEELTILRGNGQGERK 237
N + N W++ KH TNK + +Q D L+RY EE I N G+ K
Sbjct: 90 NSARKIPINLWVNGKHKTISTDKISTNKKLVTAQEIDVKLRRYLQEEYNIYGHNSTGKGK 149
Query: 238 TY 239
Y
Sbjct: 150 EY 151
>pdb|4EGV|A Chain A, Crystal Structure Of A Monomeric Scp2-Thiolase Like
Protein Type 1 (Stlp1) From Mycobacterium Smegmatis
pdb|4EGV|B Chain B, Crystal Structure Of A Monomeric Scp2-Thiolase Like
Protein Type 1 (Stlp1) From Mycobacterium Smegmatis
pdb|4EGV|C Chain C, Crystal Structure Of A Monomeric Scp2-Thiolase Like
Protein Type 1 (Stlp1) From Mycobacterium Smegmatis
pdb|4EGV|D Chain D, Crystal Structure Of A Monomeric Scp2-Thiolase Like
Protein Type 1 (Stlp1) From Mycobacterium Smegmatis
pdb|4EGV|E Chain E, Crystal Structure Of A Monomeric Scp2-Thiolase Like
Protein Type 1 (Stlp1) From Mycobacterium Smegmatis
pdb|4EGV|F Chain F, Crystal Structure Of A Monomeric Scp2-Thiolase Like
Protein Type 1 (Stlp1) From Mycobacterium Smegmatis
Length = 520
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 604 ALVNADGIIESSFSPGKYSMEFSSVAYDK--QWRFDHEALPKDLIS 647
ALV A+G I S +S G YS E + D Q + +H+A PK I+
Sbjct: 403 ALVGANGGIASKYSVGIYSTEPADWVADNSAQLQAEHDAQPKVAIT 448
>pdb|3EA6|A Chain A, Atomic Resolution Of Crystal Structure Of Sek
Length = 219
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 174 LDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPD-GLKRYRAEELTILRGNG 232
LD N P+N+ W++ H TNK ++ +Q D L++Y EE I NG
Sbjct: 89 LDKSRNIPINI----WINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEYNIYGHNG 144
Query: 233 QGERKTY 239
+ + Y
Sbjct: 145 TKKGEEY 151
>pdb|2NTS|A Chain A, Crystal Structure Of Sek-Hvb5.1
pdb|2NTT|A Chain A, Crystal Structure Of Sek
pdb|2NTT|B Chain B, Crystal Structure Of Sek
Length = 217
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 174 LDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPD-GLKRYRAEELTILRGNG 232
LD N P+N+ W++ H TNK ++ +Q D L++Y EE I NG
Sbjct: 89 LDKSRNIPINI----WINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEYNIYGHNG 144
Query: 233 QGERKTY 239
+ + Y
Sbjct: 145 TKKGEEY 151
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,440,613
Number of Sequences: 62578
Number of extensions: 915302
Number of successful extensions: 2005
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1863
Number of HSP's gapped (non-prelim): 40
length of query: 648
length of database: 14,973,337
effective HSP length: 105
effective length of query: 543
effective length of database: 8,402,647
effective search space: 4562637321
effective search space used: 4562637321
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)