Query 006365
Match_columns 648
No_of_seqs 296 out of 644
Neff 5.0
Searched_HMMs 46136
Date Thu Mar 28 22:13:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006365.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006365hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02305 lipoxygenase 100.0 2E-188 5E-193 1585.8 51.1 578 66-648 80-666 (918)
2 PLN02264 lipoxygenase 100.0 4E-186 8E-191 1567.6 49.1 577 66-648 83-668 (919)
3 PLN02337 lipoxygenase 100.0 8E-184 2E-188 1553.1 49.6 576 68-648 19-611 (866)
4 PF00305 Lipoxygenase: Lipoxyg 100.0 7E-136 2E-140 1155.6 16.9 428 214-648 1-431 (667)
5 cd01751 PLAT_LH2 PLAT/ LH2 dom 100.0 9.3E-40 2E-44 306.5 14.3 131 68-205 1-137 (137)
6 smart00308 LH2 Lipoxygenase ho 99.3 2.7E-11 5.8E-16 107.9 10.0 83 103-193 20-105 (105)
7 PF01477 PLAT: PLAT/LH2 domain 98.9 6E-09 1.3E-13 93.0 8.6 65 139-203 45-113 (113)
8 cd00113 PLAT PLAT (Polycystin- 98.7 1.4E-07 3E-12 85.4 11.1 91 102-202 19-115 (116)
9 cd02899 PLAT_SR Scavenger rece 98.2 5.2E-06 1.1E-10 76.1 9.2 77 103-193 20-99 (109)
10 cd01756 PLAT_repeat PLAT/LH2 d 97.8 0.00025 5.5E-09 65.3 11.9 94 103-203 20-118 (120)
11 cd01753 PLAT_LOX PLAT domain o 97.8 0.00015 3.3E-09 66.6 10.1 83 103-194 20-106 (113)
12 cd01752 PLAT_polycystin PLAT/L 97.5 0.00073 1.6E-08 62.4 10.5 86 103-195 20-109 (120)
13 cd01757 PLAT_RAB6IP1 PLAT/LH2 97.5 0.00027 5.9E-09 65.4 7.2 54 141-195 43-100 (114)
14 cd01754 PLAT_plant_stress PLAT 97.1 0.0013 2.9E-08 62.1 6.8 55 139-195 58-119 (129)
15 cd01755 PLAT_lipase PLAT/ LH2 41.4 1.3E+02 0.0028 28.0 7.7 50 139-188 46-105 (120)
16 KOG2080 Uncharacterized conser 38.7 27 0.00059 42.5 3.3 54 141-195 1013-1070(1295)
No 1
>PLN02305 lipoxygenase
Probab=100.00 E-value=2.2e-188 Score=1585.82 Aligned_cols=578 Identities=51% Similarity=0.925 Sum_probs=543.4
Q ss_pred eeEEEEEEEEEee-cccCcccccccccccchhhhccCCcEEEEEEecccCCCCCCcc---eeccccccccCCCCCCceEE
Q 006365 66 KSIKVKAVVTVKP-TVGGFLSNISLDQGLDDLGDLFGKSLLLELVSAELDPKTGLDK---STIQDYARKIGADGDGNMQY 141 (648)
Q Consensus 66 ~~~~~~~~v~~~~-~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvs~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~y 141 (648)
...+|||+||||+ +++++++.. ++.+|+++|++||+|+|||||++++|+||+|| ++|++|+++ +...++++.|
T Consensus 80 ~~~~i~~~v~~~~~~~~~~~~~~--~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~gk~~~~~l~~~~~~-~~~~~~~~~~ 156 (918)
T PLN02305 80 GGIDVRAVITIRKKIKEKITEKF--EDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSVESSVRGWLPK-PSNDPHIVEY 156 (918)
T ss_pred cCCeEEEEEEEEeecccchhhcc--cchhhHHHHhhCCeEEEEEEeccccCCCCCcccccchhhccccC-CCCCCCceEE
Confidence 3469999999976 666766543 68999999999999999999999999998554 899999987 3433677899
Q ss_pred EEEEeecCCCCceeEEEEEecCCCceeeeeEEEecCCCCcEEEEecccccCCCCCCcceEEEeCcccCCCCCCHHHHHHH
Q 006365 142 ESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYR 221 (648)
Q Consensus 142 ~~~f~~~~~fG~pgAv~v~n~h~~e~fl~~i~l~~~p~g~i~F~CnsWv~~~~~~~~~riff~n~ayLp~~tp~~L~~~R 221 (648)
+++|+||++||+||||+|+|+|++||||++|+|+++|+|+|||+||||||+.++|+++||||+||+|||++||++|++||
T Consensus 157 ~~~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~R 236 (918)
T PLN02305 157 AADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLR 236 (918)
T ss_pred EEEEeeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhCCCCCCccccCeeeeccccCCCCCCCCCCccccccCCCCCCCCCcccCCCCCCCCCCCCccCCCC---CCcc
Q 006365 222 AEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREG---NFYV 298 (648)
Q Consensus 222 e~EL~~lRG~g~g~rk~~dRiYdydvYnDlG~Pd~~~~~~rpvlGg~~~PyPRR~RTgR~~~~~dp~~e~r~~---~~yv 298 (648)
|+||++|||||+||||+||||||||||||||+||++++++||||||++|||||||||||+|+++||++|||.. .+||
T Consensus 237 e~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~~Yv 316 (918)
T PLN02305 237 REDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVYV 316 (918)
T ss_pred HHHHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccCCCCcCC
Confidence 9999999999999999999999999999999999999999999999669999999999999999999999954 4799
Q ss_pred CCCCccChhhhccchhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHHHhccCCCCCCccccccccch-hH-HHHHHhh
Q 006365 299 PRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL-LP-RLVKAIE 376 (648)
Q Consensus 299 PrDe~F~~~K~~dF~~~~lk~~~~~~lp~l~~~~~~~~~~f~sf~Di~~Ly~~g~~lp~~~~~~~~~~~-~~-~i~e~~~ 376 (648)
||||+|+++|++||+++++|+++|.++|+|+++++.+..+|+||+||++||++|++||.... +..+.. +| .+.+.++
T Consensus 317 PrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~~~~~-~~~~~~p~~~~~~~~i~ 395 (918)
T PLN02305 317 PRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTEEP-KDIGLNPFLGNFMKQVL 395 (918)
T ss_pred CCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCCchhh-hhhhcCCchHHHHHHhh
Confidence 99999999999999999999999999999999998889999999999999999999997321 222222 32 4444458
Q ss_pred ccCCccccccCccccccccccccccHHHHHHHhcCCCccccccccCCCCCCCCCCCcCCCCCCCCcHHHHHHhhCCcccH
Q 006365 377 DTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISV 456 (648)
Q Consensus 377 ~~~~~~lkfp~P~v~~~d~~~W~~DeeFgrQ~LaG~NP~~I~r~~e~P~~s~Ldp~~yG~~~s~It~e~i~~~L~g~~tl 456 (648)
++++.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+|||++||+|+|+||+|||+..|+| +||
T Consensus 396 ~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G-~Tl 474 (918)
T PLN02305 396 SVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEG-MTV 474 (918)
T ss_pred hcccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHhhcCC-CcH
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHHHhcCcEEEeccCcccCchhhhcccCCCceeeeeeeEEEeCCCCceeeEEEEecCCCCCCCCCcceEEeCCCCCCCch
Q 006365 457 EEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECW 536 (648)
Q Consensus 457 eeal~~grLFi~Dy~d~~lp~l~~in~~~g~~~YAp~~Lffl~~dg~L~PIAIqL~~~~~~~~~~~~~VftP~d~~~~~~ 536 (648)
+|||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++.+++||||.++++++|
T Consensus 475 eeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~~d~~~~w 554 (918)
T PLN02305 475 EKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHW 554 (918)
T ss_pred HHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCCCCCCCch
Confidence 99999999999999999999999999999999999999999999999999999999998877777789999987777899
Q ss_pred hHHHHHHHhhhcchhhHHHHHHhhcccccchhHHHHhccCCCCccchhhhcccchhccccccHHHHhhcccCCceeeccc
Q 006365 537 LWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSF 616 (648)
Q Consensus 537 ~W~LAK~~v~~aD~~~HqlisHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LIn~gGiie~~f 616 (648)
.|+||||||++||++|||+|+||++||+||||||||||||||++|||||||+||||+||+||++||++|||+||+||++|
T Consensus 555 ~W~LAK~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiie~~f 634 (918)
T PLN02305 555 IWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEACF 634 (918)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCCCceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHhccCcccCCCCCchhhhcC
Q 006365 617 SPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648 (648)
Q Consensus 617 ~~G~~~~elss~~Yk~~w~F~~~~LP~DL~~R 648 (648)
++|+|+|||++++|++.|+|++++||+||++|
T Consensus 635 spg~~~~elss~aYk~~w~Fd~~~LP~DL~kR 666 (918)
T PLN02305 635 SPGKYAMELSSAAYKSMWRFDMEALPADLIRR 666 (918)
T ss_pred ccchhHHHHHHHHHHhcCcCccccCHHHHHHc
Confidence 99999999999999988999999999999998
No 2
>PLN02264 lipoxygenase
Probab=100.00 E-value=3.9e-186 Score=1567.56 Aligned_cols=577 Identities=49% Similarity=0.919 Sum_probs=542.3
Q ss_pred eeEEEEEEEEEee-cccCcccccccccccchhhhccCCcEEEEEEecccCCCCCC---cc-eeccccccccCCCCCCceE
Q 006365 66 KSIKVKAVVTVKP-TVGGFLSNISLDQGLDDLGDLFGKSLLLELVSAELDPKTGL---DK-STIQDYARKIGADGDGNMQ 140 (648)
Q Consensus 66 ~~~~~~~~v~~~~-~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvs~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~ 140 (648)
.+++|||+||||+ +++++++.. ++.+|+++|++||+|+|||||++++|+||+ |+ ++|++|+++ ....+++++
T Consensus 83 ~~~~i~~~v~~~~~~~~~~~~~~--~~~~D~~~~~~G~~v~lqLVSs~~~~~tg~~~~~~~a~l~~~~~~-~~~~~~~~~ 159 (919)
T PLN02264 83 VKFKVRAVVTVRNKNKEDLKETL--VKHLDAFTDKIGRNVVLELISTQVDPKTKEPKKSKAAVLKDWSKK-SNIKAERVH 159 (919)
T ss_pred eEEEEEEEEEEEeccccchhhcc--cchhhHHHHHhCCeEEEEEEeccccCCCCCccCCCcchhcccccC-CCCCCCceE
Confidence 4689999999977 666766543 689999999999999999999999999984 33 999999987 455678889
Q ss_pred EEEEEeecCCCCceeEEEEEecCCCceeeeeEEEecCCCCcEEEEecccccCCCCCCcceEEEeCcccCCCCCCHHHHHH
Q 006365 141 YESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRY 220 (648)
Q Consensus 141 y~~~f~~~~~fG~pgAv~v~n~h~~e~fl~~i~l~~~p~g~i~F~CnsWv~~~~~~~~~riff~n~ayLp~~tp~~L~~~ 220 (648)
|+++|+||++||+||||+|+|+|++||||++|+|+++|+|+|||+|||||||+++|+++||||+||+|||++||++|++|
T Consensus 160 y~~~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~g~v~F~cnSWV~p~~~~~~~RiFF~Nk~YLP~~tP~~l~~~ 239 (919)
T PLN02264 160 YTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPGKRIFFTNQPYLPSETPAGLRAL 239 (919)
T ss_pred EEEEEEeccccCCcceEEEEeCCCceEEEEEEEeccCCCCcEEEecCCccccCcCCCCCceEecCCCcCcccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCCCCCccccCeeeeccccCCCCCCCCCCccccccCCCCCCCCCcccCCCCCCCCCCCCccCCCC---CCc
Q 006365 221 RAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREG---NFY 297 (648)
Q Consensus 221 Re~EL~~lRG~g~g~rk~~dRiYdydvYnDlG~Pd~~~~~~rpvlGg~~~PyPRR~RTgR~~~~~dp~~e~r~~---~~y 297 (648)
||+||++|||||+||||+||||||||||||||+||++++++||||||++|||||||||||+|+++||++|||.. .+|
T Consensus 240 Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~dp~~Esr~~~~~~iY 319 (919)
T PLN02264 240 REKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTLGGKKIPYPRRCRTGRLPTDSDMMAESRVEKPLPMY 319 (919)
T ss_pred HHHHHHHhcCCCCCcCCcccchhhhhhhccCCCCCCCccccCcccCCCCCCCCCCCcCCCCCCCCCCcccccccCCCcee
Confidence 99999999999999999999999999999999999999999999999779999999999999999999999954 479
Q ss_pred cCCCCccChhhhccchhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHHHhccCCCCCCccccccccch-hHHHHHHhh
Q 006365 298 VPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL-LPRLVKAIE 376 (648)
Q Consensus 298 vPrDe~F~~~K~~dF~~~~lk~~~~~~lp~l~~~~~~~~~~f~sf~Di~~Ly~~g~~lp~~~~~~~~~~~-~~~i~e~~~ 376 (648)
|||||+|+++|++||+++++|+++|.++|+|+++++.+ +|+||+||++||++|++||.....+..+.+ +|.+.+.++
T Consensus 320 vPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~--~F~~f~~i~~Ly~~g~~l~~~~~~~~~~~~p~~~~~~~~~ 397 (919)
T PLN02264 320 VPRDEQFEESKQDTFAAGRLKAVLHNLIPSLKASILAE--DFANFGEIDSLYKEGLLLKLGFQDDIFKKFPLPKVVTTLQ 397 (919)
T ss_pred CCCCCCcccchhhhHHHHHHHHHHHHhhhhhhhhcCCC--CCCCHHHHHHHHhcCCcCCcchhhhHhhcCChHHHHHHhh
Confidence 99999999999999999999999999999999998754 999999999999999999974211223333 445555558
Q ss_pred ccCCccccccCccccccccccccccHHHHHHHhcCCCccccccccCCCCCCCCCCCcCCCCCCCCcHHHHHHhhCCcccH
Q 006365 377 DTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISV 456 (648)
Q Consensus 377 ~~~~~~lkfp~P~v~~~d~~~W~~DeeFgrQ~LaG~NP~~I~r~~e~P~~s~Ldp~~yG~~~s~It~e~i~~~L~g~~tl 456 (648)
++++.+||||+|++|++|+++|++|+|||||+|||+||++|+||++||++|+|||+.||+++|+||++||++.|+| +||
T Consensus 398 ~~~~~~lkf~~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rl~e~P~~s~ld~~~yg~~~s~it~e~v~~~L~G-~Tl 476 (919)
T PLN02264 398 ESSEGLLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIYGPQHSALTEDHIIGHLDG-LSV 476 (919)
T ss_pred hcccccccCCCCceeecChhhccCHHHHHHHHHcCCCchhhhhhhhcCCCCCCCHhhcCCccchhhHHHHhhccCC-CcH
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHHHhcCcEEEeccCcccCchhhhcccCCCceeeeeeeEEEeCCCCceeeEEEEecCCCCCCCCCcceEEeCCCCCCCch
Q 006365 457 EEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECW 536 (648)
Q Consensus 457 eeal~~grLFi~Dy~d~~lp~l~~in~~~g~~~YAp~~Lffl~~dg~L~PIAIqL~~~~~~~~~~~~~VftP~d~~~~~~ 536 (648)
+|||++|||||+||||++||+++++|.++++++|||+||||++++|+|+||||||+++++++++++++||||+++++++|
T Consensus 477 ~eAl~~~rLFilDy~d~~lp~l~~in~~~g~~~YAprtLFfL~~dG~L~PlAIqL~~p~~~~~~~~~~VftP~~d~~~~w 556 (919)
T PLN02264 477 QQALEENRLFMVDYHDIYLPFLDRINALDGRKAYATRTIFFLTRLGTLKPIAIELSLPPSGPNSRSKRVVTPPVDATSNW 556 (919)
T ss_pred HHHHHcCCEEEEeChhhhhhhhhhhccCCCcEeEcceEEEEECCCCCEeeEEEEecCCCCCCCcCcceeECCCCCCCCch
Confidence 99999999999999999999999999999999999999999999999999999999998776666789999977667889
Q ss_pred hHHHHHHHhhhcchhhHHHHHHhhcccccchhHHHHhccCCCCccchhhhcccchhccccccHHHHhhcccCCceeeccc
Q 006365 537 LWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSF 616 (648)
Q Consensus 537 ~W~LAK~~v~~aD~~~HqlisHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LIn~gGiie~~f 616 (648)
.|+||||||++||++|||+|+||++||++||||||||+||||++|||||||.||||+||+||++||++|||+||++|++|
T Consensus 557 ~W~LAK~~V~~aD~~~HQlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiid~~f 636 (919)
T PLN02264 557 MWQLAKAHVCSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQTLISADGVIESCF 636 (919)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhhhcccCCccCcHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHhccCcccCCCCCchhhhcC
Q 006365 617 SPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648 (648)
Q Consensus 617 ~~G~~~~elss~~Yk~~w~F~~~~LP~DL~~R 648 (648)
++|+|+|||++++|++.|+|++++||+||++|
T Consensus 637 ~pg~~~~elss~aYk~~W~F~~~~LP~DL~~R 668 (919)
T PLN02264 637 TAGQYGMEISAAAYKNSWRFDMEGLPADLIRR 668 (919)
T ss_pred ccchhHHHHHHHHHHhccCCccccCHHHHHHc
Confidence 99999999999999966999999999999998
No 3
>PLN02337 lipoxygenase
Probab=100.00 E-value=7.9e-184 Score=1553.06 Aligned_cols=576 Identities=45% Similarity=0.776 Sum_probs=540.9
Q ss_pred EEEEEEEEEee-cccCcccccccccccchhhhccCCcEEEEEEecccCC-CCC-Ccc----eeccccccccCCCCCCceE
Q 006365 68 IKVKAVVTVKP-TVGGFLSNISLDQGLDDLGDLFGKSLLLELVSAELDP-KTG-LDK----STIQDYARKIGADGDGNMQ 140 (648)
Q Consensus 68 ~~~~~~v~~~~-~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvs~~~~~-~~~-~~~----~~~~~~~~~~~~~~~~~~~ 140 (648)
.+|||+||||+ +++|+++.. ++.+|+++|++||+|+|||||++++| +|| +|| ++|++|+++.+.+.+++++
T Consensus 19 ~~~~~~v~l~~k~~ld~~~~~--~~~lD~~~~l~G~~v~lqLvS~~~~~p~~g~~gk~~k~a~l~~w~~~~~~~~~~~~~ 96 (866)
T PLN02337 19 EKIKGTVVLMKKNVLDFNDFN--ASVLDRVHELLGKGVSLQLISSTVVDPENGLRGKLGKEAYLEKWITTITSLTAGESA 96 (866)
T ss_pred ceEEEEEEEEEecccchhhcc--cchhhhHHHhcCCeEEEEEEeccccccccCCccccCCccchhhhccCCCCCCCCceE
Confidence 38999999966 666776544 69999999999999999999999998 677 433 9999999876666788899
Q ss_pred EEEEEeecCCCCceeEEEEEecCCCceeeeeEEEecCCC-CcEEEEecccccCCCCCCcceEEEeCcccCCCCCCHHHHH
Q 006365 141 YESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKR 219 (648)
Q Consensus 141 y~~~f~~~~~fG~pgAv~v~n~h~~e~fl~~i~l~~~p~-g~i~F~CnsWv~~~~~~~~~riff~n~ayLp~~tp~~L~~ 219 (648)
|+|+|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||.++|+++||||+||+|||++||++|++
T Consensus 97 y~~~F~~~~~fG~pGAi~V~N~h~~EffL~sitle~~p~~g~v~f~cnSWV~~~~~~~~~RiFF~nk~ylp~~tP~~l~~ 176 (866)
T PLN02337 97 FKVTFDWDEKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWIYPAKRYRYDRVFFSNKTYLPSQTPAPLRP 176 (866)
T ss_pred EEEEEEecccCCCcceEEEEecCCceEEEEEEEEecCCCCCcEEEecCCccccCCCCCCCceEecCCCcCcccccHHHHH
Confidence 999999999999999999999999999999999999994 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhCCCCCCccccCeeeeccccCCCCCCCCCCccccccCCC-CCCCCCcccCCCCCCCCCCCCccCCCC----
Q 006365 220 YRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREG---- 294 (648)
Q Consensus 220 ~Re~EL~~lRG~g~g~rk~~dRiYdydvYnDlG~Pd~~~~~~rpvlGg-~~~PyPRR~RTgR~~~~~dp~~e~r~~---- 294 (648)
|||+||++|||||+||||+||||||||||||||+||++++++|||||| ++|||||||||||+|+++||++|||..
T Consensus 177 ~R~~eL~~lrG~g~gerk~~dRiYdyd~YnDlg~pd~~~~~~RpvLGg~~~~pyPRR~rTgr~~t~~dp~~esr~~~~~~ 256 (866)
T PLN02337 177 YREEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSESRLPLLSL 256 (866)
T ss_pred HHHHHHHHhcCCCCCCCCcccchhhhhhhccCCCCCCCccccCccCCCCCCCCCCCcccCCCCCCCCCCccccccccCCC
Confidence 999999999999999999999999999999999999999999999999 679999999999999999999999953
Q ss_pred CCccCCCCccChhhhccchhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHHHhccCCCCCCccccccccch--hHHHH
Q 006365 295 NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL--LPRLV 372 (648)
Q Consensus 295 ~~yvPrDe~F~~~K~~dF~~~~lk~~~~~~lp~l~~~~~~~~~~f~sf~Di~~Ly~~g~~lp~~~~~~~~~~~--~~~i~ 372 (648)
.+||||||+|+++|++||+++++||++|.++|+|+++++.+..+|++|+||++||++|++||..+.++.++.. ++.++
T Consensus 257 ~~yvPrDE~f~~~k~~~f~~~~l~~~~~~~~p~~~~~~~~~~~~f~~f~~i~~ly~~g~~lp~~~~~~~~~~~~p~~~~~ 336 (866)
T PLN02337 257 NIYVPRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDSFEDVLKLYEGGIKLPNGPLLEELRKNIPLEMLK 336 (866)
T ss_pred CcccCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhhcCCCCCCchHHHHhhhcChHHHHH
Confidence 4799999999999999999999999999999999999988889999999999999999999985433334443 44577
Q ss_pred HHhhccCCccccccCccccccccccccccHHHHHHHhcCCCccccccccCCCCCCCCCCCcCCCCCCCCcHHHHHHhhCC
Q 006365 373 KAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGG 452 (648)
Q Consensus 373 e~~~~~~~~~lkfp~P~v~~~d~~~W~~DeeFgrQ~LaG~NP~~I~r~~e~P~~s~Ldp~~yG~~~s~It~e~i~~~L~g 452 (648)
+.++++++.++|||+|+||++|+++|++|+|||||||||+||++|+||++||++|+|||++||+++|+||++||++.|+|
T Consensus 337 ~~~~~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~rl~~~P~~~~ld~~~yg~~~s~iT~e~v~~~L~g 416 (866)
T PLN02337 337 ELLRTDGEYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGDQNSSITEEHIEKNLEG 416 (866)
T ss_pred HHHhhcccccccCCCCceeecccccccCHHHHHHHHhcCCCChheeecccCCCcccCChhhcCCccCccCHHHHHhccCC
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cccHHHHHhcCcEEEeccCcccCchhhhcccCCCceeeeeeeEEEeCCCCceeeEEEEecCCCCCCC--CCcceEEeCCC
Q 006365 453 MISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGK--PQWKQVFLPSW 530 (648)
Q Consensus 453 ~~tleeal~~grLFi~Dy~d~~lp~l~~in~~~g~~~YAp~~Lffl~~dg~L~PIAIqL~~~~~~~~--~~~~~VftP~d 530 (648)
+||+|||++|||||+||||++|||+.++|...++ .|||+||||++++|+|+||||||++|+..++ ++.++||||++
T Consensus 417 -~Tl~eAl~~~rLfi~Dy~d~~lp~l~~in~~~~k-~yA~~tLffl~~dG~L~PlAIqL~~p~~~~~~~g~~~~VfTP~~ 494 (866)
T PLN02337 417 -LTVQEALEKNRLFILDHHDALMPYLRRINSTSTK-TYATRTLLFLKDDGTLKPLAIELSLPHPQGDKFGAVSKVYTPAE 494 (866)
T ss_pred -ccHHHHHHcCCEEEEecchhcCcccccccCCCCc-cccceeEEEECCCCCEeEEEEEeccCCCCcccCCCCCCeECCCC
Confidence 9999999999999999999999999999986554 9999999999999999999999998865433 45789999998
Q ss_pred CCCCchhHHHHHHHhhhcchhhHHHHHHhhcccccchhHHHHhccCCCCccchhhhcccchhccccccHHHHhhcccCCc
Q 006365 531 HSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADG 610 (648)
Q Consensus 531 ~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LIn~gG 610 (648)
+++++|.|+||||||++||++|||+|+||++||++||||||||+||||++|||||||+||||+||+||++||++|||+||
T Consensus 495 ~~~~~~~W~lAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gG 574 (866)
T PLN02337 495 DGVEGSVWQLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQILINAGG 574 (866)
T ss_pred CCCCcchHHHHHHHHHHhhHHHHHHHHHHhhhhhhHHHHHHHHhccCCCcCcHHHHHHHHHHHHHHHHHHHHHheeCCCC
Confidence 77779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChhHHHHHHHHhccCcccCCCCCchhhhcC
Q 006365 611 IIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648 (648)
Q Consensus 611 iie~~f~~G~~~~elss~~Yk~~w~F~~~~LP~DL~~R 648 (648)
++|++|++|+|+|||++++|++ |+|++++||+||++|
T Consensus 575 iid~~~~~g~~~~els~~~yk~-w~F~~~~LP~DL~~R 611 (866)
T PLN02337 575 ILESTVFPGKYALEMSSVVYKN-WNFTEQALPADLIKR 611 (866)
T ss_pred eeeeeeccchhHHHHHHHHHhc-CCcccccCHHHHHHc
Confidence 9999999999999999999999 999999999999998
No 4
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents the C-terminal region of these proteins.; GO: 0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 2P0M_A 3RDE_B 2IUJ_A 1RRL_B 1JNQ_A ....
Probab=100.00 E-value=7.4e-136 Score=1155.59 Aligned_cols=428 Identities=60% Similarity=1.023 Sum_probs=365.3
Q ss_pred CHHHHHHHHHHHHhhhCCCCCCccccCeeeeccccCCCCCCCCCCccccccCCC-CCCCCCcccCCCCCCCCCCCCccCC
Q 006365 214 PDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKR 292 (648)
Q Consensus 214 p~~L~~~Re~EL~~lRG~g~g~rk~~dRiYdydvYnDlG~Pd~~~~~~rpvlGg-~~~PyPRR~RTgR~~~~~dp~~e~r 292 (648)
|++|+++||+||++|||||+||||+||||||||||||||+||++++++|||||| ++|||||||||||+|+++||.+|+|
T Consensus 1 ~~~l~~~R~~eL~~lrG~g~gerk~~dRiYdYd~YnDLG~pd~~~~~~RpvlGgs~~~PYPRR~RTGr~~~~~Dp~sEsr 80 (667)
T PF00305_consen 1 PAGLKKLREEELKNLRGDGTGERKEWDRIYDYDVYNDLGNPDKGPELARPVLGGSKEFPYPRRCRTGRPPTKTDPKSESR 80 (667)
T ss_dssp SGGGHHHHHHHHHHHHTTS-S---TT-----EE-B-SSSBGGGTGCG----BSSSSSS----EE----SBESSCTTSBGC
T ss_pred ChHHHHHHHHHHHHhcCCCCCccccccceeeeecccCCCCCCCCCcCCCCCCCCCCCCCCCccCCCCCCCCCCCccccCc
Confidence 789999999999999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred CCCCccCCCCccChhhhccchhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHHHhccCCCCCCccccccccch--hHH
Q 006365 293 EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL--LPR 370 (648)
Q Consensus 293 ~~~~yvPrDe~F~~~K~~dF~~~~lk~~~~~~lp~l~~~~~~~~~~f~sf~Di~~Ly~~g~~lp~~~~~~~~~~~--~~~ 370 (648)
...+||||||+|+++|++||.++++|+++|.++|.|+++++.+..+|+||+||++||++|++||.. ..+.. ++.
T Consensus 81 ~~~~YVPRDE~F~~~K~~dF~~~~lks~~~~llP~L~~~~~~~~~eF~sF~dId~LY~~g~~l~~~----~~~~~~~~~~ 156 (667)
T PF00305_consen 81 SGDIYVPRDERFSEVKQSDFLANALKSLLHALLPALKSLFDDTPNEFDSFEDIDDLYEEGIKLPTD----LLKKLIPLEL 156 (667)
T ss_dssp -SSGGS-GGGS-SCSSGGGHHHHHHHHHHHTHHHHHHHHTTSSTSSCSSHHHHHHHHTTTEE--HH----HHCCHTTSTT
T ss_pred cccccCCccccccchhHHHHHHHHHHHHHHhHHHHHHHHhcccCcccCCHHHHHHHHhccccchhh----HhhhcCcHHH
Confidence 889999999999999999999999999999999999999877889999999999999999998831 11222 345
Q ss_pred HHHHhhccCCccccccCccccccccccccccHHHHHHHhcCCCccccccccCCCCCCCCCCCcCCCCCCCCcHHHHHHhh
Q 006365 371 LVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEI 450 (648)
Q Consensus 371 i~e~~~~~~~~~lkfp~P~v~~~d~~~W~~DeeFgrQ~LaG~NP~~I~r~~e~P~~s~Ldp~~yG~~~s~It~e~i~~~L 450 (648)
+.+.+.++++.++|||+|+|++.++++|++|+|||||+|||+||++|+||+++|++++|||++||+++|+||++||+..|
T Consensus 157 ~~~~~~~~~~~~~kf~~p~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ld~~~yg~~~s~it~e~i~~~l 236 (667)
T PF00305_consen 157 LKELFRTDGENILKFPTPQVIERDRFAWRTDEEFARQRLAGVNPVVIRRLTEFPPKSKLDPAIYGDQESPITDEHIEPQL 236 (667)
T ss_dssp CCTTSBETSSSEEB----HHHHCHHHHTTSHHHHHHHHHHSSSTTSEEE-SSSSTTS-SSHHCCTSSB-STTHHHHHHHC
T ss_pred HHHHHhhcccceeeCCCCccchhhhhccCChHHHHHHHHcCCCchHhhccccCCccccccHhhcCCccCCchHHHhhhcc
Confidence 77788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccHHHHHhcCcEEEeccCcccCchhhhcccCCCceeeeeeeEEEeCCCCceeeEEEEecCCCCCCCCCcceEEeCCC
Q 006365 451 GGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSW 530 (648)
Q Consensus 451 ~g~~tleeal~~grLFi~Dy~d~~lp~l~~in~~~g~~~YAp~~Lffl~~dg~L~PIAIqL~~~~~~~~~~~~~VftP~d 530 (648)
+| +||++||++|||||+|||++.+|++.++|. ++++.|||+||||++++|+|+||||||++|+..+.++.++||||++
T Consensus 237 ~g-~tl~~al~~~rLfi~Dy~~~~~~~~~~i~~-~~~~~~A~~~Lf~l~~~g~L~PlAIqL~~p~~~~~~~~~~v~tP~~ 314 (667)
T PF00305_consen 237 EG-LTLEEALKDGRLFILDYHDLFGPYLNKINE-KGRYAYAPRALFFLNPDGTLKPLAIQLSQPGPEGPPQFNPVFTPSD 314 (667)
T ss_dssp HC-S-HHHHHHTT-EEEEEEGGGTTHHHHHHTT-CCGBG-EEEEEEEEETTSEEEEEEEECSECBTTCS-EEEEEE-TTS
T ss_pred CC-CcHHHHHhcCCeEEEeehhhcccccccccc-CCcEeccceeEEEEcCCCCEeeeEEeccCCCCcccCccceeeecCC
Confidence 99 999999999999999999999999999998 7899999999999999999999999998876554456789999996
Q ss_pred CCCCchhHHHHHHHhhhcchhhHHHHHHhhcccccchhHHHHhccCCCCccchhhhcccchhccccccHHHHhhcccCCc
Q 006365 531 HSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADG 610 (648)
Q Consensus 531 ~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LIn~gG 610 (648)
+++.+|.|+||||||++||+++||+|+||++||+|||||||||+||||.+|||||||.||||+||+||++||++|||+||
T Consensus 315 d~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Ep~~vAt~R~Ls~~HPi~kLL~PH~r~tl~IN~~Ar~~Li~~gG 394 (667)
T PF00305_consen 315 DGTEDWLWLLAKAHVQVADANYHQLISHLLRTHLVMEPFIVATHRQLSEMHPIYKLLHPHFRYTLAINALARQSLINAGG 394 (667)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHS-TTSHHHHHHGGGGTTHHHHHHHHHHHTSSTTS
T ss_pred CCccchHHHHHHHHHHhhhHHHHHHHhhhhhhhhhhHHHHHHHhcCCCCCCCceeeccceeecchhhhHHHHHHhhccCc
Confidence 55667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChhHHHHHHHHhccCcccCCCCCchhhhcC
Q 006365 611 IIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISR 648 (648)
Q Consensus 611 iie~~f~~G~~~~elss~~Yk~~w~F~~~~LP~DL~~R 648 (648)
+||++|++|+++|+|++++|++ |+|++++||+||++|
T Consensus 395 ~id~~~~~g~~~~~l~~~~y~~-~~f~~~~lP~dL~~R 431 (667)
T PF00305_consen 395 IIDKTFSPGKYGMELSSRAYKN-WRFDDQALPADLKKR 431 (667)
T ss_dssp HHHHHSTTTTTHHHHHHHHHTT---GGGGSHHHHHHHT
T ss_pred ccccccchhhHHHHHHHHHHhh-CCcccccCHHHHHhh
Confidence 9999999999999999999999 999999999999998
No 5
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=100.00 E-value=9.3e-40 Score=306.52 Aligned_cols=131 Identities=51% Similarity=0.873 Sum_probs=118.0
Q ss_pred EEEEEEEEEee-cccCcccccccccccchhhhccCCcEEEEEEecccCCCCCCcc----eeccccccccCCCCCCceEEE
Q 006365 68 IKVKAVVTVKP-TVGGFLSNISLDQGLDDLGDLFGKSLLLELVSAELDPKTGLDK----STIQDYARKIGADGDGNMQYE 142 (648)
Q Consensus 68 ~~~~~~v~~~~-~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvs~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~y~ 142 (648)
++|||+|+||+ +++++++ .. +.+|+++|++||+|+||||||+++|+||+|| ++|++|.++. ++++.|+
T Consensus 1 ~~vka~V~v~~k~~~~~~~-~~--~~~D~~~~llGk~v~lqLVSs~~d~~tg~~k~~~~~~l~~~~~~~----~~e~~y~ 73 (137)
T cd01751 1 VKVKATVTVMKKNKLDLND-DG--SGLDDLDDLLGRSLLLELVSSELDPKTGKGKKGKAAFLEGWGKSL----AGESAYE 73 (137)
T ss_pred CEEEEEEEEEEeecccccc-cc--chhhhHHHhhCCeEEEEEEEeeecCCCCCcccccceeeecccccC----CcceEEE
Confidence 37999999977 5555543 22 7899999999999999999999999999655 9999998653 6678999
Q ss_pred EEEeecCCCCceeEEEEEecCCCceeeeeEEEecCCC-CcEEEEecccccCCCCCCcceEEEeC
Q 006365 143 SEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTN 205 (648)
Q Consensus 143 ~~f~~~~~fG~pgAv~v~n~h~~e~fl~~i~l~~~p~-g~i~F~CnsWv~~~~~~~~~riff~n 205 (648)
++|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||+++|+++||||+|
T Consensus 74 ~~F~v~~~fG~pGAi~V~N~h~~EffLksitLe~~p~~g~v~F~CNSWVyp~~~~~~~RiFFsN 137 (137)
T cd01751 74 AEFEVPASFGPPGAVLVKNEHHSEFFLKSITLEGFGGSGTITFVCNSWVYPKKDYPDKRIFFPN 137 (137)
T ss_pred EEEEeecccCCccEEEEEECCCceEEEEEEEEeCCCCCccEEEEccccCccCCCCCCCCEEccC
Confidence 9999999999999999999999999999999999995 99999999999999999999999997
No 6
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain.
Probab=99.26 E-value=2.7e-11 Score=107.88 Aligned_cols=83 Identities=39% Similarity=0.626 Sum_probs=64.6
Q ss_pred cEEEEEEecccCCCCCCc-ceeccccccccCCCCCCceEEEEEEeecCCCCceeEEEEEecC-CCceeeeeEEEecCCCC
Q 006365 103 SLLLELVSAELDPKTGLD-KSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH-HKEMYLKDIVLDGLPNG 180 (648)
Q Consensus 103 ~v~lqLvs~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~y~~~f~~~~~fG~pgAv~v~n~h-~~e~fl~~i~l~~~p~g 180 (648)
+|.|+|++++.+ +|.. ...++.|. ...+ ..|++.|+++.++|++++|.|.|.+ +.+|||++|+|++.+.|
T Consensus 20 ~V~l~L~g~~~~--s~~~~~~~~~~~~-----f~~g-~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l~~V~V~~~~~~ 91 (105)
T smart00308 20 SVSLSLVGAEGD--GKESKLDYLFKGI-----FARG-STYEFTFDVDEDFGELGAVKIKNEHRHPEWFLKSITVKDLPTG 91 (105)
T ss_pred eEEEEEEeCCCC--CcceeccccCCcc-----ccCC-ceEEEEEecccCCCCcEEEEEEeCCCCCCeEEEEEEEEECCCC
Confidence 599999997764 2321 13344432 2334 5788899999999999999999999 89999999999876654
Q ss_pred -cEEEEecccccCC
Q 006365 181 -PVNVTCNSWLHSK 193 (648)
Q Consensus 181 -~i~F~CnsWv~~~ 193 (648)
.++|+||+||++.
T Consensus 92 ~~~~F~c~~Wl~~~ 105 (105)
T smart00308 92 GKYHFPCNSWVYPD 105 (105)
T ss_pred CEEEEEcCceeCCC
Confidence 8999999999863
No 7
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....
Probab=98.89 E-value=6e-09 Score=92.98 Aligned_cols=65 Identities=31% Similarity=0.565 Sum_probs=58.5
Q ss_pred eEEEEEEeecCCCCceeEEEEEec---CCCceeeeeEEEecCCCC-cEEEEecccccCCCCCCcceEEE
Q 006365 139 MQYESEFEVPSGFGEIGAILVENE---HHKEMYLKDIVLDGLPNG-PVNVTCNSWLHSKHDNKQKRVFF 203 (648)
Q Consensus 139 ~~y~~~f~~~~~fG~pgAv~v~n~---h~~e~fl~~i~l~~~p~g-~i~F~CnsWv~~~~~~~~~riff 203 (648)
...++.|+.+.++|++.+|.|.+. +...|||++|+|...+.| ...|+||+||....+++.+||||
T Consensus 45 ~~d~F~i~~~~~lG~i~~i~i~~~~~~~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~rvf~ 113 (113)
T PF01477_consen 45 STDTFTIETPEDLGEIQKIRIWHDGSGPSPSWYLDSVVVTDGETGRTYTFPCNRWLDPDKDYKTERVFF 113 (113)
T ss_dssp EEEEEEEEESSCGCSEEEEEEEEESSSSSSEEEEEEEEEEETTTSEEEEEEEEEEESTTEGCSSEEEEE
T ss_pred ceEEeeeeecccCCCCcEEEEEEccCCCccceEEEEEEEEeCCCCcEEEEEcCCEECCCCCCCCccEEC
Confidence 567777778889999999999998 788999999999876655 89999999999999999999998
No 8
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=98.70 E-value=1.4e-07 Score=85.43 Aligned_cols=91 Identities=14% Similarity=0.218 Sum_probs=67.3
Q ss_pred CcEEEEEEecccCCCCCC-cceecc-ccccccCCCCCCceEEEEEEeecCCCCceeEEEEEecCCC---ceeeeeEEEec
Q 006365 102 KSLLLELVSAELDPKTGL-DKSTIQ-DYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHK---EMYLKDIVLDG 176 (648)
Q Consensus 102 ~~v~lqLvs~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~y~~~f~~~~~fG~pgAv~v~n~h~~---e~fl~~i~l~~ 176 (648)
.+|.|+|+.+. |. ....+. ++. ....+ ..+++.|+++.++|++.+|.|.+.+.. +|||++|+|.+
T Consensus 19 ~~v~i~l~g~~-----g~s~~~~l~~~~~----~f~~g-~~~~f~v~~~~~lG~i~~v~l~~d~~g~~~~W~l~~V~V~~ 88 (116)
T cd00113 19 SNISLALYGEN-----GNSSDIPILDGPG----SFERG-STDTFQIDLKLDIGDITKVYLRRDGSGLSDGWYCESITVQA 88 (116)
T ss_pred CEEEEEEEeCC-----CCcccEEccCCCC----cccCC-CceEEEEeccCCCcCeEEEEEEECCCCCCCCEEEeEEEEEe
Confidence 45889998642 21 112222 111 13334 466677778899999999999998865 99999999987
Q ss_pred CCCC-cEEEEecccccCCCCCCcceEE
Q 006365 177 LPNG-PVNVTCNSWLHSKHDNKQKRVF 202 (648)
Q Consensus 177 ~p~g-~i~F~CnsWv~~~~~~~~~rif 202 (648)
...| .++|+||+||.....++..|+|
T Consensus 89 ~~~~~~~~F~~~~Wl~~~~~~~~~r~~ 115 (116)
T cd00113 89 LGTKKVYTFPVNRWVLGGKWYTSVRSL 115 (116)
T ss_pred CCCCCEEEEEeCCCcccCCCCCceeec
Confidence 6654 8999999999999888888886
No 9
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=98.24 E-value=5.2e-06 Score=76.11 Aligned_cols=77 Identities=16% Similarity=0.343 Sum_probs=54.3
Q ss_pred cEEEEEEecccCCCCCCcceeccccccccCCCCCC-ceEEEEEEeecCCCCceeEEEEEecC-CCceeeeeEEEecCCCC
Q 006365 103 SLLLELVSAELDPKTGLDKSTIQDYARKIGADGDG-NMQYESEFEVPSGFGEIGAILVENEH-HKEMYLKDIVLDGLPNG 180 (648)
Q Consensus 103 ~v~lqLvs~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~f~~~~~fG~pgAv~v~n~h-~~e~fl~~i~l~~~p~g 180 (648)
+|.|+||-++- .++ +..|.+ ....| ...|. |. ++++|++-.|.|.|.. .+.|||+.|+|++ |.|
T Consensus 20 ~V~i~L~G~~g--~S~--~~~L~~------~F~~G~~d~F~--v~-~~dLG~l~~i~l~n~g~~~~Wf~~~V~V~~-~~g 85 (109)
T cd02899 20 TIEITLLGSSG--RSN--PKTLSQ------GFYPGSLKRIR--FR-AADVGDINAIILSNTALNDPWYCDYVRIKS-EDG 85 (109)
T ss_pred eEEEEEEECCC--CcC--CEEccC------ccCCCceEEEE--EC-ccccCceEEEEEECCCCCCCceeeEEEEEC-CCC
Confidence 48899997532 222 222332 23333 23454 44 8999999999998876 6689999999986 866
Q ss_pred -cEEEEecccccCC
Q 006365 181 -PVNVTCNSWLHSK 193 (648)
Q Consensus 181 -~i~F~CnsWv~~~ 193 (648)
..+||||+|+..-
T Consensus 86 ~~~~Fpc~rWla~~ 99 (109)
T cd02899 86 KVFAFNVKRWIGYP 99 (109)
T ss_pred CEEEEEcceeeCCc
Confidence 7889999999643
No 10
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.82 E-value=0.00025 Score=65.35 Aligned_cols=94 Identities=15% Similarity=0.325 Sum_probs=60.0
Q ss_pred cEEEEEEecccCCCCCCcceeccccccccCCCCCCceEEEEEEeecCCCCceeEEEEEecC---CCceeeeeEEEecCCC
Q 006365 103 SLLLELVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLPN 179 (648)
Q Consensus 103 ~v~lqLvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~f~~~~~fG~pgAv~v~n~h---~~e~fl~~i~l~~~p~ 179 (648)
+|.++|+-+.- . .+.-.|..+ ........| +..++.++. .++|.+-.|.|.... ...|||+.|+|.+...
T Consensus 20 ~V~i~L~G~~g--~--s~~~~L~~~-~~~~~FerG-s~d~F~i~~-~~lG~l~~i~i~~d~~g~~~~W~~~~V~V~~~~~ 92 (120)
T cd01756 20 NVFITLYGENG--D--TGKRKLKKS-NNKNKFERG-QTDKFTVEA-VDLGKLKKIRIGHDNSGLGAGWFLDKVEIREPGT 92 (120)
T ss_pred EEEEEEEeCCC--c--cccEEccCC-CcCCcccCC-CeEEEEEEe-cCCCCeEEEEEEECCCCCCCCcEEeEEEEEECCC
Confidence 47888875321 1 233445543 111233444 233344446 899999999998765 4689999999986444
Q ss_pred C-cEEEEecccccCCCCC-CcceEEE
Q 006365 180 G-PVNVTCNSWLHSKHDN-KQKRVFF 203 (648)
Q Consensus 180 g-~i~F~CnsWv~~~~~~-~~~riff 203 (648)
| ..+||||+|+...+.. .-.|++.
T Consensus 93 ~~~~~F~~~~Wl~~~~~dg~~~r~~~ 118 (120)
T cd01756 93 GDEYTFPCNRWLDKDEDDGQIVRELY 118 (120)
T ss_pred ceEEEEEeCCccCCCCCCCEEEEEEE
Confidence 5 7889999999887542 1245543
No 11
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Probab=97.80 E-value=0.00015 Score=66.60 Aligned_cols=83 Identities=19% Similarity=0.380 Sum_probs=56.7
Q ss_pred cEEEEEEecccCCCCCCcceeccccccccCCCCCCceEEEEEEeecCCCCceeEEEEEecC---CCceeeeeEEEecCCC
Q 006365 103 SLLLELVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLPN 179 (648)
Q Consensus 103 ~v~lqLvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~f~~~~~fG~pgAv~v~n~h---~~e~fl~~i~l~~~p~ 179 (648)
+|.|+|+-++-+ + +.-.|..... ....+ ...++.+.++.++|++-.|.|.... ...|||+.|+|++ ++
T Consensus 20 ~V~i~l~G~~g~--S--~~~~L~~~~~---~FerG-~~d~F~v~~~~~lG~l~~i~i~~d~~g~~~~W~l~~V~V~~-~~ 90 (113)
T cd01753 20 YIYLTLVGTAGE--S--EKQLLDRPGY---DFERG-AVDEYKVKVPEDLGELLLVRLRKRKYLLFDAWFCNYITVTG-PG 90 (113)
T ss_pred EEEEEEEECCCc--c--cCEEcCCCCC---ccCCC-CeeEEEEecccCCCCcEEEEEEECCCCCCCCeeecEEEEEc-CC
Confidence 488888864432 2 2223332211 23334 3445555588999999999998765 6799999999986 44
Q ss_pred C-cEEEEecccccCCC
Q 006365 180 G-PVNVTCNSWLHSKH 194 (648)
Q Consensus 180 g-~i~F~CnsWv~~~~ 194 (648)
| ..+||||+|+....
T Consensus 91 ~~~~~F~c~rWl~~~~ 106 (113)
T cd01753 91 GDEYHFPCYRWIEGYG 106 (113)
T ss_pred CCEEEEEhHHeECCCC
Confidence 6 78899999997764
No 12
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=97.54 E-value=0.00073 Score=62.40 Aligned_cols=86 Identities=20% Similarity=0.352 Sum_probs=57.9
Q ss_pred cEEEEEEecccCCCCCCcceeccccccccCCCCCCceEEEEEEeecCCCCceeEEEEEecC---CCceeeeeEEEecCCC
Q 006365 103 SLLLELVSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLPN 179 (648)
Q Consensus 103 ~v~lqLvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~f~~~~~fG~pgAv~v~n~h---~~e~fl~~i~l~~~p~ 179 (648)
+|.++|+.+.-+ + ++-.|.+... .....| ..+++.+..+.++|.+-.|.|.... ...|||++|+|.+.-.
T Consensus 20 ~V~i~L~G~~g~--s--~~~~L~~~~~--~~F~rG-~~~~f~i~~~~dlG~l~~i~l~hd~~g~~~~W~l~~V~V~~~~t 92 (120)
T cd01752 20 KVTITLYGAEGE--S--EPHHLRDPEK--PIFERG-SVDSFLLTTPFPLGELQSIRLWHDNSGLSPSWYLSRVIVRDLQT 92 (120)
T ss_pred EEEEEEEeCCCC--c--ccEEcCCCCc--cceeCC-CeeEEEecCccCCCCccEEEEEECCCCCCCCeEEEEEEEEECCC
Confidence 488888864321 1 2233332211 233444 4566666678899999999996544 5699999999986444
Q ss_pred C-cEEEEecccccCCCC
Q 006365 180 G-PVNVTCNSWLHSKHD 195 (648)
Q Consensus 180 g-~i~F~CnsWv~~~~~ 195 (648)
| ...||||+|+...+.
T Consensus 93 ~~~~~F~~~rWl~~~~~ 109 (120)
T cd01752 93 GKKWFFLCNDWLSVEEG 109 (120)
T ss_pred CcEEEEEeCcEECCcCC
Confidence 5 789999999987654
No 13
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Probab=97.51 E-value=0.00027 Score=65.42 Aligned_cols=54 Identities=15% Similarity=0.434 Sum_probs=43.5
Q ss_pred EEEEEeecCCCCceeEEEEEecC---CCceeeeeEEEecCCCC-cEEEEecccccCCCC
Q 006365 141 YESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLPNG-PVNVTCNSWLHSKHD 195 (648)
Q Consensus 141 y~~~f~~~~~fG~pgAv~v~n~h---~~e~fl~~i~l~~~p~g-~i~F~CnsWv~~~~~ 195 (648)
|++.++. .++|..-.|.|.... ...|||+.|+|++.+.| ..+||||+|+--.+.
T Consensus 43 f~~~v~~-~~LG~L~~irIwHDnsG~~~~Wfl~~V~V~d~~t~~~~~FpC~rWLa~~~~ 100 (114)
T cd01757 43 LEMTFDC-QNLGKLTTVQIGHDNSGLLAKWLVEYVMVRNEITGHTYKFPCGRWLGEGVD 100 (114)
T ss_pred eEEEEec-CCcCCcEEEEEEECCCCCCCCeeeeEEEEEeCCCCCEEEEecCceecCCCC
Confidence 4444333 999999999998755 67999999999987766 799999999977654
No 14
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.08 E-value=0.0013 Score=62.08 Aligned_cols=55 Identities=9% Similarity=0.135 Sum_probs=43.4
Q ss_pred eEEEEEEeecCCCCceeEEEEEecC---CCceeeeeEEEecCCC---C-cEEEEecccccCCCC
Q 006365 139 MQYESEFEVPSGFGEIGAILVENEH---HKEMYLKDIVLDGLPN---G-PVNVTCNSWLHSKHD 195 (648)
Q Consensus 139 ~~y~~~f~~~~~fG~pgAv~v~n~h---~~e~fl~~i~l~~~p~---g-~i~F~CnsWv~~~~~ 195 (648)
..|.|+ .+.++|++-.|.|.... ...|||..|+|++... + ..+||||+|+...+.
T Consensus 58 d~F~v~--~~~~lG~l~~irI~HDn~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~~ 119 (129)
T cd01754 58 DRFSGR--GPCLPSPPCWMNLTSDGTGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDES 119 (129)
T ss_pred cEEEEE--eccCCCCeEEEEEEECCCCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCCCC
Confidence 356655 77889999999998644 6799999999987542 2 689999999976654
No 15
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=41.44 E-value=1.3e+02 Score=27.99 Aligned_cols=50 Identities=10% Similarity=0.128 Sum_probs=39.8
Q ss_pred eEEEEEEeecCCCCceeEEEEEecC----------CCceeeeeEEEecCCCCcEEEEecc
Q 006365 139 MQYESEFEVPSGFGEIGAILVENEH----------HKEMYLKDIVLDGLPNGPVNVTCNS 188 (648)
Q Consensus 139 ~~y~~~f~~~~~fG~pgAv~v~n~h----------~~e~fl~~i~l~~~p~g~i~F~Cns 188 (648)
..|++-+..+.++|..-.|.+.=+. ...||++.|+|++...+.-..-|.+
T Consensus 46 ~~~sfli~t~~~lG~l~~v~~~~dn~~~~~~~~~~~p~~~~~~I~Vq~get~~~~~FC~~ 105 (120)
T cd01755 46 KTYSFLIDTEVDIGDLLKVKFKWENNVINSNSGETLPKLGARKIRVKSGETQKKFTFCSQ 105 (120)
T ss_pred CEEEEEEEcCCCccceEEEEEEEcCCCcccccccCCCcEEEEEEEEEECCCCCEEEEECC
Confidence 6788888899999999988885322 3589999999987676766677877
No 16
>KOG2080 consensus Uncharacterized conserved protein, contains DENN and RUN domains [Signal transduction mechanisms]
Probab=38.67 E-value=27 Score=42.49 Aligned_cols=54 Identities=13% Similarity=0.385 Sum_probs=38.1
Q ss_pred EEEEEeecCCCCceeEEEEEec---CCCceeeeeEEEecCCCC-cEEEEecccccCCCC
Q 006365 141 YESEFEVPSGFGEIGAILVENE---HHKEMYLKDIVLDGLPNG-PVNVTCNSWLHSKHD 195 (648)
Q Consensus 141 y~~~f~~~~~fG~pgAv~v~n~---h~~e~fl~~i~l~~~p~g-~i~F~CnsWv~~~~~ 195 (648)
-+++|+. +++|..--+.|--. ....||++.|.|..-=.| ++-|||++|.-+..+
T Consensus 1013 ~~f~F~~-kNLG~LtT~rIGHdnS~~~~kW~vEyV~vRNEiTG~TYKFPCGrw~G~ged 1070 (1295)
T KOG2080|consen 1013 PLFKFDH-KNLGILSTLRIGHQQSEKPVQWFLEYVLVRNEITGQTYKFPCGRWFGNGED 1070 (1295)
T ss_pred ceeEEec-cccceeeeEEecccCCCcchHHHHHHhhhhceeccceeccccccccCCccc
Confidence 4455554 88999988888432 256899999877431145 899999999866543
Done!