BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006368
(648 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZTS1|SYM_ORYSJ Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica
GN=Os06g0508700 PE=2 SV=2
Length = 801
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/601 (79%), Positives = 539/601 (89%), Gaps = 2/601 (0%)
Query: 20 GKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETK 79
G+RNIL+TSALPYVNNVPHLGNIIG VLSADVFAR+CRLRGYN IYICGTDEYGTATETK
Sbjct: 14 GRRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYICGTDEYGTATETK 73
Query: 80 AMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIE 139
AME+ CSPKEICDKYH +H +VYKWFDI FD FGRTS+PQQTE CQAIF+KL++NNWL E
Sbjct: 74 AMEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTE 133
Query: 140 NTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCR 199
NTMQQ YCDTC+RFLADRLVEG CP EGCNYE+ARGDQCENC KLLN T+L DPKCKVC+
Sbjct: 134 NTMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCK 193
Query: 200 NAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDL 259
N P++RDT+HLFL+LP L +KL YIN SVAG WSQNAIQAT+AWLKEGLK RCITRDL
Sbjct: 194 NTPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRDL 253
Query: 260 KWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPF 319
KWGVPVP E++K+KVFYVWFDAPIGYVSIT+ YT +WE+WWK+P+NVEL+QFMGKDNVPF
Sbjct: 254 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPDWEKWWKDPDNVELFQFMGKDNVPF 313
Query: 320 HTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRY 379
HTVMFPSTLLGTGE WT+MKTISVTEYLNYE+GKFSKS GIGVFGNDAKDTNIP EVWRY
Sbjct: 314 HTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEVWRY 373
Query: 380 YLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGA 439
YLLTNRPEVSDTLFTWADLQAK N+ELLNNLGNFINRVLSF+AKP G GY SIVPDA A
Sbjct: 374 YLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSIVPDAPNA 433
Query: 440 ESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQ 499
ESH LTK L EK K+VEQYLEAMEKVKLKQGLK+AM ISS+GNAYLQESQFWKLYKED
Sbjct: 434 ESHPLTKALVEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFWKLYKEDP 493
Query: 500 PSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRPW 559
+C++VM+TSVG+V+LLACLLEPFMPSFS EV QLN+ PE+ +S CD+KG++ +A+RPW
Sbjct: 494 AACAVVMKTSVGVVYLLACLLEPFMPSFSNEVLLQLNMTPEESLSFCDDKGEIAKAKRPW 553
Query: 560 EIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAE--AEAAKTAEQLKKTKI 617
+ + AGHKIG P+PLFKELKD+EVE FR+KFAGSQA+R +A+ AEA K A++LK TK+
Sbjct: 554 DFVSAGHKIGKPSPLFKELKDEEVESFRNKFAGSQAERSSKAQADAEAKKVADKLKGTKL 613
Query: 618 S 618
S
Sbjct: 614 S 614
>sp|Q9SVN5|SYM_ARATH Probable methionine--tRNA ligase OS=Arabidopsis thaliana
GN=At4g13780 PE=2 SV=1
Length = 797
Score = 1027 bits (2656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/612 (78%), Positives = 540/612 (88%), Gaps = 4/612 (0%)
Query: 7 ENPAAPPPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYI 66
E+ PKLPIPGKRNILITSALPYVNNVPHLGNIIG VLSADV+AR+CRLRGYNAIYI
Sbjct: 2 EDDGKSSPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYI 61
Query: 67 CGTDEYGTATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQA 126
CGTDEYGTATETKA+E+NC+PKEICDKYH IHK+VY WF ISFD FGRTSTP+QTE CQA
Sbjct: 62 CGTDEYGTATETKALEENCTPKEICDKYHAIHKEVYDWFGISFDKFGRTSTPEQTEVCQA 121
Query: 127 IFKKLLDNNWLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLN 186
IF KL DN WL ENTMQQ YCDTCK+FLADRLVEG+CPFEGCNY+SARGDQCE CGKLLN
Sbjct: 122 IFNKLWDNKWLSENTMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKLLN 181
Query: 187 ATDLKDPKCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWL 246
T+LKDPKCKVC+N P+IRDT+HLF++LP L+++LE YI SV GSWSQNAIQ T+AWL
Sbjct: 182 PTELKDPKCKVCQNTPRIRDTDHLFIELPLLKDRLEAYIKKTSVTGSWSQNAIQTTNAWL 241
Query: 247 KEGLKVRCITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENV 306
++GL+ RCITRDLKWGVPVP E++K+KVFYVWFDAPIGYVSITSCYT+EWE+WWKNPENV
Sbjct: 242 RDGLRQRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTSEWEKWWKNPENV 301
Query: 307 ELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGND 366
ELYQFMGKDNVPFHTVMFPST LGT ENWTLMKTISVTEYLNYE GKFSKSKG+GVFGND
Sbjct: 302 ELYQFMGKDNVPFHTVMFPSTQLGTEENWTLMKTISVTEYLNYEDGKFSKSKGVGVFGND 361
Query: 367 AKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPG 426
KDTNIPVEVWRYYLLTNRPEVSDT F+W DLQAK N ELL+NLGNF+NRVLSFIAKP
Sbjct: 362 VKDTNIPVEVWRYYLLTNRPEVSDTSFSWTDLQAKLNGELLSNLGNFVNRVLSFIAKPDN 421
Query: 427 QGYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYL 486
GYGS++PDA+ AESH LTK+LAEKV K+V +Y+EAMEKVKLKQGLKTAM ISSEGN YL
Sbjct: 422 AGYGSVIPDAHDAESHSLTKSLAEKVEKFVAEYVEAMEKVKLKQGLKTAMLISSEGNYYL 481
Query: 487 QESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLC 546
Q SQFWKLYKED+P C++V+RT+ GLVHLLA LLEPFMPSFS EV KQLNL P+ SL
Sbjct: 482 QASQFWKLYKEDKPLCAVVIRTAAGLVHLLAQLLEPFMPSFSCEVFKQLNLPPQ--FSLS 539
Query: 547 DEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAA 606
DE+G+V A RPW+I+P H+IG+P PLFKEL++DEV +R KFAGSQ+DR RA EAA
Sbjct: 540 DERGEVLLASRPWDILPPSHRIGTPQPLFKELENDEVARYREKFAGSQSDR--RARDEAA 597
Query: 607 KTAEQLKKTKIS 618
A+QL KTK+S
Sbjct: 598 NLADQLNKTKLS 609
>sp|Q54X95|SYMC_DICDI Probable methionine--tRNA ligase, cytoplasmic OS=Dictyostelium
discoideum GN=metS PE=3 SV=1
Length = 736
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/586 (55%), Positives = 435/586 (74%), Gaps = 21/586 (3%)
Query: 9 PAAPPPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICG 68
P+ PP LP G+RNILITSALPYVNNVPHLGNIIG VLSADV+AR+CRL+ YN IYICG
Sbjct: 4 PSNTPP-LPKDGERNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLKNYNCIYICG 62
Query: 69 TDEYGTATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIF 128
TDEYGTATETKA+ + C+PKEICDKYH IHK++Y+WF+ISFD FGRTST QTE Q IF
Sbjct: 63 TDEYGTATETKALSEGCTPKEICDKYHEIHKEIYEWFNISFDKFGRTSTNSQTEIAQDIF 122
Query: 129 KKLLDNNWLIENTMQQPYCD-TCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNA 187
K+ DN + + ++Q YC+ TCK FLADR VEGTCP C +E ARGDQC+ C KLLN
Sbjct: 123 NKIKDNGYTLTQEIEQLYCEQTCKMFLADRFVEGTCPH--CKFEDARGDQCDGCSKLLNP 180
Query: 188 TDLKDPKCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK 247
T+L +P+CKVC P I+ T H+F+DLP L+ ++++++ S G+WS+N+I T+ W+K
Sbjct: 181 TELINPRCKVCSKPPVIKSTKHIFIDLPQLQQQVDQFVETNSKGGNWSENSIAITNTWVK 240
Query: 248 EGLKVRCITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVE 307
LK RCITRDLKWG PVP+E FK+KVFYVWFDAPIGY+SIT+ YTNEWE+WWKNPENV+
Sbjct: 241 GELKPRCITRDLKWGTPVPMEEFKDKVFYVWFDAPIGYISITAEYTNEWEKWWKNPENVK 300
Query: 308 LYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDA 367
L QFMGKDNVPFHTV+FP++L+G+ +N+TL+ +S TE+LNYE+GKFSKS+ GVFG+ A
Sbjct: 301 LVQFMGKDNVPFHTVIFPASLIGSKDNYTLLNNLSTTEFLNYETGKFSKSRNTGVFGDGA 360
Query: 368 KDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQ 427
K T IP EVWR+YLL NRPE SD++F+W D K NNELLNN GN +NRVL +
Sbjct: 361 KATGIPSEVWRFYLLNNRPESSDSIFSWDDFNFK-NNELLNNFGNLVNRVLKMLNT--NA 417
Query: 428 GYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQ 487
+ +VP E +++ K L ++V +++ QY + +E++ LK+GLK AMSIS GN Y+Q
Sbjct: 418 AFNGVVPKI--GELNEVDKKLVQEVDEHLVQYFQKLEEISLKEGLKIAMSISKLGNTYMQ 475
Query: 488 ESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCD 547
+++ W L +D C V+ + L+ LL+ LLEP++PS + +V++QLN++P K+ + D
Sbjct: 476 DNKPWDLSGKDNERCGQVLAILINLIKLLSTLLEPYIPSLTDKVHQQLNVEPTKYSTHFD 535
Query: 548 EKGDVDRARRPWEIIPAGHKIGSPN-PLFKELKDDEVEFFRSKFAG 592
IPAGH+I PL K+++ D+++ +R+KF+G
Sbjct: 536 INA-----------IPAGHEISKEILPLVKKIEADDLKKWRTKFSG 570
>sp|Q68FL6|SYMC_MOUSE Methionine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Mars PE=2
SV=1
Length = 902
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/599 (53%), Positives = 424/599 (70%), Gaps = 21/599 (3%)
Query: 14 PKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYG 73
P LP+PG+RN+LITSALPYVNNVPHLGNIIG VLSADVFAR+CRLR +N +Y+CGTDEYG
Sbjct: 258 PVLPVPGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYG 317
Query: 74 TATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLD 133
TATETKAME+ +P+EICDKYH IH D+Y+WF ISFD FGRT+TPQQT+ Q IF++LL
Sbjct: 318 TATETKAMEEGLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLT 377
Query: 134 NNWLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDP 193
+++ +T++Q C+ C RFLADR VEG CPF C YE ARGDQC+ CGKL+NA +LK P
Sbjct: 378 RGFVLRDTVEQLRCERCARFLADRFVEGVCPF--CGYEEARGDQCDRCGKLINAIELKKP 435
Query: 194 KCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVR 253
+CK+CR+ P +R + HLFLDLP L +LE+++ W+ NA +WL++GLK R
Sbjct: 436 QCKICRSCPVVRSSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPR 495
Query: 254 CITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMG 313
CITRDLKWG PVPLE F++KVFYVWFDA IGYVSIT+ YT++WE+WWKNPE V+LYQFM
Sbjct: 496 CITRDLKWGTPVPLEGFEDKVFYVWFDATIGYVSITANYTDQWEKWWKNPEQVDLYQFMA 555
Query: 314 KDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIP 373
KDNVPFH ++FP ++LG +N+TL+K I TEYLNYE GKFSKS+GIGVFG+ AKDT IP
Sbjct: 556 KDNVPFHGLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIP 615
Query: 374 VEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIV 433
++WR+YLL RPE D+ F+W DL K+N+ELLNNLGNFINR F++K +G V
Sbjct: 616 ADIWRFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSK----FFGGCV 671
Query: 434 PDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWK 493
P+ + L V ++ Y + +EKV+++ L++ ++IS GN Y+Q ++ WK
Sbjct: 672 PEMALTPDD---RRLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 728
Query: 494 LYK---EDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKG 550
K D+ V +V + LL+ +L+P+MP+ S + QL L P L
Sbjct: 729 RIKGGEMDRQRAGTVTGMAVNMAALLSVMLQPYMPTVSSTIQTQLQLPPAACRIL----- 783
Query: 551 DVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTA 609
A +PAGH+IG+ +PLF++L++D++E R +F G QA + A A TA
Sbjct: 784 ----ATSFICTLPAGHRIGTVSPLFQKLENDQIENLRQRFGGGQAKGSPKPAAVEAVTA 838
>sp|Q2T9L8|SYMC_BOVIN Methionine--tRNA ligase, cytoplasmic OS=Bos taurus GN=MARS PE=2
SV=1
Length = 898
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/590 (52%), Positives = 420/590 (71%), Gaps = 31/590 (5%)
Query: 14 PKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYG 73
P LP+ G+RN+LITSALPYVNNVPHLGNIIG VLSADVFAR+ RLR +N +Y+CGTDEYG
Sbjct: 256 PVLPVAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYG 315
Query: 74 TATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLD 133
TATETKAME+ +P+EICDKYHVIH D+Y+WF+ISFD FGRT+TPQQT+ Q IF++LL
Sbjct: 316 TATETKAMEEGLTPQEICDKYHVIHADIYRWFNISFDFFGRTTTPQQTKITQDIFQRLLA 375
Query: 134 NNWLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDP 193
+++++T++Q C+ C RFLADR VEG CPF C YE ARGDQC+ CGKL+NA +LK P
Sbjct: 376 RGFVLQDTVEQLRCEHCARFLADRFVEGVCPF--CGYEEARGDQCDKCGKLINAIELKKP 433
Query: 194 KCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVR 253
+CKVCR+ P ++ + HLFLDLP L ++EE++ W+ NA +WL++GLK R
Sbjct: 434 QCKVCRSCPVVKSSQHLFLDLPKLAARVEEWLEKTLPGSDWTANARFIIRSWLRDGLKPR 493
Query: 254 CITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMG 313
CITRDLKWG PVPLE F++KVFYVWFDA IGY+SIT+ YT++WE+WWKNPE V LYQFM
Sbjct: 494 CITRDLKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWEKWWKNPEQVNLYQFMA 553
Query: 314 KDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIP 373
KDNVPFH ++FPS+ LG +N+TL+ + TEYLNYE GKFSKS+G+GVFG+ A+DT IP
Sbjct: 554 KDNVPFHGIVFPSSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIP 613
Query: 374 VEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIV 433
++WR+YLL NRPE D+ F+W D+ K+N+ELLNNLGNFINR F++K +G V
Sbjct: 614 ADIWRFYLLYNRPEGQDSAFSWTDMLFKNNSELLNNLGNFINRAGMFVSK----FFGGFV 669
Query: 434 PDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWK 493
P+ Q L + ++ Y + +EKV+++ L++ ++IS GN Y+Q ++ WK
Sbjct: 670 PEMVLTSDDQ---RLLTHITLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726
Query: 494 LYK---EDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEK-----HISL 545
K D+ V +V + LL+ +L+P+MP+ S + QL L P L
Sbjct: 727 RIKGGEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILPTNFL 786
Query: 546 CDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQA 595
C +PAGH+IG+ +PLF++L++D++E + +F+G QA
Sbjct: 787 C--------------TLPAGHQIGTVSPLFQKLENDQIESLKQRFSGGQA 822
>sp|P56192|SYMC_HUMAN Methionine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=MARS PE=1
SV=2
Length = 900
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/586 (53%), Positives = 421/586 (71%), Gaps = 23/586 (3%)
Query: 14 PKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYG 73
P LP+ G+RN+LITSALPYVNNVPHLGNIIG VLSADVFAR+ RLR +N +Y+CGTDEYG
Sbjct: 256 PVLPVAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYG 315
Query: 74 TATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLD 133
TATETKA+E+ +P+EICDKYH+IH D+Y+WF+ISFD FGRT+TPQQT+ Q IF++LL
Sbjct: 316 TATETKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLK 375
Query: 134 NNWLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDP 193
+++++T++Q C+ C RFLADR VEG CPF C YE ARGDQC+ CGKL+NA +LK P
Sbjct: 376 RGFVLQDTVEQLRCEHCARFLADRFVEGVCPF--CGYEEARGDQCDKCGKLINAVELKKP 433
Query: 194 KCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVR 253
+CKVCR+ P ++ + HLFLDLP L +LEE++ W+ NA T +WL++GLK R
Sbjct: 434 QCKVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPR 493
Query: 254 CITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMG 313
CITRDLKWG PVPLE F++KVFYVWFDA IGY+SIT+ YT++WE+WWKNPE V+LYQFM
Sbjct: 494 CITRDLKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKNPEQVDLYQFMA 553
Query: 314 KDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIP 373
KDNVPFH+++FP + LG +N+TL+ + TEYLNYE GKFSKS+G+GVFG+ A+DT IP
Sbjct: 554 KDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIP 613
Query: 374 VEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIV 433
++WR+YLL RPE D+ F+W DL K+N+ELLNNLGNFINR F++K +G V
Sbjct: 614 ADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSK----FFGGYV 669
Query: 434 PDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWK 493
P+ Q L V ++ Y + +EKV+++ L++ ++IS GN Y+Q ++ WK
Sbjct: 670 PEMVLTPDDQ---RLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726
Query: 494 LYK---EDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEK-HISLCDEK 549
K D+ V +V + LL+ +L+P+MP+ S + QL L P I L +
Sbjct: 727 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFL 786
Query: 550 GDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQA 595
+PAGH+IG+ +PLF++L++D++E R +F G QA
Sbjct: 787 C----------TLPAGHQIGTVSPLFQKLENDQIESLRQRFGGGQA 822
>sp|Q6PF21|SYMC_XENLA Methionine--tRNA ligase, cytoplasmic OS=Xenopus laevis GN=mars PE=2
SV=1
Length = 905
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/641 (49%), Positives = 441/641 (68%), Gaps = 26/641 (4%)
Query: 2 GSTGEENPAA-PPPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRG 60
G TG P P P LP+ G++N+LITSALPYVNNVPHLGNIIGSVLSADVFAR+CRLR
Sbjct: 241 GLTGASKPKQRPHPILPVEGEKNVLITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRN 300
Query: 61 YNAIYICGTDEYGTATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQ 120
+N +YICGTDEYGTATETKAME+ +P++ICDKY+ IH +Y+WF+ISFD FGRT+T Q
Sbjct: 301 WNTLYICGTDEYGTATETKAMEEGLTPQQICDKYNAIHTAIYQWFNISFDYFGRTTTQHQ 360
Query: 121 TEACQAIFKKLLDNNWLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCEN 180
T Q IF +LL+ +L+ +T++Q C+ C+RFLADR VEG CPF CNYE ARGDQC+
Sbjct: 361 TTISQDIFHRLLEREFLLTDTVEQLRCEKCQRFLADRFVEGICPF--CNYEEARGDQCDK 418
Query: 181 CGKLLNATDLKDPKCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQ 240
CGKL+NA +LK P+CK+C+ +P I+ + HLFLDLP L +LE+++ G W+ NA
Sbjct: 419 CGKLINAVELKKPQCKICKQSPVIKSSKHLFLDLPKLEKRLEQWLEQSFSTGDWTSNARF 478
Query: 241 ATHAWLKEGLKVRCITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWW 300
T +W+++GLK RCITRDLKWG PVPL+ F++KVFYVWFDAPIGY+SIT+ YT++WE+WW
Sbjct: 479 ITRSWIRDGLKPRCITRDLKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWEKWW 538
Query: 301 KNPENVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGI 360
K+P+ V+LY FM KDNVPFH+V+FPS LLG +N+TL+ + TEYLNYE GKFSKS+G+
Sbjct: 539 KSPQQVQLYNFMAKDNVPFHSVVFPSCLLGAEDNYTLVNHLVATEYLNYEDGKFSKSRGV 598
Query: 361 GVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSF 420
GVFG+ AKDT IP ++WR+YLL RPE D+ F+W+DL K+N+ELLNNLGNF+NR F
Sbjct: 599 GVFGDMAKDTGIPADIWRFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAGMF 658
Query: 421 IAKPPGQGYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISS 480
+ K + VP+ E K L +V ++QY +EKV+++ L+ ++IS
Sbjct: 659 VQK----FFNGCVPE---MELLSEDKRLLAQVAAELQQYNLLLEKVRIRDALRCILNISR 711
Query: 481 EGNAYLQESQFWKLYK---EDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNL 537
GN Y+Q ++ WK K ++Q V +V + LL+ +L P+MP+ S + +QL +
Sbjct: 712 HGNQYIQVNEPWKCIKGNQQEQKRAGTVTGVAVNMAALLSIMLHPYMPTISSVIQEQLLM 771
Query: 538 QPEKHISLCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADR 597
E + D + +GH+IG+ +PLF++L++D++E R +F G Q
Sbjct: 772 PQESKVLTTDFCC----------CLQSGHQIGNVSPLFQKLENDQIESLRKRFGGGQVK- 820
Query: 598 IIRAEAEAAKTAEQLKKTKISGENGLCSLQSETSSNEGNQI 638
++ ++ A + + K SG + L E +GN +
Sbjct: 821 -TESKVSPSQEAPEQQAPKASGPERVKELMQEL-EKQGNHV 859
>sp|Q9UUF2|SYMC_SCHPO Probable methionine--tRNA ligase, cytoplasmic
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rar1 PE=3 SV=1
Length = 782
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/586 (53%), Positives = 406/586 (69%), Gaps = 24/586 (4%)
Query: 16 LPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTA 75
LP +RNILITSALPYVNNVPHLGNI+GS LSADVFAR+ R R +N +YICGTDEYGTA
Sbjct: 216 LPKSNERNILITSALPYVNNVPHLGNIVGSTLSADVFARYHRARNHNTLYICGTDEYGTA 275
Query: 76 TETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNN 135
TETKA+E+ SPKE+CDKYH +HK+VY WF+I FD+FGRT+TP+QT Q IF KL +N+
Sbjct: 276 TETKALEEGVSPKELCDKYHALHKEVYDWFEIDFDHFGRTTTPKQTGIAQHIFTKLYNND 335
Query: 136 WLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKC 195
++ +TM Q YC+ + +LADR VEGTCP C Y+ ARGDQC+ CG LLNA +L DPKC
Sbjct: 336 YMAIDTMTQLYCEVHQGYLADRYVEGTCP--KCGYDDARGDQCDGCGGLLNAFELIDPKC 393
Query: 196 KVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCI 255
K+ R P R+T H+FL L L+ +E + +V G WS N T +WLKEGL+ RCI
Sbjct: 394 KLDRATPVKRETKHVFLSLDKLQPAVESWAMQSAVEGKWSNNGRSITESWLKEGLRPRCI 453
Query: 256 TRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKD 315
TRDLKWG PVPLE FK KV YVWFDA IGY+SIT+ YT+EWE+WW+NPE V+LYQFMGKD
Sbjct: 454 TRDLKWGTPVPLEEFKGKVLYVWFDATIGYISITANYTDEWEKWWRNPEQVKLYQFMGKD 513
Query: 316 NVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVE 375
NVPFHTV+FPS+LLGTGE WT++ I+ T+YLNYE+GKFSKS+G+GVFGN A+D +
Sbjct: 514 NVPFHTVIFPSSLLGTGEKWTMLHHINTTDYLNYETGKFSKSRGVGVFGNTAQDIGLSPS 573
Query: 376 VWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPD 435
VWRYYLL++RPE SDT+FTW + + N+ELL NLGNF+NR L F Y +VP
Sbjct: 574 VWRYYLLSSRPETSDTMFTWKEFITRHNSELLANLGNFVNRTLKFTTAK----YNGLVPH 629
Query: 436 A---NGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQF- 491
+ +L + V + +Y A+E KL++GL+ AM IS+ GN YLQ+++
Sbjct: 630 YLTDPSVGAGKLKADFVKDVNALLAKYNAALEASKLREGLRLAMEISARGNQYLQDNRID 689
Query: 492 WKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGD 551
K Y ++ C+ + ++ L++LLA + P+MPS S + KQLN P I
Sbjct: 690 NKCYLYERQKCADAIGYALNLIYLLAAIFYPYMPSTSTSIYKQLN-APAAAIP------- 741
Query: 552 VDRARRPWEI-IPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQAD 596
WE+ + GH+IG P LF + + E +RSK+ G+ ++
Sbjct: 742 -----DTWELCLLPGHRIGEPEYLFTRIDESMEEEWRSKYGGNGSN 782
>sp|Q20970|SYMC_CAEEL Methionine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=mrs-1 PE=2 SV=1
Length = 917
Score = 619 bits (1595), Expect = e-176, Method: Compositional matrix adjust.
Identities = 305/616 (49%), Positives = 405/616 (65%), Gaps = 41/616 (6%)
Query: 12 PPPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDE 71
P LP PGKRNILIT+ALPYVNNVPHLGNIIG VLSADVFAR+C LRG+ Y+ GTDE
Sbjct: 25 PKSILPQPGKRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDE 84
Query: 72 YGTATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKL 131
YGTATETKA+++ C+P+E+CDKYH IHK +Y+WF I F +FGRT+T QTE CQ +F KL
Sbjct: 85 YGTATETKALQEGCTPRELCDKYHAIHKGIYEWFGIDFSHFGRTTTDHQTEICQDMFLKL 144
Query: 132 LDNNWLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLK 191
N + ++ Q YC+ C++FLADR V GTCP C Y+ ARGDQC+ CGKL+NA DLK
Sbjct: 145 HKNGYTSSQSVDQLYCNQCEKFLADRFVTGTCPM--CAYDDARGDQCDGCGKLINAVDLK 202
Query: 192 DPKCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVA--GSWSQNAIQATHAWLKEG 249
D KC +C+ P+++ + H+FL L L+ K E+++ WS NA+ T AW+K G
Sbjct: 203 DAKCHMCKATPEVKQSTHIFLSLDKLQQKTTEHLDRELAKEDNRWSSNAVGITKAWMKLG 262
Query: 250 LKVRCITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNE-WEQWWKNPENVEL 308
L RCITRDLKWG VPL+ F++KVFYVWFDAPIGY+SIT C + W +WWKNPENVEL
Sbjct: 263 LDPRCITRDLKWGTAVPLDGFEKKVFYVWFDAPIGYLSITKCVLGDNWTKWWKNPENVEL 322
Query: 309 YQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAK 368
+ F+GKDNV FH VMFP + LG +N+T++ + TEYLNYE KFSKS+G G+FG+ A+
Sbjct: 323 FNFVGKDNVAFHAVMFPCSQLGANDNYTVVNNLCATEYLNYEDTKFSKSRGTGIFGDAAQ 382
Query: 369 DTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQG 428
T IP ++WR+YLL RPE DT F+W D K N+ELLNNLGNFINR LSF+A
Sbjct: 383 GTEIPADIWRFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVA----NS 438
Query: 429 YGSIVPDANGAESHQLTKTLAE---KVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAY 485
+G +VP+ N LT AE ++ Q+ + + V LK +KT +++S GN Y
Sbjct: 439 FGGVVPEMN------LTNDDAEVLSEIHNECMQWDKQFDGVHLKDAVKTILNVSRLGNQY 492
Query: 486 LQESQFWKLYKEDQPS---CSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKH 542
+Q W L K+D+ ++ + + + ++ LL P MP+ S + +Q L
Sbjct: 493 MQAQTPWVLMKKDEEGKKRAGTIIGVAANIAYHVSVLLYPIMPTISATIREQCGLPALPL 552
Query: 543 ISLCDEKGDVDRARRPWEI--IPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIR 600
+ P+ I + AGHKIG P+PLF++L ++ F++KF GSQ
Sbjct: 553 FT-------------PFPICYLKAGHKIGQPSPLFQKLDPAQIAEFKAKFGGSQ-----D 594
Query: 601 AEAEAAKTAEQLKKTK 616
A++ A KTAE+ K+ K
Sbjct: 595 AQSSAPKTAEKPKQQK 610
>sp|P00958|SYMC_YEAST Methionine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MES1 PE=1 SV=4
Length = 751
Score = 612 bits (1578), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/581 (49%), Positives = 402/581 (69%), Gaps = 20/581 (3%)
Query: 16 LPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTA 75
LP P +RNILITSALPYVNNVPHLGNIIGSVLSAD+FAR+C+ R YNA++ICGTDEYGTA
Sbjct: 190 LPKPNERNILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTA 249
Query: 76 TETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNN 135
TETKA+E+ +P+++CDKYH IH DVYKWF I FD FGRT+T +QTE Q IF KL N
Sbjct: 250 TETKALEEGVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNG 309
Query: 136 WLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKC 195
+L E +M+Q YC +LADR VEG CP C+Y+ ARGDQC+ CG LL+ +L +P+C
Sbjct: 310 YLEEQSMKQLYCPVHNSYLADRYVEGECP--KCHYDDARGDQCDKCGALLDPFELINPRC 367
Query: 196 KVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCI 255
K+ +P+ + ++H+FL L L +++ E++ S G+WS+N+ T +WLK+GLK RCI
Sbjct: 368 KLDDASPEPKYSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCI 427
Query: 256 TRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKD 315
TRDL WG PVPLE++K+KV YVWFDA IGYVSITS YT EW+QWW NPE+V LYQFMGKD
Sbjct: 428 TRDLVWGTPVPLEKYKDKVLYVWFDATIGYVSITSNYTKEWKQWWNNPEHVSLYQFMGKD 487
Query: 316 NVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVE 375
NVPFHTV+FP + LGT ENWT++ ++ TEYL YE+GKFSKS+G+GVFGN+A+D+ I
Sbjct: 488 NVPFHTVVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPS 547
Query: 376 VWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPD 435
VWRYYL + RPE SD+ F+W D A++N+ELL NLGNF+NR++ F+ Y +VP
Sbjct: 548 VWRYYLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFV----NAKYNGVVPK 603
Query: 436 ANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWK-L 494
+ + L + + + + Y++ ME ++GL+ AMS+S+ GN +LQE++ L
Sbjct: 604 FDPKKVSNY-DGLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTL 662
Query: 495 YKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDR 554
+ + V+ + +++ ++ ++ P+MP ++NK LN K D++ +
Sbjct: 663 FSQSPEKSDAVVAVGLNIIYAVSSIITPYMPEIGEKINKMLNAPALK----IDDRFHL-- 716
Query: 555 ARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQA 595
I GH I LF+ + + +++ +R+K+ G Q
Sbjct: 717 ------AILEGHNINKAEYLFQRIDEKKIDEWRAKYGGQQV 751
>sp|Q73NT9|SYM_TREDE Methionine--tRNA ligase OS=Treponema denticola (strain ATCC 35405 /
CIP 103919 / DSM 14222) GN=metG PE=3 SV=1
Length = 793
Score = 579 bits (1493), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/596 (46%), Positives = 396/596 (66%), Gaps = 38/596 (6%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
L+TSALPYVNN PHLGN+I VLSADVFARFCRL+ Y +YICGTDEYGTATETKA+E+
Sbjct: 5 LVTSALPYVNNFPHLGNLI-QVLSADVFARFCRLKEYETLYICGTDEYGTATETKALEEK 63
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP+E+C YH IH ++Y WF+I+FD FGRTSTPQQTE Q IF L N ++ E+T++Q
Sbjct: 64 KSPEELCSFYHAIHAEIYNWFNIAFDYFGRTSTPQQTEITQGIFNDLDKNGYITEHTIEQ 123
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC +CKRFLADR V GTCP C+Y+ ARGDQCE+CGKLL+ TDLK+P+C C AP++
Sbjct: 124 LYCPSCKRFLADRYVLGTCP--SCSYDGARGDQCEHCGKLLDPTDLKEPRCSSCGAAPEV 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
R T HL+++LP + + E+++ + G WS NA+Q + +WL++GL+ R ITRDLKWG+P
Sbjct: 182 RSTTHLYINLPKIVPEYEKWMPKTAEEGRWSNNALQMSKSWLRDGLQERAITRDLKWGIP 241
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTN----EWEQWWKNPENVELYQFMGKDNVPFH 320
VP + F++KVFYVWFDAPIGY+SIT C+ + +W+ WW + +VEL+QF+GKDN+PFH
Sbjct: 242 VPKKGFEDKVFYVWFDAPIGYISITKCWADLAGKDWKAWWLDQNDVELFQFIGKDNIPFH 301
Query: 321 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYY 380
TV+FP +L+G+G+NWT + +S TEYLNYE+GKFSKSKG+GVFGNDAK++ IP ++WR+Y
Sbjct: 302 TVIFPCSLIGSGKNWTKLFHMSGTEYLNYENGKFSKSKGVGVFGNDAKESGIPADMWRFY 361
Query: 381 LLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAE 440
+ NRPE +DT FTW D Q + N+EL+ NL N +NR +FI + Y +P +GA+
Sbjct: 362 IFYNRPEKNDTQFTWKDFQERVNSELIGNLCNLVNRTATFIHR----YYDGKIPQVDGAK 417
Query: 441 SHQ-----LTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLY 495
S + + K+L E ++ E + +L+ A ++SS N Q+ + WK
Sbjct: 418 SGREDIKSMVKSLREAASASFKKITELSDWAELRDSFHEAFALSSVANKAFQDGEPWKRR 477
Query: 496 KEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRA 555
+ D +M L+ + L+ P+MP ++ ++ +K S G++
Sbjct: 478 ETDPEYAEALMSELCYLIKDILILIHPYMPQYA---DQAAGFFGQKIWS-----GNIFDG 529
Query: 556 RRPWEIIPAG--------------HKIGSPNPLFKELKDDEVEFFRSKFAGSQADR 597
+ P P G + +P +FK L + ++ +R +++GSQ DR
Sbjct: 530 KAPQFNKPEGSFLSWKNLGEREGLKTVENPVIIFKTLDNKVIDAYRERYSGSQKDR 585
>sp|O83776|SYM_TREPA Methionine--tRNA ligase OS=Treponema pallidum (strain Nichols)
GN=metG PE=3 SV=1
Length = 811
Score = 550 bits (1418), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/609 (43%), Positives = 380/609 (62%), Gaps = 47/609 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
LIT+ALPYVNNVPHLGN+I LSADVFARFCR+RGY+ ++CGTDEYGTA+ET+A E
Sbjct: 5 LITAALPYVNNVPHLGNLIQG-LSADVFARFCRMRGYHTCFVCGTDEYGTASETRAAEQG 63
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP ++C YH +H+D+Y+WFD+SFD FGRT++ TE QA+F+ L ++ E+ Q
Sbjct: 64 LSPAQLCAHYHALHRDIYQWFDLSFDYFGRTTSDAHTELTQALFRHLDARGFISEHESAQ 123
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC C RFLADR + GTCP C AR DQCE+CG LL L + +C C AP+
Sbjct: 124 AYCLHCARFLADRYLRGTCPH--CRNAEARADQCEHCGVLLEPETLLNARCVSCGTAPEF 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
R T HL+L+LPAL + + W++NA++ T WL+ GL+ R ITRDL+WGVP
Sbjct: 182 RPTRHLYLNLPALEKAYRSWFCTTN--HLWTKNAVRMTEGWLRTGLQERAITRDLRWGVP 239
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTN----------------EWEQWWKNPENVEL 308
VP F++KVFYVWFDAP+GY+SIT C T +W+ WW + ++VEL
Sbjct: 240 VPKAGFEQKVFYVWFDAPVGYISITKCGTEAASSQEGGGTDDGVKEKWQSWWLDQQDVEL 299
Query: 309 YQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAK 368
QF+GKDN+PFHT+ FP L+G+G+ WT++ +S TEYLNYE GKFSKS G+GVFG+DAK
Sbjct: 300 VQFVGKDNIPFHTLFFPCMLIGSGQRWTMLTRLSATEYLNYEGGKFSKSLGVGVFGSDAK 359
Query: 369 DTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQG 428
++ IP ++WR+YLL +RPE SD FTW + Q + N+EL+ NL N +NR L+F+A+
Sbjct: 360 ESGIPSDLWRFYLLYHRPEKSDAHFTWHEFQERVNSELIGNLCNLVNRTLTFVART---- 415
Query: 429 YGSIVPDANGAESHQL-----TKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGN 483
YG +VP +GA S + T L E V ++ + ME+V+L++ + ++S+ N
Sbjct: 416 YGGVVPAQDGARSTRAQVMEETLALREAVRNTAKRMTDLMEQVQLREAFREVFALSARAN 475
Query: 484 AYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQ----- 538
LQ+ WK +D+ +MR ++ + L PF+P ++ + + L +Q
Sbjct: 476 KALQDGAPWKTRAQDRERADALMRELCYVIRDVLILAHPFLPWYTQQAARFLGVQLSSCA 535
Query: 539 PEKHISLCDEKGDVDRARRPWEIIP------AGHKIG-----SPNPLFKELKDDEVEFFR 587
PE ++C K D D A +P + P G + G P LF+ L+ + + +R
Sbjct: 536 PEGGGAVCAAKKDADTA-QPDTVQPTLRWSDVGERKGLTQVHPPVILFRPLETETIAAYR 594
Query: 588 SKFAGSQAD 596
+++AG+ D
Sbjct: 595 ARYAGTARD 603
>sp|Q660T5|SYM_BORGA Methionine--tRNA ligase OS=Borrelia garinii (strain PBi) GN=metG
PE=3 SV=1
Length = 724
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/507 (47%), Positives = 337/507 (66%), Gaps = 14/507 (2%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
L+T+ALPYVNN+PHLGN++ VLSAD FAR+ ++ G +YICGTDEYGTATETKA+ +
Sbjct: 6 LVTAALPYVNNIPHLGNLV-QVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEK 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP E+C+KY+ IHK +YKWF+I FD FGRT+ + Q F KL N ++ E +Q
Sbjct: 65 TSPLELCNKYYKIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLKLEKNGYIKERETEQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
+C+ FLADR V G CP C A+GDQCENC KLLN DL +PKC +C+N P +
Sbjct: 125 FFCNKDSIFLADRYVIGECP--ECQ-SIAKGDQCENCSKLLNPIDLINPKCIICKNKPVL 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+ TNHL++DLP ++ KLE++I N + + +W+ NA++ T+A+L++GLK R ITRDLKWG+P
Sbjct: 182 KKTNHLYIDLPKIKRKLEKWIKNSTTSKNWNTNALKMTNAFLRDGLKERAITRDLKWGIP 241
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFHTVMF 324
VP + ++ KVFYVWFDAPIGY+SIT WE WWKN E V L QF+GKDN+ FHTV+F
Sbjct: 242 VPKKGYENKVFYVWFDAPIGYISITKNLVKNWESWWKNNEQVNLVQFIGKDNILFHTVIF 301
Query: 325 PSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYYLLTN 384
PS +G+ ENWT++ +S +EYLNYE+ KFSKS+G G+FGND T IP +VWR+Y+ N
Sbjct: 302 PSIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYN 361
Query: 385 RPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAESHQL 444
RPE SD F W DL + N EL++N N +NRVL+F K +G ++ E+ ++
Sbjct: 362 RPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKK----FFGDVI------ETIEI 411
Query: 445 TKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQPSCSI 504
+++ + L +K +LK LK + ISS GN Q+++ WK
Sbjct: 412 QNKFWKQIIPKYNKILNLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKDSSPQETKE 471
Query: 505 VMRTSVGLVHLLACLLEPFMPSFSVEV 531
++ + L+ L+ L+ PF+P S ++
Sbjct: 472 LISNLIYLIRDLSILMMPFIPETSKKI 498
>sp|Q44951|SYM_BORBU Methionine--tRNA ligase OS=Borrelia burgdorferi (strain ATCC 35210
/ B31 / CIP 102532 / DSM 4680) GN=metG PE=3 SV=2
Length = 734
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/507 (47%), Positives = 337/507 (66%), Gaps = 14/507 (2%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
L+T+ALPYVNN+PHLGN++ VLSAD FAR+ ++ G +Y+CGTDEYGTATETKA+ +N
Sbjct: 6 LVTAALPYVNNIPHLGNLV-QVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIEN 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
+P E+C+KY+ IHK +YKWF+I FD FGRT+ + Q F +L N ++ E +Q
Sbjct: 65 TTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ FLADR V G CP C A+GDQC+NC KLLN TDL +PKC +C+N P +
Sbjct: 125 FYCNKDSMFLADRYVIGECP--ECQ-SMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+ TNHL+LDLP ++ KLE++I N + +W+ NA++ T A+L++GLK R ITRDLKWG+P
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRDLKWGIP 241
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFHTVMF 324
VP + F+ KVFYVWFDAPIGY+SIT WE WWKN + V L QF+GKDN+ FHT++F
Sbjct: 242 VPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIF 301
Query: 325 PSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYYLLTN 384
P +G+ ENWT++ +S +EYLNYE+ KFSKS+G G+FGNDA T IP ++WR+Y+ N
Sbjct: 302 PCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYN 361
Query: 385 RPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAESHQL 444
RPE SD F W DL + N EL++N N +NRVL+F K +G ++ E+ ++
Sbjct: 362 RPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRK----FFGDVI------ETIEI 411
Query: 445 TKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQPSCSI 504
+++ + L +K +LK LK + ISS GN Q+++ WK
Sbjct: 412 QNKFWKQITPKYNKILNLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKE 471
Query: 505 VMRTSVGLVHLLACLLEPFMPSFSVEV 531
++ + L+ L+ L+ PF+P S ++
Sbjct: 472 LISNLIYLIRDLSILMMPFIPETSKKI 498
>sp|B7J2F0|SYM_BORBZ Methionine--tRNA ligase OS=Borrelia burgdorferi (strain ZS7)
GN=metG PE=3 SV=1
Length = 734
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/507 (47%), Positives = 337/507 (66%), Gaps = 14/507 (2%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
L+T+ALPYVNN+PHLGN++ VLSAD FAR+ ++ G +Y+CGTDEYGTATETKA+ +N
Sbjct: 6 LVTAALPYVNNIPHLGNLV-QVLSADAFARYSKMSGIKTLYVCGTDEYGTATETKALIEN 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
+P E+C+KY+ IHK +YKWF+I FD FGRT+ + Q F +L N ++ E +Q
Sbjct: 65 TTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
+C+ FLADR V G CP C A+GDQC+NC KLLN TDL +PKC +C+N P +
Sbjct: 125 FFCNKDSMFLADRYVIGECP--ECQ-SMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+ TNHL+LDLP ++ KLE++I N + +W+ NA++ T A+L++GLK R ITRDLKWG+P
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRDLKWGIP 241
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFHTVMF 324
VP + F+ KVFYVWFDAPIGY+SIT WE WWKN + V L QF+GKDN+ FHT++F
Sbjct: 242 VPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIF 301
Query: 325 PSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYYLLTN 384
P +G+ ENWT++ +S +EYLNYE+ KFSKS+G G+FGNDA T IP ++WR+Y+ N
Sbjct: 302 PCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYN 361
Query: 385 RPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAESHQL 444
RPE SD F W DL + N EL++N N +NRVL+F K +G ++ E+ ++
Sbjct: 362 RPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRK----FFGDVI------ETIEI 411
Query: 445 TKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQPSCSI 504
+++ + L +K +LK LK + ISS GN Q+++ WK
Sbjct: 412 QNKFWKQITPKYNKILNLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKE 471
Query: 505 VMRTSVGLVHLLACLLEPFMPSFSVEV 531
++ + L+ L+ L+ PF+P S ++
Sbjct: 472 LISNLIYLIRDLSILMMPFIPETSKKI 498
>sp|B5RME0|SYM_BORDL Methionine--tRNA ligase OS=Borrelia duttonii (strain Ly) GN=metG
PE=3 SV=1
Length = 726
Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/508 (47%), Positives = 330/508 (64%), Gaps = 14/508 (2%)
Query: 21 KRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKA 80
K+ LIT+ALPYVNN+PHLGN++ VLSAD FAR+ R+ G +Y+CGTDEYGTATETKA
Sbjct: 2 KKKNLITAALPYVNNIPHLGNLV-QVLSADAFARYSRMMGIETLYVCGTDEYGTATETKA 60
Query: 81 MEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIEN 140
+ + +P+E+C+KYH IHK +Y+WF+I FD FGRT+ E Q +F KL N ++ E
Sbjct: 61 LIEKTTPEELCNKYHAIHKSIYEWFNIKFDIFGRTTNKYHKETVQDLFLKLDKNGYITEK 120
Query: 141 TMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRN 200
+Q +C K FLADR V G CP G N +GDQCENC LL +L +P+C +C+N
Sbjct: 121 ENEQFFCQQDKMFLADRYVTGECPNCGNN---TKGDQCENCSNLLVTNELLNPRCIICKN 177
Query: 201 APQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLK 260
P I+ T HL++DLP ++N+LE +I + +W+ NAI+ T+A+L++GLK R ITRDLK
Sbjct: 178 IPIIKKTKHLYIDLPKIKNELEHWIQQIDQNTNWNTNAIKITNAFLRDGLKERTITRDLK 237
Query: 261 WGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFH 320
WG+PVP + ++ KVFYVWFDAPIGY+SIT +WE WWKN E+ L QF+GKDN+ FH
Sbjct: 238 WGIPVPKKEYENKVFYVWFDAPIGYISITKEIIKDWESWWKNNEDTNLIQFIGKDNILFH 297
Query: 321 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYY 380
T+MFPS LG+ ENWT++ ++ +EYLNYE+ KFSKS G G+FGND T IP +VWR+Y
Sbjct: 298 TIMFPSIELGSQENWTMLNKLASSEYLNYENLKFSKSAGTGIFGNDVITTGIPSDVWRFY 357
Query: 381 LLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAE 440
+ NRPE +D F W D + N+EL+ N N INRVL+F K G I
Sbjct: 358 IYYNRPEKADFQFMWDDFMERINSELIGNFSNLINRVLTFYKKFFGDKIDKI-------- 409
Query: 441 SHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQP 500
+L + + V E+ + ++++LK LK + IS GN Q+ + WK
Sbjct: 410 --ELNENFWQIVNIKYERTINFFKQIELKAALKEILDISRIGNKIFQDKEPWKTKNSTPQ 467
Query: 501 SCSIVMRTSVGLVHLLACLLEPFMPSFS 528
+ ++ + L+ L+ L+ PFMP S
Sbjct: 468 TTKELLLNLIYLIRDLSILISPFMPHTS 495
>sp|Q0SMS1|SYM_BORAP Methionine--tRNA ligase OS=Borrelia afzelii (strain PKo) GN=metG
PE=3 SV=1
Length = 724
Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/507 (47%), Positives = 336/507 (66%), Gaps = 14/507 (2%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
LIT+ALPYVNN+PHLGN++ VLSAD FAR+ ++ G +YICGTDEYGTATETKA+ +
Sbjct: 6 LITAALPYVNNIPHLGNLV-QVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEK 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
+P E+C+KY+ IHK +YKWF+I FD FGRT+ E Q F KL N ++ E +Q
Sbjct: 65 TTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQETVQNFFLKLEKNGYIKERETEQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
+C+ FLADR V G CP C A+GDQC+NC KLLN TDL +PKC +C+N P +
Sbjct: 125 FFCNKDLIFLADRYVIGECP--ECQ-SMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+ TNHL++DLP ++ KLE++I N + + +W+ NA++ T+A+L++GLK R ITRDLKWG+P
Sbjct: 182 KKTNHLYIDLPKIKTKLEKWIKNPTTSKNWNTNALKMTNAFLRDGLKERAITRDLKWGIP 241
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFHTVMF 324
VP + ++ KVFYVWFDAPIGY+SIT WE WWKN + V L QF+GKDN+ FHT+MF
Sbjct: 242 VPKKGYENKVFYVWFDAPIGYISITKNIVKNWESWWKNNKQVNLVQFIGKDNILFHTIMF 301
Query: 325 PSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYYLLTN 384
P +G+ ENWT + +S +EYLNYE+ KFSKS+G G+FGND T IP +VWR+Y+ N
Sbjct: 302 PCIKIGSKENWTTLNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYN 361
Query: 385 RPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAESHQL 444
RPE SD F W DL + N EL++N N +NRVL+F K +G ++ E+ ++
Sbjct: 362 RPEKSDFQFIWQDLMERVNTELIDNFSNLVNRVLTFQKK----FFGDVI------ETIEI 411
Query: 445 TKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQPSCSI 504
E++ + L + +LK LK + ISS GN Q+++ WK +
Sbjct: 412 QHKFWEQITPKYNKILNLFKNTELKSALKEILKISSFGNKIFQDNEPWKRKESSPQEIKE 471
Query: 505 VMRTSVGLVHLLACLLEPFMPSFSVEV 531
++ + L+ L+ L+ PF+P S ++
Sbjct: 472 LILNLIYLIRDLSILMMPFIPETSKKI 498
>sp|B5RPT6|SYM_BORRA Methionine--tRNA ligase OS=Borrelia recurrentis (strain A1) GN=metG
PE=3 SV=1
Length = 726
Score = 504 bits (1298), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/504 (47%), Positives = 328/504 (65%), Gaps = 14/504 (2%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
LIT+ALPYVNN+PHLGN++ VLSAD FAR+ R+ G +Y+CGTDEYGTATETKA+ +
Sbjct: 6 LITAALPYVNNIPHLGNLV-QVLSADAFARYSRMMGIETLYVCGTDEYGTATETKALIEK 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
+P+E+C+KYH IHK +Y+WF+I FD FGRT+ E Q +F KL N ++ E +Q
Sbjct: 65 TTPEELCNKYHAIHKSIYEWFNIKFDIFGRTTNKYHKETVQDLFLKLDKNGYITEKENEQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
+C + FLADR V G CP G N +GDQCENC LL +L +P+C +C+N P I
Sbjct: 125 FFCQQDQMFLADRYVTGECPNCGNN---TKGDQCENCSNLLVTNELLNPRCIICKNIPII 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+ T HL++DLP ++N+LE +I + +W+ NAI+ T+A+L++GLK R ITRDLKWG+P
Sbjct: 182 KKTKHLYIDLPKIKNELEHWIQQIDQNTNWNINAIKITNAFLRDGLKERTITRDLKWGIP 241
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFHTVMF 324
VP + ++ KVFYVWFDAPIGY+SIT +WE WWKN E+ L QF+GKDN+ FHT+MF
Sbjct: 242 VPKKEYENKVFYVWFDAPIGYISITKEIIKDWESWWKNNEDTNLIQFIGKDNILFHTIMF 301
Query: 325 PSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYYLLTN 384
PS LG+ ENWT++ ++ +EYLNYE+ KFSKS G G+FGND T IP +VWR+Y+ N
Sbjct: 302 PSIELGSQENWTMLNKLASSEYLNYENLKFSKSAGTGIFGNDVITTEIPSDVWRFYIYYN 361
Query: 385 RPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAESHQL 444
RPE +D F W D + N+EL+ N N INRVL+F K G I +L
Sbjct: 362 RPEKADFQFMWDDFMERINSELIGNFSNLINRVLTFYKKFFGDKIDKI----------EL 411
Query: 445 TKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQPSCSI 504
+ + V E+ + ++++LK LK + IS GN Q+ + WK +
Sbjct: 412 NENFWQIVNIKYERTINFFKQIELKAALKEILDISRIGNKIFQDKEPWKTKNSTPQTTKE 471
Query: 505 VMRTSVGLVHLLACLLEPFMPSFS 528
++ + L+ L+ L+ PFMP S
Sbjct: 472 LLLNLIYLIRDLSILISPFMPHTS 495
>sp|B2S0T6|SYM_BORHD Methionine--tRNA ligase OS=Borrelia hermsii (strain DAH) GN=metG
PE=3 SV=1
Length = 729
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 336/513 (65%), Gaps = 14/513 (2%)
Query: 21 KRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKA 80
K+ LIT+ALPYVNN+PHLGN++ VLSAD FAR+ R+ G +Y+CGTDEYGTATETKA
Sbjct: 2 KKKNLITAALPYVNNIPHLGNLV-QVLSADAFARYSRMMGIETLYVCGTDEYGTATETKA 60
Query: 81 MEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIEN 140
+ + +P+E+C+KY+ IHK +Y+WF+I FD FGRT+ + E Q +F KL N + E
Sbjct: 61 LIEKTTPEELCNKYYEIHKSIYEWFNIKFDIFGRTTNKRHKETVQDLFLKLEKNGYTTEK 120
Query: 141 TMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRN 200
+Q +C + FLADR V G CP G N A+GDQCENC KLL+ TDL +PKC +C+N
Sbjct: 121 ESEQFFCKQDQMFLADRYVTGECPNCGNN---AKGDQCENCSKLLSPTDLINPKCIICKN 177
Query: 201 APQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLK 260
P I+ T H+++DLP ++++L ++ + +W+ NAI+ T+A+L++GLK R ITRDLK
Sbjct: 178 IPIIKTTKHIYIDLPKIKDELSHWMQITELNTNWNTNAIKITNAFLRDGLKERAITRDLK 237
Query: 261 WGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFH 320
WG+PVP + ++ KVFYVWFDAPIGY+SIT + +WE WWKN E L QF+GKDN+ FH
Sbjct: 238 WGIPVPKKEYENKVFYVWFDAPIGYISITKEISKDWESWWKNNEETNLVQFIGKDNILFH 297
Query: 321 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYY 380
TV+FPS LG+ ENWT++ ++ +EYLNYE+ KFSKS G G+FGND T IP ++WR+Y
Sbjct: 298 TVIFPSIALGSKENWTMLSKLASSEYLNYENLKFSKSAGTGIFGNDVITTGIPSDIWRFY 357
Query: 381 LLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAE 440
+ NRPE SD F W D + N+EL+ N N +NRVL+F K G I
Sbjct: 358 IYYNRPEKSDFQFMWDDFMERVNSELIGNFSNLVNRVLTFYKKFFGDQIDKI-------- 409
Query: 441 SHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQP 500
++ + +++ ++ L ++V+LK LK + IS GN Q+ + WK
Sbjct: 410 --EIKEDFWQEINLKYDKTLNFFKQVELKSALKEILDISRTGNKIFQDKEPWKTKDSTPQ 467
Query: 501 SCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNK 533
++ + L+ L+ L+ PF+P S ++ +
Sbjct: 468 KTKELLLNLIYLIRDLSILISPFIPHTSDKIRR 500
>sp|A1R019|SYM_BORT9 Methionine--tRNA ligase OS=Borrelia turicatae (strain 91E135)
GN=metG PE=3 SV=1
Length = 726
Score = 490 bits (1261), Expect = e-137, Method: Compositional matrix adjust.
Identities = 229/513 (44%), Positives = 333/513 (64%), Gaps = 14/513 (2%)
Query: 21 KRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKA 80
K+ LIT+ALPYVNN+PHLGN++ VLSAD FAR+ R+ + +Y+CGTDEYGTATETKA
Sbjct: 2 KKKNLITAALPYVNNIPHLGNLV-QVLSADAFARYSRMMDIDTLYVCGTDEYGTATETKA 60
Query: 81 MEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIEN 140
+ + +P+E+C++Y+ IHK +Y+WF+I FD FGRT+ + Q +F KL N ++ +
Sbjct: 61 LIEKTTPEELCNRYYAIHKSIYEWFNIKFDIFGRTTNKSHKQTVQDLFLKLEKNGYITDK 120
Query: 141 TMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRN 200
+Q +C + FLADR V G CP G N A+GDQCENC KLL DL +PKC +C+N
Sbjct: 121 ESEQFFCQQDQMFLADRYVTGECPNCGNN---AKGDQCENCSKLLAPIDLINPKCIICKN 177
Query: 201 APQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLK 260
P I+ T HL+++LP ++N+L ++ +W+ NAI+ T+A+L++GLK R ITRDLK
Sbjct: 178 IPIIKTTKHLYINLPKIKNELIHWMQTTEHNTNWNTNAIKTTNAFLRDGLKERAITRDLK 237
Query: 261 WGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFH 320
WG+PVP + ++ KVFYVWFDAPIGY+SIT + +WE WWKN + L QF+GKDN+ FH
Sbjct: 238 WGIPVPKKEYENKVFYVWFDAPIGYISITKEISKDWESWWKNNKETNLVQFIGKDNILFH 297
Query: 321 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYY 380
TV+FP+ LG+ ENWT++ ++ +EYLNYE KFSKS GIG+FGND T I ++WR+Y
Sbjct: 298 TVIFPAIKLGSKENWTMLGKLASSEYLNYEHLKFSKSAGIGIFGNDVITTGISADIWRFY 357
Query: 381 LLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAE 440
+ NRPE SD F W D + N+EL+ N N +NRVL+F K G +I
Sbjct: 358 IYYNRPEKSDFQFMWDDFMERINSELIGNFSNLVNRVLTFYKKFFGDKIDTI-------- 409
Query: 441 SHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQP 500
++ + +++ ++ L ++++LK LK + IS GN Q+ + WK
Sbjct: 410 --EIKEDFWKEINLKYDKTLNFFKQIELKSALKEILDISRIGNKIFQDKEPWKTKDSTPK 467
Query: 501 SCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNK 533
++ + L+ L+ L+ PF+P S ++ +
Sbjct: 468 KTKELLLNLIYLIRDLSILISPFIPHTSDKIRR 500
>sp|Q8SQW5|SYMC_ENCCU Probable methionine--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU11_0890 PE=3 SV=1
Length = 550
Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/567 (43%), Positives = 334/567 (58%), Gaps = 42/567 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
ITSALPYVNN PHLGNIIGSVLS DV++R+C+ +G ++YICGTDEYGTA E +A+
Sbjct: 4 FITSALPYVNNQPHLGNIIGSVLSGDVYSRYCKKKGEVSVYICGTDEYGTAIEMEAISQG 63
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
+P EIC+K +HK VY WF+I FD FG TS+ T Q +F K+ DN E ++Q
Sbjct: 64 VTPLEICEKNRKLHKQVYDWFNIDFDYFGFTSSATHTGLVQDLFMKMYDNGHFSEVEIEQ 123
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ C FLADR + G C F C ARGDQC++CG N+ +L P+C +C ++P +
Sbjct: 124 FYCEHCGLFLADRFIVGECKF--CGDGRARGDQCDSCGHTYNSLELLSPRCSICSSSPVV 181
Query: 205 RDTNHLFLDLPALRNKLEE-YINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLK--W 261
R T HLF DL A R LEE Y N + WSQNA W+ RC+TRDLK W
Sbjct: 182 RATTHLFFDLEAFRPSLEELYRTNGHL---WSQNAQNIFRQWISMEFYPRCMTRDLKFNW 238
Query: 262 GVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNE-WEQWWKNPENVELYQFMGKDNVPFH 320
GVPVPLE+FKEKVFYVWFDAPIGY++ E + +W K + EL QFMGKDNV FH
Sbjct: 239 GVPVPLEKFKEKVFYVWFDAPIGYLTFLKELVGEDFGEWCK---DAELVQFMGKDNVAFH 295
Query: 321 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVE-VWRY 379
TV+FP+ L TGE + +++ +S TEYL +E+ KFSKS+ G+FG D + +WRY
Sbjct: 296 TVIFPAMLYATGEKYPVVRRLSATEYLQFENEKFSKSRRHGIFGLDLVGGGLGKSCMWRY 355
Query: 380 YLLTNRPEVS-DTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANG 438
YLL RPE + D+ FT++D + +L+NNLGNF+NRVL +I + D+
Sbjct: 356 YLLKIRPESTKDSNFTFSDFRQSVTADLINNLGNFVNRVLKYIQSKCNSRVSLLELDSG- 414
Query: 439 AESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKED 498
K E V + +Y ME++KL++ L+ M I GN Y+QE + D
Sbjct: 415 ------DKKCIEDVNELYCKYKAKMEEIKLREALQVVMEICRRGNEYIQEG----VRSRD 464
Query: 499 QPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRP 558
+ + S+ + L+ LL PF+P S+E+ + NL E+ + R
Sbjct: 465 RKGHFFCLGFSI--IGLVGTLLHPFIPVTSLEILRMCNL----------EETMFPESMR- 511
Query: 559 WEIIPAGHKIGSP-NPLFKELKDDEVE 584
I GH +GS PLF++ +++E
Sbjct: 512 ---IVDGHTMGSDIRPLFEDFTTEQIE 535
>sp|A8ZQ66|SYM1_ACAM1 Methionine--tRNA ligase 1 OS=Acaryochloris marina (strain MBIC
11017) GN=metG1 PE=3 SV=1
Length = 558
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/575 (40%), Positives = 326/575 (56%), Gaps = 28/575 (4%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
LITSALPY+N + HLGN++GS+L AD++ARF R G +YIC TDE+GT E A++
Sbjct: 4 LITSALPYINGIKHLGNLVGSMLPADIYARFLRQEGEEVLYICATDEHGTPAEIAAIDAG 63
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
E C K + K++YK F +SFD FGRTS P+ E Q +++L N++ E + Q
Sbjct: 64 LEVAEFCAKQYHKQKEIYKRFGLSFDYFGRTSAPENHELTQYFYQQLAKQNFIEEREISQ 123
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP-Q 203
Y +RFL DR V GTCP C YE ARGDQCENC K+L T+L P+ + + +
Sbjct: 124 FYALDDQRFLPDRYVTGTCPH--CGYEQARGDQCENCTKVLTPTELIKPRSTISGSTHLE 181
Query: 204 IRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGV 263
+R + HLFL L L +++ +++ + WS WL EGLK RCITRDL WGV
Sbjct: 182 LRTSRHLFLRLDKLSDEVRNWVDKQT---QWSTLTKSIALKWLNEGLKSRCITRDLVWGV 238
Query: 264 PVPLERFKEKVFYVWFDAPIGYVSITSCY----TNEWEQWWKNPENVELYQFMGKDNVPF 319
PVP E F+ KVFYVWFDAPIGY+S T + N+WE WWK ++V QFM KDN+PF
Sbjct: 239 PVPTEGFERKVFYVWFDAPIGYISATKAWGDITNNDWECWWKESDDVHYTQFMAKDNLPF 298
Query: 320 HTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRY 379
HT+M+P+T+LG+ E W ++ I +LNY GKFS S GVF + A + + WRY
Sbjct: 299 HTIMWPATILGSREPWKMVDYIKGFNWLNYYGGKFSTSSQRGVFLDQALEI-ASADNWRY 357
Query: 380 YLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGY--GSIVPDAN 437
L+ N PE +D+ FTW Q + N EL +NLGNF+NR+L F A G G DA
Sbjct: 358 MLIANAPESADSAFTWEQFQKQVNKELADNLGNFVNRILKFTASRFGMTLPEGGTPGDAE 417
Query: 438 GAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKE 497
AE L EK+ KY + ++ ++ +T ++ GN Y+ W L+K
Sbjct: 418 -AELQVTCNELVEKLRKY-------LHNLEFRRATETLNALWRTGNQYIDVRAPWVLFKT 469
Query: 498 DQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARR 557
DQ ++V+RT V L+ L A PF+P + + L L + E D+
Sbjct: 470 DQDETAMVIRTCVNLIRLYAISSAPFIPHTTQALFDALQLTDVERRHTMTEASDL----- 524
Query: 558 PWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAG 592
++ AG P PLF+++ DD V ++++ G
Sbjct: 525 --TLLAAGRSFMVPAPLFQKIDDDLVAELKAQYGG 557
>sp|Q82F60|SYM_STRAW Methionine--tRNA ligase OS=Streptomyces avermitilis (strain ATCC
31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=metG PE=3 SV=1
Length = 574
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/586 (38%), Positives = 336/586 (57%), Gaps = 35/586 (5%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
LITSALPY+N + HLGN++GS+L ADV++R+ R RG++ +YIC TDE+GT E A E
Sbjct: 5 LITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKERG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
E C + H K VY F+++FD FGR+S+ Q E Q ++L +N ++ E ++Q
Sbjct: 65 LPVDEFCAQAHDAQKAVYDGFELAFDYFGRSSSEQNREITQHFARRLNENGFIEERAIRQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP-Q 203
Y RFL DR VEGTCP C Y+ ARGDQCENC ++L+ TDL +P+ + + +
Sbjct: 125 VYSPADGRFLPDRYVEGTCPH--CGYDKARGDQCENCTRVLDPTDLINPRSAISGSTDLE 182
Query: 204 IRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGV 263
+R+T HLFL L++++EE++ W Q A WL EGL R ITRDL WGV
Sbjct: 183 VRETKHLFLLQSKLQHEVEEWVARHE--EEWPQLASSIARKWLNEGLHDRAITRDLDWGV 240
Query: 264 PVPLERFKE-----KVFYVWFDAPIGYVSITSCYTN------EWEQWWKNPEN----VEL 308
PVP + + E KVFYVWFDAPI Y+ T +++ +W+ WW + ++ V
Sbjct: 241 PVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWSDLDPENRDWKSWWYDADSGENPVRY 300
Query: 309 YQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAK 368
+FM KDNVPFHTVMFP+T LG E W + + +L Y GKFS S+ GVF + A
Sbjct: 301 TEFMAKDNVPFHTVMFPATELGVREPWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDHAL 360
Query: 369 DTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQG 428
+ +P + WRY+L+ N PE D+ FTW A N +L + LGNF+NRVLSF K
Sbjct: 361 EI-LPADYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSKK----R 415
Query: 429 YGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQE 488
+G VP GA + + L E++ + +Y ME ++ ++ ++ S GN+YL+E
Sbjct: 416 FGEEVP--AGAPAGESETKLGEEIAALLAEYESHMETLQFRKAAAALRALWSAGNSYLEE 473
Query: 489 SQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLC-D 547
W K + ++ +RT++ L+HL + + EPF+P+ S + L + + D
Sbjct: 474 KAPWLEIKTNPEGAALTLRTAMNLIHLYSVVSEPFIPASSKAMRSAFALSEDTATWVTQD 533
Query: 548 EKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGS 593
E +D +PAG P LF ++ D+++E ++ +F G+
Sbjct: 534 EAKSLDS-------VPAGTPFTVPPVLFAKITDEDLESYKERFGGA 572
>sp|C4V943|SYMC_NOSCE Probable methionine--tRNA ligase, cytoplasmic OS=Nosema ceranae
(strain BRL01) GN=NCER_101052 PE=3 SV=2
Length = 560
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/574 (40%), Positives = 332/574 (57%), Gaps = 44/574 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
+ITSALPYVNN PHLGNIIG VLSAD++ARFCR + +++ GTDEYGTA E A N
Sbjct: 10 IITSALPYVNNQPHLGNIIGCVLSADMYARFCRKNNEDVVFLSGTDEYGTAIEMAAFAQN 69
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
+P +IC++ +IHK +Y WF+I FD FG T++ T+ Q F K+ +N + E ++Q
Sbjct: 70 KTPLQICEENRIIHKKIYDWFNIDFDFFGHTTSTAHTKNVQDFFNKIHNNGFFTEQEIEQ 129
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
+CD C+ FLADR V GTC F C Y A+GDQC+ CG + DL D KC +C + P I
Sbjct: 130 FFCDKCQIFLADRYVVGTCKF--CKYTDAKGDQCDGCGHTYKSLDLIDAKCTLCHSFPNI 187
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLK--WG 262
+ T HLF D ++KL++ N S WS+N Q T +WL + L RC+TRDLK WG
Sbjct: 188 KSTRHLFFDFNNFKDKLQKLFNTNS--QYWSENGKQITKSWLDQELLPRCMTRDLKNRWG 245
Query: 263 VPVPLERFKEKVFYVWFDAPIGYVSITSCYT---NEWEQWWKNP--------ENVELYQF 311
VPVPL+ F+EKVFYVWFDA IGY + Y +E ++ KN ++ EL QF
Sbjct: 246 VPVPLKDFEEKVFYVWFDAVIGYFTFYKEYVAARSESKELDKNNVFATDNILQDCELVQF 305
Query: 312 MGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTN 371
MGKDNV FHT++FPS + T +++ L+K +SVTE+L +E+ KFSKS+G G+FG D D
Sbjct: 306 MGKDNVFFHTIVFPSLIFATNDSYPLIKKLSVTEFLLFENEKFSKSRGHGIFGLDLVDNT 365
Query: 372 IPVE-VWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYG 430
+ +WRYYL RPE D+ F++ + +L NN+GNF NRVL +I K
Sbjct: 366 MGQSCLWRYYLAKIRPEKCDSNFSFTHFTNVIDADLNNNIGNFCNRVLKYI-KNKNDKLI 424
Query: 431 SIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQ 490
SI + + + + K ++YL + +++++ L+ + IS GN Y+Q+
Sbjct: 425 SI------DKLEHRDDLMVQTIDKIYKEYLTSFSAIRIREALEKILEISKVGNEYVQQVV 478
Query: 491 FWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKG 550
K+ + P + + +V L+ LLEPF+P + EK + +C+ K
Sbjct: 479 SSKI---EVPKG---FQVAFSIVVLIGQLLEPFIP-----------VSSEKLLKMCNRKK 521
Query: 551 DVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVE 584
+ + II + PLF +L D +E
Sbjct: 522 --ENFCESFYIIKSAEIGDDIKPLFNKLDDSLIE 553
>sp|Q9YCY3|SYM_AERPE Methionine--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=metG PE=3
SV=1
Length = 572
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/567 (38%), Positives = 325/567 (57%), Gaps = 29/567 (5%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++TSA PYVN+VPHLG +IGSVLSAD++AR+ RLRG +++ G+DE+GT E +A +
Sbjct: 5 VVTSAWPYVNHVPHLGTLIGSVLSADIYARYLRLRGRQVVFVSGSDEHGTPIELEARKKG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
PKE+ D+ H +++ + ISFDN+ RT +P E KKL +N ++
Sbjct: 65 VHPKELTDQVHEYDVKMWREYRISFDNYSRTESPVHKEFVMEFMKKLEENGYIFSQEEVL 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
PYC+ K FL DR VEGTCP+ C YE ARGDQC+ CG+LL+ T+LK+P+C +C + P
Sbjct: 125 PYCERDKIFLPDRFVEGTCPY--CGYEKARGDQCDECGRLLHPTELKNPRCALCGSKPVY 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+ T H F+DL ++++L +++ + G + + + W+ +GLK R +TRDL WGVP
Sbjct: 183 KSTRHWFIDLRRVQDRLLKWLESH---GELQDSVKKYSINWVAQGLKPRSVTRDLSWGVP 239
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCY-------TNEWEQWWKNPENVELYQFMGKDNV 317
P + + K YVWFDA +GYVS T EW+ WW + +Y F+GKDN+
Sbjct: 240 APFKGAEGKTIYVWFDALLGYVSATKELFIMRRGDPEEWKSWWWDSGTRTVY-FIGKDNI 298
Query: 318 PFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVW 377
PFH ++ P+ L + + + L IS TEYL YE +FSKS+ IGV+ ++A + P + W
Sbjct: 299 PFHAIILPALFLASHDPYVLPWRISATEYLMYEGQQFSKSRRIGVWIDEALEIA-PADYW 357
Query: 378 RYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDAN 437
R+ L RPE DT FTW + N EL +++GNF+NRVLS + + P+
Sbjct: 358 RWALARMRPEARDTNFTWKEFYRIVNTELNDDIGNFVNRVLSLVR----SRMSGVAPEPE 413
Query: 438 GAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKE 497
HQ E+V + E +E +++K+ + + I+ EGNAYL +Q WKL +
Sbjct: 414 DLGEHQ---GFVERVRRAAWAVAEDLEAIRIKRATEGILEIAREGNAYLNRTQPWKLLSQ 470
Query: 498 DQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARR 557
D+ + ++ V LA LL PF P + + L L H ++ DE D R
Sbjct: 471 DREEGVRALSAALYAVKTLAHLLAPFTPDAADRLWSMLGLAGSVHEAVWDEWLD-----R 525
Query: 558 PWEIIPAGHKIGSPNPLFKELKDDEVE 584
P +P G +I PLF++L DD +E
Sbjct: 526 P---LPGGARIVRVEPLFQKLPDDFLE 549
>sp|A2BLU2|SYM_HYPBU Methionine--tRNA ligase OS=Hyperthermus butylicus (strain DSM 5456
/ JCM 9403) GN=metG PE=3 SV=1
Length = 572
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/561 (39%), Positives = 329/561 (58%), Gaps = 29/561 (5%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++ SA PYVN++PHLGN+IGS+LSADVFAR+ RL+G + +++ G+DE+GT E +A+
Sbjct: 5 IVASAWPYVNSIPHLGNLIGSILSADVFARYLRLKGEDVVFVSGSDEHGTPIEVEAIRRG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
PK++ D+ H K +++ F ISFDN+ RT P E + KL N ++ E
Sbjct: 65 VHPKQLTDQAHEYVKKLFEEFRISFDNYTRTENPVHKEFVREFMMKLYQNGYIFEQDDVL 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
PYC K FL DR V GTCP+ C +E A GDQC+NCG+LL+ T+LK+P+C +C +
Sbjct: 125 PYCPRDKMFLPDRFVVGTCPY--CGFEKAYGDQCDNCGRLLHPTELKNPRCSICGGPVEF 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
R + H F +LP L+ K+E+++ ++ N + LKEGLK R +TRD KWG+P
Sbjct: 183 RKSKHWFFNLPKLQEKVEKWLRESNL----PPNVKNYSLNMLKEGLKPRSVTRDNKWGIP 238
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTNE------WEQWWKNPENVELYQFMGKDNVP 318
P + K YVWFDA +GY+S T Y + W+++W NPE +Y F+GKDN+P
Sbjct: 239 APFPGAEGKTIYVWFDALLGYISATKEYGLKKGDPELWKKYWFNPETKTVY-FIGKDNIP 297
Query: 319 FHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWR 378
FH ++ P+ L+G+G+ + L IS TEYL YE +FSKS+ G++ ++A + +P + WR
Sbjct: 298 FHAIILPAMLIGSGDPYVLPSYISATEYLMYEGEQFSKSRRWGIWIDEALEI-LPADYWR 356
Query: 379 YYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANG 438
+ L+ RPE DT FTW++ N E+ +++GN+++RVL FI +GS+VP+
Sbjct: 357 FALIRMRPEAKDTNFTWSEFLRIVNTEMNDDIGNYVHRVLRFIE----SKFGSVVPEPGS 412
Query: 439 -AESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKE 497
+++ + + + + E+Y E+V+LKQ L + ++ +GN YL W K
Sbjct: 413 YSDADKEFEKAIRETPRRAEKYF---EEVRLKQALGEVIELARKGNQYLNTKAPWDKIKT 469
Query: 498 DQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARR 557
D + M +V V LA LL PF P + + K LNL H E G +A
Sbjct: 470 DPKDAATTMYLAVNSVATLAILLAPFTPDSAERLWKMLNLPGSVH-----EPGRWKQAGE 524
Query: 558 PWEIIPAGHKIGSPNPLFKEL 578
II GH+IG P LF++L
Sbjct: 525 --MIIKPGHRIGKPEQLFRKL 543
>sp|Q0C161|SYM_HYPNA Methionine--tRNA ligase OS=Hyphomonas neptunium (strain ATCC 15444)
GN=metG PE=3 SV=1
Length = 579
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/591 (39%), Positives = 339/591 (57%), Gaps = 33/591 (5%)
Query: 21 KRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKA 80
+R ILITSALPY+N V HLGN+ GS+L ADV+AR RL+G++ YIC TDE+GT E A
Sbjct: 4 QRRILITSALPYINGVKHLGNLAGSMLPADVYARVMRLQGHDVTYICATDEHGTPAELAA 63
Query: 81 MEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIEN 140
S + CD+ + + + + F++SFD FGRTS P Q + ++L N +
Sbjct: 64 QATGQSVQAYCDEQYEVQRKAGEGFNLSFDWFGRTSRPANHTLTQHLAQQLEKNGLIEVR 123
Query: 141 TMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKV--C 198
T +Q Y RFL DR VEGTCP C YE ARGDQC+NCG+LL+ DL +P V
Sbjct: 124 TSKQVYAVDDGRFLPDRYVEGTCPH--CGYEKARGDQCDNCGRLLDPVDLINPYSAVSGS 181
Query: 199 RNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRD 258
RN +IRDT+HL+L +++++ +++N + +W A+ + WL EGL R I+RD
Sbjct: 182 RNI-EIRDTDHLYLLQTGMQDRIRDWVN--AKGKNWPSLAVSIANKWLDEGLIARSISRD 238
Query: 259 LKWGVPV------PLERFKEKVFYVWFDAPIGYVSITSCYT----NEWEQWW---KNPEN 305
L WGV V P F+ KVFYVWFDAPIGY+S T + N+WE+ W K +
Sbjct: 239 LSWGVKVTDADGNPRPGFENKVFYVWFDAPIGYISATQEWAEATGNDWEKLWLTDKGADQ 298
Query: 306 VELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGN 365
E QFMGKDNV FHTV FP TLLG+GE W + + ++ + GKFS S+ GVF +
Sbjct: 299 TEYVQFMGKDNVAFHTVSFPVTLLGSGEPWKTVDKLKAFNWVTWYGGKFSTSQKRGVFMD 358
Query: 366 DAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPP 425
A +P + WR+YL++N PE SD FTW QA N++L N LGNFINR+ + A
Sbjct: 359 QALSL-LPSDYWRWYLISNAPEGSDAAFTWEGFQAAVNSDLANVLGNFINRITKYCASK- 416
Query: 426 GQGYGSIVPD--ANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGN 483
+ +P+ +G + LAE++ + +E Y EAME ++ +I + GN
Sbjct: 417 ---FEGKIPETGTSGDAEAWMANELAERLPRLIEFY-EAME---FRKAAAETRAIWAAGN 469
Query: 484 AYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHI 543
YL +++ W YK D ++ +R + L + + +P +P + ++ L + PE++
Sbjct: 470 EYLTKAEPWVKYKNDVDGAAVGVRAGINLAAIFGIIAQPIIPDAAKKILDALGI-PEENR 528
Query: 544 SLCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQ 594
+ D A + IP GH I P+ LF++++D +VE + ++F G +
Sbjct: 529 KMPAGSKPEDFAALL-DAIPRGHAISPPDVLFQKIEDSQVEEWTAQFGGGK 578
>sp|Q3J0T3|SYM_RHOS4 Methionine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=metG PE=3 SV=1
Length = 572
Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/596 (37%), Positives = 342/596 (57%), Gaps = 49/596 (8%)
Query: 23 NILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAME 82
ILITSA+PY+N + HLGN++GS L AD++AR+ R RG+ ++IC TDE+GT E A +
Sbjct: 3 RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62
Query: 83 DNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTM 142
++ C + H + K++ F +SFD+FGR+S+ + Q L +N ++ E
Sbjct: 63 AGKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVE 122
Query: 143 QQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP 202
+Q + RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL DP+ + +
Sbjct: 123 RQFFSVADNRFLPDRYIEGTCP--NCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTE 180
Query: 203 -QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDL 259
++R+T HL+L AL++++E +I++ + W WL EGL+ R ITRDL
Sbjct: 181 LELRETKHLYLRQRALKDEIEAWIDSKT---DWPVLTTSIAKKWLHDGEGLQDRGITRDL 237
Query: 260 KWGVPV-----PLERFKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWW---KNPE 304
KWGVPV P + KVFYVWFDAPI Y++ T+ + + +WE+WW + E
Sbjct: 238 KWGVPVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKADADWERWWRTDRGAE 297
Query: 305 NVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFG 364
+V QFMGKDNVPFHT+ FP+T++G+ E W L+ I YLNY+ G+FS S+G GVF
Sbjct: 298 DVRYVQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFM 357
Query: 365 NDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKP 424
+ A +P + WR++LL++ PE SD+ FTW + Q+ N +L + LGN ++RV F
Sbjct: 358 DQALSI-LPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSK 416
Query: 425 PGQGYGSIVPDAN--GAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEG 482
+G VP G HQL L +++ Y E +EAME K L+ ++ G
Sbjct: 417 ----FGETVPAGGSPGEREHQLVAELQQRLAAY-EACMEAMEVRKAASELR---ALWVAG 468
Query: 483 NAYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKH 542
N YLQ + W + K D ++R ++ L+ L A + PF+P + + L
Sbjct: 469 NEYLQSAAPWTVVKTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMASLG------ 522
Query: 543 ISLCDE---KGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQA 595
C++ DV RA E++PAGH +P LF+++ D+E ++++F+G ++
Sbjct: 523 ---CEDWSWPADVGRAL---EVLPAGHGFTTPEVLFRKITDEERAEWQTRFSGVRS 572
>sp|A3PLG8|SYM_RHOS1 Methionine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=metG PE=3 SV=1
Length = 572
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/596 (37%), Positives = 342/596 (57%), Gaps = 49/596 (8%)
Query: 23 NILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAME 82
ILITSA+PY+N + HLGN++GS L AD++AR+ R RG+ ++IC TDE+GT E A +
Sbjct: 3 RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62
Query: 83 DNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTM 142
++ C + H + K++ F +SFD+FGR+S+ + Q L +N ++ E
Sbjct: 63 AGKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVE 122
Query: 143 QQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP 202
+Q + RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL DP+ + +
Sbjct: 123 RQFFSVADNRFLPDRYIEGTCP--NCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTE 180
Query: 203 -QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDL 259
++R+T HL+L AL++++E +I++ + W WL EGL+ R ITRDL
Sbjct: 181 LELRETKHLYLRQRALKDEIEAWIDSKT---DWPVLTTSIAKKWLHDGEGLQDRGITRDL 237
Query: 260 KWGVPV-----PLERFKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWWKN---PE 304
KWGVPV P + KVFYVWFDAPI Y++ T+ + + +WE+WW+ E
Sbjct: 238 KWGVPVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKTDADWERWWRTDRGAE 297
Query: 305 NVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFG 364
+V QFMGKDNVPFHT+ FP+T++G+ E W L+ I YLNY+ G+FS S+G GVF
Sbjct: 298 DVRYVQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFM 357
Query: 365 NDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKP 424
+ A +P + WR++LL++ PE SD+ FTW + Q+ N +L + LGN ++RV F
Sbjct: 358 DQALSI-LPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSK 416
Query: 425 PGQGYGSIVPDAN--GAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEG 482
+G VP G HQL L +++ Y E +EAME K L+ ++ G
Sbjct: 417 ----FGETVPAGGSPGEREHQLVAELQQRLAAY-EACMEAMEVRKAASELR---ALWVAG 468
Query: 483 NAYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKH 542
N YLQ + W + K D ++R ++ L+ L A + PF+P + + L
Sbjct: 469 NEYLQSAAPWTVVKTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMTSLG------ 522
Query: 543 ISLCDE---KGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQA 595
C++ DV RA E++PAGH +P LF+++ D+E ++++F+G ++
Sbjct: 523 ---CEDWSWPADVGRAL---EVLPAGHGFTTPEVLFRKITDEERAEWQTRFSGVRS 572
>sp|A8LIJ9|SYM_DINSH Methionine--tRNA ligase OS=Dinoroseobacter shibae (strain DFL 12)
GN=metG PE=3 SV=1
Length = 572
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/592 (38%), Positives = 332/592 (56%), Gaps = 43/592 (7%)
Query: 23 NILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAME 82
ILITSA+PY+N + HLGN++GS L AD++AR+ R RG+ ++IC TDE+GT E A +
Sbjct: 3 RILITSAIPYINGIKHLGNLVGSQLPADLYARYARARGHEVMFICATDEHGTPAELAAAK 62
Query: 83 DNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTM 142
E C + H + D+ K F +SFD+FGR+S+ + Q KL +N + E +
Sbjct: 63 AGKPVAEYCAEMHAVQSDIAKRFGLSFDHFGRSSSERNKALTQYFAGKLAENGLIEEVSE 122
Query: 143 QQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP 202
+Q Y RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL DP+ + +
Sbjct: 123 KQVYSHADGRFLPDRYIEGTCP--NCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTD 180
Query: 203 -QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDL 259
++R+T HL+L AL+++L+ +I++ + W WL +GL+ R ITRDL
Sbjct: 181 LEVRETKHLYLRQSALKDQLDAWIDSKT---DWPILTTSIAKKWLHDGDGLQDRGITRDL 237
Query: 260 KWGVPVP-----LERFKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWW---KNPE 304
WGVPV + KVFYVWFDAPI Y++ T+ + + WE+WW K +
Sbjct: 238 DWGVPVKKGTEDWPGMEGKVFYVWFDAPIEYIAGTAEWADANGLDDAAWERWWRTDKGAD 297
Query: 305 NVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFG 364
V QFMGKDNVPFHT+ FP+T++G+G+ W L+ I YL Y+ G+FS S+G GVF
Sbjct: 298 EVRYVQFMGKDNVPFHTLSFPATIMGSGDPWKLVDYIKSFNYLTYDGGQFSTSQGRGVFM 357
Query: 365 NDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKP 424
+ A + +P + WR++LL++ PE SD+ FTW + QA N +L + LGNF +RV F
Sbjct: 358 DQALEI-LPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFASRVTKFCRSK 416
Query: 425 PGQGYGSIVP--DANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEG 482
YG VP A G L L K+ Y E +++AME K L+ +I G
Sbjct: 417 ----YGEEVPAGGAYGPAEEALIAELTTKLRAY-EGHMDAMEVRKAAAELR---AIWVAG 468
Query: 483 NAYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKH 542
N YLQ + W ++K D + + ++R + LV A L +PF+P S + + + +
Sbjct: 469 NEYLQAAAPWSVFKTDPDAAAAIIRLGLNLVRFYAVLSQPFIPDASAALLRAMKAED--- 525
Query: 543 ISLCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQ 594
GDV A +PAGH P F ++ D + E + KF+G++
Sbjct: 526 ---AGWPGDVAEAL---AALPAGHAFAVPEVTFAKISDADREAWAEKFSGTR 571
>sp|B9KKH3|SYM_RHOSK Methionine--tRNA ligase OS=Rhodobacter sphaeroides (strain KD131 /
KCTC 12085) GN=metG PE=3 SV=1
Length = 572
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/593 (37%), Positives = 339/593 (57%), Gaps = 49/593 (8%)
Query: 23 NILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAME 82
ILITSA+PY+N + HLGN++GS L AD++AR+ R RG+ ++IC TDE+GT E A +
Sbjct: 3 RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62
Query: 83 DNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTM 142
++ C + H + K++ F +SFD+FGR+S+ + Q L +N ++ E
Sbjct: 63 AGKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVE 122
Query: 143 QQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP 202
+Q + RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL DP+ + +
Sbjct: 123 RQFFSVADNRFLPDRYIEGTCP--NCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTE 180
Query: 203 -QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDL 259
++R+T HL+L AL++++E +I++ + W WL EGL+ R ITRDL
Sbjct: 181 LELRETKHLYLRQRALKDEIEAWIDSKT---DWPVLTTSIAKKWLHDGEGLQDRGITRDL 237
Query: 260 KWGVPV-----PLERFKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWW---KNPE 304
KWGVPV P + KVFYVWFDAPI Y++ T+ + + +WE+WW + E
Sbjct: 238 KWGVPVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKADADWERWWRTDRGAE 297
Query: 305 NVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFG 364
+V QFMGKDNVPFHT+ FP+T++G+ E W L+ I YLNY+ G+FS S+G GVF
Sbjct: 298 DVRYVQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFM 357
Query: 365 NDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKP 424
+ A +P + WR++LL++ PE SD+ FTW + Q+ N +L + LGN ++RV F
Sbjct: 358 DQALSI-LPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSK 416
Query: 425 PGQGYGSIVPDAN--GAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEG 482
+G VP G HQL L +++ Y E +EAME K L+ ++ G
Sbjct: 417 ----FGETVPAGGSPGEREHQLVAELQQQLAAY-ETCMEAMEVRKAAAELR---ALWVAG 468
Query: 483 NAYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKH 542
N YLQ + W + K D ++R ++ L+ L A + PF+P + + L
Sbjct: 469 NEYLQSAAPWTVVKTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMASLG------ 522
Query: 543 ISLCDE---KGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAG 592
C++ DV RA E++P GH +P LF+++ D+E ++++F+G
Sbjct: 523 ---CEDWSWPADVGRAL---EVLPPGHGFTTPEVLFRKITDEERAEWQTRFSG 569
>sp|A4WV24|SYM_RHOS5 Methionine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=metG PE=3 SV=1
Length = 572
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/590 (38%), Positives = 335/590 (56%), Gaps = 43/590 (7%)
Query: 23 NILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAME 82
ILITSA+PY+N + HLGN++GS L AD++AR+ R RG+ ++IC TDE+GT E A +
Sbjct: 3 RILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAK 62
Query: 83 DNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTM 142
+ C + H I K++ F +SFD+FGR+S+ + Q +L +N ++ E +
Sbjct: 63 AGKPVEVYCAEMHEIQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGQLAENGFIEEVSE 122
Query: 143 QQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP 202
+Q + RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL +P+ + +
Sbjct: 123 RQVFSVADNRFLPDRYIEGTCP--NCGYDKARGDQCENCTKQLDPTDLINPRSAISGSTD 180
Query: 203 -QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDL 259
++R+T HL+L AL++++E +I++ + W WL EGL+ R ITRDL
Sbjct: 181 LEVRETKHLYLRQRALKDEIEAWIDSKT---DWPVLTTSIAKKWLHDGEGLQDRGITRDL 237
Query: 260 KWGVPV-----PLERFKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWW---KNPE 304
WGVPV P + KVFYVWFDAPI Y++ T+ + + +WE+WW K
Sbjct: 238 HWGVPVKKGDQPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKTEADWERWWRTDKGAG 297
Query: 305 NVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFG 364
+V QFMGKDNVPFHT+ FP+T++G+ E W L+ I YLNY+ G+FS S+G GVF
Sbjct: 298 DVRYVQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFM 357
Query: 365 NDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKP 424
+ A +P + WR++LL++ PE SD+ FTW + QA N +L + LGN ++RV F
Sbjct: 358 DQALSI-LPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNLVSRVTKFCRSK 416
Query: 425 PGQGYGSIVP--DANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEG 482
+G VP A G HQL L E++ Y E +EAME K L+ ++ G
Sbjct: 417 ----FGETVPAGGAFGEREHQLIAELQERLAAY-ESCMEAMEIRKAATELR---ALWVAG 468
Query: 483 NAYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKH 542
N YLQ + W + K D ++R S+ L+ L A + PF+P + L
Sbjct: 469 NEYLQSAAPWTVVKTDPERAQAMIRLSLNLIRLYAVISRPFIPDAAASTMASLG------ 522
Query: 543 ISLCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAG 592
CD+ E +PAGH +P+ LF+++ D+E ++++FAG
Sbjct: 523 ---CDDWSWPTDVAAALERLPAGHAFTTPDVLFRKITDEERAEWQTRFAG 569
>sp|Q8U221|SYM_PYRFU Methionine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=metG PE=3 SV=1
Length = 724
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/611 (36%), Positives = 329/611 (53%), Gaps = 44/611 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++T+ALPY N H G++ G+ L AD+F R+ RL+G + ++ICGTDE+GT +A+ +
Sbjct: 5 MVTAALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALNEK 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP+EI D++H K ++ ISFD FGRT P Q F K L+N +L++ +Q
Sbjct: 65 RSPREIVDEFHEHIKTAFQRVKISFDYFGRTELPVHYRLSQEFFLKALENGYLVKKVTKQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ KRFL DR V GTCP+ C E+ RGDQCE CG+ L L +P+C C+N
Sbjct: 125 AYCEHDKRFLPDRFVIGTCPY--CGAENQRGDQCEVCGRPLTPEILIEPRCAFCKNPITF 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
R++ H ++ + KL+E+I W N W++EGL+ R ITRDL WG+P
Sbjct: 183 RESTHYYIKMQEFEEKLKEWIKE----KDWKPNVKNMVLGWIEEGLEERAITRDLDWGIP 238
Query: 265 VPL--ERFKEKVFYVWFDAPIGYVSITSCY------TNEWEQWWKNPE-NVELYQFMGKD 315
VPL E K KV YVWF+APIGY+S+T Y NEW+++W N + + F+GKD
Sbjct: 239 VPLDEEDMKNKVLYVWFEAPIGYISLTIEYFKRIGKPNEWKKYWLNLDGQTRVIHFIGKD 298
Query: 316 NVPFHTVMFPSTLLGTGE--------NWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDA 367
N+PFH + +P+ L+ G+ W L I EYL E KFS S+ ++ ++
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWIHEF 358
Query: 368 KDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQ 427
D P + RYYL + PE D+ F++A+ + K N EL+N LGNF+ R L+F+ +
Sbjct: 359 LDV-FPADYLRYYLTSIMPETRDSDFSFAEFKTKINEELVNVLGNFVYRALTFV----NR 413
Query: 428 GYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQ 487
+ IVP+ E +L + E++ K E+ + + + + K LK M+++ GN Y
Sbjct: 414 YFDGIVPER--GELDELDRQALEEIEKTFEEVGKLIREYRFKDALKKVMNLAGFGNRYFD 471
Query: 488 ESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCD 547
+ WK KED+ + S+ +V L LLEPF+P S ++ LNL+ K +
Sbjct: 472 YKEPWKTIKEDKTRTGTTINISLQIVKALGILLEPFLPDASEKIWHFLNLEEVKTWRFTE 531
Query: 548 EKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAK 607
+PAGHK+ P LFK+ DD++ +F + G R E
Sbjct: 532 --------------LPAGHKVRKPEILFKKASDDQIIYFILNYMGRNNPDAARELLEKYY 577
Query: 608 TAEQLKKTKIS 618
E ++K I
Sbjct: 578 KLEDVEKVAIE 588
>sp|Q5LTL1|SYM_RUEPO Methionine--tRNA ligase OS=Ruegeria pomeroyi (strain ATCC 700808 /
DSM 15171 / DSS-3) GN=metG PE=3 SV=1
Length = 572
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/592 (38%), Positives = 340/592 (57%), Gaps = 43/592 (7%)
Query: 24 ILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMED 83
ILITSA+PY+N + HLGN++GS L AD++AR+ R RG +++C TDE+GT E A +
Sbjct: 4 ILITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGNEVMFLCATDEHGTPAELAAAKA 63
Query: 84 NCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQ 143
E C + H + D+ + F +SFD+FGR+S+ Q + Q KL +N+ + E + +
Sbjct: 64 GKPVAEYCAEMHGVQADIARRFGLSFDHFGRSSSAQNHKLTQHFAGKLAENDLIREVSER 123
Query: 144 QPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP- 202
Q Y + RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL +P+ + +
Sbjct: 124 QVYSNADGRFLPDRYIEGTCP--NCGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDL 181
Query: 203 QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDLK 260
++R+T HL+L AL+++L+ +I++ + W WL +GL+ R ITRDL
Sbjct: 182 EVRETKHLYLRQSALKDQLDAWIDSKA---DWPVLTTSIAKKWLHDGDGLQDRGITRDLD 238
Query: 261 WGVPVPLER-----FKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWW---KNPEN 305
WG+PV + KVFYVWFDAPI Y++ + EWE+WW K ++
Sbjct: 239 WGIPVKKGEQDWPGMEGKVFYVWFDAPIEYIACAGEWAEAHGKSDAEWERWWRTDKGADD 298
Query: 306 VELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGN 365
V QFMGKDNVPFHT+ FP+TL+G+GE W ++ + YLNY+ G+FS S+G GVF +
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATLIGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMD 358
Query: 366 DAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPP 425
A + +P + WR++LL++ PE SD+ FTW + QA N +L + LGNF++R+ F
Sbjct: 359 QALEI-LPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFVSRITKFCRSK- 416
Query: 426 GQGYGSIVPD--ANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGN 483
+G VP+ A G + L L ++ Y E ++EAME K Q L+ +I + GN
Sbjct: 417 ---FGEEVPEGGAYGPQEEALIAELTTRLRAY-EGHMEAMEVRKSAQELR---AIWAAGN 469
Query: 484 AYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHI 543
YLQ + W L+K D + +R + L+ L A L PF+P+ S + + +
Sbjct: 470 EYLQSAAPWTLFKTDPVQAAAQVRLGLNLIRLYAVLSAPFIPAASARMLEAMQ------- 522
Query: 544 SLCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQA 595
D+ VD A + P GH P LF ++ D++ E ++ +FAG ++
Sbjct: 523 -TSDDNWPVDIATALNALAP-GHAFTVPEVLFAKISDEDREGWQQRFAGVRS 572
>sp|Q0ANL8|SYM_MARMM Methionine--tRNA ligase OS=Maricaulis maris (strain MCS10) GN=metG
PE=3 SV=1
Length = 572
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/594 (38%), Positives = 324/594 (54%), Gaps = 52/594 (8%)
Query: 24 ILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMED 83
ILITSALPY+N V HLGN+ GS+L ADV+ARF RLRG++ +Y+C TDE+GT E A
Sbjct: 4 ILITSALPYINGVKHLGNLAGSMLPADVYARFQRLRGHDVLYVCATDEHGTPAELAADAA 63
Query: 84 NCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQ 143
+ CD+ H I K + F +S+D FGRTS Q + L + + E +
Sbjct: 64 GMDVRAYCDEQHDIQKRSGEGFSLSYDYFGRTSNAPNIRLTQHFAQVLEEKGLIAERVEE 123
Query: 144 QPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP- 202
Q + RFL DR VEGTCP C +E ARGDQC+NCG+LL TDLK+P K+ +
Sbjct: 124 QVFSIDDDRFLPDRYVEGTCPH--CGFERARGDQCDNCGRLLEPTDLKEPYSKISGSKNL 181
Query: 203 QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWG 262
++R+T HL L + K+ ++++ + W A + WL EGL+ R ITRDLKWG
Sbjct: 182 EVRETKHLHLVQTQMETKIRDWVDAST---EWPSLAKSIAYKWLDEGLRDRSITRDLKWG 238
Query: 263 VPV-----PLERFKEKVFYVWFDAPIGYVSITSCYT----NEWEQWW---KNPENVELYQ 310
VPV P E F+ KVFYVWFDAPIGY+ T + +WE WW K ++V Q
Sbjct: 239 VPVAQDGTPREGFEGKVFYVWFDAPIGYIGATVEWAEAGGGDWESWWRTDKGADDVTYVQ 298
Query: 311 FMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDT 370
FMGKDNV FHTV FP+T+LG+ E W + + +L + GKFS S+ GVF + A D
Sbjct: 299 FMGKDNVAFHTVSFPATILGSEEPWKTVDKLKAFNWLTWYGGKFSTSEKRGVFMDQALDI 358
Query: 371 NIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSF-IAKPPGQGY 429
+P + WR+YL N PE SD FTW Q N++L N LGNF+NR+ + ++K G
Sbjct: 359 -LPGDYWRWYLTANAPEGSDAAFTWEHFQGLINSDLANVLGNFVNRITKYTVSKFDGTLP 417
Query: 430 GSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQES 489
+ P N A +A ++ + + + ME ++ ++ +I + GN YL ++
Sbjct: 418 SAGTPGENEA-------WMAAELDQRLPALVANMEAMEFRKAAAEVRAIWAAGNEYLTKA 470
Query: 490 QFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEK 549
+ W YK D + ++ +RT + LV L L +PF+P + ++ L + +
Sbjct: 471 EPWVKYKSDVDAAAVGVRTGLNLVALFGILAQPFIPEAASKILDALGVPDD--------- 521
Query: 550 GDVDRARRPWEI----------IPAGHKIGSPNPLFKELKDDEVEFFRSKFAGS 593
RR WE +P G I P LF +++D +V + +F G+
Sbjct: 522 ------RRSWEFDGPASALLDALPHGMAITPPAVLFAKIEDAQVAEWTERFGGA 569
>sp|Q1GEI7|SYM_RUEST Methionine--tRNA ligase OS=Ruegeria sp. (strain TM1040) GN=metG
PE=3 SV=2
Length = 573
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/593 (37%), Positives = 339/593 (57%), Gaps = 43/593 (7%)
Query: 23 NILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAME 82
ILITSALPY+N + HLGN++GS L AD++AR+ R RG+ +++C TDE+GT E A +
Sbjct: 3 RILITSALPYINGIKHLGNLVGSQLPADLYARYNRGRGHEVMFLCATDEHGTPAELAAAK 62
Query: 83 DNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTM 142
+ C + H + D+ K F +SFD++GR+S+PQ Q KL + + E +
Sbjct: 63 AGKPVADYCAEMHAVQADIAKRFGLSFDHYGRSSSPQNHALTQHFAGKLEEAGLITEVSE 122
Query: 143 QQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP 202
+Q Y + RFL DR +EGTCP C +E ARGDQCE C K L+ TDL +P+ + +
Sbjct: 123 KQVYSNADGRFLPDRYIEGTCP--NCGFEKARGDQCEECTKQLDPTDLINPRSAISGSTD 180
Query: 203 -QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDL 259
++R+T HLFL A+R++L+++I++ + W WL +GL+ R ITRDL
Sbjct: 181 LEVRETKHLFLRQSAMRDQLDQWIDSKT---DWPVLTTSIAKKWLHDGDGLQDRGITRDL 237
Query: 260 KWGVPVP-----LERFKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWW---KNPE 304
WG+ V + KVFYVWFDAPI Y++ + +WE+WW K +
Sbjct: 238 DWGIAVKKGDADWPGMEGKVFYVWFDAPIEYIAAAGEWAEAHGKTDADWERWWRTDKGAD 297
Query: 305 NVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFG 364
+V+ QFMGKDNVPFHT+ FP+TLLG+GE W ++ + YLNY+ G+FS S+G GVF
Sbjct: 298 DVKYVQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFM 357
Query: 365 NDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKP 424
+ A + +P + WR++LL++ PE SD+ FTW + Q N +L + LGNF++R+ F
Sbjct: 358 DQALEI-LPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK 416
Query: 425 PGQGYGSIVPDAN--GAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEG 482
+G VPD G + L + L+ ++G + E+++EAME K Q L+ +I G
Sbjct: 417 ----FGEEVPDGGTWGEQEQTLIEELSTRIGAF-ERHMEAMEVRKSAQELR---AIWVAG 468
Query: 483 NAYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKH 542
N YLQ + W ++KED + +R + L+ L A L PF+P S + L
Sbjct: 469 NEYLQSAAPWSVFKEDPERAAGQVRLGLNLIRLYAVLSAPFIPDASDRLFAALG------ 522
Query: 543 ISLCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQA 595
+++ + +PAGH P LF ++ D++ E ++ +FAG ++
Sbjct: 523 ---TEDRSWPEDVAAALAALPAGHAFTVPEVLFAKITDEQREEWQERFAGGRS 572
>sp|B0T3J0|SYM_CAUSK Methionine--tRNA ligase OS=Caulobacter sp. (strain K31) GN=metG
PE=3 SV=1
Length = 569
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/587 (37%), Positives = 326/587 (55%), Gaps = 35/587 (5%)
Query: 23 NILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAME 82
ILITSALPY+N V HLGN+ GS+L ADV+ARF R RG + +YIC TDE+GT E A
Sbjct: 3 RILITSALPYINGVKHLGNLAGSMLPADVYARFQRARGNDTLYICATDEHGTPAELAAAA 62
Query: 83 DNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTM 142
E C + HV+ DV + F +S+D+FGR+S+PQ Q + L + + E
Sbjct: 63 AGQDVAEYCAEQHVLQHDVGRAFGLSWDHFGRSSSPQNHRLTQHFCEVLEERGLIEERVD 122
Query: 143 QQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKV--CRN 200
Q Y RFL DR +EGTCP C ++ ARGDQC+NCG LL+ T+LKDP + RN
Sbjct: 123 QMVYSIDDARFLPDRYIEGTCPH--CGFDKARGDQCDNCGNLLDPTELKDPYSVISGSRN 180
Query: 201 APQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLK 260
++RDT HL+L + +K+ +I++ W A + L EGL R ITRDL
Sbjct: 181 L-EVRDTRHLYLLQTKMADKIRAWIDSHP---DWQLLAKSIAYKHLDEGLIDRGITRDLA 236
Query: 261 WGVPV-----PLERFKEKVFYVWFDAPIGYVSITSCYTNE-----WEQWWKNPE---NVE 307
WG+PV P F++KVFYVWFDAPI Y++ T + +E W+ WW+ E +V
Sbjct: 237 WGIPVTKGEFPRPGFEDKVFYVWFDAPIEYIAATQEWADEGAGRDWKSWWRTDEGADDVR 296
Query: 308 LYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDA 367
QFMGKDNV FHTV FP+T+LG+ E W + + +LN+ GKFS S GVF DA
Sbjct: 297 YVQFMGKDNVAFHTVSFPATILGSQEPWKSVDMLKAFNWLNWYGGKFSTSNKRGVF-MDA 355
Query: 368 KDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQ 427
+P + WR+YL +N PE SDT FTW + N +L + LGNF+NR+L F
Sbjct: 356 ALEILPPDFWRWYLTSNAPESSDTAFTWEQFASAVNRDLADVLGNFVNRILKFTEGK--- 412
Query: 428 GYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQ 487
+ ++PD G L + L V + E M+ V++++ + ++ GN YLQ
Sbjct: 413 -FDGVIPD--GGAPGPLEEKLYADVSARLADLTEQMDAVEVRKSAQALRALWVVGNEYLQ 469
Query: 488 ESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCD 547
E+ W K D+ ++++RT++ L L A + PF+P + ++ + L D
Sbjct: 470 EAAPWTAIKTDRDRAAVIVRTALNLAALYARISAPFIPFAAEKIGEAFQLPWPPVWPTTD 529
Query: 548 EKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQ 594
++ +P G + +P LFK+++D+++ + +F G++
Sbjct: 530 AAAELSS-------LPVGLSVRAPEVLFKKIEDEQIAEWTRRFGGAE 569
>sp|Q9V011|SYM_PYRAB Methionine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=metG PE=1 SV=1
Length = 722
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/581 (37%), Positives = 322/581 (55%), Gaps = 48/581 (8%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++TSALPY N H G++ G+ L AD+F R+ RL+G + ++ICGTDE+GT +A+++
Sbjct: 5 MVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP+EI D++H K ++ ISFD FGRT P + Q F K +N L++ +Q
Sbjct: 65 RSPREIVDEFHEQIKITFQRAKISFDFFGRTELPIHYKLSQEFFLKAYENGHLVKKVTKQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ K FL DR V GTCP+ C E +GDQCE CG+ L L +P+C +C
Sbjct: 125 AYCEHDKMFLPDRFVIGTCPY--CGAEDQKGDQCEVCGRPLTPEILINPRCAICGRPISF 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
RD+ H ++ + +L+ +I W N +W++EGL+ R ITRDL WG+P
Sbjct: 183 RDSAHYYIKMQDFAERLKRWIEKQ----PWKPNVKNMVLSWIEEGLEERAITRDLNWGIP 238
Query: 265 VPL--ERFKEKVFYVWFDAPIGYVSITSCY------TNEWEQWWKNPE-NVELYQFMGKD 315
VPL E K KV YVWF+APIGY+SIT + NEW+++W N + + F+GKD
Sbjct: 239 VPLDEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKPNEWKKYWLNIDGQTRVIHFIGKD 298
Query: 316 NVPFHTVMFPSTLLGTGE--------NWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDA 367
N+PFH + +P+ L+ G+ W L I EYL E KFS S+ ++ ++
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEF 358
Query: 368 KDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQ 427
D P + RYYL T PE D+ F+++D + + N EL+NNLGNF++R L+F+ +
Sbjct: 359 LDV-FPADYLRYYLTTIMPETRDSDFSFSDFKVRINEELVNNLGNFVHRALTFV----NR 413
Query: 428 GYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQ 487
+ +VP+ E +L + E++ K ++ E + + K LK MS++S GN Y
Sbjct: 414 YFDGVVPER--GELDELDREALEEIEKAFKEVGELIMNYRFKDALKRVMSLASFGNRYFD 471
Query: 488 ESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCD 547
Q WK KED+ + S+ +V L LLEPF+P S ++ LNL
Sbjct: 472 HKQPWKTAKEDKVRTGTTVNISLQIVKALGILLEPFLPDASEKIWHLLNL---------- 521
Query: 548 EKGDVDRARRPWEI--IPAGHKIGSPNPLFKELKDDEVEFF 586
D +R WE +PAGHK+ P LFK++ DD++ +F
Sbjct: 522 -----DEVKR-WEFRELPAGHKVRKPEILFKKVTDDQIIYF 556
>sp|Q9A884|SYM_CAUCR Methionine--tRNA ligase OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=metG PE=3 SV=1
Length = 569
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/586 (37%), Positives = 327/586 (55%), Gaps = 35/586 (5%)
Query: 24 ILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMED 83
ILITSALPY+N + HLGN+ GS+L ADV+ARF R +G+ +YIC TDE+GT E A
Sbjct: 4 ILITSALPYINGIKHLGNLAGSMLPADVYARFKRAQGHETLYICATDEHGTPAELAAAAA 63
Query: 84 NCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQ 143
C + HV+ +V + F +S+D+FGR+S+PQ Q + L D+ + E Q
Sbjct: 64 GQDVATYCAEQHVLQHEVGRAFGLSWDHFGRSSSPQNHRLTQHFCQALEDHGLIEERVDQ 123
Query: 144 QPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKV--CRNA 201
Y KRFL DR VEGTCP C +E ARGDQC+NCG LL+ TDL DP + RN
Sbjct: 124 MVYSVDDKRFLPDRYVEGTCPH--CKFEKARGDQCDNCGNLLDPTDLIDPYSVISGSRNI 181
Query: 202 PQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKW 261
++RDT HL+L +++K+ +++ + W A + L EGL R ITRDL W
Sbjct: 182 -EVRDTKHLYLLQTKMQDKIRAWVDAHA---DWPPLARSIAYKHLDEGLIDRGITRDLAW 237
Query: 262 GVP-----VPLERFKEKVFYVWFDAPIGYVSITSCYT-----NEWEQWWKN---PENVEL 308
G+P VP F+EKVFYVWFDAPI Y++ T + +W++WW+ ++V
Sbjct: 238 GIPVAQDGVPRPGFEEKVFYVWFDAPIEYIAATQEWAEGSPDRDWKRWWRTDAGADDVRY 297
Query: 309 YQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAK 368
QFMGKDNV FHTV FP+T+LG+ E W + + +LN+ GKFS S GVF DA
Sbjct: 298 VQFMGKDNVAFHTVSFPATILGSEEPWKSVDMLKAFNWLNWYGGKFSTSNKRGVF-MDAA 356
Query: 369 DTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQG 428
+P ++WR+YL N PE SDT FTW + N +L + LGNF+NR+L F
Sbjct: 357 LEILPPDLWRWYLTANSPEGSDTAFTWEQFASAVNRDLADVLGNFVNRILKFNESK---- 412
Query: 429 YGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQE 488
+ +VP G E L + L V + E M+ +++++ + ++ GN YLQE
Sbjct: 413 FEGVVP--AGGEPGPLEEKLFADVSARLADLAEQMDAIEIRKSAQALRALWVVGNEYLQE 470
Query: 489 SQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDE 548
+ W K D+ ++++RT++ L L A + PF+P + ++ L D
Sbjct: 471 AAPWTAIKTDRDRAAVIVRTALNLAALYAKISAPFIPFAAEKIGDAFGLDFPASWPSNDA 530
Query: 549 KGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQ 594
K +++ + G I P LFK+++D+++ + ++F G++
Sbjct: 531 KAELN-------TLSVGRPITVPEVLFKKIEDEQIAEWTARFGGAE 569
>sp|B8H5U4|SYM_CAUCN Methionine--tRNA ligase OS=Caulobacter crescentus (strain NA1000 /
CB15N) GN=metG PE=3 SV=1
Length = 569
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/586 (37%), Positives = 327/586 (55%), Gaps = 35/586 (5%)
Query: 24 ILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMED 83
ILITSALPY+N + HLGN+ GS+L ADV+ARF R +G+ +YIC TDE+GT E A
Sbjct: 4 ILITSALPYINGIKHLGNLAGSMLPADVYARFKRAQGHETLYICATDEHGTPAELAAAAA 63
Query: 84 NCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQ 143
C + HV+ +V + F +S+D+FGR+S+PQ Q + L D+ + E Q
Sbjct: 64 GQDVATYCAEQHVLQHEVGRAFGLSWDHFGRSSSPQNHRLTQHFCQALEDHGLIEERVDQ 123
Query: 144 QPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKV--CRNA 201
Y KRFL DR VEGTCP C +E ARGDQC+NCG LL+ TDL DP + RN
Sbjct: 124 MVYSVDDKRFLPDRYVEGTCPH--CKFEKARGDQCDNCGNLLDPTDLIDPYSVISGSRNI 181
Query: 202 PQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKW 261
++RDT HL+L +++K+ +++ + W A + L EGL R ITRDL W
Sbjct: 182 -EVRDTKHLYLLQTKMQDKIRAWVDAHA---DWPPLARSIAYKHLDEGLIDRGITRDLAW 237
Query: 262 GVP-----VPLERFKEKVFYVWFDAPIGYVSITSCYT-----NEWEQWWKN---PENVEL 308
G+P VP F+EKVFYVWFDAPI Y++ T + +W++WW+ ++V
Sbjct: 238 GIPVAQDGVPRPGFEEKVFYVWFDAPIEYIAATQEWAEGSPDRDWKRWWRTDAGADDVRY 297
Query: 309 YQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAK 368
QFMGKDNV FHTV FP+T+LG+ E W + + +LN+ GKFS S GVF DA
Sbjct: 298 VQFMGKDNVAFHTVSFPATILGSEEPWKSVDMLKAFNWLNWYGGKFSTSNKRGVF-MDAA 356
Query: 369 DTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQG 428
+P ++WR+YL N PE SDT FTW + N +L + LGNF+NR+L F
Sbjct: 357 LEILPPDLWRWYLTANSPEGSDTAFTWEQFASAVNRDLADVLGNFVNRILKFNESK---- 412
Query: 429 YGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQE 488
+ +VP G E L + L V + E M+ +++++ + ++ GN YLQE
Sbjct: 413 FEGVVP--AGGEPGPLEEKLFADVSARLADLAEQMDAIEIRKSAQALRALWVVGNEYLQE 470
Query: 489 SQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDE 548
+ W K D+ ++++RT++ L L A + PF+P + ++ L D
Sbjct: 471 AAPWTAIKTDRDRAAVIVRTALNLAALYAKISAPFIPFAAEKIGDAFGLDFPASWPSNDA 530
Query: 549 KGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQ 594
K +++ + G I P LFK+++D+++ + ++F G++
Sbjct: 531 KAELN-------TLSVGRPITVPEVLFKKIEDEQIAEWTARFGGAE 569
>sp|O58721|SYM_PYRHO Methionine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=metG PE=3 SV=1
Length = 723
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/585 (36%), Positives = 321/585 (54%), Gaps = 44/585 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++TSALPY N H G++ G+ L AD+F R+ RL+G + ++ICGTDE+GT +A+++
Sbjct: 5 MVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP+EI D++H K ++ ISFD FGRT P + Q F K +N L++ +Q
Sbjct: 65 RSPREIVDEFHEHIKITFQRAKISFDFFGRTELPIHYKLSQQFFLKAYENGHLVKKVTKQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ K FL DR V GTCPF C E+ RGDQCE CG+ L L +P+C +C
Sbjct: 125 AYCEHDKMFLPDRFVIGTCPF--CGAENQRGDQCEVCGRPLTPEILINPRCALCGRPISF 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
R++ H ++ + KL+ +I N W N W++EGL+ R ITRDL WG+P
Sbjct: 183 RESAHYYIKMQDFAEKLKRWIENQ----PWKPNVKNMVLKWIEEGLEERAITRDLNWGIP 238
Query: 265 VPL--ERFKEKVFYVWFDAPIGYVSITSCY------TNEWEQWWKNPEN-VELYQFMGKD 315
VPL E K KV YVWF+APIGY+SIT Y NEW+++W N ++ + F+GKD
Sbjct: 239 VPLDEEDMKNKVLYVWFEAPIGYISITMEYFKRLGKPNEWKKYWLNIDSETRVIHFIGKD 298
Query: 316 NVPFHTVMFPSTLLGTGE--------NWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDA 367
N+PFH + +P+ L+ G+ W L I EYL E KFS S+ ++ ++
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEF 358
Query: 368 KDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQ 427
D P + RYYL T PE D+ F++A+ + + N EL+NNLGNF++R ++F+ +
Sbjct: 359 LDV-FPADYLRYYLTTIMPETRDSDFSFAEFKTRINEELVNNLGNFVHRAMTFV----NR 413
Query: 428 GYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQ 487
+ IVP+ E +L + E++ K E+ E + + K LK M ++S GN Y
Sbjct: 414 YFDGIVPER--GELDELDRQALEEIEKAFEEVGELIMNYRFKDALKRVMELASFGNKYFD 471
Query: 488 ESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCD 547
Q WK KED+ + S+ +V L LLEPF+P S ++ LNL K +
Sbjct: 472 HKQPWKTAKEDRARTGTTVNISLQIVKALGILLEPFLPDASEKIWHLLNLDEVKKWKFKE 531
Query: 548 EKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAG 592
+PAGH++ LFK++ D+++ +F + G
Sbjct: 532 --------------LPAGHRVRKAEILFKKVTDEQIIYFILNYMG 562
>sp|Q166L9|SYM_ROSDO Methionine--tRNA ligase OS=Roseobacter denitrificans (strain ATCC
33942 / OCh 114) GN=metG PE=3 SV=1
Length = 572
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/591 (37%), Positives = 336/591 (56%), Gaps = 43/591 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
LITSA+PY+N + HLGN++GS L AD++AR+ R RG+ +++C TDE+GT E A +
Sbjct: 5 LITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLFLCATDEHGTPAELAAAKAG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
E C + H I ++ K F +SFD+FGR+S+ Q Q KL + N + E +Q
Sbjct: 65 KPVDEYCAEMHAIQSEIAKGFRLSFDHFGRSSSAQNHRLTQHFAGKLDEANLIDEVIEKQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP-Q 203
Y RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL +P+ + + +
Sbjct: 125 VYSHADGRFLPDRYIEGTCP--NCAYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDLE 182
Query: 204 IRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDLKW 261
+R+T HL+L L+++L+ +I++ + W WL +GL+ R ITRDL W
Sbjct: 183 VRETKHLYLKQSVLKDQLDAWIDSKT---DWPVLTTSIAKKWLHDGDGLRDRGITRDLDW 239
Query: 262 GVPVP-----LERFKEKVFYVWFDAPIGYVSITSCYT-------NEWEQWW---KNPENV 306
G+PV + KVFYVWFDAPI Y++ S + ++WE+WW K ++V
Sbjct: 240 GIPVKKGTQDWPGMEGKVFYVWFDAPIEYIACASEWAEANNLEQSDWERWWRTDKGADDV 299
Query: 307 ELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGND 366
QFMGKDNVPFHT+ FP+TLLG+GE W ++ + YLNY+ G+FS S+G G+F +
Sbjct: 300 RYTQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGIFMDQ 359
Query: 367 AKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPG 426
A + +P + WR++LL++ PE SD+ FTW + Q+ N +L + LGNF++R+ F A
Sbjct: 360 ALEL-LPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNFVSRITKFCAAK-- 416
Query: 427 QGYGSIVP--DANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNA 484
+GS VP A G+ +L L E + +Y + Y+ AME K Q L+ +I + GN
Sbjct: 417 --FGSEVPAGGAYGSAELELLTKLDESLTRY-QDYMGAMEVRKSAQELR---AIWASGNE 470
Query: 485 YLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHIS 544
YLQ W ++K D + ++ R + L L L PF+P S ++ K L +
Sbjct: 471 YLQTVAPWSVFKTDPETAAMQTRLGLNLALLFGVLSSPFVPDASEKILKCLGHPSARWPD 530
Query: 545 LCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQA 595
C + + P+E+ P LF +L D++ + +KF+G+Q+
Sbjct: 531 TCTDFVTSMKPGDPFEV---------PEVLFAKLTDEDRATYSAKFSGTQS 572
>sp|B6YUN0|SYM_THEON Methionine--tRNA ligase OS=Thermococcus onnurineus (strain NA1)
GN=metG PE=3 SV=1
Length = 733
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/581 (37%), Positives = 322/581 (55%), Gaps = 47/581 (8%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++TSALPY N H G++ G+ L AD+F R+ RL+G I+I GTDE+GT +A+++
Sbjct: 5 MVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVIFISGTDEHGTPITFRALKEG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP+EI D YH K ++ ISFD FGRT P Q F K L+N+ LI+ +Q
Sbjct: 65 KSPREIVDYYHEHIKTTFERAKISFDYFGRTELPVHYRISQDFFLKALENDHLIKKVSKQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ K FL DR V GTCP+ C E+ RGDQCE CG L +L +P+C +C N
Sbjct: 125 AYCEHDKMFLPDRYVIGTCPY--CGAENQRGDQCEVCGHPLTPEELINPRCNICGNPITF 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
RD+ H ++ + KL+E++ + W N W++EGL+ R ITRDL WG+P
Sbjct: 183 RDSAHYYIKMQDFAEKLKEWVQSQE---HWKPNVKNTVLGWIEEGLEERAITRDLNWGIP 239
Query: 265 VPL--ERFKEKVFYVWFDAPIGYVSITSCYT------NEWEQWWKNPE-NVELYQFMGKD 315
VPL E K KV YVWF+APIGY+SIT + NEW+++W N + ++ F+GKD
Sbjct: 240 VPLDDEDVKGKVLYVWFEAPIGYISITVEHLKREGKENEWKKFWLNLDGGTKVIHFIGKD 299
Query: 316 NVPFHTVMFPSTLLGTGE--------NWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDA 367
N+PFH + +P+ L+ G+ W L I EYLN E KFS S+ ++ ++
Sbjct: 300 NIPFHAIFWPAFLMAYGKYKEEETEAEWLLPYDIPANEYLNLEGKKFSTSRNWAIWVHEF 359
Query: 368 KDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQ 427
D P + RYYL PE D+ F++AD + K N EL+NNLGNF++R L+F+ +
Sbjct: 360 LDA-FPADYLRYYLTAIMPETRDSDFSFADFKTKINEELVNNLGNFVHRALTFV----NR 414
Query: 428 GYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQ 487
+ +VP+ E L + E++ K +++ E + + K L+ M ++ GN Y
Sbjct: 415 YFDGVVPER--GELDDLDRQAFEEIEKALKETGELISTYRFKDALRRVMELAIFGNRYFD 472
Query: 488 ESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCD 547
+ WK KE++ + + S+ +V +L LLEPF+P S ++ LNL+ K
Sbjct: 473 YQKPWKTAKENRERTATTVNVSLQIVKVLGVLLEPFLPDASEKIWHLLNLEETKR----- 527
Query: 548 EKGDVDRARRPWEI--IPAGHKIGSPNPLFKELKDDEVEFF 586
WE IPAGH++ LF+++ D+++ FF
Sbjct: 528 -----------WEFIEIPAGHRVRRAEILFRKVTDEDIIFF 557
>sp|Q28MK0|SYM_JANSC Methionine--tRNA ligase OS=Jannaschia sp. (strain CCS1) GN=metG
PE=3 SV=1
Length = 570
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/586 (37%), Positives = 324/586 (55%), Gaps = 44/586 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
LITSA+PY+N + HLGN++GS L AD++AR+ R RG +++C TDE+GT E A +
Sbjct: 8 LITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGQEVLFLCATDEHGTPAELAAAKAG 67
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
E C H + ++ + F +SFD+FGR+S+PQ Q KL D + E +Q
Sbjct: 68 KPVAEYCADMHAVQAEIARGFRLSFDHFGRSSSPQNHALTQHFAGKLADAGLIAEVEEKQ 127
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP-Q 203
Y RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL +P+ + + +
Sbjct: 128 VYSHADGRFLPDRYIEGTCP--NCGYDKARGDQCENCTKQLDPTDLINPRSAISGSTDLE 185
Query: 204 IRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDLKW 261
+R+T HL+L LR +L ++I++ + W WL +GL+ R ITRDL W
Sbjct: 186 VRETKHLYLRQSQLRGQLSDWISSKT---DWPILTTSIAKKWLNDGDGLQDRGITRDLDW 242
Query: 262 GVPVP-----LERFKEKVFYVWFDAPIGYV-----SITSCYTNEWEQWW---KNPENVEL 308
GVPV + KVFYVWFDAPI Y+ ++ ++WE+WW K ++V
Sbjct: 243 GVPVKRGDADWPGMEGKVFYVWFDAPIEYIACAAEAVEEGSISDWERWWRVDKGADDVRY 302
Query: 309 YQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAK 368
QFMGKDNVPFHT+ FP+T+LG+GE W L+ I YLNY+ G+FS S+G GVF + A
Sbjct: 303 VQFMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 362
Query: 369 DTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQG 428
+ +P + WR++LL++ PE SD FTW Q N +L + LGNF++R+ F
Sbjct: 363 EI-LPSDYWRWWLLSHAPETSDAEFTWEAFQQDVNKDLADVLGNFVSRITKFCRSK---- 417
Query: 429 YGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQE 488
+G +VP+ G Q T +A+ + K + Y M+ + +++ +I GN YLQ
Sbjct: 418 FGEVVPE-GGDYGPQETALIAD-LDKRLAAYQTHMDAIDIRKAAAELRAIWVAGNEYLQS 475
Query: 489 SQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQL--NLQPEKHISLC 546
+ W +K D + + R ++ L+ A L PF+P + + + + NL K L
Sbjct: 476 AAPWTAFKTDPDRAAAITRFALNLIPFYAGLSAPFIPDAAQAMAEGMHTNLTWPKDARLT 535
Query: 547 DEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAG 592
+PAGH P+ LF ++ D++ E + ++F+G
Sbjct: 536 --------------TLPAGHAFTVPDVLFAKIADEQREDWAARFSG 567
>sp|A8ABN0|SYM_IGNH4 Methionine--tRNA ligase OS=Ignicoccus hospitalis (strain KIN4/I /
DSM 18386 / JCM 14125) GN=metG PE=3 SV=1
Length = 561
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/566 (39%), Positives = 324/566 (57%), Gaps = 34/566 (6%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++ SA PYVN VPHLGN+IGSVLSADVFARF RL G + +++ G+DE+GT E +A +
Sbjct: 5 IVGSAWPYVNTVPHLGNLIGSVLSADVFARFLRLMGEDVVFVSGSDEHGTPIEVEARKRG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
PKE+ DK H K +++ + ISFDN+ RT P E + F K+ +N ++ M
Sbjct: 65 VEPKELTDKVHEYVKKLFEKYLISFDNYTRTHNPVHMEFVRETFMKIYENGYIFTQEMVM 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
PYC K FL DR GTCP+ C ARGDQCE CGKLL+ DL +P+C C + P
Sbjct: 125 PYCPKDKMFLPDRFTVGTCPY--CGAPDARGDQCERCGKLLDPPDLVNPRCAFCGSRPVW 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
R T H F DLP L E++ + N + T W+KEGL R +TRD KWG+P
Sbjct: 183 RKTLHWFFDLPKAAEGLVEWLERSEL----PNNVKKFTLNWVKEGLTPRSVTRDNKWGIP 238
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCY-----TNEWEQWWKNPENVELYQFMGKDNVPF 319
P + K YVWF+A +GY+S TN +E++WK+ + +Y F+GKDN+PF
Sbjct: 239 APFPGAEGKTIYVWFEAVLGYLSAVKELDVKNGTNLFEEFWKDINSRPVY-FIGKDNIPF 297
Query: 320 HTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRY 379
H+++ P+ L TGE + L IS TEYL YE KFSK + +GV+ ++A + + WR+
Sbjct: 298 HSIILPALLKATGEEYPLPYNISATEYLMYEGQKFSKRRRVGVWIDEALEVVPNPDYWRF 357
Query: 380 YLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGA 439
L+ RPE DT FTW + N+EL +++GNF +RVL+F+ + G GS+ G
Sbjct: 358 ALIRMRPEERDTNFTWREFYRIVNSELNDDIGNFAHRVLTFVERRFG---GSV----RGR 410
Query: 440 ESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKE-D 498
++ K++AE E+Y++AM KVKLK+ + ++ GN YL E + W+L KE
Sbjct: 411 VDEEVKKSIAE----LHEKYVKAMYKVKLKEASGLVLEMARLGNKYLNEKEPWRLLKEGK 466
Query: 499 QPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRP 558
+ VM T + ++ +A L PF PS + E+ K + H E+G + +
Sbjct: 467 EEEARDVMYTCLFILREVALHLAPFAPSAAEELWKMIGEPGSVH-----ERGKLLTSGSE 521
Query: 559 WEIIPAGHKIGSPNPLFKELKDDEVE 584
PAG ++ P PLF++L D +E
Sbjct: 522 ----PAG-EVKEPKPLFQKLPKDFLE 542
>sp|Q5UR82|SYM_MIMIV Methionine--tRNA ligase OS=Acanthamoeba polyphaga mimivirus GN=MARS
PE=1 SV=1
Length = 550
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/528 (39%), Positives = 317/528 (60%), Gaps = 35/528 (6%)
Query: 22 RNILITSALPYVNNV-PHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKA 80
+ +TSALPY NN PHLGN++G++LS DV+ARF R +G+ IY+CGTDEYGT T +A
Sbjct: 2 QKFFVTSALPYPNNSSPHLGNLVGALLSGDVYARFKRNQGHEVIYLCGTDEYGTTTMIRA 61
Query: 81 MEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIEN 140
++ + +E+CDKY +HK VY WF+I FD FGRTST +QTE IF L +N ++ E
Sbjct: 62 RKEGVTCRELCDKYFELHKKVYDWFNIEFDVFGRTSTTKQTEITWEIFNGLYNNGYIEEK 121
Query: 141 TMQQPYCDTCKRFLADRLVEGTCPFEGC--NYESARGDQCENCGKLLNATDLKDPKCKVC 198
T Q +C+ C +LAD ++G C +GC N + GDQCE C K+++ L +P C +C
Sbjct: 122 TTVQAFCEKCDMYLADTYLKGYCYHDGCRENRVISNGDQCEICQKMIDVNKLINPFCSIC 181
Query: 199 RNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRD 258
P + T+HL+L L L +++Y++ + + + + AWL+ GL RCITRD
Sbjct: 182 LTPPIQKSTDHLYLSLDKLTPLVQQYLDRV----EFDSRIMAISKAWLEIGLNPRCITRD 237
Query: 259 LKWGVPVP------LERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFM 312
L+WG P+P LE++ +KVFYVWFDAPIGY SI + ++W +W + V
Sbjct: 238 LEWGTPIPINLDPKLEKYADKVFYVWFDAPIGYYSILANERDDWREWLNS--GVTWVSTQ 295
Query: 313 GKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTN- 371
KDNVPFH+++FP++++G+ L+ I T+YL YE KFSKS+G+G+FG+ + +
Sbjct: 296 AKDNVPFHSIVFPASVIGSNIELPLIDRICGTDYLLYEGQKFSKSQGVGLFGDKVAEISP 355
Query: 372 ---IPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQG 428
I + WR+YL+ RPE D+ F + +L+NN+GNFINRV S + K P +
Sbjct: 356 KLGINEDYWRFYLMKIRPETQDSSFNLEEFVRIVKTDLVNNIGNFINRVFSLLEKTPYR- 414
Query: 429 YGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQE 488
D N +Q++ E ++++Y +M++ K + GLK + +SS GN ++Q
Sbjct: 415 ------DLN----YQISPEYIE----FIKKYEVSMDEFKFRDGLKICLEMSSRGNKFVQS 460
Query: 489 SQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLN 536
++ W + K D +M +VG+ +L LL+P +P + ++ L+
Sbjct: 461 TKPWTMIK-DGLDTQEIMTEAVGICWILLNLLKPIIPKSACDMLSNLD 507
>sp|A0M5Z9|SYM_GRAFK Methionine--tRNA ligase OS=Gramella forsetii (strain KT0803)
GN=metG PE=3 SV=1
Length = 691
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/610 (36%), Positives = 337/610 (55%), Gaps = 33/610 (5%)
Query: 26 ITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDNC 85
IT+ALPY N H+G++ G + AD+++RF R++GY+ ++CG+DE+G KA ++
Sbjct: 10 ITAALPYTNGPIHIGHLAGVYVPADIYSRFLRMQGYDVAFVCGSDEHGVPITIKAKKEGV 69
Query: 86 SPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQP 145
+P+++ DKY+ I K ++ F I+FDN+ RTS + A FKK+ ++ IE + +Q
Sbjct: 70 TPQDVVDKYNGIIKKSFEDFGITFDNYSRTSGKTHHDTASAFFKKMYEDGKFIEESTEQL 129
Query: 146 YCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQIR 205
Y + +FLADR V GTCP C E A GDQCE+CG LNATDL +PK + P ++
Sbjct: 130 YDEEAGQFLADRFVTGTCP--KCGNEEAYGDQCESCGTSLNATDLINPKSAITGAVPTLK 187
Query: 206 DTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVPV 265
+T H FL L + L+E+I W N +W+ +GL+ R +TRDL WG+PV
Sbjct: 188 ETRHWFLPLDQYEDFLKEWILK-GHKSDWKSNVYGQVKSWIDDGLRARAVTRDLDWGIPV 246
Query: 266 PLERFKEKVFYVWFDAPIGYVSITSCYT----NEWEQWWKNPENVELYQFMGKDNVPFHT 321
P+E KV YVWFDAPIGY+S T + +WE +WK+ EN +L F+GKDN+ FH
Sbjct: 247 PVEGGDGKVLYVWFDAPIGYISSTKEWAEREGKDWEPYWKD-ENTKLVHFIGKDNIVFHC 305
Query: 322 VMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGND-AKDTNIPVEVWRYY 380
++FP L G ++ L + + E+LN E K S SK V+ ++ ++ +V RY
Sbjct: 306 IIFPVMLKAHG-DYILPENVPANEFLNLEGKKLSTSKNWAVWLHEYLEEFPDQQDVLRYV 364
Query: 381 LLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAE 440
L N PE D FTW D QA++NNEL+ GNFINRV+ K Y IVP+ GA
Sbjct: 365 LTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKY----YNGIVPEP-GAY 419
Query: 441 SHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQP 500
S KT+AE + Y ++E+ + ++ M+++ GN YL + + WKL K D+
Sbjct: 420 SEIDEKTIAE-LKAYPSVIASSIERYRFREAQGELMNLARLGNKYLADEEPWKLIKTDEE 478
Query: 501 SCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRPWE 560
+M ++ + L+ + EPF+P S ++ K LN E D D D
Sbjct: 479 RVKTIMYVALQIASALSIISEPFLPFTSAKLKKMLNHVDES----SDNTPDWDIIGTKEA 534
Query: 561 IIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLKKTKISGE 620
+I GH+IG LF +++D+++E Q +++ EA KTA ++ K +
Sbjct: 535 LILGGHQIGKAELLFSKIEDEQME--------KQLEKL-----EATKTANAMEDQKAEPQ 581
Query: 621 NGLCSLQSET 630
+ + + T
Sbjct: 582 KEIATFEDFT 591
>sp|A3MVB7|SYM_PYRCJ Methionine--tRNA ligase OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=metG PE=3 SV=1
Length = 570
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/566 (39%), Positives = 325/566 (57%), Gaps = 31/566 (5%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
+I SA PYV VPHLGN+IGSVLSADV+AR+ RLRG++ +++ G+D +GT E +A++
Sbjct: 5 VIGSAWPYVQTVPHLGNMIGSVLSADVYARYLRLRGHDVVFVSGSDMHGTPIEVEAIQLG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
P E K H + +++K ++ISFD + T + Q FK++ +N ++ +
Sbjct: 65 VDPAEYAFKMHGVVAELFKRWNISFDLYTHTHSETHVAFVQEFFKRIYENGYIFTKDEEM 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
PYC K FL DR + G CP+ C YE ARGDQCENCG+LL+ L +P+C VC + P+
Sbjct: 125 PYCPRDKIFLPDRFIIGKCPY--CGYERARGDQCENCGRLLDPKQLVEPRCAVCGSKPEW 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
R T H +LDL L +K+ +Y+ QNA + + A LKEGLK R +TRD KWG+P
Sbjct: 183 RLTRHWYLDLRRLEDKIRKYVEENP---HLPQNAKEMSLAMLKEGLKPRAVTRDNKWGIP 239
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCY------TNEWEQWWKNPENVELYQFMGKDNVP 318
P + K YVWF+A +GY+S + +EWE++W++P+ ++ F+GKDN+P
Sbjct: 240 APFPGAEGKTIYVWFEAVLGYISAVVEHFKRLGKESEWEKYWRDPDTKIIF-FVGKDNIP 298
Query: 319 FHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWR 378
FH ++ P+ LL G +TL T + TEYL YE KFSKS+ G++ ++A +P + WR
Sbjct: 299 FHVIILPALLLANGGGYTLPTTTASTEYLLYEGDKFSKSRRWGIWIDEALHL-LPADYWR 357
Query: 379 YYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANG 438
+ L+ RPE DT FTWA N L +++GN++NRVLSFI G G + P
Sbjct: 358 FILVYIRPENRDTSFTWAQALEIVNKVLNDDVGNYVNRVLSFIKSRMG---GVVPPPGTP 414
Query: 439 AESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKED 498
E + A ++ K E++ EA+E LK L T + I+ EGN YL W L K
Sbjct: 415 QEEDKSFLQAALQLFKKAERHYEAVE---LKDALHTVVEIAREGNRYLNARAPWDLLKTR 471
Query: 499 QPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRP 558
+ VM + + +LA L P +P SVE ++ +P SL D A R
Sbjct: 472 PEEANAVMYHAYWSLKMLAAGLAPVIPE-SVEKMWEMMGRPA---SLT-----WDEALR- 521
Query: 559 WEIIPAGHKIGSPNPLFKELKDDEVE 584
E P G K+G PLF+++ +DEV+
Sbjct: 522 -EPAP-GVKLGEVKPLFRKVGEDEVK 545
>sp|Q5JDZ7|SYM_PYRKO Methionine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=metG PE=3 SV=1
Length = 741
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/585 (35%), Positives = 322/585 (55%), Gaps = 43/585 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++TSALPY N H G++ G+ L AD+F R+ RL+G ++ICGTDE+GT +A+++
Sbjct: 5 MVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVLFICGTDEHGTPITFRALKEG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP+EI D++H K ++ ISFD FGRT P Q F K L+N L++ +Q
Sbjct: 65 RSPREIVDEFHEHIKTTFERAKISFDFFGRTELPVHYRLSQEFFLKALENGHLVKKVTKQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ K FL DR V GTCP+ C E+ RGDQCE CG L L +P+C +C N
Sbjct: 125 AYCEHDKMFLPDRYVIGTCPY--CGAENQRGDQCEVCGHPLTPEILINPRCNICGNPITF 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+D+ H ++ + +L++++ + W N W+ EGL+ R ITRDL WG+P
Sbjct: 183 KDSAHYYIRMQDFEERLKKWVESQE---HWKPNVRNTVLGWINEGLEERAITRDLDWGIP 239
Query: 265 VPL--ERFKEKVFYVWFDAPIGYVSITSCYT------NEWEQWWKNPEN-VELYQFMGKD 315
VPL E K KV YVWF+APIGY+SIT + NEW+++W N + ++ F+GKD
Sbjct: 240 VPLDDEDVKGKVLYVWFEAPIGYISITIEHLKREGKENEWKKFWLNLDGETKVIHFIGKD 299
Query: 316 NVPFHTVMFPSTLLGTGE--------NWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDA 367
N+PFH + +P+ L+ G+ W L I EYLN E KFS S+ ++ ++
Sbjct: 300 NIPFHAIFWPAFLMAYGKYRDEEVEAEWNLPYDIPANEYLNLEGKKFSTSRNWAIWVHEF 359
Query: 368 KDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQ 427
D P + RYYL PE D+ F++ D + K N EL+NNLGNF++R ++F+ +
Sbjct: 360 LDV-WPADYLRYYLTAIMPETRDSDFSFEDFKKKINEELVNNLGNFVHRAMTFV----NR 414
Query: 428 GYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQ 487
+ +VP+ E + L + E++ K ++ E + + K LK M ++ GN Y
Sbjct: 415 YFDGVVPER--GELNDLDRQALEEIEKAFKETGELISNYRFKDALKRVMELAIFGNRYFD 472
Query: 488 ESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCD 547
+ WK KE++ + + S+ +V L LLEPF+P S ++ LNL+ K S
Sbjct: 473 YQKPWKTAKENRERTATTVNVSLQIVKALGILLEPFLPDASEKIWHLLNLEEVKKWS--- 529
Query: 548 EKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAG 592
+E +PAGH++ P+F+++ D E+ +F + G
Sbjct: 530 -----------FEELPAGHRVRKAFPMFRKVTDGEIIYFIVNYIG 563
>sp|A1RXT9|SYM_THEPD Methionine--tRNA ligase OS=Thermofilum pendens (strain Hrk 5)
GN=metG PE=3 SV=1
Length = 565
Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/588 (36%), Positives = 333/588 (56%), Gaps = 39/588 (6%)
Query: 20 GKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETK 79
+R L+ +A PY VPHLGN+IGSVLSADV ARF RL G +++ G+D +GT E +
Sbjct: 5 ARRKWLVLAAWPYAYGVPHLGNLIGSVLSADVAARFLRLAGDEVVFVSGSDMHGTPIEVE 64
Query: 80 AMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIE 139
A++ SPK++ ++ H K++++ ++ISFDN+ +T +P + Q ++++ +N ++
Sbjct: 65 ALKRGESPKDLAERNHEKIKELFERWEISFDNYSKTESPTHIKFVQDFYRRVYENGYVFS 124
Query: 140 NTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCR 199
+T+Q YC K FL DR + GTCP+ C Y+ A GDQCENCG+LL T L +P+C +C
Sbjct: 125 DTVQLYYCPKDKIFLPDRYIVGTCPY--CGYDRAYGDQCENCGRLLEPTLLLNPRCAICG 182
Query: 200 NAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDL 259
+ P++R T H F DLP L + L+ YI + NA + L++GLK R +TRD
Sbjct: 183 STPELRTTTHWFFDLPKLTDALKRYIEENE---NLPPNARNMSLQILRDGLKPRALTRDN 239
Query: 260 KWGVPVPLERFKEKVFYVWFDAPIGYVSITSCY------TNEWEQWWKNPENVELYQFMG 313
KWG+P P ++K YVW +A +GY+S T Y +W+++W +PE +Y F+G
Sbjct: 240 KWGIPAPFPGAEDKTIYVWMEAVLGYISATIEYFASKGEPEKWKEFWLDPETRSVY-FIG 298
Query: 314 KDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIP 373
KDN+PFHT++ P+ L+ +GE + L T++ TEYL + KFSKS+ IGV+ ++A + P
Sbjct: 299 KDNIPFHTLILPALLIASGEKYVLPWTVASTEYLLFRGLKFSKSRRIGVWIDEALEV-FP 357
Query: 374 VEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIV 433
+ WR+ L++ RPE D FTW + NN+L +N+GNF++RVL + + +G I
Sbjct: 358 ADYWRFVLVSLRPEQKDMSFTWEEFLRIVNNDLNDNIGNFVHRVLVLVQR----KFGGIA 413
Query: 434 PDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWK 493
P L E++ + E M + K+ L + +SS GN+YL + W+
Sbjct: 414 PAPLDFADEDL--KFREEILARSREVAEFMYAFRFKEALTHILWLSSSGNSYLNFRKPWE 471
Query: 494 LYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVD 553
L D S ++ V LA +L P +P S E+ K L K D+
Sbjct: 472 L---DSESARTPAFLALHAVKALAIMLYPIIPRSSQEMWKLLGY-----------KDDIA 517
Query: 554 RARRPW----EIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADR 597
R W E +P G ++ SP PLF+++ ++E++ K +A R
Sbjct: 518 NHR--WHEINEAVPPGQELPSPRPLFRKISEEELKAAVEKIEELRASR 563
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 256,875,388
Number of Sequences: 539616
Number of extensions: 11380567
Number of successful extensions: 35805
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 819
Number of HSP's that attempted gapping in prelim test: 31072
Number of HSP's gapped (non-prelim): 2660
length of query: 648
length of database: 191,569,459
effective HSP length: 124
effective length of query: 524
effective length of database: 124,657,075
effective search space: 65320307300
effective search space used: 65320307300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)