Query 006371
Match_columns 648
No_of_seqs 137 out of 752
Neff 5.6
Searched_HMMs 46136
Date Thu Mar 28 22:18:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006371.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006371hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00150 potassium ion transpo 100.0 2E-210 4E-215 1759.9 58.0 642 5-648 78-779 (779)
2 PLN00148 potassium transporter 100.0 1E-210 3E-215 1761.9 56.5 642 5-648 58-785 (785)
3 PLN00151 potassium transporter 100.0 2E-210 4E-215 1757.7 57.5 642 6-648 135-852 (852)
4 TIGR00794 kup potassium uptake 100.0 1E-208 2E-213 1738.9 58.6 642 5-648 29-688 (688)
5 PLN00149 potassium transporter 100.0 2E-208 4E-213 1746.0 58.2 642 5-648 54-779 (779)
6 PRK10745 trkD potassium transp 100.0 4E-203 9E-208 1671.1 53.9 579 5-648 43-622 (622)
7 COG3158 Kup K+ transporter [In 100.0 3E-197 6E-202 1585.2 50.2 578 5-648 49-627 (627)
8 PF02705 K_trans: K+ potassium 100.0 1E-186 2E-191 1530.0 44.9 506 4-542 29-534 (534)
9 TIGR00911 2A0308 L-type amino 94.7 0.25 5.5E-06 55.9 11.7 103 138-244 165-273 (501)
10 PF13520 AA_permease_2: Amino 91.0 2.6 5.5E-05 46.2 12.4 258 110-384 87-374 (426)
11 TIGR00909 2A0306 amino acid tr 88.3 7.6 0.00016 42.8 13.6 211 140-368 135-360 (429)
12 COG0531 PotE Amino acid transp 87.7 22 0.00047 39.2 16.7 179 137-319 133-324 (466)
13 PRK15049 L-asparagine permease 85.9 15 0.00033 41.8 14.6 176 140-320 146-342 (499)
14 TIGR03813 put_Glu_GABA_T putat 85.9 25 0.00054 39.6 16.1 118 141-262 126-250 (474)
15 PRK10435 cadB lysine/cadaverin 83.3 38 0.00082 37.7 16.0 23 141-163 124-146 (435)
16 PRK10655 potE putrescine trans 82.9 46 0.001 36.9 16.4 43 140-182 125-170 (438)
17 TIGR00907 2A0304 amino acid pe 82.5 14 0.0003 41.7 12.2 25 139-163 144-168 (482)
18 PRK10746 putative transport pr 80.3 77 0.0017 35.8 17.2 27 419-445 427-453 (461)
19 PRK10249 phenylalanine transpo 76.8 55 0.0012 36.8 14.7 114 141-257 138-259 (458)
20 PRK10238 aromatic amino acid t 75.6 63 0.0014 36.3 14.7 114 141-258 129-251 (456)
21 PRK11021 putative transporter; 73.0 1.3E+02 0.0028 33.1 16.1 172 138-320 115-299 (410)
22 PRK10580 proY putative proline 70.4 86 0.0019 35.1 14.2 99 142-245 127-238 (457)
23 PRK11387 S-methylmethionine tr 70.3 1E+02 0.0022 34.7 14.8 21 142-162 133-153 (471)
24 TIGR00913 2A0310 amino acid pe 70.2 83 0.0018 35.3 14.1 105 214-319 203-327 (478)
25 TIGR00908 2A0305 ethanolamine 69.7 72 0.0016 35.4 13.3 25 140-164 123-147 (442)
26 TIGR00906 2A0303 cationic amin 69.6 1.7E+02 0.0037 34.0 16.8 44 139-182 162-208 (557)
27 TIGR00905 2A0302 transporter, 69.2 64 0.0014 36.4 12.9 168 140-319 131-320 (473)
28 TIGR03810 arg_ornith_anti argi 68.9 1.9E+02 0.0041 32.5 16.6 44 277-320 274-317 (468)
29 PRK11357 frlA putative fructos 68.8 38 0.00081 37.7 10.8 107 140-253 129-242 (445)
30 TIGR01773 GABAperm gamma-amino 67.8 1.8E+02 0.0039 32.5 15.9 176 140-319 128-323 (452)
31 PF14362 DUF4407: Domain of un 65.1 54 0.0012 34.9 10.7 89 356-445 11-113 (301)
32 PRK11049 D-alanine/D-serine/gl 61.8 1.5E+02 0.0032 33.5 13.9 177 141-319 137-332 (469)
33 TIGR00930 2a30 K-Cl cotranspor 59.3 1.8E+02 0.0038 36.5 15.0 25 138-162 203-227 (953)
34 TIGR00910 2A0307_GadC glutamat 56.4 2.9E+02 0.0064 31.6 15.3 48 211-258 197-246 (507)
35 KOG3788 Predicted divalent cat 53.7 1.5E+02 0.0032 33.5 11.6 126 293-431 112-262 (441)
36 PF00324 AA_permease: Amino ac 51.5 17 0.00038 40.8 4.4 106 140-245 119-239 (478)
37 COG4059 MtrE Tetrahydromethano 49.1 15 0.00033 37.9 3.0 30 416-445 259-288 (304)
38 KOG3643 GABA receptor [Signal 38.7 23 0.0005 40.0 2.7 105 298-406 209-324 (459)
39 PF06570 DUF1129: Protein of u 33.5 1.5E+02 0.0032 29.9 7.4 21 418-438 179-199 (206)
40 PRK10644 arginine:agmatin anti 32.5 7.3E+02 0.016 27.6 16.4 23 141-163 128-150 (445)
41 PF05313 Pox_P21: Poxvirus P21 29.3 1.1E+02 0.0025 30.7 5.5 59 244-312 91-149 (189)
42 PF11827 DUF3347: Protein of u 28.0 23 0.0005 35.0 0.5 21 255-275 143-163 (174)
43 PRK10519 hypothetical protein; 24.6 26 0.00057 34.1 0.2 55 120-180 13-68 (151)
44 PF05545 FixQ: Cbb3-type cytoc 24.4 70 0.0015 24.9 2.5 30 427-456 19-48 (49)
45 PRK10197 gamma-aminobutyrate t 22.3 1.1E+03 0.024 26.3 14.0 23 140-162 108-130 (446)
No 1
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=1.6e-210 Score=1759.88 Aligned_cols=642 Identities=42% Similarity=0.798 Sum_probs=610.7
Q ss_pred CCCcCcchhhhHHHHHHHHHHHhhheeeEEEEeCCCCCChHHHHHHHhhcccccCccCccc--cCCccccc-ccccchhh
Q 006371 5 SPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKN--LDSNSIFH-EGAENKSR 81 (648)
Q Consensus 5 ~~~~~~i~G~lSlIfWtL~liv~iKYv~ivl~adn~GEGGi~aL~sL~~r~~~~~~~~~~~--~~~~~~~~-~~~~~~~~ 81 (648)
.++++||+|+||||||||||++++|||+|||||||||||||||||||+||++|++..|+++ |++++++. ++..+.++
T Consensus 78 ~~~~~~ilGvLSLIfWtLtLiv~iKYV~ivLrAdn~GEGGtfALysLl~r~aki~l~~~~~~~~~~~s~~~~~~~~r~~~ 157 (779)
T PLN00150 78 VKNNDDIIGALSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCRYCNISLLPNQHPTDVELTTYVVDNMNRKTR 157 (779)
T ss_pred CCCHHHhHhHHHHHHHHHHHHHHHhheeEEEEccCCCCcchhhHHHHHhhhcccccCCccccchhhhhhcccccchhhhH
Confidence 4789999999999999999999999999999999999999999999999999999999876 55667764 34444567
Q ss_pred hhhhhhhchhHHHHHHHHHHhhhhhhhcCccccchhhHhhhhcccccCCCCCCCceeehhHHHHHHHHHHHhhccccccc
Q 006371 82 LGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVS 161 (648)
Q Consensus 82 ~~~~l~~~~~~~~~l~~~~l~G~~l~~gDgviTPAiSVlSAveGl~~~~p~~~~~~vv~is~~Il~~LF~~Q~~GT~~ig 161 (648)
.|+++|+++..|++++++|++|+||++|||+||||||||||||||++..|++++++|+|+||+||++||++||+||+|||
T Consensus 158 ~k~~lE~~~~~~~~l~~l~l~G~~m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg 237 (779)
T PLN00150 158 IQRKLENSRVWQNVLLLIVLLGTCMVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVS 237 (779)
T ss_pred HHHhhhcchHHHHHHHHHHHHHHHHHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhh
Confidence 99999999988899999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhcCchhhhhhcceeeeecchhhhhhccCCCCccchhh
Q 006371 162 FLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQM 241 (648)
Q Consensus 162 ~~FgPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~~~LG~v~L~iTG~EALyADmGHfg~~~I~~ 241 (648)
++|||||++||++||++|+|||++|||+||+|+||+||++||.+||..||.+||+|+||+||+||||||||||||+|||+
T Consensus 238 ~~FgPIm~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iri 317 (779)
T PLN00150 238 FLFAPIFLCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQI 317 (779)
T ss_pred hhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceee
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhcchhhHhhcCCCcccccccccccccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCccce
Q 006371 242 AFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVK 321 (648)
Q Consensus 242 sw~~~V~P~L~lnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr~~ 321 (648)
||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+|
T Consensus 318 aw~~~V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvk 397 (779)
T PLN00150 318 AFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVK 397 (779)
T ss_pred eehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCcccchhhHHHHHHHhheeeEEeCCchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHH
Q 006371 322 VVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFF 401 (648)
Q Consensus 322 i~hTS~~~~GQiYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~ 401 (648)
|+|||++++||||||+|||+||++|++++++||||++||+|||+||++||++||+|+++|++.+||||++++++|+++|+
T Consensus 398 I~hTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~ 477 (779)
T PLN00150 398 IVHTSNKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFA 477 (779)
T ss_pred EEecCcccCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccCCcchHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChhHHHhhcCCCCCcccCceEEEEeCCCC
Q 006371 402 TMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQ 481 (648)
Q Consensus 402 ~id~~f~~an~~K~~~Ggw~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpg~avf~t~~~~ 481 (648)
++|+.||+||+.||+||||+|+++|++++++|++||+|++++++++.+++++++++.+...+.++.||||+|+|+|++ +
T Consensus 478 ~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~-~ 556 (779)
T PLN00150 478 IIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDL-A 556 (779)
T ss_pred HHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCC-C
Confidence 999999999999999999999999999999999999999999999999999999996666555578999999999999 9
Q ss_pred CCccchhhhhhccCcccceEEEEEEEEeeecccCCCCccEEEEEecCCC--EEEEEEEEeeccccCCcccchHHHHHHHH
Q 006371 482 DGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKG--VYGCVIQYGYADTLNLEGNDFVNQVTDCL 559 (648)
Q Consensus 482 ~~vP~~l~h~l~~~~~lhe~vvfltI~~~~vP~V~~~~R~~V~~l~~~g--~yrv~lryGF~e~p~~~~~~f~~~iL~~L 559 (648)
+++|++|.||++|||++||++||+||+++|+|+|+++||++++++++++ +|||++||||||+. .++++|++++++++
T Consensus 557 ~gvP~~f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~-~d~~dFE~~LvesL 635 (779)
T PLN00150 557 HGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLE-KKDDNFEQLLIASL 635 (779)
T ss_pred CCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCc-ccchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999555 99999999999986 47899999999999
Q ss_pred HHhhhhhccCC-------------CC-----C------------------------------------CcchHHHHHHHH
Q 006371 560 REHIEKYLDCL-------------PS-----N------------------------------------PVDIQEEISALE 585 (648)
Q Consensus 560 ~~~i~~d~~~~-------------~~-----~------------------------------------~~~~~~e~~~L~ 585 (648)
+++++.|..+. ++ + .+..++|+++++
T Consensus 636 ~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~ 715 (779)
T PLN00150 636 ERFIEIESFREQSDLESMAASWTPEELMGEGNSVGSGLFTQYDQSDINFATSQEWKRPSSQEDSVSGHSSDTQDEVAFLN 715 (779)
T ss_pred HHHHHhhhhcccccccccccccccccccccCCcccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 99987654210 00 0 001247888999
Q ss_pred HhccCceEEEEEeEEEEecCCCchHHHHHHH-HHHHHHhhccCCCCcccCCCCCEEEEeEEEEC
Q 006371 586 EAKLSDVIHVRGKTRFYIGKNCKRFDRIMLA-FYEVLHSNCRSALPALSVPLSQRIEVGMLYEA 648 (648)
Q Consensus 586 ~a~~~~~~yflgre~L~~~~~s~~~kr~~i~-lF~~LkrNa~s~~~~f~LP~srVVEVG~~~ei 648 (648)
+|+++|++|++||++++++++++|+||+++| +|.|||||||++...+++|++|++||||.|++
T Consensus 716 ~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 716 KCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred HHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999998 99999999999999999999999999999986
No 2
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=1.3e-210 Score=1761.90 Aligned_cols=642 Identities=42% Similarity=0.770 Sum_probs=610.7
Q ss_pred CCCcCcchhhhHHHHHHHHHHHhhheeeEEEEeCCCCCChHHHHHHHhhcccccCccCccc--cCCccccc----ccccc
Q 006371 5 SPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKN--LDSNSIFH----EGAEN 78 (648)
Q Consensus 5 ~~~~~~i~G~lSlIfWtL~liv~iKYv~ivl~adn~GEGGi~aL~sL~~r~~~~~~~~~~~--~~~~~~~~----~~~~~ 78 (648)
+|+++||+|+||||||||||++++|||+|||||||||||||||||||+||++|.+..|+++ |+++++|+ +.++.
T Consensus 58 ~~~~~~ilGvLSLIfWtLtLiv~iKYV~ivlrAdn~GEGG~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~~~ 137 (785)
T PLN00148 58 HQNEETIFGAFSLIFWTFTLIPLLKYVTILLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQTVG 137 (785)
T ss_pred CCCHHHHHhHHHHHHHHHHHHHHHhheEEEEEecCCCCchHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccchh
Confidence 4899999999999999999999999999999999999999999999999999988888876 77788873 23455
Q ss_pred hhhhhhhhhhchhHHHHHHHHHHhhhhhhhcCccccchhhHhhhhcccccCCCCCCCceeehhHHHHHHHHHHHhhcccc
Q 006371 79 KSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTS 158 (648)
Q Consensus 79 ~~~~~~~l~~~~~~~~~l~~~~l~G~~l~~gDgviTPAiSVlSAveGl~~~~p~~~~~~vv~is~~Il~~LF~~Q~~GT~ 158 (648)
+++.|+++|+|++.|.+++++|++|+||++|||+||||||||||||||++..|++++++|+|+||+||++||++||+||+
T Consensus 138 ~~~~k~~lE~~~~~~~~ll~l~l~G~am~~gDgvlTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~ 217 (785)
T PLN00148 138 SSPLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTH 217 (785)
T ss_pred hhHHHHHhhhchHHHHHHHHHHHHHHHHHHhccccchhHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccH
Confidence 57799999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhcCchhhhhhcceeeeecchhhhhhccCCCCccc
Q 006371 159 RVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSS 238 (648)
Q Consensus 159 ~ig~~FgPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~~~LG~v~L~iTG~EALyADmGHfg~~~ 238 (648)
|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||+.||.+||+|+||+||+||||||||||||+|
T Consensus 218 kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~ 297 (785)
T PLN00148 218 RVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAAS 297 (785)
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcCHHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccc
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhhcchhhHhhcCCCcccccccccccccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCc
Q 006371 239 IQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFP 318 (648)
Q Consensus 239 I~~sw~~~V~P~L~lnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~P 318 (648)
||+||+++|||||+|||+||||||++||++.+||||.++|+|++||++++||+||||||||+|||+||+++||++|||||
T Consensus 298 Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fP 377 (785)
T PLN00148 298 IRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFP 377 (785)
T ss_pred eEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEecCCCCCCcccchhhHHHHHHHhheeeEEeCCchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHH
Q 006371 319 RVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFL 398 (648)
Q Consensus 319 r~~i~hTS~~~~GQiYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~ 398 (648)
|+||+|||++++||||||+|||+||++|++++++||||++||+|||+||++||++||+|+++|++.+||||++++++|++
T Consensus 378 rvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~ 457 (785)
T PLN00148 378 RVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLL 457 (785)
T ss_pred CceEEecCCccCCceeeHHHHHHHHHHHHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCcchHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChhHHHhhcCCCCCcccCceEEEEeC
Q 006371 399 VFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTN 478 (648)
Q Consensus 399 ~f~~id~~f~~an~~K~~~Ggw~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpg~avf~t~ 478 (648)
+|+++|++||+||+.||+||||+|+++|++++++|++||+|++++++++.+++++++++.+...+.++.||||+|+|+|+
T Consensus 458 ~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~ 537 (785)
T PLN00148 458 FFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSE 537 (785)
T ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999666655557899999999999
Q ss_pred CCCCCccchhhhhhccCcccceEEEEEEEEeeecccCCCCccEEEEEecCCC--EEEEEEEEeeccccCCcccchHHHHH
Q 006371 479 IHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKG--VYGCVIQYGYADTLNLEGNDFVNQVT 556 (648)
Q Consensus 479 ~~~~~vP~~l~h~l~~~~~lhe~vvfltI~~~~vP~V~~~~R~~V~~l~~~g--~yrv~lryGF~e~p~~~~~~f~~~iL 556 (648)
+ ++++|++|.||++|||++||++||+||+++|+|+|+++||++++++++++ +|||++||||||+. .++++|+++++
T Consensus 538 ~-~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~~-~~~~dFe~~Lv 615 (785)
T PLN00148 538 L-ATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQ-RDDGDFENMLV 615 (785)
T ss_pred C-CCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCccc-ccchHHHHHHH
Confidence 9 99999999999999999999999999999999999999999999999443 99999999999986 48899999999
Q ss_pred HHHHHhhhhhccCC-------CC-----------------------C---------------------------------
Q 006371 557 DCLREHIEKYLDCL-------PS-----------------------N--------------------------------- 573 (648)
Q Consensus 557 ~~L~~~i~~d~~~~-------~~-----------------------~--------------------------------- 573 (648)
++++++++.|..+. ++ .
T Consensus 616 ~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (785)
T PLN00148 616 QSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSSSLLMVSEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSR 695 (785)
T ss_pred HHHHHHHHhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999975544110 00 0
Q ss_pred --------------CcchHHHHHHHHHhccCceEEEEEeEEEEecCCCchHHHHHHH-HHHHHHhhccCCCCcccCCCCC
Q 006371 574 --------------PVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLA-FYEVLHSNCRSALPALSVPLSQ 638 (648)
Q Consensus 574 --------------~~~~~~e~~~L~~a~~~~~~yflgre~L~~~~~s~~~kr~~i~-lF~~LkrNa~s~~~~f~LP~sr 638 (648)
++..++|++++++|+++|++|++||+.++++++++|+||+++| .|.|||||||++...+++|++|
T Consensus 696 ~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~ 775 (785)
T PLN00148 696 RRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHIS 775 (785)
T ss_pred ccceeecccccccccchHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHH
Confidence 0011468889999999999999999999999999999999999 6999999999999999999999
Q ss_pred EEEEeEEEEC
Q 006371 639 RIEVGMLYEA 648 (648)
Q Consensus 639 VVEVG~~~ei 648 (648)
++||||.|++
T Consensus 776 LleVGM~Y~V 785 (785)
T PLN00148 776 LIEVGMIYYV 785 (785)
T ss_pred eEEcceEEEC
Confidence 9999999986
No 3
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=2e-210 Score=1757.67 Aligned_cols=642 Identities=37% Similarity=0.718 Sum_probs=612.2
Q ss_pred CCcCcchhhhHHHHHHHHHHHhhheeeEEEEeCCCCCChHHHHHHHhhcccccCccCccc--cCCccccc-----ccccc
Q 006371 6 PTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKN--LDSNSIFH-----EGAEN 78 (648)
Q Consensus 6 ~~~~~i~G~lSlIfWtL~liv~iKYv~ivl~adn~GEGGi~aL~sL~~r~~~~~~~~~~~--~~~~~~~~-----~~~~~ 78 (648)
++++||+|+||||||||||++++|||+|||||||||||||||||||+||++|.+.+|+++ |+++++|+ ++.++
T Consensus 135 ~~~~dIlGvLSLIfWtLtLiv~iKYV~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~ 214 (852)
T PLN00151 135 KSEEDVLGALSLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELER 214 (852)
T ss_pred CChhheeeehHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccch
Confidence 589999999999999999999999999999999999999999999999999998888887 77788773 23455
Q ss_pred hhhhhhhhhhchhHHHHHHHHHHhhhhhhhcCccccchhhHhhhhcccccCCCCCCCceeehhHHHHHHHHHHHhhcccc
Q 006371 79 KSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTS 158 (648)
Q Consensus 79 ~~~~~~~l~~~~~~~~~l~~~~l~G~~l~~gDgviTPAiSVlSAveGl~~~~p~~~~~~vv~is~~Il~~LF~~Q~~GT~ 158 (648)
+.++|++||+|++.|.+++++|++|+||++|||+||||||||||||||++..|++++++|+||||+||++||++||+||+
T Consensus 215 ~~~~k~~lE~s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~ 294 (852)
T PLN00151 215 SLKIKERLETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTS 294 (852)
T ss_pred hHHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccch
Confidence 77899999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhcCchhhhhhcceeeeecchhhhhhccCCCCccc
Q 006371 159 RVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSS 238 (648)
Q Consensus 159 ~ig~~FgPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~~~LG~v~L~iTG~EALyADmGHfg~~~ 238 (648)
|||++|||||++||++||++|+|||++|||+||+|+||+|+++||.+||+.||.+||+|+||+||+|||||||||||++|
T Consensus 295 kVg~~FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~s 374 (852)
T PLN00151 295 KVGFAFGPALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRS 374 (852)
T ss_pred hhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccc
Confidence 99999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhhcchhhHhhcCCCcccccccccccccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCc
Q 006371 239 IQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFP 318 (648)
Q Consensus 239 I~~sw~~~V~P~L~lnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~P 318 (648)
||+||+++|||||+|||+||||||++||++.+||||.++|+|++||++++||+||||||||+|||+||+++||++|||||
T Consensus 375 Iqiaw~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fP 454 (852)
T PLN00151 375 IQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFP 454 (852)
T ss_pred eeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEecCCCCCCcccchhhHHHHHHHhheeeEEeCCchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHH
Q 006371 319 RVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFL 398 (648)
Q Consensus 319 r~~i~hTS~~~~GQiYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~ 398 (648)
|+||+|||++++||||||+|||+||++|++++++||||++||||||+||++||++||+|+++||+.+||||++++++|++
T Consensus 455 RvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~ 534 (852)
T PLN00151 455 RLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPV 534 (852)
T ss_pred CceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCcchHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChhHHHhhcCCCCCcccCceEEEEeC
Q 006371 399 VFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTN 478 (648)
Q Consensus 399 ~f~~id~~f~~an~~K~~~Ggw~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpg~avf~t~ 478 (648)
+|+++|++||+||+.||+||||+|+++|++++++|++||+|++++++++.+++++++++.++..+.++.||||+|+|+|+
T Consensus 535 ~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~ 614 (852)
T PLN00151 535 VFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNE 614 (852)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999887777667899999999999
Q ss_pred CCCCCccchhhhhhccCcccceEEEEEEEEeeecccCCCCccEEEEEecCC--CEEEEEEEEeeccccCCcccchHHHHH
Q 006371 479 IHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLK--GVYGCVIQYGYADTLNLEGNDFVNQVT 556 (648)
Q Consensus 479 ~~~~~vP~~l~h~l~~~~~lhe~vvfltI~~~~vP~V~~~~R~~V~~l~~~--g~yrv~lryGF~e~p~~~~~~f~~~iL 556 (648)
+ ++++|++|.||++|||++||++||+|||++|+|+|+++|||++++++++ ++|||++||||||....++++|+++++
T Consensus 615 ~-~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv 693 (852)
T PLN00151 615 L-VKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLI 693 (852)
T ss_pred C-CCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHH
Confidence 9 9999999999999999999999999999999999999999999999932 799999999999986547889999999
Q ss_pred HHHHHhhhhhccC------------CC-------------------CC--------------------------------
Q 006371 557 DCLREHIEKYLDC------------LP-------------------SN-------------------------------- 573 (648)
Q Consensus 557 ~~L~~~i~~d~~~------------~~-------------------~~-------------------------------- 573 (648)
++++++++.|..+ .+ +.
T Consensus 694 ~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 773 (852)
T PLN00151 694 ESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMS 773 (852)
T ss_pred HHHHHHHHhhhhhccccccccccccccccccccccccCCCcccccccccccccccccccccccccccccccccccccccc
Confidence 9999997654411 00 00
Q ss_pred ---CcchHHHHHHHHHhccCceEEEEEeEEEEecCCCchHHHHHHH-HHHHHHhhccCCCCcccCCCCCEEEEeEEEEC
Q 006371 574 ---PVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLA-FYEVLHSNCRSALPALSVPLSQRIEVGMLYEA 648 (648)
Q Consensus 574 ---~~~~~~e~~~L~~a~~~~~~yflgre~L~~~~~s~~~kr~~i~-lF~~LkrNa~s~~~~f~LP~srVVEVG~~~ei 648 (648)
.+..++|++++++|+++|++|++||+.++++++++|+||+++| .|.|||||||++...+++|+++++||||.|++
T Consensus 774 ~~~~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 774 SDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred cccCccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 0012468889999999999999999999999999999999999 78999999999999999999999999999986
No 4
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=1.1e-208 Score=1738.92 Aligned_cols=642 Identities=39% Similarity=0.712 Sum_probs=604.3
Q ss_pred CCCcCcchhhhHHHHHHHHHHHhhheeeEEEEeCCCCCChHHHHHHHhhcccccCccCccc--cCCccccc----ccccc
Q 006371 5 SPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKN--LDSNSIFH----EGAEN 78 (648)
Q Consensus 5 ~~~~~~i~G~lSlIfWtL~liv~iKYv~ivl~adn~GEGGi~aL~sL~~r~~~~~~~~~~~--~~~~~~~~----~~~~~ 78 (648)
.|+++||+|++|||||||||+||+|||+++|||||||||||||||||++|+.|.+..|+++ |+++++++ ++.++
T Consensus 29 ~~~~~~ilGvlSLIfWtL~livtiKYv~ivlrAdn~GEGGi~AL~sL~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (688)
T TIGR00794 29 FPTERDIFGVLSLIFWLLTFIVSFKYIFIVLRADNNGEGGTFALYSLIGRYAKISARPVHQELDRAESSYSTKSPNLLNK 108 (688)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhccccCCCcccchhhhhhhcccccccccch
Confidence 4789999999999999999999999999999999999999999999999999887777765 56666663 23455
Q ss_pred hhhhhhhhhhchhHHHHHHHHHHhhhhhhhcCccccchhhHhhhhcccccCCCCCCCceeehhHHHHHHHHHHHhhcccc
Q 006371 79 KSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTS 158 (648)
Q Consensus 79 ~~~~~~~l~~~~~~~~~l~~~~l~G~~l~~gDgviTPAiSVlSAveGl~~~~p~~~~~~vv~is~~Il~~LF~~Q~~GT~ 158 (648)
..+.|+++|++++.|++++++|++|+||++|||+||||||||||||||+++.|++++++|+|+||+||++||++||+||+
T Consensus 109 ~~~~~~~le~~~~~~~~l~~~~l~G~al~~gDgviTPAiSVLSAVeGl~v~~p~~~~~~Vv~it~~ILv~LF~iQ~~GT~ 188 (688)
T TIGR00794 109 TTSLKTKLELSKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGLEIVAPSLSDTWVVPISCIILVLLFLIQRFGTA 188 (688)
T ss_pred hhHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCCCCCCeehhHHHHHHHHHHHHhccccH
Confidence 57799999999888889999999999999999999999999999999999999998899999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhcCchhhhhhcceeeeecchhhhhhccCCCCccc
Q 006371 159 RVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSS 238 (648)
Q Consensus 159 ~ig~~FgPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~~~LG~v~L~iTG~EALyADmGHfg~~~ 238 (648)
|||++|||||++||+++|++|+|||++|||+||+|+||+||++||.+||..||.+||+|+||+||+||||||||||||+|
T Consensus 189 kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~~~~~~LG~V~L~iTGaEALyADmGHFg~~~ 268 (688)
T TIGR00794 189 KVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGTVGWVSLGGVVLSITGVEAMFADLGHFGKLP 268 (688)
T ss_pred HHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCCceeeeccchhheeccHhhhhcccCCCCccc
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhhcchhhHhhcCCCcccccccccccccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCc
Q 006371 239 IQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFP 318 (648)
Q Consensus 239 I~~sw~~~V~P~L~lnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~P 318 (648)
||+||+++|||||+|||+|||||+++||++.+||||.++|+|++||++++||+||||||||+|||+||+++||++|||||
T Consensus 269 Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vlAtlAtIIASQA~IsG~FSl~~Qai~Lg~~P 348 (688)
T TIGR00794 269 IQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFIIATLAAIIASQAVISGVFSITSQAVRLGCFP 348 (688)
T ss_pred ceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEecCCCCCCcccchhhHHHHHHHhheeeEEeCCchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHH
Q 006371 319 RVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFL 398 (648)
Q Consensus 319 r~~i~hTS~~~~GQiYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~ 398 (648)
|+||+|||++++||||||+|||+||++|+++|++||||+|||+|||+|||+||++||+|++++++.+||||+++++++++
T Consensus 349 r~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~ 428 (688)
T TIGR00794 349 RVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVTGTFLVTTCLMTVVMTIVWKWNIYFVALFLL 428 (688)
T ss_pred CceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhhhhhHHHHHHHHHHHHHHcCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCcchHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChhHHHhhcCCCCC-cccCceEEEEe
Q 006371 399 VFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGV-QRVPGLCFFYT 477 (648)
Q Consensus 399 ~f~~id~~f~~an~~K~~~Ggw~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~rvpg~avf~t 477 (648)
+|+.+|++||+||+.|++||||+|+++|++++++|++|++||+++++++.++++++++|++.+.+..+ .|+||+|+|+|
T Consensus 429 ~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~l~rvpG~avf~t 508 (688)
T TIGR00794 429 VFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDHEHRVSISALIASLQPKPGLVRVPGIGIYYS 508 (688)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHhhcCCCcccCCeEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999997765443 79999999999
Q ss_pred CCCCCCccchhhhhhccCcccceEEEEEEEEeeecccCCCCccEEEEEecC-CCEEEEEEEEeeccccCCcccchHHHHH
Q 006371 478 NIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGL-KGVYGCVIQYGYADTLNLEGNDFVNQVT 556 (648)
Q Consensus 478 ~~~~~~vP~~l~h~l~~~~~lhe~vvfltI~~~~vP~V~~~~R~~V~~l~~-~g~yrv~lryGF~e~p~~~~~~f~~~iL 556 (648)
++ ++++|+++.||++|||++||++||+||+++|+||||++|||+++++++ +|+|||++||||||+|| ..+++.++++
T Consensus 509 ~~-~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~~~g~~rv~~~yGf~e~~~-~~~~l~~~ii 586 (688)
T TIGR00794 509 NL-VNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGPTEGMYRCVIRYGFMDTPN-EPKELAAHIV 586 (688)
T ss_pred CC-ccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcCCCCEEEEEEEecCCcCCC-cHHHHHHHHH
Confidence 99 999999999999999999999999999999999999999999999995 48999999999999997 5678899999
Q ss_pred HHHHHhhhhhccC----CCCCC-----cchHHHHHHHHHhccCceEEEEEeEEEEecCCCchHHHHHHH-HHHHHHhhcc
Q 006371 557 DCLREHIEKYLDC----LPSNP-----VDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLA-FYEVLHSNCR 626 (648)
Q Consensus 557 ~~L~~~i~~d~~~----~~~~~-----~~~~~e~~~L~~a~~~~~~yflgre~L~~~~~s~~~kr~~i~-lF~~LkrNa~ 626 (648)
++++++++.+... ..+.+ .+.++|.++++++.+.+++||+||+++++++++++++||+++ +|.||+||++
T Consensus 587 ~~L~~fi~~~~~~~~~~~~~~~~~~~~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~~~I~~lf~~l~rn~~ 666 (688)
T TIGR00794 587 NSIVEFVEHECGFNLNNLEELSDKRCRMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRKIRVNHVFLFIRRNAR 666 (688)
T ss_pred HHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHHHHHHHHHHHHHHhcc
Confidence 9999886542210 00000 012456666888899999999999999999999999999966 9999999999
Q ss_pred CCCCcccCCCCCEEEEeEEEEC
Q 006371 627 SALPALSVPLSQRIEVGMLYEA 648 (648)
Q Consensus 627 s~~~~f~LP~srVVEVG~~~ei 648 (648)
+++++|++|+||+||+|++|||
T Consensus 667 ~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 667 RAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred ChhhheeCChhhEEEEeeEEEC
Confidence 9999999999999999999997
No 5
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=2e-208 Score=1745.95 Aligned_cols=642 Identities=40% Similarity=0.742 Sum_probs=604.1
Q ss_pred CCCcCcchhhhHHHHHHHHHHHhhheeeEEEEeCCCCCChHHHHHHHhhcccccCccCccc--cCCccccc--------c
Q 006371 5 SPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKN--LDSNSIFH--------E 74 (648)
Q Consensus 5 ~~~~~~i~G~lSlIfWtL~liv~iKYv~ivl~adn~GEGGi~aL~sL~~r~~~~~~~~~~~--~~~~~~~~--------~ 74 (648)
.|+++||+|+||||||||||++++|||+|||||||||||||||||||+||++|.+..|+++ |+++++++ +
T Consensus 54 ~~~~~~ilGvLSLIfWtL~Liv~iKYv~ivlrAdn~GEGGtfALysLl~r~~~~~l~pn~~~~d~~ls~~~~~~~~~~~~ 133 (779)
T PLN00149 54 SETNEEIFGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNCQLADEELSEYKKDSGSSSMP 133 (779)
T ss_pred CCCHHHhhhHHHHHHHHHHHHHhhhhEEEEEEecCCCCchHHHHHHHHHHhccccCCccccchhhhhhhhhccccccccc
Confidence 4899999999999999999999999999999999999999999999999999998888876 67788772 1
Q ss_pred cccchhhhhhhhhhchhHHHHHHHHHHhhhhhhhcCccccchhhHhhhhcccccCCCCCCCcee-ehhHHHHHHHHHHHh
Q 006371 75 GAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLV-EALSAIILIVLFLMQ 153 (648)
Q Consensus 75 ~~~~~~~~~~~l~~~~~~~~~l~~~~l~G~~l~~gDgviTPAiSVlSAveGl~~~~p~~~~~~v-v~is~~Il~~LF~~Q 153 (648)
..+++++.|++||+++..|++++++|++|+||++|||+||||||||||||||++..|...++++ +|+||+||++||++|
T Consensus 134 ~~~~~~~~k~~le~~~~~~~~ll~l~l~G~~m~igDgvlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q 213 (779)
T PLN00149 134 LSGFGSSLKSTLEKHRVLQRFLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQ 213 (779)
T ss_pred cchhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHhccccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHh
Confidence 2234577999999999888999999999999999999999999999999999999966445566 999999999999999
Q ss_pred hccccccccchhhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhcCchhhhhhcceeeeecchhhhhhccCC
Q 006371 154 KFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGH 233 (648)
Q Consensus 154 ~~GT~~ig~~FgPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~~~LG~v~L~iTG~EALyADmGH 233 (648)
|+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||..||.+||+|+||+||+|||||||||
T Consensus 214 ~~GT~kvg~~FgPIml~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGH 293 (779)
T PLN00149 214 HYGTHRVGFLFAPVVLTWLLCISAIGVYNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGH 293 (779)
T ss_pred ccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccC
Confidence 99999999999999999999999999999999889999999999999999999999999999999999999999999999
Q ss_pred CCccchhhhHHHHHHHHHHHhhcchhhHhhcCCC---cccccccccccccchHHHHHHHHHHHHHHHhHhhhhhhhHHHH
Q 006371 234 FNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPN---DHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQ 310 (648)
Q Consensus 234 fg~~~I~~sw~~~V~P~L~lnY~GQgA~ll~~p~---~~~npFf~~~P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Q 310 (648)
|||+|||+||+++|||||+|||+||||||++||+ +.+||||+++|+|++||++++||+||||||||+|||+||+++|
T Consensus 294 F~~~~Ir~aw~~~V~P~L~L~Y~GQaA~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Q 373 (779)
T PLN00149 294 FSQLSIKIAFTSLVYPSLILAYMGQAAYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQ 373 (779)
T ss_pred CCccceeeeehhhHHHHHHHHhhhHHHHHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999997 4566999999999999999999999999999999999999999
Q ss_pred HHhcCCCccceEEecCCCCCCcccchhhHHHHHHHhheeeEEeCCchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCh
Q 006371 311 SVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPS 390 (648)
Q Consensus 311 ai~L~~~Pr~~i~hTS~~~~GQiYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~ 390 (648)
|++||||||+||+|||++++||||||+|||+||++|++++++||||++||+|||+||++||++||+|++++++.+||||+
T Consensus 374 a~~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~ 453 (779)
T PLN00149 374 CSALGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSV 453 (779)
T ss_pred HHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCcchHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChhHHHhhcCCCCCcccC
Q 006371 391 LLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVP 470 (648)
Q Consensus 391 ~~~~~~~~~f~~id~~f~~an~~K~~~Ggw~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvp 470 (648)
+++++|+++|+++|++||+||+.||+||||+|+++|++++++|++||+|++++++++.+++++++++.+...+.++.|||
T Consensus 454 ~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~Rvp 533 (779)
T PLN00149 454 LLAICFIFFFGTIEALYFSASLIKFLEGAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVR 533 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999996666666578999
Q ss_pred ceEEEEeCCCCCCccchhhhhhccCcccceEEEEEEEEeeecccCCCCccEEEEEecCC--CEEEEEEEEeeccccCCcc
Q 006371 471 GLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLK--GVYGCVIQYGYADTLNLEG 548 (648)
Q Consensus 471 g~avf~t~~~~~~vP~~l~h~l~~~~~lhe~vvfltI~~~~vP~V~~~~R~~V~~l~~~--g~yrv~lryGF~e~p~~~~ 548 (648)
|+|+|+|++ .+++|++|.||++|||++||++||+|||++|+|+||++|||++++++++ ++|||++||||||.. .++
T Consensus 534 G~~vf~t~~-~~gvP~~f~h~~~~~~~lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~-~d~ 611 (779)
T PLN00149 534 GIGLIHTEL-VSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVH-KDD 611 (779)
T ss_pred cEEEEEcCC-CCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeecccc-ccc
Confidence 999999999 9999999999999999999999999999999999999999999999933 299999999999985 478
Q ss_pred cchHHHHHHHHHHhhhhhccCC----------C--------------------CC-------------------------
Q 006371 549 NDFVNQVTDCLREHIEKYLDCL----------P--------------------SN------------------------- 573 (648)
Q Consensus 549 ~~f~~~iL~~L~~~i~~d~~~~----------~--------------------~~------------------------- 573 (648)
++|+++++++++++++.|..+. + +.
T Consensus 612 ~dFE~~Lve~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (779)
T PLN00149 612 MEFEKDLVCSIAEFIRSEKPEPNGAPENEEGEDERMTVVGTCSTHLEGIQLREDDSDKQEPAGTSELREIRSPPVSRPKK 691 (779)
T ss_pred hHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccCccccCccc
Confidence 9999999999999976543100 0 00
Q ss_pred ------------CcchHHHHHHHHHhccCceEEEEEeEEEEecCCCchHHHHHHH-HHHHHHhhccCCCCcccCCCCCEE
Q 006371 574 ------------PVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLA-FYEVLHSNCRSALPALSVPLSQRI 640 (648)
Q Consensus 574 ------------~~~~~~e~~~L~~a~~~~~~yflgre~L~~~~~s~~~kr~~i~-lF~~LkrNa~s~~~~f~LP~srVV 640 (648)
++..++|++.+++|+++|++|++||++++++++++|+||+++| .|.|||||||++...+++|++|++
T Consensus 692 ~~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~Ll 771 (779)
T PLN00149 692 RVRFVVPESPKIDRGAREELQELMEAREAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTL 771 (779)
T ss_pred ceeeccccccccchhHHHHHHHHHHHHHcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeE
Confidence 0012478889999999999999999999999999999999999 999999999999999999999999
Q ss_pred EEeEEEEC
Q 006371 641 EVGMLYEA 648 (648)
Q Consensus 641 EVG~~~ei 648 (648)
||||.||+
T Consensus 772 eVGmvY~v 779 (779)
T PLN00149 772 EVGMVYHV 779 (779)
T ss_pred EeceEEEC
Confidence 99999986
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=4.2e-203 Score=1671.07 Aligned_cols=579 Identities=32% Similarity=0.572 Sum_probs=557.3
Q ss_pred CCCcCcchhhhHHHHHHHHHHHhhheeeEEEEeCCCCCChHHHHHHHhhcccccCccCccccCCcccccccccchhhhhh
Q 006371 5 SPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGK 84 (648)
Q Consensus 5 ~~~~~~i~G~lSlIfWtL~liv~iKYv~ivl~adn~GEGGi~aL~sL~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (648)
+++++||+|++||||||||++||+|||+++|||||||||||||||||++|+.+
T Consensus 43 ~~~~~~vlGvlSLIfWtL~livtiKYv~ivlrADn~GEGGi~AL~aL~~~~~~--------------------------- 95 (622)
T PRK10745 43 GVERDAVFGFLSLIFWLLILVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTS--------------------------- 95 (622)
T ss_pred CCChhHeehhhHHHHHHHHHHHHHHhheEEEecCCCCCchHHHHHHHHhhhcc---------------------------
Confidence 37999999999999999999999999999999999999999999999987541
Q ss_pred hhhhchhHHHHHHHHHHhhhhhhhcCccccchhhHhhhhcccccCCCCCCCceeehhHHHHHHHHHHHhhccccccccch
Q 006371 85 FFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFLF 164 (648)
Q Consensus 85 ~l~~~~~~~~~l~~~~l~G~~l~~gDgviTPAiSVlSAveGl~~~~p~~~~~~vv~is~~Il~~LF~~Q~~GT~~ig~~F 164 (648)
++.|.+++++|++|+||++|||+|||||||||||||||+++|++ +++|+||||+||++||++||+||+|||++|
T Consensus 96 -----~~~~~~l~~lgl~Gaal~~gDgvITPAISVLSAVEGL~v~~p~l-~~~Vvpit~~ILv~LF~iQ~~GT~~vG~~F 169 (622)
T PRK10745 96 -----ARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQL-DTYIVPLSIIVLTLLFMIQKHGTGMVGKLF 169 (622)
T ss_pred -----cchhHHHHHHHHHHHHHHhhccccchhHHHHHHhhcccccCCCC-CCccHHHHHHHHHHHHHHhccccHHHhhhh
Confidence 23456889999999999999999999999999999999999999 679999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhcCchhhhhhcceeeeecchhhhhhccCCCCccchhhhHH
Q 006371 165 SPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQMAFL 244 (648)
Q Consensus 165 gPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~~~LG~v~L~iTG~EALyADmGHfg~~~I~~sw~ 244 (648)
||||++||+++|++|+|||.+ ||+||+|+||+||++|+.+||..||.+||+|+||+|||||||||||||||+|||+||+
T Consensus 170 gPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~~~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~ 248 (622)
T PRK10745 170 APIMLTWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWF 248 (622)
T ss_pred hhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHHhCCCceEEEecceeeeccchHHHhhccCCCCccceeeeeh
Confidence 999999999999999999997 7999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhhHhhcCCCcccccccccccccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCccceEEe
Q 006371 245 FTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVH 324 (648)
Q Consensus 245 ~~V~P~L~lnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr~~i~h 324 (648)
++|||||+|||+||||++++||++.+||||+++|+|++||++++||+||||||||+|||+||++|||++|||+||+||+|
T Consensus 249 ~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~h 328 (622)
T PRK10745 249 TVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIH 328 (622)
T ss_pred hhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccchhhHHHHHHHhheeeEEeCCchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Q 006371 325 TSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFTME 404 (648)
Q Consensus 325 TS~~~~GQiYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id 404 (648)
||++++||||||+|||+||++|++++++||||+|||+|||+|||+||++||+|++++++.+|||+++++++++++|+++|
T Consensus 329 TS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id 408 (622)
T PRK10745 329 TSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCID 408 (622)
T ss_pred CCCccCCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhhhheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccCCcchHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChhHHHhhcCCCCCcccCceEEEEeCCCCCCc
Q 006371 405 GVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGL 484 (648)
Q Consensus 405 ~~f~~an~~K~~~Ggw~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpg~avf~t~~~~~~v 484 (648)
++||+||+.|++||||+|+++|++++++|+||++||+++++++.++++++++|++++++.++.|+||+|+|+|+. ++++
T Consensus 409 ~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~-~~~v 487 (622)
T PRK10745 409 IPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRA-INVI 487 (622)
T ss_pred HHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCC-CCCC
Confidence 999999999999999999999999999999999999999999999999999999999877777999999999999 9999
Q ss_pred cchhhhhhccCcccceEEEEEEEEeeecccCCCCccEEEEEecCCCEEEEEEEEeeccccCCcccchHHHHHHHHHHh-h
Q 006371 485 TPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGVYGCVIQYGYADTLNLEGNDFVNQVTDCLREH-I 563 (648)
Q Consensus 485 P~~l~h~l~~~~~lhe~vvfltI~~~~vP~V~~~~R~~V~~l~~~g~yrv~lryGF~e~p~~~~~~f~~~iL~~L~~~-i 563 (648)
|+++.||+||||++||++||+||+++|+|||+++||+++++++ +|+|||++||||||+|| ++++++++++. .
T Consensus 488 P~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l~-~g~~rv~~~yGf~e~~~------i~~~L~~~~~~g~ 560 (622)
T PRK10745 488 PFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLS-PTFWRVVASYGWRETPN------VEEVFHRCGLEGL 560 (622)
T ss_pred CHHHHHHhhcCCccceEEEEEEEEECCCcccCcccEEEEEEEC-CCEEEEEEEecCCCCCC------HHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999 99999999999999998 69999887543 2
Q ss_pred hhhccCCCCCCcchHHHHHHHHHhccCceEEEEEeEEEEecCCCchHHHHHHHHHHHHHhhccCCCCcccCCCCCEEEEe
Q 006371 564 EKYLDCLPSNPVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLAFYEVLHSNCRSALPALSVPLSQRIEVG 643 (648)
Q Consensus 564 ~~d~~~~~~~~~~~~~e~~~L~~a~~~~~~yflgre~L~~~~~s~~~kr~~i~lF~~LkrNa~s~~~~f~LP~srVVEVG 643 (648)
+.| .++++||+|||+++++++++ +.+|+.++|.+|+||+++++++|++|+|||||+|
T Consensus 561 ~~~----------------------~~~~s~fl~r~~l~~~~~~~-m~~wr~~lF~~m~rna~~~~~~f~lP~~rvvelG 617 (622)
T PRK10745 561 SCR----------------------MMETSFFMSHESLILGKRPW-YLRLRGKLFLLLQRNALRAPDQFEIPPNRVIELG 617 (622)
T ss_pred CCC----------------------ccceEEEEeeEEEEeCCCCC-cHHHHHHHHHHHHHcCCCHHHHhCCCcccEEEEe
Confidence 222 15789999999999887777 8888888999999999999999999999999999
Q ss_pred EEEEC
Q 006371 644 MLYEA 648 (648)
Q Consensus 644 ~~~ei 648 (648)
+|+|+
T Consensus 618 ~~v~i 622 (622)
T PRK10745 618 TQVEI 622 (622)
T ss_pred eEEeC
Confidence 99996
No 7
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-197 Score=1585.17 Aligned_cols=578 Identities=35% Similarity=0.647 Sum_probs=561.6
Q ss_pred CCCcCcchhhhHHHHHHHHHHHhhheeeEEEEeCCCCCChHHHHHHHhhcccccCccCccccCCcccccccccchhhhhh
Q 006371 5 SPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGK 84 (648)
Q Consensus 5 ~~~~~~i~G~lSlIfWtL~liv~iKYv~ivl~adn~GEGGi~aL~sL~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (648)
..++++|+|++||||||||+|||+|||+++|||||||||||++|++|++|..+
T Consensus 49 ~v~~~~VlGvlSLi~WtLtlIVTiKYv~~vlRADN~GEGGilsL~aL~~~~~~--------------------------- 101 (627)
T COG3158 49 GVSRDEVLGVLSLIIWTLTLIVTIKYVLFVLRADNNGEGGILSLMALARRAAP--------------------------- 101 (627)
T ss_pred CCCcceeeeHHHHHHHHHHHHHHHhhheeEEecCCCCCchhhhHHHHHHhhcC---------------------------
Confidence 46799999999999999999999999999999999999999999999999752
Q ss_pred hhhhchhHHHHHHHHHHhhhhhhhcCccccchhhHhhhhcccccCCCCCCCceeehhHHHHHHHHHHHhhccccccccch
Q 006371 85 FFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFLF 164 (648)
Q Consensus 85 ~l~~~~~~~~~l~~~~l~G~~l~~gDgviTPAiSVlSAveGl~~~~p~~~~~~vv~is~~Il~~LF~~Q~~GT~~ig~~F 164 (648)
|...++.++|++|+|+|+|||+||||||||||||||++++|.+ +++|+|+|++||++||++||+||++||++|
T Consensus 102 ------~~~~~l~~~g~iGaalf~GD~vITPAiSVlSAvEGL~iv~p~~-~~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~F 174 (627)
T COG3158 102 ------RRTALLIILGLIGAALFYGDAVITPAISVLSAVEGLEIVTPAL-DPYVVPITLIILVLLFLIQRFGTGRVGKLF 174 (627)
T ss_pred ------CCchhhhhHHHHhHHHHhcccccchhHHHHHHhccccccCccc-cCccHHHHHHHHHHHHHHhcccchhhhhhh
Confidence 3356999999999999999999999999999999999999998 689999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhcCchhhhhhcceeeeecchhhhhhccCCCCccchhhhHH
Q 006371 165 SPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQMAFL 244 (648)
Q Consensus 165 gPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~~~LG~v~L~iTG~EALyADmGHfg~~~I~~sw~ 244 (648)
||||++||.++|+.|++||.+ ||+||+|+||+||++|+.++|..||++||+||||+|||||||||||||||+|||.||+
T Consensus 175 GPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~fl~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf 253 (627)
T COG3158 175 GPVMLLWFLALAVLGLINIID-DPEILRAINPYYAVHFLLEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWF 253 (627)
T ss_pred ccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHHHHhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHH
Confidence 999999999999999999997 7999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcchhhHhhcCCCcccccccccccccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCccceEEe
Q 006371 245 FTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVH 324 (648)
Q Consensus 245 ~~V~P~L~lnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr~~i~h 324 (648)
++|+|||+|||+||||++|+|||+..||||.++|+|+++|+++|||+||||||||+|||+||++|||++||++|||||.|
T Consensus 254 ~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~aliP~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~ 333 (627)
T COG3158 254 FVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALIPLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRH 333 (627)
T ss_pred HHHHHHHHHHHccccceeccCcccccCcHHHhChhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccchhhHHHHHHHhheeeEEeCCchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Q 006371 325 TSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFTME 404 (648)
Q Consensus 325 TS~~~~GQiYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id 404 (648)
||+++.||||||.|||+|+++++.++++||+|+|||+|||+|||+||++||+|++.++++.|||+++.+.++.+.|+++|
T Consensus 334 TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAYGiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id 413 (627)
T COG3158 334 TSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAYGIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAID 413 (627)
T ss_pred cCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHhhChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccCCcchHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChhHHHhhcCCCCCcccCceEEEEeCCCCCCc
Q 006371 405 GVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGL 484 (648)
Q Consensus 405 ~~f~~an~~K~~~Ggw~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpg~avf~t~~~~~~v 484 (648)
..||+||+.|++||||+|+++|++++++|+||++|++++.++.+++++++|+|++++++.++.|+||||||+|+. ++.+
T Consensus 414 ~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~-~~~v 492 (627)
T COG3158 414 ILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQILFEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRD-PDVV 492 (627)
T ss_pred HHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHHHHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCC-CCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred cchhhhhhccCcccceEEEEEEEEeeecccCCCCccEEEEEecCCCEEEEEEEEeeccccCCcccchHHHHHHHHHHh-h
Q 006371 485 TPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGVYGCVIQYGYADTLNLEGNDFVNQVTDCLREH-I 563 (648)
Q Consensus 485 P~~l~h~l~~~~~lhe~vvfltI~~~~vP~V~~~~R~~V~~l~~~g~yrv~lryGF~e~p~~~~~~f~~~iL~~L~~~-i 563 (648)
|.+++||+|||+++||++||+|++++|+|||++++|+++++++ ++++|++++|||||+|| ++++++.|++. .
T Consensus 493 P~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve~l~-~~f~rV~l~~Gfme~pn------vp~~l~~~~~~G~ 565 (627)
T COG3158 493 PRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVEQLS-DDFVRVVLHFGFMETPN------VPRALRLCRKKGL 565 (627)
T ss_pred cHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeeeeecc-CceEEEEEEeeccCCCC------HHHHHHHHhhcCc
Confidence 9999999999999999999999999999999999999999999 88999999999999999 69999998865 2
Q ss_pred hhhccCCCCCCcchHHHHHHHHHhccCceEEEEEeEEEEecCCCchHHHHHHHHHHHHHhhccCCCCcccCCCCCEEEEe
Q 006371 564 EKYLDCLPSNPVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLAFYEVLHSNCRSALPALSVPLSQRIEVG 643 (648)
Q Consensus 564 ~~d~~~~~~~~~~~~~e~~~L~~a~~~~~~yflgre~L~~~~~s~~~kr~~i~lF~~LkrNa~s~~~~f~LP~srVVEVG 643 (648)
++|. ++++||++||+++++++++ +.+|+.++|.+|+||+.++++||+||+|||||+|
T Consensus 566 ~f~i----------------------m~tsFfl~re~l~~~~~~g-~~~w~~~lfi~l~r~aa~~~~~F~lp~~rvvElG 622 (627)
T COG3158 566 KFDI----------------------METSFFLSRESLIASKNSG-MPRWRDRLFIALARNAASPTDYFKLPPNRVVELG 622 (627)
T ss_pred eecc----------------------cceEEEEEeeeeecCCCCC-chHHHHHHHHHHHHhcCCHHHhhCCCCCcEEEee
Confidence 2221 5789999999999988877 8999999999999999999999999999999999
Q ss_pred EEEEC
Q 006371 644 MLYEA 648 (648)
Q Consensus 644 ~~~ei 648 (648)
+++||
T Consensus 623 tqveI 627 (627)
T COG3158 623 TQVEI 627 (627)
T ss_pred eeeeC
Confidence 99997
No 8
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=1e-186 Score=1530.01 Aligned_cols=506 Identities=45% Similarity=0.849 Sum_probs=495.2
Q ss_pred CCCCcCcchhhhHHHHHHHHHHHhhheeeEEEEeCCCCCChHHHHHHHhhcccccCccCccccCCcccccccccchhhhh
Q 006371 4 KSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLG 83 (648)
Q Consensus 4 ~~~~~~~i~G~lSlIfWtL~liv~iKYv~ivl~adn~GEGGi~aL~sL~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (648)
.+++++||+|++||||||||+++++||++++|||||||||||||||||++|..
T Consensus 29 ~~~~~~~vlG~lSlIfWtL~liv~iKYv~ivlradn~GEGGi~aL~sL~~~~~--------------------------- 81 (534)
T PF02705_consen 29 LPPTEENVLGVLSLIFWTLTLIVTIKYVLIVLRADNNGEGGIFALYSLIRRFL--------------------------- 81 (534)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHheEEEEEEeCCCCChhHHHHHHHHHHhh---------------------------
Confidence 56899999999999999999999999999999999999999999999999643
Q ss_pred hhhhhchhHHHHHHHHHHhhhhhhhcCccccchhhHhhhhcccccCCCCCCCceeehhHHHHHHHHHHHhhccccccccc
Q 006371 84 KFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFL 163 (648)
Q Consensus 84 ~~l~~~~~~~~~l~~~~l~G~~l~~gDgviTPAiSVlSAveGl~~~~p~~~~~~vv~is~~Il~~LF~~Q~~GT~~ig~~ 163 (648)
|++++.+..++++|++|+||++|||+||||||||||||||++.+|++ +++|+|+||+||++||++||+||+|||++
T Consensus 82 ---~~~~~~~~~l~~l~l~G~al~~gDgviTPAISVlSAvEGl~v~~p~~-~~~Vv~it~~ILv~LF~iQ~~GT~~ig~~ 157 (534)
T PF02705_consen 82 ---KSSKRRRWLLLILGLLGAALFYGDGVITPAISVLSAVEGLEVATPSL-EPYVVPITIAILVGLFAIQRFGTAKIGKL 157 (534)
T ss_pred ---ccchhHHHHHHHHHHHHhhhhhcceeecchHHHHHHhhhhhccCCCC-cceehhHHHHHHHHHHHHHhhhhhHHHHH
Confidence 22445556679999999999999999999999999999999999999 58999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhcCchhhhhhcceeeeecchhhhhhccCCCCccchhhhH
Q 006371 164 FSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQMAF 243 (648)
Q Consensus 164 FgPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~~~LG~v~L~iTG~EALyADmGHfg~~~I~~sw 243 (648)
|||||++||+++|++|+|||.++ |+||+|+||+||++||.+||+.||.+||+|+||+||+||||||||||||+|||+||
T Consensus 158 FgPim~~WF~~l~~~G~~~I~~~-p~Vl~A~nP~yai~f~~~~~~~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw 236 (534)
T PF02705_consen 158 FGPIMLLWFLTLGVLGLYNIIQH-PEVLKALNPYYAIRFFIRNGWIGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAW 236 (534)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhC-HHHHHHhCHHHHHHHHHHcCCchhhhcchHHHHHhhHHHHHhhhccccchhhhhhH
Confidence 99999999999999999999995 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcchhhHhhcCCCcccccccccccccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCccceEE
Q 006371 244 LFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVV 323 (648)
Q Consensus 244 ~~~V~P~L~lnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr~~i~ 323 (648)
+++|||||+|||+||||++++||++.+||||+++|+|++||++++||+||||||||+|||+||++|||++||||||+||+
T Consensus 237 ~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~ 316 (534)
T PF02705_consen 237 FFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVILATLATIIASQAVISGAFSLTRQAIQLGYFPRLKIV 316 (534)
T ss_pred HHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCcccchhhHHHHHHHhheeeEEeCCchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHH
Q 006371 324 HTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFTM 403 (648)
Q Consensus 324 hTS~~~~GQiYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~i 403 (648)
|||++++||||||+|||+||++|++++++||||+|||+|||+||++||++||+|++++++.+||||++++.+++++|+++
T Consensus 317 hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~i 396 (534)
T PF02705_consen 317 HTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVTGTMLITTILLFLVMRRVWKWPLWLALLFFLFFLVI 396 (534)
T ss_pred ECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccCCcchHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChhHHHhhcCCCCCcccCceEEEEeCCCCCC
Q 006371 404 EGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDG 483 (648)
Q Consensus 404 d~~f~~an~~K~~~Ggw~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpg~avf~t~~~~~~ 483 (648)
|+.||+||+.|++||||+|+++|++++++|+||++||+++++++++++++++++.++.++.+..|+||+|+|+|+. +++
T Consensus 397 d~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~-~~~ 475 (534)
T PF02705_consen 397 DLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFERENKLPLDDFLELLEDQSIPRVPGTAVFLTRS-PDG 475 (534)
T ss_pred HHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhhhhCCCceecceEEEEcCC-Ccc
Confidence 9999999999999999999999999999999999999999999999999999999999998999999999999999 999
Q ss_pred ccchhhhhhccCcccceEEEEEEEEeeecccCCCCccEEEEEecCCCEEEEEEEEeecc
Q 006371 484 LTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGVYGCVIQYGYAD 542 (648)
Q Consensus 484 vP~~l~h~l~~~~~lhe~vvfltI~~~~vP~V~~~~R~~V~~l~~~g~yrv~lryGF~e 542 (648)
+|+++.||+|||+++||+++|++++++|+|+||++|||++++++++|+|||++||||||
T Consensus 476 vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 476 VPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGPDGFYRVTLRYGFME 534 (534)
T ss_pred CcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecCCCEEEEEEEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999998
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=94.69 E-value=0.25 Score=55.86 Aligned_cols=103 Identities=11% Similarity=0.099 Sum_probs=52.3
Q ss_pred eehhHHHHHHHHHHHhhccccccccc---hhhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhcCchhhh-h
Q 006371 138 VEALSAIILIVLFLMQKFGTSRVSFL---FSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWL-L 213 (648)
Q Consensus 138 vv~is~~Il~~LF~~Q~~GT~~ig~~---FgPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~~-~ 213 (648)
...+++++++++..+.-+|.+..+++ +.-+.++=++.+.+.|++.+.+.++. ..+|...+.-. .++..+|. .
T Consensus 165 ~~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~-~~~~~~~~~a 240 (501)
T TIGR00911 165 IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGT-ETSAGGIVLA 240 (501)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCC-CCcHHHHHHH
Confidence 34577888888999999998776653 33332222233345565554431111 12332221100 01223443 4
Q ss_pred hcceeeeecchhhhhhccC--CCCccchhhhHH
Q 006371 214 LGGTVLCITGSEALFADLG--HFNRSSIQMAFL 244 (648)
Q Consensus 214 LG~v~L~iTG~EALyADmG--Hfg~~~I~~sw~ 244 (648)
+..++.+.+|-|+.=.--| +--+|+|.++-.
T Consensus 241 ~~~~~~af~G~e~~~~~a~E~knP~r~iPrAi~ 273 (501)
T TIGR00911 241 FYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAII 273 (501)
T ss_pred HHHHHHHHHhHHHHhhhHHHhcCchhhhHHHHH
Confidence 6677888888886433222 333455655544
No 10
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=91.02 E-value=2.6 Score=46.24 Aligned_cols=258 Identities=14% Similarity=0.092 Sum_probs=139.0
Q ss_pred CccccchhhHhhhhcccccC-CCCCCC-c-eeehhHHHHHHHHHHHhhccccccccchh---hHHH-HHHHHHHHHHHHH
Q 006371 110 DGILTPAISVLSAMDGIRAP-FPSVSK-S-LVEALSAIILIVLFLMQKFGTSRVSFLFS---PIMG-AWTFSTPLVGIYS 182 (648)
Q Consensus 110 DgviTPAiSVlSAveGl~~~-~p~~~~-~-~vv~is~~Il~~LF~~Q~~GT~~ig~~Fg---Pim~-~WF~~l~~~G~~~ 182 (648)
+-+.+.+....++.+-+... .|+..+ + ....+++++++....+.-+|.+..+++-. =+.+ .-++.+.+.|++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~ 166 (426)
T PF13520_consen 87 AYILSLASVASSFASYLLSLFGPDLNPSPWPQFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVS 166 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTGGGTCSHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EeeccccccccchhhhhhhccccccccccchheeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEee
Confidence 34444444555555555443 233321 1 23457788888899999999887776433 2333 3444555666665
Q ss_pred hhccCcce-----eeecCHHHHHHHHhhcCch-hhhhhcceeeeecchhhhhhccCCCCccchhhhHHHHHHHHHHHhhc
Q 006371 183 IIHHYPGI-----FKALSPHYTFHFFWRKGKE-GWLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYA 256 (648)
Q Consensus 183 i~~~~p~V-----l~AlnP~ya~~f~~~~~~~-~~~~LG~v~L~iTG~EALyADmGHfg~~~I~~sw~~~V~P~L~lnY~ 256 (648)
.-++ ..- ....+|. +.. -+..++..+.+.+|-|+.=.-.+-..+|.+.++-..-+.-+.++.-+
T Consensus 167 ~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l 236 (426)
T PF13520_consen 167 FSFS-GFNSLSFSLSTFFPS---------GWPGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYIL 236 (426)
T ss_dssp TTCC-HHH----SHSCSSCS---------SSSHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred eccc-ccccccccccccCCc---------cccchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhh
Confidence 4321 110 1112222 111 25566778889999998655555555677777766433333333333
Q ss_pred chhhHhhcCCCc-c---cc------cccccc-cccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCccceEEec
Q 006371 257 GQTAYLIRHPND-H---ED------GFYKFI-PKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHT 325 (648)
Q Consensus 257 GQgA~ll~~p~~-~---~n------pFf~~~-P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr~~i~hT 325 (648)
..-++...-|++ . +| .+++.. .++..+.+.+.+.++..-+-.+.+.+.--++.+.-+-|.+|+ +..++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~ 315 (426)
T PF13520_consen 237 FSIALLGALPDDELANSSNSPSPFAVLASAVGGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKV 315 (426)
T ss_dssp HHHHHHTTSTHCHHHTTTCHHCHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTT
T ss_pred hhheeeecccchhhhcccccccccchhhccccccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhc
Confidence 333333332221 1 12 222332 357778888888887777777777777777888888999993 23333
Q ss_pred CCCCCCcccchhhHHHHHHHhh-eee--EEe---CCchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 006371 326 SSNKEGEVYSPEVNYILMILCV-AVI--LIF---GEGKDIGNAFGVVVSLVMLITTILLTLVMIV 384 (648)
Q Consensus 326 S~~~~GQiYiP~vNw~L~i~~i-~vv--~~F---~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~ 384 (648)
+ | +|. |..-.++...+. ++. ..| ++.+.+.+.+.++.....+++.+-. +..++
T Consensus 316 ~-k-~~~---P~~a~~~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~ 374 (426)
T PF13520_consen 316 N-K-FGT---PYNAIILVAVISSILLLLFLFIPQSSFDILVSLSSVGYLISYILVILAV-LFLRR 374 (426)
T ss_dssp S-S-SSS---CHHHHHHHHHHHHHHHHHTTTSSSSHHHHHHHHHHHHTHHHHHHHHHHH-HHTHH
T ss_pred c-c-cCC---ceeeehhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhh
Confidence 3 2 232 554444433332 222 223 2335667777776666666664433 33443
No 11
>TIGR00909 2A0306 amino acid transporter.
Probab=88.35 E-value=7.6 Score=42.77 Aligned_cols=211 Identities=13% Similarity=0.108 Sum_probs=99.3
Q ss_pred hhHHHHHHHHHHHhhcccccccc---chhhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhcCchh-hhhhc
Q 006371 140 ALSAIILIVLFLMQKFGTSRVSF---LFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEG-WLLLG 215 (648)
Q Consensus 140 ~is~~Il~~LF~~Q~~GT~~ig~---~FgPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~-~~~LG 215 (648)
.++++++++...+..+|.+..++ .++.+.++=++.+.+.|+.+. ++.-+..+.|. +..+ ...+.
T Consensus 135 ~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~ 202 (429)
T TIGR00909 135 LPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAATA 202 (429)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHHHH
Confidence 35677788888899999776664 566655554444445555433 22222222221 1112 22233
Q ss_pred ceeeeecchhhhhh--ccCCCCccchhhhHHHHHHHHHHHhhcchhhHhhcC-C-C---cccccccc----cccccchHH
Q 006371 216 GTVLCITGSEALFA--DLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRH-P-N---DHEDGFYK----FIPKSVYWP 284 (648)
Q Consensus 216 ~v~L~iTG~EALyA--DmGHfg~~~I~~sw~~~V~P~L~lnY~GQgA~ll~~-p-~---~~~npFf~----~~P~~~~~p 284 (648)
..+.+.+|=|+.-. +-=+-.+|++.++-..-+. ...+.|..-....... | + ..++|+.. ...++..+-
T Consensus 203 ~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~-~~~v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (429)
T TIGR00909 203 LVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLI-VVTLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLI 281 (429)
T ss_pred HHHHHHhhHHHHHhhHHhccCccccccHHHHHHHH-HHHHHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHHHH
Confidence 45566677776543 3334455677776654222 2222244433322221 1 1 11234322 223444444
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCccceEEecCCCCCCcccchhhHHHHHHHhheeeEEeCCchhhhhhhh
Q 006371 285 IFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFG 364 (648)
Q Consensus 285 ~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr~~i~hTS~~~~GQiYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYG 364 (648)
+.+.+.++..-+..+.+.+.==+...+-+.|.+|+. .-+++++ +| .|..--++......+...+.+.+.+.+..+
T Consensus 282 ~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~-~~~~~~~-~~---~P~~a~~~~~~i~~~~~~~~~~~~l~~~~~ 356 (429)
T TIGR00909 282 LTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS-LSKVHPK-TG---TPHMSIIIFSLTAALLASLVPLEGLAELTS 356 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH-HHHcCCC-CC---CcHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 444444444444444444444445555688999972 2222322 12 576533333222222233455555555444
Q ss_pred hHHH
Q 006371 365 VVVS 368 (648)
Q Consensus 365 iaV~ 368 (648)
++..
T Consensus 357 ~~~~ 360 (429)
T TIGR00909 357 IGTL 360 (429)
T ss_pred HHHH
Confidence 4443
No 12
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=87.74 E-value=22 Score=39.15 Aligned_cols=179 Identities=16% Similarity=0.052 Sum_probs=101.0
Q ss_pred eeehhHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhcCchhhhhhcc
Q 006371 137 LVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGG 216 (648)
Q Consensus 137 ~vv~is~~Il~~LF~~Q~~GT~~ig~~FgPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~~~LG~ 216 (648)
....++.+++.+++.++-+|....++...-...+=+..+..+++..+...+......+++... + ......-...++.
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~ 209 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP--G-GGSFGGILAAILL 209 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc--c-cchHHHHHHHHHH
Confidence 467889999999999999999998886665555445544555444444332221222221111 0 0000123455666
Q ss_pred eeeeecchhhh--hhc-cCCCCccchhhhHHHHHHHHHHHhhcchhhHhhcCCC-ccc-----cccccc---cc-ccchH
Q 006371 217 TVLCITGSEAL--FAD-LGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPN-DHE-----DGFYKF---IP-KSVYW 283 (648)
Q Consensus 217 v~L~iTG~EAL--yAD-mGHfg~~~I~~sw~~~V~P~L~lnY~GQgA~ll~~p~-~~~-----npFf~~---~P-~~~~~ 283 (648)
++.+.+|-|+. +|+ +=+ .+|+|-.+-..-..-+.++-.+++-+..-.-|. +.. +|+... .. .+..+
T Consensus 210 ~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~ 288 (466)
T COG0531 210 AFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWGAI 288 (466)
T ss_pred HHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHHHH
Confidence 78899998865 332 444 556666665543333333333333333333232 111 454433 22 35666
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCcc
Q 006371 284 PIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPR 319 (648)
Q Consensus 284 p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr 319 (648)
-+.+++.++..-+..+.+.+.--...+.-+-|++|+
T Consensus 289 ~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 289 IIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 666666666666667777776667777788999998
No 13
>PRK15049 L-asparagine permease; Provisional
Probab=85.93 E-value=15 Score=41.85 Aligned_cols=176 Identities=16% Similarity=0.113 Sum_probs=78.8
Q ss_pred hhHHHHHHHHHHHhhcccccccc---chhhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhh------cCchh
Q 006371 140 ALSAIILIVLFLMQKFGTSRVSF---LFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWR------KGKEG 210 (648)
Q Consensus 140 ~is~~Il~~LF~~Q~~GT~~ig~---~FgPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~------~~~~~ 210 (648)
.++.++++++..+.-+|.+..++ .+.=+.++=.+.+.++|+.-+...+|.--.. ..+.++.. ++..+
T Consensus 146 ~~~~~~~~l~~~iN~~gvk~~~~i~~~~~~iki~~l~~~ii~~i~~~~~~~~~~~~~----~~f~~~~~~~~~~p~g~~~ 221 (499)
T PRK15049 146 VFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNT----TGFHLITDNGGFFPHGLLP 221 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC----cccccccCCCCcccccHHH
Confidence 34677778888899999877766 3333332223333344544333211110000 01111111 22222
Q ss_pred h-hhhcceeeeecchhh--hhhccCCCCccchhhhHHHHHHHHHHHhhcchhhHhh-----cCCCccccccccccc----
Q 006371 211 W-LLLGGTVLCITGSEA--LFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLI-----RHPNDHEDGFYKFIP---- 278 (648)
Q Consensus 211 ~-~~LG~v~L~iTG~EA--LyADmGHfg~~~I~~sw~~~V~P~L~lnY~GQgA~ll-----~~p~~~~npFf~~~P---- 278 (648)
+ ..+..++.+.+|-|. ..|+==+--+|+|-.|-.. +.-...+.|++-...+. ++.++...||....-
T Consensus 222 ~~~~~~~~~faf~G~e~i~~~aeE~knP~r~iPrAi~~-~~~~i~~~yi~~~~~~~~~~p~~~~~~~~sP~~~~~~~~g~ 300 (499)
T PRK15049 222 ALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINS-VIWRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGV 300 (499)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhcChhhHHHHHHHH-HHHHHHHHHHHHHHHHheecchhccCcCCCHHHHHHHHcCc
Confidence 2 223346777888874 3444345556777777653 33333444555322221 122233467644321
Q ss_pred ccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCccc
Q 006371 279 KSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRV 320 (648)
Q Consensus 279 ~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr~ 320 (648)
+++-..+.++..++.+-+..+.+.++--+....-+-|.+|+.
T Consensus 301 ~~~~~ii~~~ilia~~ss~ns~~~~~sR~l~a~Ardg~lP~~ 342 (499)
T PRK15049 301 PYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSF 342 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHH
Confidence 111111222222222222223344444445555678999964
No 14
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=85.86 E-value=25 Score=39.58 Aligned_cols=118 Identities=10% Similarity=0.042 Sum_probs=52.8
Q ss_pred hHHHHHHHHHHHhhccccccccc---hhhH-HHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhh-cCchhhhhhc
Q 006371 141 LSAIILIVLFLMQKFGTSRVSFL---FSPI-MGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWR-KGKEGWLLLG 215 (648)
Q Consensus 141 is~~Il~~LF~~Q~~GT~~ig~~---FgPi-m~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~-~~~~~~~~LG 215 (648)
++++++.++-.++-+|.+..++. ++=+ .++=++.+.++|+......++.. .+..+. +++-+ .+..++...+
T Consensus 126 ~~l~~~~~~~~in~~gv~~~~~i~~~~~~~~~ii~~~~~ii~~~~~~~~g~~~~---~~~~~~-~~~p~~~~~~~~~~~~ 201 (474)
T TIGR03813 126 SVLFVYWLATFIALRGVAAFTKVAKWGGIVGTIIPAAILVILGISYLLTGGESQ---IPLRWD-DAFPDFTNFDNVVLAA 201 (474)
T ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC---CCCCHH-HhCCCccccccHHHHH
Confidence 45555556667899999765543 1111 12222334445555433211111 111110 12211 1223334444
Q ss_pred ceeeeecchhhh--hhccCCCCccchhhhHHHHHHHHHHHhhcchhhHh
Q 006371 216 GTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYL 262 (648)
Q Consensus 216 ~v~L~iTG~EAL--yADmGHfg~~~I~~sw~~~V~P~L~lnY~GQgA~l 262 (648)
+++.+.+|-|.. +|+-=+--+|++-++-..-+.-+.++-.+++-+..
T Consensus 202 ~~~~af~G~e~~~~~a~E~knP~r~iPrAi~~~~~~~~~~y~l~~~~~~ 250 (474)
T TIGR03813 202 SIFLFYAGMEMNAVHVKDVDNPDKNYPIAILIAALGTVLIFVLGTLAIA 250 (474)
T ss_pred HHHHHHhchhHhHHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 556678888753 44433445666666655434334433333333333
No 15
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=83.30 E-value=38 Score=37.72 Aligned_cols=23 Identities=26% Similarity=0.309 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHHhhccccccccc
Q 006371 141 LSAIILIVLFLMQKFGTSRVSFL 163 (648)
Q Consensus 141 is~~Il~~LF~~Q~~GT~~ig~~ 163 (648)
++++++..+..++.+|++..+++
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 34566667888999999887764
No 16
>PRK10655 potE putrescine transporter; Provisional
Probab=82.86 E-value=46 Score=36.90 Aligned_cols=43 Identities=7% Similarity=-0.107 Sum_probs=25.0
Q ss_pred hhHHHHHHHHHHHhhccccccccch---hhHHHHHHHHHHHHHHHH
Q 006371 140 ALSAIILIVLFLMQKFGTSRVSFLF---SPIMGAWTFSTPLVGIYS 182 (648)
Q Consensus 140 ~is~~Il~~LF~~Q~~GT~~ig~~F---gPim~~WF~~l~~~G~~~ 182 (648)
.+++++++.+..+.-+|.+..+++- .-.+++-++.+.+.|...
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666778889999987776642 223333344444455443
No 17
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=82.53 E-value=14 Score=41.66 Aligned_cols=25 Identities=12% Similarity=0.096 Sum_probs=18.7
Q ss_pred ehhHHHHHHHHHHHhhccccccccc
Q 006371 139 EALSAIILIVLFLMQKFGTSRVSFL 163 (648)
Q Consensus 139 v~is~~Il~~LF~~Q~~GT~~ig~~ 163 (648)
..+.+++++++..+.-+|.+..++.
T Consensus 144 ~~i~~~~~~~~~~in~~g~k~~~~~ 168 (482)
T TIGR00907 144 FGIMIGIHLIHALINSLPTKWLPRI 168 (482)
T ss_pred hhhHHHHHHHHHHHHHhhHhHHHHH
Confidence 4566777888889999998766554
No 18
>PRK10746 putative transport protein YifK; Provisional
Probab=80.34 E-value=77 Score=35.77 Aligned_cols=27 Identities=0% Similarity=-0.050 Sum_probs=18.7
Q ss_pred cchHHHHHHHHHHhhhhhhHhHHHHHH
Q 006371 419 GWIPFAISFFLAFIMFGWFNGRQKKIE 445 (648)
Q Consensus 419 gw~pl~ia~~~~~im~~W~~G~~~~~~ 445 (648)
.......+.+.+.++..++...+..++
T Consensus 427 ~~~~~~~~~~~~~~~~~~y~~~~~~~~ 453 (461)
T PRK10746 427 TRMSLFVGIIFLLAVTLIYKVFGLNRH 453 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 456777888888888877776555443
No 19
>PRK10249 phenylalanine transporter; Provisional
Probab=76.85 E-value=55 Score=36.78 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHHhhccccccccc---hhhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHH--HhhcCchh-hhhh
Q 006371 141 LSAIILIVLFLMQKFGTSRVSFL---FSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHF--FWRKGKEG-WLLL 214 (648)
Q Consensus 141 is~~Il~~LF~~Q~~GT~~ig~~---FgPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f--~~~~~~~~-~~~L 214 (648)
.+.++++++..+.-+|.+..+++ +.=+.++..+.+.++|+.-+...++. ...++.+..+. +..++..| +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGG--EKASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC--CCCChhhccCCCCCCCCcHHHHHHHH
Confidence 46677777888899998877653 33344455555556666654432221 01122211000 01123333 3456
Q ss_pred cceeeeecchhhh--hhccCCCCccchhhhHHHHHHHHHHHhhcc
Q 006371 215 GGTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVLTYAG 257 (648)
Q Consensus 215 G~v~L~iTG~EAL--yADmGHfg~~~I~~sw~~~V~P~L~lnY~G 257 (648)
..++.+.+|-|.. .|+=-+--+|+|-++-.. ......+-|++
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~~-~~~~~~~~y~~ 259 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVNQ-VVYRILLFYIG 259 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHH
Confidence 6677888899865 666666777787776654 33344444544
No 20
>PRK10238 aromatic amino acid transporter; Provisional
Probab=75.58 E-value=63 Score=36.30 Aligned_cols=114 Identities=16% Similarity=0.160 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHhhcccccccc---chhhHHHHHHHHHHHHHHHHhhcc--Ccc-eeeecCHHHHHHHHhhcCchhh-hh
Q 006371 141 LSAIILIVLFLMQKFGTSRVSF---LFSPIMGAWTFSTPLVGIYSIIHH--YPG-IFKALSPHYTFHFFWRKGKEGW-LL 213 (648)
Q Consensus 141 is~~Il~~LF~~Q~~GT~~ig~---~FgPim~~WF~~l~~~G~~~i~~~--~p~-Vl~AlnP~ya~~f~~~~~~~~~-~~ 213 (648)
.+++++++++.+.-+|++..++ .+.-+-++-++.+-++|+.-+... +|. .+.-+.+. .-+..++..++ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 4556667778889999887665 233333333333333454433321 121 11111010 00111222222 23
Q ss_pred hcceeeeecchhh--hhhccCCCCccchhhhHHHHHHHHHHHhhcch
Q 006371 214 LGGTVLCITGSEA--LFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQ 258 (648)
Q Consensus 214 LG~v~L~iTG~EA--LyADmGHfg~~~I~~sw~~~V~P~L~lnY~GQ 258 (648)
++.++.+.+|-|. ..|+=-+--+|++-++-.. +.....+.|++=
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~~ 251 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIGS 251 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHHH
Confidence 5567788889887 4455456677888888753 445555666653
No 21
>PRK11021 putative transporter; Provisional
Probab=72.97 E-value=1.3e+02 Score=33.09 Aligned_cols=172 Identities=16% Similarity=0.143 Sum_probs=78.7
Q ss_pred eehhHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHhhc-cCcceeeecCHHHHHHHHhhcCchhh-hhhc
Q 006371 138 VEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIH-HYPGIFKALSPHYTFHFFWRKGKEGW-LLLG 215 (648)
Q Consensus 138 vv~is~~Il~~LF~~Q~~GT~~ig~~FgPim~~WF~~l~~~G~~~i~~-~~p~Vl~AlnP~ya~~f~~~~~~~~~-~~LG 215 (648)
..++++++++.+..+.-+|.+..+++-.=+. ++.+..+++.-... .+++-+ .+++ +..++..++ ..+.
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~ 184 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQTVIA---LLIVALVVAIWWAGDIKPADI-PFPA------PGSIEWSGLFAALG 184 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH---HHHHHHHHHHHHHcCCchhcC-CCCC------CCCccHHHHHHHHH
Confidence 3567788888899999999998887543221 12222233221111 122211 1110 011122222 2344
Q ss_pred ceeeeecchhhh--hhccCCCCccchhhhHHHHHHHHHHHhhcchhhHhhc-----CCCccccccc----ccccccchHH
Q 006371 216 GTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIR-----HPNDHEDGFY----KFIPKSVYWP 284 (648)
Q Consensus 216 ~v~L~iTG~EAL--yADmGHfg~~~I~~sw~~~V~P~L~lnY~GQgA~ll~-----~p~~~~npFf----~~~P~~~~~p 284 (648)
..+.+.+|-|+. +|+==+-.+|++.++-..-+. ...+-|+......+. +++....|+. +...++..+-
T Consensus 185 ~~~~af~G~e~~~~~a~E~k~P~k~iPrAi~~~~~-~~~~lYil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~i 263 (410)
T PRK11021 185 VMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLL-LAGLVYWACTVVVLHFPAYGDKQAAAASLPGIFVQLFGGYALWV 263 (410)
T ss_pred HHHHHHhcHHHHHhhHHhccCccccccHHHHHHHH-HHHHHHHHHHHHHHhcCCCcchhhccccHHHHHHHHhCchhHHH
Confidence 566778888864 444445566777777664333 333335544332221 1111223321 2222332222
Q ss_pred HHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCccc
Q 006371 285 IFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRV 320 (648)
Q Consensus 285 ~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr~ 320 (648)
+.+++.++++-+-.+.+.+.=-+...+-+-|.+||.
T Consensus 264 i~i~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~~ 299 (410)
T PRK11021 264 ICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSY 299 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHH
Confidence 222232333223333333333344555578999963
No 22
>PRK10580 proY putative proline-specific permease; Provisional
Probab=70.35 E-value=86 Score=35.13 Aligned_cols=99 Identities=18% Similarity=0.127 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhhcccccccc---chhhHHHHHHHHHHHHHHHHhhc--cCcceeeecCHHHHHHHHh-----hcCchhh
Q 006371 142 SAIILIVLFLMQKFGTSRVSF---LFSPIMGAWTFSTPLVGIYSIIH--HYPGIFKALSPHYTFHFFW-----RKGKEGW 211 (648)
Q Consensus 142 s~~Il~~LF~~Q~~GT~~ig~---~FgPim~~WF~~l~~~G~~~i~~--~~p~Vl~AlnP~ya~~f~~-----~~~~~~~ 211 (648)
.++++++...++-+|.+..++ .+.-+.++-++.+.++|+.-+.. .++. +|...-+.+. .++..|+
T Consensus 127 ~~~~~~l~~~ln~~gv~~~~~~~~~~~~~~~~~l~~~ii~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~ 201 (457)
T PRK10580 127 VLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGIGIIIWGIGNGG-----QPTGIHNLWSNGGFFSNGWLGM 201 (457)
T ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-----CCCCccccCCCCCCCCcchHHH
Confidence 455566778899999876665 44454444444444455432110 0111 1110000111 1222222
Q ss_pred -hhhcceeeeecchhhh--hhccCCCCccchhhhHHH
Q 006371 212 -LLLGGTVLCITGSEAL--FADLGHFNRSSIQMAFLF 245 (648)
Q Consensus 212 -~~LG~v~L~iTG~EAL--yADmGHfg~~~I~~sw~~ 245 (648)
..+..++.+.+|-|+. .|.--+--+|+|.++-..
T Consensus 202 ~~~~~~~~fsf~G~e~~~~~a~E~knP~k~iPrAi~~ 238 (457)
T PRK10580 202 VMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINS 238 (457)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHhcChhhHHHHHHHH
Confidence 3455667788888865 334445666677776553
No 23
>PRK11387 S-methylmethionine transporter; Provisional
Probab=70.35 E-value=1e+02 Score=34.72 Aligned_cols=21 Identities=10% Similarity=0.102 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHhhcccccccc
Q 006371 142 SAIILIVLFLMQKFGTSRVSF 162 (648)
Q Consensus 142 s~~Il~~LF~~Q~~GT~~ig~ 162 (648)
.+++++.+..+.-+|.+..++
T Consensus 133 ~~~~~~~~~~in~~gvk~~~~ 153 (471)
T PRK11387 133 CLLFCALIFGLNVVSTRFFAE 153 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHH
Confidence 444455677788888877664
No 24
>TIGR00913 2A0310 amino acid permease (yeast).
Probab=70.22 E-value=83 Score=35.32 Aligned_cols=105 Identities=16% Similarity=0.100 Sum_probs=50.6
Q ss_pred hcceeeeecchhhh--hhccCCCCccchhhhHHHHHHHHHHHhhcchhhHhh-cCC-C------------ccccccccc-
Q 006371 214 LGGTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLI-RHP-N------------DHEDGFYKF- 276 (648)
Q Consensus 214 LG~v~L~iTG~EAL--yADmGHfg~~~I~~sw~~~V~P~L~lnY~GQgA~ll-~~p-~------------~~~npFf~~- 276 (648)
+..++.+.+|-|+. +|+==+--+|+|.++-..-+.- ..+-|......+. .-| + ....||...
T Consensus 203 ~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~~~~~-~~~~Y~l~~~~~~~~~p~~~~~l~~~~~~~~~~~~p~~~~~ 281 (478)
T TIGR00913 203 FVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWR-ILVFYILTLFLIGFLVPYNDPRLLSSSSSSDSAASPFVIAI 281 (478)
T ss_pred HHHHHhhhccHHHHHHHHHhhcChhhHHHHHHHHHHHH-HHHHHHHHHHHheeeccCCChhhcccccCCCcCCCcHHHHH
Confidence 33456778888853 4555566677777776542222 2334554322111 112 1 012465422
Q ss_pred --c-cccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCcc
Q 006371 277 --I-PKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPR 319 (648)
Q Consensus 277 --~-P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr 319 (648)
. .++...-+.+.+.++..-+.++.+.++=-++.+.-+-|.+|+
T Consensus 282 ~~~g~~~~~~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~ 327 (478)
T TIGR00913 282 QNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALAHQGLAPK 327 (478)
T ss_pred HHcCCchHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCcccH
Confidence 1 123222333333333333334444454455666678899996
No 25
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=69.71 E-value=72 Score=35.43 Aligned_cols=25 Identities=16% Similarity=0.216 Sum_probs=18.4
Q ss_pred hhHHHHHHHHHHHhhccccccccch
Q 006371 140 ALSAIILIVLFLMQKFGTSRVSFLF 164 (648)
Q Consensus 140 ~is~~Il~~LF~~Q~~GT~~ig~~F 164 (648)
.++++++..+..+.-+|.+..+++-
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i~ 147 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKLE 147 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 3556667777888999998877753
No 26
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=69.64 E-value=1.7e+02 Score=34.02 Aligned_cols=44 Identities=14% Similarity=0.330 Sum_probs=26.6
Q ss_pred ehhHHHHHHHHHHHhhccccccccc---hhhHHHHHHHHHHHHHHHH
Q 006371 139 EALSAIILIVLFLMQKFGTSRVSFL---FSPIMGAWTFSTPLVGIYS 182 (648)
Q Consensus 139 v~is~~Il~~LF~~Q~~GT~~ig~~---FgPim~~WF~~l~~~G~~~ 182 (648)
..+++++++++..+--+|++..+++ +.-+.++-++.+.+.|+..
T Consensus 162 ~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 162 DFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred hHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 4466777777788888998777653 3333333344444555543
No 27
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=69.17 E-value=64 Score=36.36 Aligned_cols=168 Identities=14% Similarity=0.049 Sum_probs=75.2
Q ss_pred hhHHHHHHHHHHHhhccccccccch---hhHHHHHHHHHHHHHHHHhhccCcceee-ecCHHHHHHHHhhcCchhh-hhh
Q 006371 140 ALSAIILIVLFLMQKFGTSRVSFLF---SPIMGAWTFSTPLVGIYSIIHHYPGIFK-ALSPHYTFHFFWRKGKEGW-LLL 214 (648)
Q Consensus 140 ~is~~Il~~LF~~Q~~GT~~ig~~F---gPim~~WF~~l~~~G~~~i~~~~p~Vl~-AlnP~ya~~f~~~~~~~~~-~~L 214 (648)
.+++++++++..+..+|.+..+++- .-+.++=++.+.++|+... +++.+. .++|...- . ..+...++ ..+
T Consensus 131 ~~~~~~~~~~~~ln~~Gi~~~~~i~~~~~~~~l~~l~~~ii~~~~~~---~~~~~~~~~~~~~~p-~-~~~~~~~~~~~~ 205 (473)
T TIGR00905 131 LGASVLLWVFTFLVLRGVRQAAFINTITTIAKLIPLFLFIIIGWFWF---KLDLFTADFWGHDVP-S-LGSVFSQVKNTM 205 (473)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CchhcccccCccCCC-c-ccchHHHHHHHH
Confidence 3556666677889999998776633 3222222233334444331 222221 11111000 0 00001111 123
Q ss_pred cceeeeecchhhh---hhccCCCCccchhhhHHH------HHHHHHHHhhcchhhHhhcCCC---ccccccc-----ccc
Q 006371 215 GGTVLCITGSEAL---FADLGHFNRSSIQMAFLF------TIYPSLVLTYAGQTAYLIRHPN---DHEDGFY-----KFI 277 (648)
Q Consensus 215 G~v~L~iTG~EAL---yADmGHfg~~~I~~sw~~------~V~P~L~lnY~GQgA~ll~~p~---~~~npFf-----~~~ 277 (648)
...+.+.+|-|+. ..++=+ +|++-++-.. +.|.+..+.+.|.. .++ +..+|+. ...
T Consensus 206 ~~~~~af~G~e~~~~~a~E~k~--~r~iPrai~~~~~i~~~~Yil~~~~~~~~~-----~~~~l~~~~~p~~~~~~~~~~ 278 (473)
T TIGR00905 206 LVTLWVFIGIEGAVVSSGRAKN--KSDVGKATVLGTLGALVIYILITLLSLGVL-----PQQELANLPNPSMAAVLEMIV 278 (473)
T ss_pred HHHHHHHHhHHHHHHHHHHHhc--cccchHHHHHHHHHHHHHHHHHHHHHHhCc-----CHHHHhhCCCchHHHHHHHHh
Confidence 4467777888865 223434 4444443332 22222222222211 111 1235632 223
Q ss_pred cccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCcc
Q 006371 278 PKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPR 319 (648)
Q Consensus 278 P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr 319 (648)
.++....+.+.+.+++.-+..+.+.+.=-+..+.-+-|.+||
T Consensus 279 g~~~~~~i~i~~~is~~~~~~~~~~~~sR~~~amardg~lP~ 320 (473)
T TIGR00905 279 GKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPK 320 (473)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH
Confidence 444444333334444444445555565556677778999997
No 28
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=68.95 E-value=1.9e+02 Score=32.51 Aligned_cols=44 Identities=11% Similarity=-0.124 Sum_probs=29.3
Q ss_pred ccccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCccc
Q 006371 277 IPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRV 320 (648)
Q Consensus 277 ~P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr~ 320 (648)
..+|..+.+.+.+.++..-+..+.+.++=-+..++-+-|.+|+.
T Consensus 274 ~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 274 VGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 34555555555555666666666666666667777789999964
No 29
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=68.78 E-value=38 Score=37.74 Aligned_cols=107 Identities=15% Similarity=0.046 Sum_probs=49.9
Q ss_pred hhHHHHHHHHHHHhhcccccccc---chhhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhcC-chh-hhhh
Q 006371 140 ALSAIILIVLFLMQKFGTSRVSF---LFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKG-KEG-WLLL 214 (648)
Q Consensus 140 ~is~~Il~~LF~~Q~~GT~~ig~---~FgPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~~-~~~-~~~L 214 (648)
.+++++++.+..+.-+|.+..++ .+.=+.++=++.+.++|+..... +-+..-.|.. ....+ ..+ ...+
T Consensus 129 ~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~~~---~~~~~~~~~~----~~~~g~~~~~~~~~ 201 (445)
T PRK11357 129 FIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKA---ENFAAPTTTA----IGATGSFMALLAGI 201 (445)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---ccccCCCccc----ccccchHHHHHHHH
Confidence 45666677777889999764444 44433344344455556654322 1111111100 00011 111 1223
Q ss_pred cceeeeecchhhh--hhccCCCCccchhhhHHHHHHHHHHH
Q 006371 215 GGTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVL 253 (648)
Q Consensus 215 G~v~L~iTG~EAL--yADmGHfg~~~I~~sw~~~V~P~L~l 253 (648)
...+.+.+|-|+. +|+==+--+|.|-++-..-+.-+.++
T Consensus 202 ~~~~~af~G~e~~~~~a~E~k~P~r~iP~Ai~~~~~i~~~~ 242 (445)
T PRK11357 202 SATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVL 242 (445)
T ss_pred HHHHHHHhhHHHHHhhHHHhcCccccchHHHHHHHHHHHHH
Confidence 4456777777754 33333555666666554433333333
No 30
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=67.76 E-value=1.8e+02 Score=32.47 Aligned_cols=176 Identities=19% Similarity=0.166 Sum_probs=79.2
Q ss_pred hhHHHHHHHHHHHhhccccccccchhh---HHHHHHHHHHHHHHHHhhccCcce----eeecCHHHHHHHHhhcCchh-h
Q 006371 140 ALSAIILIVLFLMQKFGTSRVSFLFSP---IMGAWTFSTPLVGIYSIIHHYPGI----FKALSPHYTFHFFWRKGKEG-W 211 (648)
Q Consensus 140 ~is~~Il~~LF~~Q~~GT~~ig~~FgP---im~~WF~~l~~~G~~~i~~~~p~V----l~AlnP~ya~~f~~~~~~~~-~ 211 (648)
.+++++++++..+.-+|++..+++--. +.++-++.+.++|+..+...+|.. +.-+.+.-. +..++..+ +
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~ 204 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAIFGFAPGSEVSGFSNLTGKGG---FFPNGIGAVL 204 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCccccccCCCC---cCcccHHHHH
Confidence 466777777778899998887765433 223333333445555443222321 111111000 01122111 2
Q ss_pred hhhcceeeeecchhhh--hhccCCCCccchhhhHHHHHHHHHHHhhcchhhHhhc----C-CCccc-cccccc---c-cc
Q 006371 212 LLLGGTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIR----H-PNDHE-DGFYKF---I-PK 279 (648)
Q Consensus 212 ~~LG~v~L~iTG~EAL--yADmGHfg~~~I~~sw~~~V~P~L~lnY~GQgA~ll~----~-p~~~~-npFf~~---~-P~ 279 (648)
..+...+.+.+|-|+. +|+-=+--+|+|..+-.. +.....+.|+.=-..... + ++..+ .||-.. . .+
T Consensus 205 ~a~~~~~~af~G~e~~~~~a~E~k~P~r~iPrAi~~-~~~~~~~~y~l~~~~~~~~~p~~~~~~~~~~p~~~~~~~~g~~ 283 (452)
T TIGR01773 205 LAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNS-VIWRIIVFYLGSIFIVVALLPWNSPNLLEVGSYVAVLELLGIP 283 (452)
T ss_pred HHHHHHHHHhccHHHHhHHHHhhcChhhHHHHHHHH-HHHHHHHHHHHHHHHHeeEeCCCCcccccCCcHHHHHHHcCCh
Confidence 3444566777888864 233233445667777532 233334445542222221 1 12112 265322 1 12
Q ss_pred cchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCcc
Q 006371 280 SVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPR 319 (648)
Q Consensus 280 ~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr 319 (648)
+..+-+-+++.++.+-+..+.+.++=-+....-+-|.+|+
T Consensus 284 ~~~~ii~~~~~~~~~~~~~~~~~~~sR~~~a~ardg~lP~ 323 (452)
T TIGR01773 284 HAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPR 323 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 2222222222233333334444444445556668899995
No 31
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=65.07 E-value=54 Score=34.85 Aligned_cols=89 Identities=11% Similarity=0.110 Sum_probs=56.4
Q ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHH----HHHHHHHHhhccccC-C-----cc----h
Q 006371 356 GKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFT----MEGVYVSAVFTKIPE-G-----GW----I 421 (648)
Q Consensus 356 s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~----id~~f~~an~~K~~~-G-----gw----~ 421 (648)
+.+-=..||-+|-.|.++.++-+++.+..+.+.+.+.++++.++++. +|-..+++ ..|-.. + .+ +
T Consensus 11 er~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss-~~~~~~~~~~~~~~~~R~~l 89 (301)
T PF14362_consen 11 ERNKYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSS-IRKSDGSRKRLLQALPRLLL 89 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhc-cccccchHHHHHHHHHHHHH
Confidence 33444679999999999999999999999999887777766666554 45444443 222222 1 12 3
Q ss_pred HHHHHHHHHHhhhhhhHhHHHHHH
Q 006371 422 PFAISFFLAFIMFGWFNGRQKKIE 445 (648)
Q Consensus 422 pl~ia~~~~~im~~W~~G~~~~~~ 445 (648)
.+++|.++...+..+-...++..+
T Consensus 90 AvliaivIs~pl~l~iF~~eI~~~ 113 (301)
T PF14362_consen 90 AVLIAIVISEPLELKIFEKEIDQK 113 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555666666655543
No 32
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=61.77 E-value=1.5e+02 Score=33.48 Aligned_cols=177 Identities=15% Similarity=0.121 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHHhhccccccccc---hhhHHHHHHHHHHHHHHHHhhcc--Ccc-eeeecCHHHHH-HHHhhcCchh-hh
Q 006371 141 LSAIILIVLFLMQKFGTSRVSFL---FSPIMGAWTFSTPLVGIYSIIHH--YPG-IFKALSPHYTF-HFFWRKGKEG-WL 212 (648)
Q Consensus 141 is~~Il~~LF~~Q~~GT~~ig~~---FgPim~~WF~~l~~~G~~~i~~~--~p~-Vl~AlnP~ya~-~f~~~~~~~~-~~ 212 (648)
++.++++.+..+.-+|++..+++ +.=+-++-++.+-+.|+..+... +|+ ....+.+.+.- .++ .++..| +.
T Consensus 137 ~~~~~~~~~~~iN~~g~~~~~~i~~~~~~~kl~~l~~~ii~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~g~~~~~~ 215 (469)
T PRK11049 137 ASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVALIVVGLVMVAMHFQSPTGVEASFAHLWNDGGMF-PKGLSGFFA 215 (469)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcccccCCCCCCC-cccHHHHHH
Confidence 44556667777888888665543 22222223333344555433210 121 00011110000 000 111111 33
Q ss_pred hhcceeeeecchhhh--hhccCCCCccchhhhHHHHHHHHHHHhhcchhhHhhc--CCCcc---cccccccc----cccc
Q 006371 213 LLGGTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIR--HPNDH---EDGFYKFI----PKSV 281 (648)
Q Consensus 213 ~LG~v~L~iTG~EAL--yADmGHfg~~~I~~sw~~~V~P~L~lnY~GQgA~ll~--~p~~~---~npFf~~~----P~~~ 281 (648)
.+..++.+.+|-|+. .|.==+--+|+|.++-.. +.-...+-|.-....+.. .+++. ++||-... -++.
T Consensus 216 ~~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 294 (469)
T PRK11049 216 GFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAA 294 (469)
T ss_pred HHHHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhH
Confidence 445566777788864 333335566777777642 333334445444433321 22322 35653321 1222
Q ss_pred hHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCcc
Q 006371 282 YWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPR 319 (648)
Q Consensus 282 ~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr 319 (648)
...+.+++.++.+-+..+.+.+.=-+....-+-|.+|+
T Consensus 295 ~~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~ 332 (469)
T PRK11049 295 ASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPK 332 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 22233333334444444444454455556668899996
No 33
>TIGR00930 2a30 K-Cl cotransporter.
Probab=59.32 E-value=1.8e+02 Score=36.49 Aligned_cols=25 Identities=12% Similarity=0.182 Sum_probs=19.3
Q ss_pred eehhHHHHHHHHHHHhhcccccccc
Q 006371 138 VEALSAIILIVLFLMQKFGTSRVSF 162 (648)
Q Consensus 138 vv~is~~Il~~LF~~Q~~GT~~ig~ 162 (648)
+-.++++++++++.+--+|.+..++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4456778888888999999876665
No 34
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=56.36 E-value=2.9e+02 Score=31.64 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=26.6
Q ss_pred hhhhcceeeeecchhhh--hhccCCCCccchhhhHHHHHHHHHHHhhcch
Q 006371 211 WLLLGGTVLCITGSEAL--FADLGHFNRSSIQMAFLFTIYPSLVLTYAGQ 258 (648)
Q Consensus 211 ~~~LG~v~L~iTG~EAL--yADmGHfg~~~I~~sw~~~V~P~L~lnY~GQ 258 (648)
+..+-+++.+.+|-|+. +|+==+--+|++-+|-..-+.-+.++.++|-
T Consensus 197 ~~~~~~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~ 246 (507)
T TIGR00910 197 LVVFVAFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGG 246 (507)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHH
Confidence 33334456678898865 4554455566666665544444444444443
No 35
>KOG3788 consensus Predicted divalent cation transporter [Inorganic ion transport and metabolism]
Probab=53.74 E-value=1.5e+02 Score=33.49 Aligned_cols=126 Identities=18% Similarity=0.229 Sum_probs=70.5
Q ss_pred HHHHHhHhhhhhhhHHHHHHhcCCCccceEEecCCCCCCcccchhhHHHH-------------HHHh-heeeEEeC----
Q 006371 293 AIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYIL-------------MILC-VAVILIFG---- 354 (648)
Q Consensus 293 tiIASQA~Isg~FSl~~Qai~L~~~Pr~~i~hTS~~~~GQiYiP~vNw~L-------------~i~~-i~vv~~F~---- 354 (648)
+.+.-||.|-| |-..--|+.+|..| +|..|++..=.++ +... +.++.+=|
T Consensus 112 aLvqvQatvvg-fla~i~a~~lg~~p-----------~~~~~~~~~llL~~SSv~ta~las~vl~~lmv~vIi~srk~~i 179 (441)
T KOG3788|consen 112 ALVQVQATVVG-FLAAIAAIALGIIP-----------EGDFDIEHSLLLCASSVATATLASLVLGILMVVVIIGSRKYDI 179 (441)
T ss_pred HHHHHHHHHHH-HHHHHHHHHhccCc-----------cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccCC
Confidence 45666777766 66666678999999 6778877543221 1111 12222222
Q ss_pred CchhhhhhhhhHHHHHHHHHHHHHHHHH--HHHhccChHHHHHHHHHHHHHHH-----HHHHHhhccccCCcchHHHHHH
Q 006371 355 EGKDIGNAFGVVVSLVMLITTILLTLVM--IVIWRTPSLLVALYFLVFFTMEG-----VYVSAVFTKIPEGGWIPFAISF 427 (648)
Q Consensus 355 ~s~~l~~AYGiaV~~~M~iTT~L~~~v~--~~~w~~~~~~~~~~~~~f~~id~-----~f~~an~~K~~~Ggw~pl~ia~ 427 (648)
|-+|++.=-+ |--++|+--++|.++-- +...+.+.++..+...+|+++-- ++=..-..|+++-||+|+++|.
T Consensus 180 NPDNIatPia-ASlGDl~Tl~~L~~~~~~~~~~~~~~~~l~~~v~~~flal~pvwi~ia~~~~~t~~Vlk~gw~pvi~Am 258 (441)
T KOG3788|consen 180 NPDNIATPIA-ASLGDLLTLSSLAFFGSLFYNASDTSSYLTVLVVVFFLALLPVWIMIAAEDEGTRRVLKQGWEPVIIAM 258 (441)
T ss_pred Cchhhcchhh-hhhhhHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHHhHHHHhhhccCchhhhhHhcccHHHHHHH
Confidence 5566655432 23345554455544432 33334444555556666665322 2223446789999999999987
Q ss_pred HHHH
Q 006371 428 FLAF 431 (648)
Q Consensus 428 ~~~~ 431 (648)
.+-+
T Consensus 259 ~ISs 262 (441)
T KOG3788|consen 259 MISS 262 (441)
T ss_pred HHHc
Confidence 6643
No 36
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [], [], []. These proteins seem to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. This domain is found in a wide variety of permeases, as well as several hypothetical proteins. ; GO: 0006810 transport, 0055085 transmembrane transport, 0016020 membrane
Probab=51.46 E-value=17 Score=40.79 Aligned_cols=106 Identities=19% Similarity=0.159 Sum_probs=52.1
Q ss_pred hhHHHHHHHHHHHhhcccccccc---chhhHHHHHHHHHHHHH-HHHhhccCcceeeecCHHHHH-HHHhhc--------
Q 006371 140 ALSAIILIVLFLMQKFGTSRVSF---LFSPIMGAWTFSTPLVG-IYSIIHHYPGIFKALSPHYTF-HFFWRK-------- 206 (648)
Q Consensus 140 ~is~~Il~~LF~~Q~~GT~~ig~---~FgPim~~WF~~l~~~G-~~~i~~~~p~Vl~AlnP~ya~-~f~~~~-------- 206 (648)
+++.+.++.+..+.-+|.+..++ .+.-+.++=.+..-+.| +.-....+|.-.+-.+..... +++...
T Consensus 119 ~~~~i~~~~~~~l~~~gv~~~~~~~~~~~~i~~~~li~~ii~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (478)
T PF00324_consen 119 LIAIIFILLITLLNLFGVRVSGKIEFILTIIKLIALIAFIIVGVIILFFGGGPSNGRYWGDPGSFANNFPPGFTDPSGGG 198 (478)
T ss_pred hhhhhhhhhhhhhhhhhhhccchHHHHHHHHhhhHhhhhhhhcccccccccCCCcccccccccccccccccccccccccc
Confidence 44566666666777788766665 44444444333333444 222222233333111111110 111111
Q ss_pred Cchhhhhhcceeeeecchh--hhhhccCCCCccchhhhHHH
Q 006371 207 GKEGWLLLGGTVLCITGSE--ALFADLGHFNRSSIQMAFLF 245 (648)
Q Consensus 207 ~~~~~~~LG~v~L~iTG~E--ALyADmGHfg~~~I~~sw~~ 245 (648)
-..=+..+.-.+.+.+|-| +.+|+==+=-||+|.++-..
T Consensus 199 ~~~~~~~~~~~~~af~G~e~~a~~a~E~k~P~k~IPra~~~ 239 (478)
T PF00324_consen 199 FSGFFAALVFAFFAFVGFESIAILAEEAKNPRKTIPRATLL 239 (478)
T ss_pred hhHHHHhhhhhhcccccccccccccccCCCchhhhhhHhhh
Confidence 0112556667788888888 34555555667777666554
No 37
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=49.08 E-value=15 Score=37.88 Aligned_cols=30 Identities=23% Similarity=0.599 Sum_probs=26.1
Q ss_pred cCCcchHHHHHHHHHHhhhhhhHhHHHHHH
Q 006371 416 PEGGWIPFAISFFLAFIMFGWFNGRQKKIE 445 (648)
Q Consensus 416 ~~Ggw~pl~ia~~~~~im~~W~~G~~~~~~ 445 (648)
-+|||..++.++++..+..+|+|--+.+.+
T Consensus 259 i~~G~isiv~Gliiv~iLii~N~kvEv~AR 288 (304)
T COG4059 259 IQGGWISIVAGLIIVLILIIWNRKVEVKAR 288 (304)
T ss_pred cccchhhhHHHHHHHHHHHHhcchhhhhhh
Confidence 389999999999999999999987666644
No 38
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=38.66 E-value=23 Score=39.96 Aligned_cols=105 Identities=14% Similarity=0.214 Sum_probs=67.0
Q ss_pred hHhhhhhhhHHH-HHHhcCCCccceEEecCCCCCC----cccchhhHHHHHHHhheeeEEeCCchhhhhhhhhHHHHHHH
Q 006371 298 QSLISATFSVIK-QSVVLDYFPRVKVVHTSSNKEG----EVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVML 372 (648)
Q Consensus 298 QA~Isg~FSl~~-Qai~L~~~Pr~~i~hTS~~~~G----QiYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYGiaV~~~M~ 372 (648)
|=.|.+.+...+ +.-..|-.||+.+...=++..| |+|+|.+ ++..+.=|..-=|-++-.+=-.++||.+..
T Consensus 209 qFti~~~~~~s~~~~~sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~----LiVilSWVSFWin~~a~pARv~lGITTVLT 284 (459)
T KOG3643|consen 209 QFTITEYHVTSRLVSFSTGNYSRLSLSFQLRRNIGFYILQTYIPST----LIVILSWVSFWINRDASPARVALGITTVLT 284 (459)
T ss_pred ceEEEEEEEEEEEEEEccccceeEEEEEEEEeeccEEEEeeecchh----hhhHHhHhHhhhccccchhheeeceehHHh
Confidence 445555544422 1234799999999999888888 9999986 222333344445666667778999999999
Q ss_pred HHHHHHHHHHH-----HHhccChHHHHHHHHHHHH-HHHH
Q 006371 373 ITTILLTLVMI-----VIWRTPSLLVALYFLVFFT-MEGV 406 (648)
Q Consensus 373 iTT~L~~~v~~-----~~w~~~~~~~~~~~~~f~~-id~~ 406 (648)
|||++...=.. +++..-..+..+|+.+|++ +|-+
T Consensus 285 MTTl~t~~n~slPrvSYVKAiDiYL~vCFvfVF~sLLEYA 324 (459)
T KOG3643|consen 285 MTTLMTSTNESLPRVSYVKAIDVYLGVCFVFVFLSLLEYA 324 (459)
T ss_pred HHHHHhhhhccCCCccceeeehhhhhHHHHHHHHHHHHHH
Confidence 99998654221 1233333455666666655 4544
No 39
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=33.53 E-value=1.5e+02 Score=29.90 Aligned_cols=21 Identities=14% Similarity=0.189 Sum_probs=17.4
Q ss_pred CcchHHHHHHHHHHhhhhhhH
Q 006371 418 GGWIPFAISFFLAFIMFGWFN 438 (648)
Q Consensus 418 Ggw~pl~ia~~~~~im~~W~~ 438 (648)
.+|.-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999988866654
No 40
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=32.54 E-value=7.3e+02 Score=27.55 Aligned_cols=23 Identities=13% Similarity=0.382 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHhhccccccccc
Q 006371 141 LSAIILIVLFLMQKFGTSRVSFL 163 (648)
Q Consensus 141 is~~Il~~LF~~Q~~GT~~ig~~ 163 (648)
+++++++++..+.-+|++..+++
T Consensus 128 ~~~~~~~~~~~ln~~gvk~~~~i 150 (445)
T PRK10644 128 TCVVVLWIFVLLNIVGPKMITRV 150 (445)
T ss_pred HHHHHHHHHHHHHHhchHHHHHH
Confidence 45666667788899998777663
No 41
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=29.27 E-value=1.1e+02 Score=30.69 Aligned_cols=59 Identities=25% Similarity=0.341 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhcchhhHhhcCCCcccccccccccccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHH
Q 006371 244 LFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSV 312 (648)
Q Consensus 244 ~~~V~P~L~lnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai 312 (648)
+.+=+|||++.|+ .+.=+.||.+..| -.+-+--++.|+..-++-||+ +|-.|+.+..-+
T Consensus 91 ~llP~PsLVIaYC--l~mqi~~~~~~~~-------~gMsIvcv~~Si~ti~~~~~s-~s~~~~ti~yIi 149 (189)
T PF05313_consen 91 LLLPFPSLVIAYC--LSMQIYNPGANNN-------VGMSIVCVIMSIITIIVNSVS-GSSGAYTISYII 149 (189)
T ss_pred HHcCccHHHHHHH--HHheeecCCCcce-------ehhHHHHHHHHHHHHHHHhhh-HhHHHHHHHHHH
Confidence 3356799999998 2222558887776 456666777777777778888 666676665443
No 42
>PF11827 DUF3347: Protein of unknown function (DUF3347); InterPro: IPR021782 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 169 to 570 amino acids in length.
Probab=27.95 E-value=23 Score=35.05 Aligned_cols=21 Identities=10% Similarity=0.488 Sum_probs=18.9
Q ss_pred hcchhhHhhcCCCcccccccc
Q 006371 255 YAGQTAYLIRHPNDHEDGFYK 275 (648)
Q Consensus 255 Y~GQgA~ll~~p~~~~npFf~ 275 (648)
.=||||+=|++-+.+.||||.
T Consensus 143 ~~~kGa~WLs~~~~I~NPYfG 163 (174)
T PF11827_consen 143 FNNKGAYWLSDSKEIKNPYFG 163 (174)
T ss_pred cCCCCCeeCCCCCcCcCCCCc
Confidence 368999999999999999996
No 43
>PRK10519 hypothetical protein; Provisional
Probab=24.61 E-value=26 Score=34.12 Aligned_cols=55 Identities=15% Similarity=0.144 Sum_probs=41.1
Q ss_pred hhhhcccccCCCCCCCceeehhHHHHHHHHHHHhhcc-ccccccchhhHHHHHHHHHHHHHH
Q 006371 120 LSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFG-TSRVSFLFSPIMGAWTFSTPLVGI 180 (648)
Q Consensus 120 lSAveGl~~~~p~~~~~~vv~is~~Il~~LF~~Q~~G-T~~ig~~FgPim~~WF~~l~~~G~ 180 (648)
=+|-||+++.. +.++|.-+...+++-.+|+.| .+.+++.|+|+| -||-.=+-.+.
T Consensus 13 ~GakeG~~i~~-----~~iiP~li~~~v~I~iL~~sG~ld~l~~~l~Pvm-~llGLPgea~~ 68 (151)
T PRK10519 13 DGARKGFTIAT-----TNLLPNVLMAFVIIQALNITGLLDLVGHIFGPVM-ALFGLPGEAAT 68 (151)
T ss_pred HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH-HHhCCCHHHHH
Confidence 35778888752 138899999999999999999 677999999999 35543333333
No 44
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=24.36 E-value=70 Score=24.93 Aligned_cols=30 Identities=17% Similarity=0.321 Sum_probs=15.4
Q ss_pred HHHHHhhhhhhHhHHHHHHHHHhcCCChhH
Q 006371 427 FFLAFIMFGWFNGRQKKIEYELTHKIDLER 456 (648)
Q Consensus 427 ~~~~~im~~W~~G~~~~~~~~~~~~~~~~~ 456 (648)
.++|.....|-+-++.+.+++...+++++|
T Consensus 19 ~~~F~gi~~w~~~~~~k~~~e~aa~lpl~d 48 (49)
T PF05545_consen 19 FVFFIGIVIWAYRPRNKKRFEEAANLPLDD 48 (49)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHccCccC
Confidence 334444445555444455555555666553
No 45
>PRK10197 gamma-aminobutyrate transporter; Provisional
Probab=22.30 E-value=1.1e+03 Score=26.27 Aligned_cols=23 Identities=13% Similarity=0.050 Sum_probs=16.7
Q ss_pred hhHHHHHHHHHHHhhcccccccc
Q 006371 140 ALSAIILIVLFLMQKFGTSRVSF 162 (648)
Q Consensus 140 ~is~~Il~~LF~~Q~~GT~~ig~ 162 (648)
.++.++++.+..+.-+|.+..|+
T Consensus 108 ~~~~~~l~~~~~lN~~gv~~~~~ 130 (446)
T PRK10197 108 LFSLVITLALTGSNLLSVKNYGE 130 (446)
T ss_pred HHHHHHHHHHHHHHHHhhHHHhh
Confidence 45677777777888888877654
Done!