Query 006372
Match_columns 648
No_of_seqs 312 out of 1553
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 23:16:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006372.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006372hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fzv_A Putative methyltransfer 100.0 7.8E-46 2.7E-50 396.9 11.1 142 1-171 155-304 (359)
2 2frx_A Hypothetical protein YE 100.0 2.7E-42 9.3E-47 382.3 27.3 321 1-561 124-446 (479)
3 3m4x_A NOL1/NOP2/SUN family pr 100.0 3.7E-40 1.3E-44 363.0 23.7 308 1-536 112-419 (456)
4 2b9e_A NOL1/NOP2/SUN domain fa 100.0 2E-40 7E-45 348.4 19.3 152 1-179 109-262 (309)
5 1ixk_A Methyltransferase; open 100.0 2.2E-37 7.4E-42 325.1 19.9 191 1-297 125-315 (315)
6 3m6w_A RRNA methylase; rRNA me 100.0 1.5E-37 5.1E-42 342.9 17.6 195 1-299 108-302 (464)
7 2yxl_A PH0851 protein, 450AA l 100.0 6.6E-34 2.3E-38 312.3 17.8 151 1-179 266-416 (450)
8 3ajd_A Putative methyltransfer 100.0 8.8E-34 3E-38 291.2 14.8 161 1-196 90-250 (274)
9 1sqg_A SUN protein, FMU protei 100.0 3.2E-32 1.1E-36 296.9 16.3 146 1-176 253-398 (429)
10 3id6_C Fibrillarin-like rRNA/T 99.4 9.7E-13 3.3E-17 132.9 11.2 129 1-184 83-218 (232)
11 4dmg_A Putative uncharacterize 99.3 5.3E-12 1.8E-16 136.6 12.2 134 1-179 221-356 (393)
12 1wxx_A TT1595, hypothetical pr 99.2 4.3E-11 1.5E-15 128.3 13.1 139 1-180 216-356 (382)
13 2as0_A Hypothetical protein PH 99.1 3.1E-10 1.1E-14 122.0 11.8 138 1-178 224-364 (396)
14 3c0k_A UPF0064 protein YCCW; P 99.1 1.9E-10 6.4E-15 123.8 8.1 139 1-179 227-369 (396)
15 3v97_A Ribosomal RNA large sub 99.0 1.1E-09 3.6E-14 126.8 11.5 126 1-171 546-673 (703)
16 2dul_A N(2),N(2)-dimethylguano 99.0 2.8E-10 9.6E-15 122.6 6.3 115 1-171 54-183 (378)
17 3axs_A Probable N(2),N(2)-dime 99.0 4.7E-10 1.6E-14 121.5 6.9 116 1-171 59-177 (392)
18 2frn_A Hypothetical protein PH 98.8 1.5E-08 5.1E-13 103.9 12.8 120 1-178 132-255 (278)
19 2b78_A Hypothetical protein SM 98.8 6.3E-09 2.2E-13 111.9 9.8 133 1-173 219-355 (385)
20 3k6r_A Putative transferase PH 98.8 1.9E-08 6.5E-13 104.2 12.9 121 1-179 132-256 (278)
21 2igt_A SAM dependent methyltra 98.8 9.7E-09 3.3E-13 108.5 9.5 135 1-175 160-299 (332)
22 1i1n_A Protein-L-isoaspartate 98.8 8.6E-09 3E-13 100.9 7.9 106 1-163 84-194 (226)
23 2b3t_A Protein methyltransfera 98.8 6.5E-08 2.2E-12 98.3 14.3 135 1-171 116-254 (276)
24 3tma_A Methyltransferase; thum 98.8 3.9E-08 1.3E-12 103.9 12.5 119 1-168 210-328 (354)
25 3evz_A Methyltransferase; NYSG 98.7 1.9E-07 6.3E-12 91.4 14.2 142 1-178 62-204 (230)
26 3lpm_A Putative methyltransfer 98.7 1.3E-07 4.4E-12 95.3 12.7 135 1-171 56-192 (259)
27 3njr_A Precorrin-6Y methylase; 98.7 8.9E-08 3.1E-12 93.5 11.0 117 1-179 62-179 (204)
28 3e05_A Precorrin-6Y C5,15-meth 98.6 2.9E-07 9.9E-12 88.7 13.8 121 1-179 47-167 (204)
29 3dou_A Ribosomal RNA large sub 98.6 4.2E-08 1.4E-12 95.3 6.8 121 1-170 32-155 (191)
30 3eey_A Putative rRNA methylase 98.6 2.9E-07 9.9E-12 87.9 12.5 126 1-169 29-159 (197)
31 2qm3_A Predicted methyltransfe 98.6 2.9E-07 9.8E-12 98.3 13.7 116 1-171 179-300 (373)
32 3mti_A RRNA methylase; SAM-dep 98.6 3.2E-07 1.1E-11 86.7 12.1 125 1-170 29-156 (185)
33 1yb2_A Hypothetical protein TA 98.6 1.4E-07 4.7E-12 96.0 9.9 118 1-180 117-235 (275)
34 2yx1_A Hypothetical protein MJ 98.5 3.3E-07 1.1E-11 96.6 11.1 93 1-155 202-295 (336)
35 3tfw_A Putative O-methyltransf 98.5 3.2E-07 1.1E-11 92.1 10.2 104 1-155 70-174 (248)
36 1nv8_A HEMK protein; class I a 98.5 1.6E-07 5.3E-12 96.9 8.1 126 1-165 130-260 (284)
37 2f8l_A Hypothetical protein LM 98.5 5.2E-07 1.8E-11 94.9 11.8 139 1-170 137-276 (344)
38 3hm2_A Precorrin-6Y C5,15-meth 98.5 5.8E-07 2E-11 83.8 10.7 120 1-180 32-153 (178)
39 3u81_A Catechol O-methyltransf 98.5 4.5E-07 1.5E-11 88.8 10.4 127 1-178 65-193 (221)
40 3bt7_A TRNA (uracil-5-)-methyl 98.5 1.1E-07 3.6E-12 101.6 5.8 110 1-154 220-329 (369)
41 2gpy_A O-methyltransferase; st 98.5 3.8E-07 1.3E-11 89.8 9.0 102 1-154 61-163 (233)
42 1inl_A Spermidine synthase; be 98.4 1.4E-07 4.7E-12 97.9 5.8 129 1-176 97-231 (296)
43 3a27_A TYW2, uncharacterized p 98.4 5.4E-07 1.8E-11 92.1 9.7 97 1-155 126-222 (272)
44 3c3y_A Pfomt, O-methyltransfer 98.4 4.5E-07 1.5E-11 90.5 8.9 106 1-154 77-184 (237)
45 1o54_A SAM-dependent O-methylt 98.4 1.2E-06 4.1E-11 88.8 11.7 118 1-180 119-237 (277)
46 3duw_A OMT, O-methyltransferas 98.4 7.5E-07 2.6E-11 86.8 9.5 106 1-155 65-171 (223)
47 3gdh_A Trimethylguanosine synt 98.4 1.1E-06 3.6E-11 86.8 10.5 76 1-109 85-161 (241)
48 2pwy_A TRNA (adenine-N(1)-)-me 98.4 3.2E-06 1.1E-10 83.7 13.4 98 1-154 103-201 (258)
49 3mb5_A SAM-dependent methyltra 98.3 1E-06 3.5E-11 87.7 9.3 111 1-171 100-211 (255)
50 1wy7_A Hypothetical protein PH 98.3 1.7E-06 5.7E-11 83.2 10.5 116 1-176 56-171 (207)
51 4dzr_A Protein-(glutamine-N5) 98.3 2.8E-07 9.6E-12 88.0 4.5 138 1-168 37-178 (215)
52 2ift_A Putative methylase HI07 98.3 1.7E-06 6E-11 83.9 9.1 103 1-155 60-167 (201)
53 3dr5_A Putative O-methyltransf 98.3 1.9E-06 6.5E-11 85.4 9.2 102 1-154 63-166 (221)
54 1nt2_A Fibrillarin-like PRE-rR 98.3 3.3E-06 1.1E-10 83.0 10.6 124 1-181 64-194 (210)
55 3ntv_A MW1564 protein; rossman 98.3 3.8E-06 1.3E-10 83.1 11.0 99 1-153 78-178 (232)
56 4df3_A Fibrillarin-like rRNA/T 98.2 2.4E-06 8.3E-11 86.3 9.5 98 2-151 85-182 (233)
57 3p9n_A Possible methyltransfer 98.2 3.6E-06 1.2E-10 80.1 9.9 105 1-155 51-157 (189)
58 3grz_A L11 mtase, ribosomal pr 98.2 5.2E-06 1.8E-10 79.7 10.7 116 1-179 67-182 (205)
59 1yzh_A TRNA (guanine-N(7)-)-me 98.2 9E-06 3.1E-10 79.0 12.1 110 1-152 48-157 (214)
60 2plw_A Ribosomal RNA methyltra 98.2 5E-06 1.7E-10 79.3 10.1 136 1-169 29-169 (201)
61 2fpo_A Methylase YHHF; structu 98.2 3.8E-06 1.3E-10 81.6 9.3 103 1-156 61-165 (202)
62 2vdv_E TRNA (guanine-N(7)-)-me 98.2 1.1E-05 3.9E-10 80.3 12.4 131 1-176 56-194 (246)
63 2fca_A TRNA (guanine-N(7)-)-me 98.2 4.6E-06 1.6E-10 81.7 9.3 110 1-152 45-154 (213)
64 3c3p_A Methyltransferase; NP_9 98.2 2.6E-06 8.9E-11 82.5 7.4 99 1-154 63-163 (210)
65 1xdz_A Methyltransferase GIDB; 98.1 7.3E-06 2.5E-10 81.3 10.0 117 1-171 77-193 (240)
66 1l3i_A Precorrin-6Y methyltran 98.1 8.4E-06 2.9E-10 76.1 9.6 117 2-179 41-159 (192)
67 3dh0_A SAM dependent methyltra 98.1 3.4E-05 1.2E-09 74.4 14.0 126 1-179 44-178 (219)
68 2bm8_A Cephalosporin hydroxyla 98.1 3.1E-06 1.1E-10 84.6 6.8 126 1-178 88-215 (236)
69 1i9g_A Hypothetical protein RV 98.1 1.1E-05 3.6E-10 81.3 10.8 98 1-154 106-206 (280)
70 2ozv_A Hypothetical protein AT 98.1 1.2E-05 4E-10 81.4 10.6 123 1-150 43-169 (260)
71 3tr6_A O-methyltransferase; ce 98.1 3.3E-06 1.1E-10 82.2 5.7 106 1-154 71-177 (225)
72 3g89_A Ribosomal RNA small sub 98.1 1.1E-05 3.6E-10 81.6 9.4 118 1-172 87-204 (249)
73 3vc1_A Geranyl diphosphate 2-C 98.0 4E-05 1.4E-09 78.9 13.9 102 1-156 124-226 (312)
74 3r3h_A O-methyltransferase, SA 98.0 1.1E-06 3.8E-11 88.2 1.9 105 1-153 67-172 (242)
75 1dus_A MJ0882; hypothetical pr 98.0 2.9E-05 9.8E-10 72.6 11.5 120 1-177 59-180 (194)
76 1sui_A Caffeoyl-COA O-methyltr 98.0 7.5E-06 2.5E-10 82.4 7.6 104 1-152 86-191 (247)
77 3lbf_A Protein-L-isoaspartate 98.0 2E-05 6.9E-10 75.8 10.2 93 1-153 84-176 (210)
78 3dxy_A TRNA (guanine-N(7)-)-me 98.0 1.2E-05 4.3E-10 79.4 8.5 111 1-152 41-151 (218)
79 1o9g_A RRNA methyltransferase; 98.0 1.4E-05 4.7E-10 79.7 8.4 118 1-154 58-217 (250)
80 3tm4_A TRNA (guanine N2-)-meth 98.0 2.9E-05 9.9E-10 82.9 11.3 119 1-171 224-343 (373)
81 2nyu_A Putative ribosomal RNA 98.0 2E-05 7E-10 74.6 8.9 131 1-169 29-160 (196)
82 2pbf_A Protein-L-isoaspartate 98.0 1.2E-05 4E-10 78.5 7.3 102 1-151 87-193 (227)
83 2yxd_A Probable cobalt-precorr 97.9 4.3E-05 1.5E-09 70.8 10.7 115 1-179 42-156 (183)
84 1ej0_A FTSJ; methyltransferase 97.9 1.4E-05 4.9E-10 73.0 7.2 123 1-169 29-151 (180)
85 2esr_A Methyltransferase; stru 97.9 2E-05 6.9E-10 73.7 8.0 102 1-155 38-142 (177)
86 2b25_A Hypothetical protein; s 97.9 4.5E-05 1.5E-09 79.6 11.2 97 1-151 112-219 (336)
87 2fhp_A Methylase, putative; al 97.9 2.4E-05 8.1E-10 73.3 8.0 108 1-156 51-159 (187)
88 1dl5_A Protein-L-isoaspartate 97.9 3.7E-05 1.3E-09 79.8 10.2 96 1-153 82-177 (317)
89 3f4k_A Putative methyltransfer 97.9 7.5E-05 2.6E-09 73.8 11.7 102 1-156 53-155 (257)
90 1g8a_A Fibrillarin-like PRE-rR 97.8 2.5E-05 8.7E-10 76.2 7.4 100 1-152 80-179 (227)
91 2p41_A Type II methyltransfera 97.8 5.9E-06 2E-10 86.2 2.9 115 1-170 89-210 (305)
92 3fpf_A Mtnas, putative unchara 97.8 7.2E-05 2.5E-09 78.1 10.7 92 2-150 130-221 (298)
93 2avd_A Catechol-O-methyltransf 97.8 3E-05 1E-09 75.6 7.2 104 1-153 76-181 (229)
94 3kkz_A Uncharacterized protein 97.8 8.2E-05 2.8E-09 74.4 10.5 103 1-157 53-156 (267)
95 2h1r_A Dimethyladenosine trans 97.8 1.4E-05 4.9E-10 82.8 5.0 112 1-154 49-162 (299)
96 2ipx_A RRNA 2'-O-methyltransfe 97.8 6.4E-05 2.2E-09 73.9 9.4 99 1-151 84-182 (233)
97 1uwv_A 23S rRNA (uracil-5-)-me 97.8 0.0001 3.4E-09 80.3 11.7 77 1-105 293-369 (433)
98 2okc_A Type I restriction enzy 97.8 8.9E-05 3E-09 80.9 11.1 139 1-169 178-328 (445)
99 2h00_A Methyltransferase 10 do 97.8 0.00029 9.8E-09 70.0 13.8 147 1-178 72-237 (254)
100 3cbg_A O-methyltransferase; cy 97.8 4.7E-05 1.6E-09 75.3 8.1 105 2-155 80-186 (232)
101 3kr9_A SAM-dependent methyltra 97.7 0.00035 1.2E-08 70.0 14.3 116 1-178 22-139 (225)
102 1r18_A Protein-L-isoaspartate( 97.7 7.5E-05 2.6E-09 73.1 8.9 101 1-153 91-196 (227)
103 3dmg_A Probable ribosomal RNA 97.7 6.9E-05 2.4E-09 80.6 9.2 107 1-157 240-346 (381)
104 1jsx_A Glucose-inhibited divis 97.7 0.00014 4.6E-09 69.6 10.0 96 1-153 72-167 (207)
105 1ws6_A Methyltransferase; stru 97.7 7.1E-05 2.4E-09 68.8 7.5 107 1-158 48-154 (171)
106 3jwh_A HEN1; methyltransferase 97.7 0.0003 1E-08 67.9 12.3 132 1-182 36-194 (217)
107 2yvl_A TRMI protein, hypotheti 97.7 0.00027 9.4E-09 69.3 11.8 94 2-154 99-193 (248)
108 2ih2_A Modification methylase 97.7 4.3E-05 1.5E-09 81.5 6.4 138 1-179 46-192 (421)
109 3dtn_A Putative methyltransfer 97.6 0.00028 9.5E-09 68.7 11.5 103 1-156 51-153 (234)
110 1nkv_A Hypothetical protein YJ 97.6 0.00035 1.2E-08 68.8 12.3 99 2-154 44-143 (256)
111 4dcm_A Ribosomal RNA large sub 97.6 0.00019 6.6E-09 76.8 11.1 109 1-157 229-340 (375)
112 2nxc_A L11 mtase, ribosomal pr 97.6 0.00023 7.9E-09 71.6 11.0 114 2-179 128-241 (254)
113 3dlc_A Putative S-adenosyl-L-m 97.6 0.00052 1.8E-08 65.3 12.9 103 1-156 50-153 (219)
114 2yxe_A Protein-L-isoaspartate 97.6 0.00023 7.7E-09 68.6 10.2 95 2-153 85-179 (215)
115 3jwg_A HEN1, methyltransferase 97.6 0.00039 1.3E-08 67.1 11.8 134 1-184 36-196 (219)
116 1xxl_A YCGJ protein; structura 97.6 0.00055 1.9E-08 67.4 12.9 99 2-154 29-127 (239)
117 2jjq_A Uncharacterized RNA met 97.6 0.0002 7E-09 78.0 10.6 70 1-105 297-366 (425)
118 1fbn_A MJ fibrillarin homologu 97.6 0.00031 1.1E-08 69.0 10.8 97 1-150 81-177 (230)
119 2kw5_A SLR1183 protein; struct 97.6 0.00084 2.9E-08 63.8 13.4 99 1-154 36-134 (202)
120 2hnk_A SAM-dependent O-methylt 97.6 0.00014 4.9E-09 71.7 8.3 114 2-155 68-185 (239)
121 3ckk_A TRNA (guanine-N(7)-)-me 97.6 0.00011 3.8E-09 73.4 7.5 111 1-153 53-170 (235)
122 3sm3_A SAM-dependent methyltra 97.5 0.00068 2.3E-08 65.4 12.4 104 1-155 37-145 (235)
123 3lec_A NADB-rossmann superfami 97.5 0.0012 4E-08 66.6 14.2 117 1-178 28-145 (230)
124 3lcc_A Putative methyl chlorid 97.5 0.00049 1.7E-08 67.2 10.6 123 2-179 74-204 (235)
125 1vbf_A 231AA long hypothetical 97.5 0.00029 1E-08 68.6 8.8 92 1-154 77-168 (231)
126 2ar0_A M.ecoki, type I restric 97.5 0.00016 5.4E-09 81.2 7.8 141 1-169 176-332 (541)
127 1mjf_A Spermidine synthase; sp 97.5 0.00011 3.7E-09 75.4 5.8 103 2-154 83-196 (281)
128 3adn_A Spermidine synthase; am 97.4 0.00024 8.4E-09 73.6 8.3 106 1-153 90-200 (294)
129 1ne2_A Hypothetical protein TA 97.4 0.00029 9.8E-09 67.3 8.2 111 1-178 58-168 (200)
130 1zq9_A Probable dimethyladenos 97.4 7E-05 2.4E-09 77.0 4.1 114 1-154 35-149 (285)
131 1zx0_A Guanidinoacetate N-meth 97.4 0.00014 4.6E-09 71.7 6.0 106 1-153 67-172 (236)
132 2xvm_A Tellurite resistance pr 97.4 0.00078 2.7E-08 63.3 10.9 97 2-151 40-136 (199)
133 2pjd_A Ribosomal RNA small sub 97.4 0.00062 2.1E-08 71.4 11.2 107 1-157 203-309 (343)
134 3mgg_A Methyltransferase; NYSG 97.4 0.00072 2.5E-08 67.6 11.1 99 1-151 44-142 (276)
135 3bus_A REBM, methyltransferase 97.4 0.0015 5.2E-08 65.0 13.4 100 2-154 69-169 (273)
136 3ofk_A Nodulation protein S; N 97.4 0.0006 2E-08 65.5 10.0 123 1-177 58-186 (216)
137 3ocj_A Putative exported prote 97.4 0.00049 1.7E-08 70.5 9.8 104 1-153 125-229 (305)
138 3ujc_A Phosphoethanolamine N-m 97.4 0.00072 2.5E-08 66.6 10.6 102 1-155 62-163 (266)
139 1ve3_A Hypothetical protein PH 97.4 0.00062 2.1E-08 65.6 9.9 101 1-154 45-145 (227)
140 3hem_A Cyclopropane-fatty-acyl 97.4 0.0013 4.4E-08 67.0 12.7 109 1-156 79-188 (302)
141 1jg1_A PIMT;, protein-L-isoasp 97.4 0.00049 1.7E-08 67.7 9.2 93 2-153 99-191 (235)
142 2ex4_A Adrenal gland protein A 97.3 0.0009 3.1E-08 65.7 10.8 119 2-171 87-216 (241)
143 3g5l_A Putative S-adenosylmeth 97.3 0.0016 5.3E-08 64.3 12.5 96 2-153 52-147 (253)
144 2o57_A Putative sarcosine dime 97.3 0.0023 7.8E-08 64.7 13.9 100 2-154 90-190 (297)
145 3h2b_A SAM-dependent methyltra 97.3 0.0014 4.7E-08 62.3 11.4 120 1-179 48-179 (203)
146 1kpg_A CFA synthase;, cyclopro 97.3 0.0016 5.3E-08 65.6 12.3 100 2-155 72-172 (287)
147 1ri5_A MRNA capping enzyme; me 97.3 0.00091 3.1E-08 67.1 10.4 106 1-154 71-177 (298)
148 2qfm_A Spermine synthase; sper 97.3 0.00037 1.3E-08 74.6 7.8 136 2-176 196-339 (364)
149 3orh_A Guanidinoacetate N-meth 97.3 0.00025 8.4E-09 70.5 6.0 103 2-151 68-170 (236)
150 3gnl_A Uncharacterized protein 97.3 0.0025 8.4E-08 64.7 13.4 116 1-177 28-144 (244)
151 2xyq_A Putative 2'-O-methyl tr 97.3 0.00015 5.2E-09 75.3 4.6 108 4-170 79-187 (290)
152 1m6y_A S-adenosyl-methyltransf 97.3 0.00021 7.3E-09 74.5 5.5 78 1-104 33-110 (301)
153 4htf_A S-adenosylmethionine-de 97.3 0.00074 2.5E-08 68.1 9.3 100 2-154 76-176 (285)
154 2pxx_A Uncharacterized protein 97.3 0.00039 1.3E-08 66.1 6.9 113 2-154 50-162 (215)
155 3mq2_A 16S rRNA methyltransfer 97.3 0.0011 3.9E-08 63.9 10.1 103 1-151 34-140 (218)
156 3m70_A Tellurite resistance pr 97.2 0.00083 2.8E-08 67.7 9.5 96 1-150 127-222 (286)
157 3g2m_A PCZA361.24; SAM-depende 97.2 0.00054 1.8E-08 69.8 8.0 103 1-155 89-194 (299)
158 2o07_A Spermidine synthase; st 97.2 0.00035 1.2E-08 72.7 6.6 106 2-154 103-212 (304)
159 1xtp_A LMAJ004091AAA; SGPP, st 97.2 0.0013 4.4E-08 64.5 10.3 117 2-171 101-229 (254)
160 2i7c_A Spermidine synthase; tr 97.2 0.00029 9.9E-09 72.3 5.8 106 2-154 86-195 (283)
161 4fsd_A Arsenic methyltransfera 97.2 0.0033 1.1E-07 66.9 13.9 109 1-154 90-206 (383)
162 1vl5_A Unknown conserved prote 97.2 0.0011 3.6E-08 65.9 9.4 98 2-153 45-142 (260)
163 4gek_A TRNA (CMO5U34)-methyltr 97.2 0.00098 3.3E-08 67.7 9.2 103 1-154 77-181 (261)
164 2pt6_A Spermidine synthase; tr 97.2 0.00019 6.6E-09 75.2 4.0 106 1-153 123-232 (321)
165 3lkd_A Type I restriction-modi 97.1 0.0025 8.4E-08 71.7 12.7 151 1-179 228-388 (542)
166 3l8d_A Methyltransferase; stru 97.1 0.0022 7.6E-08 62.3 10.9 98 1-155 60-157 (242)
167 1iy9_A Spermidine synthase; ro 97.1 0.00082 2.8E-08 68.7 8.0 105 2-153 83-191 (275)
168 3e23_A Uncharacterized protein 97.1 0.003 1E-07 60.4 11.2 112 1-171 50-172 (211)
169 3cvo_A Methyltransferase-like 97.1 0.0013 4.3E-08 65.1 8.5 121 5-168 39-169 (202)
170 3cgg_A SAM-dependent methyltra 97.1 0.0027 9.2E-08 59.0 10.2 118 2-178 54-171 (195)
171 3hnr_A Probable methyltransfer 97.1 0.0024 8.1E-08 61.4 10.1 101 1-158 52-152 (220)
172 2y1w_A Histone-arginine methyl 97.0 0.002 6.7E-08 67.9 10.3 114 2-168 58-174 (348)
173 2fk8_A Methoxy mycolic acid sy 97.0 0.0035 1.2E-07 64.2 11.6 101 2-156 98-199 (318)
174 1wzn_A SAM-dependent methyltra 97.0 0.0024 8E-08 62.8 9.8 98 1-151 48-145 (252)
175 2p8j_A S-adenosylmethionine-de 97.0 0.0022 7.4E-08 61.0 9.2 101 2-154 31-131 (209)
176 3gjy_A Spermidine synthase; AP 97.0 0.0018 6.3E-08 68.0 9.4 130 2-178 97-227 (317)
177 2p35_A Trans-aconitate 2-methy 97.0 0.0031 1.1E-07 62.0 10.5 96 1-154 40-135 (259)
178 1xj5_A Spermidine synthase 1; 97.0 0.0008 2.7E-08 71.0 6.2 107 2-154 128-238 (334)
179 3g5t_A Trans-aconitate 3-methy 96.9 0.0024 8.2E-08 65.0 9.5 108 1-154 43-152 (299)
180 2b2c_A Spermidine synthase; be 96.9 0.00088 3E-08 70.1 6.4 106 2-154 116-225 (314)
181 3q87_B N6 adenine specific DNA 96.9 0.0012 4.2E-08 62.0 6.7 111 1-171 30-140 (170)
182 1uir_A Polyamine aminopropyltr 96.9 0.0013 4.3E-08 68.6 7.2 109 2-154 85-198 (314)
183 3ou2_A SAM-dependent methyltra 96.9 0.0032 1.1E-07 60.0 9.2 97 1-154 53-149 (218)
184 3q7e_A Protein arginine N-meth 96.9 0.0017 5.7E-08 68.5 7.8 103 1-154 73-176 (349)
185 3bwc_A Spermidine synthase; SA 96.8 0.00098 3.3E-08 69.1 5.7 123 2-170 103-230 (304)
186 3p2e_A 16S rRNA methylase; met 96.8 0.0011 3.8E-08 65.6 5.7 105 1-151 31-139 (225)
187 3ll7_A Putative methyltransfer 96.8 0.0012 4.1E-08 71.8 6.2 74 1-104 100-175 (410)
188 3gu3_A Methyltransferase; alph 96.8 0.0025 8.6E-08 64.5 8.2 100 1-153 29-128 (284)
189 2yqz_A Hypothetical protein TT 96.8 0.0023 7.8E-08 63.0 7.7 94 2-150 47-140 (263)
190 1g6q_1 HnRNP arginine N-methyl 96.8 0.0021 7.3E-08 67.1 7.8 116 2-168 46-164 (328)
191 2qy6_A UPF0209 protein YFCK; s 96.7 0.0056 1.9E-07 62.3 10.3 127 1-171 67-226 (257)
192 3d2l_A SAM-dependent methyltra 96.7 0.0041 1.4E-07 60.4 8.9 100 2-154 41-140 (243)
193 3m33_A Uncharacterized protein 96.7 0.00091 3.1E-08 65.4 4.2 102 1-171 55-158 (226)
194 2fyt_A Protein arginine N-meth 96.7 0.0024 8.2E-08 67.1 7.6 110 2-162 72-184 (340)
195 2oxt_A Nucleoside-2'-O-methylt 96.7 0.00051 1.7E-08 70.2 2.3 117 1-176 81-209 (265)
196 3e8s_A Putative SAM dependent 96.7 0.0051 1.8E-07 58.7 9.1 94 2-152 60-153 (227)
197 3bxo_A N,N-dimethyltransferase 96.7 0.0046 1.6E-07 59.9 8.6 98 1-154 47-144 (239)
198 3thr_A Glycine N-methyltransfe 96.6 0.0023 8E-08 64.4 6.6 111 1-154 64-178 (293)
199 2wa2_A Non-structural protein 96.6 0.00075 2.6E-08 69.4 2.6 97 1-153 89-195 (276)
200 1y8c_A S-adenosylmethionine-de 96.6 0.0043 1.5E-07 60.1 7.9 100 2-153 45-144 (246)
201 3r0q_C Probable protein argini 96.6 0.0029 9.9E-08 67.4 7.2 110 1-162 70-182 (376)
202 3i9f_A Putative type 11 methyl 96.6 0.0092 3.1E-07 54.9 9.7 113 2-180 25-146 (170)
203 3g07_A 7SK snRNA methylphospha 96.6 0.0038 1.3E-07 63.8 7.7 41 2-51 54-94 (292)
204 1qzz_A RDMB, aclacinomycin-10- 96.5 0.022 7.5E-07 59.6 13.5 98 2-152 190-288 (374)
205 3bkw_A MLL3908 protein, S-aden 96.5 0.0036 1.2E-07 60.8 7.0 96 1-152 50-145 (243)
206 3b3j_A Histone-arginine methyl 96.5 0.0032 1.1E-07 69.6 7.4 111 1-164 165-278 (480)
207 2r3s_A Uncharacterized protein 96.5 0.017 5.7E-07 59.4 12.4 102 2-155 173-275 (335)
208 3khk_A Type I restriction-modi 96.5 0.012 4.2E-07 66.1 11.9 151 1-171 251-418 (544)
209 1pjz_A Thiopurine S-methyltran 96.5 0.0061 2.1E-07 58.8 7.9 104 1-155 29-144 (203)
210 3bzb_A Uncharacterized protein 96.3 0.018 6.3E-07 58.5 11.1 107 1-155 86-209 (281)
211 3bgv_A MRNA CAP guanine-N7 met 96.3 0.017 6E-07 59.0 10.6 111 1-154 41-158 (313)
212 2cmg_A Spermidine synthase; tr 96.3 0.0059 2E-07 62.1 6.8 76 28-154 95-174 (262)
213 1tw3_A COMT, carminomycin 4-O- 96.2 0.049 1.7E-06 56.7 14.0 100 1-153 190-290 (360)
214 3bkx_A SAM-dependent methyltra 96.1 0.018 6.3E-07 57.1 9.6 106 2-155 51-163 (275)
215 1x19_A CRTF-related protein; m 96.1 0.046 1.6E-06 57.1 13.0 100 2-154 198-298 (359)
216 1u2z_A Histone-lysine N-methyl 96.1 0.016 5.4E-07 63.5 9.6 101 1-150 249-358 (433)
217 3dp7_A SAM-dependent methyltra 96.1 0.064 2.2E-06 56.4 14.0 105 2-156 187-292 (363)
218 3i53_A O-methyltransferase; CO 96.0 0.1 3.5E-06 53.8 15.1 101 2-155 177-278 (332)
219 2ip2_A Probable phenazine-spec 96.0 0.047 1.6E-06 56.2 12.4 100 2-154 175-275 (334)
220 3dli_A Methyltransferase; PSI- 96.0 0.03 1E-06 54.7 10.5 118 2-179 49-181 (240)
221 2gs9_A Hypothetical protein TT 96.0 0.013 4.6E-07 55.7 7.6 78 29-154 58-135 (211)
222 2p7i_A Hypothetical protein; p 96.0 0.021 7.3E-07 55.0 9.0 93 2-153 50-143 (250)
223 2vdw_A Vaccinia virus capping 96.0 0.029 9.9E-07 58.0 10.5 111 1-153 55-171 (302)
224 3pfg_A N-methyltransferase; N, 96.0 0.0092 3.2E-07 59.1 6.5 95 2-152 58-152 (263)
225 3ccf_A Cyclopropane-fatty-acyl 95.9 0.015 5.3E-07 58.2 7.7 94 1-154 64-157 (279)
226 2i62_A Nicotinamide N-methyltr 95.8 0.017 5.7E-07 56.8 7.7 90 28-152 80-199 (265)
227 3iv6_A Putative Zn-dependent a 95.8 0.026 8.8E-07 57.6 9.3 111 1-165 52-162 (261)
228 3ldg_A Putative uncharacterize 95.7 0.068 2.3E-06 57.4 12.5 87 28-152 257-344 (384)
229 2avn_A Ubiquinone/menaquinone 95.7 0.024 8.4E-07 56.2 8.3 94 2-154 62-155 (260)
230 1p91_A Ribosomal RNA large sub 95.6 0.0084 2.9E-07 59.6 4.5 89 2-154 93-181 (269)
231 3sso_A Methyltransferase; macr 95.6 0.012 4.1E-07 64.0 5.9 94 5-153 233-326 (419)
232 3uwp_A Histone-lysine N-methyl 95.5 0.033 1.1E-06 60.8 9.1 100 1-151 180-288 (438)
233 3s1s_A Restriction endonucleas 95.5 0.011 3.9E-07 69.0 5.7 154 1-180 328-497 (878)
234 2gb4_A Thiopurine S-methyltran 95.4 0.034 1.2E-06 55.9 8.4 102 2-154 76-194 (252)
235 3k0b_A Predicted N6-adenine-sp 95.4 0.081 2.8E-06 56.9 11.8 87 28-152 264-351 (393)
236 3mcz_A O-methyltransferase; ad 95.4 0.069 2.3E-06 55.4 10.9 105 2-156 187-292 (352)
237 3ggd_A SAM-dependent methyltra 95.3 0.056 1.9E-06 52.7 9.4 116 1-169 63-178 (245)
238 2oyr_A UPF0341 protein YHIQ; a 95.3 0.016 5.4E-07 59.1 5.6 113 1-175 95-216 (258)
239 3gwz_A MMCR; methyltransferase 95.3 0.3 1E-05 51.4 15.6 102 2-156 210-312 (369)
240 3ldu_A Putative methylase; str 95.2 0.14 4.9E-06 54.7 12.7 78 1-101 202-310 (385)
241 2a14_A Indolethylamine N-methy 95.1 0.066 2.2E-06 53.5 9.3 22 131-152 177-198 (263)
242 3fzg_A 16S rRNA methylase; met 94.9 0.027 9.2E-07 55.5 5.5 97 3-154 58-156 (200)
243 2aot_A HMT, histamine N-methyl 94.9 0.082 2.8E-06 53.5 9.3 110 2-153 60-174 (292)
244 3hp7_A Hemolysin, putative; st 94.8 0.009 3.1E-07 62.1 2.0 91 2-150 93-184 (291)
245 3htx_A HEN1; HEN1, small RNA m 94.8 0.091 3.1E-06 61.8 10.4 103 2-154 729-837 (950)
246 3ege_A Putative methyltransfer 94.7 0.033 1.1E-06 55.4 5.7 91 2-153 42-132 (261)
247 2g72_A Phenylethanolamine N-me 94.7 0.078 2.7E-06 53.4 8.4 48 130-179 194-253 (289)
248 4hg2_A Methyltransferase type 94.6 0.019 6.5E-07 58.1 3.7 95 2-157 47-141 (257)
249 2zfu_A Nucleomethylin, cerebra 94.6 0.063 2.2E-06 51.3 7.2 45 131-178 131-175 (215)
250 2r6z_A UPF0341 protein in RSP 94.5 0.014 4.9E-07 59.1 2.6 73 1-101 90-170 (258)
251 1vlm_A SAM-dependent methyltra 94.5 0.13 4.4E-06 49.5 9.2 74 31-154 69-142 (219)
252 3ufb_A Type I restriction-modi 94.3 0.2 6.8E-06 56.0 11.6 145 2-169 225-382 (530)
253 3cc8_A Putative methyltransfer 94.2 0.063 2.1E-06 51.1 6.2 93 2-153 40-132 (230)
254 3eld_A Methyltransferase; flav 94.1 0.022 7.4E-07 59.4 2.8 69 91-176 146-215 (300)
255 2wk1_A NOVP; transferase, O-me 94.0 0.26 9.1E-06 50.8 10.9 127 4-179 116-271 (282)
256 3v97_A Ribosomal RNA large sub 93.9 0.41 1.4E-05 55.3 13.4 91 28-152 257-348 (703)
257 4hc4_A Protein arginine N-meth 93.7 0.13 4.4E-06 55.2 8.2 94 27-162 106-202 (376)
258 1af7_A Chemotaxis receptor met 93.7 0.2 6.9E-06 51.3 9.2 23 128-150 229-251 (274)
259 3gru_A Dimethyladenosine trans 93.1 0.18 6.3E-06 52.2 7.8 66 2-101 58-123 (295)
260 3evf_A RNA-directed RNA polyme 93.0 0.15 5.2E-06 52.5 6.9 70 91-177 139-209 (277)
261 4auk_A Ribosomal RNA large sub 92.9 0.09 3.1E-06 56.4 5.2 64 1-103 218-281 (375)
262 3opn_A Putative hemolysin; str 92.9 0.031 1.1E-06 55.6 1.5 93 1-151 44-137 (232)
263 3c6k_A Spermine synthase; sper 92.7 0.17 5.9E-06 54.4 7.1 130 27-186 228-366 (381)
264 3o4f_A Spermidine synthase; am 92.4 0.28 9.5E-06 51.0 8.1 86 27-150 107-197 (294)
265 1wg8_A Predicted S-adenosylmet 92.3 0.068 2.3E-06 55.4 3.2 72 2-104 30-101 (285)
266 1g55_A DNA cytosine methyltran 92.2 0.38 1.3E-05 50.6 8.9 143 1-185 8-157 (343)
267 2qe6_A Uncharacterized protein 92.2 1.1 3.7E-05 45.3 12.0 97 26-154 103-199 (274)
268 3tka_A Ribosomal RNA small sub 91.7 0.08 2.7E-06 56.2 3.0 78 1-105 64-141 (347)
269 1yub_A Ermam, rRNA methyltrans 91.2 0.017 5.9E-07 57.3 -2.6 71 1-105 36-106 (245)
270 3gcz_A Polyprotein; flavivirus 90.7 0.061 2.1E-06 55.6 0.9 69 91-177 155-226 (282)
271 3vyw_A MNMC2; tRNA wobble urid 90.6 0.36 1.2E-05 50.5 6.6 59 91-175 185-243 (308)
272 3lst_A CALO1 methyltransferase 90.4 1.1 3.8E-05 46.4 10.2 97 2-154 192-289 (348)
273 3g7u_A Cytosine-specific methy 89.8 4.6 0.00016 43.0 14.6 83 1-111 8-90 (376)
274 2oo3_A Protein involved in cat 89.3 0.057 2E-06 55.9 -0.7 55 28-101 114-168 (283)
275 4a6d_A Hydroxyindole O-methylt 88.6 1.9 6.5E-05 45.1 10.4 101 3-156 188-288 (353)
276 2c7p_A Modification methylase 86.9 1.1 3.6E-05 47.0 7.2 74 1-111 17-90 (327)
277 2px2_A Genome polyprotein [con 86.8 0.15 5.1E-06 52.2 0.5 29 1-34 80-108 (269)
278 3tqs_A Ribosomal RNA small sub 86.1 0.73 2.5E-05 46.5 5.2 52 2-66 37-88 (255)
279 3lcv_B Sisomicin-gentamicin re 85.2 2.3 8E-05 43.7 8.4 79 26-148 155-233 (281)
280 3giw_A Protein of unknown func 84.0 1.2 4.2E-05 45.7 5.8 107 6-154 92-203 (277)
281 3r24_A NSP16, 2'-O-methyl tran 83.8 1.2 4.3E-05 46.4 5.7 49 91-150 168-216 (344)
282 1qam_A ERMC' methyltransferase 83.5 1.9 6.5E-05 42.7 6.8 52 2-66 38-89 (244)
283 1sqw_A Saccharomyces cerevisia 83.4 0.77 2.6E-05 44.7 3.8 121 419-562 11-136 (188)
284 4e2x_A TCAB9; kijanose, tetron 82.9 0.44 1.5E-05 50.5 2.1 94 2-153 115-210 (416)
285 3fut_A Dimethyladenosine trans 81.7 1.6 5.4E-05 44.5 5.5 66 2-101 54-119 (271)
286 1fp1_D Isoliquiritigenin 2'-O- 80.9 2.2 7.4E-05 44.7 6.4 93 2-154 217-309 (372)
287 3frh_A 16S rRNA methylase; met 80.4 4.6 0.00016 41.0 8.3 78 27-148 126-203 (253)
288 2p38_A Protein involved in rib 79.6 6.4 0.00022 37.4 8.6 135 419-591 17-157 (166)
289 3reo_A (ISO)eugenol O-methyltr 78.6 3.9 0.00013 42.9 7.5 94 2-155 211-304 (368)
290 3p9c_A Caffeic acid O-methyltr 77.2 4.4 0.00015 42.4 7.5 94 2-155 209-302 (364)
291 1fp2_A Isoflavone O-methyltran 74.8 5.3 0.00018 41.3 7.2 94 2-155 196-292 (352)
292 2qrv_A DNA (cytosine-5)-methyl 74.2 2.9 9.9E-05 43.1 4.9 78 1-109 22-100 (295)
293 4h0n_A DNMT2; SAH binding, tra 73.0 2.6 8.7E-05 44.2 4.2 78 1-109 9-86 (333)
294 1boo_A Protein (N-4 cytosine-s 72.3 4 0.00014 42.3 5.5 55 91-153 32-86 (323)
295 1g60_A Adenine-specific methyl 69.7 4.9 0.00017 40.0 5.3 56 91-154 22-77 (260)
296 1zg3_A Isoflavanone 4'-O-methy 69.3 8.3 0.00028 39.9 7.1 93 2-154 201-296 (358)
297 3ftd_A Dimethyladenosine trans 65.8 4.8 0.00017 40.1 4.3 51 2-66 39-89 (249)
298 3ps9_A TRNA 5-methylaminomethy 64.9 6.9 0.00024 44.3 5.9 59 91-175 178-236 (676)
299 3ubt_Y Modification methylase 63.3 8.2 0.00028 39.4 5.6 74 1-110 6-79 (331)
300 4gqb_A Protein arginine N-meth 63.0 14 0.00048 42.2 7.8 97 28-167 386-485 (637)
301 3ua3_A Protein arginine N-meth 62.9 8 0.00027 44.8 5.8 104 27-167 446-552 (745)
302 2ld4_A Anamorsin; methyltransf 62.6 9.2 0.00032 34.8 5.3 20 131-150 81-100 (176)
303 3qv2_A 5-cytosine DNA methyltr 61.8 5.1 0.00017 41.9 3.7 73 1-105 16-89 (327)
304 3two_A Mannitol dehydrogenase; 61.2 19 0.00066 36.9 8.0 25 28-56 201-225 (348)
305 3uzu_A Ribosomal RNA small sub 60.9 7 0.00024 39.8 4.5 54 2-66 50-103 (279)
306 3pvc_A TRNA 5-methylaminomethy 59.7 11 0.00037 42.9 6.3 60 91-176 170-229 (689)
307 4dvj_A Putative zinc-dependent 59.1 10 0.00035 39.5 5.5 37 6-55 185-221 (363)
308 3trk_A Nonstructural polyprote 58.8 8.9 0.0003 39.4 4.7 70 90-170 209-278 (324)
309 3oig_A Enoyl-[acyl-carrier-pro 58.1 28 0.00096 33.9 8.3 124 8-152 21-148 (266)
310 1wma_A Carbonyl reductase [NAD 54.6 45 0.0015 31.9 9.0 129 3-153 11-140 (276)
311 1eg2_A Modification methylase 54.4 11 0.00039 39.0 4.8 52 91-154 57-108 (319)
312 2zig_A TTHA0409, putative modi 54.2 9.5 0.00033 38.7 4.2 60 91-152 39-98 (297)
313 4ej6_A Putative zinc-binding d 53.4 19 0.00064 37.5 6.4 24 28-55 208-231 (370)
314 3nx4_A Putative oxidoreductase 52.3 23 0.0008 35.7 6.7 23 29-55 173-195 (324)
315 2hwk_A Helicase NSP2; rossman 50.9 12 0.00039 39.0 4.0 76 91-178 205-280 (320)
316 3fpc_A NADP-dependent alcohol 50.7 12 0.0004 38.6 4.2 73 29-150 193-265 (352)
317 3jv7_A ADH-A; dehydrogenase, n 49.8 19 0.00065 36.8 5.7 37 6-55 184-220 (345)
318 3lkz_A Non-structural protein 48.4 36 0.0012 35.5 7.3 28 2-38 102-129 (321)
319 4eez_A Alcohol dehydrogenase 1 47.8 19 0.00066 36.7 5.3 25 27-55 188-212 (348)
320 3pxx_A Carveol dehydrogenase; 47.5 72 0.0025 31.1 9.3 125 4-152 18-154 (287)
321 4fs3_A Enoyl-[acyl-carrier-pro 47.3 32 0.0011 33.8 6.6 125 7-150 19-145 (256)
322 4azs_A Methyltransferase WBDD; 47.0 16 0.00056 40.6 4.9 53 2-65 74-126 (569)
323 3me5_A Cytosine-specific methy 46.4 11 0.00039 41.5 3.5 93 1-109 94-186 (482)
324 4a2c_A Galactitol-1-phosphate 46.0 25 0.00085 35.8 5.8 37 6-55 173-209 (346)
325 3o38_A Short chain dehydrogena 43.8 54 0.0019 31.8 7.7 51 7-64 34-84 (266)
326 3gaf_A 7-alpha-hydroxysteroid 42.8 49 0.0017 32.2 7.2 53 4-64 20-72 (256)
327 3s2e_A Zinc-containing alcohol 42.5 32 0.0011 35.0 6.0 36 6-55 179-214 (340)
328 3fbg_A Putative arginate lyase 42.0 17 0.00057 37.4 3.8 24 28-55 176-199 (346)
329 1gwm_A NCP1, non-catalytic pro 41.5 20 0.00069 32.4 3.6 18 90-107 107-125 (153)
330 4gua_A Non-structural polyprot 41.4 28 0.00095 39.3 5.5 74 91-176 220-293 (670)
331 3uko_A Alcohol dehydrogenase c 41.1 37 0.0013 35.2 6.3 36 6-54 206-241 (378)
332 3uog_A Alcohol dehydrogenase; 40.8 26 0.00089 36.2 5.0 24 28-55 214-237 (363)
333 4eso_A Putative oxidoreductase 40.7 50 0.0017 32.1 6.9 123 4-152 16-139 (255)
334 1qyr_A KSGA, high level kasuga 40.6 11 0.00038 37.6 2.1 52 2-66 29-80 (252)
335 1fmc_A 7 alpha-hydroxysteroid 40.2 1.4E+02 0.0048 28.2 9.9 52 4-63 19-70 (255)
336 3jyn_A Quinone oxidoreductase; 39.6 33 0.0011 34.7 5.5 22 28-53 166-187 (325)
337 4dup_A Quinone oxidoreductase; 39.6 41 0.0014 34.6 6.3 23 28-54 193-215 (353)
338 3o26_A Salutaridine reductase; 39.3 2.6E+02 0.0089 27.0 12.0 54 4-64 20-73 (311)
339 1wcu_A CBM29_1, non-catalytic 37.7 21 0.00072 32.2 3.1 17 91-107 112-129 (153)
340 3pk0_A Short-chain dehydrogena 37.6 88 0.003 30.4 8.1 54 4-64 18-71 (262)
341 4egf_A L-xylulose reductase; s 36.8 1E+02 0.0036 30.0 8.6 53 4-64 28-81 (266)
342 3qwb_A Probable quinone oxidor 36.5 38 0.0013 34.3 5.4 23 28-54 174-196 (334)
343 3pi7_A NADH oxidoreductase; gr 36.2 30 0.001 35.5 4.6 23 28-54 190-212 (349)
344 3nyw_A Putative oxidoreductase 34.7 57 0.002 31.6 6.2 54 4-64 15-70 (250)
345 1xu9_A Corticosteroid 11-beta- 34.3 1.2E+02 0.004 29.8 8.5 54 4-64 36-89 (286)
346 2hlg_A Fruit-specific protein; 34.3 13 0.00043 26.7 0.9 13 143-156 27-39 (39)
347 1e3i_A Alcohol dehydrogenase, 33.9 57 0.002 33.7 6.4 23 28-54 221-243 (376)
348 1uuf_A YAHK, zinc-type alcohol 33.8 55 0.0019 33.9 6.2 22 29-54 220-241 (369)
349 3gms_A Putative NADPH:quinone 33.6 29 0.001 35.4 4.0 35 6-54 158-192 (340)
350 3goh_A Alcohol dehydrogenase, 33.5 36 0.0012 34.2 4.6 35 6-55 155-189 (315)
351 3f1l_A Uncharacterized oxidore 33.2 1.1E+02 0.0039 29.4 8.1 52 4-62 20-71 (252)
352 1cdo_A Alcohol dehydrogenase; 32.8 53 0.0018 33.9 5.9 22 29-54 219-240 (374)
353 1xa0_A Putative NADPH dependen 32.6 99 0.0034 31.0 7.8 24 28-55 175-198 (328)
354 1i4w_A Mitochondrial replicati 32.4 46 0.0016 35.1 5.3 51 3-65 67-117 (353)
355 3swr_A DNA (cytosine-5)-methyl 32.2 60 0.0021 39.0 6.8 87 1-110 546-636 (1002)
356 2fzw_A Alcohol dehydrogenase c 32.1 76 0.0026 32.6 6.9 36 6-54 203-238 (373)
357 1p0f_A NADP-dependent alcohol 32.0 61 0.0021 33.4 6.2 36 6-54 204-239 (373)
358 3k31_A Enoyl-(acyl-carrier-pro 31.8 1.1E+02 0.0039 30.3 8.0 121 7-151 43-168 (296)
359 4eye_A Probable oxidoreductase 31.8 56 0.0019 33.3 5.8 24 28-55 185-208 (342)
360 3lf2_A Short chain oxidoreduct 31.7 1.7E+02 0.0057 28.4 9.1 54 4-64 16-70 (265)
361 3i1j_A Oxidoreductase, short c 31.6 1.7E+02 0.0057 27.7 8.9 51 4-61 22-72 (247)
362 1wg8_A Predicted S-adenosylmet 31.5 31 0.0011 35.5 3.7 36 131-169 213-248 (285)
363 1xhl_A Short-chain dehydrogena 31.4 1.4E+02 0.0048 29.7 8.6 54 4-64 34-89 (297)
364 1f8f_A Benzyl alcohol dehydrog 31.2 67 0.0023 33.1 6.3 36 6-54 203-238 (371)
365 1pl8_A Human sorbitol dehydrog 31.1 52 0.0018 33.7 5.5 24 28-55 197-220 (356)
366 1piw_A Hypothetical zinc-type 29.2 46 0.0016 34.3 4.6 23 29-55 205-227 (360)
367 4b7c_A Probable oxidoreductase 29.1 58 0.002 32.9 5.3 17 134-150 231-247 (336)
368 2jhf_A Alcohol dehydrogenase E 28.8 75 0.0026 32.7 6.2 22 29-54 218-239 (374)
369 3p8z_A Mtase, non-structural p 28.5 88 0.003 31.8 6.2 27 2-37 86-112 (267)
370 1e3j_A NADP(H)-dependent ketos 28.4 80 0.0027 32.2 6.3 22 29-54 194-215 (352)
371 3rih_A Short chain dehydrogena 28.1 76 0.0026 31.8 5.9 54 4-64 49-102 (293)
372 4dry_A 3-oxoacyl-[acyl-carrier 28.1 1.5E+02 0.0051 29.2 8.0 54 4-64 41-94 (281)
373 1ja9_A 4HNR, 1,3,6,8-tetrahydr 28.0 1.2E+02 0.0041 29.0 7.2 53 4-64 29-82 (274)
374 3qiv_A Short-chain dehydrogena 27.3 1.5E+02 0.0052 28.2 7.8 53 4-64 17-69 (253)
375 3m6i_A L-arabinitol 4-dehydrog 27.0 33 0.0011 35.2 3.1 18 134-151 266-283 (363)
376 1vj0_A Alcohol dehydrogenase, 26.9 38 0.0013 35.2 3.5 24 28-55 221-244 (380)
377 3r3s_A Oxidoreductase; structu 26.6 1.9E+02 0.0064 28.6 8.6 126 4-152 57-186 (294)
378 3ip1_A Alcohol dehydrogenase, 26.6 80 0.0028 33.0 6.0 23 28-54 239-261 (404)
379 3l77_A Short-chain alcohol deh 26.6 2E+02 0.0069 26.9 8.4 55 3-64 9-63 (235)
380 2py6_A Methyltransferase FKBM; 26.5 1.1E+02 0.0036 32.6 7.0 54 3-63 235-292 (409)
381 3grk_A Enoyl-(acyl-carrier-pro 26.2 1.9E+02 0.0064 28.7 8.5 120 8-151 45-169 (293)
382 2c0c_A Zinc binding alcohol de 26.2 77 0.0026 32.6 5.7 23 28-54 189-211 (362)
383 3t4x_A Oxidoreductase, short c 26.1 2.6E+02 0.0089 27.0 9.3 53 4-63 18-71 (267)
384 3rkr_A Short chain oxidoreduct 26.0 2.3E+02 0.0077 27.3 8.8 53 4-64 37-89 (262)
385 3svt_A Short-chain type dehydr 26.0 2.1E+02 0.007 27.9 8.6 54 4-64 19-74 (281)
386 1xkq_A Short-chain reductase f 25.9 1.6E+02 0.0054 28.8 7.7 54 4-64 14-69 (280)
387 2j8z_A Quinone oxidoreductase; 25.8 82 0.0028 32.3 5.8 39 4-53 171-209 (354)
388 3g79_A NDP-N-acetyl-D-galactos 25.3 3.2E+02 0.011 29.7 10.7 44 135-179 131-179 (478)
389 3ioy_A Short-chain dehydrogena 25.1 1.6E+02 0.0056 29.6 7.8 54 4-64 16-70 (319)
390 3krt_A Crotonyl COA reductase; 25.1 66 0.0023 34.3 5.1 24 28-55 254-277 (456)
391 3tjr_A Short chain dehydrogena 24.4 1.7E+02 0.0057 29.2 7.7 53 4-64 39-91 (301)
392 1m6y_A S-adenosyl-methyltransf 24.3 62 0.0021 33.1 4.5 35 132-169 226-260 (301)
393 1geg_A Acetoin reductase; SDR 24.2 1.9E+02 0.0064 27.8 7.8 52 4-63 10-61 (256)
394 1xg5_A ARPG836; short chain de 23.8 2.6E+02 0.009 27.0 8.9 54 4-64 40-94 (279)
395 1tt7_A YHFP; alcohol dehydroge 23.8 94 0.0032 31.2 5.7 17 134-150 230-246 (330)
396 3r1i_A Short-chain type dehydr 23.7 1.5E+02 0.005 29.2 7.0 53 4-64 40-92 (276)
397 3v2g_A 3-oxoacyl-[acyl-carrier 23.7 3E+02 0.01 26.8 9.3 127 4-153 39-167 (271)
398 3is3_A 17BETA-hydroxysteroid d 23.7 2.7E+02 0.0094 26.9 9.0 127 4-153 26-154 (270)
399 3ijr_A Oxidoreductase, short c 23.6 2.7E+02 0.0091 27.5 9.0 126 4-152 55-183 (291)
400 1wly_A CAAR, 2-haloacrylate re 23.6 82 0.0028 31.8 5.2 22 28-53 171-192 (333)
401 3sx2_A Putative 3-ketoacyl-(ac 23.4 1.8E+02 0.0063 28.1 7.6 53 4-64 21-85 (278)
402 3rku_A Oxidoreductase YMR226C; 23.0 4.1E+02 0.014 26.1 10.3 57 4-64 41-98 (287)
403 3h7a_A Short chain dehydrogena 23.0 1.7E+02 0.0059 28.1 7.3 53 4-64 15-67 (252)
404 1pqw_A Polyketide synthase; ro 22.8 78 0.0027 29.2 4.5 18 134-151 120-137 (198)
405 4ibo_A Gluconate dehydrogenase 22.4 1.9E+02 0.0064 28.3 7.5 53 4-64 34-86 (271)
406 3v2h_A D-beta-hydroxybutyrate 22.3 1.7E+02 0.0057 28.8 7.2 54 4-64 33-87 (281)
407 4ft4_B DNA (cytosine-5)-methyl 22.3 81 0.0028 36.3 5.4 42 1-46 218-259 (784)
408 2cf5_A Atccad5, CAD, cinnamyl 22.2 74 0.0025 32.7 4.6 25 28-55 205-229 (357)
409 3av4_A DNA (cytosine-5)-methyl 21.7 1E+02 0.0035 38.2 6.3 91 1-110 857-947 (1330)
410 1gee_A Glucose 1-dehydrogenase 21.4 2.9E+02 0.0098 26.2 8.5 53 4-64 15-68 (261)
411 2b5w_A Glucose dehydrogenase; 21.3 1.1E+02 0.0037 31.4 5.6 18 134-151 256-273 (357)
412 1w6u_A 2,4-dienoyl-COA reducta 21.0 2.3E+02 0.0077 27.7 7.8 54 4-64 34-87 (302)
413 3to5_A CHEY homolog; alpha(5)b 20.4 61 0.0021 28.9 3.1 28 29-56 14-41 (134)
414 1yb1_A 17-beta-hydroxysteroid 20.0 2.6E+02 0.0089 27.0 7.9 53 4-64 39-91 (272)
No 1
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=7.8e-46 Score=396.89 Aligned_cols=142 Identities=32% Similarity=0.462 Sum_probs=129.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC------CcEEEeecccccCCCcccCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT------ANLIVTNHEAQHFPGCRANKNF 74 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~------~nv~vtn~Da~~~p~~~~~~~~ 74 (648)
|||||||||+||++++. .|.|+|||++.+|+..|+++++|++. .++.+++.|+..++..
T Consensus 155 ~CAaPGGKT~~la~~~~---------~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~------ 219 (359)
T 4fzv_A 155 LCAAPGGKTLALLQTGC---------CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL------ 219 (359)
T ss_dssp SSCTTCHHHHHHHHTTC---------EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH------
T ss_pred ecCCccHHHHHHHHhcC---------CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh------
Confidence 89999999999998753 58899999999999999999999986 4789999998876421
Q ss_pred CCCCCcCcccccccccccccEEEEcCCCCCC--CccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 75 SSASDKGIESESNMGQLLFDRVLCDVPCSGD--GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~FDrILlDvPCSGd--Gtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
....||+|||||||||+ |++|++|++|++|++.++..|+.+|++||.+|+++|||||+||||||
T Consensus 220 --------------~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTC 285 (359)
T 4fzv_A 220 --------------EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTC 285 (359)
T ss_dssp --------------STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred --------------ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Confidence 12579999999999998 88899999999999999999999999999999999999999999999
Q ss_pred cCCccccHHHHHHHHHhCC
Q 006372 153 SMNPVENEAVVAEILRKCE 171 (648)
Q Consensus 153 Sl~p~ENEaVV~~~L~~~~ 171 (648)
|++|+|||+||++||++++
T Consensus 286 Sl~~~ENE~vV~~~L~~~~ 304 (359)
T 4fzv_A 286 SLSHLQNEYVVQGAIELLA 304 (359)
T ss_dssp CCCTTTTHHHHHHHHHHHH
T ss_pred CCchhhCHHHHHHHHHhCC
Confidence 9999999999999999865
No 2
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=2.7e-42 Score=382.31 Aligned_cols=321 Identities=23% Similarity=0.387 Sum_probs=248.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
||||||+||++|++++.+ .|.|+|+|++..|++.++++++|+|..|+.+++.|+..++..
T Consensus 124 l~aGpG~kt~~lA~~~~~--------~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~------------ 183 (479)
T 2frx_A 124 VAAAPGSKTTQISARMNN--------EGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAA------------ 183 (479)
T ss_dssp SSCTTSHHHHHHHHHTTT--------CSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHH------------
T ss_pred eCCCCCHHHHHHHHhCCC--------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhh------------
Confidence 799999999999998753 589999999999999999999999999999999998765320
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
....||+||+||||||+|+++++|++++.|++.++..|+.+|++||.+|+++|||||+|||||||++++|||
T Consensus 184 --------~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene 255 (479)
T 2frx_A 184 --------VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENE 255 (479)
T ss_dssp --------STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTH
T ss_pred --------ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCH
Confidence 014699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceEEEeCCCcCCccccCCCccccccccCCccccchhhHHhhhhccccCCCCCCCCCCCCcCCCCCCCC
Q 006372 161 AVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIEPKHG 240 (648)
Q Consensus 161 aVV~~~L~~~~g~veLvd~s~~lP~l~~~pGl~~W~v~~~~~~~~~~~~~~~~~~~~~~~smfp~~~~~~~~~~~~~~~~ 240 (648)
+||+++|+++++.++++++...+| |...|
T Consensus 256 ~vv~~~l~~~~~~~~~~~~~~~~~------~~~~~--------------------------------------------- 284 (479)
T 2frx_A 256 AVCLWLKETYPDAVEFLPLGDLFP------GANKA--------------------------------------------- 284 (479)
T ss_dssp HHHHHHHHHSTTTEEECCCTTSST------TGGGG---------------------------------------------
T ss_pred HHHHHHHHHCCCceeccccccccc------ccccc---------------------------------------------
Confidence 999999999987667665432221 11100
Q ss_pred CccccCCcccchhhhccccccCchhhhhccccCCceEEEccccCCCCceEEEEEEEcCCCCccccccCCcccccCCCCCC
Q 006372 241 NVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPLPVVQEKHINPEEKMLPRNDD 320 (648)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~rc~Ri~Ph~q~TgGFFiAvl~K~~~~~~~~~~~~~~~~~~~~~~~~ 320 (648)
+..+.|+|++||.++|+|||||+|+|.++.+....
T Consensus 285 ------------------------------~~~~g~~r~~P~~~~~dGfF~A~l~k~~~~~~~~~--------------- 319 (479)
T 2frx_A 285 ------------------------------LTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPA--------------- 319 (479)
T ss_dssp ------------------------------BCTTSCEEECTTTTTSCCEEEEEEEECSCCCCCCC---------------
T ss_pred ------------------------------cccCCeEEECCCCCCcCccEEEEEEEcCCCCCccc---------------
Confidence 11247899999999999999999999764322000
Q ss_pred CCccccCCcccccccccccccCCCCCCCCCcccccccCCCCCCCCCCCCCCcccccCCcccccCCCcccccccCCCcccc
Q 006372 321 PPKKLQNQDTEEVNGMEVDLADGTDEKDPEGSLEANSIDNEDGAAVEPDPLTCEKVDSEETEVPVNTETKSERTGGKRKL 400 (648)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 400 (648)
+ +.+.+
T Consensus 320 ----------------------------~---------------------------------------------~~~~~- 325 (479)
T 2frx_A 320 ----------------------------P---------------------------------------------KYKVG- 325 (479)
T ss_dssp ----------------------------C---------------------------------------------CCCCC-
T ss_pred ----------------------------c---------------------------------------------ccccc-
Confidence 0 00000
Q ss_pred cccCCcccCCCcccCC--ChhhHHHHHhHhcCCCCCCCCCceEeecCCCCcceEEEEeCHHHHHHHHhccCCCCccEEEE
Q 006372 401 QIQGKWKGIDPVIFFN--DETIINSIKTFYGIDDSFQLSGQLVSRNGDTNRVKRIYYVSKSVKDALDLNFRVGQQLKITS 478 (648)
Q Consensus 401 ~~~~~~k~~dP~~f~~--d~~~~~~I~~fYgi~~~Fp~~~~lvtRn~~g~~~k~IYyvS~~vk~il~~N~~~g~~LKii~ 478 (648)
..||..+. ..+.|+.+.++|+++.. .+..|+.|. +.||++.+...+++ .+|||+.
T Consensus 326 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~p~~~~~~~-------~~lr~~r 382 (479)
T 2frx_A 326 --------NFPFSPVKDREAGQIRQAATGVGLNWD--ENLRLWQRD------KELWLFPVGIEALI-------GKVRFSR 382 (479)
T ss_dssp --------CCSCEECCHHHHHHHHHHHHTTTBCCC--TTEEEEESS------SEEEEEEHHHHTTB-------TTBCCSE
T ss_pred --------cCCccccchhhHHHHHHHHHHcCCCCC--CCceEEEEC------CEEEEeccccchhc-------cCcEEEe
Confidence 01222222 22446777888988633 234677663 58999998765532 4699999
Q ss_pred ceeeeEEEecCCCCCCcccceeeccCchhhhhhcccCcEEEcCHHHHHHHhhcCCCCcccCCChHHHHHHhcCCCceEEE
Q 006372 479 VGLKMFERQTSREGNSAPCSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVI 558 (648)
Q Consensus 479 ~GvK~F~Rq~~~~~~~~~c~~RI~qEGl~~l~p~i~kRiv~~~~~dl~~LL~~~~~~~~~~~d~e~~e~~~~l~~Gc~Vl 558 (648)
.|+++.+... =+||.++...-.+.+.-.++++.++.+++...|..+.+....- ..-|-++|
T Consensus 383 ~G~~lg~~kk--------~rf~Ps~~la~~l~~~~~~~~~~l~~~~~~~yL~Ge~i~~~~~-----------~~~G~vlv 443 (479)
T 2frx_A 383 LGIKLAETHN--------KGYRWQHEAVIALASPDNMNAFELTPQEAEEWYRGRDVYPQAA-----------PVADDVLV 443 (479)
T ss_dssp ESEEEEEEET--------TEEEECHHHHHHHBCSSSSSEEECCHHHHHHHHTTCCCCCSSC-----------CSCSEEEE
T ss_pred cceEEEEEec--------CCceEcHHHHHhcchhhcCcEEECCHHHHHHHhcCCCCcCCCC-----------CCCCEEEE
Confidence 9999998762 2899999999988887788899999999999998777654311 13477776
Q ss_pred EEe
Q 006372 559 VLS 561 (648)
Q Consensus 559 ~~~ 561 (648)
.++
T Consensus 444 ~~~ 446 (479)
T 2frx_A 444 TFQ 446 (479)
T ss_dssp EET
T ss_pred EEC
Confidence 665
No 3
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=3.7e-40 Score=363.02 Aligned_cols=308 Identities=24% Similarity=0.400 Sum_probs=231.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
||||||+||++|++++.+ .|.|+|+|+++.|+..+++|++|+|..|+.+++.|+..++..
T Consensus 112 lcaGpGgkt~~lA~~~~~--------~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~------------ 171 (456)
T 3m4x_A 112 LCAAPGGKSTQLAAQMKG--------KGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH------------ 171 (456)
T ss_dssp SSCTTCHHHHHHHHHHTT--------CSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH------------
T ss_pred ECCCcCHHHHHHHHHcCC--------CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh------------
Confidence 799999999999999863 589999999999999999999999999999999998765311
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
....||+||+||||||+|++|++|++++.|++..+..++.+|++||.+|+++|||||+|||||||++|+|||
T Consensus 172 --------~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne 243 (456)
T 3m4x_A 172 --------FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENE 243 (456)
T ss_dssp --------HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTH
T ss_pred --------ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCH
Confidence 025699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceEEEeCCCcCCccccCCCccccccccCCccccchhhHHhhhhccccCCCCCCCCCCCCcCCCCCCCC
Q 006372 161 AVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIEPKHG 240 (648)
Q Consensus 161 aVV~~~L~~~~g~veLvd~s~~lP~l~~~pGl~~W~v~~~~~~~~~~~~~~~~~~~~~~~smfp~~~~~~~~~~~~~~~~ 240 (648)
+||+++|++++ ++++++.. .+++ .+|+..|... +
T Consensus 244 ~vv~~~l~~~~--~~l~~~~~-~~~~--~~~~~~~~~~-------------------------~---------------- 277 (456)
T 3m4x_A 244 EIISWLVENYP--VTIEEIPL-TQSV--SSGRSEWGSV-------------------------A---------------- 277 (456)
T ss_dssp HHHHHHHHHSS--EEEECCCC-SSCC--EECCGGGSSS-------------------------T----------------
T ss_pred HHHHHHHHhCC--CEEEeccc-cccc--cccccccccc-------------------------c----------------
Confidence 99999999986 99988753 2221 2344444200 0
Q ss_pred CccccCCcccchhhhccccccCchhhhhccccCCceEEEccccCCCCceEEEEEEEcCCCCccccccCCcccccCCCCCC
Q 006372 241 NVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPLPVVQEKHINPEEKMLPRNDD 320 (648)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~rc~Ri~Ph~q~TgGFFiAvl~K~~~~~~~~~~~~~~~~~~~~~~~~ 320 (648)
.++.|+|++||.++|+|||||+|+|.+..+.. +..
T Consensus 278 -------------------------------~~~~~~r~~P~~~~~dGFF~A~l~k~~~~~~~------~~~-------- 312 (456)
T 3m4x_A 278 -------------------------------GLEKTIRIWPHKDQGEGHFVAKLTFHGQNQMH------KEK-------- 312 (456)
T ss_dssp -------------------------------TGGGSEEECTTTSSSSCEEEEEEEECSCCCCC------C----------
T ss_pred -------------------------------ccCCeEEECCCCCCCcCeEEEEEEECCCCccc------ccc--------
Confidence 14689999999999999999999997642100 000
Q ss_pred CCccccCCcccccccccccccCCCCCCCCCcccccccCCCCCCCCCCCCCCcccccCCcccccCCCcccccccCCCcccc
Q 006372 321 PPKKLQNQDTEEVNGMEVDLADGTDEKDPEGSLEANSIDNEDGAAVEPDPLTCEKVDSEETEVPVNTETKSERTGGKRKL 400 (648)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 400 (648)
......+.+.
T Consensus 313 ----------------------------------------------------------------------~~~~~~~~~~ 322 (456)
T 3m4x_A 313 ----------------------------------------------------------------------KTRKKSKVQM 322 (456)
T ss_dssp -----------------------------------------------------------------------------CSC
T ss_pred ----------------------------------------------------------------------cccccccccC
Confidence 0000000000
Q ss_pred cccCCcccCCCcccCCChhhHHHHHhHhcCCCCCCCCCceEeecCCCCcceEEEEeCHHHHHHHHhccCCCCccEEEEce
Q 006372 401 QIQGKWKGIDPVIFFNDETIINSIKTFYGIDDSFQLSGQLVSRNGDTNRVKRIYYVSKSVKDALDLNFRVGQQLKITSVG 480 (648)
Q Consensus 401 ~~~~~~k~~dP~~f~~d~~~~~~I~~fYgi~~~Fp~~~~lvtRn~~g~~~k~IYyvS~~vk~il~~N~~~g~~LKii~~G 480 (648)
.+ ...+.|+....-|++. + ...++.++ ..||++-....+ . .+|||+..|
T Consensus 323 ---------~~----~~~~~~~~~~~~~~~~---~-~~~~~~~~------~~~~~~p~~~~~------~--~~l~~~r~G 371 (456)
T 3m4x_A 323 ---------TK----EQEKLWTEFSNDFHYE---A-TGRLLVFN------DHLWEVPELAPS------L--DGLKVVRTG 371 (456)
T ss_dssp ---------CH----HHHHHHHHHHHHTTCC---C-CSEEEEET------TEEEEECTTCCC------C--TTCCEEEES
T ss_pred ---------cH----HHHHHHHHHHHHhccC---C-CCceEEEC------CEEEEeccCccc------c--cCCeEEEcC
Confidence 00 0112344444444442 2 23566553 589998765321 1 579999999
Q ss_pred eeeEEEecCCCCCCcccceeeccCchhhhhhcccCcEEEcCHHHHHHHhhcCCCCc
Q 006372 481 LKMFERQTSREGNSAPCSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKF 536 (648)
Q Consensus 481 vK~F~Rq~~~~~~~~~c~~RI~qEGl~~l~p~i~kRiv~~~~~dl~~LL~~~~~~~ 536 (648)
+++=+-.. =+|+.++...-.+.+--.++.+.++.++....|..+.+..
T Consensus 372 ~~lg~~kk--------~~f~p~~~la~~l~~~~~~~~~~l~~~~~~~yl~ge~i~~ 419 (456)
T 3m4x_A 372 LHLGDFKK--------NRFEPSYALALATKKIENIPCLPITQKEWQSYTAGETFQR 419 (456)
T ss_dssp EEEEEEET--------TEEEECHHHHHTCCCGGGSCEEEECHHHHHHHHHTCCEEC
T ss_pred ceeeEEeC--------CceeECHHHHHhcCccccCcEEEcCHHHHHHHhCCCCccc
Confidence 99977542 2788888877776665557789999999999998776543
No 4
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=2e-40 Score=348.38 Aligned_cols=152 Identities=25% Similarity=0.318 Sum_probs=121.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
|||||||||++|++++.+ .|.|+|+|++..|++.++++++|+|..|+.+++.|+..++...
T Consensus 109 lcaG~G~kt~~la~~~~~--------~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~----------- 169 (309)
T 2b9e_A 109 ACAAPGNKTSHLAALLKN--------QGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSD----------- 169 (309)
T ss_dssp SSCTTCHHHHHHHHHHTT--------CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTC-----------
T ss_pred eCCChhHHHHHHHHHhCC--------CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccc-----------
Confidence 799999999999999853 5899999999999999999999999999999999987753210
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCccccc--ccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWR--KWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE 158 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~--kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E 158 (648)
.....||+||+||||||+|++||+|++++ +|++.++..|+.+|++||.+|+++|+ ||+|||||||++|+|
T Consensus 170 -------~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~E 241 (309)
T 2b9e_A 170 -------PRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEE 241 (309)
T ss_dssp -------GGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGG
T ss_pred -------cccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHH
Confidence 01146999999999999999999999843 47888999999999999999999997 999999999999999
Q ss_pred cHHHHHHHHHhCCCceEEEeC
Q 006372 159 NEAVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 159 NEaVV~~~L~~~~g~veLvd~ 179 (648)
||+||.++|+++++.++++++
T Consensus 242 ne~~v~~~l~~~~~~~~~~~~ 262 (309)
T 2b9e_A 242 NEDVVRDALQQNPGAFRLAPA 262 (309)
T ss_dssp THHHHHHHHTTSTTTEEECCC
T ss_pred hHHHHHHHHHhCCCcEEEecc
Confidence 999999999998766888765
No 5
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=2.2e-37 Score=325.07 Aligned_cols=191 Identities=32% Similarity=0.514 Sum_probs=158.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|||||+||.+|++++.+ .|.|+|+|+++.|++.++++++++|..++.+++.|+..++..
T Consensus 125 lg~G~G~~t~~la~~~~~--------~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~------------ 184 (315)
T 1ixk_A 125 MAAAPGGKTSYLAQLMRN--------DGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGEL------------ 184 (315)
T ss_dssp CCSSCSHHHHHHHHHTTT--------CSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGG------------
T ss_pred eCCCCCHHHHHHHHHhCC--------CCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccc------------
Confidence 799999999999998753 589999999999999999999999999999999998775420
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
...||+||+|+||||.|+++++|++++.|++.++..++.+|.++|.+++++|||||+|||||||++|+|||
T Consensus 185 ---------~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene 255 (315)
T 1ixk_A 185 ---------NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENE 255 (315)
T ss_dssp ---------CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTH
T ss_pred ---------cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhH
Confidence 14699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceEEEeCCCcCCccccCCCccccccccCCccccchhhHHhhhhccccCCCCCCCCCCCCcCCCCCCCC
Q 006372 161 AVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIEPKHG 240 (648)
Q Consensus 161 aVV~~~L~~~~g~veLvd~s~~lP~l~~~pGl~~W~v~~~~~~~~~~~~~~~~~~~~~~~smfp~~~~~~~~~~~~~~~~ 240 (648)
+||.++|++++ ++++++.. ..+|+..|.... |+
T Consensus 256 ~~v~~~l~~~~--~~~~~~~~------~~~~~~~~~~~~-----------------------~~---------------- 288 (315)
T 1ixk_A 256 FVIQWALDNFD--VELLPLKY------GEPALTNPFGIE-----------------------LS---------------- 288 (315)
T ss_dssp HHHHHHHHHSS--EEEECCCS------SEECCSSGGGCC-----------------------CC----------------
T ss_pred HHHHHHHhcCC--CEEecCCc------cccCcccccccc-----------------------cc----------------
Confidence 99999999864 88887641 235666664210 00
Q ss_pred CccccCCcccchhhhccccccCchhhhhccccCCceEEEccccCCCCceEEEEEEEc
Q 006372 241 NVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKV 297 (648)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~rc~Ri~Ph~q~TgGFFiAvl~K~ 297 (648)
. .+++|+|++||.++|+|||||+|+|.
T Consensus 289 -------------------------~-----~~~~~~r~~P~~~~~dGfF~A~l~k~ 315 (315)
T 1ixk_A 289 -------------------------E-----EIKNARRLYPDVHETSGFFIAKIRKL 315 (315)
T ss_dssp -------------------------G-----GGGGSEEECTTTSSSCSEEEEEEEEC
T ss_pred -------------------------c-----ccCCEEEECCCCCCcccEEEEEEEEC
Confidence 0 14689999999999999999999984
No 6
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=1.5e-37 Score=342.88 Aligned_cols=195 Identities=32% Similarity=0.520 Sum_probs=166.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
||||||+||++|++++.+ .|.|+|+|+++.|+..++++++|+|.. +.+++.|+..++..
T Consensus 108 lgaGpG~kt~~LA~~~~~--------~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~------------ 166 (464)
T 3m6w_A 108 LAAAPGGKTTHLAARMGG--------KGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEA------------ 166 (464)
T ss_dssp SSCTTCHHHHHHHHHTTT--------CSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHH------------
T ss_pred EcCCcCHHHHHHHHhCCC--------CCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhh------------
Confidence 799999999999998753 589999999999999999999999998 99999988765310
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
....||+||+||||||+|+++++|++.+.|++.++..++.+|.+||.+|+++|||||+|||||||++|+|||
T Consensus 167 --------~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne 238 (464)
T 3m6w_A 167 --------FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENE 238 (464)
T ss_dssp --------HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTH
T ss_pred --------ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCH
Confidence 025699999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceEEEeCCCcCCccccCCCccccccccCCccccchhhHHhhhhccccCCCCCCCCCCCCcCCCCCCCC
Q 006372 161 AVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDATDIEPKHG 240 (648)
Q Consensus 161 aVV~~~L~~~~g~veLvd~s~~lP~l~~~pGl~~W~v~~~~~~~~~~~~~~~~~~~~~~~smfp~~~~~~~~~~~~~~~~ 240 (648)
+||+++|++++ .++++++.... + ..+|...|...
T Consensus 239 ~vv~~~l~~~~-~~~l~~~~~~~-~--~~~~~~~~~~~------------------------------------------ 272 (464)
T 3m6w_A 239 GVVAHFLKAHP-EFRLEDARLHP-L--FAPGVPEWGEG------------------------------------------ 272 (464)
T ss_dssp HHHHHHHHHCT-TEEEECCCCST-T--SEECCGGGTTT------------------------------------------
T ss_pred HHHHHHHHHCC-CcEEEeccccc-c--cccCccccccc------------------------------------------
Confidence 99999999986 58988875321 1 13444444200
Q ss_pred CccccCCcccchhhhccccccCchhhhhccccCCceEEEccccCCCCceEEEEEEEcCC
Q 006372 241 NVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSP 299 (648)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~rc~Ri~Ph~q~TgGFFiAvl~K~~~ 299 (648)
...++.|+|++||.++|+|||||+|+|.+.
T Consensus 273 -----------------------------~~~~~~~~r~~P~~~~~dGfF~A~l~k~~~ 302 (464)
T 3m6w_A 273 -----------------------------NPELLKTARLWPHRLEGEGHFLARFRKEGG 302 (464)
T ss_dssp -----------------------------CGGGGGSEEECTTTSSSSCEEEEEEEECSC
T ss_pred -----------------------------ccccCCeEEECCCCCCceeEEEEEEEECCC
Confidence 011467999999999999999999999865
No 7
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=6.6e-34 Score=312.33 Aligned_cols=151 Identities=32% Similarity=0.478 Sum_probs=135.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|||||+||.+|++++.+ .|.|+|+|+++.|+..++++++++|..++.+++.|+..++..
T Consensus 266 lgaG~G~~t~~la~~~~~--------~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~------------ 325 (450)
T 2yxl_A 266 LAAAPGGKTTHLAELMKN--------KGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI------------ 325 (450)
T ss_dssp SSCTTCHHHHHHHHHTTT--------CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS------------
T ss_pred eCCCccHHHHHHHHHcCC--------CCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh------------
Confidence 799999999999998742 489999999999999999999999999999999998775421
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
.....||+||+||||||.|+++++|++++.|++.++..++.+|.+||.+++++|||||+|||||||++|+|||
T Consensus 326 -------~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene 398 (450)
T 2yxl_A 326 -------IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENE 398 (450)
T ss_dssp -------SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTH
T ss_pred -------hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHH
Confidence 0114699999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceEEEeC
Q 006372 161 AVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 161 aVV~~~L~~~~g~veLvd~ 179 (648)
++|.++|+++++ ++++++
T Consensus 399 ~~v~~~l~~~~~-~~~~~~ 416 (450)
T 2yxl_A 399 KNIRWFLNVHPE-FKLVPL 416 (450)
T ss_dssp HHHHHHHHHCSS-CEECCC
T ss_pred HHHHHHHHhCCC-CEEeec
Confidence 999999999863 666543
No 8
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=8.8e-34 Score=291.22 Aligned_cols=161 Identities=32% Similarity=0.482 Sum_probs=126.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|||||+||.+|++++.+ .+.|+|+|+++.|++.++++++++|.+++.+++.|+..++...
T Consensus 90 lgaG~G~~t~~la~~~~~--------~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~----------- 150 (274)
T 3ajd_A 90 MCAAPGGKTTHLAQLMKN--------KGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYL----------- 150 (274)
T ss_dssp TTCTTCHHHHHHHHHTTT--------CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-----------
T ss_pred eCCCccHHHHHHHHHcCC--------CCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhh-----------
Confidence 699999999999998752 4899999999999999999999999999999999987653100
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
......||+||+||||||.|+++|+| +|++.++..+...|.++|.+++++|||||+|||||||++++|||
T Consensus 151 ------~~~~~~fD~Vl~d~Pcs~~g~~~~~p----~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene 220 (274)
T 3ajd_A 151 ------LKNEIFFDKILLDAPCSGNIIKDKNR----NVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENE 220 (274)
T ss_dssp ------HHTTCCEEEEEEEECCC----------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSH
T ss_pred ------hhccccCCEEEEcCCCCCCcccccCC----CCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhH
Confidence 00024699999999999999999998 68899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceEEEeCCCcCCccccCCCccccc
Q 006372 161 AVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWK 196 (648)
Q Consensus 161 aVV~~~L~~~~g~veLvd~s~~lP~l~~~pGl~~W~ 196 (648)
+||.++|++++ .++++++. ++. .+|+..|.
T Consensus 221 ~~v~~~l~~~~-~~~~~~~~--~~~---~~~~~~~~ 250 (274)
T 3ajd_A 221 EVIKYILQKRN-DVELIIIK--ANE---FKGINIKE 250 (274)
T ss_dssp HHHHHHHHHCS-SEEEECCC--STT---CTTSCEEE
T ss_pred HHHHHHHHhCC-CcEEecCc--ccc---ccCccccc
Confidence 99999999875 58988875 221 35655553
No 9
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.98 E-value=3.2e-32 Score=296.93 Aligned_cols=146 Identities=35% Similarity=0.511 Sum_probs=129.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|||||+||.+|++++. .|.|+|+|+++.|+..++++++++|.. +.+.+.|+..++..
T Consensus 253 lgaG~G~~t~~la~~~~---------~~~v~a~D~~~~~l~~~~~~~~~~g~~-~~~~~~D~~~~~~~------------ 310 (429)
T 1sqg_A 253 LCAAPGGKTTHILEVAP---------EAQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQW------------ 310 (429)
T ss_dssp ESCTTCHHHHHHHHHCT---------TCEEEEEESSTTTHHHHHHHHHHTTCC-CEEEECCTTCTHHH------------
T ss_pred ECCCchHHHHHHHHHcC---------CCEEEEECCCHHHHHHHHHHHHHcCCC-eEEEeCchhhchhh------------
Confidence 69999999999999853 489999999999999999999999984 67778887664310
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
.....||+||+||||||.|+++++|++++.|++.++..++.+|.++|.+++++|||||+|||||||++|+|||
T Consensus 311 -------~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene 383 (429)
T 1sqg_A 311 -------CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENS 383 (429)
T ss_dssp -------HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTH
T ss_pred -------cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHH
Confidence 1124699999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCceEE
Q 006372 161 AVVAEILRKCEGSVEL 176 (648)
Q Consensus 161 aVV~~~L~~~~g~veL 176 (648)
++|.++|+++++ +++
T Consensus 384 ~~v~~~l~~~~~-~~~ 398 (429)
T 1sqg_A 384 LQIKAFLQRTAD-AEL 398 (429)
T ss_dssp HHHHHHHHHCTT-CEE
T ss_pred HHHHHHHHhCCC-CEE
Confidence 999999998753 444
No 10
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.39 E-value=9.7e-13 Score=132.92 Aligned_cols=129 Identities=21% Similarity=0.247 Sum_probs=96.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|||||++|.+|++++. ++|.|+|+|.++.++..|.+..++. +|+.+...|+.......
T Consensus 83 lG~GtG~~t~~la~~v~--------~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~----------- 141 (232)
T 3id6_C 83 LGAASGTTISHVSDIIE--------LNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYK----------- 141 (232)
T ss_dssp ETCTTSHHHHHHHHHHT--------TTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTT-----------
T ss_pred EeecCCHHHHHHHHHhC--------CCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhh-----------
Confidence 59999999999999875 3799999999999987776665543 68888889987532100
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhh-ccccCcEEEEe---cc---c
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGIS-LLKVGGRIVYS---TC---S 153 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~-lLk~GG~LVYS---TC---S 153 (648)
.....||.|++|++- ..|.++|...++ +|||||+||+| || +
T Consensus 142 -------~~~~~~D~I~~d~a~-------------------------~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t 189 (232)
T 3id6_C 142 -------SVVENVDVLYVDIAQ-------------------------PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVT 189 (232)
T ss_dssp -------TTCCCEEEEEECCCC-------------------------TTHHHHHHHHHHHHEEEEEEEEEEEC-------
T ss_pred -------ccccceEEEEecCCC-------------------------hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccC
Confidence 001479999999871 235666665555 99999999977 99 9
Q ss_pred CCccccHHHHHHHHHhCCCceEEEeCCCcCC
Q 006372 154 MNPVENEAVVAEILRKCEGSVELVDVSNEVP 184 (648)
Q Consensus 154 l~p~ENEaVV~~~L~~~~g~veLvd~s~~lP 184 (648)
++|+||.+.+.++|++++ |++++.....|
T Consensus 190 ~~~~e~~~~~~~~L~~~g--f~~~~~~~l~p 218 (232)
T 3id6_C 190 KDPKEIYKTEVEKLENSN--FETIQIINLDP 218 (232)
T ss_dssp CCSSSSTTHHHHHHHHTT--EEEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHHCC--CEEEEEeccCC
Confidence 999999999999999874 88877654444
No 11
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.32 E-value=5.3e-12 Score=136.63 Aligned_cols=134 Identities=16% Similarity=0.121 Sum_probs=106.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||++|+.|.+++.. +.. |+|+|+|+..++.+++|++++|..+ .+.+.|+..+...
T Consensus 221 lg~GtG~~sl~~a~~----------ga~-V~avDis~~al~~a~~n~~~ng~~~-~~~~~D~~~~l~~------------ 276 (393)
T 4dmg_A 221 VYSYVGGFALRAARK----------GAY-ALAVDKDLEALGVLDQAALRLGLRV-DIRHGEALPTLRG------------ 276 (393)
T ss_dssp ESCTTTHHHHHHHHT----------TCE-EEEEESCHHHHHHHHHHHHHHTCCC-EEEESCHHHHHHT------------
T ss_pred cccchhHHHHHHHHc----------CCe-EEEEECCHHHHHHHHHHHHHhCCCC-cEEEccHHHHHHH------------
Confidence 699999999999773 134 9999999999999999999999864 3457777654210
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
. ...||.|++||||-.. +..........+.+++..|+++|||||+|+|+|||.++.+++
T Consensus 277 -------~-~~~fD~Ii~dpP~f~~-------------~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~ 335 (393)
T 4dmg_A 277 -------L-EGPFHHVLLDPPTLVK-------------RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLED 335 (393)
T ss_dssp -------C-CCCEEEEEECCCCCCS-------------SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHH
T ss_pred -------h-cCCCCEEEECCCcCCC-------------CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHH
Confidence 0 1239999999998221 223456677889999999999999999999999999999888
Q ss_pred --HHHHHHHHhCCCceEEEeC
Q 006372 161 --AVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 161 --aVV~~~L~~~~g~veLvd~ 179 (648)
.+|..++.+.+..++++..
T Consensus 336 f~~~v~~a~~~~g~~~~i~~~ 356 (393)
T 4dmg_A 336 LLEVARRAAADLGRRLRVHRV 356 (393)
T ss_dssp HHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHHhCCeEEEEEE
Confidence 8888888887777777764
No 12
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.23 E-value=4.3e-11 Score=128.28 Aligned_cols=139 Identities=21% Similarity=0.177 Sum_probs=111.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||++|+.+.+++.. .+.|+++|+++..+..++++++++|..++.+.+.|+..+....
T Consensus 216 lg~G~G~~~~~la~~-----------~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~----------- 273 (382)
T 1wxx_A 216 VFSYAGGFALHLALG-----------FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRL----------- 273 (382)
T ss_dssp ETCTTTHHHHHHHHH-----------EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHH-----------
T ss_pred eeeccCHHHHHHHHh-----------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHH-----------
Confidence 589999999999875 2689999999999999999999999988888888876642100
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcccc-
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVEN- 159 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~EN- 159 (648)
......||.|++|||+.+.+ ..........+.+++..++++|+|||+|+|||||.+..++
T Consensus 274 ------~~~~~~fD~Ii~dpP~~~~~-------------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 334 (382)
T 1wxx_A 274 ------EKEGERFDLVVLDPPAFAKG-------------KKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPL 334 (382)
T ss_dssp ------HHTTCCEEEEEECCCCSCCS-------------TTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHH
T ss_pred ------HhcCCCeeEEEECCCCCCCC-------------hhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHH
Confidence 00125799999999975432 2234566788899999999999999999999999888775
Q ss_pred -HHHHHHHHHhCCCceEEEeCC
Q 006372 160 -EAVVAEILRKCEGSVELVDVS 180 (648)
Q Consensus 160 -EaVV~~~L~~~~g~veLvd~s 180 (648)
+.+|..++.+.+..++++...
T Consensus 335 ~~~~i~~~~~~~g~~~~~i~~~ 356 (382)
T 1wxx_A 335 FYAMVAEAAQDAHRLLRVVEKR 356 (382)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEEEcC
Confidence 788888888877778887643
No 13
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.09 E-value=3.1e-10 Score=121.97 Aligned_cols=138 Identities=14% Similarity=0.055 Sum_probs=107.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||++|+.|.+++.. +.+.|+++|+++..+..+++++++.|.. ++.+.+.|+..++...
T Consensus 224 l~~G~G~~~~~la~~----------g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~---------- 283 (396)
T 2as0_A 224 VFTYTGGFAIHAAIA----------GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKL---------- 283 (396)
T ss_dssp TTCTTTHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH----------
T ss_pred ecCCCCHHHHHHHHC----------CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHH----------
Confidence 689999999999763 1358999999999999999999999987 8999988876542100
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc-
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE- 158 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E- 158 (648)
......||.|++|+|+.+.. ..........+..++..++++|+|||+|+|+||+.+..+
T Consensus 284 -------~~~~~~fD~Vi~dpP~~~~~-------------~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~ 343 (396)
T 2as0_A 284 -------QKKGEKFDIVVLDPPAFVQH-------------EKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQ 343 (396)
T ss_dssp -------HHTTCCEEEEEECCCCSCSS-------------GGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHH
T ss_pred -------HhhCCCCCEEEECCCCCCCC-------------HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHH
Confidence 00125799999999964422 223445567788999999999999999999999976554
Q ss_pred -cHHHHHHHHHhCCCceEEEe
Q 006372 159 -NEAVVAEILRKCEGSVELVD 178 (648)
Q Consensus 159 -NEaVV~~~L~~~~g~veLvd 178 (648)
.+.+|..++...+..++++.
T Consensus 344 ~~~~~v~~~~~~~~~~~~~i~ 364 (396)
T 2as0_A 344 MFKDMIIAAGAKAGKFLKMLE 364 (396)
T ss_dssp HHHHHHHHHHHHTTEEEEESS
T ss_pred HHHHHHHHHHHHcCCeEEEEe
Confidence 57888888877766677765
No 14
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.05 E-value=1.9e-10 Score=123.79 Aligned_cols=139 Identities=14% Similarity=0.091 Sum_probs=107.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-C-cEEEeecccccCCCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-A-NLIVTNHEAQHFPGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~-nv~vtn~Da~~~p~~~~~~~~~~~~ 78 (648)
+||++|+.+.+++.. +.+.|+|+|+++..+..+++|++++|. . ++.+...|+..+....
T Consensus 227 l~cG~G~~sl~la~~----------g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~--------- 287 (396)
T 3c0k_A 227 CFSYTGGFAVSALMG----------GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTY--------- 287 (396)
T ss_dssp ESCTTCSHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHH---------
T ss_pred eeccCCHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHH---------
Confidence 589999999999763 135899999999999999999999998 6 8999998876642100
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcc-
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV- 157 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~- 157 (648)
......||.|++|||+.+.+. .........+..++..++++|+|||+|++|+|+.+..
T Consensus 288 --------~~~~~~fD~Ii~dpP~~~~~~-------------~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 346 (396)
T 3c0k_A 288 --------RDRGEKFDVIVMDPPKFVENK-------------SQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTS 346 (396)
T ss_dssp --------HHTTCCEEEEEECCSSTTTCS-------------SSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCH
T ss_pred --------HhcCCCCCEEEECCCCCCCCh-------------hHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCH
Confidence 001247999999999755431 1122233457789999999999999999999997766
Q ss_pred -ccHHHHHHHHHhCCCceEEEeC
Q 006372 158 -ENEAVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 158 -ENEaVV~~~L~~~~g~veLvd~ 179 (648)
+++.+|..++.+.+..++++..
T Consensus 347 ~~~~~~i~~~~~~~g~~~~~i~~ 369 (396)
T 3c0k_A 347 DLFQKIIADAAIDAGRDVQFIEQ 369 (396)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEEE
Confidence 7789999888877767777754
No 15
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.99 E-value=1.1e-09 Score=126.79 Aligned_cols=126 Identities=13% Similarity=0.047 Sum_probs=95.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC--cEEEeecccccCCCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQHFPGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~--nv~vtn~Da~~~p~~~~~~~~~~~~ 78 (648)
+||++|+.+.+++.. +...|+++|+|+..+..+++|+++.|.. ++.+.+.|+..+...
T Consensus 546 lg~GtG~~sl~aa~~----------ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~---------- 605 (703)
T 3v97_A 546 LFSYTGSATVHAGLG----------GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---------- 605 (703)
T ss_dssp ESCTTCHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH----------
T ss_pred eeechhHHHHHHHHC----------CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh----------
Confidence 599999999988752 1357999999999999999999999986 799999998664210
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE 158 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E 158 (648)
....||.|++||||.+.+.- . .........+.+|+..|+++|+|||+|++|||+-....
T Consensus 606 ----------~~~~fD~Ii~DPP~f~~~~~--~---------~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~ 664 (703)
T 3v97_A 606 ----------ANEQFDLIFIDPPTFSNSKR--M---------EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRM 664 (703)
T ss_dssp ----------CCCCEEEEEECCCSBC------------------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCC
T ss_pred ----------cCCCccEEEECCccccCCcc--c---------hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccccc
Confidence 12579999999999665431 1 11224557889999999999999999999999955555
Q ss_pred cHHHHHHHHHhCC
Q 006372 159 NEAVVAEILRKCE 171 (648)
Q Consensus 159 NEaVV~~~L~~~~ 171 (648)
++ ..|.+.+
T Consensus 665 ~~----~~l~~~g 673 (703)
T 3v97_A 665 DL----DGLAKLG 673 (703)
T ss_dssp CH----HHHHHTT
T ss_pred CH----HHHHHcC
Confidence 54 3445554
No 16
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.99 E-value=2.8e-10 Score=122.55 Aligned_cols=115 Identities=16% Similarity=0.089 Sum_probs=90.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh---------------CCCcEEEeecccccC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM---------------CTANLIVTNHEAQHF 65 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl---------------g~~nv~vtn~Da~~~ 65 (648)
+|||+|..+.+++..+. ...|+|||+++.+++++++|++++ |..++.+++.|+..+
T Consensus 54 l~aGtG~~~l~~a~~~~---------~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~ 124 (378)
T 2dul_A 54 ALSATGIRGIRFALETP---------AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRL 124 (378)
T ss_dssp SSCTTSHHHHHHHHHSS---------CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHH
T ss_pred CCCchhHHHHHHHHhCC---------CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHH
Confidence 69999999999988742 346999999999999999999999 887789999988664
Q ss_pred CCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCc
Q 006372 66 PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG 145 (648)
Q Consensus 66 p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG 145 (648)
... ....||.|++||||+. ..+|..|+++||+||
T Consensus 125 ~~~--------------------~~~~fD~I~lDP~~~~--------------------------~~~l~~a~~~lk~gG 158 (378)
T 2dul_A 125 MAE--------------------RHRYFHFIDLDPFGSP--------------------------MEFLDTALRSAKRRG 158 (378)
T ss_dssp HHH--------------------STTCEEEEEECCSSCC--------------------------HHHHHHHHHHEEEEE
T ss_pred HHh--------------------ccCCCCEEEeCCCCCH--------------------------HHHHHHHHHhcCCCC
Confidence 210 0146999999999862 367899999999999
Q ss_pred EEEEecccCCccccHHHHHHHHHhCC
Q 006372 146 RIVYSTCSMNPVENEAVVAEILRKCE 171 (648)
Q Consensus 146 ~LVYSTCSl~p~ENEaVV~~~L~~~~ 171 (648)
++|.||+-....+.......+++++
T Consensus 159 -~l~vt~td~~~l~~~~~~~~~~~yg 183 (378)
T 2dul_A 159 -ILGVTATDGAPLCGAHPRACLRKYL 183 (378)
T ss_dssp -EEEEEECCHHHHTTSSHHHHHHHHS
T ss_pred -EEEEEeecchhhccccHHHHHHHcc
Confidence 7899998655444344556666655
No 17
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.96 E-value=4.7e-10 Score=121.48 Aligned_cols=116 Identities=18% Similarity=0.105 Sum_probs=90.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc--EEEeecccccCCC-cccCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN--LIVTNHEAQHFPG-CRANKNFSSA 77 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n--v~vtn~Da~~~p~-~~~~~~~~~~ 77 (648)
||||+|+++.+++..+. +.+.|+|+|+++.+++++++|++++|..+ +.+++.|+..+.. ..
T Consensus 59 lfaGtG~~sl~aa~~~~--------ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~-------- 122 (392)
T 3axs_A 59 PLSASGIRAIRFLLETS--------CVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW-------- 122 (392)
T ss_dssp SSCTTSHHHHHHHHHCS--------CEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC--------
T ss_pred CCCcccHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh--------
Confidence 69999999999987642 14789999999999999999999999976 9999999876421 00
Q ss_pred CCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcc
Q 006372 78 SDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 157 (648)
Q Consensus 78 ~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ 157 (648)
...||+|++||+|+. ..+|..|+++|++|| ++|+||+-...
T Consensus 123 ------------~~~fD~V~lDP~g~~--------------------------~~~l~~a~~~Lk~gG-ll~~t~t~~~~ 163 (392)
T 3axs_A 123 ------------GFGFDYVDLDPFGTP--------------------------VPFIESVALSMKRGG-ILSLTATDTAP 163 (392)
T ss_dssp ------------SSCEEEEEECCSSCC--------------------------HHHHHHHHHHEEEEE-EEEEEECCHHH
T ss_pred ------------CCCCcEEEECCCcCH--------------------------HHHHHHHHHHhCCCC-EEEEEecchhh
Confidence 146999999997531 247889999999988 88999976554
Q ss_pred ccHHHHHHHHHhCC
Q 006372 158 ENEAVVAEILRKCE 171 (648)
Q Consensus 158 ENEaVV~~~L~~~~ 171 (648)
.....+...+++++
T Consensus 164 l~g~~~~~~~rkYg 177 (392)
T 3axs_A 164 LSGTYPKTCMRRYM 177 (392)
T ss_dssp HTTSSHHHHHHHHS
T ss_pred hccccHHHHHHHhC
Confidence 33334556667765
No 18
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.85 E-value=1.5e-08 Score=103.88 Aligned_cols=120 Identities=21% Similarity=0.243 Sum_probs=96.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||++|+.+..++... .. .|+|+|.++..++.+++++++.+..+ +.+.+.|+..++.
T Consensus 132 lgcG~G~~~~~la~~~---------~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~------------ 189 (278)
T 2frn_A 132 MFAGIGHLSLPIAVYG---------KA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG------------ 189 (278)
T ss_dssp TTCTTTTTHHHHHHHT---------CC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC------------
T ss_pred ecccCCHHHHHHHHhC---------CC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc------------
Confidence 6899999999998752 12 79999999999999999999999876 8889999877542
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC---Cc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM---NP 156 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl---~p 156 (648)
...||.|++|+|++. ..+|..++++|||||++++++|+- .+
T Consensus 190 ----------~~~fD~Vi~~~p~~~--------------------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 233 (278)
T 2frn_A 190 ----------ENIADRILMGYVVRT--------------------------HEFIPKALSIAKDGAIIHYHNTVPEKLMP 233 (278)
T ss_dssp ----------CSCEEEEEECCCSSG--------------------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTT
T ss_pred ----------cCCccEEEECCchhH--------------------------HHHHHHHHHHCCCCeEEEEEEeecccccc
Confidence 156999999999533 235778999999999999999984 34
Q ss_pred cccHHHHHHHHHhCCCceEEEe
Q 006372 157 VENEAVVAEILRKCEGSVELVD 178 (648)
Q Consensus 157 ~ENEaVV~~~L~~~~g~veLvd 178 (648)
.+..+.+..++++.+..++.+.
T Consensus 234 ~~~~~~i~~~~~~~G~~~~~~~ 255 (278)
T 2frn_A 234 REPFETFKRITKEYGYDVEKLN 255 (278)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEE
T ss_pred ccHHHHHHHHHHHcCCeeEEee
Confidence 5566777888888876666544
No 19
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.83 E-value=6.3e-09 Score=111.90 Aligned_cols=133 Identities=12% Similarity=0.062 Sum_probs=99.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC--cEEEeecccccCCCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQHFPGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~--nv~vtn~Da~~~p~~~~~~~~~~~~ 78 (648)
+||++|+.+.+++.. +.+.|+++|+++..++..++|+++.|.. ++.+.+.|+..+....
T Consensus 219 l~cGtG~~sl~la~~----------ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~--------- 279 (385)
T 2b78_A 219 LFSYTAAFSVAAAMG----------GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYA--------- 279 (385)
T ss_dssp ETCTTTHHHHHHHHT----------TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHH---------
T ss_pred EeeccCHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHH---------
Confidence 589999999998763 1358999999999999999999999986 8999999886532100
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc--
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP-- 156 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p-- 156 (648)
......||.|++|||+.+.+. .........+.+|+..++++|+|||+|++|+|+-..
T Consensus 280 --------~~~~~~fD~Ii~DPP~~~~~~-------------~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~ 338 (385)
T 2b78_A 280 --------RRHHLTYDIIIIDPPSFARNK-------------KEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTV 338 (385)
T ss_dssp --------HHTTCCEEEEEECCCCC------------------CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCH
T ss_pred --------HHhCCCccEEEECCCCCCCCh-------------hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCH
Confidence 001247999999999865321 112234556788999999999999999999998654
Q ss_pred cccHHHHHHHHHhCCCc
Q 006372 157 VENEAVVAEILRKCEGS 173 (648)
Q Consensus 157 ~ENEaVV~~~L~~~~g~ 173 (648)
.+...+|..++.+.+..
T Consensus 339 ~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 339 SQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp HHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHHHHcCCc
Confidence 55677888887776543
No 20
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.83 E-value=1.9e-08 Score=104.17 Aligned_cols=121 Identities=21% Similarity=0.284 Sum_probs=93.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
|||+.|+.+.++|.. +...|+|+|+|+..++.|++|+++++..+ +.+.+.|+..|+.
T Consensus 132 ~~aG~G~~~i~~a~~----------g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~------------ 189 (278)
T 3k6r_A 132 MFAGIGHLSLPIAVY----------GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG------------ 189 (278)
T ss_dssp TTCTTTTTTHHHHHH----------TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC------------
T ss_pred ecCcCcHHHHHHHHh----------cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc------------
Confidence 799999999998764 24589999999999999999999999865 8999999987642
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEE-eccc--CCc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY-STCS--MNP 156 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVY-STCS--l~p 156 (648)
...||+|++++|.++. ..|..|+++||+||.|.| ..+. ..+
T Consensus 190 ----------~~~~D~Vi~~~p~~~~--------------------------~~l~~a~~~lk~gG~ih~~~~~~e~~~~ 233 (278)
T 3k6r_A 190 ----------ENIADRILMGYVVRTH--------------------------EFIPKALSIAKDGAIIHYHNTVPEKLMP 233 (278)
T ss_dssp ----------CSCEEEEEECCCSSGG--------------------------GGHHHHHHHEEEEEEEEEEEEEEGGGTT
T ss_pred ----------ccCCCEEEECCCCcHH--------------------------HHHHHHHHHcCCCCEEEEEeeecccccc
Confidence 1569999999997642 136678999999999855 3332 334
Q ss_pred cccHHHHHHHHHhCCCceEEEeC
Q 006372 157 VENEAVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 157 ~ENEaVV~~~L~~~~g~veLvd~ 179 (648)
.+-.+.+..+.+..+..++.+.+
T Consensus 234 ~~~~e~i~~~~~~~g~~v~~~~~ 256 (278)
T 3k6r_A 234 REPFETFKRITKEYGYDVEKLNE 256 (278)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEEE
T ss_pred hhHHHHHHHHHHHcCCcEEEEEE
Confidence 45567788888888766665543
No 21
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.79 E-value=9.7e-09 Score=108.53 Aligned_cols=135 Identities=15% Similarity=0.116 Sum_probs=95.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc--EEEeecccccCCCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN--LIVTNHEAQHFPGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n--v~vtn~Da~~~p~~~~~~~~~~~~ 78 (648)
+||++|+.+.+++.. ...|+++|+|+..+..+++|+++++..+ +.+.+.|+..+....
T Consensus 160 lgcGtG~~sl~la~~-----------ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~--------- 219 (332)
T 2igt_A 160 LFGYTGVASLVAAAA-----------GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQRE--------- 219 (332)
T ss_dssp ETCTTCHHHHHHHHT-----------TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHH---------
T ss_pred cccccCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHH---------
Confidence 589999999998763 1289999999999999999999999874 888888876642100
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcE-EEEecccCCc-
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR-IVYSTCSMNP- 156 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~-LVYSTCSl~p- 156 (648)
......||.|++|+||.+.+.- .++ ......+.++|..++++|+|||. ++.++|+...
T Consensus 220 --------~~~~~~fD~Ii~dPP~~~~~~~---~~~---------~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~ 279 (332)
T 2igt_A 220 --------ERRGSTYDIILTDPPKFGRGTH---GEV---------WQLFDHLPLMLDICREILSPKALGLVLTAYSIRAS 279 (332)
T ss_dssp --------HHHTCCBSEEEECCCSEEECTT---CCE---------EEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSC
T ss_pred --------HhcCCCceEEEECCccccCCch---HHH---------HHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCC
Confidence 0002479999999999776521 112 12345567899999999999998 6667777643
Q ss_pred -cccHHHHHHHHHhCCCceE
Q 006372 157 -VENEAVVAEILRKCEGSVE 175 (648)
Q Consensus 157 -~ENEaVV~~~L~~~~g~ve 175 (648)
.+-+.++..++++.+..++
T Consensus 280 ~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 280 FYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp HHHHHHHHHHHTTTSCSEEE
T ss_pred HHHHHHHHHHHHHHcCCeEE
Confidence 2234445545545555444
No 22
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.78 E-value=8.6e-09 Score=100.87 Aligned_cols=106 Identities=12% Similarity=0.106 Sum_probs=83.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhC-----CCcEEEeecccccCCCcccCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC-----TANLIVTNHEAQHFPGCRANKNFS 75 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg-----~~nv~vtn~Da~~~p~~~~~~~~~ 75 (648)
+||++|+.|.++++.+. +.+.|+++|.++..+..+++++++++ ..++.+...|+...+.
T Consensus 84 iG~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-------- 147 (226)
T 1i1n_A 84 VGSGSGILTACFARMVG--------CTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-------- 147 (226)
T ss_dssp ETCTTSHHHHHHHHHHC--------TTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG--------
T ss_pred EcCCcCHHHHHHHHHhC--------CCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc--------
Confidence 48999999999998863 25799999999999999999999866 4678888887654210
Q ss_pred CCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 76 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 76 ~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
....||.|+++.+|. . ++..+.++|||||+||+++|+..
T Consensus 148 -------------~~~~fD~i~~~~~~~---------~-------------------~~~~~~~~LkpgG~lv~~~~~~~ 186 (226)
T 1i1n_A 148 -------------EEAPYDAIHVGAAAP---------V-------------------VPQALIDQLKPGGRLILPVGPAG 186 (226)
T ss_dssp -------------GGCCEEEEEECSBBS---------S-------------------CCHHHHHTEEEEEEEEEEESCTT
T ss_pred -------------cCCCcCEEEECCchH---------H-------------------HHHHHHHhcCCCcEEEEEEecCC
Confidence 124699999999981 1 23567899999999999999987
Q ss_pred ccccHHHH
Q 006372 156 PVENEAVV 163 (648)
Q Consensus 156 p~ENEaVV 163 (648)
+.++..++
T Consensus 187 ~~~~~~~~ 194 (226)
T 1i1n_A 187 GNQMLEQY 194 (226)
T ss_dssp SCEEEEEE
T ss_pred CceEEEEE
Confidence 77765443
No 23
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.77 E-value=6.5e-08 Score=98.31 Aligned_cols=135 Identities=13% Similarity=0.097 Sum_probs=98.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||++|..+..++..+ +.+.|+|+|+++..+...++++++++.+++.+...|.....
T Consensus 116 lG~GsG~~~~~la~~~---------~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~-------------- 172 (276)
T 2b3t_A 116 LGTGTGAIALALASER---------PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL-------------- 172 (276)
T ss_dssp ETCTTSHHHHHHHHHC---------TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG--------------
T ss_pred ecCCccHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhc--------------
Confidence 5899999999998764 35689999999999999999999999888888888764421
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcch----hhhhHHHHHHHHHHHhhccccCcEEEEecccCCc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGL----GNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~----~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p 156 (648)
....||.|++++||.+.+...-.++++. +.|.. ...-.....+++..+.++|||||++++.++..
T Consensus 173 --------~~~~fD~Iv~npPy~~~~~~~l~~~v~~-~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~-- 241 (276)
T 2b3t_A 173 --------AGQQFAMIVSNPPYIDEQDPHLQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ-- 241 (276)
T ss_dssp --------TTCCEEEEEECCCCBCTTCHHHHSSGGG-SSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS--
T ss_pred --------ccCCccEEEECCCCCCccccccChhhhh-cCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch--
Confidence 0146999999999998754211222221 12211 11122456889999999999999999986543
Q ss_pred cccHHHHHHHHHhCC
Q 006372 157 VENEAVVAEILRKCE 171 (648)
Q Consensus 157 ~ENEaVV~~~L~~~~ 171 (648)
+..-+..+|++.+
T Consensus 242 --~~~~~~~~l~~~G 254 (276)
T 2b3t_A 242 --QGEAVRQAFILAG 254 (276)
T ss_dssp --CHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHHCC
Confidence 4455777777765
No 24
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.75 E-value=3.9e-08 Score=103.86 Aligned_cols=119 Identities=24% Similarity=0.310 Sum_probs=95.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||++|..+..++.+.. +.+.|+++|+|+..++..++|+++.|..++.+.+.|+..++..
T Consensus 210 ~gcGsG~~~ie~a~~~~--------~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~------------ 269 (354)
T 3tma_A 210 PFTGSGTIALEAASTLG--------PTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF------------ 269 (354)
T ss_dssp SSCTTSHHHHHHHHHHC--------TTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT------------
T ss_pred CCCCcCHHHHHHHHhhC--------CCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc------------
Confidence 48999999999988752 2468999999999999999999999988899999998876421
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
...||.|++|+|+.- .......+..++..++..+.++|||||++++.|| |+
T Consensus 270 ---------~~~~D~Ii~npPyg~--------------r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~------~~ 320 (354)
T 3tma_A 270 ---------FPEVDRILANPPHGL--------------RLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL------RP 320 (354)
T ss_dssp ---------CCCCSEEEECCCSCC------------------CHHHHHHHHHHHHHHHHTSCTTCEEEEEES------CH
T ss_pred ---------cCCCCEEEECCCCcC--------------ccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC------CH
Confidence 134899999999821 1122345778899999999999999999999999 45
Q ss_pred HHHHHHHH
Q 006372 161 AVVAEILR 168 (648)
Q Consensus 161 aVV~~~L~ 168 (648)
..+..+++
T Consensus 321 ~~~~~~~~ 328 (354)
T 3tma_A 321 ALLKRALP 328 (354)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHhh
Confidence 66777766
No 25
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.69 E-value=1.9e-07 Score=91.43 Aligned_cols=142 Identities=15% Similarity=0.131 Sum_probs=93.6
Q ss_pred Cccc-chHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAA-PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAA-PGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||+ +|..+..++... .+.|+++|+++..+...++++++++. ++.+...|+..+..+.
T Consensus 62 lG~G~~G~~~~~la~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~---------- 120 (230)
T 3evz_A 62 IGTGHTAMMALMAEKFF----------NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGVV---------- 120 (230)
T ss_dssp ECCTTTCHHHHHHHHHH----------CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTTC----------
T ss_pred cCCCHHHHHHHHHHHhc----------CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhcc----------
Confidence 4788 999999998864 25899999999999999999999998 8888888865432110
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVEN 159 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~EN 159 (648)
...||.|++++|+...+.-...... ..|... ...+ ..-.++|..+.++|||||++++.+++- + +.
T Consensus 121 ----------~~~fD~I~~npp~~~~~~~~~~~~~-~~~~~~-~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~-~-~~ 185 (230)
T 3evz_A 121 ----------EGTFDVIFSAPPYYDKPLGRVLTER-EAIGGG-KYGE-EFSVKLLEEAFDHLNPGGKVALYLPDK-E-KL 185 (230)
T ss_dssp ----------CSCEEEEEECCCCC----------------CC-SSSC-HHHHHHHHHHGGGEEEEEEEEEEEESC-H-HH
T ss_pred ----------cCceeEEEECCCCcCCccccccChh-hhhccC-ccch-HHHHHHHHHHHHHhCCCeEEEEEeccc-H-hH
Confidence 1579999999998776653221111 111111 0111 223678999999999999999976543 2 44
Q ss_pred HHHHHHHHHhCCCceEEEe
Q 006372 160 EAVVAEILRKCEGSVELVD 178 (648)
Q Consensus 160 EaVV~~~L~~~~g~veLvd 178 (648)
..-+..+|++.+-.++.+.
T Consensus 186 ~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 186 LNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHcCCceEEEE
Confidence 5566677777764444443
No 26
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.67 E-value=1.3e-07 Score=95.26 Aligned_cols=135 Identities=14% Similarity=0.184 Sum_probs=89.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||++|..+..++... .+.|+|+|+++..+...++++++.+.. ++.+.+.|+..++..
T Consensus 56 lG~G~G~~~~~la~~~----------~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~----------- 114 (259)
T 3lpm_A 56 LCSGNGIIPLLLSTRT----------KAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL----------- 114 (259)
T ss_dssp TTCTTTHHHHHHHTTC----------CCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT-----------
T ss_pred cCCchhHHHHHHHHhc----------CCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh-----------
Confidence 5899999999887641 348999999999999999999999986 599999998775421
Q ss_pred cCcccccccccccccEEEEcCCCCCC-CccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGD-GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE 158 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGd-Gtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E 158 (648)
.....||.|++++|+... +.-.++++..+... ..........++..+.++|||||++++. .+.+
T Consensus 115 --------~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a---~~~~~~~~~~~l~~~~~~LkpgG~l~~~----~~~~ 179 (259)
T 3lpm_A 115 --------IPKERADIVTCNPPYFATPDTSLKNTNEHFRIA---RHEVMCTLEDTIRVAASLLKQGGKANFV----HRPE 179 (259)
T ss_dssp --------SCTTCEEEEEECCCC--------------------------HHHHHHHHHHHHHEEEEEEEEEE----ECTT
T ss_pred --------hccCCccEEEECCCCCCCccccCCCCchHHHhh---hccccCCHHHHHHHHHHHccCCcEEEEE----EcHH
Confidence 012579999999999776 33333443211111 0111123357899999999999999994 3445
Q ss_pred cHHHHHHHHHhCC
Q 006372 159 NEAVVAEILRKCE 171 (648)
Q Consensus 159 NEaVV~~~L~~~~ 171 (648)
...-+..++++.+
T Consensus 180 ~~~~~~~~l~~~~ 192 (259)
T 3lpm_A 180 RLLDIIDIMRKYR 192 (259)
T ss_dssp THHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCC
Confidence 5555666777765
No 27
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.66 E-value=8.9e-08 Score=93.48 Aligned_cols=117 Identities=17% Similarity=0.181 Sum_probs=92.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|..+.+++.. .+.|+++|+++..+...+++++++|.+ ++.+...|+.....
T Consensus 62 lGcG~G~~~~~la~~-----------~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~------------ 118 (204)
T 3njr_A 62 IGGGSGSVSVEWCLA-----------GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA------------ 118 (204)
T ss_dssp ETCTTCHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT------------
T ss_pred ecCCCCHHHHHHHHc-----------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc------------
Confidence 478899999988775 268999999999999999999999998 89999888765211
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVEN 159 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~EN 159 (648)
....||.|+++... . +. ++..+.++|||||+||+++|+. ++
T Consensus 119 ---------~~~~~D~v~~~~~~-------------------------~-~~-~l~~~~~~LkpgG~lv~~~~~~---~~ 159 (204)
T 3njr_A 119 ---------DLPLPEAVFIGGGG-------------------------S-QA-LYDRLWEWLAPGTRIVANAVTL---ES 159 (204)
T ss_dssp ---------TSCCCSEEEECSCC-------------------------C-HH-HHHHHHHHSCTTCEEEEEECSH---HH
T ss_pred ---------cCCCCCEEEECCcc-------------------------c-HH-HHHHHHHhcCCCcEEEEEecCc---cc
Confidence 01359999987521 0 22 7899999999999999999987 78
Q ss_pred HHHHHHHHHhCCCceEEEeC
Q 006372 160 EAVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 160 EaVV~~~L~~~~g~veLvd~ 179 (648)
...+..+|++.+..+.-+.+
T Consensus 160 ~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 160 ETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp HHHHHHHHHHHCSEEEEEEE
T ss_pred HHHHHHHHHhCCCcEEEEEe
Confidence 88888899887744444433
No 28
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.64 E-value=2.9e-07 Score=88.68 Aligned_cols=121 Identities=20% Similarity=0.175 Sum_probs=95.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|..+.+++... +.+.|+++|.++..+..+++++++++..++.+...|+.....
T Consensus 47 iG~G~G~~~~~la~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~------------- 104 (204)
T 3e05_A 47 IGAGSASVSIEASNLM---------PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD------------- 104 (204)
T ss_dssp ETCTTCHHHHHHHHHC---------TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-------------
T ss_pred ECCCCCHHHHHHHHHC---------CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-------------
Confidence 4789999999998762 357999999999999999999999999889998888754321
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
....||.|+++.+.. ....+|..+.++|||||++++++++. ++.
T Consensus 105 --------~~~~~D~i~~~~~~~-------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~ 148 (204)
T 3e05_A 105 --------DLPDPDRVFIGGSGG-------------------------MLEEIIDAVDRRLKSEGVIVLNAVTL---DTL 148 (204)
T ss_dssp --------TSCCCSEEEESCCTT-------------------------CHHHHHHHHHHHCCTTCEEEEEECBH---HHH
T ss_pred --------cCCCCCEEEECCCCc-------------------------CHHHHHHHHHHhcCCCeEEEEEeccc---ccH
Confidence 014599999987641 11367999999999999999998887 677
Q ss_pred HHHHHHHHhCCCceEEEeC
Q 006372 161 AVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 161 aVV~~~L~~~~g~veLvd~ 179 (648)
..+..+|++.+-.++++.+
T Consensus 149 ~~~~~~l~~~g~~~~~~~~ 167 (204)
T 3e05_A 149 TKAVEFLEDHGYMVEVACV 167 (204)
T ss_dssp HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHCCCceeEEEE
Confidence 7888888887644454443
No 29
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.61 E-value=4.2e-08 Score=95.28 Aligned_cols=121 Identities=15% Similarity=0.084 Sum_probs=82.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|||||+.|.++++. .+.|+|+|+++.. ..+++.++..|....+....
T Consensus 32 lG~G~G~~s~~la~~-----------~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~---------- 79 (191)
T 3dou_A 32 IGSSPGGWTQVLNSL-----------ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDD---------- 79 (191)
T ss_dssp ESCTTCHHHHHHTTT-----------CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHH----------
T ss_pred EeecCCHHHHHHHHc-----------CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHH----------
Confidence 599999999998764 3799999998752 24678888888765321000
Q ss_pred Ccccccccc---cccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcc
Q 006372 81 GIESESNMG---QLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 157 (648)
Q Consensus 81 ~~~~~~~~~---~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ 157 (648)
.. .... ...||.|++|+++...|.. .. +......++..+|..|.++|||||++|. .+...
T Consensus 80 --~~-~~~~~~~~~~~D~Vlsd~~~~~~g~~----------~~-d~~~~~~l~~~~l~~a~~~LkpGG~lv~---k~~~~ 142 (191)
T 3dou_A 80 --ID-RALREEGIEKVDDVVSDAMAKVSGIP----------SR-DHAVSYQIGQRVMEIAVRYLRNGGNVLL---KQFQG 142 (191)
T ss_dssp --HH-HHHHHHTCSSEEEEEECCCCCCCSCH----------HH-HHHHHHHHHHHHHHHHHHHEEEEEEEEE---EEECS
T ss_pred --HH-HHhhcccCCcceEEecCCCcCCCCCc----------cc-CHHHHHHHHHHHHHHHHHHccCCCEEEE---EEcCC
Confidence 00 0000 0379999999998777752 11 1223456788999999999999999984 44555
Q ss_pred ccHHHHHHHHHhC
Q 006372 158 ENEAVVAEILRKC 170 (648)
Q Consensus 158 ENEaVV~~~L~~~ 170 (648)
++...+.+.|++.
T Consensus 143 ~~~~~~~~~l~~~ 155 (191)
T 3dou_A 143 DMTNDFIAIWRKN 155 (191)
T ss_dssp THHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHh
Confidence 6666677777654
No 30
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.60 E-value=2.9e-07 Score=87.88 Aligned_cols=126 Identities=17% Similarity=0.209 Sum_probs=91.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|..+..++..+. +.+.|+++|.++..+...++++++.+. .++.+.+.|+..++...
T Consensus 29 lGcG~G~~~~~l~~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---------- 90 (197)
T 3eey_A 29 ATCGNGNDTAFLASLVG--------ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI---------- 90 (197)
T ss_dssp SCCTTSHHHHHHHHHHC--------TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC----------
T ss_pred cCCCCCHHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc----------
Confidence 58999999999988763 357999999999999999999999998 78999999987654210
Q ss_pred cCcccccccccccccEEEEcCCC--CCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPC--SGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 157 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPC--SGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ 157 (648)
...||.|++|+|- .+++.+ ......+.++|..+.++|||||+++.++++-.+.
T Consensus 91 ----------~~~fD~v~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~ 145 (197)
T 3eey_A 91 ----------DCPVKAVMFNLGYLPSGDHSI---------------STRPETTIQALSKAMELLVTGGIITVVIYYGGDT 145 (197)
T ss_dssp ----------CSCEEEEEEEESBCTTSCTTC---------------BCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTT
T ss_pred ----------cCCceEEEEcCCcccCccccc---------------ccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCC
Confidence 1569999999864 111111 1112245568999999999999999887654332
Q ss_pred --ccHHHHHHHHHh
Q 006372 158 --ENEAVVAEILRK 169 (648)
Q Consensus 158 --ENEaVV~~~L~~ 169 (648)
+....+..+++.
T Consensus 146 ~~~~~~~~~~~~~~ 159 (197)
T 3eey_A 146 GFEEKEKVLEFLKG 159 (197)
T ss_dssp BSHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHh
Confidence 223344555544
No 31
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.60 E-value=2.9e-07 Score=98.26 Aligned_cols=116 Identities=12% Similarity=0.149 Sum_probs=87.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc-CCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH-FPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~-~p~~~~~~~~~~~~~ 79 (648)
+| +.|.-+..++.. . +.+.|+++|+|+..+...+++++++|..++.+...|+.. +|..
T Consensus 179 lG-G~G~~~~~la~~-~--------~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~----------- 237 (373)
T 2qm3_A 179 LG-DDDLTSIALMLS-G--------LPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDY----------- 237 (373)
T ss_dssp ES-CTTCHHHHHHHH-T--------CCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTT-----------
T ss_pred EC-CCCHHHHHHHHh-C--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhh-----------
Confidence 36 788887777553 1 347999999999999999999999998789999998876 3310
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCc-EEEEecccCCccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG-RIVYSTCSMNPVE 158 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG-~LVYSTCSl~p~E 158 (648)
....||.|++|+||+.. . -..+|.++.++||||| .++|++|+ ..+
T Consensus 238 ---------~~~~fD~Vi~~~p~~~~-------------------~----~~~~l~~~~~~LkpgG~~~~~~~~~--~~~ 283 (373)
T 2qm3_A 238 ---------ALHKFDTFITDPPETLE-------------------A----IRAFVGRGIATLKGPRCAGYFGITR--RES 283 (373)
T ss_dssp ---------TSSCBSEEEECCCSSHH-------------------H----HHHHHHHHHHTBCSTTCEEEEEECT--TTC
T ss_pred ---------ccCCccEEEECCCCchH-------------------H----HHHHHHHHHHHcccCCeEEEEEEec--CcC
Confidence 01469999999998531 1 1778999999999999 55999987 234
Q ss_pred cH---HHHHHHHH-hCC
Q 006372 159 NE---AVVAEILR-KCE 171 (648)
Q Consensus 159 NE---aVV~~~L~-~~~ 171 (648)
+. ..|..++. +.+
T Consensus 284 ~~~~~~~~~~~l~~~~g 300 (373)
T 2qm3_A 284 SLDKWREIQKLLLNEFN 300 (373)
T ss_dssp CHHHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHHHhcC
Confidence 44 56677776 654
No 32
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.58 E-value=3.2e-07 Score=86.68 Aligned_cols=125 Identities=14% Similarity=0.070 Sum_probs=84.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|..|.+++.. .+.|+|+|.++..+...++++++.+..++.+.+.++..++..
T Consensus 29 iGcG~G~~~~~la~~-----------~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~------------ 85 (185)
T 3mti_A 29 ATMGNGNDTAFLAGL-----------SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHY------------ 85 (185)
T ss_dssp SCCTTSHHHHHHHTT-----------SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGT------------
T ss_pred EcCCCCHHHHHHHHh-----------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhh------------
Confidence 579999999988764 368999999999999999999999988888887665543211
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc---c
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP---V 157 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p---~ 157 (648)
....||.|+++.+. +. +...........+..+|..+.++|||||+++.+.++-++ .
T Consensus 86 --------~~~~fD~v~~~~~~-----~~--------~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 144 (185)
T 3mti_A 86 --------VREPIRAAIFNLGY-----LP--------SADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDM 144 (185)
T ss_dssp --------CCSCEEEEEEEEC------------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CH
T ss_pred --------ccCCcCEEEEeCCC-----CC--------CcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHH
Confidence 02569999988532 11 011122233456678899999999999999888776543 3
Q ss_pred ccHHHHHHHHHhC
Q 006372 158 ENEAVVAEILRKC 170 (648)
Q Consensus 158 ENEaVV~~~L~~~ 170 (648)
|.+.+. .+++..
T Consensus 145 ~~~~~~-~~~~~l 156 (185)
T 3mti_A 145 EKDAVL-EYVIGL 156 (185)
T ss_dssp HHHHHH-HHHHHS
T ss_pred HHHHHH-HHHHhC
Confidence 445544 445543
No 33
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.58 E-value=1.4e-07 Score=96.00 Aligned_cols=118 Identities=14% Similarity=0.274 Sum_probs=89.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh-CCCcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-CTANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl-g~~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||++|+.+.++++.+. +.+.|+++|.++.++...++++++. |..++.+...|+....
T Consensus 117 ~G~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~------------- 175 (275)
T 1yb2_A 117 VGVGSGNMSSYILYALN--------GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI------------- 175 (275)
T ss_dssp ECCTTSHHHHHHHHHHT--------TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC-------------
T ss_pred ecCCCCHHHHHHHHHcC--------CCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccC-------------
Confidence 48999999999998764 3579999999999999999999998 8888988888765410
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVEN 159 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~EN 159 (648)
....||.|++|+| ++ | .+|..+.++|||||+|++++|+.. .
T Consensus 176 ---------~~~~fD~Vi~~~~---------~~--~----------------~~l~~~~~~LkpgG~l~i~~~~~~---~ 216 (275)
T 1yb2_A 176 ---------SDQMYDAVIADIP---------DP--W----------------NHVQKIASMMKPGSVATFYLPNFD---Q 216 (275)
T ss_dssp ---------CSCCEEEEEECCS---------CG--G----------------GSHHHHHHTEEEEEEEEEEESSHH---H
T ss_pred ---------cCCCccEEEEcCc---------CH--H----------------HHHHHHHHHcCCCCEEEEEeCCHH---H
Confidence 0146999999876 11 1 468899999999999999999873 3
Q ss_pred HHHHHHHHHhCCCceEEEeCC
Q 006372 160 EAVVAEILRKCEGSVELVDVS 180 (648)
Q Consensus 160 EaVV~~~L~~~~g~veLvd~s 180 (648)
..-+...|++.+ +..+.+.
T Consensus 217 ~~~~~~~l~~~G--f~~~~~~ 235 (275)
T 1yb2_A 217 SEKTVLSLSASG--MHHLETV 235 (275)
T ss_dssp HHHHHHHSGGGT--EEEEEEE
T ss_pred HHHHHHHHHHCC--CeEEEEE
Confidence 333444555543 5555543
No 34
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.51 E-value=3.3e-07 Score=96.60 Aligned_cols=93 Identities=18% Similarity=0.253 Sum_probs=79.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||+.|+.+.+ +. . .+.|+|+|.++.-++.+++|++.++. .++.+.+.|+..++
T Consensus 202 lg~G~G~~~l~-a~--~---------~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~------------- 256 (336)
T 2yx1_A 202 MFAGVGPFSIA-CK--N---------AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD------------- 256 (336)
T ss_dssp TTCTTSHHHHH-TT--T---------SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-------------
T ss_pred ccCccCHHHHh-cc--C---------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-------------
Confidence 68999999987 65 2 36899999999999999999999998 57999998876642
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
..||.|++|+|..+. .++..++++|++||+|+|++|+-.
T Consensus 257 -----------~~fD~Vi~dpP~~~~--------------------------~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 257 -----------VKGNRVIMNLPKFAH--------------------------KFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp -----------CCEEEEEECCTTTGG--------------------------GGHHHHHHHEEEEEEEEEEEEESS
T ss_pred -----------CCCcEEEECCcHhHH--------------------------HHHHHHHHHcCCCCEEEEEEeecC
Confidence 359999999996431 568889999999999999999987
No 35
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.50 E-value=3.2e-07 Score=92.06 Aligned_cols=104 Identities=10% Similarity=0.079 Sum_probs=80.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||++|..|.+|++.+. +.+.|+++|+++..+...++++++.|.. ++.+...|+..+....
T Consensus 70 iG~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~---------- 131 (248)
T 3tfw_A 70 IGTLGGYSTIWMARELP--------ADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESL---------- 131 (248)
T ss_dssp ECCTTSHHHHHHHTTSC--------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTC----------
T ss_pred ecCCchHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhc----------
Confidence 47899999999987642 2589999999999999999999999986 7999988886531100
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
.....||.|++|+++.. ....|..+.++|||||+||+..+...
T Consensus 132 --------~~~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 132 --------GECPAFDLIFIDADKPN-------------------------NPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp --------CSCCCCSEEEECSCGGG-------------------------HHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred --------CCCCCeEEEEECCchHH-------------------------HHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 01147999999986211 12368889999999999999888764
No 36
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.50 E-value=1.6e-07 Score=96.91 Aligned_cols=126 Identities=10% Similarity=0.101 Sum_probs=91.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+|+++|..+..++.. . ...|+|+|+|+..+...++|+++++..+ +.+...|+....
T Consensus 130 lG~GsG~~~~~la~~-~---------~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~------------- 186 (284)
T 1nv8_A 130 IGTGSGAIGVSVAKF-S---------DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF------------- 186 (284)
T ss_dssp ESCTTSHHHHHHHHH-S---------SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG-------------
T ss_pred EeCchhHHHHHHHHC-C---------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc-------------
Confidence 589999999999876 2 4689999999999999999999999875 888888765420
Q ss_pred cCcccccccccccc---cEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHh-hccccCcEEEEecccCC
Q 006372 80 KGIESESNMGQLLF---DRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGI-SLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 80 ~~~~~~~~~~~~~F---DrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al-~lLk~GG~LVYSTCSl~ 155 (648)
...| |.|+++|||.+.+. ...+++. |.|.....-..-...++.+.+ +.|+|||.|+. .+.
T Consensus 187 ----------~~~f~~~D~IvsnPPyi~~~~-~l~~~v~--~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~---e~~ 250 (284)
T 1nv8_A 187 ----------KEKFASIEMILSNPPYVKSSA-HLPKDVL--FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM---EIG 250 (284)
T ss_dssp ----------GGGTTTCCEEEECCCCBCGGG-SCTTSCC--CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE---ECC
T ss_pred ----------ccccCCCCEEEEcCCCCCccc-ccChhhc--cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE---EEC
Confidence 0347 99999999999886 4445543 444321110011126788888 99999999996 355
Q ss_pred ccccHHHHHH
Q 006372 156 PVENEAVVAE 165 (648)
Q Consensus 156 p~ENEaVV~~ 165 (648)
..+.++|.+.
T Consensus 251 ~~q~~~v~~~ 260 (284)
T 1nv8_A 251 EDQVEELKKI 260 (284)
T ss_dssp TTCHHHHTTT
T ss_pred chHHHHHHHH
Confidence 5566665543
No 37
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.49 E-value=5.2e-07 Score=94.95 Aligned_cols=139 Identities=12% Similarity=0.088 Sum_probs=98.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
.||++|+.+..+++.+.... .....|+++|+++..+...+.++...|. ++.+.+.|+....
T Consensus 137 p~cGsG~~l~~~~~~~~~~~----~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~-------------- 197 (344)
T 2f8l_A 137 PACGTANLLTTVINQLELKG----DVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL-------------- 197 (344)
T ss_dssp TTCTTSHHHHHHHHHHHTTS----SCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC--------------
T ss_pred CCCCccHHHHHHHHHHHHhc----CCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc--------------
Confidence 48999999999998875310 0137899999999999999999988887 5677777754311
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc-cCCcccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC-SMNPVEN 159 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC-Sl~p~EN 159 (648)
....||.|+++||.+ .+. ..+.+.+|.+....++...+..++.+++++||+||++++.+. ++.-...
T Consensus 198 --------~~~~fD~Ii~NPPfg---~~~-~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~ 265 (344)
T 2f8l_A 198 --------LVDPVDVVISDLPVG---YYP-DDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSD 265 (344)
T ss_dssp --------CCCCEEEEEEECCCS---EES-CHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTT
T ss_pred --------ccCCccEEEECCCCC---CcC-chhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCch
Confidence 015699999999983 332 334455555543334556788899999999999999999873 3333344
Q ss_pred HHHHHHHHHhC
Q 006372 160 EAVVAEILRKC 170 (648)
Q Consensus 160 EaVV~~~L~~~ 170 (648)
+.-+...|.+.
T Consensus 266 ~~~ir~~l~~~ 276 (344)
T 2f8l_A 266 FAKVDKFIKKN 276 (344)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 55555555543
No 38
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.48 E-value=5.8e-07 Score=83.78 Aligned_cols=120 Identities=15% Similarity=0.234 Sum_probs=90.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeeccccc-CCCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQH-FPGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~-~p~~~~~~~~~~~~ 78 (648)
++|++|.-+.+++... +.+.|+++|.++..+...++++++++.+ ++ ++..|+.. ++.
T Consensus 32 iG~G~G~~~~~l~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~----------- 90 (178)
T 3hm2_A 32 IGGGSGSIAIEWLRST---------PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDD----------- 90 (178)
T ss_dssp ESTTTTHHHHHHHTTS---------SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGG-----------
T ss_pred eCCCCCHHHHHHHHHC---------CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhc-----------
Confidence 4788999998887653 3589999999999999999999999987 78 66666532 110
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE 158 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E 158 (648)
....||.|++..+.. + ..+|..+.++|||||++++++++. +
T Consensus 91 ----------~~~~~D~i~~~~~~~--------------~------------~~~l~~~~~~L~~gG~l~~~~~~~---~ 131 (178)
T 3hm2_A 91 ----------VPDNPDVIFIGGGLT--------------A------------PGVFAAAWKRLPVGGRLVANAVTV---E 131 (178)
T ss_dssp ----------CCSCCSEEEECC-TT--------------C------------TTHHHHHHHTCCTTCEEEEEECSH---H
T ss_pred ----------cCCCCCEEEECCccc--------------H------------HHHHHHHHHhcCCCCEEEEEeecc---c
Confidence 015699999765421 0 456888999999999999999887 7
Q ss_pred cHHHHHHHHHhCCCceEEEeCC
Q 006372 159 NEAVVAEILRKCEGSVELVDVS 180 (648)
Q Consensus 159 NEaVV~~~L~~~~g~veLvd~s 180 (648)
+...+..++++.+..+.-+.++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~ 153 (178)
T 3hm2_A 132 SEQMLWALRKQFGGTISSFAIS 153 (178)
T ss_dssp HHHHHHHHHHHHCCEEEEEEEE
T ss_pred cHHHHHHHHHHcCCeeEEEEee
Confidence 7778888888877555554444
No 39
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.48 E-value=4.5e-07 Score=88.84 Aligned_cols=127 Identities=11% Similarity=0.113 Sum_probs=89.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCC-CcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFP-GCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p-~~~~~~~~~~~~ 78 (648)
+||++|..|.++++.+. +.+.|+++|.++..+...++++++++.. ++.+...|+..+. .+.
T Consensus 65 iG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~--------- 127 (221)
T 3u81_A 65 LGAYCGYSAVRMARLLQ--------PGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLK--------- 127 (221)
T ss_dssp ECCTTSHHHHHHHTTSC--------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTT---------
T ss_pred ECCCCCHHHHHHHHhCC--------CCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHH---------
Confidence 47999999999988653 2579999999999999999999999986 5999999876532 110
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE 158 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E 158 (648)
.......||.|++|+++.. ..-..+++... ++|||||+||+++|...
T Consensus 128 -------~~~~~~~fD~V~~d~~~~~----------------------~~~~~~~~~~~-~~LkpgG~lv~~~~~~~--- 174 (221)
T 3u81_A 128 -------KKYDVDTLDMVFLDHWKDR----------------------YLPDTLLLEKC-GLLRKGTVLLADNVIVP--- 174 (221)
T ss_dssp -------TTSCCCCCSEEEECSCGGG----------------------HHHHHHHHHHT-TCCCTTCEEEESCCCCC---
T ss_pred -------HhcCCCceEEEEEcCCccc----------------------chHHHHHHHhc-cccCCCeEEEEeCCCCc---
Confidence 0001157999999975311 11223456665 99999999999999863
Q ss_pred cHHHHHHHHHhCCCceEEEe
Q 006372 159 NEAVVAEILRKCEGSVELVD 178 (648)
Q Consensus 159 NEaVV~~~L~~~~g~veLvd 178 (648)
+.....+++++++ .++...
T Consensus 175 ~~~~~~~~l~~~~-~~~~~~ 193 (221)
T 3u81_A 175 GTPDFLAYVRGSS-SFECTH 193 (221)
T ss_dssp CCHHHHHHHHHCT-TEEEEE
T ss_pred chHHHHHHHhhCC-CceEEE
Confidence 3344455666655 355443
No 40
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.46 E-value=1.1e-07 Score=101.56 Aligned_cols=110 Identities=14% Similarity=0.157 Sum_probs=76.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||+.|+.|..++.. .+.|+|+|.++.-++..++|+++.|..|+.+.+.|+..+......... .
T Consensus 220 l~cG~G~~~l~la~~-----------~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~-~---- 283 (369)
T 3bt7_A 220 LYCGNGNFSLALARN-----------FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVRE-F---- 283 (369)
T ss_dssp ESCTTSHHHHHHGGG-----------SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCC-C----
T ss_pred ccCCCCHHHHHHHhc-----------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccc-c----
Confidence 589999999987652 358999999999999999999999998999999888664210000000 0
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
............||.|++|||..|. ...++++|++||+|||.+|+-
T Consensus 284 ~~l~~~~~~~~~fD~Vv~dPPr~g~----------------------------~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 284 NRLQGIDLKSYQCETIFVDPPRSGL----------------------------DSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp TTGGGSCGGGCCEEEEEECCCTTCC----------------------------CHHHHHHHTTSSEEEEEESCH
T ss_pred ccccccccccCCCCEEEECcCcccc----------------------------HHHHHHHHhCCCEEEEEECCH
Confidence 0000000011369999999998741 234566677999999999964
No 41
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.45 E-value=3.8e-07 Score=89.84 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=80.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||++|..+.++++.+ +.+.|+++|.++.++...+++++++|.. ++.+...|+..+...
T Consensus 61 iG~G~G~~~~~la~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----------- 120 (233)
T 2gpy_A 61 IGTAIGYSAIRMAQAL---------PEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEK----------- 120 (233)
T ss_dssp ECCTTSHHHHHHHHHC---------TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHH-----------
T ss_pred ecCCCcHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh-----------
Confidence 4789999999998874 3479999999999999999999999985 588888887653100
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
......||.|++|++|+ .+..+|..+.++|+|||+||++++..
T Consensus 121 -------~~~~~~fD~I~~~~~~~-------------------------~~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 121 -------LELYPLFDVLFIDAAKG-------------------------QYRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp -------HTTSCCEEEEEEEGGGS-------------------------CHHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred -------cccCCCccEEEECCCHH-------------------------HHHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 00014699999999864 23567899999999999999997654
No 42
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.44 E-value=1.4e-07 Score=97.91 Aligned_cols=129 Identities=12% Similarity=-0.008 Sum_probs=91.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh----CCCcEEEeecccccCCCcccCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGCRANKNFSS 76 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl----g~~nv~vtn~Da~~~p~~~~~~~~~~ 76 (648)
+|+++|+.+..++... +.+.|+++|+|+..++..++++.++ +.+++.+...|+..+...
T Consensus 97 iG~G~G~~~~~l~~~~---------~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-------- 159 (296)
T 1inl_A 97 IGGGDGGTLREVLKHD---------SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK-------- 159 (296)
T ss_dssp EECTTCHHHHHHTTST---------TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG--------
T ss_pred EcCCcCHHHHHHHhcC---------CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh--------
Confidence 4789999988886532 2468999999999999999988653 346899999988664210
Q ss_pred CCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc--C
Q 006372 77 ASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS--M 154 (648)
Q Consensus 77 ~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS--l 154 (648)
....||.|++|+|+.+.|.. .+-.+.+++..+.++|+|||+||+.+|| +
T Consensus 160 ------------~~~~fD~Ii~d~~~~~~~~~-----------------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 210 (296)
T 1inl_A 160 ------------FKNEFDVIIIDSTDPTAGQG-----------------GHLFTEEFYQACYDALKEDGVFSAETEDPFY 210 (296)
T ss_dssp ------------CSSCEEEEEEEC---------------------------CCSHHHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred ------------CCCCceEEEEcCCCcccCch-----------------hhhhHHHHHHHHHHhcCCCcEEEEEccCccc
Confidence 02569999999987423310 0113467889999999999999999998 6
Q ss_pred CccccHHHHHHHHHhCCCceEE
Q 006372 155 NPVENEAVVAEILRKCEGSVEL 176 (648)
Q Consensus 155 ~p~ENEaVV~~~L~~~~g~veL 176 (648)
++.+...+++.+.+.++ .+.+
T Consensus 211 ~~~~~~~~~~~l~~~F~-~v~~ 231 (296)
T 1inl_A 211 DIGWFKLAYRRISKVFP-ITRV 231 (296)
T ss_dssp THHHHHHHHHHHHHHCS-EEEE
T ss_pred CHHHHHHHHHHHHHHCC-ceEE
Confidence 67778888887776654 3444
No 43
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.43 E-value=5.4e-07 Score=92.08 Aligned_cols=97 Identities=20% Similarity=0.134 Sum_probs=77.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||++|+.|..++... +.+.|+|+|.++..++.+++++++.+..++.+.+.|+..++.
T Consensus 126 lgcG~G~~s~~la~~~---------~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~------------- 183 (272)
T 3a27_A 126 MFAGIGYFTIPLAKYS---------KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL------------- 183 (272)
T ss_dssp TTCTTTTTHHHHHHHT---------CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-------------
T ss_pred ecCcCCHHHHHHHHhC---------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-------------
Confidence 5899999999998763 246899999999999999999999999999999998876521
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
...||.|++|+|. + . .++|..+++.|+|||+|+. +|...
T Consensus 184 ---------~~~~D~Vi~d~p~---~-------~----------------~~~l~~~~~~LkpgG~l~~-s~~~~ 222 (272)
T 3a27_A 184 ---------KDVADRVIMGYVH---K-------T----------------HKFLDKTFEFLKDRGVIHY-HETVA 222 (272)
T ss_dssp ---------TTCEEEEEECCCS---S-------G----------------GGGHHHHHHHEEEEEEEEE-EEEEE
T ss_pred ---------cCCceEEEECCcc---c-------H----------------HHHHHHHHHHcCCCCEEEE-EEcCc
Confidence 1469999999984 1 0 1357888999999988775 45443
No 44
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.43 E-value=4.5e-07 Score=90.49 Aligned_cols=106 Identities=15% Similarity=0.141 Sum_probs=81.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCC-CcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFP-GCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p-~~~~~~~~~~~~ 78 (648)
+|+++|..|..+++.+. +.+.|+++|+++..+...++++++.|.. ++.+...|+..+. .+..
T Consensus 77 iG~G~G~~~~~la~~~~--------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~-------- 140 (237)
T 3c3y_A 77 VGVFTGYSLLLTALSIP--------DDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQ-------- 140 (237)
T ss_dssp ECCTTSHHHHHHHHHSC--------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH--------
T ss_pred eCCCCCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh--------
Confidence 47899999999998763 2589999999999999999999999986 5888888876531 1100
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
.......||.|++|++|+ .+..++..+.++|+|||+||+.+|..
T Consensus 141 -------~~~~~~~fD~I~~d~~~~-------------------------~~~~~l~~~~~~L~pGG~lv~d~~~~ 184 (237)
T 3c3y_A 141 -------GQESEGSYDFGFVDADKP-------------------------NYIKYHERLMKLVKVGGIVAYDNTLW 184 (237)
T ss_dssp -------STTCTTCEEEEEECSCGG-------------------------GHHHHHHHHHHHEEEEEEEEEECTTG
T ss_pred -------ccCCCCCcCEEEECCchH-------------------------HHHHHHHHHHHhcCCCeEEEEecCCc
Confidence 000025799999997642 12467888999999999999998754
No 45
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.41 E-value=1.2e-06 Score=88.84 Aligned_cols=118 Identities=15% Similarity=0.111 Sum_probs=88.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||++|..+..++..+. +.+.|+++|.++..+..+++++++++. .++.+...|+..+ +
T Consensus 119 iG~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~--------- 177 (277)
T 1o54_A 119 TGVGSGAMCAVLARAVG--------SSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG----F--------- 177 (277)
T ss_dssp ECCTTSHHHHHHHHHTT--------TTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC----C---------
T ss_pred ECCcCCHHHHHHHHHhC--------CCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc----c---------
Confidence 47899999999988753 357999999999999999999999987 6788888876543 0
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVEN 159 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~EN 159 (648)
....||.|++|+|+. ..+|..+.++|+|||+|++.+++.. .
T Consensus 178 ---------~~~~~D~V~~~~~~~---------------------------~~~l~~~~~~L~pgG~l~~~~~~~~---~ 218 (277)
T 1o54_A 178 ---------DEKDVDALFLDVPDP---------------------------WNYIDKCWEALKGGGRFATVCPTTN---Q 218 (277)
T ss_dssp ---------SCCSEEEEEECCSCG---------------------------GGTHHHHHHHEEEEEEEEEEESSHH---H
T ss_pred ---------cCCccCEEEECCcCH---------------------------HHHHHHHHHHcCCCCEEEEEeCCHH---H
Confidence 014699999998732 1457888999999999999988763 2
Q ss_pred HHHHHHHHHhCCCceEEEeCC
Q 006372 160 EAVVAEILRKCEGSVELVDVS 180 (648)
Q Consensus 160 EaVV~~~L~~~~g~veLvd~s 180 (648)
-.-+..+|++.+ +..+.+.
T Consensus 219 ~~~~~~~l~~~g--f~~~~~~ 237 (277)
T 1o54_A 219 VQETLKKLQELP--FIRIEVW 237 (277)
T ss_dssp HHHHHHHHHHSS--EEEEEEE
T ss_pred HHHHHHHHHHCC--CceeEEE
Confidence 233445566543 5555443
No 46
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.40 E-value=7.5e-07 Score=86.80 Aligned_cols=106 Identities=14% Similarity=0.069 Sum_probs=80.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|+.|.++++.+. +.+.|+++|+++..+...++++++.|..+ +.+...|+..+....
T Consensus 65 iG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---------- 126 (223)
T 3duw_A 65 IGTLGGYSTIWLARGLS--------SGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQI---------- 126 (223)
T ss_dssp ECCTTSHHHHHHHTTCC--------SSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHH----------
T ss_pred ecCCccHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH----------
Confidence 47899999999987642 15799999999999999999999999865 888888875431100
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
.......||.|++|++++ ....++..+.++|+|||+||...+...
T Consensus 127 ------~~~~~~~fD~v~~d~~~~-------------------------~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 127 ------ENEKYEPFDFIFIDADKQ-------------------------NNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp ------HHTTCCCCSEEEECSCGG-------------------------GHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred ------HhcCCCCcCEEEEcCCcH-------------------------HHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 000014699999998743 113578899999999999998776653
No 47
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.39 E-value=1.1e-06 Score=86.75 Aligned_cols=76 Identities=18% Similarity=0.131 Sum_probs=64.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||++|+.+.+++.. .+.|+|+|+++..+..+++++++++. .++.+.+.|+..++.
T Consensus 85 ~gcG~G~~~~~la~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------------ 141 (241)
T 3gdh_A 85 AFCGVGGNTIQFALT-----------GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS------------ 141 (241)
T ss_dssp TTCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG------------
T ss_pred CccccCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc------------
Confidence 589999999999774 26899999999999999999999998 689999998866431
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLR 109 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlr 109 (648)
...||.|++|+||.+.+...
T Consensus 142 ----------~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 142 ----------FLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp ----------GCCCSEEEECCCCSSGGGGG
T ss_pred ----------cCCCCEEEECCCcCCcchhh
Confidence 25799999999999876543
No 48
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.37 E-value=3.2e-06 Score=83.71 Aligned_cols=98 Identities=12% Similarity=0.059 Sum_probs=78.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh-CCCcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-CTANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl-g~~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|..+.+++..+. +.+.|+++|.++..+..+++++++. |..++.+...|+..++.
T Consensus 103 iG~G~G~~~~~l~~~~~--------~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~------------ 162 (258)
T 2pwy_A 103 AGTGSGGLTLFLARAVG--------EKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAEL------------ 162 (258)
T ss_dssp ECCTTSHHHHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCC------------
T ss_pred ECCCcCHHHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC------------
Confidence 36889999999988763 3579999999999999999999988 87788888888765421
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++|+|. . ..+|.++.++|+|||+++.++.+.
T Consensus 163 ---------~~~~~D~v~~~~~~-----------~----------------~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 163 ---------EEAAYDGVALDLME-----------P----------------WKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp ---------CTTCEEEEEEESSC-----------G----------------GGGHHHHHHHEEEEEEEEEEESCH
T ss_pred ---------CCCCcCEEEECCcC-----------H----------------HHHHHHHHHhCCCCCEEEEEeCCH
Confidence 01469999998762 1 145888999999999999887655
No 49
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.35 E-value=1e-06 Score=87.66 Aligned_cols=111 Identities=20% Similarity=0.221 Sum_probs=84.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|..+.+++..+. +.+.|+++|.++..+...++++++.|.++ +.+...|+....
T Consensus 100 iG~G~G~~~~~l~~~~~--------~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------- 158 (255)
T 3mb5_A 100 AGVGSGALTLFLANIVG--------PEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI------------- 158 (255)
T ss_dssp ECCTTSHHHHHHHHHHC--------TTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC-------------
T ss_pred ecCCchHHHHHHHHHhC--------CCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc-------------
Confidence 37899999999998864 35799999999999999999999999877 888888876420
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVEN 159 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~EN 159 (648)
....||.|++|+|+. ..+|.++.++|+|||+++..+-+. +.
T Consensus 159 ---------~~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L~~gG~l~~~~~~~---~~ 199 (255)
T 3mb5_A 159 ---------EEENVDHVILDLPQP---------------------------ERVVEHAAKALKPGGFFVAYTPCS---NQ 199 (255)
T ss_dssp ---------CCCSEEEEEECSSCG---------------------------GGGHHHHHHHEEEEEEEEEEESSH---HH
T ss_pred ---------CCCCcCEEEECCCCH---------------------------HHHHHHHHHHcCCCCEEEEEECCH---HH
Confidence 014699999998731 135888999999999998654222 34
Q ss_pred HHHHHHHHHhCC
Q 006372 160 EAVVAEILRKCE 171 (648)
Q Consensus 160 EaVV~~~L~~~~ 171 (648)
..-+...|++.+
T Consensus 200 ~~~~~~~l~~~g 211 (255)
T 3mb5_A 200 VMRLHEKLREFK 211 (255)
T ss_dssp HHHHHHHHHHTG
T ss_pred HHHHHHHHHHcC
Confidence 445566677664
No 50
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.35 E-value=1.7e-06 Score=83.20 Aligned_cols=116 Identities=16% Similarity=0.178 Sum_probs=85.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||++|..+..++.. +.+.|+++|+++..+..+++++++.+. ++.+.+.|+..++
T Consensus 56 ~g~G~G~~~~~l~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~-------------- 110 (207)
T 1wy7_A 56 LGAGTGVLSYGALLL----------GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN-------------- 110 (207)
T ss_dssp ETCTTCHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC--------------
T ss_pred eeCCCCHHHHHHHHc----------CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC--------------
Confidence 479999999888664 134899999999999999999988887 7888888876542
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
..||.|++|+|+.-.. + .....+|.++++++ || +|+.|. .+.++.
T Consensus 111 ----------~~~D~v~~~~p~~~~~---~-----------------~~~~~~l~~~~~~l--~~--~~~~~~-~~~~~~ 155 (207)
T 1wy7_A 111 ----------SRVDIVIMNPPFGSQR---K-----------------HADRPFLLKAFEIS--DV--VYSIHL-AKPEVR 155 (207)
T ss_dssp ----------CCCSEEEECCCCSSSS---T-----------------TTTHHHHHHHHHHC--SE--EEEEEE-CCHHHH
T ss_pred ----------CCCCEEEEcCCCcccc---C-----------------CchHHHHHHHHHhc--Cc--EEEEEe-CCcCCH
Confidence 3599999999963211 1 11245678888887 43 788883 345778
Q ss_pred HHHHHHHHhCCCceEE
Q 006372 161 AVVAEILRKCEGSVEL 176 (648)
Q Consensus 161 aVV~~~L~~~~g~veL 176 (648)
+.+..+|++.+..++.
T Consensus 156 ~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 156 RFIEKFSWEHGFVVTH 171 (207)
T ss_dssp HHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHCCCeEEE
Confidence 8888888887644443
No 51
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.33 E-value=2.8e-07 Score=88.02 Aligned_cols=138 Identities=13% Similarity=0.129 Sum_probs=69.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||++|..+.+++... +.+.|+++|+++..+...++++...+. ++.+...|+..... .
T Consensus 37 iG~G~G~~~~~l~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~----~-------- 94 (215)
T 4dzr_A 37 VGTGSGCIAVSIALAC---------PGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLI----E-------- 94 (215)
T ss_dssp EESSBCHHHHHHHHHC---------TTEEEEEEECC--------------------CCHHHHHHHHH----H--------
T ss_pred ecCCHhHHHHHHHHhC---------CCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhh----h--------
Confidence 4799999999998863 357999999999999999999988877 77777777654100 0
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcch----hhhhHHHHHHHHHHHhhccccCcEEEEecccCCc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGL----GNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~----~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p 156 (648)
.......||.|++|+|+...+.+..-+.....+.+.. ...-......++.++.++|||||++++..+..
T Consensus 95 -----~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-- 167 (215)
T 4dzr_A 95 -----RAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH-- 167 (215)
T ss_dssp -----HHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT--
T ss_pred -----hhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC--
Confidence 0001257999999999987776543222211111111 01111233678999999999999966555553
Q ss_pred cccHHHHHHHHH
Q 006372 157 VENEAVVAEILR 168 (648)
Q Consensus 157 ~ENEaVV~~~L~ 168 (648)
....-+..+++
T Consensus 168 -~~~~~~~~~l~ 178 (215)
T 4dzr_A 168 -NQADEVARLFA 178 (215)
T ss_dssp -SCHHHHHHHTG
T ss_pred -ccHHHHHHHHH
Confidence 44555666666
No 52
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.28 E-value=1.7e-06 Score=83.86 Aligned_cols=103 Identities=22% Similarity=0.101 Sum_probs=77.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC--CcEEEeecccccCCCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT--ANLIVTNHEAQHFPGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~--~nv~vtn~Da~~~p~~~~~~~~~~~~ 78 (648)
+||++|..+..++.. ..+.|+++|.|+..++.+++++++.+. .++.+.+.|+..++..
T Consensus 60 lGcGtG~~~~~~~~~----------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~---------- 119 (201)
T 2ift_A 60 GFAGSGSLGFEALSR----------QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQ---------- 119 (201)
T ss_dssp TTCTTCHHHHHHHHT----------TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTS----------
T ss_pred cCCccCHHHHHHHHc----------cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHh----------
Confidence 589999999876553 135899999999999999999999998 6899998887664210
Q ss_pred CcCccccccccccc-ccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHH--hhccccCcEEEEecccCC
Q 006372 79 DKGIESESNMGQLL-FDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRG--ISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 79 ~~~~~~~~~~~~~~-FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~A--l~lLk~GG~LVYSTCSl~ 155 (648)
..... ||.|++|+|.. .+. ...+|... .++|||||+|++++|+..
T Consensus 120 ---------~~~~~~fD~I~~~~~~~-~~~----------------------~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 120 ---------PQNQPHFDVVFLDPPFH-FNL----------------------AEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp ---------CCSSCCEEEEEECCCSS-SCH----------------------HHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred ---------hccCCCCCEEEECCCCC-Ccc----------------------HHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 00256 99999999942 110 01234444 678999999999999875
No 53
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.27 E-value=1.9e-06 Score=85.42 Aligned_cols=102 Identities=12% Similarity=0.094 Sum_probs=80.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC--cEEEeecccccCCCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQHFPGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~--nv~vtn~Da~~~p~~~~~~~~~~~~ 78 (648)
+++++|..|..|++.+. +.|.|+++|.++..+...++++++.|.. ++.+...|+..+...
T Consensus 63 iG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~---------- 124 (221)
T 3dr5_A 63 ITPAAGLVGLYILNGLA--------DNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSR---------- 124 (221)
T ss_dssp ESTTHHHHHHHHHHHSC--------TTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGG----------
T ss_pred EcCCchHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHH----------
Confidence 37899999999988753 2589999999999999999999999986 799999888664210
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
.....||.|++|++.. . ...++..++++|||||+||...+..
T Consensus 125 ---------~~~~~fD~V~~d~~~~-------------~------------~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 125 ---------LANDSYQLVFGQVSPM-------------D------------LKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp ---------SCTTCEEEEEECCCTT-------------T------------HHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred ---------hcCCCcCeEEEcCcHH-------------H------------HHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 0025799999997511 0 1246888999999999999988875
No 54
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.26 E-value=3.3e-06 Score=83.00 Aligned_cols=124 Identities=18% Similarity=0.229 Sum_probs=81.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|||+|..|.+++..+. .|.|+|+|.++..+..+.+..++. .|+.....|+.......
T Consensus 64 lGcGtG~~~~~la~~~~---------~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~----------- 121 (210)
T 1nt2_A 64 LGAASGTTVSHLADIVD---------EGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYS----------- 121 (210)
T ss_dssp ETCTTSHHHHHHHHHTT---------TSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTT-----------
T ss_pred ECCcCCHHHHHHHHHcC---------CCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhc-----------
Confidence 48999999999988752 479999999999887777766654 46777777765421000
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHH-HHHHHHhhccccCcEEEEec---ccCCc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQV-QIAMRGISLLKVGGRIVYST---CSMNP 156 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~-~IL~~Al~lLk~GG~LVYST---CSl~p 156 (648)
.. ...||.|++|++ .+ .|. .+|..+.++|||||+++++. |.-..
T Consensus 122 ------~~-~~~fD~V~~~~~---------~~----------------~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~ 169 (210)
T 1nt2_A 122 ------GI-VEKVDLIYQDIA---------QK----------------NQIEILKANAEFFLKEKGEVVIMVKARSIDST 169 (210)
T ss_dssp ------TT-CCCEEEEEECCC---------ST----------------THHHHHHHHHHHHEEEEEEEEEEEEHHHHCTT
T ss_pred ------cc-ccceeEEEEecc---------Ch----------------hHHHHHHHHHHHHhCCCCEEEEEEecCCcccc
Confidence 00 156999999842 11 123 34888999999999999984 32223
Q ss_pred cccHHHHHHH---HHhCCCceEEEeCCC
Q 006372 157 VENEAVVAEI---LRKCEGSVELVDVSN 181 (648)
Q Consensus 157 ~ENEaVV~~~---L~~~~g~veLvd~s~ 181 (648)
...+++.... |++. ++++....
T Consensus 170 ~~~~~~~~~~~~~l~~~---f~~~~~~~ 194 (210)
T 1nt2_A 170 AEPEEVFKSVLKEMEGD---FKIVKHGS 194 (210)
T ss_dssp SCHHHHHHHHHHHHHTT---SEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhh---cEEeeeec
Confidence 3445554222 5653 66665443
No 55
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.26 E-value=3.8e-06 Score=83.13 Aligned_cols=99 Identities=12% Similarity=0.073 Sum_probs=77.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCC-cccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPG-CRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~-~~~~~~~~~~~ 78 (648)
++|+.|..|..++... +.+.|+++|+++..+...++++++.+.. ++.+...|+..+.. .
T Consensus 78 iG~G~G~~~~~la~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---------- 138 (232)
T 3ntv_A 78 IGTAIGYSSMQFASIS---------DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENV---------- 138 (232)
T ss_dssp ECCSSSHHHHHHHTTC---------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHH----------
T ss_pred EeCchhHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhh----------
Confidence 3789999999887732 3579999999999999999999999985 79999988765311 0
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
....||.|++|+++.. +..++..+.++|||||+||+..+-
T Consensus 139 ----------~~~~fD~V~~~~~~~~-------------------------~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 139 ----------NDKVYDMIFIDAAKAQ-------------------------SKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp ----------TTSCEEEEEEETTSSS-------------------------HHHHHHHHGGGEEEEEEEEEECTT
T ss_pred ----------ccCCccEEEEcCcHHH-------------------------HHHHHHHHHHhcCCCeEEEEeeCC
Confidence 0256999999976322 345789999999999999995443
No 56
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.25 E-value=2.4e-06 Score=86.25 Aligned_cols=98 Identities=16% Similarity=0.179 Sum_probs=74.1
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
.|++|..|.+|++++. ++|.|+|+|.++..++.|++++++. +|+..+..|+.......
T Consensus 85 G~G~G~~~~~la~~VG--------~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p~~~~------------ 142 (233)
T 4df3_A 85 GIASGTTASHMSDIIG--------PRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFPEKYR------------ 142 (233)
T ss_dssp TCTTSHHHHHHHHHHC--------TTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCGGGGT------------
T ss_pred cCcCCHHHHHHHHHhC--------CCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCccccc------------
Confidence 6899999999999874 5899999999999998888776554 57877777765532111
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
.....||.|++|.+... .....+.++.++|||||+++-+.
T Consensus 143 ------~~~~~vDvVf~d~~~~~------------------------~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 143 ------HLVEGVDGLYADVAQPE------------------------QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp ------TTCCCEEEEEECCCCTT------------------------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------cccceEEEEEEeccCCh------------------------hHHHHHHHHHHhccCCCEEEEEE
Confidence 11256999999987321 12346889999999999999864
No 57
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.23 E-value=3.6e-06 Score=80.10 Aligned_cols=105 Identities=13% Similarity=0.083 Sum_probs=79.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||++|.-+..++.. +.+.|+|+|.|+.-++.+++++++++..++.+.+.|+..++..
T Consensus 51 lgcG~G~~~~~~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~------------ 108 (189)
T 3p9n_A 51 LYAGSGALGLEALSR----------GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAA------------ 108 (189)
T ss_dssp ETCTTCHHHHHHHHT----------TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHH------------
T ss_pred eCCCcCHHHHHHHHC----------CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhh------------
Confidence 478999998877652 2458999999999999999999999988899999988765310
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhh--ccccCcEEEEecccCC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGIS--LLKVGGRIVYSTCSMN 155 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~--lLk~GG~LVYSTCSl~ 155 (648)
.....||.|++|+|.... .....++|....+ +|+|||+++..+.+-.
T Consensus 109 -------~~~~~fD~i~~~~p~~~~---------------------~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 109 -------GTTSPVDLVLADPPYNVD---------------------SADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp -------CCSSCCSEEEECCCTTSC---------------------HHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred -------ccCCCccEEEECCCCCcc---------------------hhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 012579999999983211 1233456777777 9999999999877643
No 58
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.22 E-value=5.2e-06 Score=79.75 Aligned_cols=116 Identities=9% Similarity=0.089 Sum_probs=88.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..++.. +.+.|+++|.++..+...+.++++.+..++.+...|+..++
T Consensus 67 iG~G~G~~~~~l~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------------- 122 (205)
T 3grz_A 67 VGTGSGILAIAAHKL----------GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV-------------- 122 (205)
T ss_dssp ETCTTSHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC--------------
T ss_pred ECCCCCHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC--------------
Confidence 378889888887652 24689999999999999999999999888888888765432
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
...||.|+++.+. .....+|..+.++|+|||+++.++... +..
T Consensus 123 ---------~~~fD~i~~~~~~-------------------------~~~~~~l~~~~~~L~~gG~l~~~~~~~---~~~ 165 (205)
T 3grz_A 123 ---------DGKFDLIVANILA-------------------------EILLDLIPQLDSHLNEDGQVIFSGIDY---LQL 165 (205)
T ss_dssp ---------CSCEEEEEEESCH-------------------------HHHHHHGGGSGGGEEEEEEEEEEEEEG---GGH
T ss_pred ---------CCCceEEEECCcH-------------------------HHHHHHHHHHHHhcCCCCEEEEEecCc---ccH
Confidence 1569999998752 113578999999999999999987654 355
Q ss_pred HHHHHHHHhCCCceEEEeC
Q 006372 161 AVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 161 aVV~~~L~~~~g~veLvd~ 179 (648)
..+..++++.+ ++++.+
T Consensus 166 ~~~~~~~~~~G--f~~~~~ 182 (205)
T 3grz_A 166 PKIEQALAENS--FQIDLK 182 (205)
T ss_dssp HHHHHHHHHTT--EEEEEE
T ss_pred HHHHHHHHHcC--CceEEe
Confidence 66777787765 555543
No 59
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.20 E-value=9e-06 Score=78.98 Aligned_cols=110 Identities=13% Similarity=0.084 Sum_probs=81.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|+.|.-+.+++... |.+.|+|+|+++..+..+++++++.+.+|+.+...|+..++...
T Consensus 48 iGcG~G~~~~~la~~~---------p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~----------- 107 (214)
T 1yzh_A 48 VGSGKGAFVSGMAKQN---------PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYF----------- 107 (214)
T ss_dssp ESCTTSHHHHHHHHHC---------TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTS-----------
T ss_pred EccCcCHHHHHHHHHC---------CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhc-----------
Confidence 4789999999998763 35789999999999999999999999999999999887654211
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
....||.|++..|. | |.+- ...... -.+..+|..+.++|||||+|+.+|-
T Consensus 108 --------~~~~~D~i~~~~~~---------~--~~~~-~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 108 --------EDGEIDRLYLNFSD---------P--WPKK-RHEKRR--LTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp --------CTTCCSEEEEESCC---------C--CCSG-GGGGGS--TTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred --------CCCCCCEEEEECCC---------C--cccc-chhhhc--cCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 12469999998661 1 2110 000001 1267889999999999999998763
No 60
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.20 E-value=5e-06 Score=79.33 Aligned_cols=136 Identities=13% Similarity=0.076 Sum_probs=80.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||+||+.|.++++.+.. +.+.|+|+|.++.. ..+++.+...|+...+...+.+.. -+...
T Consensus 29 lGcG~G~~~~~l~~~~~~-------~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~-~i~~~ 89 (201)
T 2plw_A 29 IGCYPGSWCQVILERTKN-------YKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNIN-YIDNM 89 (201)
T ss_dssp ESCTTCHHHHHHHHHTTT-------SCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC----------
T ss_pred eCCCCCHHHHHHHHHcCC-------CCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccc-ccccc
Confidence 589999999999887531 14899999999831 235677777777664310000000 00000
Q ss_pred C---ccc--ccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 81 G---IES--ESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 81 ~---~~~--~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
. ... ........||.|++|.++.-.|.- . .+......++..+|..+.++|||||++|.++..
T Consensus 90 ~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~----------~-~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~-- 156 (201)
T 2plw_A 90 NNNSVDYKLKEILQDKKIDIILSDAAVPCIGNK----------I-DDHLNSCELTLSITHFMEQYINIGGTYIVKMYL-- 156 (201)
T ss_dssp --CHHHHHHHHHHTTCCEEEEEECCCCCCCSCH----------H-HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC--
T ss_pred cchhhHHHHHhhcCCCcccEEEeCCCcCCCCCc----------c-cCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC--
Confidence 0 000 000112579999999865444420 0 112233466788999999999999999976543
Q ss_pred ccccHHHHHHHHHh
Q 006372 156 PVENEAVVAEILRK 169 (648)
Q Consensus 156 p~ENEaVV~~~L~~ 169 (648)
.++...+...|+.
T Consensus 157 -~~~~~~l~~~l~~ 169 (201)
T 2plw_A 157 -GSQTNNLKTYLKG 169 (201)
T ss_dssp -STTHHHHHHHHHT
T ss_pred -CCCHHHHHHHHHH
Confidence 3555556666765
No 61
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.20 E-value=3.8e-06 Score=81.55 Aligned_cols=103 Identities=17% Similarity=0.073 Sum_probs=75.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||++|..+..++.. ....|+++|.++..++.+++++++.+..++.+.+.|+..+...
T Consensus 61 lgcG~G~~~~~l~~~----------~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~------------ 118 (202)
T 2fpo_A 61 CFAGSGALGLEALSR----------YAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQ------------ 118 (202)
T ss_dssp TTCTTCHHHHHHHHT----------TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSS------------
T ss_pred eCCCcCHHHHHHHhc----------CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhh------------
Confidence 589999999877553 1248999999999999999999999988899998887653110
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHH--hhccccCcEEEEecccCCc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRG--ISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~A--l~lLk~GG~LVYSTCSl~p 156 (648)
....||.|++|+|.. .+. ...++... .++|+|||+|++++|+...
T Consensus 119 --------~~~~fD~V~~~~p~~-~~~----------------------~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 119 --------KGTPHNIVFVDPPFR-RGL----------------------LEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp --------CCCCEEEEEECCSSS-TTT----------------------HHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred --------cCCCCCEEEECCCCC-CCc----------------------HHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 014699999999932 110 01122222 4569999999999997643
No 62
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.17 E-value=1.1e-05 Score=80.29 Aligned_cols=131 Identities=15% Similarity=0.101 Sum_probs=87.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh--------CCCcEEEeecccccCCCcccCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM--------CTANLIVTNHEAQHFPGCRANK 72 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl--------g~~nv~vtn~Da~~~p~~~~~~ 72 (648)
+||+.|+.+.+++... +.+.|+++|++...+..++.+++++ +.+|+.+...|+..+....
T Consensus 56 iGcG~G~~~~~la~~~---------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~--- 123 (246)
T 2vdv_E 56 IGCGFGGLMIDLSPAF---------PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNF--- 123 (246)
T ss_dssp ETCTTSHHHHHHHHHS---------TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGT---
T ss_pred EcCCCCHHHHHHHHhC---------CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHh---
Confidence 4799999999998863 3568999999999999999999887 7889999999987631100
Q ss_pred CCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 73 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
.....||.|++..|. .|.+-.. ....+ +|..+|..+.++|+|||+|+.+|-
T Consensus 124 ---------------~~~~~~d~v~~~~p~-----------p~~k~~~-~~~r~--~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 124 ---------------FEKGQLSKMFFCFPD-----------PHFKQRK-HKARI--ITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp ---------------SCTTCEEEEEEESCC-----------CC-------CSSC--CCHHHHHHHHHHEEEEEEEEEEES
T ss_pred ---------------ccccccCEEEEECCC-----------cccccch-hHHhh--ccHHHHHHHHHHcCCCCEEEEEec
Confidence 112568999876553 1211000 00011 247899999999999999998653
Q ss_pred cCCccccHHHHHHHHHhCCCceEE
Q 006372 153 SMNPVENEAVVAEILRKCEGSVEL 176 (648)
Q Consensus 153 Sl~p~ENEaVV~~~L~~~~g~veL 176 (648)
. .+-...+...+...+. ++.
T Consensus 175 ~---~~~~~~~~~~~~~~~~-~~~ 194 (246)
T 2vdv_E 175 V---KDLHEWMVKHLEEHPL-FER 194 (246)
T ss_dssp C---HHHHHHHHHHHHHSTT-EEE
T ss_pred c---HHHHHHHHHHHHhCcC-eEe
Confidence 2 2333444445555543 444
No 63
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.17 E-value=4.6e-06 Score=81.70 Aligned_cols=110 Identities=16% Similarity=0.122 Sum_probs=81.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||++|..+.+|+... |...|+|+|++...+...++++++.+.+|+.+...|+..++...
T Consensus 45 iGcG~G~~~~~la~~~---------p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~----------- 104 (213)
T 2fca_A 45 VGTGKGQFISGMAKQN---------PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVF----------- 104 (213)
T ss_dssp ECCTTSHHHHHHHHHC---------TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHC-----------
T ss_pred EecCCCHHHHHHHHHC---------CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhc-----------
Confidence 4799999999998763 35789999999999999999999999999999999987643210
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
....||.|++..|+ | |.+.. .....+ .|..+|..+.++|||||+|+.+|-
T Consensus 105 --------~~~~~d~v~~~~~~---------p--~~~~~-~~~~rl--~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 105 --------EPGEVKRVYLNFSD---------P--WPKKR-HEKRRL--TYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp --------CTTSCCEEEEESCC---------C--CCSGG-GGGGST--TSHHHHHHHHHHHTTSCEEEEEES
T ss_pred --------CcCCcCEEEEECCC---------C--CcCcc-cccccc--CcHHHHHHHHHHcCCCCEEEEEeC
Confidence 11458999987652 1 21100 001111 267889999999999999999873
No 64
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.17 E-value=2.6e-06 Score=82.46 Aligned_cols=99 Identities=10% Similarity=0.016 Sum_probs=77.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccC-CCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHF-PGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~-p~~~~~~~~~~~~ 78 (648)
+++++|..|.+++..+. +.+.|+++|.++..+...++++++.+.. ++.+...|+..+ +.
T Consensus 63 iG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----------- 123 (210)
T 3c3p_A 63 PGDGLGCASWWFARAIS--------ISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAG----------- 123 (210)
T ss_dssp ESCGGGHHHHHHHTTSC--------TTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTT-----------
T ss_pred EcCCccHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhcc-----------
Confidence 36899999999887642 1579999999999999999999998875 588888887543 11
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
. .. ||.|++|+++. .+..+|..+.++|||||+||+.++..
T Consensus 124 ---------~-~~-fD~v~~~~~~~-------------------------~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 124 ---------Q-RD-IDILFMDCDVF-------------------------NGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp ---------C-CS-EEEEEEETTTS-------------------------CHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred ---------C-CC-CCEEEEcCChh-------------------------hhHHHHHHHHHhcCCCeEEEEECccc
Confidence 0 14 99999996521 12457889999999999999987754
No 65
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.13 E-value=7.3e-06 Score=81.28 Aligned_cols=117 Identities=15% Similarity=0.098 Sum_probs=86.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..++... +.+.|+++|.++..+..+++++++++.+++.+.+.|+..++...
T Consensus 77 iG~G~G~~~~~la~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~----------- 136 (240)
T 1xdz_A 77 VGAGAGFPSLPIKICF---------PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRK----------- 136 (240)
T ss_dssp ECSSSCTTHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCT-----------
T ss_pred ecCCCCHHHHHHHHhC---------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccc-----------
Confidence 4788999998887642 35789999999999999999999999988999998886653200
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
.....||.|++++. .+ ...++..+.++|||||++++..+....+|-+
T Consensus 137 -------~~~~~fD~V~~~~~----------~~----------------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~ 183 (240)
T 1xdz_A 137 -------DVRESYDIVTARAV----------AR----------------LSVLSELCLPLVKKNGLFVALKAASAEEELN 183 (240)
T ss_dssp -------TTTTCEEEEEEECC----------SC----------------HHHHHHHHGGGEEEEEEEEEEECC-CHHHHH
T ss_pred -------cccCCccEEEEecc----------CC----------------HHHHHHHHHHhcCCCCEEEEEeCCCchHHHH
Confidence 00146999998651 00 2467899999999999999988776554433
Q ss_pred HHHHHHHHhCC
Q 006372 161 AVVAEILRKCE 171 (648)
Q Consensus 161 aVV~~~L~~~~ 171 (648)
. +...++..+
T Consensus 184 ~-~~~~l~~~g 193 (240)
T 1xdz_A 184 A-GKKAITTLG 193 (240)
T ss_dssp H-HHHHHHHTT
T ss_pred H-HHHHHHHcC
Confidence 3 334566665
No 66
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.12 E-value=8.4e-06 Score=76.13 Aligned_cols=117 Identities=19% Similarity=0.135 Sum_probs=86.8
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeeccccc-CCCcccCCCCCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQH-FPGCRANKNFSSASD 79 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~-~p~~~~~~~~~~~~~ 79 (648)
+|++|.-+.+++.. .+.|+++|.++..+..+++++++.+. .++.+.+.|+.. ++.
T Consensus 41 G~G~G~~~~~l~~~-----------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~------------ 97 (192)
T 1l3i_A 41 GCGTGGVTLELAGR-----------VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK------------ 97 (192)
T ss_dssp SCTTSHHHHHHHTT-----------SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT------------
T ss_pred CCCCCHHHHHHHHh-----------cCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc------------
Confidence 67888888877653 15899999999999999999999988 788888877644 110
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVEN 159 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~EN 159 (648)
...||.|+++.+.. + ...+|..+.++|+|||++++++|+. ++
T Consensus 98 ----------~~~~D~v~~~~~~~---------~----------------~~~~l~~~~~~l~~gG~l~~~~~~~---~~ 139 (192)
T 1l3i_A 98 ----------IPDIDIAVVGGSGG---------E----------------LQEILRIIKDKLKPGGRIIVTAILL---ET 139 (192)
T ss_dssp ----------SCCEEEEEESCCTT---------C----------------HHHHHHHHHHTEEEEEEEEEEECBH---HH
T ss_pred ----------CCCCCEEEECCchH---------H----------------HHHHHHHHHHhcCCCcEEEEEecCc---ch
Confidence 13699999986520 0 1567899999999999999999875 44
Q ss_pred HHHHHHHHHhCCCceEEEeC
Q 006372 160 EAVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 160 EaVV~~~L~~~~g~veLvd~ 179 (648)
..-+..+|++.+-.++.+++
T Consensus 140 ~~~~~~~l~~~g~~~~~~~~ 159 (192)
T 1l3i_A 140 KFEAMECLRDLGFDVNITEL 159 (192)
T ss_dssp HHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEE
Confidence 55566777776645555443
No 67
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.11 E-value=3.4e-05 Score=74.40 Aligned_cols=126 Identities=14% Similarity=0.098 Sum_probs=94.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..++.... +.+.|+++|.++..+...++++...+.+++.+...|+..++.
T Consensus 44 iG~G~G~~~~~l~~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~------------- 102 (219)
T 3dh0_A 44 VGTGAGFYLPYLSKMVG--------EKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPL------------- 102 (219)
T ss_dssp SSCTTCTTHHHHHHHHT--------TTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSS-------------
T ss_pred EecCCCHHHHHHHHHhC--------CCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCC-------------
Confidence 47899999999988753 357999999999999999999999998899999888766531
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcc---
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV--- 157 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~--- 157 (648)
....||.|++... +. .+. -...+|..+.++|||||+++.+++.....
T Consensus 103 --------~~~~fD~v~~~~~------l~-------~~~---------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 152 (219)
T 3dh0_A 103 --------PDNTVDFIFMAFT------FH-------ELS---------EPLKFLEELKRVAKPFAYLAIIDWKKEERDKG 152 (219)
T ss_dssp --------CSSCEEEEEEESC------GG-------GCS---------SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS
T ss_pred --------CCCCeeEEEeehh------hh-------hcC---------CHHHHHHHHHHHhCCCeEEEEEEecccccccC
Confidence 1156999998532 11 110 02568999999999999999998765432
Q ss_pred ------ccHHHHHHHHHhCCCceEEEeC
Q 006372 158 ------ENEAVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 158 ------ENEaVV~~~L~~~~g~veLvd~ 179 (648)
-+..-+..+|++.| |+++.+
T Consensus 153 ~~~~~~~~~~~~~~~l~~~G--f~~~~~ 178 (219)
T 3dh0_A 153 PPPEEVYSEWEVGLILEDAG--IRVGRV 178 (219)
T ss_dssp CCGGGSCCHHHHHHHHHHTT--CEEEEE
T ss_pred CchhcccCHHHHHHHHHHCC--CEEEEE
Confidence 24567778888876 555543
No 68
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.11 E-value=3.1e-06 Score=84.65 Aligned_cols=126 Identities=12% Similarity=0.147 Sum_probs=88.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|+++|+.|..|++++..- .+.+.|+++|+++..+...+ .+ ..++.+...|+..+..+..
T Consensus 88 iG~GtG~~t~~la~~~~~~-----~~~~~V~gvD~s~~~l~~a~----~~-~~~v~~~~gD~~~~~~l~~---------- 147 (236)
T 2bm8_A 88 LGVYNGGSLAWFRDLTKIM-----GIDCQVIGIDRDLSRCQIPA----SD-MENITLHQGDCSDLTTFEH---------- 147 (236)
T ss_dssp ECCTTSHHHHHHHHHHHHT-----TCCCEEEEEESCCTTCCCCG----GG-CTTEEEEECCSSCSGGGGG----------
T ss_pred EeCCCCHHHHHHHHhhhhc-----CCCCEEEEEeCChHHHHHHh----cc-CCceEEEECcchhHHHHHh----------
Confidence 4799999999999874210 13589999999998766543 22 2678888888876411000
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhh-ccccCcEEEEec-ccCCccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGIS-LLKVGGRIVYST-CSMNPVE 158 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~-lLk~GG~LVYST-CSl~p~E 158 (648)
.....||.|++|+. +.+ ...+|..+.+ +|||||+||++. |.+.+..
T Consensus 148 -------~~~~~fD~I~~d~~---------~~~----------------~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~ 195 (236)
T 2bm8_A 148 -------LREMAHPLIFIDNA---------HAN----------------TFNIMKWAVDHLLEEGDYFIIEDMIPYWYRY 195 (236)
T ss_dssp -------GSSSCSSEEEEESS---------CSS----------------HHHHHHHHHHHTCCTTCEEEECSCHHHHHHH
T ss_pred -------hccCCCCEEEECCc---------hHh----------------HHHHHHHHHHhhCCCCCEEEEEeCccccccc
Confidence 00135999999875 101 1346888886 999999999974 5566677
Q ss_pred cHHHHHHHHHhCCCceEEEe
Q 006372 159 NEAVVAEILRKCEGSVELVD 178 (648)
Q Consensus 159 NEaVV~~~L~~~~g~veLvd 178 (648)
+.+.+..+|+.++..|+++.
T Consensus 196 ~~~~~~~~l~~~~~~f~~~~ 215 (236)
T 2bm8_A 196 APQLFSEYLGAFRDVLSMDM 215 (236)
T ss_dssp CHHHHHHHHHTTTTTEEEET
T ss_pred CHHHHHHHHHhCcccEEEcc
Confidence 88899999998876677754
No 69
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.11 E-value=1.1e-05 Score=81.34 Aligned_cols=98 Identities=19% Similarity=0.233 Sum_probs=78.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh-C--CCcEEEeecccccCCCcccCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-C--TANLIVTNHEAQHFPGCRANKNFSSA 77 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl-g--~~nv~vtn~Da~~~p~~~~~~~~~~~ 77 (648)
++|++|..+.+++..+. +.+.|+++|.++..+..+++++++. | ..++.+...|+...+.
T Consensus 106 iG~G~G~~~~~l~~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~---------- 167 (280)
T 1i9g_A 106 AGAGSGALTLSLLRAVG--------PAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL---------- 167 (280)
T ss_dssp ECCTTSHHHHHHHHHHC--------TTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC----------
T ss_pred EcccccHHHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC----------
Confidence 36889999999988763 3579999999999999999999888 7 6789888888765421
Q ss_pred CCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 78 SDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 78 ~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++|+| + .| .+|.++.++|+|||+|+.++++.
T Consensus 168 -----------~~~~~D~v~~~~~---------~--~~----------------~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 168 -----------PDGSVDRAVLDML---------A--PW----------------EVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp -----------CTTCEEEEEEESS---------C--GG----------------GGHHHHHHHEEEEEEEEEEESSH
T ss_pred -----------CCCceeEEEECCc---------C--HH----------------HHHHHHHHhCCCCCEEEEEeCCH
Confidence 0146999999876 1 11 35888999999999999998766
No 70
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.09 E-value=1.2e-05 Score=81.38 Aligned_cols=123 Identities=12% Similarity=0.167 Sum_probs=78.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHH---hCCC-cEEEeecccccCCCcccCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR---MCTA-NLIVTNHEAQHFPGCRANKNFSS 76 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkR---lg~~-nv~vtn~Da~~~p~~~~~~~~~~ 76 (648)
+||++|.-+..++... +...|+++|+++..+.+.+++++. .+.. ++.+.+.|...+......
T Consensus 43 lG~G~G~~~l~la~~~---------~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~----- 108 (260)
T 2ozv_A 43 LGAGAGAAGMAVAARL---------EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVE----- 108 (260)
T ss_dssp CCSSSSHHHHHHHHHC---------TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHH-----
T ss_pred eCChHhHHHHHHHHhC---------CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhh-----
Confidence 5899999999988763 357999999999999999999988 7775 588998887665110000
Q ss_pred CCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEe
Q 006372 77 ASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 77 ~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYS 150 (648)
.......||.|++++|....+ -.++++..+... ..........+|..+.++|||||+++..
T Consensus 109 ---------~~~~~~~fD~Vv~nPPy~~~~-~~~~~~~~~~~a---~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 109 ---------AGLPDEHFHHVIMNPPYNDAG-DRRTPDALKAEA---HAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp ---------TTCCTTCEEEEEECCCC-------------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------hccCCCCcCEEEECCCCcCCC-CCCCcCHHHHHH---hhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 001125799999999987764 233444322100 0001112467899999999999999875
No 71
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.06 E-value=3.3e-06 Score=82.22 Aligned_cols=106 Identities=13% Similarity=0.093 Sum_probs=78.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|..|.+++..+. +.+.|+++|+++..+...++++++.+..+ +.+...|+..+.....
T Consensus 71 iG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--------- 133 (225)
T 3tr6_A 71 IGTFTGYSAIAMGLALP--------KDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELI--------- 133 (225)
T ss_dssp ECCTTSHHHHHHHTTCC--------TTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHH---------
T ss_pred eCCcchHHHHHHHHhCC--------CCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhh---------
Confidence 37899999999987642 25799999999999999999999999864 8888888754311000
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
.......||.|++|++. ..+..++..+.++|||||+||...+..
T Consensus 134 ------~~~~~~~fD~v~~~~~~-------------------------~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 134 ------HAGQAWQYDLIYIDADK-------------------------ANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp ------TTTCTTCEEEEEECSCG-------------------------GGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred ------hccCCCCccEEEECCCH-------------------------HHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 00011579999999861 112447888999999999998876553
No 72
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.05 E-value=1.1e-05 Score=81.57 Aligned_cols=118 Identities=14% Similarity=0.101 Sum_probs=87.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|+++|.-+..++... +.+.|+++|++.+++..++++++++|..|+.+.+.|+..++...
T Consensus 87 iG~G~G~~~i~la~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~----------- 146 (249)
T 3g89_A 87 LGTGAGFPGLPLKIVR---------PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREA----------- 146 (249)
T ss_dssp ETCTTTTTHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTST-----------
T ss_pred EcCCCCHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhccc-----------
Confidence 4889999999887763 35799999999999999999999999999999999887654210
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
.....||.|++.+- .. + ..++..+.++|||||++++..+....+|-
T Consensus 147 -------~~~~~fD~I~s~a~--------------~~--------~----~~ll~~~~~~LkpgG~l~~~~g~~~~~e~- 192 (249)
T 3g89_A 147 -------GHREAYARAVARAV--------------AP--------L----CVLSELLLPFLEVGGAAVAMKGPRVEEEL- 192 (249)
T ss_dssp -------TTTTCEEEEEEESS--------------CC--------H----HHHHHHHGGGEEEEEEEEEEECSCCHHHH-
T ss_pred -------ccCCCceEEEECCc--------------CC--------H----HHHHHHHHHHcCCCeEEEEEeCCCcHHHH-
Confidence 00157999998431 01 1 35788999999999999988877544333
Q ss_pred HHHHHHHHhCCC
Q 006372 161 AVVAEILRKCEG 172 (648)
Q Consensus 161 aVV~~~L~~~~g 172 (648)
.-+..++++.+.
T Consensus 193 ~~~~~~l~~~G~ 204 (249)
T 3g89_A 193 APLPPALERLGG 204 (249)
T ss_dssp TTHHHHHHHHTE
T ss_pred HHHHHHHHHcCC
Confidence 334555666653
No 73
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.04 E-value=4e-05 Score=78.89 Aligned_cols=102 Identities=14% Similarity=0.078 Sum_probs=79.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|..+.++++.. ...|+++|.++..+...++++++.|.. ++.+...|+..+|.
T Consensus 124 iGcG~G~~~~~la~~~----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------ 181 (312)
T 3vc1_A 124 AGCGRGGSMVMAHRRF----------GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPF------------ 181 (312)
T ss_dssp ESCTTSHHHHHHHHHH----------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC------------
T ss_pred ecCCCCHHHHHHHHHc----------CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCC------------
Confidence 4789999999998864 257999999999999999999999976 78888888776541
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p 156 (648)
....||.|++-- ++ ..+. +..+|..+.++|||||+|++++.....
T Consensus 182 ---------~~~~fD~V~~~~------~l-------~~~~----------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 182 ---------DKGAVTASWNNE------ST-------MYVD----------LHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp ---------CTTCEEEEEEES------CG-------GGSC----------HHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred ---------CCCCEeEEEECC------ch-------hhCC----------HHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 125799999631 11 1110 677899999999999999999865544
No 74
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.04 E-value=1.1e-06 Score=88.25 Aligned_cols=105 Identities=12% Similarity=0.074 Sum_probs=78.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+++++|..|..|++.+. +.|.|+++|+++..+...++++++.|.. ++.+...|+..+.....
T Consensus 67 iG~G~G~~t~~la~~~~--------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~--------- 129 (242)
T 3r3h_A 67 LGTFTGYSALAMSLALP--------DDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLL--------- 129 (242)
T ss_dssp EESCCSHHHHHHHHTSC--------TTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHH---------
T ss_pred eeCCcCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHh---------
Confidence 47899999999988753 2589999999999999999999999985 79999888765321000
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
.......||.|++|++.. .....|..++++|||||+||+..+.
T Consensus 130 ------~~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 130 ------NEGGEHQFDFIFIDADKT-------------------------NYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp ------HHHCSSCEEEEEEESCGG-------------------------GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ------hccCCCCEeEEEEcCChH-------------------------HhHHHHHHHHHhcCCCeEEEEECCc
Confidence 000025799999997510 0123688899999999999986554
No 75
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.03 E-value=2.9e-05 Score=72.58 Aligned_cols=120 Identities=17% Similarity=0.181 Sum_probs=86.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc--EEEeecccccCCCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN--LIVTNHEAQHFPGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n--v~vtn~Da~~~p~~~~~~~~~~~~ 78 (648)
++|++|.-+..++.. .+.|+++|.++..+..+++++...+..+ +.+...|+.....
T Consensus 59 iG~G~G~~~~~~~~~-----------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~----------- 116 (194)
T 1dus_A 59 LGCGYGVIGIALADE-----------VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK----------- 116 (194)
T ss_dssp ETCTTSHHHHHHGGG-----------SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT-----------
T ss_pred eCCCCCHHHHHHHHc-----------CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc-----------
Confidence 367888888877654 2589999999999999999999999887 8888887654210
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE 158 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E 158 (648)
...||.|++++|-. |. ......+|..+.++|+|||+++.++++. +
T Consensus 117 -----------~~~~D~v~~~~~~~--------------~~-------~~~~~~~l~~~~~~L~~gG~l~~~~~~~---~ 161 (194)
T 1dus_A 117 -----------DRKYNKIITNPPIR--------------AG-------KEVLHRIIEEGKELLKDNGEIWVVIQTK---Q 161 (194)
T ss_dssp -----------TSCEEEEEECCCST--------------TC-------HHHHHHHHHHHHHHEEEEEEEEEEEEST---H
T ss_pred -----------cCCceEEEECCCcc--------------cc-------hhHHHHHHHHHHHHcCCCCEEEEEECCC---C
Confidence 14699999987631 10 1234578999999999999999998876 2
Q ss_pred cHHHHHHHHHhCCCceEEE
Q 006372 159 NEAVVAEILRKCEGSVELV 177 (648)
Q Consensus 159 NEaVV~~~L~~~~g~veLv 177 (648)
+..-+...|++....++++
T Consensus 162 ~~~~~~~~l~~~~~~~~~~ 180 (194)
T 1dus_A 162 GAKSLAKYMKDVFGNVETV 180 (194)
T ss_dssp HHHHHHHHHHHHHSCCEEE
T ss_pred ChHHHHHHHHHHhcceEEE
Confidence 3333445555433345543
No 76
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.02 E-value=7.5e-06 Score=82.41 Aligned_cols=104 Identities=18% Similarity=0.194 Sum_probs=77.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccC-CCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHF-PGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~-p~~~~~~~~~~~~ 78 (648)
++++.|..|..++..+. +.+.|+++|+++..+...++++++.|. .++.+...|+..+ +.+..
T Consensus 86 iG~G~G~~~~~la~~~~--------~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~-------- 149 (247)
T 1sui_A 86 IGVYTGYSLLATALAIP--------EDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIK-------- 149 (247)
T ss_dssp ECCGGGHHHHHHHHHSC--------TTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH--------
T ss_pred eCCCcCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHh--------
Confidence 47899999999988753 257999999999999999999999998 4688888887653 11100
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
.......||.|++|+++. ....++..++++|||||+||+..+
T Consensus 150 -------~~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 150 -------DEKNHGSYDFIFVDADKD-------------------------NYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp -------SGGGTTCBSEEEECSCST-------------------------THHHHHHHHHHHBCTTCCEEEECT
T ss_pred -------ccCCCCCEEEEEEcCchH-------------------------HHHHHHHHHHHhCCCCeEEEEecC
Confidence 000025699999997521 114568888999999999998763
No 77
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.01 E-value=2e-05 Score=75.76 Aligned_cols=93 Identities=14% Similarity=0.073 Sum_probs=73.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|..|.+++.. .+.|+++|+++..+...++++++++.+++.+...|+...+.
T Consensus 84 iG~G~G~~~~~la~~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~------------- 139 (210)
T 3lbf_A 84 IGTGSGYQTAILAHL-----------VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ------------- 139 (210)
T ss_dssp ECCTTSHHHHHHHHH-----------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-------------
T ss_pred EcCCCCHHHHHHHHh-----------CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-------------
Confidence 478999999999876 25899999999999999999999999899999888765321
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
....||.|+++..+.. -+ ..+.++|||||+||.+...
T Consensus 140 --------~~~~~D~i~~~~~~~~------~~----------------------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 140 --------ARAPFDAIIVTAAPPE------IP----------------------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp --------GGCCEEEEEESSBCSS------CC----------------------THHHHTEEEEEEEEEEECS
T ss_pred --------cCCCccEEEEccchhh------hh----------------------HHHHHhcccCcEEEEEEcC
Confidence 1257999999865311 11 1357899999999998776
No 78
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.99 E-value=1.2e-05 Score=79.36 Aligned_cols=111 Identities=18% Similarity=0.103 Sum_probs=80.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||+.|.-+..++... |...|+++|++...+..++.++++.+..|+.+...|+..+....
T Consensus 41 iGcG~G~~~~~lA~~~---------p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~----------- 100 (218)
T 3dxy_A 41 IGFGMGASLVAMAKDR---------PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKM----------- 100 (218)
T ss_dssp ESCTTCHHHHHHHHHC---------TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHH-----------
T ss_pred EeeeChHHHHHHHHHC---------CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH-----------
Confidence 4789999999998762 45689999999999999999999999999999999987631100
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
.....||.|++.-|.. +.+.....++ -.|..+|..+.++|||||+++.+|-
T Consensus 101 -------~~~~~~d~v~~~~~~p----~~~~~~~~rr----------~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 101 -------IPDNSLRMVQLFFPDP----WHKARHNKRR----------IVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp -------SCTTCEEEEEEESCCC----CCSGGGGGGS----------SCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred -------cCCCChheEEEeCCCC----ccchhhhhhh----------hhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 0125699999875421 0011111011 1245689999999999999999874
No 79
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.97 E-value=1.4e-05 Score=79.66 Aligned_cols=118 Identities=16% Similarity=0.058 Sum_probs=78.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh---CCCc-----------------------
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM---CTAN----------------------- 54 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl---g~~n----------------------- 54 (648)
+||++|..+..++..+.. +...|+++|+|+..++..+.++.+. +..+
T Consensus 58 ~gcGsG~~~~~la~~~~~-------~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 58 PCCGSGYLLTVLGLLHRR-------SLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp TTCTTSHHHHHHHHHTGG-------GEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhcc-------CCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 589999999999887421 2468999999999999999888766 4322
Q ss_pred ---EE-------------EeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCccccccc
Q 006372 55 ---LI-------------VTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKW 118 (648)
Q Consensus 55 ---v~-------------vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kw 118 (648)
+. +...|........ .......||.|++++|......+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~----------------~~~~~~~fD~Iv~npp~~~~~~~---------- 184 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALS----------------AVLAGSAPDVVLTDLPYGERTHW---------- 184 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHH----------------HHHTTCCCSEEEEECCGGGSSSS----------
T ss_pred hhhhhhhccccccccccceeecccccccccc----------------cccCCCCceEEEeCCCeeccccc----------
Confidence 33 5555543311000 00011369999999996433321
Q ss_pred CcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 119 NVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 119 s~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
.. ......+..+|.++.++|||||+|+++.++.
T Consensus 185 ~~---~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 217 (250)
T 1o9g_A 185 EG---QVPGQPVAGLLRSLASALPAHAVIAVTDRSR 217 (250)
T ss_dssp SS---CCCHHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred cc---cccccHHHHHHHHHHHhcCCCcEEEEeCcch
Confidence 11 1234567889999999999999999966653
No 80
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.96 E-value=2.9e-05 Score=82.88 Aligned_cols=119 Identities=13% Similarity=0.062 Sum_probs=89.8
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
.||++|+.+..++.+. +.+.|+++|+|+.-+...+.++++.|. .++.+.+.|+..++..
T Consensus 224 ~gCGsG~~~i~~a~~~---------~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~----------- 283 (373)
T 3tm4_A 224 PMCGSGTILIELALRR---------YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQY----------- 283 (373)
T ss_dssp TTCTTCHHHHHHHHTT---------CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGT-----------
T ss_pred ccCcCcHHHHHHHHhC---------CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcc-----------
Confidence 4899999999887652 235899999999999999999999998 6789999998775420
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVEN 159 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~EN 159 (648)
...||.|++|+|-.- ++ .....+..++.+++..+.+.| ||.++|.||+
T Consensus 284 ----------~~~fD~Ii~npPyg~------------r~--~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~------ 331 (373)
T 3tm4_A 284 ----------VDSVDFAISNLPYGL------------KI--GKKSMIPDLYMKFFNELAKVL--EKRGVFITTE------ 331 (373)
T ss_dssp ----------CSCEEEEEEECCCC--------------------CCHHHHHHHHHHHHHHHE--EEEEEEEESC------
T ss_pred ----------cCCcCEEEECCCCCc------------cc--CcchhHHHHHHHHHHHHHHHc--CCeEEEEECC------
Confidence 146999999999411 11 122346777889999999988 8999999984
Q ss_pred HHHHHHHHHhCC
Q 006372 160 EAVVAEILRKCE 171 (648)
Q Consensus 160 EaVV~~~L~~~~ 171 (648)
...+...+.+.+
T Consensus 332 ~~~~~~~~~~~G 343 (373)
T 3tm4_A 332 KKAIEEAIAENG 343 (373)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 355666777654
No 81
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.96 E-value=2e-05 Score=74.62 Aligned_cols=131 Identities=16% Similarity=0.127 Sum_probs=77.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEe-ecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVT-NHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vt-n~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||+||..|.+++..+.........+.+.|+++|.++.+ ..+++.+. ..|....+...
T Consensus 29 lGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~---------- 87 (196)
T 2nyu_A 29 CGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQ---------- 87 (196)
T ss_dssp ETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHH----------
T ss_pred eCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHH----------
Confidence 589999999999987532100001123799999999842 23455555 55543211000
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVEN 159 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~EN 159 (648)
..........||.|++|.++...|.. .. +......++..+|..+.++|||||++|.+++.- ++
T Consensus 88 ---~~~~~~~~~~fD~V~~~~~~~~~~~~----------~~-~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~---~~ 150 (196)
T 2nyu_A 88 ---RILEVLPGRRADVILSDMAPNATGFR----------DL-DHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG---SQ 150 (196)
T ss_dssp ---HHHHHSGGGCEEEEEECCCCCCCSCH----------HH-HHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS---GG
T ss_pred ---HHHHhcCCCCCcEEEeCCCCCCCCCc----------cc-CHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC---cc
Confidence 00000012479999999865555431 11 112234566789999999999999999887644 33
Q ss_pred HHHHHHHHHh
Q 006372 160 EAVVAEILRK 169 (648)
Q Consensus 160 EaVV~~~L~~ 169 (648)
...+...++.
T Consensus 151 ~~~~~~~l~~ 160 (196)
T 2nyu_A 151 SRRLQRRLTE 160 (196)
T ss_dssp GHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3344455554
No 82
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.95 E-value=1.2e-05 Score=78.52 Aligned_cols=102 Identities=16% Similarity=0.140 Sum_probs=74.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhC-----CCcEEEeecccccCCCcccCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC-----TANLIVTNHEAQHFPGCRANKNFS 75 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg-----~~nv~vtn~Da~~~p~~~~~~~~~ 75 (648)
++|++|..|.+++..+... ..+.+.|+++|.++..+...++++++.+ ..++.+...|+...+..
T Consensus 87 iG~G~G~~~~~la~~~~~~----~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~------- 155 (227)
T 2pbf_A 87 VGSGSGYLTVCMAIKMNVL----ENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE------- 155 (227)
T ss_dssp ESCTTSHHHHHHHHHTTTT----TCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH-------
T ss_pred ECCCCCHHHHHHHHHhccc----CCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc-------
Confidence 4789999999998875310 0135799999999999999999999988 67888888887552100
Q ss_pred CCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 76 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 76 ~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
.......||.|+++.++.. ++..+.++|||||+||.++
T Consensus 156 ----------~~~~~~~fD~I~~~~~~~~----------------------------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 156 ----------EKKELGLFDAIHVGASASE----------------------------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp ----------HHHHHCCEEEEEECSBBSS----------------------------CCHHHHHHEEEEEEEEEEE
T ss_pred ----------cCccCCCcCEEEECCchHH----------------------------HHHHHHHhcCCCcEEEEEE
Confidence 0011256999999988641 2366788999999998875
No 83
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.94 E-value=4.3e-05 Score=70.82 Aligned_cols=115 Identities=17% Similarity=0.119 Sum_probs=85.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..++. . ...|+++|.++..+..+++++++++.+++.+.+.|+.. + +
T Consensus 42 iG~G~G~~~~~l~~--~---------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~---~---------- 96 (183)
T 2yxd_A 42 VGCGSGGMTVEIAK--R---------CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V---L---------- 96 (183)
T ss_dssp ESCCCSHHHHHHHT--T---------SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H---G----------
T ss_pred eCCCCCHHHHHHHh--c---------CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c---c----------
Confidence 36889998888766 1 46899999999999999999999998888888887654 1 0
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
....||.|+++.+ .+ ...+|..+.++ |||++++++|+. ++-
T Consensus 97 --------~~~~~D~i~~~~~--------~~------------------~~~~l~~~~~~--~gG~l~~~~~~~---~~~ 137 (183)
T 2yxd_A 97 --------DKLEFNKAFIGGT--------KN------------------IEKIIEILDKK--KINHIVANTIVL---ENA 137 (183)
T ss_dssp --------GGCCCSEEEECSC--------SC------------------HHHHHHHHHHT--TCCEEEEEESCH---HHH
T ss_pred --------cCCCCcEEEECCc--------cc------------------HHHHHHHHhhC--CCCEEEEEeccc---ccH
Confidence 0146999999877 01 12456666666 999999999876 344
Q ss_pred HHHHHHHHhCCCceEEEeC
Q 006372 161 AVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 161 aVV~~~L~~~~g~veLvd~ 179 (648)
.-+...|++++..++.+.+
T Consensus 138 ~~~~~~l~~~g~~~~~~~~ 156 (183)
T 2yxd_A 138 AKIINEFESRGYNVDAVNV 156 (183)
T ss_dssp HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHcCCeEEEEEe
Confidence 4567777887766666553
No 84
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.93 E-value=1.4e-05 Score=73.04 Aligned_cols=123 Identities=19% Similarity=0.063 Sum_probs=81.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|..+.+++..+. +.+.|+++|.++ .+. .+++.+...|+..++....
T Consensus 29 ~G~G~G~~~~~l~~~~~--------~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~~~---------- 79 (180)
T 1ej0_A 29 LGAAPGGWSQYVVTQIG--------GKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVMKA---------- 79 (180)
T ss_dssp ESCTTCHHHHHHHHHHC--------TTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHHHH----------
T ss_pred eCCCCCHHHHHHHHHhC--------CCCeEEEEECcc-ccc----------cCcEEEEEcccccchhhhh----------
Confidence 47899999999988763 246899999988 332 2567777777654320000
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
.........||.|++|.|+...|.. ..+......++..+|..+.++|+|||+++.++... ++.
T Consensus 80 ---~~~~~~~~~~D~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~---~~~ 142 (180)
T 1ej0_A 80 ---LLERVGDSKVQVVMSDMAPNMSGTP-----------AVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG---EGF 142 (180)
T ss_dssp ---HHHHHTTCCEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS---TTH
T ss_pred ---hhccCCCCceeEEEECCCccccCCC-----------ccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC---CcH
Confidence 0000112579999999998766641 01122345567899999999999999999776543 455
Q ss_pred HHHHHHHHh
Q 006372 161 AVVAEILRK 169 (648)
Q Consensus 161 aVV~~~L~~ 169 (648)
..+...++.
T Consensus 143 ~~~~~~~~~ 151 (180)
T 1ej0_A 143 DEYLREIRS 151 (180)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 556666665
No 85
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.91 E-value=2e-05 Score=73.69 Aligned_cols=102 Identities=14% Similarity=0.062 Sum_probs=74.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|+.|.-+..++.. +.+.|+++|.++..++.++.+++..+.. ++.+...|+..+..
T Consensus 38 lGcG~G~~~~~l~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------------ 95 (177)
T 2esr_A 38 LFAGSGGLAIEAVSR----------GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID------------ 95 (177)
T ss_dssp ETCTTCHHHHHHHHT----------TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH------------
T ss_pred eCCCCCHHHHHHHHc----------CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH------------
Confidence 478999999888663 2468999999999999999999998875 78888888765311
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHH--hhccccCcEEEEecccCC
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRG--ISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~A--l~lLk~GG~LVYSTCSl~ 155 (648)
.....||.|++|+|... + .. ..++... .++|+|||+++.++++-.
T Consensus 96 --------~~~~~fD~i~~~~~~~~-~------------------~~----~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 96 --------CLTGRFDLVFLDPPYAK-E------------------TI----VATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp --------HBCSCEEEEEECCSSHH-H------------------HH----HHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred --------hhcCCCCEEEECCCCCc-c------------------hH----HHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 00145999999988420 0 01 1122222 589999999999988764
No 86
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.90 E-value=4.5e-05 Score=79.57 Aligned_cols=97 Identities=19% Similarity=0.160 Sum_probs=72.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhC-----------CCcEEEeecccccCCCcc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC-----------TANLIVTNHEAQHFPGCR 69 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg-----------~~nv~vtn~Da~~~p~~~ 69 (648)
++|++|..|..++..+. +.+.|+++|.++..+...++++.+++ ..++.+...|+..++..
T Consensus 112 iG~G~G~~~~~la~~~g--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~- 182 (336)
T 2b25_A 112 AGSGSGGMSLFLSKAVG--------SQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED- 182 (336)
T ss_dssp ECCTTSHHHHHHHHHHC--------TTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred eCCCcCHHHHHHHHHhC--------CCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc-
Confidence 47899999999988753 35899999999999999999998864 35788888887654210
Q ss_pred cCCCCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEE
Q 006372 70 ANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY 149 (648)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVY 149 (648)
.....||.|++|.|. | |. +|..+.++|||||+||.
T Consensus 183 ------------------~~~~~fD~V~~~~~~---------~-----~~-------------~l~~~~~~LkpgG~lv~ 217 (336)
T 2b25_A 183 ------------------IKSLTFDAVALDMLN---------P-----HV-------------TLPVFYPHLKHGGVCAV 217 (336)
T ss_dssp -----------------------EEEEEECSSS---------T-----TT-------------THHHHGGGEEEEEEEEE
T ss_pred ------------------cCCCCeeEEEECCCC---------H-----HH-------------HHHHHHHhcCCCcEEEE
Confidence 011469999998762 1 11 57889999999999984
Q ss_pred ec
Q 006372 150 ST 151 (648)
Q Consensus 150 ST 151 (648)
.+
T Consensus 218 ~~ 219 (336)
T 2b25_A 218 YV 219 (336)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 87
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.89 E-value=2.4e-05 Score=73.31 Aligned_cols=108 Identities=16% Similarity=0.104 Sum_probs=75.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||++|.-+..++.. +...|+++|.++..++..++++++.+. +++.+.+.|+..+....
T Consensus 51 ~GcG~G~~~~~~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~---------- 110 (187)
T 2fhp_A 51 LYSGSGGLAIEAVSR----------GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQF---------- 110 (187)
T ss_dssp TTCTTCHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHH----------
T ss_pred eCCccCHHHHHHHHc----------CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHH----------
Confidence 578999999887652 236899999999999999999999987 57888888876531100
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p 156 (648)
......||.|++|+|-. .+ . .... .+.+ .+.++|+|||+++.++|+-..
T Consensus 111 -------~~~~~~fD~i~~~~~~~-~~------------~------~~~~-~~~l-~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 111 -------YEEKLQFDLVLLDPPYA-KQ------------E------IVSQ-LEKM-LERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp -------HHTTCCEEEEEECCCGG-GC------------C------HHHH-HHHH-HHTTCEEEEEEEEEEEETTCC
T ss_pred -------HhcCCCCCEEEECCCCC-ch------------h------HHHH-HHHH-HHhcccCCCCEEEEEeCCccc
Confidence 00025699999998821 00 0 0011 1112 248899999999999998643
No 88
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.89 E-value=3.7e-05 Score=79.81 Aligned_cols=96 Identities=15% Similarity=0.227 Sum_probs=74.8
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|..+.++++.... .+.|+++|.++..+...++++++.|..++.+...|+...+.
T Consensus 82 iGcG~G~~~~~la~~~~~--------~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~------------- 140 (317)
T 1dl5_A 82 IGGGTGYNAAVMSRVVGE--------KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP------------- 140 (317)
T ss_dssp ECCTTSHHHHHHHHHHCT--------TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-------------
T ss_pred ecCCchHHHHHHHHhcCC--------CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc-------------
Confidence 368899999999887431 47899999999999999999999999888888888765321
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
....||+|+++.++...+ ..+.++|||||+|+.+..+
T Consensus 141 --------~~~~fD~Iv~~~~~~~~~----------------------------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 141 --------EFSPYDVIFVTVGVDEVP----------------------------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp --------GGCCEEEEEECSBBSCCC----------------------------HHHHHHEEEEEEEEEEBCB
T ss_pred --------cCCCeEEEEEcCCHHHHH----------------------------HHHHHhcCCCcEEEEEECC
Confidence 114699999998764222 2456799999999998543
No 89
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.87 E-value=7.5e-05 Score=73.75 Aligned_cols=102 Identities=16% Similarity=0.113 Sum_probs=78.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|.-+.++++.. .+.|+++|.++..+...+++++..|..+ +.+...|+..+|.
T Consensus 53 iG~G~G~~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------------ 110 (257)
T 3f4k_A 53 IGCGTGGQTLFLADYV----------KGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF------------ 110 (257)
T ss_dssp ETCTTSHHHHHHHHHC----------CSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS------------
T ss_pred eCCCCCHHHHHHHHhC----------CCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC------------
Confidence 3688999999988763 2489999999999999999999999875 8888888866541
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p 156 (648)
....||.|++...... +. ...+|..+.++|||||+|+.++++...
T Consensus 111 ---------~~~~fD~v~~~~~l~~-------------~~----------~~~~l~~~~~~L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 111 ---------QNEELDLIWSEGAIYN-------------IG----------FERGMNEWSKYLKKGGFIAVSEASWFT 155 (257)
T ss_dssp ---------CTTCEEEEEEESCSCC-------------CC----------HHHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred ---------CCCCEEEEEecChHhh-------------cC----------HHHHHHHHHHHcCCCcEEEEEEeeccC
Confidence 1257999998643110 00 135789999999999999999986443
No 90
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.83 E-value=2.5e-05 Score=76.23 Aligned_cols=100 Identities=16% Similarity=0.144 Sum_probs=73.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|..+.+++..+. +.+.|+++|.++..+..+++++++. +++.+...|+.......
T Consensus 80 lG~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~----------- 138 (227)
T 1g8a_A 80 LGIASGTTASHVSDIVG--------WEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYR----------- 138 (227)
T ss_dssp ETTTSTTHHHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGT-----------
T ss_pred EeccCCHHHHHHHHHhC--------CCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhh-----------
Confidence 36899999999988763 2479999999999999888887665 68888888876531100
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
.....||.|++|+| .++ ....+|..+.++|||||+++.+.+
T Consensus 139 -------~~~~~~D~v~~~~~---------~~~---------------~~~~~l~~~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 139 -------ALVPKVDVIFEDVA---------QPT---------------QAKILIDNAEVYLKRGGYGMIAVK 179 (227)
T ss_dssp -------TTCCCEEEEEECCC---------STT---------------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------cccCCceEEEECCC---------CHh---------------HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 00146999999987 111 123348889999999999999843
No 91
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.82 E-value=5.9e-06 Score=86.24 Aligned_cols=115 Identities=12% Similarity=0.076 Sum_probs=70.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcC----ChHHHHHHHHHHHHhCCCcEEEeec-ccccCCCcccCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL----DVQRCNLLIHQTKRMCTANLIVTNH-EAQHFPGCRANKNFS 75 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~----d~kR~~~L~~~lkRlg~~nv~vtn~-Da~~~p~~~~~~~~~ 75 (648)
+|||||+.|..+++. |.|+|+|. +..++..+ ..++++.+++.+... |+..+|
T Consensus 89 lGcG~G~~s~~la~~------------~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~--------- 145 (305)
T 2p41_A 89 LGCGRGGWSYYCGGL------------KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIP--------- 145 (305)
T ss_dssp ETCTTSHHHHHHHTS------------TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSC---------
T ss_pred EcCCCCHHHHHHHhc------------CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCC---------
Confidence 599999999988763 46899998 44332111 112334456777666 554432
Q ss_pred CCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 76 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 76 ~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
...||.|++|.+|+ .|.. ... +..+..+|..+.++|||||.+|. +.+.
T Consensus 146 --------------~~~fD~V~sd~~~~-~g~~----------~~d-----~~~~l~~L~~~~~~LkpGG~~v~--kv~~ 193 (305)
T 2p41_A 146 --------------PERCDTLLCDIGES-SPNP----------TVE-----AGRTLRVLNLVENWLSNNTQFCV--KVLN 193 (305)
T ss_dssp --------------CCCCSEEEECCCCC-CSSH----------HHH-----HHHHHHHHHHHHHHCCTTCEEEE--EESC
T ss_pred --------------cCCCCEEEECCccc-cCcc----------hhh-----HHHHHHHHHHHHHHhCCCCEEEE--EeCC
Confidence 14699999999997 6641 111 11123578888899999998885 3445
Q ss_pred ccccH--HHHHHHHHhC
Q 006372 156 PVENE--AVVAEILRKC 170 (648)
Q Consensus 156 p~ENE--aVV~~~L~~~ 170 (648)
+.+.+ ..+..+...+
T Consensus 194 ~~~~~~~~~l~~l~~~f 210 (305)
T 2p41_A 194 PYMSSVIEKMEALQRKH 210 (305)
T ss_dssp CCSHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHc
Confidence 53322 3444443333
No 92
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.81 E-value=7.2e-05 Score=78.12 Aligned_cols=92 Identities=15% Similarity=0.109 Sum_probs=73.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
.|+||+-|+.++... +.+.|+++|+|+.++...++++++.|..++.+...|+..+|
T Consensus 130 GcG~G~~ta~~lA~~---------~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--------------- 185 (298)
T 3fpf_A 130 GGGPLPLTGILLSHV---------YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--------------- 185 (298)
T ss_dssp CCCSSCHHHHHHHHT---------TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG---------------
T ss_pred CCCccHHHHHHHHHc---------cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC---------------
Confidence 578888887665432 24799999999999999999999999888999999987653
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEe
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYS 150 (648)
...||.|++++- .++ ..+++....+.|||||+||..
T Consensus 186 --------d~~FDvV~~~a~---------~~d----------------~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 186 --------GLEFDVLMVAAL---------AEP----------------KRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp --------GCCCSEEEECTT---------CSC----------------HHHHHHHHHHHCCTTCEEEEE
T ss_pred --------CCCcCEEEECCC---------ccC----------------HHHHHHHHHHHcCCCcEEEEE
Confidence 146999998653 011 246789999999999999975
No 93
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.79 E-value=3e-05 Score=75.56 Aligned_cols=104 Identities=15% Similarity=0.085 Sum_probs=76.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCC-CcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFP-GCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p-~~~~~~~~~~~~ 78 (648)
++|+.|.-|.+++..+. +.+.|+++|.++..+...++++++.|. .++.+...|+..+. .+.
T Consensus 76 iG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~--------- 138 (229)
T 2avd_A 76 LGTFTGYSALALALALP--------ADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELL--------- 138 (229)
T ss_dssp ECCTTSHHHHHHHTTSC--------TTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHH---------
T ss_pred EcCCccHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHH---------
Confidence 36788999988877542 157999999999999999999999987 57888888875421 100
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
.......||.|++|++. ..+..++..++++|+|||+||...+.
T Consensus 139 -------~~~~~~~~D~v~~d~~~-------------------------~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 139 -------AAGEAGTFDVAVVDADK-------------------------ENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp -------HTTCTTCEEEEEECSCS-------------------------TTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred -------hcCCCCCccEEEECCCH-------------------------HHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 00001469999999870 01245688899999999999997765
No 94
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.79 E-value=8.2e-05 Score=74.42 Aligned_cols=103 Identities=15% Similarity=0.085 Sum_probs=78.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|.-+..+++. +.+.|+++|.++..+...+++++..+.+ ++.+...|+..+|.
T Consensus 53 iGcG~G~~~~~la~~----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------ 110 (267)
T 3kkz_A 53 IGCGTGGQTMVLAGH----------VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF------------ 110 (267)
T ss_dssp ETCTTCHHHHHHHTT----------CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC------------
T ss_pred eCCCCCHHHHHHHhc----------cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC------------
Confidence 367889988888664 2468999999999999999999999985 58999888866541
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 157 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ 157 (648)
....||.|++...... +. ...+|..+.++|||||+++.++++..+.
T Consensus 111 ---------~~~~fD~i~~~~~~~~-------------~~----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 156 (267)
T 3kkz_A 111 ---------RNEELDLIWSEGAIYN-------------IG----------FERGLNEWRKYLKKGGYLAVSECSWFTD 156 (267)
T ss_dssp ---------CTTCEEEEEESSCGGG-------------TC----------HHHHHHHHGGGEEEEEEEEEEEEEESSS
T ss_pred ---------CCCCEEEEEEcCCcee-------------cC----------HHHHHHHHHHHcCCCCEEEEEEeeecCC
Confidence 1257999998644211 11 1457899999999999999999875444
No 95
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=97.79 E-value=1.4e-05 Score=82.81 Aligned_cols=112 Identities=19% Similarity=0.129 Sum_probs=74.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||++|..|..|++. .+.|+|+|+|+..+..+++++++.+.+++.+.+.|+..++.
T Consensus 49 iG~G~G~lt~~La~~-----------~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~------------- 104 (299)
T 2h1r_A 49 IGCGTGNLTVKLLPL-----------AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF------------- 104 (299)
T ss_dssp ECCTTSTTHHHHTTT-----------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC-------------
T ss_pred EcCcCcHHHHHHHhc-----------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc-------------
Confidence 478999999988653 35899999999999999999988888889888888766431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCccccccc--CcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKW--NVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kw--s~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
..||.|++|+|+..... .++.-. .+.-...+-..|+ ..|.++++++|...|+|||+
T Consensus 105 ----------~~~D~Vv~n~py~~~~~-----~~~~ll~~~~~~~~~~l~~Q~---e~a~rlla~~G~~~y~~ls~ 162 (299)
T 2h1r_A 105 ----------PKFDVCTANIPYKISSP-----LIFKLISHRPLFKCAVLMFQK---EFAERMLANVGDSNYSRLTI 162 (299)
T ss_dssp ----------CCCSEEEEECCGGGHHH-----HHHHHHHCSSCCSEEEEEEEH---HHHHHHTCCTTSTTCCHHHH
T ss_pred ----------ccCCEEEEcCCcccccH-----HHHHHHhcCCccceeeehHHH---HHHHHHhcCCCCcchhHHHH
Confidence 35899999999654321 110000 0000000011222 45678899999999999987
No 96
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.78 E-value=6.4e-05 Score=73.90 Aligned_cols=99 Identities=28% Similarity=0.435 Sum_probs=72.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+.+|++... +.+.|+++|.++.-+..+.++.++. +++.+...|+.....+.
T Consensus 84 lG~G~G~~~~~la~~~g--------~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~----------- 142 (233)
T 2ipx_A 84 LGAASGTTVSHVSDIVG--------PDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYR----------- 142 (233)
T ss_dssp ECCTTSHHHHHHHHHHC--------TTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGG-----------
T ss_pred EcccCCHHHHHHHHHhC--------CCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhc-----------
Confidence 36889999999988752 3579999999998777777777665 67888888876532110
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
.....||.|++|+| .|+ ....++.++.++|||||+++.++
T Consensus 143 -------~~~~~~D~V~~~~~---------~~~---------------~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 143 -------MLIAMVDVIFADVA---------QPD---------------QTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp -------GGCCCEEEEEECCC---------CTT---------------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -------ccCCcEEEEEEcCC---------Ccc---------------HHHHHHHHHHHHcCCCeEEEEEE
Confidence 01257999999987 111 12345778999999999999853
No 97
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=97.77 E-value=0.0001 Score=80.30 Aligned_cols=77 Identities=14% Similarity=0.062 Sum_probs=60.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||+.|..+..|+.. .+.|+|+|.++.-++..++++++.+..|+.+.+.|+..+....
T Consensus 293 lgcG~G~~~~~la~~-----------~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~----------- 350 (433)
T 1uwv_A 293 LFCGMGNFTLPLATQ-----------AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQ----------- 350 (433)
T ss_dssp ESCTTTTTHHHHHTT-----------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSS-----------
T ss_pred CCCCCCHHHHHHHhh-----------CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhh-----------
Confidence 478999999888664 3589999999999999999999999989999999886632100
Q ss_pred CcccccccccccccEEEEcCCCCCC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGD 105 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGd 105 (648)
......||.|++|||.+|.
T Consensus 351 ------~~~~~~fD~Vv~dPPr~g~ 369 (433)
T 1uwv_A 351 ------PWAKNGFDKVLLDPARAGA 369 (433)
T ss_dssp ------GGGTTCCSEEEECCCTTCC
T ss_pred ------hhhcCCCCEEEECCCCccH
Confidence 0112469999999997654
No 98
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.76 E-value=8.9e-05 Score=80.86 Aligned_cols=139 Identities=12% Similarity=0.111 Sum_probs=92.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCC----CCCCEEEEEEcCChHHHHHHHHHHHHhCCC--cEEEeecccccCCCcccCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPG----ALPNGMVIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQHFPGCRANKNF 74 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~----~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~--nv~vtn~Da~~~p~~~~~~~~ 74 (648)
.||++|+...++++.+....... ......|+++|+++.-+.+.+.++...|.. ++.+.+.|+...+.
T Consensus 178 pacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~------- 250 (445)
T 2okc_A 178 PACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP------- 250 (445)
T ss_dssp TTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC-------
T ss_pred cCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc-------
Confidence 48999999999998874310000 001246999999999999999888877764 55666777544321
Q ss_pred CCCCCcCcccccccccccccEEEEcCCCCCCCccccC---cccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 75 SSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKA---PDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~---p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
...||.|++.||.++.....+. .+.+ +. -...+...|.+++++||+||++++.+
T Consensus 251 ---------------~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~--~~------~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 251 ---------------STLVDVILANPPFGTRPAGSVDINRPDFY--VE------TKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp ---------------SSCEEEEEECCCSSCCCTTCCCCCCTTSS--SC------CSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------------cCCcCEEEECCCCCCcccccchhhHhhcC--CC------CcchHHHHHHHHHHHhccCCEEEEEE
Confidence 1379999999999987654321 1111 11 11246789999999999999999988
Q ss_pred cc--CCccccHHHHH-HHHHh
Q 006372 152 CS--MNPVENEAVVA-EILRK 169 (648)
Q Consensus 152 CS--l~p~ENEaVV~-~~L~~ 169 (648)
+. ++....+..+. +++++
T Consensus 308 p~~~L~~~~~~~~iR~~L~~~ 328 (445)
T 2okc_A 308 PDNVLFEAGAGETIRKRLLQD 328 (445)
T ss_dssp EHHHHHCSTHHHHHHHHHHHH
T ss_pred CCcccccCcHHHHHHHHHHhc
Confidence 75 33333344444 45555
No 99
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.76 E-value=0.00029 Score=70.00 Aligned_cols=147 Identities=14% Similarity=0.137 Sum_probs=90.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeeccccc-CCCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQH-FPGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~-~p~~~~~~~~~~~~ 78 (648)
+||++|..+..++.... .+.|+++|+++.-+...++++++.+..+ +.+.+.|+.. +... +.
T Consensus 72 lG~G~G~~~~~la~~~~---------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~------- 134 (254)
T 2h00_A 72 IGTGASCIYPLLGATLN---------GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDA-LK------- 134 (254)
T ss_dssp ESCTTTTHHHHHHHHHH---------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTT-ST-------
T ss_pred eCCChhHHHHHHHHhCC---------CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhh-hh-------
Confidence 48999999999887653 3689999999999999999999999865 8888888754 2110 00
Q ss_pred CcCcccccccccccccEEEEcCCCCCCC-c---c-ccC-----cc--ccc----ccCcchhhhhHHHHHHHHHHHhhccc
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDG-T---L-RKA-----PD--IWR----KWNVGLGNGLHSLQVQIAMRGISLLK 142 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdG-t---l-rk~-----p~--i~~----kws~~~~~~L~~lQ~~IL~~Al~lLk 142 (648)
......||.|++++|+-..+ . + .++ |. +.. -..+.. .+ .+-..++..+..+++
T Consensus 135 --------~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG--~l-~~~~~~~~~~~~~l~ 203 (254)
T 2h00_A 135 --------EESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGG--EL-EFVKRIIHDSLQLKK 203 (254)
T ss_dssp --------TCCSCCBSEEEECCCCC-------------------------CTTTTHHHHT--HH-HHHHHHHHHHHHHGG
T ss_pred --------cccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCC--EE-EEEHHHHHHHHhccc
Confidence 00014699999999998766 1 1 010 10 000 001111 12 223457777888899
Q ss_pred cCcEEEEecccCCccccHHHHHHHHHhCCC-ceEEEe
Q 006372 143 VGGRIVYSTCSMNPVENEAVVAEILRKCEG-SVELVD 178 (648)
Q Consensus 143 ~GG~LVYSTCSl~p~ENEaVV~~~L~~~~g-~veLvd 178 (648)
++|.++ +.+....+...+..+|++.|- .++..+
T Consensus 204 ~~g~~~---~~~~~~~~~~~~~~~l~~~Gf~~v~~~~ 237 (254)
T 2h00_A 204 RLRWYS---CMLGKKCSLAPLKEELRIQGVPKVTYTE 237 (254)
T ss_dssp GBSCEE---EEESSTTSHHHHHHHHHHTTCSEEEEEE
T ss_pred ceEEEE---ECCCChhHHHHHHHHHHHcCCCceEEEE
Confidence 988654 334455665567777887652 344444
No 100
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.76 E-value=4.7e-05 Score=75.33 Aligned_cols=105 Identities=17% Similarity=0.152 Sum_probs=77.5
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccC-CCcccCCCCCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHF-PGCRANKNFSSASD 79 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~-p~~~~~~~~~~~~~ 79 (648)
+|+.|.-|.+++..+. +.+.|+++|.++..+...++++++.|.. ++.+...|+..+ +.+..
T Consensus 80 G~G~G~~~~~la~~~~--------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~--------- 142 (232)
T 3cbg_A 80 GVFRGYSALAMALQLP--------PDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQ--------- 142 (232)
T ss_dssp CCTTSHHHHHHHTTSC--------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHT---------
T ss_pred cCCCCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh---------
Confidence 6788999988877642 1579999999999999999999999985 588888876542 11100
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
......||.|++|+++ + ....++..++++|+|||+||+..+...
T Consensus 143 -------~~~~~~fD~V~~d~~~---------~----------------~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 143 -------GKPLPEFDLIFIDADK---------R----------------NYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp -------SSSCCCEEEEEECSCG---------G----------------GHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred -------cCCCCCcCEEEECCCH---------H----------------HHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 0001469999999762 0 113468889999999999999988764
No 101
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.75 E-value=0.00035 Score=70.05 Aligned_cols=116 Identities=14% Similarity=0.105 Sum_probs=87.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeeccccc-CCCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQH-FPGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~-~p~~~~~~~~~~~~ 78 (648)
+|++.|.-+..++.. .+.+.|+|+|+++..+...++|++++|.. ++.+...|+.. ++
T Consensus 22 IGtGsG~l~i~la~~---------~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~------------ 80 (225)
T 3kr9_A 22 VGSDHAYLPIELVER---------GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFE------------ 80 (225)
T ss_dssp ETCSTTHHHHHHHHT---------TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC------------
T ss_pred eCCCcHHHHHHHHHh---------CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcc------------
Confidence 488999998888764 14679999999999999999999999987 48888887632 11
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE 158 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E 158 (648)
....||.|++ .|.|- .+=.+||..+...|++||++|.+.- .
T Consensus 81 ----------~~~~~D~Ivi----aG~Gg--------------------~~i~~Il~~~~~~L~~~~~lVlq~~-----~ 121 (225)
T 3kr9_A 81 ----------ETDQVSVITI----AGMGG--------------------RLIARILEEGLGKLANVERLILQPN-----N 121 (225)
T ss_dssp ----------GGGCCCEEEE----EEECH--------------------HHHHHHHHHTGGGCTTCCEEEEEES-----S
T ss_pred ----------cCcCCCEEEE----cCCCh--------------------HHHHHHHHHHHHHhCCCCEEEEECC-----C
Confidence 0125999886 23331 2235789999999999999999654 4
Q ss_pred cHHHHHHHHHhCCCceEEEe
Q 006372 159 NEAVVAEILRKCEGSVELVD 178 (648)
Q Consensus 159 NEaVV~~~L~~~~g~veLvd 178 (648)
....|..+|.+++ |.+++
T Consensus 122 ~~~~vr~~L~~~G--f~i~~ 139 (225)
T 3kr9_A 122 REDDLRIWLQDHG--FQIVA 139 (225)
T ss_dssp CHHHHHHHHHHTT--EEEEE
T ss_pred CHHHHHHHHHHCC--CEEEE
Confidence 7888888888875 55544
No 102
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.73 E-value=7.5e-05 Score=73.11 Aligned_cols=101 Identities=10% Similarity=0.124 Sum_probs=74.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhC-----CCcEEEeecccccCCCcccCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC-----TANLIVTNHEAQHFPGCRANKNFS 75 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg-----~~nv~vtn~Da~~~p~~~~~~~~~ 75 (648)
++|++|..|.++++.+... +..+.+.|+++|.++..+...++++.+.+ ..++.+...|+....
T Consensus 91 iG~G~G~~~~~la~~~~~~---~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~--------- 158 (227)
T 1r18_A 91 VGSGSGYLTACFYRYIKAK---GVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY--------- 158 (227)
T ss_dssp ESCTTSHHHHHHHHHHHHS---CCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC---------
T ss_pred ECCCccHHHHHHHHhcccc---cCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCC---------
Confidence 4789999999999876420 00123699999999999999999998877 678888888865410
Q ss_pred CCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 76 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 76 ~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
.....||+|+++.++.. ++..+.++|||||+||.++-.
T Consensus 159 ------------~~~~~fD~I~~~~~~~~----------------------------~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 159 ------------PPNAPYNAIHVGAAAPD----------------------------TPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp ------------GGGCSEEEEEECSCBSS----------------------------CCHHHHHTEEEEEEEEEEESC
T ss_pred ------------CcCCCccEEEECCchHH----------------------------HHHHHHHHhcCCCEEEEEEec
Confidence 01146999999988521 125678899999999988643
No 103
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.72 E-value=6.9e-05 Score=80.57 Aligned_cols=107 Identities=13% Similarity=0.146 Sum_probs=81.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|+.|.-+..++.. ...|+++|+|+.-+...++++++.+.. +.+...|+..++.
T Consensus 240 lGcG~G~~~~~la~~-----------g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~~------------- 294 (381)
T 3dmg_A 240 LGAGYGALTLPLARM-----------GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEALT------------- 294 (381)
T ss_dssp ETCTTSTTHHHHHHT-----------TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTSC-------------
T ss_pred EeeeCCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhccc-------------
Confidence 478889888888764 248999999999999999999998865 6677777665421
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 157 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ 157 (648)
....||.|++++|....+.. .......++..+.++|||||+++.+++...+.
T Consensus 295 --------~~~~fD~Ii~npp~~~~~~~-----------------~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~ 346 (381)
T 3dmg_A 295 --------EEARFDIIVTNPPFHVGGAV-----------------ILDVAQAFVNVAAARLRPGGVFFLVSNPFLKY 346 (381)
T ss_dssp --------TTCCEEEEEECCCCCTTCSS-----------------CCHHHHHHHHHHHHHEEEEEEEEEEECTTSCH
T ss_pred --------cCCCeEEEEECCchhhcccc-----------------cHHHHHHHHHHHHHhcCcCcEEEEEEcCCCCh
Confidence 02579999999997543321 11345678999999999999999998887643
No 104
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.70 E-value=0.00014 Score=69.61 Aligned_cols=96 Identities=17% Similarity=0.152 Sum_probs=75.8
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..++... +.+.|+++|.++..+..+++++++++.+++.+.+.|+..++.
T Consensus 72 iG~G~G~~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~------------- 129 (207)
T 1jsx_A 72 VGTGPGLPGIPLSIVR---------PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS------------- 129 (207)
T ss_dssp ETCTTTTTHHHHHHHC---------TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC-------------
T ss_pred ECCCCCHHHHHHHHHC---------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc-------------
Confidence 4789999999888763 356899999999999999999999999888888888765431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
...||.|++..- . -...+|..+.++|+|||+++.....
T Consensus 130 ---------~~~~D~i~~~~~----------~----------------~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 130 ---------EPPFDGVISRAF----------A----------------SLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp ---------CSCEEEEECSCS----------S----------------SHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred ---------cCCcCEEEEecc----------C----------------CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 146999997420 0 0247899999999999999988654
No 105
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.68 E-value=7.1e-05 Score=68.84 Aligned_cols=107 Identities=14% Similarity=0.059 Sum_probs=74.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|+.|.-+..++..- .. |+++|.++..+..++++++..+. ++.+.+.|+..+....
T Consensus 48 ~GcG~G~~~~~l~~~~----------~~-v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~----------- 104 (171)
T 1ws6_A 48 PFAGSGAVGLEAASEG----------WE-AVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEA----------- 104 (171)
T ss_dssp ETCSSCHHHHHHHHTT----------CE-EEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHH-----------
T ss_pred eCCCcCHHHHHHHHCC----------Ce-EEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhh-----------
Confidence 4789999988887641 23 99999999999999999999887 7888888876531000
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE 158 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E 158 (648)
......||.|++|+|.. +. .+ ..... +.+ .++|||||+++.++++.....
T Consensus 105 ------~~~~~~~D~i~~~~~~~--~~---~~---------------~~~~~-~~~-~~~L~~gG~~~~~~~~~~~~~ 154 (171)
T 1ws6_A 105 ------KAQGERFTVAFMAPPYA--MD---LA---------------ALFGE-LLA-SGLVEAGGLYVLQHPKDLYLP 154 (171)
T ss_dssp ------HHTTCCEEEEEECCCTT--SC---TT---------------HHHHH-HHH-HTCEEEEEEEEEEEETTSCCT
T ss_pred ------hccCCceEEEEECCCCc--hh---HH---------------HHHHH-HHh-hcccCCCcEEEEEeCCccCCc
Confidence 00013699999999864 21 00 11111 222 599999999999988875544
No 106
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.68 E-value=0.0003 Score=67.94 Aligned_cols=132 Identities=9% Similarity=-0.026 Sum_probs=87.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-----cEEEeecccccCCCcccCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-----NLIVTNHEAQHFPGCRANKNFS 75 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-----nv~vtn~Da~~~p~~~~~~~~~ 75 (648)
++|++|.-+..+++.. +...|+++|.++.-+...+++++..+.+ ++.+...|+...+.
T Consensus 36 iGcG~G~~~~~l~~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-------- 98 (217)
T 3jwh_A 36 LGCGQGNLLKILLKDS---------FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK-------- 98 (217)
T ss_dssp ETCTTCHHHHHHHHCT---------TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG--------
T ss_pred eCCCCCHHHHHHHhhC---------CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc--------
Confidence 3688999988887642 2468999999999999999988777765 68888887643221
Q ss_pred CCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC-
Q 006372 76 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM- 154 (648)
Q Consensus 76 ~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl- 154 (648)
....||.|++... + ..+. ......+|..+.++|||||.+|.+.+.-
T Consensus 99 -------------~~~~fD~v~~~~~------l-------~~~~-------~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 145 (217)
T 3jwh_A 99 -------------RFHGYDAATVIEV------I-------EHLD-------LSRLGAFERVLFEFAQPKIVIVTTPNIEY 145 (217)
T ss_dssp -------------GGCSCSEEEEESC------G-------GGCC-------HHHHHHHHHHHHTTTCCSEEEEEEEBHHH
T ss_pred -------------cCCCcCEEeeHHH------H-------HcCC-------HHHHHHHHHHHHHHcCCCEEEEEccCccc
Confidence 1257999997432 1 1111 1123578999999999999888776641
Q ss_pred ---------------------CccccHHHHHHHHHhCCCceEEEeCCCc
Q 006372 155 ---------------------NPVENEAVVAEILRKCEGSVELVDVSNE 182 (648)
Q Consensus 155 ---------------------~p~ENEaVV~~~L~~~~g~veLvd~s~~ 182 (648)
++.|=.+-+..++++++-.+++..+...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 146 NVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp HHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEEECCCSCC
T ss_pred chhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEEEEecCCc
Confidence 2333333344777777655555555443
No 107
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.66 E-value=0.00027 Score=69.29 Aligned_cols=94 Identities=15% Similarity=0.090 Sum_probs=73.1
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|++|..+.+++.. .+.|+++|.++.++...+++++.++. +++.+...|......
T Consensus 99 G~G~G~~~~~l~~~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------------- 154 (248)
T 2yvl_A 99 GTGSGALLAVLSEV-----------AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV------------- 154 (248)
T ss_dssp CCTTSHHHHHHHHH-----------SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC-------------
T ss_pred CCCccHHHHHHHHh-----------CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc-------------
Confidence 57789999988776 25899999999999999999999887 678888777654210
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++|+| +| ..+|..+.++|+|||+++..+-+.
T Consensus 155 --------~~~~~D~v~~~~~---------~~------------------~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 155 --------PEGIFHAAFVDVR---------EP------------------WHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp --------CTTCBSEEEECSS---------CG------------------GGGHHHHHHHBCTTCEEEEEESSH
T ss_pred --------CCCcccEEEECCc---------CH------------------HHHHHHHHHHcCCCCEEEEEeCCH
Confidence 0146999999876 12 123788899999999999987654
No 108
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.65 E-value=4.3e-05 Score=81.54 Aligned_cols=138 Identities=14% Similarity=0.078 Sum_probs=89.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
.||++|+.+..+++.+. +...|+|+|+++..+... .++.+.+.|...++.
T Consensus 46 ~gcGtG~~~~~~~~~~~--------~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~~~------------- 95 (421)
T 2ih2_A 46 PACAHGPFLRAFREAHG--------TAYRFVGVEIDPKALDLP---------PWAEGILADFLLWEP------------- 95 (421)
T ss_dssp ETCTTCHHHHHHHHHHC--------SCSEEEEEESCTTTCCCC---------TTEEEEESCGGGCCC-------------
T ss_pred CCCCChHHHHHHHHHhC--------CCCeEEEEECCHHHHHhC---------CCCcEEeCChhhcCc-------------
Confidence 48999999999988752 136899999998876544 467788887655321
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccC-----cccccccCc--chhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKA-----PDIWRKWNV--GLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~-----p~i~~kws~--~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
...||.|+++||....+...+. .+....+.+ ....+...++..++.+++++|++||++++.+++
T Consensus 96 ---------~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 96 ---------GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp ---------SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred ---------cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 1469999999999877653210 111100000 011122446778999999999999999999887
Q ss_pred --CCccccHHHHHHHHHhCCCceEEEeC
Q 006372 154 --MNPVENEAVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 154 --l~p~ENEaVV~~~L~~~~g~veLvd~ 179 (648)
++....+.+.+.+++. +. ..++++
T Consensus 167 ~~l~~~~~~~lr~~l~~~-~~-~~i~~l 192 (421)
T 2ih2_A 167 TWLVLEDFALLREFLARE-GK-TSVYYL 192 (421)
T ss_dssp GGGTCGGGHHHHHHHHHH-SE-EEEEEE
T ss_pred HHhcCccHHHHHHHHHhc-CC-eEEEEC
Confidence 3344455555555554 32 455443
No 109
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.65 E-value=0.00028 Score=68.74 Aligned_cols=103 Identities=13% Similarity=0.165 Sum_probs=75.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|..+..+++.. |...|+++|.++.-+...+.++...+ ++.+...|+..++.
T Consensus 51 iG~G~G~~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~------------- 106 (234)
T 3dtn_A 51 LGAGTGLLSAFLMEKY---------PEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDF------------- 106 (234)
T ss_dssp ETCTTSHHHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCC-------------
T ss_pred ecCCCCHHHHHHHHhC---------CCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCC-------------
Confidence 3689999999998864 35689999999998888877765544 78888888766531
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p 156 (648)
...||.|++... +. .+. ......+|.++.++|||||+++.++.....
T Consensus 107 ---------~~~fD~v~~~~~------l~-------~~~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 107 ---------EEKYDMVVSALS------IH-------HLE-------DEDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp ---------CSCEEEEEEESC------GG-------GSC-------HHHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred ---------CCCceEEEEeCc------cc-------cCC-------HHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 146999998643 11 111 012246899999999999999999876543
No 110
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.64 E-value=0.00035 Score=68.84 Aligned_cols=99 Identities=11% Similarity=0.014 Sum_probs=74.7
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
.|++|.-+.+++... ...|+++|.++..+...+++++..|.. ++.+...|+..++.
T Consensus 44 GcG~G~~~~~la~~~----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------- 100 (256)
T 1nkv_A 44 GSGSGEMLCTWARDH----------GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA------------- 100 (256)
T ss_dssp TCTTCHHHHHHHHHT----------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-------------
T ss_pred CCCCCHHHHHHHHhc----------CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-------------
Confidence 578899998888764 247899999999999999999988874 78888888766431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
...||.|++- +.+..-++ ...+|..+.++|||||+|+.++...
T Consensus 101 ---------~~~fD~V~~~------~~~~~~~~----------------~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 101 ---------NEKCDVAACV------GATWIAGG----------------FAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp ---------SSCEEEEEEE------SCGGGTSS----------------SHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred ---------CCCCCEEEEC------CChHhcCC----------------HHHHHHHHHHHcCCCeEEEEecCcc
Confidence 1569999982 22111111 2567899999999999999987554
No 111
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.64 E-value=0.00019 Score=76.83 Aligned_cols=109 Identities=14% Similarity=0.098 Sum_probs=79.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC---cEEEeecccccCCCcccCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA---NLIVTNHEAQHFPGCRANKNFSSA 77 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~---nv~vtn~Da~~~p~~~~~~~~~~~ 77 (648)
++|+.|.-+..++... |...|+++|.++..+...++++++.+.. ++.+...|+....
T Consensus 229 lGcG~G~~s~~la~~~---------p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~----------- 288 (375)
T 4dcm_A 229 LGCGNGVIGLTLLDKN---------PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV----------- 288 (375)
T ss_dssp ETCTTCHHHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC-----------
T ss_pred EeCcchHHHHHHHHHC---------CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC-----------
Confidence 4789999999998762 3568999999999999999999998865 4666777654310
Q ss_pred CCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcc
Q 006372 78 SDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 157 (648)
Q Consensus 78 ~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ 157 (648)
....||.|++++|...... .... ...+++..+.++|||||+++.++-+..+.
T Consensus 289 -----------~~~~fD~Ii~nppfh~~~~-----------~~~~------~~~~~l~~~~~~LkpgG~l~iv~n~~~~~ 340 (375)
T 4dcm_A 289 -----------EPFRFNAVLCNPPFHQQHA-----------LTDN------VAWEMFHHARRCLKINGELYIVANRHLDY 340 (375)
T ss_dssp -----------CTTCEEEEEECCCC------------------CC------HHHHHHHHHHHHEEEEEEEEEEEETTSCH
T ss_pred -----------CCCCeeEEEECCCcccCcc-----------cCHH------HHHHHHHHHHHhCCCCcEEEEEEECCcCH
Confidence 1257999999999532111 1111 12368999999999999999987666553
No 112
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.63 E-value=0.00023 Score=71.59 Aligned_cols=114 Identities=14% Similarity=0.111 Sum_probs=83.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-+..++.+ +. .|+++|+|+..+...++++++.+.. +.+...|....
T Consensus 128 GcG~G~l~~~la~~----------g~-~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~---------------- 179 (254)
T 2nxc_A 128 GTGSGVLAIAAEKL----------GG-KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA---------------- 179 (254)
T ss_dssp TCTTSHHHHHHHHT----------TC-EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH----------------
T ss_pred cCCCcHHHHHHHHh----------CC-eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc----------------
Confidence 57888877776552 12 8999999999999999999998876 66666664331
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccHH
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEA 161 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENEa 161 (648)
.....||.|+++.+. .....++..+.++|||||+++.|.... +...
T Consensus 180 ------~~~~~fD~Vv~n~~~-------------------------~~~~~~l~~~~~~LkpgG~lils~~~~---~~~~ 225 (254)
T 2nxc_A 180 ------LPFGPFDLLVANLYA-------------------------ELHAALAPRYREALVPGGRALLTGILK---DRAP 225 (254)
T ss_dssp ------GGGCCEEEEEEECCH-------------------------HHHHHHHHHHHHHEEEEEEEEEEEEEG---GGHH
T ss_pred ------CcCCCCCEEEECCcH-------------------------HHHHHHHHHHHHHcCCCCEEEEEeecc---CCHH
Confidence 001469999997541 112578899999999999999987654 4567
Q ss_pred HHHHHHHhCCCceEEEeC
Q 006372 162 VVAEILRKCEGSVELVDV 179 (648)
Q Consensus 162 VV~~~L~~~~g~veLvd~ 179 (648)
-+..++++.| ++++.+
T Consensus 226 ~v~~~l~~~G--f~~~~~ 241 (254)
T 2nxc_A 226 LVREAMAGAG--FRPLEE 241 (254)
T ss_dssp HHHHHHHHTT--CEEEEE
T ss_pred HHHHHHHHCC--CEEEEE
Confidence 7778888765 555443
No 113
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=97.62 E-value=0.00052 Score=65.30 Aligned_cols=103 Identities=13% Similarity=0.143 Sum_probs=77.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|.-+.+++.. +...|+++|.++..+...+++++..+.. ++.+...|+..++.
T Consensus 50 iG~G~G~~~~~l~~~----------~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------------ 107 (219)
T 3dlc_A 50 IGSGPGALSIALAKQ----------SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI------------ 107 (219)
T ss_dssp ETCTTSHHHHHHHHH----------SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS------------
T ss_pred ECCCCCHHHHHHHHc----------CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC------------
Confidence 368899999888775 1469999999999999999999998874 78888888766541
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p 156 (648)
....||.|++... +. .+ .-...+|.++.++|||||+|+.++..-.+
T Consensus 108 ---------~~~~~D~v~~~~~------l~-------~~---------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 153 (219)
T 3dlc_A 108 ---------EDNYADLIVSRGS------VF-------FW---------EDVATAFREIYRILKSGGKTYIGGGFGNK 153 (219)
T ss_dssp ---------CTTCEEEEEEESC------GG-------GC---------SCHHHHHHHHHHHEEEEEEEEEEECCSSH
T ss_pred ---------CcccccEEEECch------Hh-------hc---------cCHHHHHHHHHHhCCCCCEEEEEeccCcH
Confidence 1257999998643 11 01 01245799999999999999998654444
No 114
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.61 E-value=0.00023 Score=68.60 Aligned_cols=95 Identities=17% Similarity=0.148 Sum_probs=72.5
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-+.+++.... +.+.|+++|.++..+...++++.+++.+++.+...|+....
T Consensus 85 G~G~G~~~~~l~~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--------------- 141 (215)
T 2yxe_A 85 GTGCGYHAAVTAEIVG--------EDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY--------------- 141 (215)
T ss_dssp CCTTSHHHHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC---------------
T ss_pred CCCccHHHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC---------------
Confidence 6789999999988752 24689999999999999999999999888888887763311
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
.....||.|+++.++.. + + ..+.++|||||+||.++.+
T Consensus 142 ------~~~~~fD~v~~~~~~~~---------~-----~--------------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 142 ------EPLAPYDRIYTTAAGPK---------I-----P--------------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp ------GGGCCEEEEEESSBBSS---------C-----C--------------HHHHHTEEEEEEEEEEESS
T ss_pred ------CCCCCeeEEEECCchHH---------H-----H--------------HHHHHHcCCCcEEEEEECC
Confidence 01246999999866321 0 0 3678899999999998654
No 115
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.60 E-value=0.00039 Score=67.08 Aligned_cols=134 Identities=9% Similarity=-0.046 Sum_probs=88.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-----cEEEeecccccCCCcccCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-----NLIVTNHEAQHFPGCRANKNFS 75 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-----nv~vtn~Da~~~p~~~~~~~~~ 75 (648)
++|++|.-+..+++.. +...|+++|+++.-+...++++...+.+ ++.+...|+...+.
T Consensus 36 iGcG~G~~~~~l~~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-------- 98 (219)
T 3jwg_A 36 LGCGEGNLLSLLLKDK---------SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK-------- 98 (219)
T ss_dssp ETCTTCHHHHHHHTST---------TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG--------
T ss_pred ecCCCCHHHHHHHhcC---------CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc--------
Confidence 3678898888776532 2468999999999999999888776654 78888887643221
Q ss_pred CCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC-
Q 006372 76 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM- 154 (648)
Q Consensus 76 ~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl- 154 (648)
....||.|++-- ++ ..+.. ....++|..+.++|||||.+|.+.++-
T Consensus 99 -------------~~~~fD~V~~~~------~l-------~~~~~-------~~~~~~l~~~~~~LkpgG~~i~~~~~~~ 145 (219)
T 3jwg_A 99 -------------RFSGYDAATVIE------VI-------EHLDE-------NRLQAFEKVLFEFTRPQTVIVSTPNKEY 145 (219)
T ss_dssp -------------GGTTCSEEEEES------CG-------GGCCH-------HHHHHHHHHHHTTTCCSEEEEEEEBGGG
T ss_pred -------------ccCCCCEEEEHH------HH-------HhCCH-------HHHHHHHHHHHHhhCCCEEEEEccchhh
Confidence 125799999732 11 11110 123578999999999999777766552
Q ss_pred ---------------------CccccHHHHHHHHHhCCCceEEEeCCCcCC
Q 006372 155 ---------------------NPVENEAVVAEILRKCEGSVELVDVSNEVP 184 (648)
Q Consensus 155 ---------------------~p~ENEaVV~~~L~~~~g~veLvd~s~~lP 184 (648)
.+.|=..-+..++++++-.+++..+....|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~~~ 196 (219)
T 3jwg_A 146 NFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQIGEIDD 196 (219)
T ss_dssp GGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEEESCCCT
T ss_pred hhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEEecCCccc
Confidence 222222333467777776677766655544
No 116
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.59 E-value=0.00055 Score=67.43 Aligned_cols=99 Identities=14% Similarity=0.131 Sum_probs=74.6
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|..+.++++. .+.|+++|.++..+...+++++..+.+++.+...|+..+|.
T Consensus 29 GcG~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-------------- 83 (239)
T 1xxl_A 29 GAGAGHTALAFSPY-----------VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPF-------------- 83 (239)
T ss_dssp SCTTSHHHHHHGGG-----------SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCS--------------
T ss_pred ccCcCHHHHHHHHh-----------CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCC--------------
Confidence 67889888877653 24899999999999999999999998899888888766541
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++... + ..|. + ...+|.++.++|||||+++.++...
T Consensus 84 -------~~~~fD~v~~~~~------l-------~~~~--~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 84 -------PDDSFDIITCRYA------A-------HHFS--D-------VRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp -------CTTCEEEEEEESC------G-------GGCS--C-------HHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred -------CCCcEEEEEECCc------h-------hhcc--C-------HHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 1156999998532 1 1111 1 1467899999999999999987654
No 117
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=97.59 E-value=0.0002 Score=78.01 Aligned_cols=70 Identities=16% Similarity=0.049 Sum_probs=57.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|+.|..|..|+.. ...|+++|.++.-++..+++++..+.. +.+...|+..++.
T Consensus 297 lgcG~G~~sl~la~~-----------~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~------------- 351 (425)
T 2jjq_A 297 MYSGVGTFGIYLAKR-----------GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV------------- 351 (425)
T ss_dssp ETCTTTHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC-------------
T ss_pred eeccchHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc-------------
Confidence 479999999988763 258999999999999999999999887 8888888765421
Q ss_pred CcccccccccccccEEEEcCCCCCC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGD 105 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGd 105 (648)
..||.|++|+|.+|.
T Consensus 352 ----------~~fD~Vv~dPPr~g~ 366 (425)
T 2jjq_A 352 ----------KGFDTVIVDPPRAGL 366 (425)
T ss_dssp ----------TTCSEEEECCCTTCS
T ss_pred ----------cCCCEEEEcCCccch
Confidence 169999999997543
No 118
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.57 E-value=0.00031 Score=69.00 Aligned_cols=97 Identities=21% Similarity=0.222 Sum_probs=70.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+.+++... +.+.|+++|.++..+..+++++++. +|+.+...|+..... ..
T Consensus 81 lGcG~G~~~~~la~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~-~~---------- 138 (230)
T 1fbn_A 81 LGASAGTTPSHVADIA---------DKGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQE-YA---------- 138 (230)
T ss_dssp ESCCSSHHHHHHHHHT---------TTSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGG-GT----------
T ss_pred EcccCCHHHHHHHHHc---------CCcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCccc-cc----------
Confidence 3688999999998874 2479999999999999998887655 688888888765110 00
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEe
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYS 150 (648)
.. ...||.|+.|++ +|+ .-..+|..+.++|||||+++.+
T Consensus 139 ------~~-~~~~D~v~~~~~---------~~~---------------~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 139 ------NI-VEKVDVIYEDVA---------QPN---------------QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ------TT-SCCEEEEEECCC---------STT---------------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------cc-CccEEEEEEecC---------Chh---------------HHHHHHHHHHHhCCCCcEEEEE
Confidence 00 146999997764 111 1134588899999999999887
No 119
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.57 E-value=0.00084 Score=63.80 Aligned_cols=99 Identities=13% Similarity=0.059 Sum_probs=72.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..++.. ...|+++|.++..+..+++++...+. ++.+...|+..++.
T Consensus 36 iGcG~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~------------- 90 (202)
T 2kw5_A 36 LAEGEGRNACFLASL-----------GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDI------------- 90 (202)
T ss_dssp CCCSCTHHHHHHHTT-----------TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSC-------------
T ss_pred ECCCCCHhHHHHHhC-----------CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCC-------------
Confidence 367889888777553 24899999999999999999888776 77777777665431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++- . .. +. ......+|..+.++|||||+++.++.+.
T Consensus 91 --------~~~~fD~v~~~-~----~~----------~~-------~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 91 --------VADAWEGIVSI-F----CH----------LP-------SSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp --------CTTTCSEEEEE-C----CC----------CC-------HHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred --------CcCCccEEEEE-h----hc----------CC-------HHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 11569999972 1 11 11 1234678999999999999999998654
No 120
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.57 E-value=0.00014 Score=71.74 Aligned_cols=114 Identities=14% Similarity=0.088 Sum_probs=77.4
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccC-CCcccCCCCCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHF-PGCRANKNFSSASD 79 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~-p~~~~~~~~~~~~~ 79 (648)
+|+.|.-|..++..+. +.+.|+++|.++..+...++++++.|..+ +.+...|+..+ +.+...... .
T Consensus 68 G~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~-~--- 135 (239)
T 2hnk_A 68 GTFTGYSSLCFASALP--------EDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSA-P--- 135 (239)
T ss_dssp CCTTCHHHHHHHHHSC--------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSC-C---
T ss_pred eCCCCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccc-c---
Confidence 6789999999988752 14799999999999999999999999865 88888886542 111000000 0
Q ss_pred cCccccccccc--ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 80 KGIESESNMGQ--LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 80 ~~~~~~~~~~~--~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
.. ...... ..||.|++|.. .+ . ...+|..+.++|+|||+||..++...
T Consensus 136 --~~-~~~f~~~~~~fD~I~~~~~---------~~------------~----~~~~l~~~~~~L~pgG~lv~~~~~~~ 185 (239)
T 2hnk_A 136 --SW-ASDFAFGPSSIDLFFLDAD---------KE------------N----YPNYYPLILKLLKPGGLLIADNVLWD 185 (239)
T ss_dssp --GG-GTTTCCSTTCEEEEEECSC---------GG------------G----HHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred --cc-cccccCCCCCcCEEEEeCC---------HH------------H----HHHHHHHHHHHcCCCeEEEEEccccC
Confidence 00 000111 46999999852 00 0 12568889999999999999986543
No 121
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.56 E-value=0.00011 Score=73.37 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=75.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHH------hCCCcEEEeeccccc-CCCcccCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR------MCTANLIVTNHEAQH-FPGCRANKN 73 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkR------lg~~nv~vtn~Da~~-~p~~~~~~~ 73 (648)
++|+.|.-+.+|+... |...|+++|++...+...+.+++. .+..|+.+...|+.. ++..
T Consensus 53 iGcG~G~~~~~la~~~---------p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~----- 118 (235)
T 3ckk_A 53 IGCGYGGLLVELSPLF---------PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNF----- 118 (235)
T ss_dssp ETCTTCHHHHHHGGGS---------TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHH-----
T ss_pred EccCCcHHHHHHHHHC---------CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhh-----
Confidence 3688999999887642 356899999999999998888765 356789999999865 2210
Q ss_pred CCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 74 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
.....||+|++..| +-|.+-.. . .-.-.|..+|..+.++|||||+|+.+|+.
T Consensus 119 --------------~~~~~~D~v~~~~~-----------dp~~k~~h-~--krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 119 --------------FYKGQLTKMFFLFP-----------DPHFKRTK-H--KWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp --------------CCTTCEEEEEEESC-----------C--------------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred --------------CCCcCeeEEEEeCC-----------Cchhhhhh-h--hhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 01256999988654 22221000 0 00012457899999999999999998864
No 122
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.53 E-value=0.00068 Score=65.38 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=73.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-----cEEEeecccccCCCcccCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-----NLIVTNHEAQHFPGCRANKNFS 75 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-----nv~vtn~Da~~~p~~~~~~~~~ 75 (648)
++|++|.-+..++.. ...|+++|+++..+...+.++...+.. ++.+...|+..++.
T Consensus 37 iG~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 97 (235)
T 3sm3_A 37 IGCGSGKISLELASK-----------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF-------- 97 (235)
T ss_dssp ETCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS--------
T ss_pred ECCCCCHHHHHHHhC-----------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC--------
Confidence 368899988888764 248999999999999998887776652 56777777665431
Q ss_pred CCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 76 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 76 ~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
....||.|++... +..-++ .....++|..+.++|||||+|+.++....
T Consensus 98 -------------~~~~~D~v~~~~~------l~~~~~-------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 98 -------------HDSSFDFAVMQAF------LTSVPD-------------PKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp -------------CTTCEEEEEEESC------GGGCCC-------------HHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred -------------CCCceeEEEEcch------hhcCCC-------------HHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 1257999998532 211111 11234689999999999999999987653
No 123
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.51 E-value=0.0012 Score=66.56 Aligned_cols=117 Identities=15% Similarity=0.076 Sum_probs=88.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+|+++|--+..++.. .+.+.|+|+|+++.-+...++|++++|..+ +.+...|+...+.
T Consensus 28 IGtGsG~l~i~la~~---------~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~------------ 86 (230)
T 3lec_A 28 VGSDHAYLPIFLLQM---------GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE------------ 86 (230)
T ss_dssp ETCSTTHHHHHHHHT---------TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC------------
T ss_pred ECCchHHHHHHHHHh---------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc------------
Confidence 488899988888664 135789999999999999999999999864 8888888654211
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVEN 159 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~EN 159 (648)
....||.|++ .|.|- .+=.+||..+...|+++|++|-|.- .+
T Consensus 87 ---------~~~~~D~Ivi----aGmGg--------------------~lI~~IL~~~~~~l~~~~~lIlqp~-----~~ 128 (230)
T 3lec_A 87 ---------EADNIDTITI----CGMGG--------------------RLIADILNNDIDKLQHVKTLVLQPN-----NR 128 (230)
T ss_dssp ---------GGGCCCEEEE----EEECH--------------------HHHHHHHHHTGGGGTTCCEEEEEES-----SC
T ss_pred ---------cccccCEEEE----eCCch--------------------HHHHHHHHHHHHHhCcCCEEEEECC-----CC
Confidence 0136999886 23332 2335689999999999999998762 46
Q ss_pred HHHHHHHHHhCCCceEEEe
Q 006372 160 EAVVAEILRKCEGSVELVD 178 (648)
Q Consensus 160 EaVV~~~L~~~~g~veLvd 178 (648)
+..|..+|.+++ |.+++
T Consensus 129 ~~~lr~~L~~~G--f~i~~ 145 (230)
T 3lec_A 129 EDDLRKWLAAND--FEIVA 145 (230)
T ss_dssp HHHHHHHHHHTT--EEEEE
T ss_pred hHHHHHHHHHCC--CEEEE
Confidence 888888898875 55544
No 124
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.47 E-value=0.00049 Score=67.25 Aligned_cols=123 Identities=14% Similarity=0.124 Sum_probs=84.4
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhC-CCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC-TANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg-~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|+.|.-+..++. +...|+++|+++.-+...++++...+ ..++.+...|+..++.
T Consensus 74 GcG~G~~~~~l~~-----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------- 129 (235)
T 3lcc_A 74 GCGGGHDVVAMAS-----------PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP------------- 129 (235)
T ss_dssp TCTTCHHHHHHCB-----------TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC-------------
T ss_pred CCCCCHHHHHHHh-----------CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC-------------
Confidence 6788888877643 24689999999999999988877654 3568888888766431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc--
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE-- 158 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E-- 158 (648)
...||.|++-.. +- .+.+. ....+|.++.++|||||+|+..+.+.....
T Consensus 130 ---------~~~fD~v~~~~~------l~-------~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 180 (235)
T 3lcc_A 130 ---------TELFDLIFDYVF------FC-------AIEPE-------MRPAWAKSMYELLKPDGELITLMYPITDHVGG 180 (235)
T ss_dssp ---------SSCEEEEEEESS------TT-------TSCGG-------GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSC
T ss_pred ---------CCCeeEEEEChh------hh-------cCCHH-------HHHHHHHHHHHHCCCCcEEEEEEecccccCCC
Confidence 146999997321 11 11111 134678999999999999998776554322
Q ss_pred -----cHHHHHHHHHhCCCceEEEeC
Q 006372 159 -----NEAVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 159 -----NEaVV~~~L~~~~g~veLvd~ 179 (648)
..+-+..+|++.| |+++.+
T Consensus 181 ~~~~~~~~~~~~~l~~~G--f~~~~~ 204 (235)
T 3lcc_A 181 PPYKVDVSTFEEVLVPIG--FKAVSV 204 (235)
T ss_dssp SSCCCCHHHHHHHHGGGT--EEEEEE
T ss_pred CCccCCHHHHHHHHHHcC--CeEEEE
Confidence 4677888888765 555444
No 125
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.46 E-value=0.00029 Score=68.58 Aligned_cols=92 Identities=15% Similarity=0.107 Sum_probs=69.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|..+.+++... +.|+++|.++..+..+++++...+ ++.+...|+.....
T Consensus 77 iG~G~G~~~~~l~~~~-----------~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~------------- 130 (231)
T 1vbf_A 77 IGTGIGYYTALIAEIV-----------DKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYE------------- 130 (231)
T ss_dssp ECCTTSHHHHHHHHHS-----------SEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCG-------------
T ss_pred EcCCCCHHHHHHHHHc-----------CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccc-------------
Confidence 3688999999887752 589999999999999999887776 78888887654110
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|+++.++... ...+.++|||||+||.++.+-
T Consensus 131 --------~~~~fD~v~~~~~~~~~----------------------------~~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 131 --------EEKPYDRVVVWATAPTL----------------------------LCKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp --------GGCCEEEEEESSBBSSC----------------------------CHHHHHTEEEEEEEEEEECSS
T ss_pred --------cCCCccEEEECCcHHHH----------------------------HHHHHHHcCCCcEEEEEEcCC
Confidence 12569999998764211 124677999999999997654
No 126
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.46 E-value=0.00016 Score=81.21 Aligned_cols=141 Identities=12% Similarity=-0.009 Sum_probs=89.9
Q ss_pred CcccchHHHHHHHHHHhcCCCC-CCC--------CCEEEEEEcCChHHHHHHHHHHHHhCCCc-----EEEeecccccCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNP-GAL--------PNGMVIANDLDVQRCNLLIHQTKRMCTAN-----LIVTNHEAQHFP 66 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~-~~~--------~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-----v~vtn~Da~~~p 66 (648)
.||++|+...+++..+...... +.. ....|+++|+++.-+.+.+.++...|..+ +.+.+.|+...+
T Consensus 176 PaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~ 255 (541)
T 2ar0_A 176 PAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSD 255 (541)
T ss_dssp TTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHH
T ss_pred CCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCcccc
Confidence 4899999999999887642100 000 01369999999999999998887777654 555666643311
Q ss_pred CcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcE
Q 006372 67 GCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGR 146 (648)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~ 146 (648)
. .....||.|+.+||.++........+ +... -...+...|.+++++||+||+
T Consensus 256 ~--------------------~~~~~fD~Vv~NPPf~~~~~~~~~~~----~~~~----~~~~~~~Fl~~~l~~Lk~gGr 307 (541)
T 2ar0_A 256 G--------------------ENLPKAHIVATNPPFGSAAGTNITRT----FVHP----TSNKQLCFMQHIIETLHPGGR 307 (541)
T ss_dssp H--------------------HTSCCEEEEEECCCCTTCSSCCCCSC----CSSC----CSCHHHHHHHHHHHHEEEEEE
T ss_pred c--------------------ccccCCeEEEECCCcccccchhhHhh----cCCC----CCchHHHHHHHHHHHhCCCCE
Confidence 0 11257999999999998765331111 1110 112356789999999999999
Q ss_pred EEEeccc--CCccccHHHHHHHHHh
Q 006372 147 IVYSTCS--MNPVENEAVVAEILRK 169 (648)
Q Consensus 147 LVYSTCS--l~p~ENEaVV~~~L~~ 169 (648)
+++.+.. |+....+..+...|.+
T Consensus 308 ~a~V~p~~~L~~~~~~~~iR~~L~~ 332 (541)
T 2ar0_A 308 AAVVVPDNVLFEGGKGTDIRRDLMD 332 (541)
T ss_dssp EEEEEEHHHHHCCTHHHHHHHHHHH
T ss_pred EEEEecCcceecCcHHHHHHHHHhh
Confidence 9888653 3333334555444433
No 127
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.45 E-value=0.00011 Score=75.37 Aligned_cols=103 Identities=16% Similarity=0.094 Sum_probs=73.9
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh-----------CCCcEEEeecccccCCCccc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-----------CTANLIVTNHEAQHFPGCRA 70 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl-----------g~~nv~vtn~Da~~~p~~~~ 70 (648)
+++.|+-+..++.. +.+.|+++|+|+..++..++++ ++ ..+++.+...|+..+..
T Consensus 83 G~G~G~~~~~l~~~----------~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~--- 148 (281)
T 1mjf_A 83 GGGDGGTVREVLQH----------DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIK--- 148 (281)
T ss_dssp ECTTSHHHHHHTTS----------CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHH---
T ss_pred cCCcCHHHHHHHhC----------CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhc---
Confidence 67888888777543 2468999999999999999887 54 34678888888765411
Q ss_pred CCCCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEe
Q 006372 71 NKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYS 150 (648)
. ...||.|++|+|+. .|. + ..| .+.+++..+.++|+|||++|..
T Consensus 149 -----------------~-~~~fD~Ii~d~~~~-~~~----~-----------~~l--~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 149 -----------------N-NRGFDVIIADSTDP-VGP----A-----------KVL--FSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp -----------------H-CCCEEEEEEECCCC-C--------------------T--TSHHHHHHHHHHEEEEEEEEEE
T ss_pred -----------------c-cCCeeEEEECCCCC-CCc----c-----------hhh--hHHHHHHHHHHhcCCCcEEEEE
Confidence 0 25699999999852 111 0 001 2456788999999999999999
Q ss_pred cccC
Q 006372 151 TCSM 154 (648)
Q Consensus 151 TCSl 154 (648)
+++.
T Consensus 193 ~~~~ 196 (281)
T 1mjf_A 193 AGSV 196 (281)
T ss_dssp EEET
T ss_pred cCCc
Confidence 8774
No 128
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.43 E-value=0.00024 Score=73.61 Aligned_cols=106 Identities=11% Similarity=0.080 Sum_probs=73.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh-----CCCcEEEeecccccCCCcccCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-----CTANLIVTNHEAQHFPGCRANKNFS 75 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl-----g~~nv~vtn~Da~~~p~~~~~~~~~ 75 (648)
++++.|+-+..++.. .+...|+++|+|+.-+++.++++..+ ..+++.+...|+..+...
T Consensus 90 iG~G~G~~~~~l~~~---------~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~------- 153 (294)
T 3adn_A 90 IGGGDGAMLREVTRH---------KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ------- 153 (294)
T ss_dssp ESCTTCHHHHHHHTC---------TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C-------
T ss_pred EeCChhHHHHHHHhC---------CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh-------
Confidence 367888887776542 13468999999999999999988775 346888899998765321
Q ss_pred CCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 76 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 76 ~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
....||.|++|++.. .| |. -+-.+.+++..+.+.|+|||++|..++|
T Consensus 154 -------------~~~~fDvIi~D~~~p-~~-----~~------------~~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 154 -------------TSQTFDVIISDCTDP-IG-----PG------------ESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp -------------CCCCEEEEEECC----------------------------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred -------------cCCCccEEEECCCCc-cC-----cc------------hhccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 125799999998731 11 10 0112356788999999999999988776
No 129
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.43 E-value=0.00029 Score=67.31 Aligned_cols=111 Identities=9% Similarity=0.001 Sum_probs=76.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|+.|.-+..++.. +.+.|+++|+++..+...++++. ++.+...|+..+|
T Consensus 58 ~gcG~G~~~~~l~~~----------~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~-------------- 108 (200)
T 1ne2_A 58 AGTGNGILACGSYLL----------GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS-------------- 108 (200)
T ss_dssp ETCTTCHHHHHHHHT----------TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC--------------
T ss_pred EeCCccHHHHHHHHc----------CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC--------------
Confidence 478999988888664 13579999999999988887764 5677777765532
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
..||.|++|+|-. .|.. .....+|.++++.+ |+ +|+.|.. ...
T Consensus 109 ----------~~~D~v~~~~p~~-------------~~~~-------~~~~~~l~~~~~~~--g~--~~~~~~~---~~~ 151 (200)
T 1ne2_A 109 ----------GKYDTWIMNPPFG-------------SVVK-------HSDRAFIDKAFETS--MW--IYSIGNA---KAR 151 (200)
T ss_dssp ----------CCEEEEEECCCC---------------------------CHHHHHHHHHHE--EE--EEEEEEG---GGH
T ss_pred ----------CCeeEEEECCCch-------------hccC-------chhHHHHHHHHHhc--Cc--EEEEEcC---chH
Confidence 3599999999831 1111 11245688888887 33 8888843 456
Q ss_pred HHHHHHHHhCCCceEEEe
Q 006372 161 AVVAEILRKCEGSVELVD 178 (648)
Q Consensus 161 aVV~~~L~~~~g~veLvd 178 (648)
+.+..+++..+ .++.+.
T Consensus 152 ~~~~~~~~~~g-~~~~~~ 168 (200)
T 1ne2_A 152 DFLRREFSARG-DVFREE 168 (200)
T ss_dssp HHHHHHHHHHE-EEEEEE
T ss_pred HHHHHHHHHCC-CEEEEE
Confidence 67777787776 666554
No 130
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.43 E-value=7e-05 Score=76.98 Aligned_cols=114 Identities=19% Similarity=0.223 Sum_probs=76.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|..|.+|++. .+.|+|+|+|+.-+..+++++...+. +++.+.+.|+..++.
T Consensus 35 iG~G~G~lt~~L~~~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~------------ 91 (285)
T 1zq9_A 35 VGPGTGNMTVKLLEK-----------AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL------------ 91 (285)
T ss_dssp ECCTTSTTHHHHHHH-----------SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC------------
T ss_pred EcCcccHHHHHHHhh-----------CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc------------
Confidence 368999999999875 25899999999999999988877665 689999998766421
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
..||.|+++.|+....-+-.+ +. ...+.-...+..+|+++..| ..++|||.+ |+++|+
T Consensus 92 -----------~~fD~vv~nlpy~~~~~~~~~--~l-~~~~~~~~~~~m~qkEva~r--~vlkPGg~~-y~~lsv 149 (285)
T 1zq9_A 92 -----------PFFDTCVANLPYQISSPFVFK--LL-LHRPFFRCAILMFQREFALR--LVAKPGDKL-YCRLSI 149 (285)
T ss_dssp -----------CCCSEEEEECCGGGHHHHHHH--HH-HCSSCCSEEEEEEEHHHHHH--HHCCTTCTT-CSHHHH
T ss_pred -----------hhhcEEEEecCcccchHHHHH--HH-hcCcchhhhhhhhhHHHHHH--HhcCCCCcc-cchhhh
Confidence 258999999997543211000 00 00000001122245555543 268999996 999997
No 131
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.43 E-value=0.00014 Score=71.68 Aligned_cols=106 Identities=16% Similarity=0.105 Sum_probs=72.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..++.. +...|+++|.++.-+...+++.++.+ .++.+...|+..+..
T Consensus 67 iGcGtG~~~~~l~~~----------~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~------------- 122 (236)
T 1zx0_A 67 VGFGMAIAASKVQEA----------PIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAP------------- 122 (236)
T ss_dssp ECCTTSHHHHHHHTS----------CEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGG-------------
T ss_pred EeccCCHHHHHHHhc----------CCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhc-------------
Confidence 368899888877442 23489999999999999988877666 678888888765410
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
......||.|++|.-+ . . ...+. ......+|.++.++|||||++++..++
T Consensus 123 ------~~~~~~fD~V~~d~~~--~-~-------~~~~~-------~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 123 ------TLPDGHFDGILYDTYP--L-S-------EETWH-------THQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp ------GSCTTCEEEEEECCCC--C-B-------GGGTT-------THHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ------ccCCCceEEEEECCcc--c-c-------hhhhh-------hhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 0112569999998211 0 0 01111 112346789999999999999998766
No 132
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=97.41 E-value=0.00078 Score=63.34 Aligned_cols=97 Identities=14% Similarity=-0.003 Sum_probs=72.2
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|+.|.-+.++++. ...|+++|.++..+..++++++..+.+++.+...|+..++.
T Consensus 40 G~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-------------- 94 (199)
T 2xvm_A 40 GCGNGRNSLYLAAN-----------GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-------------- 94 (199)
T ss_dssp TCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC--------------
T ss_pred cCCCCHHHHHHHHC-----------CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC--------------
Confidence 67889988888664 24899999999999999999998888888888888766431
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
...||.|++... +. .+.+. ....+|..+.++|||||+++..+
T Consensus 95 --------~~~~D~v~~~~~------l~-------~~~~~-------~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 95 --------DRQYDFILSTVV------LM-------FLEAK-------TIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp --------CCCEEEEEEESC------GG-------GSCGG-------GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred --------CCCceEEEEcch------hh-------hCCHH-------HHHHHHHHHHHhcCCCeEEEEEE
Confidence 156999997543 11 11111 12567899999999999977643
No 133
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.41 E-value=0.00062 Score=71.43 Aligned_cols=107 Identities=12% Similarity=0.089 Sum_probs=79.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|+.|.-+..++... +.+.|+++|.++..+...++++...+.. +.+...|...++
T Consensus 203 lGcG~G~~~~~la~~~---------~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~~-------------- 258 (343)
T 2pjd_A 203 VGCGAGVLSVAFARHS---------PKIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSEV-------------- 258 (343)
T ss_dssp TTCTTSHHHHHHHHHC---------TTCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTC--------------
T ss_pred ecCccCHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEccccccc--------------
Confidence 4789999999887752 3468999999999999999999888765 344555543321
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 157 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ 157 (648)
...||.|++++|.. .|. ..-.....++|..+.++|||||+++..+.+..+.
T Consensus 259 ---------~~~fD~Iv~~~~~~-~g~----------------~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 309 (343)
T 2pjd_A 259 ---------KGRFDMIISNPPFH-DGM----------------QTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPY 309 (343)
T ss_dssp ---------CSCEEEEEECCCCC-SSS----------------HHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSH
T ss_pred ---------cCCeeEEEECCCcc-cCc----------------cCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCc
Confidence 14699999998842 111 0012345678999999999999999999887663
No 134
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.41 E-value=0.00072 Score=67.58 Aligned_cols=99 Identities=16% Similarity=0.142 Sum_probs=76.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..++... |.+.|+++|.++.-+...+.++...+.+++.+...|+..++.
T Consensus 44 iG~G~G~~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~------------- 101 (276)
T 3mgg_A 44 AGCGIGAQTVILAKNN---------PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPF------------- 101 (276)
T ss_dssp TTCTTSHHHHHHHHHC---------TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCS-------------
T ss_pred ecCCCCHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCC-------------
Confidence 4789999999888762 357899999999999999999999998899999888776541
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
....||.|++... +..-++. ..+|..+.++|||||+++..+
T Consensus 102 --------~~~~fD~v~~~~~------l~~~~~~----------------~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 102 --------EDSSFDHIFVCFV------LEHLQSP----------------EEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp --------CTTCEEEEEEESC------GGGCSCH----------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred --------CCCCeeEEEEech------hhhcCCH----------------HHHHHHHHHHcCCCcEEEEEE
Confidence 1257999998432 1111110 267888999999999999976
No 135
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.40 E-value=0.0015 Score=65.01 Aligned_cols=100 Identities=16% Similarity=0.171 Sum_probs=74.7
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
.|++|.-+.++++.. .+.|+++|.++..+...+++++..+.. ++.+...|+..+|.
T Consensus 69 GcG~G~~~~~l~~~~----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------------- 125 (273)
T 3bus_A 69 GCGIGKPAVRLATAR----------DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF------------- 125 (273)
T ss_dssp SCTTSHHHHHHHHHS----------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-------------
T ss_pred CCCCCHHHHHHHHhc----------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC-------------
Confidence 578899998887752 358999999999999999999888875 68888888766431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++--. +..-++ ...+|.++.++|||||+|+.++...
T Consensus 126 --------~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 126 --------EDASFDAVWALES------LHHMPD----------------RGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp --------CTTCEEEEEEESC------TTTSSC----------------HHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred --------CCCCccEEEEech------hhhCCC----------------HHHHHHHHHHHcCCCeEEEEEEeec
Confidence 1156999997321 111111 1467999999999999999988654
No 136
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.39 E-value=0.0006 Score=65.53 Aligned_cols=123 Identities=20% Similarity=0.213 Sum_probs=81.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|..+..+++. ...|+++|+++.-+...++++... +++.+...|+..++.
T Consensus 58 iGcG~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~------------- 111 (216)
T 3ofk_A 58 IGCAAGAFTEKLAPH-----------CKRLTVIDVMPRAIGRACQRTKRW--SHISWAATDILQFST------------- 111 (216)
T ss_dssp ECCTTSHHHHHHGGG-----------EEEEEEEESCHHHHHHHHHHTTTC--SSEEEEECCTTTCCC-------------
T ss_pred EcCCCCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHhcccC--CCeEEEEcchhhCCC-------------
Confidence 368899888877553 258999999999888888776654 378888888766531
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc------cC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC------SM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC------Sl 154 (648)
...||.|++.. ++..-++ .....++|.++.++|||||+++.+|. +.
T Consensus 112 ---------~~~fD~v~~~~------~l~~~~~-------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~ 163 (216)
T 3ofk_A 112 ---------AELFDLIVVAE------VLYYLED-------------MTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRW 163 (216)
T ss_dssp ---------SCCEEEEEEES------CGGGSSS-------------HHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHT
T ss_pred ---------CCCccEEEEcc------HHHhCCC-------------HHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhh
Confidence 15699999842 2211111 11235679999999999999999872 23
Q ss_pred CccccHHHHHHHHHhCCCceEEE
Q 006372 155 NPVENEAVVAEILRKCEGSVELV 177 (648)
Q Consensus 155 ~p~ENEaVV~~~L~~~~g~veLv 177 (648)
....+...+..++...-..++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~e~~ 186 (216)
T 3ofk_A 164 GHVAGAETVITILTEALTEVERV 186 (216)
T ss_dssp TCSCCHHHHHHHHHHHSEEEEEE
T ss_pred hhhhhHHHHHHHHHhhccceEEE
Confidence 33455556666665433334433
No 137
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=97.39 E-value=0.00049 Score=70.53 Aligned_cols=104 Identities=16% Similarity=0.078 Sum_probs=75.8
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|.-+.+++... .+.+.|+++|+++..+...++++.+.+..+ +.+...|+..+|.
T Consensus 125 iGcG~G~~~~~la~~~--------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------ 184 (305)
T 3ocj_A 125 VPCGWMSELLALDYSA--------CPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT------------ 184 (305)
T ss_dssp TTCTTCHHHHTSCCTT--------CTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC------------
T ss_pred ecCCCCHHHHHHHHhc--------CCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc------------
Confidence 4678888877764221 246799999999999999999998888764 8888888776531
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
. ..||.|++..+ +-.-|+ ...+..+|..+.++|||||+|+.++.+
T Consensus 185 ---------~-~~fD~v~~~~~------~~~~~~-------------~~~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 185 ---------R-EGYDLLTSNGL------NIYEPD-------------DARVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp ---------C-SCEEEEECCSS------GGGCCC-------------HHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ---------c-CCeEEEEECCh------hhhcCC-------------HHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 1 56999997432 111111 123456899999999999999998844
No 138
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.38 E-value=0.00072 Score=66.58 Aligned_cols=102 Identities=10% Similarity=0.060 Sum_probs=73.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+.+++... ...|+++|.++..+...++++... +++.+...|+..+|.
T Consensus 62 iG~G~G~~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~------------- 116 (266)
T 3ujc_A 62 IGSGLGGGCMYINEKY----------GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEF------------- 116 (266)
T ss_dssp ETCTTSHHHHHHHHHH----------CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCC-------------
T ss_pred ECCCCCHHHHHHHHHc----------CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCC-------------
Confidence 3678999999998865 258999999998888777665443 678888888766531
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
....||.|++... +. .+. ..-...+|..+.++|||||+++.++.+..
T Consensus 117 --------~~~~fD~v~~~~~------l~-------~~~-------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 117 --------PENNFDLIYSRDA------IL-------ALS-------LENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp --------CTTCEEEEEEESC------GG-------GSC-------HHHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred --------CCCcEEEEeHHHH------HH-------hcC-------hHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 1257999997422 11 111 12335789999999999999999986543
No 139
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.38 E-value=0.00062 Score=65.56 Aligned_cols=101 Identities=15% Similarity=0.090 Sum_probs=73.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..++.. ...|+++|.++.-+...+++++..+ .++.+...|+..++.
T Consensus 45 lG~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~------------- 99 (227)
T 1ve3_A 45 LACGVGGFSFLLEDY-----------GFEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSF------------- 99 (227)
T ss_dssp ETCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCS-------------
T ss_pred EeccCCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCC-------------
Confidence 368899888777653 1289999999999999999988877 678888888765431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++..+.. . +.. .-...+|.++.++|||||+++..++..
T Consensus 100 --------~~~~~D~v~~~~~~~----------~---~~~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 100 --------EDKTFDYVIFIDSIV----------H---FEP-------LELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp --------CTTCEEEEEEESCGG----------G---CCH-------HHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred --------CCCcEEEEEEcCchH----------h---CCH-------HHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 014699999875410 0 011 112568899999999999999988753
No 140
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=97.37 E-value=0.0013 Score=67.04 Aligned_cols=109 Identities=14% Similarity=0.026 Sum_probs=79.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|+-+.++++.. + ..|+++|+++..+...+++++..|.+ ++.+...|+..+
T Consensus 79 iGcG~G~~~~~la~~~---------~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-------------- 134 (302)
T 3hem_A 79 IGCGWGSTMRHAVAEY---------D-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-------------- 134 (302)
T ss_dssp ETCTTSHHHHHHHHHH---------C-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--------------
T ss_pred eeccCcHHHHHHHHhC---------C-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--------------
Confidence 3688999999998864 1 57999999999999999999999886 788888887553
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p 156 (648)
...||.|++- +++..-|+.+..-. ......+|..+.++|||||+++.++.+...
T Consensus 135 ----------~~~fD~v~~~------~~~~~~~d~~~~~~-------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 135 ----------DEPVDRIVSL------GAFEHFADGAGDAG-------FERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp ----------CCCCSEEEEE------SCGGGTTCCSSCCC-------TTHHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred ----------CCCccEEEEc------chHHhcCccccccc-------hhHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 1569999975 22322222110000 022356899999999999999999887643
No 141
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.37 E-value=0.00049 Score=67.71 Aligned_cols=93 Identities=16% Similarity=0.159 Sum_probs=69.9
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-+.+++... + +.|+++|.++..+...+.++++++..++.+...|+.. + +
T Consensus 99 G~G~G~~~~~la~~~---------~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~---~----------- 153 (235)
T 1jg1_A 99 GTGSGWNAALISEIV---------K-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK-G---F----------- 153 (235)
T ss_dssp CCTTSHHHHHHHHHH---------C-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-C---C-----------
T ss_pred eCCcCHHHHHHHHHh---------C-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc-C---C-----------
Confidence 578999999998874 2 5799999999999999999999998888888877621 1 0
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
.....||.|+++.++.. + ...+.++|+|||+||.++-.
T Consensus 154 ------~~~~~fD~Ii~~~~~~~---------~-------------------~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 154 ------PPKAPYDVIIVTAGAPK---------I-------------------PEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp ------GGGCCEEEEEECSBBSS---------C-------------------CHHHHHTEEEEEEEEEEECS
T ss_pred ------CCCCCccEEEECCcHHH---------H-------------------HHHHHHhcCCCcEEEEEEec
Confidence 01135999999866311 0 12467899999999988643
No 142
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.35 E-value=0.0009 Score=65.73 Aligned_cols=119 Identities=16% Similarity=0.007 Sum_probs=82.5
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-+..+++.. .+.|+++|.++..+...++++...+..++.+...|+..++.
T Consensus 87 GcG~G~~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-------------- 142 (241)
T 2ex4_A 87 GAGIGRITKRLLLPL----------FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP-------------- 142 (241)
T ss_dssp TCTTTHHHHHTTTTT----------CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC--------------
T ss_pred CCCCCHHHHHHHHhc----------CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC--------------
Confidence 678888887765532 34899999999999999888777655567788787665431
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc-----
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP----- 156 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p----- 156 (648)
....||.|+++.. +..-++ .....+|..+.++|||||+|+.++.....
T Consensus 143 -------~~~~fD~v~~~~~------l~~~~~--------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~ 195 (241)
T 2ex4_A 143 -------EPDSYDVIWIQWV------IGHLTD--------------QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILD 195 (241)
T ss_dssp -------CSSCEEEEEEESC------GGGSCH--------------HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEE
T ss_pred -------CCCCEEEEEEcch------hhhCCH--------------HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceec
Confidence 1146999998632 111110 12357899999999999999998754321
Q ss_pred ------cccHHHHHHHHHhCC
Q 006372 157 ------VENEAVVAEILRKCE 171 (648)
Q Consensus 157 ------~ENEaVV~~~L~~~~ 171 (648)
.-+.+-+..+|++.|
T Consensus 196 ~~~~~~~~~~~~~~~~l~~aG 216 (241)
T 2ex4_A 196 DVDSSVCRDLDVVRRIICSAG 216 (241)
T ss_dssp TTTTEEEEBHHHHHHHHHHTT
T ss_pred ccCCcccCCHHHHHHHHHHcC
Confidence 115677788888876
No 143
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.34 E-value=0.0016 Score=64.27 Aligned_cols=96 Identities=15% Similarity=0.079 Sum_probs=67.5
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-+..+++.- ...|+++|.++.-+...++++. ..++.+...|+..+|.
T Consensus 52 GcG~G~~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~-------------- 104 (253)
T 3g5l_A 52 GCGFGWHCIYAAEHG----------AKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAI-------------- 104 (253)
T ss_dssp TCTTCHHHHHHHHTT----------CSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCC--------------
T ss_pred CCCCCHHHHHHHHcC----------CCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCC--------------
Confidence 678898888886641 2389999999988777665543 5678888888766541
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
....||.|++.-. +..-++ ..++|..+.++|||||+|+.++.+
T Consensus 105 -------~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 105 -------EPDAYNVVLSSLA------LHYIAS----------------FDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp -------CTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -------CCCCeEEEEEchh------hhhhhh----------------HHHHHHHHHHHcCCCcEEEEEeCC
Confidence 1257999998431 111111 246789999999999999998653
No 144
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.33 E-value=0.0023 Score=64.72 Aligned_cols=100 Identities=12% Similarity=0.084 Sum_probs=75.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
.|++|..+.++++.. ...|+++|.++.-+...+++++..|. .++.+...|+..+|.
T Consensus 90 GcG~G~~~~~l~~~~----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------------- 146 (297)
T 2o57_A 90 GAGYGGAARFLVRKF----------GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC------------- 146 (297)
T ss_dssp TCTTSHHHHHHHHHH----------CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS-------------
T ss_pred CCCCCHHHHHHHHHh----------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC-------------
Confidence 578999999988764 24899999999999999999988887 478888888766541
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++--. +..-++ ...+|..+.++|||||+|+.++...
T Consensus 147 --------~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 147 --------EDNSYDFIWSQDA------FLHSPD----------------KLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp --------CTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred --------CCCCEeEEEecch------hhhcCC----------------HHHHHHHHHHHcCCCeEEEEEEecc
Confidence 1156999997421 111111 2567899999999999999997653
No 145
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.31 E-value=0.0014 Score=62.34 Aligned_cols=120 Identities=11% Similarity=0.045 Sum_probs=81.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..+++. ...|+++|.++.-+...+++ .+++.+...|+..++.
T Consensus 48 iGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~------------- 98 (203)
T 3h2b_A 48 VGSGTGRWTGHLASL-----------GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDLSD------------- 98 (203)
T ss_dssp ETCTTCHHHHHHHHT-----------TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGGG-------------
T ss_pred ecCCCCHHHHHHHhc-----------CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCccccccc-------------
Confidence 368899988888664 23799999999877766654 3467778787766431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc----
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP---- 156 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p---- 156 (648)
....||.|++.. ++.. +... -...+|.++.++|||||+++.++.....
T Consensus 99 --------~~~~fD~v~~~~------~l~~-------~~~~-------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~ 150 (203)
T 3h2b_A 99 --------SPKRWAGLLAWY------SLIH-------MGPG-------ELPDALVALRMAVEDGGGLLMSFFSGPSLEPM 150 (203)
T ss_dssp --------SCCCEEEEEEES------SSTT-------CCTT-------THHHHHHHHHHTEEEEEEEEEEEECCSSCEEE
T ss_pred --------CCCCeEEEEehh------hHhc-------CCHH-------HHHHHHHHHHHHcCCCcEEEEEEccCCchhhh
Confidence 125799999843 1111 1111 1256789999999999999999866532
Q ss_pred --------cccHHHHHHHHHhCCCceEEEeC
Q 006372 157 --------VENEAVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 157 --------~ENEaVV~~~L~~~~g~veLvd~ 179 (648)
.-...-+..+|++.| |+++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~ 179 (203)
T 3h2b_A 151 YHPVATAYRWPLPELAQALETAG--FQVTSS 179 (203)
T ss_dssp CCSSSCEEECCHHHHHHHHHHTT--EEEEEE
T ss_pred hchhhhhccCCHHHHHHHHHHCC--CcEEEE
Confidence 124666777888775 565554
No 146
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=97.31 E-value=0.0016 Score=65.64 Aligned_cols=100 Identities=13% Similarity=0.033 Sum_probs=73.7
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
.|++|+-+.++++.. ...|+++|.++..+...++++++.+. .++.+...|+..+|
T Consensus 72 GcG~G~~~~~l~~~~----------~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------------- 127 (287)
T 1kpg_A 72 GCGWGATMMRAVEKY----------DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-------------- 127 (287)
T ss_dssp TCTTSHHHHHHHHHH----------CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--------------
T ss_pred CCcccHHHHHHHHHc----------CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--------------
Confidence 578899999988653 13899999999999999999888876 47888877765432
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
..||.|++-- ++..- .+ .-...+|.++.++|||||+|+.++....
T Consensus 128 ----------~~fD~v~~~~------~l~~~-------~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 128 ----------EPVDRIVSIG------AFEHF-------GH-------ERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp ----------CCCSEEEEES------CGGGT-------CT-------TTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred ----------CCeeEEEEeC------chhhc-------Ch-------HHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 3599999742 21111 10 1135678999999999999999887653
No 147
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.30 E-value=0.00091 Score=67.12 Aligned_cols=106 Identities=10% Similarity=0.014 Sum_probs=76.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|.-+..++.. +.+.|+++|.++..+...++++...+. .++.+...|+..+|..
T Consensus 71 iGcG~G~~~~~l~~~----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----------- 129 (298)
T 1ri5_A 71 LGCGKGGDLLKYERA----------GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD----------- 129 (298)
T ss_dssp ETCTTTTTHHHHHHH----------TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC-----------
T ss_pred ECCCCCHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC-----------
Confidence 368889888887654 135899999999999999998888776 4688888887664310
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++.-. + ..-+ .-..-...+|..+.++|||||+|+.+++..
T Consensus 130 ---------~~~~fD~v~~~~~------l------~~~~------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 130 ---------LGKEFDVISSQFS------F------HYAF------STSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp ---------CSSCEEEEEEESC------G------GGGG------SSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred ---------CCCCcCEEEECch------h------hhhc------CCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 1256999998632 1 0000 012234678999999999999999998764
No 148
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.29 E-value=0.00037 Score=74.62 Aligned_cols=136 Identities=15% Similarity=0.110 Sum_probs=87.6
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-----C---cEEEeecccccCCCcccCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-----A---NLIVTNHEAQHFPGCRANKN 73 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-----~---nv~vtn~Da~~~p~~~~~~~ 73 (648)
+++-|+-+.+++.. +...|+++|+|+.-+++.++++..++. + ++.+...||..|..-.
T Consensus 196 GgG~G~~arellk~----------~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~---- 261 (364)
T 2qfm_A 196 GGGDGGILCEIVKL----------KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRY---- 261 (364)
T ss_dssp ECTTCHHHHHHHTT----------CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHH----
T ss_pred ECChhHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhh----
Confidence 35667665555331 236899999999999999988754431 2 6899999988763210
Q ss_pred CCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 74 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
.....+||.|++|+|=...|. . +.. .--..+...++..+.++|+|||.||--+||
T Consensus 262 -------------~~~~~~fDvII~D~~d~P~~~---~--------p~~-L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 262 -------------AKEGREFDYVINDLTAVPIST---S--------PEE-DSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp -------------HHHTCCEEEEEEECCSSCCCC---C-------------CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred -------------hccCCCceEEEECCCCcccCc---C--------chh-hhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 001257999999997211111 1 111 112455667777889999999999999999
Q ss_pred CCccccHHHHHHHHHhCCCceEE
Q 006372 154 MNPVENEAVVAEILRKCEGSVEL 176 (648)
Q Consensus 154 l~p~ENEaVV~~~L~~~~g~veL 176 (648)
.+..|--......|++.-..+..
T Consensus 317 ~~~~e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 317 VNLTEALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp TTCHHHHHHHHHHHTTSSSCEEE
T ss_pred cchHHHHHHHHHHHHHhCCceEE
Confidence 88755555666666665555554
No 149
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.29 E-value=0.00025 Score=70.53 Aligned_cols=103 Identities=17% Similarity=0.070 Sum_probs=69.9
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+++.|.-+.+|++. ....|+++|+++.-+..++++.++.+ .++.+...|+......
T Consensus 68 G~G~G~~~~~~~~~----------~~~~v~~id~~~~~~~~a~~~~~~~~-~~~~~~~~~a~~~~~~------------- 123 (236)
T 3orh_A 68 GFGMAIAASKVQEA----------PIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPT------------- 123 (236)
T ss_dssp CCTTSHHHHHHTTS----------CEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGG-------------
T ss_pred CCCccHHHHHHHHh----------CCcEEEEEeCCHHHHHHHHHHHhhCC-CceEEEeehHHhhccc-------------
Confidence 46778777766542 12579999999998888888776655 4577777777653210
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
.....||.|++|+.-+..... -......++..+.++|||||+++|.+
T Consensus 124 ------~~~~~FD~i~~D~~~~~~~~~-----------------~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 124 ------LPDGHFDGILYDTYPLSEETW-----------------HTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ------SCTTCEEEEEECCCCCBGGGT-----------------TTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ------ccccCCceEEEeeeecccchh-----------------hhcchhhhhhhhhheeCCCCEEEEEe
Confidence 112569999999863322211 11123567889999999999999865
No 150
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=97.29 E-value=0.0025 Score=64.72 Aligned_cols=116 Identities=10% Similarity=0.023 Sum_probs=87.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+|++.|--+..++.. .+.+.|+|+|+++.-+...++|++++|..+ +.+...|+.....
T Consensus 28 IGtGsG~l~i~la~~---------~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~------------ 86 (244)
T 3gnl_A 28 IGSDHAYLPCFAVKN---------QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE------------ 86 (244)
T ss_dssp ETCSTTHHHHHHHHT---------TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC------------
T ss_pred ECCccHHHHHHHHHh---------CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC------------
Confidence 488999988888664 135789999999999999999999999865 8888888654210
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVEN 159 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~EN 159 (648)
....||.|++ .|.|- .+=.+||..+...|+++|++|-|. ...
T Consensus 87 ---------~~~~~D~Ivi----agmGg--------------------~lI~~IL~~~~~~L~~~~~lIlq~-----~~~ 128 (244)
T 3gnl_A 87 ---------KKDAIDTIVI----AGMGG--------------------TLIRTILEEGAAKLAGVTKLILQP-----NIA 128 (244)
T ss_dssp ---------GGGCCCEEEE----EEECH--------------------HHHHHHHHHTGGGGTTCCEEEEEE-----SSC
T ss_pred ---------ccccccEEEE----eCCch--------------------HHHHHHHHHHHHHhCCCCEEEEEc-----CCC
Confidence 0125999886 23331 233568999999999999999875 347
Q ss_pred HHHHHHHHHhCCCceEEE
Q 006372 160 EAVVAEILRKCEGSVELV 177 (648)
Q Consensus 160 EaVV~~~L~~~~g~veLv 177 (648)
...|..+|.+++ |.++
T Consensus 129 ~~~lr~~L~~~G--f~i~ 144 (244)
T 3gnl_A 129 AWQLREWSEQNN--WLIT 144 (244)
T ss_dssp HHHHHHHHHHHT--EEEE
T ss_pred hHHHHHHHHHCC--CEEE
Confidence 888888888765 4443
No 151
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.28 E-value=0.00015 Score=75.32 Aligned_cols=108 Identities=13% Similarity=0.115 Sum_probs=67.1
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEE-eecccccCCCcccCCCCCCCCCcCc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIV-TNHEAQHFPGCRANKNFSSASDKGI 82 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~v-tn~Da~~~p~~~~~~~~~~~~~~~~ 82 (648)
|||+ ..+++++. +.|.|+|+|+++. .+++.+ ...|+..++.
T Consensus 79 GpGs--~~~a~~~~--------~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~--------------- 120 (290)
T 2xyq_A 79 APGT--AVLRQWLP--------TGTLLVDSDLNDF-------------VSDADSTLIGDCATVHT--------------- 120 (290)
T ss_dssp CHHH--HHHHHHSC--------TTCEEEEEESSCC-------------BCSSSEEEESCGGGCCC---------------
T ss_pred CcHH--HHHHHHcC--------CCCEEEEEECCCC-------------CCCCEEEEECccccCCc---------------
Confidence 8999 44445432 2589999999987 135666 7777655321
Q ss_pred ccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccHHH
Q 006372 83 ESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAV 162 (648)
Q Consensus 83 ~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENEaV 162 (648)
...||.|++|.+++..|....+ .... ..+..++|..+.++|||||+++..+-.. ...+ -
T Consensus 121 -------~~~fD~Vvsn~~~~~~g~~~~d----------~~~~-~~l~~~~l~~a~r~LkpGG~~v~~~~~~--~~~~-~ 179 (290)
T 2xyq_A 121 -------ANKWDLIISDMYDPRTKHVTKE----------NDSK-EGFFTYLCGFIKQKLALGGSIAVKITEH--SWNA-D 179 (290)
T ss_dssp -------SSCEEEEEECCCCCC---CCSC----------CCCC-CTHHHHHHHHHHHHEEEEEEEEEEECSS--SCCH-H
T ss_pred -------cCcccEEEEcCCcccccccccc----------ccch-HHHHHHHHHHHHHhcCCCcEEEEEEecc--CCHH-H
Confidence 1469999999877666643211 1111 1234588999999999999999865322 2233 4
Q ss_pred HHHHHHhC
Q 006372 163 VAEILRKC 170 (648)
Q Consensus 163 V~~~L~~~ 170 (648)
+.++|+++
T Consensus 180 l~~~l~~~ 187 (290)
T 2xyq_A 180 LYKLMGHF 187 (290)
T ss_dssp HHHHHTTE
T ss_pred HHHHHHHc
Confidence 55566654
No 152
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.27 E-value=0.00021 Score=74.52 Aligned_cols=78 Identities=17% Similarity=0.175 Sum_probs=61.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|+++|+.|..|++.+ +.+.|+|+|.|+..+...+++++.+| .++.+.+.|+..++... .
T Consensus 33 ~g~G~G~~s~~la~~~---------~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l-~--------- 92 (301)
T 1m6y_A 33 CTVGEGGHSRAILEHC---------PGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLL-K--------- 92 (301)
T ss_dssp TTCTTSHHHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHH-H---------
T ss_pred EeCCcCHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHH-H---------
Confidence 5899999999998874 24799999999999999999998888 78988988876653210 0
Q ss_pred CcccccccccccccEEEEcCCCCC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSG 104 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSG 104 (648)
......||.||+|+|||.
T Consensus 93 ------~~g~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 93 ------TLGIEKVDGILMDLGVST 110 (301)
T ss_dssp ------HTTCSCEEEEEEECSCCH
T ss_pred ------hcCCCCCCEEEEcCccch
Confidence 000146999999999985
No 153
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=97.26 E-value=0.00074 Score=68.07 Aligned_cols=100 Identities=18% Similarity=0.152 Sum_probs=74.9
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|++|.-+..++.. ...|+++|.++.-+...+++++..+. +++.+...|+..++..
T Consensus 76 GcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------------ 132 (285)
T 4htf_A 76 GGGEGQTAIKMAER-----------GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH------------ 132 (285)
T ss_dssp TCTTCHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG------------
T ss_pred CCcchHHHHHHHHC-----------CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh------------
Confidence 67888888887664 25899999999999999999988888 6898998888775421
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++... +-.-++ ...+|..+.++|||||+++.++...
T Consensus 133 --------~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 133 --------LETPVDLILFHAV------LEWVAD----------------PRSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp --------CSSCEEEEEEESC------GGGCSC----------------HHHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred --------cCCCceEEEECch------hhcccC----------------HHHHHHHHHHHcCCCeEEEEEEeCC
Confidence 1257999998532 211111 1458999999999999999987654
No 154
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.26 E-value=0.00039 Score=66.13 Aligned_cols=113 Identities=15% Similarity=0.055 Sum_probs=75.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-+..++..- ...|+++|.++..+..+++++.. .+++.+...|+..++.
T Consensus 50 GcG~G~~~~~l~~~~----------~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~-------------- 103 (215)
T 2pxx_A 50 GCGNSALSYELFLGG----------FPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDF-------------- 103 (215)
T ss_dssp TCTTCSHHHHHHHTT----------CCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCS--------------
T ss_pred CCCCcHHHHHHHHcC----------CCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCC--------------
Confidence 678888888876641 12799999999999988877653 3567777777765431
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++..+....- ..++. .|... ..-.....++|..+.++|||||+++.++.+.
T Consensus 104 -------~~~~fD~v~~~~~~~~~~--~~~~~---~~~~~--~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 104 -------PSASFDVVLEKGTLDALL--AGERD---PWTVS--SEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp -------CSSCEEEEEEESHHHHHT--TTCSC---TTSCC--HHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred -------CCCcccEEEECcchhhhc--ccccc---ccccc--cchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 114699999865531110 01111 23221 1123345788999999999999999998765
No 155
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.25 E-value=0.0011 Score=63.89 Aligned_cols=103 Identities=15% Similarity=0.230 Sum_probs=69.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHH----HhCCCcEEEeecccccCCCcccCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTK----RMCTANLIVTNHEAQHFPGCRANKNFSS 76 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lk----Rlg~~nv~vtn~Da~~~p~~~~~~~~~~ 76 (648)
++|++|..+..+++.. |.+.|+++|.++..+..+..+.+ +.+.+++.+...|+..+|..
T Consensus 34 iGcG~G~~~~~la~~~---------p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~-------- 96 (218)
T 3mq2_A 34 VGTGDGKHPYKVARQN---------PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPL-------- 96 (218)
T ss_dssp ESCTTCHHHHHHHHHC---------TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSC--------
T ss_pred ecCCCCHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCC--------
Confidence 4789999999998852 46899999999998876554443 35667899999988775421
Q ss_pred CCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 77 ASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 77 ~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
... |.|.+..+ |... ......-+..+|..+.++|||||+++.+.
T Consensus 97 -------------~~~-d~v~~~~~-------------~~~~----~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 97 -------------SGV-GELHVLMP-------------WGSL----LRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp -------------CCE-EEEEEESC-------------CHHH----HHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred -------------CCC-CEEEEEcc-------------chhh----hhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 022 66665443 1100 00001112567899999999999999854
No 156
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.25 E-value=0.00083 Score=67.73 Aligned_cols=96 Identities=15% Similarity=0.045 Sum_probs=72.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|+.|.-+..++.. ...|+++|.++.-+..++.++.+.+. ++.+...|+..++.
T Consensus 127 ~GcG~G~~~~~l~~~-----------g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~------------- 181 (286)
T 3m70_A 127 LGCGQGRNSLYLSLL-----------GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI------------- 181 (286)
T ss_dssp ESCTTCHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC-------------
T ss_pred ECCCCCHHHHHHHHC-----------CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc-------------
Confidence 478899988888764 24899999999999999999999887 88888888766431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEe
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYS 150 (648)
...||.|++..+.. .+++ .....+|.++.++|||||+++..
T Consensus 182 ---------~~~fD~i~~~~~~~-------------~~~~-------~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 182 ---------QENYDFIVSTVVFM-------------FLNR-------ERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp ---------CSCEEEEEECSSGG-------------GSCG-------GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred ---------cCCccEEEEccchh-------------hCCH-------HHHHHHHHHHHHhcCCCcEEEEE
Confidence 25699999976421 0111 12356899999999999997664
No 157
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.23 E-value=0.00054 Score=69.80 Aligned_cols=103 Identities=15% Similarity=0.142 Sum_probs=75.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC---CcEEEeecccccCCCcccCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT---ANLIVTNHEAQHFPGCRANKNFSSA 77 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~---~nv~vtn~Da~~~p~~~~~~~~~~~ 77 (648)
++|++|.-+..|+.. ...|+++|+++.-+...++++...+. .++.+...|+..++.
T Consensus 89 lGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---------- 147 (299)
T 3g2m_A 89 LAAGMGRLTFPFLDL-----------GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL---------- 147 (299)
T ss_dssp ETCTTTTTHHHHHTT-----------TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC----------
T ss_pred EeccCCHHHHHHHHc-----------CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc----------
Confidence 367888888877653 24799999999999999988887764 578888888776542
Q ss_pred CCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 78 SDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 78 ~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
...||.|+|-.. ++.-+. ...+..+|.++.++|||||+|+.++....
T Consensus 148 ------------~~~fD~v~~~~~------------~~~~~~-------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 148 ------------DKRFGTVVISSG------------SINELD-------EADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp ------------SCCEEEEEECHH------------HHTTSC-------HHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred ------------CCCcCEEEECCc------------ccccCC-------HHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 156999997211 111111 12346789999999999999999988764
No 158
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.23 E-value=0.00035 Score=72.68 Aligned_cols=106 Identities=13% Similarity=0.071 Sum_probs=72.8
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh----CCCcEEEeecccccCCCcccCCCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGCRANKNFSSA 77 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl----g~~nv~vtn~Da~~~p~~~~~~~~~~~ 77 (648)
+++.|+-+..++.. .+.+.|+++|+|+.-++..++++..+ ..+++.+...|+..+...
T Consensus 103 G~G~G~~~~~l~~~---------~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~--------- 164 (304)
T 2o07_A 103 GGGDGGVLREVVKH---------PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ--------- 164 (304)
T ss_dssp ECTTSHHHHHHTTC---------TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT---------
T ss_pred CCCchHHHHHHHHc---------CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh---------
Confidence 56778877766542 13478999999999999999888763 346789998888664210
Q ss_pred CCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 78 SDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 78 ~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++|++.. .+ +. .+-.+.+++..+.++|+|||+||..+.+.
T Consensus 165 -----------~~~~fD~Ii~d~~~~-~~-------------~~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 212 (304)
T 2o07_A 165 -----------NQDAFDVIITDSSDP-MG-------------PA----ESLFKESYYQLMKTALKEDGVLCCQGECQ 212 (304)
T ss_dssp -----------CSSCEEEEEEECC-----------------------------CHHHHHHHHHEEEEEEEEEEEECT
T ss_pred -----------CCCCceEEEECCCCC-CC-------------cc----hhhhHHHHHHHHHhccCCCeEEEEecCCc
Confidence 025699999998731 01 10 01234577899999999999999887553
No 159
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.22 E-value=0.0013 Score=64.53 Aligned_cols=117 Identities=10% Similarity=-0.044 Sum_probs=79.2
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|..+..+++.. ...|+++|.++.-+..+++++... .++.+...|+..++.
T Consensus 101 G~G~G~~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~-------------- 154 (254)
T 1xtp_A 101 GAGIGRITKNLLTKL----------YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATL-------------- 154 (254)
T ss_dssp TCTTTHHHHHTHHHH----------CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCC--------------
T ss_pred CCCcCHHHHHHHHhh----------cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCC--------------
Confidence 688999988887764 247999999999888887766544 577888887765431
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc-----
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP----- 156 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p----- 156 (648)
....||.|++-- ++. .+.. .-...+|.++.++|||||+|+.++.....
T Consensus 155 -------~~~~fD~v~~~~------~l~-------~~~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~ 207 (254)
T 1xtp_A 155 -------PPNTYDLIVIQW------TAI-------YLTD-------ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLV 207 (254)
T ss_dssp -------CSSCEEEEEEES------CGG-------GSCH-------HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEE
T ss_pred -------CCCCeEEEEEcc------hhh-------hCCH-------HHHHHHHHHHHHhcCCCeEEEEEecCCCccccee
Confidence 114699999732 111 1111 12467899999999999999999853211
Q ss_pred -------cccHHHHHHHHHhCC
Q 006372 157 -------VENEAVVAEILRKCE 171 (648)
Q Consensus 157 -------~ENEaVV~~~L~~~~ 171 (648)
.-..+-+..+|++.|
T Consensus 208 ~~~~~~~~~~~~~~~~~l~~aG 229 (254)
T 1xtp_A 208 DKEDSSLTRSDIHYKRLFNESG 229 (254)
T ss_dssp ETTTTEEEBCHHHHHHHHHHHT
T ss_pred cccCCcccCCHHHHHHHHHHCC
Confidence 123456667777665
No 160
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.22 E-value=0.00029 Score=72.31 Aligned_cols=106 Identities=15% Similarity=0.085 Sum_probs=74.8
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhC----CCcEEEeecccccCCCcccCCCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC----TANLIVTNHEAQHFPGCRANKNFSSA 77 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg----~~nv~vtn~Da~~~p~~~~~~~~~~~ 77 (648)
+++.|+-+..++.. .+...|+++|+|+.-++..++++..++ .+++.+...|+..+...
T Consensus 86 G~G~G~~~~~l~~~---------~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~--------- 147 (283)
T 2i7c_A 86 GGGDGGIIRELCKY---------KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN--------- 147 (283)
T ss_dssp ECTTSHHHHHHTTC---------TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH---------
T ss_pred eCCcCHHHHHHHHc---------CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHh---------
Confidence 56778877766542 134689999999999999988876653 46888888888664210
Q ss_pred CCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 78 SDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 78 ~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++|++.. .|. . ..| .+.+++..+.++|+|||++|..++|.
T Consensus 148 -----------~~~~fD~Ii~d~~~~-~~~-------------~--~~l--~~~~~l~~~~~~L~pgG~lv~~~~~~ 195 (283)
T 2i7c_A 148 -----------VTNTYDVIIVDSSDP-IGP-------------A--ETL--FNQNFYEKIYNALKPNGYCVAQCESL 195 (283)
T ss_dssp -----------CCSCEEEEEEECCCT-TTG-------------G--GGG--SSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred -----------CCCCceEEEEcCCCC-CCc-------------c--hhh--hHHHHHHHHHHhcCCCcEEEEECCCc
Confidence 025799999998632 111 0 001 23577889999999999999988763
No 161
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.20 E-value=0.0033 Score=66.90 Aligned_cols=109 Identities=11% Similarity=0.162 Sum_probs=77.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh-----C---CCcEEEeecccccCCCcccCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-----C---TANLIVTNHEAQHFPGCRANK 72 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl-----g---~~nv~vtn~Da~~~p~~~~~~ 72 (648)
++|++|.-+..|+.... +.+.|+++|+++.-+...+++++++ | .+++.+...|+..+.....
T Consensus 90 lGcG~G~~~~~la~~~~--------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~-- 159 (383)
T 4fsd_A 90 LGCGTGRDVYLASKLVG--------EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP-- 159 (383)
T ss_dssp ESCTTSHHHHHHHHHHT--------TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS--
T ss_pred ecCccCHHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc--
Confidence 36899999999988763 2579999999999999999888765 4 2688888888766421100
Q ss_pred CCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 73 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
.......||.|++... +..-++ ...+|.++.++|||||+|+.++-
T Consensus 160 -------------~~~~~~~fD~V~~~~~------l~~~~d----------------~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 160 -------------EGVPDSSVDIVISNCV------CNLSTN----------------KLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp -------------CCCCTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------------CCCCCCCEEEEEEccc------hhcCCC----------------HHHHHHHHHHHcCCCCEEEEEEe
Confidence 0011257999998632 211111 14789999999999999999875
Q ss_pred cC
Q 006372 153 SM 154 (648)
Q Consensus 153 Sl 154 (648)
..
T Consensus 205 ~~ 206 (383)
T 4fsd_A 205 YA 206 (383)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 162
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.19 E-value=0.0011 Score=65.87 Aligned_cols=98 Identities=15% Similarity=0.183 Sum_probs=72.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-|..+++. .+.|+++|.++..+...++++++.+.+++.+...|+..+|.
T Consensus 45 GcG~G~~~~~l~~~-----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~-------------- 99 (260)
T 1vl5_A 45 ATGGGHVANAFAPF-----------VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF-------------- 99 (260)
T ss_dssp TCTTCHHHHHHGGG-----------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS--------------
T ss_pred eCCCCHHHHHHHHh-----------CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCC--------------
Confidence 57788887777553 24899999999999999999999888889888888776541
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
....||.|++-.. + ..| +. ...+|.++.++|||||+|+.++..
T Consensus 100 -------~~~~fD~V~~~~~------l-------~~~-~d--------~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 100 -------TDERFHIVTCRIA------A-------HHF-PN--------PASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp -------CTTCEEEEEEESC------G-------GGC-SC--------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -------CCCCEEEEEEhhh------h-------Hhc-CC--------HHHHHHHHHHHcCCCCEEEEEEcC
Confidence 1156999997522 1 111 11 136789999999999999987543
No 163
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.18 E-value=0.00098 Score=67.67 Aligned_cols=103 Identities=17% Similarity=0.124 Sum_probs=74.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|.-|..|++.+.. +...|+++|.++.-++..+++++..+.. ++.+.+.|+..+|.
T Consensus 77 lGcGtG~~~~~la~~~~~-------~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~------------ 137 (261)
T 4gek_A 77 LGCSLGAATLSVRRNIHH-------DNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI------------ 137 (261)
T ss_dssp ETCTTTHHHHHHHHTCCS-------SSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC------------
T ss_pred EeCCCCHHHHHHHHhcCC-------CCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc------------
Confidence 368899999888876532 2458999999999999999988888764 78888888776541
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHH-HHHHHHHHhhccccCcEEEEecccC
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSL-QVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~l-Q~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
..||.|++-- ++. | +... ...+|.+..+.|||||++|.+.-..
T Consensus 138 -----------~~~d~v~~~~------~l~--------~-------~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 138 -----------ENASMVVLNF------TLQ--------F-------LEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp -----------CSEEEEEEES------CGG--------G-------SCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred -----------cccccceeee------eee--------e-------cCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 3589888621 211 0 1111 2467999999999999999876443
No 164
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.17 E-value=0.00019 Score=75.20 Aligned_cols=106 Identities=15% Similarity=0.054 Sum_probs=74.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh----CCCcEEEeecccccCCCcccCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGCRANKNFSS 76 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl----g~~nv~vtn~Da~~~p~~~~~~~~~~ 76 (648)
++++.|+-+..++.. .+...|+++|+|+.-++..++++.++ ..+++.+...|+..+...
T Consensus 123 iG~G~G~~~~~l~~~---------~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~-------- 185 (321)
T 2pt6_A 123 VGGGDGGIIRELCKY---------KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN-------- 185 (321)
T ss_dssp EECTTCHHHHHHTTC---------TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH--------
T ss_pred EcCCccHHHHHHHHc---------CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhh--------
Confidence 367888888777542 13468999999999999999887663 246788888887654210
Q ss_pred CCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 77 ASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 77 ~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
....||.|++|++.. .| +.. .+ .+.+++..+.++|+|||++|..+.+
T Consensus 186 ------------~~~~fDvIi~d~~~p-~~-------------~~~--~l--~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 186 ------------VTNTYDVIIVDSSDP-IG-------------PAE--TL--FNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp ------------CCSCEEEEEEECCCS-SS-------------GGG--GG--SSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ------------cCCCceEEEECCcCC-CC-------------cch--hh--hHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 025699999998521 11 100 01 1367889999999999999997655
No 165
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.13 E-value=0.0025 Score=71.69 Aligned_cols=151 Identities=14% Similarity=0.098 Sum_probs=95.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC--CcEEEeecccccC--CCcccCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT--ANLIVTNHEAQHF--PGCRANKNFSS 76 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~--~nv~vtn~Da~~~--p~~~~~~~~~~ 76 (648)
.||+.|+....++..+... ....++++|+++.-+.+.+.|+...|. .++.+.+.|+... |.
T Consensus 228 PaCGSG~fLi~a~~~l~~~------~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~--------- 292 (542)
T 3lkd_A 228 ATMGSGSLLLNAKRYSRQP------QTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPT--------- 292 (542)
T ss_dssp TTCTTSTTGGGHHHHCSCT------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCC---------
T ss_pred cccchhHHHHHHHHHHHhc------cCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccc---------
Confidence 3899999999888876421 246899999999999999999888887 5778888886543 21
Q ss_pred CCCcCcccccccccccccEEEEcCCCCCCCccccCcccc--cccCcch-hhhhHHHHHHHHHHHhhccc-cCcEEEEecc
Q 006372 77 ASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIW--RKWNVGL-GNGLHSLQVQIAMRGISLLK-VGGRIVYSTC 152 (648)
Q Consensus 77 ~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~--~kws~~~-~~~L~~lQ~~IL~~Al~lLk-~GG~LVYSTC 152 (648)
....+||.|+..||=++... ...... .+|..-. ...-...+...+.+++++|+ +||++++-+=
T Consensus 293 -----------~~~~~fD~IvaNPPf~~~~~--~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 293 -----------QEPTNFDGVLMNPPYSAKWS--ASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp -----------SSCCCBSEEEECCCTTCCCC--CCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred -----------cccccccEEEecCCcCCccc--cchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 11257999999999985432 111110 0121100 11112234568999999999 9999866543
Q ss_pred c--CCccccHHHHHHHHHhCCCceEEEeC
Q 006372 153 S--MNPVENEAVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 153 S--l~p~ENEaVV~~~L~~~~g~veLvd~ 179 (648)
. ++-.-.+.-+...|-+...-..++.+
T Consensus 360 ~g~Lf~~~~~~~iRk~Lle~~~l~~II~L 388 (542)
T 3lkd_A 360 HGVLFRGNAEGTIRKALLEEGAIDTVIGL 388 (542)
T ss_dssp THHHHCCTHHHHHHHHHHHTTCEEEEEEC
T ss_pred chHhhCCchhHHHHHHHHhCCceeEEEEc
Confidence 2 32222256666666554322234443
No 166
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.13 E-value=0.0022 Score=62.35 Aligned_cols=98 Identities=11% Similarity=0.067 Sum_probs=68.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+.++++. ...|+++|.++.-+...+++ ....++.+...|+..+|.
T Consensus 60 iG~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~---~~~~~~~~~~~d~~~~~~------------- 112 (242)
T 3l8d_A 60 VGCGDGYGTYKLSRT-----------GYKAVGVDISEVMIQKGKER---GEGPDLSFIKGDLSSLPF------------- 112 (242)
T ss_dssp ETCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHTT---TCBTTEEEEECBTTBCSS-------------
T ss_pred EcCCCCHHHHHHHHc-----------CCeEEEEECCHHHHHHHHhh---cccCCceEEEcchhcCCC-------------
Confidence 368899988888764 24899999999877766554 344678888888766541
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
....||.|++-.. +..-++ ...+|..+.++|+|||+++.++....
T Consensus 113 --------~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 113 --------ENEQFEAIMAINS------LEWTEE----------------PLRALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp --------CTTCEEEEEEESC------TTSSSC----------------HHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred --------CCCCccEEEEcCh------HhhccC----------------HHHHHHHHHHHhCCCeEEEEEEcCCc
Confidence 1257999997322 211111 13678999999999999999985543
No 167
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.12 E-value=0.00082 Score=68.72 Aligned_cols=105 Identities=13% Similarity=0.048 Sum_probs=73.2
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh----CCCcEEEeecccccCCCcccCCCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGCRANKNFSSA 77 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl----g~~nv~vtn~Da~~~p~~~~~~~~~~~ 77 (648)
+++.|+-+..++.. .+...|+++|+|+.-++..++++..+ ..+++.+...|+..+...
T Consensus 83 G~G~G~~~~~l~~~---------~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~--------- 144 (275)
T 1iy9_A 83 GGGDGGVIREILKH---------PSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK--------- 144 (275)
T ss_dssp SCTTCHHHHHHTTC---------TTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT---------
T ss_pred CCchHHHHHHHHhC---------CCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh---------
Confidence 56777777666432 12468999999999999999888654 346899999998764210
Q ss_pred CCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 78 SDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 78 ~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
....||.|++|+|.. .+. ...+ ...+++..+.+.|+|||++|..+.+
T Consensus 145 -----------~~~~fD~Ii~d~~~~-~~~---~~~l--------------~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 145 -----------SENQYDVIMVDSTEP-VGP---AVNL--------------FTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp -----------CCSCEEEEEESCSSC-CSC---CCCC--------------STTHHHHHHHHHEEEEEEEEEECCC
T ss_pred -----------CCCCeeEEEECCCCC-CCc---chhh--------------hHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 025699999998841 121 0001 1245688889999999999998765
No 168
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.09 E-value=0.003 Score=60.44 Aligned_cols=112 Identities=14% Similarity=-0.014 Sum_probs=76.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|..+.+++.. ...|+++|.++.-+...+.++ ++.+...|+..++
T Consensus 50 iGcG~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~-------------- 98 (211)
T 3e23_A 50 LGCGAGYQAEAMLAA-----------GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLD-------------- 98 (211)
T ss_dssp SSCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCC--------------
T ss_pred ECCCCCHHHHHHHHc-----------CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCC--------------
Confidence 468899988888764 258999999998888777665 2334455555443
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcc---
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV--- 157 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~--- 157 (648)
....||.|++... +- .+. ..-...+|..+.++|||||+++.++......
T Consensus 99 --------~~~~fD~v~~~~~------l~-------~~~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 150 (211)
T 3e23_A 99 --------AIDAYDAVWAHAC------LL-------HVP-------RDELADVLKLIWRALKPGGLFYASYKSGEGEGRD 150 (211)
T ss_dssp --------CCSCEEEEEECSC------GG-------GSC-------HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEEC
T ss_pred --------CCCcEEEEEecCc------hh-------hcC-------HHHHHHHHHHHHHhcCCCcEEEEEEcCCCccccc
Confidence 1257999998432 11 111 1234678999999999999999998765432
Q ss_pred --------ccHHHHHHHHHhCC
Q 006372 158 --------ENEAVVAEILRKCE 171 (648)
Q Consensus 158 --------ENEaVV~~~L~~~~ 171 (648)
-+.+-+..+|++.|
T Consensus 151 ~~~~~~~~~~~~~~~~~l~~aG 172 (211)
T 3e23_A 151 KLARYYNYPSEEWLRARYAEAG 172 (211)
T ss_dssp TTSCEECCCCHHHHHHHHHHHC
T ss_pred ccchhccCCCHHHHHHHHHhCC
Confidence 25677777887765
No 169
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.08 E-value=0.0013 Score=65.07 Aligned_cols=121 Identities=16% Similarity=0.057 Sum_probs=75.2
Q ss_pred chHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC---CcEEEeecccccC-----CCcccCCCCCC
Q 006372 5 PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT---ANLIVTNHEAQHF-----PGCRANKNFSS 76 (648)
Q Consensus 5 PGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~---~nv~vtn~Da~~~-----p~~~~~~~~~~ 76 (648)
.|.-|..+|++ +.|.|+++|.|+.+++..++++++.|. .++.+...|+... |.-..... .
T Consensus 39 tGySTl~lA~~----------~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~-~- 106 (202)
T 3cvo_A 39 SGGSTVVAAEL----------PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR-S- 106 (202)
T ss_dssp CSHHHHHHHTS----------TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG-G-
T ss_pred chHHHHHHHHc----------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh-h-
Confidence 46655555542 148999999999999999999999994 5788888886432 11000000 0
Q ss_pred CCCcCcccc--cccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 77 ASDKGIESE--SNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 77 ~~~~~~~~~--~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
-..+... .......||.||+|+. |. + .-+..++.+|++||+||.=-.+.
T Consensus 107 --l~~~~~~i~~~~~~~~fDlIfIDg~--------k~------------------~-~~~~~~l~~l~~GG~Iv~DNv~~ 157 (202)
T 3cvo_A 107 --YPDYPLAVWRTEGFRHPDVVLVDGR--------FR------------------V-GCALATAFSITRPVTLLFDDYSQ 157 (202)
T ss_dssp --TTHHHHGGGGCTTCCCCSEEEECSS--------SH------------------H-HHHHHHHHHCSSCEEEEETTGGG
T ss_pred --HHHHhhhhhccccCCCCCEEEEeCC--------Cc------------------h-hHHHHHHHhcCCCeEEEEeCCcC
Confidence 0000000 0001256999999984 10 0 23455889999999998876554
Q ss_pred CccccHHHHHHHHH
Q 006372 155 NPVENEAVVAEILR 168 (648)
Q Consensus 155 ~p~ENEaVV~~~L~ 168 (648)
.+ ....|..+|+
T Consensus 158 r~--~y~~v~~~~~ 169 (202)
T 3cvo_A 158 RR--WQHQVEEFLG 169 (202)
T ss_dssp CS--SGGGGHHHHC
T ss_pred Cc--chHHHHHHHh
Confidence 43 4456677775
No 170
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.05 E-value=0.0027 Score=59.02 Aligned_cols=118 Identities=13% Similarity=-0.041 Sum_probs=78.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|+.|..+..++.. ...|+++|.++..+..+++++ +++.+...|+..++.
T Consensus 54 G~G~G~~~~~l~~~-----------~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~-------------- 103 (195)
T 3cgg_A 54 GCGQGRIGGYLSKQ-----------GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQI-------------- 103 (195)
T ss_dssp TCTTTHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCC--------------
T ss_pred CCCCCHHHHHHHHC-----------CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCC--------------
Confidence 67889888887664 247999999999888777654 346667777655321
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccHH
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEA 161 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENEa 161 (648)
....||.|++.+++- .... ......+|..+.++|+|||+++.++.+... -...
T Consensus 104 -------~~~~~D~i~~~~~~~------------~~~~-------~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~-~~~~ 156 (195)
T 3cgg_A 104 -------SETDFDLIVSAGNVM------------GFLA-------EDGREPALANIHRALGADGRAVIGFGAGRG-WVFG 156 (195)
T ss_dssp -------CCCCEEEEEECCCCG------------GGSC-------HHHHHHHHHHHHHHEEEEEEEEEEEETTSS-CCHH
T ss_pred -------CCCceeEEEECCcHH------------hhcC-------hHHHHHHHHHHHHHhCCCCEEEEEeCCCCC-cCHH
Confidence 115699999964421 1111 122467899999999999999998765433 2345
Q ss_pred HHHHHHHhCCCceEEEe
Q 006372 162 VVAEILRKCEGSVELVD 178 (648)
Q Consensus 162 VV~~~L~~~~g~veLvd 178 (648)
-+..+|++.+ ++++.
T Consensus 157 ~~~~~l~~~G--f~~~~ 171 (195)
T 3cgg_A 157 DFLEVAERVG--LELEN 171 (195)
T ss_dssp HHHHHHHHHT--EEEEE
T ss_pred HHHHHHHHcC--CEEee
Confidence 5666666654 44443
No 171
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.05 E-value=0.0024 Score=61.36 Aligned_cols=101 Identities=15% Similarity=0.166 Sum_probs=69.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..+++. ...|+++|.++.-+...++++. .++.+...|+..++.
T Consensus 52 iGcG~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~------------- 103 (220)
T 3hnr_A 52 FGVGTGNLTNKLLLA-----------GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEV------------- 103 (220)
T ss_dssp ECCTTSHHHHHHHHT-----------TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCC-------------
T ss_pred eCCCCCHHHHHHHhC-----------CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCC-------------
Confidence 368889888887664 2589999999988777765543 567777777765431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE 158 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E 158 (648)
. ..||.|++... +..-++ ..+..+|..+.++|||||+++.++......+
T Consensus 104 --------~-~~fD~v~~~~~------l~~~~~--------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 152 (220)
T 3hnr_A 104 --------P-TSIDTIVSTYA------FHHLTD--------------DEKNVAIAKYSQLLNKGGKIVFADTIFADQD 152 (220)
T ss_dssp --------C-SCCSEEEEESC------GGGSCH--------------HHHHHHHHHHHHHSCTTCEEEEEEECBSSHH
T ss_pred --------C-CCeEEEEECcc------hhcCCh--------------HHHHHHHHHHHHhcCCCCEEEEEeccccChH
Confidence 1 56999998632 111111 1125689999999999999999986654433
No 172
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.05 E-value=0.002 Score=67.88 Aligned_cols=114 Identities=11% Similarity=0.045 Sum_probs=80.1
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|+.|.-+..++.. +.+.|+|+|.+. -+...++++++.|. .++.+...|...++.
T Consensus 58 GcGtG~ls~~la~~----------g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~------------- 113 (348)
T 2y1w_A 58 GCGSGILSFFAAQA----------GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL------------- 113 (348)
T ss_dssp TCTTSHHHHHHHHT----------TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC-------------
T ss_pred CCCccHHHHHHHhC----------CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC-------------
Confidence 68889888777653 245899999996 67888888888887 578888888765421
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC--ccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN--PVE 158 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~--p~E 158 (648)
..+||.|++..+....+ ++ .....+..+.++|||||+++-+++++. |.+
T Consensus 114 ---------~~~~D~Ivs~~~~~~~~----~~----------------~~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~ 164 (348)
T 2y1w_A 114 ---------PEQVDIIISEPMGYMLF----NE----------------RMLESYLHAKKYLKPSGNMFPTIGDVHLAPFT 164 (348)
T ss_dssp ---------SSCEEEEEECCCBTTBT----TT----------------SHHHHHHHGGGGEEEEEEEESCEEEEEEEEEC
T ss_pred ---------CCceeEEEEeCchhcCC----hH----------------HHHHHHHHHHhhcCCCeEEEEecCcEEEEEec
Confidence 14699999976522111 11 113456778899999999998888864 667
Q ss_pred cHHHHHHHHH
Q 006372 159 NEAVVAEILR 168 (648)
Q Consensus 159 NEaVV~~~L~ 168 (648)
.+..-.+.+.
T Consensus 165 ~~~~~~~~~~ 174 (348)
T 2y1w_A 165 DEQLYMEQFT 174 (348)
T ss_dssp CHHHHHHHHH
T ss_pred chHHhhhhcc
Confidence 7665554443
No 173
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=97.02 E-value=0.0035 Score=64.20 Aligned_cols=101 Identities=13% Similarity=0.049 Sum_probs=75.4
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|++|.-+.++++.. ...|+++|+++..+...+++++..|.. ++.+...|+..+|
T Consensus 98 GcG~G~~~~~la~~~----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------------- 153 (318)
T 2fk8_A 98 GCGWGTTMRRAVERF----------DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-------------- 153 (318)
T ss_dssp SCTTSHHHHHHHHHH----------CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--------------
T ss_pred cccchHHHHHHHHHC----------CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--------------
Confidence 578899999888764 148999999999999999999888874 5788777765432
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p 156 (648)
..||.|++.-. +..-+ . .-...+|..+.++|||||+++.++.....
T Consensus 154 ----------~~fD~v~~~~~------l~~~~-------~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 154 ----------EPVDRIVSIEA------FEHFG-------H-------ENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp ----------CCCSEEEEESC------GGGTC-------G-------GGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred ----------CCcCEEEEeCh------HHhcC-------H-------HHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 45999997532 11111 0 12356789999999999999999887644
No 174
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.00 E-value=0.0024 Score=62.82 Aligned_cols=98 Identities=15% Similarity=0.095 Sum_probs=70.8
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|..+..++.. ...|+++|.++..+...++++...+. ++.+...|+..++.
T Consensus 48 lGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~------------- 102 (252)
T 1wzn_A 48 LACGTGIPTLELAER-----------GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAF------------- 102 (252)
T ss_dssp ETCTTCHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCC-------------
T ss_pred eCCCCCHHHHHHHHC-----------CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhccc-------------
Confidence 368899998888663 24799999999999999999888775 57777777765431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
...||.|++... .... +. .....++|..+.++|||||++|..+
T Consensus 103 ---------~~~fD~v~~~~~--~~~~----------~~-------~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 103 ---------KNEFDAVTMFFS--TIMY----------FD-------EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp ---------CSCEEEEEECSS--GGGG----------SC-------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------CCCccEEEEcCC--chhc----------CC-------HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 146999997321 1110 11 1235678999999999999999765
No 175
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.00 E-value=0.0022 Score=61.02 Aligned_cols=101 Identities=8% Similarity=-0.035 Sum_probs=70.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|+.|.-+..++.. ....|+++|.++..+...++++++.+ .++.+...|+..++.
T Consensus 31 GcG~G~~~~~~~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~-------------- 85 (209)
T 2p8j_A 31 GAGGDLPPLSIFVE----------DGYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLPF-------------- 85 (209)
T ss_dssp SCCSSSCTHHHHHH----------TTCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCCS--------------
T ss_pred CCCCCHHHHHHHHh----------CCCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCCC--------------
Confidence 45677665544432 13589999999999999999888776 456667777665431
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++... +. .+. ..-...+|.++.++|||||+++.++.+.
T Consensus 86 -------~~~~fD~v~~~~~------l~-------~~~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 86 -------KDESMSFVYSYGT------IF-------HMR-------KNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp -------CTTCEEEEEECSC------GG-------GSC-------HHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred -------CCCceeEEEEcCh------HH-------hCC-------HHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 1156999997422 11 111 1234678899999999999999999886
No 176
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=96.99 E-value=0.0018 Score=68.04 Aligned_cols=130 Identities=14% Similarity=0.112 Sum_probs=83.5
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
.++.|+-+..|+... |...|+++|+|+.-++..++++.....+++.+...|+..|..-
T Consensus 97 G~G~G~la~~la~~~---------p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~------------- 154 (317)
T 3gjy_A 97 GGGACTMARYFADVY---------PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAES------------- 154 (317)
T ss_dssp SCGGGHHHHHHHHHS---------TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHT-------------
T ss_pred ECCcCHHHHHHHHHC---------CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhh-------------
Confidence 467787777776642 3458999999999888887766444456899999998775210
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc-cH
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE-NE 160 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E-NE 160 (648)
.....||.|++|++.. .+. |. . | ...+++..+.++|+|||++|..+.+-.+.+ -.
T Consensus 155 ------~~~~~fDvIi~D~~~~-~~~----~~--------~---L--~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~ 210 (317)
T 3gjy_A 155 ------FTPASRDVIIRDVFAG-AIT----PQ--------N---F--TTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAK 210 (317)
T ss_dssp ------CCTTCEEEEEECCSTT-SCC----CG--------G---G--SBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHH
T ss_pred ------ccCCCCCEEEECCCCc-ccc----ch--------h---h--hHHHHHHHHHHhcCCCcEEEEEecCCcchHHHH
Confidence 0125799999997632 121 11 0 0 124678889999999999998887643322 22
Q ss_pred HHHHHHHHhCCCceEEEe
Q 006372 161 AVVAEILRKCEGSVELVD 178 (648)
Q Consensus 161 aVV~~~L~~~~g~veLvd 178 (648)
.+++.+-+.++ .+.++.
T Consensus 211 ~~~~tL~~vF~-~v~~~~ 227 (317)
T 3gjy_A 211 SELAGMMEVFE-HVAVIA 227 (317)
T ss_dssp HHHHHHHHHCS-EEEEEE
T ss_pred HHHHHHHHHCC-ceEEEE
Confidence 34444433443 455443
No 177
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=96.99 E-value=0.0031 Score=62.00 Aligned_cols=96 Identities=13% Similarity=0.130 Sum_probs=69.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..++... |.+.|+++|.++..+...+++ .+++.+...|+..++ .
T Consensus 40 iG~G~G~~~~~l~~~~---------~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~-~------------ 92 (259)
T 2p35_A 40 LGCGPGNSTELLTDRY---------GVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK-P------------ 92 (259)
T ss_dssp ETCTTTHHHHHHHHHH---------CTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC-C------------
T ss_pred ecCcCCHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC-c------------
Confidence 3688999999998875 235799999999988877665 356777777776543 1
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
...||.|++... + .|-+ -...+|.++.++|||||+|+.++..-
T Consensus 93 ---------~~~fD~v~~~~~------l--------~~~~--------~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 93 ---------AQKADLLYANAV------F--------QWVP--------DHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp ---------SSCEEEEEEESC------G--------GGST--------THHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred ---------cCCcCEEEEeCc------h--------hhCC--------CHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 156999998432 1 1111 12467899999999999999998543
No 178
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=96.95 E-value=0.0008 Score=71.05 Aligned_cols=107 Identities=10% Similarity=0.047 Sum_probs=75.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh--C--CCcEEEeecccccCCCcccCCCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM--C--TANLIVTNHEAQHFPGCRANKNFSSA 77 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl--g--~~nv~vtn~Da~~~p~~~~~~~~~~~ 77 (648)
+++.|+-+..|+.. .+...|+++|+|+.-+...++++.++ + .+++.+...|+..+...
T Consensus 128 G~G~G~~a~~la~~---------~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~--------- 189 (334)
T 1xj5_A 128 GGGDGGVLREVARH---------ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN--------- 189 (334)
T ss_dssp TCSSSHHHHHHTTC---------TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT---------
T ss_pred CCCccHHHHHHHHc---------CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHh---------
Confidence 57788877776542 13468999999999999999988775 3 36789998888654210
Q ss_pred CCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 78 SDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 78 ~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
.....||.|++|++- |. .+.. . -.+.+++..+.++|+|||+||..+.+.
T Consensus 190 ----------~~~~~fDlIi~d~~~---------p~-----~~~~--~--l~~~~~l~~~~~~LkpgG~lv~~~~~~ 238 (334)
T 1xj5_A 190 ----------AAEGSYDAVIVDSSD---------PI-----GPAK--E--LFEKPFFQSVARALRPGGVVCTQAESL 238 (334)
T ss_dssp ----------SCTTCEEEEEECCCC---------TT-----SGGG--G--GGSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred ----------ccCCCccEEEECCCC---------cc-----Ccch--h--hhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 001469999999861 10 1100 1 124678999999999999999986554
No 179
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=96.95 E-value=0.0024 Score=64.95 Aligned_cols=108 Identities=15% Similarity=0.141 Sum_probs=77.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh--CCCcEEEeecccccCCCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM--CTANLIVTNHEAQHFPGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl--g~~nv~vtn~Da~~~p~~~~~~~~~~~~ 78 (648)
++|++|.-+.+|++.+. +...|+++|+++.-+...+++++.. +.+++.+...|+..++....
T Consensus 43 iGcG~G~~~~~la~~~~--------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-------- 106 (299)
T 3g5t_A 43 VGCGPGTATLQMAQELK--------PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGA-------- 106 (299)
T ss_dssp ETCTTTHHHHHHHHHSS--------CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCT--------
T ss_pred ECCCCCHHHHHHHHhCC--------CCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcccc--------
Confidence 36899999999987642 2468999999999999999998886 35688889898877542100
Q ss_pred CcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
.......||.|++--. + .|- -..++|..+.++|||||+|+..+++.
T Consensus 107 -------~~~~~~~fD~V~~~~~------l--------~~~---------~~~~~l~~~~~~LkpgG~l~i~~~~~ 152 (299)
T 3g5t_A 107 -------DSVDKQKIDMITAVEC------A--------HWF---------DFEKFQRSAYANLRKDGTIAIWGYAD 152 (299)
T ss_dssp -------TTTTSSCEEEEEEESC------G--------GGS---------CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred -------ccccCCCeeEEeHhhH------H--------HHh---------CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 0001257999998432 1 111 12467899999999999999876653
No 180
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=96.94 E-value=0.00088 Score=70.12 Aligned_cols=106 Identities=13% Similarity=-0.005 Sum_probs=71.4
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh--C--CCcEEEeecccccCCCcccCCCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM--C--TANLIVTNHEAQHFPGCRANKNFSSA 77 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl--g--~~nv~vtn~Da~~~p~~~~~~~~~~~ 77 (648)
+++.|+-+..++.. .+.+.|+++|+|+.-++..++++.++ + .+++.+...|+..+...
T Consensus 116 G~G~G~~~~~l~~~---------~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~--------- 177 (314)
T 2b2c_A 116 GGGDGGILREVLKH---------ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN--------- 177 (314)
T ss_dssp SCTTSHHHHHHTTC---------TTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH---------
T ss_pred cCCcCHHHHHHHHc---------CCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh---------
Confidence 56778777776542 13579999999999999998887655 2 46788888887654210
Q ss_pred CCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 78 SDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 78 ~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++|++.. . .+. -+-.+.+++..+.++|+|||+||..+.+.
T Consensus 178 -----------~~~~fD~Ii~d~~~~-~-------------~~~----~~l~t~~~l~~~~~~LkpgG~lv~~~~~~ 225 (314)
T 2b2c_A 178 -----------HKNEFDVIITDSSDP-V-------------GPA----ESLFGQSYYELLRDALKEDGILSSQGESV 225 (314)
T ss_dssp -----------CTTCEEEEEECCC-------------------------------HHHHHHHHEEEEEEEEEECCCT
T ss_pred -----------cCCCceEEEEcCCCC-C-------------Ccc----hhhhHHHHHHHHHhhcCCCeEEEEECCCc
Confidence 125699999998621 0 110 01123678999999999999999987654
No 181
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=96.93 E-value=0.0012 Score=61.97 Aligned_cols=111 Identities=17% Similarity=0.120 Sum_probs=70.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..++.. +.|+|+|+++.-+.. ..++.+...|+....
T Consensus 30 ~GcG~G~~~~~l~~~------------~~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~-------------- 74 (170)
T 3q87_B 30 LGTSTGVITEQLRKR------------NTVVSTDLNIRALES---------HRGGNLVRADLLCSI-------------- 74 (170)
T ss_dssp ETCTTCHHHHHHTTT------------SEEEEEESCHHHHHT---------CSSSCEEECSTTTTB--------------
T ss_pred eccCccHHHHHHHhc------------CcEEEEECCHHHHhc---------ccCCeEEECChhhhc--------------
Confidence 367888777766442 289999999987765 456667777764410
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
....||.|++++|---... +.. |.... -...++.+.++.+ |||+++.++.+. ...
T Consensus 75 --------~~~~fD~i~~n~~~~~~~~----~~~---~~~~~------~~~~~~~~~~~~l-pgG~l~~~~~~~---~~~ 129 (170)
T 3q87_B 75 --------NQESVDVVVFNPPYVPDTD----DPI---IGGGY------LGREVIDRFVDAV-TVGMLYLLVIEA---NRP 129 (170)
T ss_dssp --------CGGGCSEEEECCCCBTTCC----CTT---TBCCG------GGCHHHHHHHHHC-CSSEEEEEEEGG---GCH
T ss_pred --------ccCCCCEEEECCCCccCCc----ccc---ccCCc------chHHHHHHHHhhC-CCCEEEEEEecC---CCH
Confidence 0157999999987321111 000 11110 0123566667777 999999988766 456
Q ss_pred HHHHHHHHhCC
Q 006372 161 AVVAEILRKCE 171 (648)
Q Consensus 161 aVV~~~L~~~~ 171 (648)
.-+..+|++.+
T Consensus 130 ~~l~~~l~~~g 140 (170)
T 3q87_B 130 KEVLARLEERG 140 (170)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHCC
Confidence 66777888765
No 182
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=96.90 E-value=0.0013 Score=68.59 Aligned_cols=109 Identities=15% Similarity=0.145 Sum_probs=74.2
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh-----CCCcEEEeecccccCCCcccCCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-----CTANLIVTNHEAQHFPGCRANKNFSS 76 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl-----g~~nv~vtn~Da~~~p~~~~~~~~~~ 76 (648)
+++.|+-+..++.. .+.+.|+++|+|+.-++..++++..+ ..+++.+...|+..+...
T Consensus 85 G~G~G~~~~~l~~~---------~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-------- 147 (314)
T 1uir_A 85 GGGEGATLREVLKH---------PTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER-------- 147 (314)
T ss_dssp ECTTSHHHHHHTTS---------TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH--------
T ss_pred cCCcCHHHHHHHhc---------CCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh--------
Confidence 56777777766542 13468999999999999999888763 257899999988764110
Q ss_pred CCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 77 ASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 77 ~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++|++... +. ..| ...| ...+++..+.++|||||+||..+.+.
T Consensus 148 ------------~~~~fD~Ii~d~~~~~-~~--~~~----------~~~l--~~~~~l~~~~~~LkpgG~lv~~~~~~ 198 (314)
T 1uir_A 148 ------------TEERYDVVIIDLTDPV-GE--DNP----------ARLL--YTVEFYRLVKAHLNPGGVMGMQTGMI 198 (314)
T ss_dssp ------------CCCCEEEEEEECCCCB-ST--TCG----------GGGG--SSHHHHHHHHHTEEEEEEEEEEEEEE
T ss_pred ------------cCCCccEEEECCCCcc-cc--cCc----------chhc--cHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 1256999999987321 00 000 0001 13567889999999999999876653
No 183
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=96.88 E-value=0.0032 Score=60.00 Aligned_cols=97 Identities=14% Similarity=0.065 Sum_probs=70.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+.+++.. ...|+++|.++.-+...+. .+.+++.+...|+..+.
T Consensus 53 iG~G~G~~~~~l~~~-----------~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~-------------- 103 (218)
T 3ou2_A 53 LASGTGYWTRHLSGL-----------ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWT-------------- 103 (218)
T ss_dssp ESCTTSHHHHHHHHH-----------SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCC--------------
T ss_pred ECCCCCHHHHHHHhc-----------CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccCC--------------
Confidence 368899988888776 2489999999987776655 66678888888876541
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++.. ++..-+ ......+|..+.++|||||+++.++.+.
T Consensus 104 --------~~~~~D~v~~~~------~l~~~~--------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 104 --------PDRQWDAVFFAH------WLAHVP--------------DDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp --------CSSCEEEEEEES------CGGGSC--------------HHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred --------CCCceeEEEEec------hhhcCC--------------HHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 125799999842 211111 1224678999999999999999998876
No 184
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=96.86 E-value=0.0017 Score=68.51 Aligned_cols=103 Identities=9% Similarity=-0.026 Sum_probs=74.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|.-+..+++. +.+.|+|+|.+ .-+...++++++.+..+ +.+...|+..++.
T Consensus 73 vGcG~G~~~~~la~~----------g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------ 129 (349)
T 3q7e_A 73 VGSGTGILCMFAAKA----------GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVEL------------ 129 (349)
T ss_dssp ESCTTSHHHHHHHHT----------TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCC------------
T ss_pred EeccchHHHHHHHHC----------CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccC------------
Confidence 368889888777664 24689999999 48888888899888865 8888888776531
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
...+||.|+++....... +. .....+|..+.++|||||+++.+.+++
T Consensus 130 ---------~~~~fD~Iis~~~~~~l~----~~---------------~~~~~~l~~~~r~LkpgG~li~~~~~~ 176 (349)
T 3q7e_A 130 ---------PVEKVDIIISEWMGYCLF----YE---------------SMLNTVLHARDKWLAPDGLIFPDRATL 176 (349)
T ss_dssp ---------SSSCEEEEEECCCBBTBT----BT---------------CCHHHHHHHHHHHEEEEEEEESCEEEE
T ss_pred ---------CCCceEEEEEcccccccc----Cc---------------hhHHHHHHHHHHhCCCCCEEccccceE
Confidence 025799999976422111 00 012356777889999999999888775
No 185
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=96.84 E-value=0.00098 Score=69.05 Aligned_cols=123 Identities=14% Similarity=0.085 Sum_probs=79.5
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh----CCCcEEEeecccccCCCcccCCCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM----CTANLIVTNHEAQHFPGCRANKNFSSA 77 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl----g~~nv~vtn~Da~~~p~~~~~~~~~~~ 77 (648)
+++.|+-+..++.. .+.+.|+++|+|+.-+...++++..+ ..+++.+...|+..++...
T Consensus 103 G~G~G~~~~~l~~~---------~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-------- 165 (304)
T 3bwc_A 103 GGGDGGVLREVLRH---------GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT-------- 165 (304)
T ss_dssp ECTTSHHHHHHHTC---------TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS--------
T ss_pred cCCCCHHHHHHHhC---------CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc--------
Confidence 57788887777543 12468999999999999988877542 3467889988887653200
Q ss_pred CCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC-Cc
Q 006372 78 SDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM-NP 156 (648)
Q Consensus 78 ~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl-~p 156 (648)
....||.|++|.+-.. + | . .+-.+.+++..+.++|||||+||..+.+. ..
T Consensus 166 -----------~~~~fDvIi~d~~~~~-~-----~-------~-----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~ 216 (304)
T 3bwc_A 166 -----------PDNTYDVVIIDTTDPA-G-----P-------A-----SKLFGEAFYKDVLRILKPDGICCNQGESIWLD 216 (304)
T ss_dssp -----------CTTCEEEEEEECC---------------------------CCHHHHHHHHHHEEEEEEEEEEECCTTTC
T ss_pred -----------cCCceeEEEECCCCcc-c-----c-------c-----hhhhHHHHHHHHHHhcCCCcEEEEecCCcccc
Confidence 1257999999986310 0 0 0 01123678899999999999999875542 22
Q ss_pred cccHHHHHHHHHhC
Q 006372 157 VENEAVVAEILRKC 170 (648)
Q Consensus 157 ~ENEaVV~~~L~~~ 170 (648)
.+...-+...|++.
T Consensus 217 ~~~~~~~~~~l~~~ 230 (304)
T 3bwc_A 217 LELIEKMSRFIRET 230 (304)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhC
Confidence 23334445555554
No 186
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=96.83 E-value=0.0011 Score=65.63 Aligned_cols=105 Identities=16% Similarity=0.153 Sum_probs=70.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHH----HHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRC----NLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSS 76 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~----~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~ 76 (648)
++|++|.-+..|+.. .+.+.|+++|.++..+ ...+.++++.+.+|+.+...|+..+|...
T Consensus 31 iGCG~G~~~~~la~~---------~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~------- 94 (225)
T 3p2e_A 31 LGTGDGRNIYKLAIN---------DQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFEL------- 94 (225)
T ss_dssp ETCTTSHHHHHHHHT---------CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGG-------
T ss_pred EeccCcHHHHHHHHh---------CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhc-------
Confidence 368899988888753 1467999999996655 44466667788889999998887764210
Q ss_pred CCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 77 ASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 77 ~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
...||.|.+-.| |.. ........+..+|....++|||||+++.++
T Consensus 95 -------------~d~v~~i~~~~~----------------~~~-~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 95 -------------KNIADSISILFP----------------WGT-LLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp -------------TTCEEEEEEESC----------------CHH-HHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred -------------cCeEEEEEEeCC----------------CcH-HhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 134666766554 111 000011112457899999999999999844
No 187
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=96.81 E-value=0.0012 Score=71.83 Aligned_cols=74 Identities=8% Similarity=0.047 Sum_probs=59.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh--CCCcEEEeecccccCCCcccCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM--CTANLIVTNHEAQHFPGCRANKNFSSAS 78 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl--g~~nv~vtn~Da~~~p~~~~~~~~~~~~ 78 (648)
+||+.|..+..++.. .+.|+++|+|+..+.+.++|++++ |..++.+.+.|+..+...
T Consensus 100 LgcG~G~~al~LA~~-----------g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~---------- 158 (410)
T 3ll7_A 100 LTGGLGIDFIALMSK-----------ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPL---------- 158 (410)
T ss_dssp SSCSSSHHHHHHHTT-----------CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHH----------
T ss_pred eCCCchHHHHHHHhc-----------CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhh----------
Confidence 589999999887653 358999999999999999999999 888899999998764210
Q ss_pred CcCcccccccccccccEEEEcCCCCC
Q 006372 79 DKGIESESNMGQLLFDRVLCDVPCSG 104 (648)
Q Consensus 79 ~~~~~~~~~~~~~~FDrILlDvPCSG 104 (648)
.....||.|++|||=.+
T Consensus 159 ---------~~~~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 159 ---------IKTFHPDYIYVDPARRS 175 (410)
T ss_dssp ---------HHHHCCSEEEECCEEC-
T ss_pred ---------ccCCCceEEEECCCCcC
Confidence 01146999999999544
No 188
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=96.80 E-value=0.0025 Score=64.50 Aligned_cols=100 Identities=12% Similarity=0.068 Sum_probs=73.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..+++.+. ....|+++|+++.-+...++++...+. ++.+...|+..+|.
T Consensus 29 iGcG~G~~~~~l~~~~~--------~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~------------- 86 (284)
T 3gu3_A 29 YGCGYGYLGLVLMPLLP--------EGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIEL------------- 86 (284)
T ss_dssp ETCTTTHHHHHHTTTSC--------TTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCC-------------
T ss_pred ecCCCCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCc-------------
Confidence 36889988888866532 136899999999999999888877665 78888888776431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
...||.|++... +..-++ ...+|.++.++|||||+|+.....
T Consensus 87 ---------~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 ---------NDKYDIAICHAF------LLHMTT----------------PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ---------SSCEEEEEEESC------GGGCSS----------------HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ---------CCCeeEEEECCh------hhcCCC----------------HHHHHHHHHHHcCCCCEEEEEecc
Confidence 146999998642 111111 136799999999999999987766
No 189
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=96.80 E-value=0.0023 Score=62.99 Aligned_cols=94 Identities=16% Similarity=0.139 Sum_probs=67.4
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-|..++.. .+.|+++|.++..+...++++ ..+.+++.+...|+..+|.
T Consensus 47 G~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~-------------- 100 (263)
T 2yqz_A 47 GVGTGRIALPLIAR-----------GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPL-------------- 100 (263)
T ss_dssp TCTTSTTHHHHHTT-----------TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCS--------------
T ss_pred CCcCCHHHHHHHHC-----------CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCC--------------
Confidence 67888888877653 258999999999988888776 3445788888888766531
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEe
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYS 150 (648)
....||.|++-.. + .|-+. ...+|.++.++|||||+++.+
T Consensus 101 -------~~~~fD~v~~~~~------l--------~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 101 -------PDESVHGVIVVHL------W--------HLVPD--------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp -------CTTCEEEEEEESC------G--------GGCTT--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred -------CCCCeeEEEECCc------h--------hhcCC--------HHHHHHHHHHHCCCCcEEEEE
Confidence 1156999998422 1 11110 246789999999999999987
No 190
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=96.79 E-value=0.0021 Score=67.07 Aligned_cols=116 Identities=12% Similarity=0.024 Sum_probs=79.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|++|.-+..+++. +.+.|+|+|.+ .-+..++++++..+.. ++.+...|+..++.
T Consensus 46 GcGtG~ls~~la~~----------g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------------- 101 (328)
T 1g6q_1 46 GCGTGILSMFAAKH----------GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL------------- 101 (328)
T ss_dssp TCTTSHHHHHHHHT----------CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC-------------
T ss_pred cCccHHHHHHHHHC----------CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC-------------
Confidence 67888877776653 23589999999 5788888888888875 58888888766431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC--Cccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM--NPVE 158 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl--~p~E 158 (648)
...+||.|+++.+..... +.. ....+|..+.++|||||+++.++|++ .+.+
T Consensus 102 --------~~~~~D~Ivs~~~~~~l~----~~~---------------~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~ 154 (328)
T 1g6q_1 102 --------PFPKVDIIISEWMGYFLL----YES---------------MMDTVLYARDHYLVEGGLIFPDKCSIHLAGLE 154 (328)
T ss_dssp --------SSSCEEEEEECCCBTTBS----TTC---------------CHHHHHHHHHHHEEEEEEEESCEEEEEEEEEC
T ss_pred --------CCCcccEEEEeCchhhcc----cHH---------------HHHHHHHHHHhhcCCCeEEEEeeceEEEEEec
Confidence 015699999987632211 000 01246777789999999999888775 4556
Q ss_pred cHHHHHHHHH
Q 006372 159 NEAVVAEILR 168 (648)
Q Consensus 159 NEaVV~~~L~ 168 (648)
........+.
T Consensus 155 ~~~~~~~~~~ 164 (328)
T 1g6q_1 155 DSQYKDEKLN 164 (328)
T ss_dssp CHHHHHHHHH
T ss_pred Cchhhhhhhc
Confidence 6554444443
No 191
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=96.75 E-value=0.0056 Score=62.31 Aligned_cols=127 Identities=14% Similarity=0.091 Sum_probs=75.9
Q ss_pred CcccchHHHHHHHHHH---hc-CCCCCCCCCEEEEEEcCChHHHHHH--------------HHHHHH------------h
Q 006372 1 MCAAPGSKTFQLLEII---HQ-STNPGALPNGMVIANDLDVQRCNLL--------------IHQTKR------------M 50 (648)
Q Consensus 1 mCAAPGgKT~qlae~l---~~-~~~~~~~~~G~ViAnD~d~kR~~~L--------------~~~lkR------------l 50 (648)
.|.+.|--++.+++.. .. ... +......++++|.++-..+.| +..++. +
T Consensus 67 iGfGtG~n~l~~~~~~~~~~~~~p~-~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~~r~~~ 145 (257)
T 2qy6_A 67 SGFGTGLNFLTLWQAFDQFREAHPQ-AQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLL 145 (257)
T ss_dssp SCCTTSHHHHHHHHHHHHHHHHCTT-SSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEEEEEEE
T ss_pred ECCChHHHHHHHHHHHHhhhhhCCC-CCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccchhheec
Confidence 3677888887777764 11 100 000136899999988332222 222332 1
Q ss_pred --CCCcEEEeecccccC-CCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhH
Q 006372 51 --CTANLIVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLH 127 (648)
Q Consensus 51 --g~~nv~vtn~Da~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~ 127 (648)
+..++.+...|+... +.+. ......||.|++|+- .-.++|++|.
T Consensus 146 ~~~~~~l~l~~GDa~~~l~~~~-----------------~~~~~~~D~iflD~f-----sp~~~p~lw~----------- 192 (257)
T 2qy6_A 146 DEGRVTLDLWFGDINELISQLD-----------------DSLNQKVDAWFLDGF-----APAKNPDMWT----------- 192 (257)
T ss_dssp C--CEEEEEEESCHHHHGGGSC-----------------GGGTTCEEEEEECSS-----CTTTCGGGCC-----------
T ss_pred cCCceEEEEEECcHHHHHhhcc-----------------cccCCeEEEEEECCC-----CcccChhhcC-----------
Confidence 123567778887663 2210 000126999999971 1246888765
Q ss_pred HHHHHHHHHHhhccccCcEEEEecccCCccccHHHHHHHHHhCC
Q 006372 128 SLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 171 (648)
Q Consensus 128 ~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENEaVV~~~L~~~~ 171 (648)
..+|....++|+|||+|+--||+ .+|...|...|
T Consensus 193 ---~~~l~~l~~~L~pGG~l~tysaa-------~~vrr~L~~aG 226 (257)
T 2qy6_A 193 ---QNLFNAMARLARPGGTLATFTSA-------GFVRRGLQEAG 226 (257)
T ss_dssp ---HHHHHHHHHHEEEEEEEEESCCB-------HHHHHHHHHHT
T ss_pred ---HHHHHHHHHHcCCCcEEEEEeCC-------HHHHHHHHHCC
Confidence 35788899999999999843332 47888888765
No 192
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=96.73 E-value=0.0041 Score=60.37 Aligned_cols=100 Identities=14% Similarity=0.083 Sum_probs=70.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-+.+++.. ..|+++|.++..+...++++...+ .++.+...|+..++.
T Consensus 41 G~G~G~~~~~l~~~------------~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~-------------- 93 (243)
T 3d2l_A 41 GCGTGTATLLLADH------------YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELEL-------------- 93 (243)
T ss_dssp SCTTCHHHHHHTTT------------SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCC--------------
T ss_pred cCCCCHHHHHHhhC------------CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCC--------------
Confidence 67888877766432 479999999999999999888776 467777777655431
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
...||.|++... ++..- .+ ......+|.++.++|||||+++.++.+.
T Consensus 94 --------~~~fD~v~~~~~-----~~~~~------~~-------~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 94 --------PEPVDAITILCD-----SLNYL------QT-------EADVKQTFDSAARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp --------SSCEEEEEECTT-----GGGGC------CS-------HHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred --------CCCcCEEEEeCC-----chhhc------CC-------HHHHHHHHHHHHHhcCCCeEEEEEcCCH
Confidence 146999998531 11000 01 1233567899999999999999887654
No 193
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=96.73 E-value=0.00091 Score=65.36 Aligned_cols=102 Identities=16% Similarity=0.153 Sum_probs=70.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccc-cCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQ-HFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~-~~p~~~~~~~~~~~~~ 79 (648)
++|++|..+.+++.. ...|+++|.++.-+...+++ .+++.+...|+. .+|.
T Consensus 55 iGcG~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~------------ 106 (226)
T 3m33_A 55 AGCGHGPDAARFGPQ-----------AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPA------------ 106 (226)
T ss_dssp ESCTTSHHHHHHGGG-----------SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCT------------
T ss_pred eCCCCCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCC------------
Confidence 378899988887664 24899999999888877665 457778888773 2221
Q ss_pred cCcccccccc-cccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc
Q 006372 80 KGIESESNMG-QLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE 158 (648)
Q Consensus 80 ~~~~~~~~~~-~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E 158 (648)
. ...||.|++.. + +..+|.++.++|||||+|+... ...
T Consensus 107 ---------~~~~~fD~v~~~~----------~------------------~~~~l~~~~~~LkpgG~l~~~~----~~~ 145 (226)
T 3m33_A 107 ---------GLGAPFGLIVSRR----------G------------------PTSVILRLPELAAPDAHFLYVG----PRL 145 (226)
T ss_dssp ---------TCCCCEEEEEEES----------C------------------CSGGGGGHHHHEEEEEEEEEEE----SSS
T ss_pred ---------cCCCCEEEEEeCC----------C------------------HHHHHHHHHHHcCCCcEEEEeC----CcC
Confidence 1 25699999751 1 1234667888999999999322 223
Q ss_pred cHHHHHHHHHhCC
Q 006372 159 NEAVVAEILRKCE 171 (648)
Q Consensus 159 NEaVV~~~L~~~~ 171 (648)
+...+..+|.+.+
T Consensus 146 ~~~~~~~~l~~~G 158 (226)
T 3m33_A 146 NVPEVPERLAAVG 158 (226)
T ss_dssp CCTHHHHHHHHTT
T ss_pred CHHHHHHHHHHCC
Confidence 4456777888776
No 194
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=96.72 E-value=0.0024 Score=67.13 Aligned_cols=110 Identities=9% Similarity=-0.000 Sum_probs=75.9
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|+.|.-+..+++. +.+.|+|+|.++ -+...++++++.+. .++.+...|+..++.
T Consensus 72 GcGtG~ls~~la~~----------g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------------- 127 (340)
T 2fyt_A 72 GCGTGILSMFAAKA----------GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL------------- 127 (340)
T ss_dssp TCTTSHHHHHHHHT----------TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC-------------
T ss_pred eccCcHHHHHHHHc----------CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC-------------
Confidence 57888877777653 135899999996 78888888988887 689999888766431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC--Cccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM--NPVE 158 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl--~p~E 158 (648)
...+||.|+++..... . .+. .....+|..+.++|||||+++-+.|++ .+.+
T Consensus 128 --------~~~~~D~Ivs~~~~~~--l--~~~---------------~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~ 180 (340)
T 2fyt_A 128 --------PVEKVDVIISEWMGYF--L--LFE---------------SMLDSVLYAKNKYLAKGGSVYPDICTISLVAVS 180 (340)
T ss_dssp --------SCSCEEEEEECCCBTT--B--TTT---------------CHHHHHHHHHHHHEEEEEEEESCEEEEEEEEEC
T ss_pred --------CCCcEEEEEEcCchhh--c--cCH---------------HHHHHHHHHHHhhcCCCcEEEcccceEEEEEec
Confidence 0156999998752111 0 000 012356788889999999999777664 3455
Q ss_pred cHHH
Q 006372 159 NEAV 162 (648)
Q Consensus 159 NEaV 162 (648)
+...
T Consensus 181 ~~~~ 184 (340)
T 2fyt_A 181 DVNK 184 (340)
T ss_dssp CHHH
T ss_pred chhH
Confidence 5544
No 195
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.71 E-value=0.00051 Score=70.16 Aligned_cols=117 Identities=14% Similarity=0.129 Sum_probs=67.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC------cEEEe--ecccccCCCcccCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA------NLIVT--NHEAQHFPGCRANK 72 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~------nv~vt--n~Da~~~p~~~~~~ 72 (648)
+|||||+.|..+++. +.|+|+|+++- +. .++....+ ++.+. ..|+..++
T Consensus 81 lGcGtG~~s~~la~~------------~~V~gvD~s~m----~~-~a~~~~~~~~~~~~~v~~~~~~~D~~~l~------ 137 (265)
T 2oxt_A 81 LGCGRGGWSYYAASR------------PHVMDVRAYTL----GV-GGHEVPRITESYGWNIVKFKSRVDIHTLP------ 137 (265)
T ss_dssp ESCTTSHHHHHHHTS------------TTEEEEEEECC----CC-SSCCCCCCCCBTTGGGEEEECSCCTTTSC------
T ss_pred eCcCCCHHHHHHHHc------------CcEEEEECchh----hh-hhhhhhhhhhccCCCeEEEecccCHhHCC------
Confidence 589999999877653 46999999873 10 01001111 55656 66665532
Q ss_pred CCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCc--EEEEe
Q 006372 73 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG--RIVYS 150 (648)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG--~LVYS 150 (648)
...||.|++|.. ...|. |... +..+..+|..+.++||||| .+|..
T Consensus 138 -----------------~~~fD~V~sd~~-~~~~~----------~~~d-----~~~~l~~L~~~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 138 -----------------VERTDVIMCDVG-ESSPK----------WSVE-----SERTIKILELLEKWKVKNPSADFVVK 184 (265)
T ss_dssp -----------------CCCCSEEEECCC-CCCSC----------HHHH-----HHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred -----------------CCCCcEEEEeCc-ccCCc----------cchh-----HHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 146999999976 32331 1000 1112337888889999999 88876
Q ss_pred cccCCccccH--HHHHHHHHhCCCceEE
Q 006372 151 TCSMNPVENE--AVVAEILRKCEGSVEL 176 (648)
Q Consensus 151 TCSl~p~ENE--aVV~~~L~~~~g~veL 176 (648)
+-. |...+ +.+..+.+.++ .+.+
T Consensus 185 v~~--~~~~~~~~~l~~l~~~f~-~v~~ 209 (265)
T 2oxt_A 185 VLC--PYSVEVMERLSVMQRKWG-GGLV 209 (265)
T ss_dssp ESC--TTSHHHHHHHHHHHHHHC-CEEE
T ss_pred eCC--CCChhHHHHHHHHHHHcC-CEEE
Confidence 533 43331 44444444443 3443
No 196
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=96.68 E-value=0.0051 Score=58.67 Aligned_cols=94 Identities=14% Similarity=0.032 Sum_probs=60.2
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-+..++.. ...|+++|.++.-+...+++ .++.+...|...+.....
T Consensus 60 G~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~----------- 111 (227)
T 3e8s_A 60 GCGEGWLLRALADR-----------GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKV----------- 111 (227)
T ss_dssp TCTTCHHHHHHHTT-----------TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCS-----------
T ss_pred CCCCCHHHHHHHHC-----------CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhccccc-----------
Confidence 57888888777554 24799999998877766554 333444455444311000
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
.....||.|++...-- .++ ...+|..+.++|||||+|+.++-
T Consensus 112 ------~~~~~fD~v~~~~~l~-------~~~----------------~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 112 ------PVGKDYDLICANFALL-------HQD----------------IIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp ------CCCCCEEEEEEESCCC-------SSC----------------CHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ------ccCCCccEEEECchhh-------hhh----------------HHHHHHHHHHHhCCCeEEEEEec
Confidence 1124599999854311 111 13578899999999999999875
No 197
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=96.65 E-value=0.0046 Score=59.87 Aligned_cols=98 Identities=10% Similarity=0.063 Sum_probs=67.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..++... ..|+++|.++.-+...++++ +++.+...|+..++.
T Consensus 47 iG~G~G~~~~~l~~~~-----------~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~------------- 97 (239)
T 3bxo_A 47 VACGTGTHLEHFTKEF-----------GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRL------------- 97 (239)
T ss_dssp ETCTTSHHHHHHHHHH-----------SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCC-------------
T ss_pred ecccCCHHHHHHHHhC-----------CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHccc-------------
Confidence 3688999998887762 27999999998887776543 456777777665431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
...||.|+|-. +++..-+ + ..-...+|.++.++|||||+++.+++..
T Consensus 98 ---------~~~~D~v~~~~-----~~~~~~~------~-------~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 98 ---------GRKFSAVVSMF-----SSVGYLK------T-------TEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp ---------SSCEEEEEECT-----TGGGGCC------S-------HHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred ---------CCCCcEEEEcC-----chHhhcC------C-------HHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 14699999611 1111100 1 1234678999999999999999998765
No 198
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=96.64 E-value=0.0023 Score=64.43 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=72.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC----CcEEEeecccccCCCcccCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT----ANLIVTNHEAQHFPGCRANKNFSS 76 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~----~nv~vtn~Da~~~p~~~~~~~~~~ 76 (648)
++|++|.-+..+++. ...|+++|+++.-+...++++...+. .++.+...|+..++...
T Consensus 64 iGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~------- 125 (293)
T 3thr_A 64 VACGTGVDSIMLVEE-----------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV------- 125 (293)
T ss_dssp TTCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS-------
T ss_pred ecCCCCHHHHHHHHC-----------CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccc-------
Confidence 478999998888764 23899999999999888877654332 35666666665543100
Q ss_pred CCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 77 ASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 77 ~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
.....||.|++-.. ++..-++++.. .....++|.++.++|||||+++.+++..
T Consensus 126 -----------~~~~~fD~V~~~g~-----~l~~~~~~~~~---------~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 126 -----------PAGDGFDAVICLGN-----SFAHLPDSKGD---------QSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp -----------CCTTCEEEEEECTT-----CGGGSCCSSSS---------SHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred -----------ccCCCeEEEEEcCh-----HHhhcCccccC---------HHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 11257999998311 12112221110 1234678999999999999999998864
No 199
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.59 E-value=0.00075 Score=69.37 Aligned_cols=97 Identities=15% Similarity=0.092 Sum_probs=59.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC------cEEEe--ecccccCCCcccCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA------NLIVT--NHEAQHFPGCRANK 72 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~------nv~vt--n~Da~~~p~~~~~~ 72 (648)
+|||||+.|..+++. +.|+|+|+++- +. .+++.... ++.+. ..|+..+|
T Consensus 89 lGcGtG~~s~~la~~------------~~V~gVD~s~m----~~-~a~~~~~~~~~~~~~v~~~~~~~D~~~l~------ 145 (276)
T 2wa2_A 89 LGCGRGSWSYYAASQ------------PNVREVKAYTL----GT-SGHEKPRLVETFGWNLITFKSKVDVTKME------ 145 (276)
T ss_dssp ESCTTCHHHHHHHTS------------TTEEEEEEECC----CC-TTSCCCCCCCCTTGGGEEEECSCCGGGCC------
T ss_pred eccCCCHHHHHHHHc------------CCEEEEECchh----hh-hhhhchhhhhhcCCCeEEEeccCcHhhCC------
Confidence 489999999887653 46999999873 10 11111111 55666 66665542
Q ss_pred CCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCc--EEEEe
Q 006372 73 NFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGG--RIVYS 150 (648)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG--~LVYS 150 (648)
...||.|++|.. ...|. +. .. +..+..+|..+.++||||| .+|..
T Consensus 146 -----------------~~~fD~Vvsd~~-~~~~~----~~------~d-----~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 146 -----------------PFQADTVLCDIG-ESNPT----AA------VE-----ASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp -----------------CCCCSEEEECCC-CCCSC----HH------HH-----HHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred -----------------CCCcCEEEECCC-cCCCc----hh------hh-----HHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 146999999976 33331 10 00 1112337888889999999 88876
Q ss_pred ccc
Q 006372 151 TCS 153 (648)
Q Consensus 151 TCS 153 (648)
+-+
T Consensus 193 ~~~ 195 (276)
T 2wa2_A 193 VLN 195 (276)
T ss_dssp ESC
T ss_pred eCC
Confidence 543
No 200
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=96.59 E-value=0.0043 Score=60.12 Aligned_cols=100 Identities=14% Similarity=0.065 Sum_probs=69.5
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-+..+++. ...|+++|.++..+...++++...+. ++.+...|+..++.
T Consensus 45 G~G~G~~~~~l~~~-----------~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~-------------- 98 (246)
T 1y8c_A 45 ACGTGNLTENLCPK-----------FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNI-------------- 98 (246)
T ss_dssp TCTTSTTHHHHGGG-----------SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCC--------------
T ss_pred CCCCCHHHHHHHHC-----------CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCc--------------
Confidence 57788877776553 23799999999999999998887765 67777777665431
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
...||.|++..- ++..-+ + ..-...+|.++.++|||||+++.++-.
T Consensus 99 --------~~~fD~v~~~~~-----~l~~~~------~-------~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 99 --------NRKFDLITCCLD-----STNYII------D-------SDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp --------SCCEEEEEECTT-----GGGGCC------S-------HHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred --------cCCceEEEEcCc-----cccccC------C-------HHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 146999998420 111000 0 012457799999999999999986653
No 201
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=96.58 E-value=0.0029 Score=67.42 Aligned_cols=110 Identities=10% Similarity=-0.015 Sum_probs=77.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|+.|.-+..+++. +...|+|+|.+ .-+..++++++..+..+ +.+...|+..++.
T Consensus 70 lGcGtG~ls~~la~~----------g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------ 126 (376)
T 3r0q_C 70 VGTGSGILAIWSAQA----------GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL------------ 126 (376)
T ss_dssp ESCTTTHHHHHHHHT----------TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC------------
T ss_pred eccCcCHHHHHHHhc----------CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc------------
Confidence 367888887777664 13489999999 88999999999988864 8888888766531
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc--CCcc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS--MNPV 157 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS--l~p~ 157 (648)
..+||.|+++....... +.. ....+|....++|||||+|+.+.++ +.|.
T Consensus 127 ----------~~~~D~Iv~~~~~~~l~----~e~---------------~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~ 177 (376)
T 3r0q_C 127 ----------PEKVDVIISEWMGYFLL----RES---------------MFDSVISARDRWLKPTGVMYPSHARMWLAPI 177 (376)
T ss_dssp ----------SSCEEEEEECCCBTTBT----TTC---------------THHHHHHHHHHHEEEEEEEESSEEEEEEEEE
T ss_pred ----------CCcceEEEEcChhhccc----chH---------------HHHHHHHHHHhhCCCCeEEEEecCeEEEEee
Confidence 15699999976321111 000 1234677778999999999998887 4455
Q ss_pred ccHHH
Q 006372 158 ENEAV 162 (648)
Q Consensus 158 ENEaV 162 (648)
+++..
T Consensus 178 ~~~~~ 182 (376)
T 3r0q_C 178 KSNIA 182 (376)
T ss_dssp CCTHH
T ss_pred cchHH
Confidence 55543
No 202
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=96.58 E-value=0.0092 Score=54.90 Aligned_cols=113 Identities=14% Similarity=0.132 Sum_probs=74.2
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-+..++.. .+.|+++|.++..+...+++ .+++.+...| ..++
T Consensus 25 G~G~G~~~~~l~~~-----------~~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d-~~~~--------------- 72 (170)
T 3i9f_A 25 GCGNGFYCKYLLEF-----------ATKLYCIDINVIALKEVKEK-----FDSVITLSDP-KEIP--------------- 72 (170)
T ss_dssp TCTTCTTHHHHHTT-----------EEEEEEECSCHHHHHHHHHH-----CTTSEEESSG-GGSC---------------
T ss_pred CCCCCHHHHHHHhh-----------cCeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC-CCCC---------------
Confidence 67888888777653 24899999999888877765 4577777766 1111
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccc---
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVE--- 158 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~E--- 158 (648)
...||.|++... +..-++ ...+|.++.++|||||+++.++.......
T Consensus 73 --------~~~~D~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~ 122 (170)
T 3i9f_A 73 --------DNSVDFILFANS------FHDMDD----------------KQHVISEVKRILKDDGRVIIIDWRKENTGIGP 122 (170)
T ss_dssp --------TTCEEEEEEESC------STTCSC----------------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS
T ss_pred --------CCceEEEEEccc------hhcccC----------------HHHHHHHHHHhcCCCCEEEEEEcCccccccCc
Confidence 156999997532 111011 24678999999999999999987654222
Q ss_pred ------cHHHHHHHHHhCCCceEEEeCC
Q 006372 159 ------NEAVVAEILRKCEGSVELVDVS 180 (648)
Q Consensus 159 ------NEaVV~~~L~~~~g~veLvd~s 180 (648)
..+-+..+|+ .|+++.+.
T Consensus 123 ~~~~~~~~~~~~~~l~----Gf~~~~~~ 146 (170)
T 3i9f_A 123 PLSIRMDEKDYMGWFS----NFVVEKRF 146 (170)
T ss_dssp CGGGCCCHHHHHHHTT----TEEEEEEE
T ss_pred hHhhhcCHHHHHHHHh----CcEEEEcc
Confidence 2444555555 35655543
No 203
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=96.57 E-value=0.0038 Score=63.78 Aligned_cols=41 Identities=10% Similarity=0.055 Sum_probs=31.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC 51 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg 51 (648)
+|++|.-|..|+..+. ...|+++|+|+.-+...+++++.++
T Consensus 54 GCG~G~~~~~la~~~~---------~~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 54 GCNVGHLTLSIACKWG---------PSRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp SCTTCHHHHHHHHHTC---------CSEEEEEESCHHHHHHHHHTC----
T ss_pred CCCCCHHHHHHHHHcC---------CCEEEEECCCHHHHHHHHHHHHhhh
Confidence 6889999999988642 3589999999998888888776654
No 204
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=96.54 E-value=0.022 Score=59.57 Aligned_cols=98 Identities=15% Similarity=0.112 Sum_probs=72.5
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+++.|.-+..+++.. +...++++|+ +.-+...++++.+.+.. ++.+...|... + +
T Consensus 190 G~G~G~~~~~l~~~~---------~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~---~---------- 245 (374)
T 1qzz_A 190 GGGNGGMLAAIALRA---------PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-P---L---------- 245 (374)
T ss_dssp TCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C---C----------
T ss_pred CCCcCHHHHHHHHHC---------CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-c---C----------
Confidence 688999888888763 3468999999 99999999999888875 78888887643 1 0
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
...||.|++.-. ...|.. ....++|.++.+.|||||+|+....
T Consensus 246 ---------~~~~D~v~~~~v-------------l~~~~~-------~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 ---------PVTADVVLLSFV-------------LLNWSD-------EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ---------SCCEEEEEEESC-------------GGGSCH-------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ---------CCCCCEEEEecc-------------ccCCCH-------HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 023999998431 223332 1235789999999999999988776
No 205
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=96.54 E-value=0.0036 Score=60.83 Aligned_cols=96 Identities=16% Similarity=0.044 Sum_probs=65.8
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|..+.+++.. +.+.|+++|.++..+...++++ ...++.+...|+..++.
T Consensus 50 iG~G~G~~~~~l~~~----------~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~------------- 103 (243)
T 3bkw_A 50 LGCGFGWFCRWAHEH----------GASYVLGLDLSEKMLARARAAG---PDTGITYERADLDKLHL------------- 103 (243)
T ss_dssp ETCTTCHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHTS---CSSSEEEEECCGGGCCC-------------
T ss_pred EcCcCCHHHHHHHHC----------CCCeEEEEcCCHHHHHHHHHhc---ccCCceEEEcChhhccC-------------
Confidence 368889988887664 1238999999988777766543 23467777777765431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
....||.|++... +..-+ -...+|.++.++|||||+++.++-
T Consensus 104 --------~~~~fD~v~~~~~------l~~~~----------------~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 104 --------PQDSFDLAYSSLA------LHYVE----------------DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp --------CTTCEEEEEEESC------GGGCS----------------CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------CCCCceEEEEecc------ccccc----------------hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 1256999998432 11111 124678999999999999999874
No 206
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.54 E-value=0.0032 Score=69.57 Aligned_cols=111 Identities=11% Similarity=0.081 Sum_probs=77.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++|+.|.-+..+++. +...|+|+|.+. .+...++++++.|. .++.+...|...++.
T Consensus 165 iGcGtG~la~~la~~----------~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~------------ 221 (480)
T 3b3j_A 165 VGCGSGILSFFAAQA----------GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL------------ 221 (480)
T ss_dssp ESCSTTHHHHHHHHT----------TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC------------
T ss_pred ecCcccHHHHHHHHc----------CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc------------
Confidence 368889877766552 245899999998 78888999999998 579999888765421
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC--Ccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM--NPV 157 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl--~p~ 157 (648)
..+||.|++.++ +. -|.. .....+|..+.++|||||+|+-+.+++ .|.
T Consensus 222 ----------~~~fD~Ivs~~~----~~---------~~~~-------e~~~~~l~~~~~~LkpgG~li~~~~~~~~~pi 271 (480)
T 3b3j_A 222 ----------PEQVDIIISEPM----GY---------MLFN-------ERMLESYLHAKKYLKPSGNMFPTIGDVHLAPF 271 (480)
T ss_dssp ----------SSCEEEEECCCC----HH---------HHTC-------HHHHHHHHHGGGGEEEEEEEESCEEEEEEEEE
T ss_pred ----------CCCeEEEEEeCc----hH---------hcCc-------HHHHHHHHHHHHhcCCCCEEEEEeceeeeecc
Confidence 146999999765 11 0111 122445678899999999999777664 456
Q ss_pred ccHHHHH
Q 006372 158 ENEAVVA 164 (648)
Q Consensus 158 ENEaVV~ 164 (648)
+.+....
T Consensus 272 ~~~~l~~ 278 (480)
T 3b3j_A 272 TDEQLYM 278 (480)
T ss_dssp CCHHHHH
T ss_pred CchHHHH
Confidence 6665543
No 207
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=96.54 E-value=0.017 Score=59.36 Aligned_cols=102 Identities=16% Similarity=0.101 Sum_probs=73.8
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|++|.-+..+++.. |...++++|.+ .-+...++++.+.+.. ++.+...|....+.
T Consensus 173 G~G~G~~~~~l~~~~---------p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------- 229 (335)
T 2r3s_A 173 SASHGLFGIAVAQHN---------PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY------------- 229 (335)
T ss_dssp TCTTCHHHHHHHHHC---------TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC-------------
T ss_pred CCCcCHHHHHHHHHC---------CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC-------------
Confidence 678898888887763 35689999999 8899999999888875 58888887654320
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
...||.|++-- +...|.. ....++|.++.+.|+|||+|+.......
T Consensus 230 ---------~~~~D~v~~~~-------------~l~~~~~-------~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 230 ---------GNDYDLVLLPN-------------FLHHFDV-------ATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp ---------CSCEEEEEEES-------------CGGGSCH-------HHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred ---------CCCCcEEEEcc-------------hhccCCH-------HHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 12399999821 1122321 2246789999999999998888766544
No 208
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=96.50 E-value=0.012 Score=66.05 Aligned_cols=151 Identities=13% Similarity=0.040 Sum_probs=87.9
Q ss_pred CcccchHHHHHHHHHHhcCCC-CCC-----CCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTN-PGA-----LPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKN 73 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~-~~~-----~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~ 73 (648)
.||+.|+...+++..+..... ... .....|+++|+++.-+.+.+.++...|.. ++.+.+.|+...+.
T Consensus 251 PaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~------ 324 (544)
T 3khk_A 251 PAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ------ 324 (544)
T ss_dssp SSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS------
T ss_pred cccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc------
Confidence 389999999988876642100 000 00357999999999999999888877764 33224444332211
Q ss_pred CCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcch-------hhhhHHHHHHHHHHHhhccccCcE
Q 006372 74 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGL-------GNGLHSLQVQIAMRGISLLKVGGR 146 (648)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~-------~~~L~~lQ~~IL~~Al~lLk~GG~ 146 (648)
....+||.||..||=+...........-.+|.... ...-...+...|.+++++||+||+
T Consensus 325 --------------~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 390 (544)
T 3khk_A 325 --------------HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGS 390 (544)
T ss_dssp --------------CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEE
T ss_pred --------------cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCce
Confidence 11257999999999876422110000001121110 111122345689999999999999
Q ss_pred EEEecc--cCCcc-ccHHHHHHHHHhCC
Q 006372 147 IVYSTC--SMNPV-ENEAVVAEILRKCE 171 (648)
Q Consensus 147 LVYSTC--Sl~p~-ENEaVV~~~L~~~~ 171 (648)
+++-+= +++-. -.+.-+...|-+..
T Consensus 391 ~aiVlP~g~L~~~~~~~~~iRk~Lle~~ 418 (544)
T 3khk_A 391 MALLLANGSMSSNTNNEGEIRKTLVEQD 418 (544)
T ss_dssp EEEEEETHHHHCCGGGHHHHHHHHHHTT
T ss_pred EEEEecchhhhcCcchHHHHHHHHHhCC
Confidence 777653 33332 34666666665544
No 209
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=96.45 E-value=0.0061 Score=58.80 Aligned_cols=104 Identities=5% Similarity=-0.071 Sum_probs=68.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHH------------hCCCcEEEeecccccCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR------------MCTANLIVTNHEAQHFPGC 68 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkR------------lg~~nv~vtn~Da~~~p~~ 68 (648)
+.|+.|.-+..|++. ...|+++|.++.-+...+++.+. ....++.+...|+..++..
T Consensus 29 ~GCG~G~~~~~la~~-----------g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 29 PLCGKSQDMSWLSGQ-----------GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp TTTCCSHHHHHHHHH-----------CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred eCCCCcHhHHHHHHC-----------CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 368889888888774 24899999999988877665432 1235677777777664310
Q ss_pred ccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEE
Q 006372 69 RANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 148 (648)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LV 148 (648)
....||.|++-. ++- ... .....+.|.+..++|||||+++
T Consensus 98 --------------------~~~~fD~v~~~~------~l~-------~l~-------~~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 98 --------------------DIGHCAAFYDRA------AMI-------ALP-------ADMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp --------------------HHHSEEEEEEES------CGG-------GSC-------HHHHHHHHHHHHHHSCSEEEEE
T ss_pred --------------------cCCCEEEEEECc------chh-------hCC-------HHHHHHHHHHHHHHcCCCcEEE
Confidence 014699998622 111 001 1223567899999999999988
Q ss_pred EecccCC
Q 006372 149 YSTCSMN 155 (648)
Q Consensus 149 YSTCSl~ 155 (648)
+.|+...
T Consensus 138 l~~~~~~ 144 (203)
T 1pjz_A 138 LITLEYD 144 (203)
T ss_dssp EEEESSC
T ss_pred EEEEecC
Confidence 7777653
No 210
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=96.33 E-value=0.018 Score=58.45 Aligned_cols=107 Identities=16% Similarity=0.062 Sum_probs=61.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcC-ChHHHHHHHHHH-----HHhCCC-----cEEEeecccccCCCcc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQT-----KRMCTA-----NLIVTNHEAQHFPGCR 69 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~-d~kR~~~L~~~l-----kRlg~~-----nv~vtn~Da~~~p~~~ 69 (648)
++|+.|.-+..++.. +.+.|+++|. ++.-+..+++++ ++.+.. ++.+...+........
T Consensus 86 lG~G~G~~~~~~a~~----------~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 86 LGAGAGLVSIVAFLA----------GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTCTTSHHHHHHHHT----------TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred ecccccHHHHHHHHc----------CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 478889888766543 1358999999 899999999999 555442 5555543322110000
Q ss_pred cCCCCCCCCCcCcccccccccccccEEEE-cCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccc---c--
Q 006372 70 ANKNFSSASDKGIESESNMGQLLFDRVLC-DVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK---V-- 143 (648)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~FDrILl-DvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk---~-- 143 (648)
. .......||.|++ |+.. ++ . ....+|....++|+ |
T Consensus 156 -------------~--~~~~~~~fD~Ii~~dvl~--------~~--------~-------~~~~ll~~l~~~Lk~~~p~~ 197 (281)
T 3bzb_A 156 -------------Q--RCTGLQRFQVVLLADLLS--------FH--------Q-------AHDALLRSVKMLLALPANDP 197 (281)
T ss_dssp -------------H--HHHSCSSBSEEEEESCCS--------CG--------G-------GHHHHHHHHHHHBCCTTTCT
T ss_pred -------------H--hhccCCCCCEEEEeCccc--------Ch--------H-------HHHHHHHHHHHHhcccCCCC
Confidence 0 0001257999987 6641 00 0 13456778888899 9
Q ss_pred CcEEEEecccCC
Q 006372 144 GGRIVYSTCSMN 155 (648)
Q Consensus 144 GG~LVYSTCSl~ 155 (648)
||+++.+.+...
T Consensus 198 gG~l~v~~~~~~ 209 (281)
T 3bzb_A 198 TAVALVTFTHHR 209 (281)
T ss_dssp TCEEEEEECC--
T ss_pred CCEEEEEEEeee
Confidence 997655444433
No 211
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=96.27 E-value=0.017 Score=59.00 Aligned_cols=111 Identities=11% Similarity=0.065 Sum_probs=74.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh-------CCCcEEEeecccccCCCcccCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM-------CTANLIVTNHEAQHFPGCRANKN 73 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl-------g~~nv~vtn~Da~~~p~~~~~~~ 73 (648)
++|++|.-+..+++. +...|+++|+++.-+...+++.... +..++.+...|+..++... ..
T Consensus 41 lGcG~G~~~~~l~~~----------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--~~ 108 (313)
T 3bgv_A 41 LGCGKGGDLLKWKKG----------RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLID--KF 108 (313)
T ss_dssp ETCTTTTTHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTT--TC
T ss_pred ECCCCcHHHHHHHhc----------CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhh--hc
Confidence 478899988887662 2458999999999998888887765 3457888888877653100 00
Q ss_pred CCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 74 FSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
......||.|++-- + + .|...+ ..-...+|.++.++|||||+++.+|..
T Consensus 109 -------------~~~~~~fD~V~~~~------~------l--~~~~~~----~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 109 -------------RDPQMCFDICSCQF------V------C--HYSFES----YEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp -------------SSTTCCEEEEEEET------C------G--GGGGGS----HHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred -------------ccCCCCEEEEEEec------c------h--hhccCC----HHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 00114799999732 1 1 121001 122357899999999999999998765
Q ss_pred C
Q 006372 154 M 154 (648)
Q Consensus 154 l 154 (648)
.
T Consensus 158 ~ 158 (313)
T 3bgv_A 158 S 158 (313)
T ss_dssp H
T ss_pred h
Confidence 4
No 212
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=96.25 E-value=0.0059 Score=62.09 Aligned_cols=76 Identities=11% Similarity=-0.054 Sum_probs=57.0
Q ss_pred EEEEEEcCChHHHHHHHHHHHH----hCCCcEEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCC
Q 006372 28 GMVIANDLDVQRCNLLIHQTKR----MCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCS 103 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkR----lg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCS 103 (648)
+.|+++|+|+.-++..++++.+ +..+++.+...|+..++ ..||.|++|++
T Consensus 95 ~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~------------------------~~fD~Ii~d~~-- 148 (262)
T 2cmg_A 95 THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI------------------------KKYDLIFCLQE-- 148 (262)
T ss_dssp CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC------------------------CCEEEEEESSC--
T ss_pred CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH------------------------hhCCEEEECCC--
Confidence 6899999999888877766533 23467888888876642 35999999953
Q ss_pred CCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 104 GDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 104 GdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
+|.. .+..+.+.|+|||++|..+++.
T Consensus 149 -------dp~~------------------~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 149 -------PDIH------------------RIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp -------CCHH------------------HHHHHHTTEEEEEEEEEEEECT
T ss_pred -------ChHH------------------HHHHHHHhcCCCcEEEEEcCCc
Confidence 1210 6788999999999999987663
No 213
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=96.24 E-value=0.049 Score=56.67 Aligned_cols=100 Identities=14% Similarity=0.097 Sum_probs=72.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
++++.|.-+..+++.. +...++++|. +.-+...++++++.+.. ++.+...|.... +
T Consensus 190 vG~G~G~~~~~l~~~~---------~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~--------- 246 (360)
T 1tw3_A 190 VGGGKGGFAAAIARRA---------PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP----L--------- 246 (360)
T ss_dssp ETCTTSHHHHHHHHHC---------TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC----C---------
T ss_pred eCCcCcHHHHHHHHhC---------CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC----C---------
Confidence 3688999998887763 3468899999 88899999999888875 788888876431 0
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
...||.|++.-. ...|... ...++|.++.+.|||||+|+.+...
T Consensus 247 ----------~~~~D~v~~~~v-------------l~~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 247 ----------PRKADAIILSFV-------------LLNWPDH-------DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp ----------SSCEEEEEEESC-------------GGGSCHH-------HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ----------CCCccEEEEccc-------------ccCCCHH-------HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 023999987432 1223221 2267899999999999999987665
No 214
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.13 E-value=0.018 Score=57.13 Aligned_cols=106 Identities=15% Similarity=0.100 Sum_probs=69.4
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChH------HHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQ------RCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNF 74 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~k------R~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~ 74 (648)
+|+.|.-+.+++.... +.+.|+++|.++. -+...+++++..+. +++.+...| .+....+
T Consensus 51 GcG~G~~~~~l~~~~g--------~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~---- 116 (275)
T 3bkx_A 51 GCGQGDLSAVLADQVG--------SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT--NLSDDLG---- 116 (275)
T ss_dssp SCTTSHHHHHHHHHHC--------TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC--CTTTCCG----
T ss_pred CCCCCHHHHHHHHHhC--------CCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC--hhhhccC----
Confidence 6889999999888652 2478999999987 78888888887776 578888776 1110000
Q ss_pred CCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 75 SSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
......||.|++... +..-++ + ..++...-.++++||+++.++.+.
T Consensus 117 ------------~~~~~~fD~v~~~~~------l~~~~~------~----------~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 117 ------------PIADQHFDRVVLAHS------LWYFAS------A----------NALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp ------------GGTTCCCSEEEEESC------GGGSSC------H----------HHHHHHHHHHTTTCSEEEEEEECS
T ss_pred ------------CCCCCCEEEEEEccc------hhhCCC------H----------HHHHHHHHHHhCCCCEEEEEEecC
Confidence 011257999997543 111110 0 124555555667799999988776
Q ss_pred C
Q 006372 155 N 155 (648)
Q Consensus 155 ~ 155 (648)
.
T Consensus 163 ~ 163 (275)
T 3bkx_A 163 Q 163 (275)
T ss_dssp S
T ss_pred C
Confidence 4
No 215
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=96.11 E-value=0.046 Score=57.11 Aligned_cols=100 Identities=15% Similarity=0.104 Sum_probs=74.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++++|.-+..+++.. |...++++|. +.-+...++++++.+.++ +.+...|....|.
T Consensus 198 G~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------- 254 (359)
T 1x19_A 198 GGGIGDISAAMLKHF---------PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY------------- 254 (359)
T ss_dssp SCTTCHHHHHHHHHC---------TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC-------------
T ss_pred CCcccHHHHHHHHHC---------CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC-------------
Confidence 678899998888763 3568999999 999999999999888765 8888888655321
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
..+|.|++-- +...|.. ....++|.++.+.|||||+|+......
T Consensus 255 ----------~~~D~v~~~~-------------vlh~~~d-------~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 255 ----------PEADAVLFCR-------------ILYSANE-------QLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp ----------CCCSEEEEES-------------CGGGSCH-------HHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred ----------CCCCEEEEec-------------hhccCCH-------HHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 2249998832 2223432 234678999999999999998776554
No 216
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=96.10 E-value=0.016 Score=63.47 Aligned_cols=101 Identities=14% Similarity=0.039 Sum_probs=68.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHH-------HHHHHHhC--CCcEEEeecccccCCCcccC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLL-------IHQTKRMC--TANLIVTNHEAQHFPGCRAN 71 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L-------~~~lkRlg--~~nv~vtn~Da~~~p~~~~~ 71 (648)
++|++|.-+.+++.... .+.|+++|+++.-+... +.+++++| ..++.+...|+..-+. .+
T Consensus 249 LGCGsG~la~~LA~~~g---------~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~-~~- 317 (433)
T 1u2z_A 249 LGSGVGNCVVQAALECG---------CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNN-RV- 317 (433)
T ss_dssp ESCTTSHHHHHHHHHHC---------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCH-HH-
T ss_pred eCCCcCHHHHHHHHHCC---------CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccc-cc-
Confidence 36899999999988642 35899999999987777 78888888 5688887765432100 00
Q ss_pred CCCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEe
Q 006372 72 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYS 150 (648)
......||.|++...+ + .++ + ...|...++.|||||+||.+
T Consensus 318 ---------------~~~~~~FDvIvvn~~l-----~--~~d---------------~-~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 318 ---------------AELIPQCDVILVNNFL-----F--DED---------------L-NKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp ---------------HHHGGGCSEEEECCTT-----C--CHH---------------H-HHHHHHHHTTCCTTCEEEES
T ss_pred ---------------ccccCCCCEEEEeCcc-----c--ccc---------------H-HHHHHHHHHhCCCCeEEEEe
Confidence 0002469999975332 0 011 1 13467888999999999875
No 217
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=96.08 E-value=0.064 Score=56.42 Aligned_cols=105 Identities=12% Similarity=0.033 Sum_probs=72.9
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
.+++|.-+..+++.. |...+++.|. +.-+...+.++.+.+. .++.+..+|..... ..+
T Consensus 187 G~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~---------- 245 (363)
T 3dp7_A 187 GGNTGKWATQCVQYN---------KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRD-VPF---------- 245 (363)
T ss_dssp SCTTCHHHHHHHHHS---------TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSS-CCC----------
T ss_pred CCCcCHHHHHHHHhC---------CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccC-CCC----------
Confidence 578888888887763 3568999998 8888888887777775 47888888865420 000
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p 156 (648)
...||.|++-- +...|... -..++|.++.+.|||||+|+.....+..
T Consensus 246 ---------p~~~D~v~~~~-------------vlh~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 246 ---------PTGFDAVWMSQ-------------FLDCFSEE-------EVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp ---------CCCCSEEEEES-------------CSTTSCHH-------HHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred ---------CCCcCEEEEec-------------hhhhCCHH-------HHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 14699998722 22234322 2357899999999999999887665543
No 218
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=96.04 E-value=0.1 Score=53.77 Aligned_cols=101 Identities=13% Similarity=0.025 Sum_probs=72.8
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
.+++|.-+..+++.. |...+++.|. +.-+...++++...+. .++.+..+|... + .
T Consensus 177 G~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~---~---------- 232 (332)
T 3i53_A 177 GGGSGGLLSALLTAH---------EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-P---L---------- 232 (332)
T ss_dssp TCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C---C----------
T ss_pred CCChhHHHHHHHHHC---------CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-C---C----------
Confidence 478898888887763 3567889999 8888888888888886 578888877531 1 0
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
...||.|++=- ++..|.. ..+.++|.++.+.|+|||+|+-....+.
T Consensus 233 ---------p~~~D~v~~~~-------------vlh~~~~-------~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 233 ---------PAGAGGYVLSA-------------VLHDWDD-------LSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp ---------CCSCSEEEEES-------------CGGGSCH-------HHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred ---------CCCCcEEEEeh-------------hhccCCH-------HHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 02599999721 2334432 2357899999999999999988765543
No 219
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=96.03 E-value=0.047 Score=56.24 Aligned_cols=100 Identities=11% Similarity=0.057 Sum_probs=72.8
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++++|..+..+++.. |...+++.|. +.-+...++++.+.+. .++.+..+|... + .
T Consensus 175 G~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~---~---------- 230 (334)
T 2ip2_A 175 GGGSGELTKAILQAE---------PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-E---V---------- 230 (334)
T ss_dssp TCTTCHHHHHHHHHC---------TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-C---C----------
T ss_pred CCCchHHHHHHHHHC---------CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-C---C----------
Confidence 688999998887763 3568999999 8888888888877764 468888777543 1 0
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
...||.|++-- +...|... ...++|.++.+.|+|||+|+.....+
T Consensus 231 ---------~~~~D~v~~~~-------------vl~~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 231 ---------PSNGDIYLLSR-------------IIGDLDEA-------ASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp ---------CSSCSEEEEES-------------CGGGCCHH-------HHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred ---------CCCCCEEEEch-------------hccCCCHH-------HHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 13599999632 22344322 23688999999999999998886554
No 220
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=96.02 E-value=0.03 Score=54.67 Aligned_cols=118 Identities=13% Similarity=0.034 Sum_probs=73.1
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|+.|.-+..+++. ...|+++|.++.-+...+.+ +.+...|+..+..
T Consensus 49 GcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~-------------- 95 (240)
T 3dli_A 49 GCGRGEFLELCKEE-----------GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLK-------------- 95 (240)
T ss_dssp TCTTTHHHHHHHHH-----------TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHH--------------
T ss_pred eCCCCHHHHHHHhC-----------CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhh--------------
Confidence 67899988887764 13689999998877766544 4555566544310
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc-----
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP----- 156 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p----- 156 (648)
......||.|++- +++..-+ .. -...+|..+.++|||||+++.++.....
T Consensus 96 -----~~~~~~fD~i~~~------~~l~~~~-------~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 150 (240)
T 3dli_A 96 -----SLPDKYLDGVMIS------HFVEHLD-------PE-------RLFELLSLCYSKMKYSSYIVIESPNPTSLYSLI 150 (240)
T ss_dssp -----TSCTTCBSEEEEE------SCGGGSC-------GG-------GHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHH
T ss_pred -----hcCCCCeeEEEEC------CchhhCC-------cH-------HHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHH
Confidence 0112579999973 2221111 10 1256789999999999999998865321
Q ss_pred ----------cccHHHHHHHHHhCCCceEEEeC
Q 006372 157 ----------VENEAVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 157 ----------~ENEaVV~~~L~~~~g~veLvd~ 179 (648)
.=...-+..+|++.| |+++.+
T Consensus 151 ~~~~~~~~~~~~~~~~l~~~l~~aG--f~~~~~ 181 (240)
T 3dli_A 151 NFYIDPTHKKPVHPETLKFILEYLG--FRDVKI 181 (240)
T ss_dssp HHTTSTTCCSCCCHHHHHHHHHHHT--CEEEEE
T ss_pred HHhcCccccccCCHHHHHHHHHHCC--CeEEEE
Confidence 113355667777765 444443
No 221
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=96.00 E-value=0.013 Score=55.75 Aligned_cols=78 Identities=14% Similarity=0.098 Sum_probs=54.3
Q ss_pred EEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCCcc
Q 006372 29 MVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 108 (648)
Q Consensus 29 ~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtl 108 (648)
.|+++|.++..+...++++ +++.+...|+..+|. ....||.|++... +
T Consensus 58 ~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~~------l 105 (211)
T 2gs9_A 58 QKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPF---------------------PGESFDVVLLFTT------L 105 (211)
T ss_dssp EEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCS---------------------CSSCEEEEEEESC------T
T ss_pred eEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCC---------------------CCCcEEEEEEcCh------h
Confidence 7999999998877776554 566777777665431 1256999997532 1
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 109 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 109 rk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
..-++ ..++|..+.++|||||+++.++-.-
T Consensus 106 ~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 106 EFVED----------------VERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp TTCSC----------------HHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred hhcCC----------------HHHHHHHHHHHcCCCCEEEEEecCC
Confidence 11111 2467899999999999999988643
No 222
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=95.97 E-value=0.021 Score=55.01 Aligned_cols=93 Identities=15% Similarity=0.101 Sum_probs=62.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
.|++|.-+..+++. ...|+++|.++.-+...++++. . ++.+...|+..++
T Consensus 50 GcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~~~---~-~v~~~~~d~~~~~--------------- 99 (250)
T 2p7i_A 50 GSFKGDFTSRLQEH-----------FNDITCVEASEEAISHAQGRLK---D-GITYIHSRFEDAQ--------------- 99 (250)
T ss_dssp SCTTSHHHHHHTTT-----------CSCEEEEESCHHHHHHHHHHSC---S-CEEEEESCGGGCC---------------
T ss_pred CCCCCHHHHHHHHh-----------CCcEEEEeCCHHHHHHHHHhhh---C-CeEEEEccHHHcC---------------
Confidence 46778777766542 1269999999987776655432 2 6777777765531
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHh-hccccCcEEEEeccc
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGI-SLLKVGGRIVYSTCS 153 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al-~lLk~GG~LVYSTCS 153 (648)
....||.|++-- ++..-++ ...+|..+. ++|||||+|+.++..
T Consensus 100 -------~~~~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 100 -------LPRRYDNIVLTH------VLEHIDD----------------PVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp -------CSSCEEEEEEES------CGGGCSS----------------HHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred -------cCCcccEEEEhh------HHHhhcC----------------HHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 015699999742 2211111 136789999 999999999998854
No 223
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=95.97 E-value=0.029 Score=57.99 Aligned_cols=111 Identities=9% Similarity=0.056 Sum_probs=64.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC------cEEEeecccccCCCcccCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA------NLIVTNHEAQHFPGCRANKNF 74 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~------nv~vtn~Da~~~p~~~~~~~~ 74 (648)
+||+.|+-+..++. . ..+.|+++|++..-+...+++....+.. ++.....|... +....
T Consensus 55 lGCG~G~~l~~~~~---~-------~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~-d~~~~---- 119 (302)
T 2vdw_A 55 IDFGNGADLEKYFY---G-------EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRS-DTFVS---- 119 (302)
T ss_dssp TTCTTTTTHHHHHH---T-------TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTS-SSHHH----
T ss_pred EecCCcHhHHHHHh---c-------CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhccc-chhhh----
Confidence 46788876554433 1 1358999999999999888877766542 12233333211 00000
Q ss_pred CCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 75 SSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
..........||.|+|-- + ++.-|.... +..+|.++.++|||||+++.+|..
T Consensus 120 --------~l~~~~~~~~FD~V~~~~------~------lhy~~~~~~-------~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 120 --------SVREVFYFGKFNIIDWQF------A------IHYSFHPRH-------YATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp --------HHHTTCCSSCEEEEEEES------C------GGGTCSTTT-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --------hhhccccCCCeeEEEECc------h------HHHhCCHHH-------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 000001125799998632 1 111122221 257899999999999999999875
No 224
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=95.96 E-value=0.0092 Score=59.12 Aligned_cols=95 Identities=13% Similarity=0.142 Sum_probs=64.3
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|+.|.-+..++.. ...|+++|.++.-+...++++ +++.+...|+..++.
T Consensus 58 GcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~-------------- 107 (263)
T 3pfg_A 58 ACGTGMHLRHLADS-----------FGTVEGLELSADMLAIARRRN-----PDAVLHHGDMRDFSL-------------- 107 (263)
T ss_dssp TCTTSHHHHHHTTT-----------SSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTCCC--------------
T ss_pred CCcCCHHHHHHHHc-----------CCeEEEEECCHHHHHHHHhhC-----CCCEEEECChHHCCc--------------
Confidence 67888887777543 247999999998887776653 266777777766532
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
...||.|++... ++..-+ + ..-...+|.++.++|||||+||.++.
T Consensus 108 --------~~~fD~v~~~~~-----~l~~~~------~-------~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 108 --------GRRFSAVTCMFS-----SIGHLA------G-------QAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp --------SCCEEEEEECTT-----GGGGSC------H-------HHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred --------cCCcCEEEEcCc-----hhhhcC------C-------HHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 156999998421 111000 0 12345789999999999999998753
No 225
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=95.85 E-value=0.015 Score=58.21 Aligned_cols=94 Identities=18% Similarity=0.185 Sum_probs=65.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..+++ . .+.|+++|.++.-+...+.++ +++.+...|+..+|.
T Consensus 64 iGcG~G~~~~~l~~--~---------~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~------------- 114 (279)
T 3ccf_A 64 LGCGTGQLTEKIAQ--S---------GAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRV------------- 114 (279)
T ss_dssp ETCTTSHHHHHHHH--T---------TCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCC-------------
T ss_pred ecCCCCHHHHHHHh--C---------CCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCc-------------
Confidence 36889999988876 1 468999999998877776543 566667777665431
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
...||.|++... + .|-+. ...+|..+.++|||||+|+.++...
T Consensus 115 ---------~~~fD~v~~~~~------l--------~~~~d--------~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 115 ---------DKPLDAVFSNAM------L--------HWVKE--------PEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp ---------SSCEEEEEEESC------G--------GGCSC--------HHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ---------CCCcCEEEEcch------h--------hhCcC--------HHHHHHHHHHhcCCCcEEEEEecCC
Confidence 146999997432 1 11110 1367899999999999999987653
No 226
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=95.85 E-value=0.017 Score=56.81 Aligned_cols=90 Identities=18% Similarity=0.026 Sum_probs=56.2
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCC-----------------------------CcE-EEeecccccCCCcccCCCCCCC
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCT-----------------------------ANL-IVTNHEAQHFPGCRANKNFSSA 77 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~-----------------------------~nv-~vtn~Da~~~p~~~~~~~~~~~ 77 (648)
..|+++|.++.-+..++++++..+. .++ .+...|....+...
T Consensus 80 ~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~-------- 151 (265)
T 2i62_A 80 TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLG-------- 151 (265)
T ss_dssp EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTT--------
T ss_pred CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCC--------
Confidence 4899999999988888777654321 025 66777765532100
Q ss_pred CCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 78 SDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 78 ~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
......||.|++-- ++. .+..-..-...+|.++.++|||||+|+.++.
T Consensus 152 ---------~~~~~~fD~v~~~~------~l~------------~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 152 ---------GVSLPPADCLLSTL------CLD------------AACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp ---------TCCCCCEEEEEEES------CHH------------HHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ---------ccccCCccEEEEhh------hhh------------hhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 00115699999731 110 0000112356789999999999999999874
No 227
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=95.84 E-value=0.026 Score=57.58 Aligned_cols=111 Identities=14% Similarity=0.019 Sum_probs=66.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-|..+++. .+.|+|+|.|+.-+..++++++.. . .+.+...++.. ..
T Consensus 52 lGcGtG~~a~~La~~-----------g~~V~gvD~S~~ml~~Ar~~~~~~---~---v~~~~~~~~~~-~~--------- 104 (261)
T 3iv6_A 52 IGASTRFLIEKALER-----------GASVTVFDFSQRMCDDLAEALADR---C---VTIDLLDITAE-IP--------- 104 (261)
T ss_dssp ECTTCHHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHTSSS---C---CEEEECCTTSC-CC---------
T ss_pred EeCcchHHHHHHHhc-----------CCEEEEEECCHHHHHHHHHHHHhc---c---ceeeeeecccc-cc---------
Confidence 368999988888764 258999999999888887765433 1 12222222110 00
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
......||.|+++.. +..|. ..-....|.+..++| |||+|+.|..--.-.-+.
T Consensus 105 ------~~~~~~fD~Vv~~~~-------------l~~~~-------~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~ 157 (261)
T 3iv6_A 105 ------KELAGHFDFVLNDRL-------------INRFT-------TEEARRACLGMLSLV-GSGTVRASVKLGFYDIDL 157 (261)
T ss_dssp ------GGGTTCCSEEEEESC-------------GGGSC-------HHHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHH
T ss_pred ------cccCCCccEEEEhhh-------------hHhCC-------HHHHHHHHHHHHHhC-cCcEEEEEeccCcccccH
Confidence 001257999999753 11121 122456788888899 999999876532223334
Q ss_pred HHHHH
Q 006372 161 AVVAE 165 (648)
Q Consensus 161 aVV~~ 165 (648)
.++..
T Consensus 158 ~~l~~ 162 (261)
T 3iv6_A 158 KLIEY 162 (261)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 228
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=95.72 E-value=0.068 Score=57.37 Aligned_cols=87 Identities=8% Similarity=0.026 Sum_probs=60.1
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCC
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG 106 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdG 106 (648)
..|+++|+|+.-+...++|+++.|..+ +.+.+.|+..++. ...||.|++|||-. ..
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~----------------------~~~fD~Iv~NPPYG-~r 313 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT----------------------NKINGVLISNPPYG-ER 313 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC----------------------CCCSCEEEECCCCT-TT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc----------------------cCCcCEEEECCchh-hc
Confidence 569999999999999999999999874 8888888877531 13699999999941 11
Q ss_pred ccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 107 TLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 107 tlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
......+..+...| -+.++. -+||++..-|-
T Consensus 314 -------------l~~~~~l~~ly~~l-g~~lk~-~~g~~~~iit~ 344 (384)
T 3ldg_A 314 -------------LLDDKAVDILYNEM-GETFAP-LKTWSQFILTN 344 (384)
T ss_dssp -------------TSCHHHHHHHHHHH-HHHHTT-CTTSEEEEEES
T ss_pred -------------cCCHHHHHHHHHHH-HHHHhh-CCCcEEEEEEC
Confidence 11123345555544 334444 46887665544
No 229
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=95.69 E-value=0.024 Score=56.22 Aligned_cols=94 Identities=15% Similarity=0.079 Sum_probs=62.9
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-+..+++. ...|+++|.++.-+...+.+.. .+ +...|+..+|.
T Consensus 62 GcG~G~~~~~l~~~-----------~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~~-------------- 110 (260)
T 2avn_A 62 GGGTGKWSLFLQER-----------GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLPF-------------- 110 (260)
T ss_dssp TCTTCHHHHHHHTT-----------TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCCS--------------
T ss_pred CCCcCHHHHHHHHc-----------CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCCC--------------
Confidence 57888888877553 2479999999988877765532 23 44556554431
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++... + ..|.+. ...+|.++.++|||||+|+.++.+.
T Consensus 111 -------~~~~fD~v~~~~~------------~-~~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 111 -------PSGAFEAVLALGD------------V-LSYVEN--------KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp -------CTTCEEEEEECSS------------H-HHHCSC--------HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred -------CCCCEEEEEEcch------------h-hhcccc--------HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 1256999997432 0 011111 4567899999999999999988764
No 230
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=95.59 E-value=0.0084 Score=59.62 Aligned_cols=89 Identities=13% Similarity=0.143 Sum_probs=61.5
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
.|++|.-+.+++..+ +.+.|+++|.++..+...+++. +++.+...|+..+|.
T Consensus 93 G~G~G~~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~-------------- 144 (269)
T 1p91_A 93 GCGEGYYTHAFADAL---------PEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPF-------------- 144 (269)
T ss_dssp TCTTSTTHHHHHHTC---------TTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSB--------------
T ss_pred CCCCCHHHHHHHHhC---------CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCC--------------
Confidence 467788888887753 2358999999999888776542 455666667655431
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++--. + ..|..+.++|||||+|+.++-..
T Consensus 145 -------~~~~fD~v~~~~~----------~-------------------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 145 -------SDTSMDAIIRIYA----------P-------------------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp -------CTTCEEEEEEESC----------C-------------------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred -------CCCceeEEEEeCC----------h-------------------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 1146999996211 1 12677889999999999987554
No 231
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=95.58 E-value=0.012 Score=63.98 Aligned_cols=94 Identities=13% Similarity=0.042 Sum_probs=62.9
Q ss_pred chHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCccc
Q 006372 5 PGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIES 84 (648)
Q Consensus 5 PGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~ 84 (648)
.||-+..++.... |.+.|+++|+++... ...+++.+...|+..+|....
T Consensus 233 TGG~Sl~la~~~f--------P~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~-------------- 281 (419)
T 3sso_A 233 WGGGSLRMWKSFF--------PRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDR-------------- 281 (419)
T ss_dssp CCCHHHHHHHHHC--------TTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHH--------------
T ss_pred CCHHHHHHHHHhC--------CCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhh--------------
Confidence 5777887776542 468999999999851 245688888888876432100
Q ss_pred ccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 85 ESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 85 ~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
.......||.|++|.. . .| .-|.+.|..+.++|||||++|.+...
T Consensus 282 -l~~~d~sFDlVisdgs-----H------~~------------~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 282 -IARRYGPFDIVIDDGS-----H------IN------------AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp -HHHHHCCEEEEEECSC-----C------CH------------HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred -hhcccCCccEEEECCc-----c------cc------------hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 0000257999998742 1 01 12456789999999999999987543
No 232
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=95.52 E-value=0.033 Score=60.84 Aligned_cols=100 Identities=12% Similarity=0.015 Sum_probs=67.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHH-------HHhCC--CcEEEeecccccCCCcccC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQT-------KRMCT--ANLIVTNHEAQHFPGCRAN 71 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~l-------kRlg~--~nv~vtn~Da~~~p~~~~~ 71 (648)
+||+.|.-+.+++... +.+.|+++|+++.-+.+.+.++ +.+|. .++.+.+.|+..+|..
T Consensus 180 LGCGtG~l~l~lA~~~---------g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~--- 247 (438)
T 3uwp_A 180 LGSGVGQVVLQVAAAT---------NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWR--- 247 (438)
T ss_dssp ESCTTSHHHHHHHHHC---------CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHH---
T ss_pred eCCCCCHHHHHHHHHC---------CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccc---
Confidence 4899999999887652 2347999999987776666544 44564 6899999987664310
Q ss_pred CCCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 72 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
.....||.|++-.+|= .|+. ...|...++.|||||+||-+-
T Consensus 248 ----------------d~~~~aDVVf~Nn~~F-------~pdl----------------~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 248 ----------------ERIANTSVIFVNNFAF-------GPEV----------------DHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp ----------------HHHHTCSEEEECCTTC-------CHHH----------------HHHHHHHHTTSCTTCEEEESS
T ss_pred ----------------cccCCccEEEEccccc-------CchH----------------HHHHHHHHHcCCCCcEEEEee
Confidence 0013689999866530 1111 223456678999999999653
No 233
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=95.49 E-value=0.011 Score=69.04 Aligned_cols=154 Identities=12% Similarity=-0.032 Sum_probs=85.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHH--HHHHHH----hCCCcEEEeecccccCCCcccCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLL--IHQTKR----MCTANLIVTNHEAQHFPGCRANKNF 74 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L--~~~lkR----lg~~nv~vtn~Da~~~p~~~~~~~~ 74 (648)
.||+.|+....++..+... ....|+++|+++.-+.+. +.++.. .+..+..+...|.....
T Consensus 328 PaCGSG~FLIaaA~~l~ei------~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~-------- 393 (878)
T 3s1s_A 328 PAAGSGNLLATVSAGFNNV------MPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLN-------- 393 (878)
T ss_dssp TTCTTSHHHHHHHHTSTTC------CGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCC--------
T ss_pred CCCCccHHHHHHHHHhccc------CCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccc--------
Confidence 4899999999887765321 135789999999988887 433332 12223233333322210
Q ss_pred CCCCCcCcccccccccccccEEEEcCCCCCCCccccC-ccccccc------CcchhhhhHHHHHHHHHHHhhccccCcEE
Q 006372 75 SSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKA-PDIWRKW------NVGLGNGLHSLQVQIAMRGISLLKVGGRI 147 (648)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~-p~i~~kw------s~~~~~~L~~lQ~~IL~~Al~lLk~GG~L 147 (648)
.....+||.|++.||=++....... .+...++ .+........+...++.+|+++|++||++
T Consensus 394 ------------~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrL 461 (878)
T 3s1s_A 394 ------------PEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVI 461 (878)
T ss_dssp ------------GGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEE
T ss_pred ------------ccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEE
Confidence 0112579999999997654322110 0000000 00111112346778999999999999998
Q ss_pred EEeccc-CC--ccccHHHHHHHHHhCCCceEEEeCC
Q 006372 148 VYSTCS-MN--PVENEAVVAEILRKCEGSVELVDVS 180 (648)
Q Consensus 148 VYSTCS-l~--p~ENEaVV~~~L~~~~g~veLvd~s 180 (648)
++-+=. +. ....+.-+...|-+...-..+++..
T Consensus 462 AfIlP~s~Lf~sg~~~kkLRk~LLe~~~I~aIIdLP 497 (878)
T 3s1s_A 462 SAIMPKQYLTAQGNESKAFREFLVGNFGLEHIFLYP 497 (878)
T ss_dssp EEEEETHHHHCCSHHHHHHHHHHTTTTCEEEEEECC
T ss_pred EEEEChHHhccCChHHHHHHHHHHhCCCeEEEEECC
Confidence 886543 21 1222455666655444334555543
No 234
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=95.43 E-value=0.034 Score=55.92 Aligned_cols=102 Identities=11% Similarity=0.016 Sum_probs=64.4
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHH-----------------hCCCcEEEeeccccc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR-----------------MCTANLIVTNHEAQH 64 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkR-----------------lg~~nv~vtn~Da~~ 64 (648)
.|+.|.-+..|++. ...|+++|.++.-+...+++... -...++.+...|+..
T Consensus 76 GCG~G~~~~~La~~-----------G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 76 LCGKAIEMKWFADR-----------GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp TCTTCTHHHHHHHT-----------TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCcHHHHHHHHC-----------CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 46788887777663 23799999999887766543210 012567888888766
Q ss_pred CCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccC
Q 006372 65 FPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVG 144 (648)
Q Consensus 65 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~G 144 (648)
++.. ....||.|++=. ++-.-| + ..+..++.+..++||||
T Consensus 145 l~~~--------------------~~~~FD~V~~~~------~l~~l~-------~-------~~~~~~l~~~~~~LkpG 184 (252)
T 2gb4_A 145 LPRA--------------------NIGKFDRIWDRG------ALVAIN-------P-------GDHDRYADIILSLLRKE 184 (252)
T ss_dssp GGGG--------------------CCCCEEEEEESS------STTTSC-------G-------GGHHHHHHHHHHTEEEE
T ss_pred CCcc--------------------cCCCEEEEEEhh------hhhhCC-------H-------HHHHHHHHHHHHHcCCC
Confidence 4310 014699998521 111001 0 11346788999999999
Q ss_pred cEEEEecccC
Q 006372 145 GRIVYSTCSM 154 (648)
Q Consensus 145 G~LVYSTCSl 154 (648)
|+++..|...
T Consensus 185 G~l~l~~~~~ 194 (252)
T 2gb4_A 185 FQYLVAVLSY 194 (252)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEEEec
Confidence 9998776553
No 235
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=95.43 E-value=0.081 Score=56.88 Aligned_cols=87 Identities=10% Similarity=0.105 Sum_probs=59.4
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCC
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG 106 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdG 106 (648)
..|+++|+|+.-+...+.|+++.|..+ +.+.+.|+..++. ...||.|++|||- |
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~----------------------~~~fD~Iv~NPPY---g 318 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT----------------------EDEYGVVVANPPY---G 318 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC----------------------CCCSCEEEECCCC---C
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC----------------------CCCCCEEEECCCC---c
Confidence 569999999999999999999999864 8888888876531 1369999999993 1
Q ss_pred ccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 107 TLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 107 tlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
. + ......+..+-..| -+.++- -+||+++.-|-
T Consensus 319 ~---------r--l~~~~~l~~ly~~l-g~~lk~-~~g~~~~iit~ 351 (393)
T 3k0b_A 319 E---------R--LEDEEAVRQLYREM-GIVYKR-MPTWSVYVLTS 351 (393)
T ss_dssp C---------S--HHHHHHHHHHHHHH-HHHHHT-CTTCEEEEEEC
T ss_pred c---------c--cCCchhHHHHHHHH-HHHHhc-CCCCEEEEEEC
Confidence 1 0 11223345554444 333443 35787766554
No 236
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=95.41 E-value=0.069 Score=55.39 Aligned_cols=105 Identities=14% Similarity=0.059 Sum_probs=74.9
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
.+++|.-+..+++.. |...++++|. +.-+...++++.+.+.. ++.+..+|....+..
T Consensus 187 G~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------------ 244 (352)
T 3mcz_A 187 AGGHGTYLAQVLRRH---------PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF------------ 244 (352)
T ss_dssp TCTTCHHHHHHHHHC---------TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG------------
T ss_pred CCCcCHHHHHHHHhC---------CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc------------
Confidence 578898888887753 4568899999 77888888888888874 588888886543210
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p 156 (648)
....||.|++-- ++..|... ...++|.++.+.|||||+|+.....+..
T Consensus 245 --------~~~~~D~v~~~~-------------vlh~~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 245 --------EGGAADVVMLND-------------CLHYFDAR-------EAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp --------TTCCEEEEEEES-------------CGGGSCHH-------HHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred --------CCCCccEEEEec-------------ccccCCHH-------HHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 014599999821 23344332 2467899999999999999887765543
No 237
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=95.35 E-value=0.056 Score=52.73 Aligned_cols=116 Identities=12% Similarity=0.037 Sum_probs=73.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-+..++... ..|+++|.++.-+...++++ ...++.+...|+..++...
T Consensus 63 ~GcG~G~~~~~la~~~-----------~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~----------- 117 (245)
T 3ggd_A 63 FACGNGTQTKFLSQFF-----------PRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAA----------- 117 (245)
T ss_dssp ETCTTSHHHHHHHHHS-----------SCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHH-----------
T ss_pred EcCCCCHHHHHHHHhC-----------CCEEEEECCHHHHHHHHHhC---cccCceEEECccccccccc-----------
Confidence 3678999999887752 26999999998777666543 4457888888876543110
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccH
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENE 160 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENE 160 (648)
.......||.|++.....- ..+. -...+|.++.++|||||+|+.+..+.. +.
T Consensus 118 -----~~~~~~~~d~v~~~~~~~~-------------~~~~-------~~~~~l~~~~~~LkpgG~l~i~~~~~~---~~ 169 (245)
T 3ggd_A 118 -----QIHSEIGDANIYMRTGFHH-------------IPVE-------KRELLGQSLRILLGKQGAMYLIELGTG---CI 169 (245)
T ss_dssp -----HHHHHHCSCEEEEESSSTT-------------SCGG-------GHHHHHHHHHHHHTTTCEEEEEEECTT---HH
T ss_pred -----ccccccCccEEEEcchhhc-------------CCHH-------HHHHHHHHHHHHcCCCCEEEEEeCCcc---cc
Confidence 0000124899998753211 0111 125678999999999999888877642 33
Q ss_pred HHHHHHHHh
Q 006372 161 AVVAEILRK 169 (648)
Q Consensus 161 aVV~~~L~~ 169 (648)
..+..+...
T Consensus 170 ~~~~~~~~~ 178 (245)
T 3ggd_A 170 DFFNSLLEK 178 (245)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 444444443
No 238
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=95.34 E-value=0.016 Score=59.12 Aligned_cols=113 Identities=11% Similarity=-0.022 Sum_probs=74.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhC--------C-CcEEEeecccccCCCcccC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC--------T-ANLIVTNHEAQHFPGCRAN 71 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg--------~-~nv~vtn~Da~~~p~~~~~ 71 (648)
++|+.|.-+..++.. .+.|+++|.++..+.++++++++.. . .++.+.+.|+..+....
T Consensus 95 l~~G~G~dal~lA~~-----------g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~-- 161 (258)
T 2oyr_A 95 ATAGLGRDAFVLASV-----------GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI-- 161 (258)
T ss_dssp TTCTTCHHHHHHHHH-----------TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC--
T ss_pred cCCcCCHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC--
Confidence 478999999999875 2479999999999999999988753 3 46889999887652100
Q ss_pred CCCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 72 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
...||.|++|||=-. .... ..+...++.|++.+ .
T Consensus 162 ------------------~~~fDvV~lDP~y~~--------------~~~s---------aavkk~~~~lr~l~-----~ 195 (258)
T 2oyr_A 162 ------------------TPRPQVVYLDPMFPH--------------KQKS---------ALVKKEMRVFQSLV-----G 195 (258)
T ss_dssp ------------------SSCCSEEEECCCCCC--------------CCC--------------HHHHHHHHHS-----C
T ss_pred ------------------cccCCEEEEcCCCCC--------------cccc---------hHHHHHHHHHHHhh-----c
Confidence 125999999998311 0000 12333444444433 2
Q ss_pred ccCCccccHHHHHHHHHhCCCceE
Q 006372 152 CSMNPVENEAVVAEILRKCEGSVE 175 (648)
Q Consensus 152 CSl~p~ENEaVV~~~L~~~~g~ve 175 (648)
| ..+-+++++.+++.....|.
T Consensus 196 ~---~~~~~~ll~~a~~~a~~rvv 216 (258)
T 2oyr_A 196 P---DLDADGLLEPARLLATKRVV 216 (258)
T ss_dssp C---CTTGGGGHHHHHHHCSSEEE
T ss_pred C---CccHHHHHHHHHHhcCCeEE
Confidence 3 34778889999887654443
No 239
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=95.34 E-value=0.3 Score=51.36 Aligned_cols=102 Identities=12% Similarity=0.007 Sum_probs=73.8
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
.+++|.-+..+++.. |...+++.|. +.-+...+.++...+. .++.+..+|... + +
T Consensus 210 G~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~---~---------- 265 (369)
T 3gwz_A 210 GGGRGSLMAAVLDAF---------PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-T---I---------- 265 (369)
T ss_dssp TCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-C---C----------
T ss_pred CCCccHHHHHHHHHC---------CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-C---C----------
Confidence 578888888887762 3568899999 8888988888888885 568888877541 1 0
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p 156 (648)
...||.|++-- +...|.. ....++|.++.+.|||||+|+.....+..
T Consensus 266 ---------p~~~D~v~~~~-------------vlh~~~d-------~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 266 ---------PDGADVYLIKH-------------VLHDWDD-------DDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp ---------CSSCSEEEEES-------------CGGGSCH-------HHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred ---------CCCceEEEhhh-------------hhccCCH-------HHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 12599998732 2233432 22358999999999999999987766544
No 240
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=95.19 E-value=0.14 Score=54.74 Aligned_cols=78 Identities=13% Similarity=0.156 Sum_probs=59.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCC------------------------------CCCCEEEEEEcCChHHHHHHHHHHHHh
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPG------------------------------ALPNGMVIANDLDVQRCNLLIHQTKRM 50 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~------------------------------~~~~G~ViAnD~d~kR~~~L~~~lkRl 50 (648)
.||++|+.+..++.+..+.. ++ ..+...|+++|+|+.-+...+.|+++.
T Consensus 202 p~CGSGt~lieaa~~~~~~a-pg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~ 280 (385)
T 3ldu_A 202 PMCGSGTILIEAAMIGINMA-PGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIA 280 (385)
T ss_dssp TTCTTCHHHHHHHHHHTTCC-TTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHhhhC-CCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHc
Confidence 37899999888877654310 00 012357999999999999999999999
Q ss_pred CCC-cEEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCC
Q 006372 51 CTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVP 101 (648)
Q Consensus 51 g~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvP 101 (648)
|.. ++.+.+.|+..++. ...||.|++|||
T Consensus 281 gl~~~i~~~~~D~~~l~~----------------------~~~~D~Iv~NPP 310 (385)
T 3ldu_A 281 GVDEYIEFNVGDATQFKS----------------------EDEFGFIITNPP 310 (385)
T ss_dssp TCGGGEEEEECCGGGCCC----------------------SCBSCEEEECCC
T ss_pred CCCCceEEEECChhhcCc----------------------CCCCcEEEECCC
Confidence 986 68888888876531 146999999999
No 241
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=95.14 E-value=0.066 Score=53.50 Aligned_cols=22 Identities=32% Similarity=0.315 Sum_probs=19.8
Q ss_pred HHHHHHHhhccccCcEEEEecc
Q 006372 131 VQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 131 ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
..+|.+..++|||||++|.++.
T Consensus 177 ~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 177 RAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEe
Confidence 5689999999999999999974
No 242
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=94.90 E-value=0.027 Score=55.49 Aligned_cols=97 Identities=10% Similarity=-0.013 Sum_probs=63.2
Q ss_pred ccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 3 AAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 3 AAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
|+.|.-+..++.. .|...|+|.|+|..-++..++++.++|.. ++.+ .|....
T Consensus 58 CG~GplAl~l~~~---------~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~---------------- 110 (200)
T 3fzg_A 58 CGFNPLALYQWNE---------NEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD---------------- 110 (200)
T ss_dssp CTTHHHHHHHHCS---------SCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH----------------
T ss_pred CCCCHHHHHHHhc---------CCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc----------------
Confidence 4556655544322 24569999999999999999999999998 6766 232110
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEE-EecccC
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV-YSTCSM 154 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LV-YSTCSl 154 (648)
.....||.||+= ++..|-.-|...+.+.+++|+|||.+| +=|-|+
T Consensus 111 ------~~~~~~DvVLa~----------------------k~LHlL~~~~~al~~v~~~L~pggvfISfptksl 156 (200)
T 3fzg_A 111 ------VYKGTYDVVFLL----------------------KMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSL 156 (200)
T ss_dssp ------HTTSEEEEEEEE----------------------TCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCC
T ss_pred ------CCCCCcChhhHh----------------------hHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHh
Confidence 112569999971 111222444456669999999988766 333444
No 243
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=94.89 E-value=0.082 Score=53.48 Aligned_cols=110 Identities=10% Similarity=0.051 Sum_probs=65.5
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEE--EEEcCChHHHHHHHHHHHHh-CCCcEEEe--ecccccCCCcccCCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMV--IANDLDVQRCNLLIHQTKRM-CTANLIVT--NHEAQHFPGCRANKNFSS 76 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~V--iAnD~d~kR~~~L~~~lkRl-g~~nv~vt--n~Da~~~p~~~~~~~~~~ 76 (648)
.|++|.-|.+++..+... .+...| +++|.+..-+...++++.+. +.+++.+. ..++..++....
T Consensus 60 G~GtG~~~~~~l~~l~~~-----~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~------ 128 (292)
T 2aot_A 60 GGGAGEIDLQILSKVQAQ-----YPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRML------ 128 (292)
T ss_dssp TCTTSHHHHHHHHHHHHH-----STTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHH------
T ss_pred cCCCCHHHHHHHHHHHhh-----CCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhc------
Confidence 578998887777655421 123444 99999999888888777654 45565543 223222110000
Q ss_pred CCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 77 ASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 77 ~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
.......||.|++=-- +. |-++ ..+.|.+..++|||||+++.++.+
T Consensus 129 ---------~~~~~~~fD~V~~~~~------l~--------~~~d--------~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 129 ---------EKKELQKWDFIHMIQM------LY--------YVKD--------IPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp ---------TTTCCCCEEEEEEESC------GG--------GCSC--------HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ---------cccCCCceeEEEEeee------ee--------ecCC--------HHHHHHHHHHHcCCCcEEEEEEec
Confidence 0001256999987321 11 1110 134688899999999999998654
No 244
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=94.82 E-value=0.009 Score=62.07 Aligned_cols=91 Identities=18% Similarity=0.088 Sum_probs=55.9
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEe-ecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVT-NHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vt-n~Da~~~p~~~~~~~~~~~~~~ 80 (648)
.|++|+.|..|++. +.+.|+|+|+++.-+.. .+++ -+.+... ..+...++..
T Consensus 93 GcGTG~~t~~L~~~----------ga~~V~aVDvs~~mL~~---a~r~--~~rv~~~~~~ni~~l~~~------------ 145 (291)
T 3hp7_A 93 GASTGGFTDVMLQN----------GAKLVYAVDVGTNQLVW---KLRQ--DDRVRSMEQYNFRYAEPV------------ 145 (291)
T ss_dssp TCTTSHHHHHHHHT----------TCSEEEEECSSSSCSCH---HHHT--CTTEEEECSCCGGGCCGG------------
T ss_pred CCCccHHHHHHHhC----------CCCEEEEEECCHHHHHH---HHHh--CcccceecccCceecchh------------
Confidence 68999999888764 24689999999864432 2221 1233222 1222222110
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEe
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYS 150 (648)
......||.|.+|+.... | ..+|....++|||||++|..
T Consensus 146 ------~l~~~~fD~v~~d~sf~s---------------------l----~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 146 ------DFTEGLPSFASIDVSFIS---------------------L----NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp ------GCTTCCCSEEEECCSSSC---------------------G----GGTHHHHHHHSCTTCEEEEE
T ss_pred ------hCCCCCCCEEEEEeeHhh---------------------H----HHHHHHHHHHcCcCCEEEEE
Confidence 001134999999985321 0 34688899999999999987
No 245
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.81 E-value=0.091 Score=61.85 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=71.8
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh------CCCcEEEeecccccCCCcccCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM------CTANLIVTNHEAQHFPGCRANKNFS 75 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl------g~~nv~vtn~Da~~~p~~~~~~~~~ 75 (648)
++++|.-+..|+... .+.+.|+++|+++.-+...+++++.. +.+++.+...|+..++.
T Consensus 729 GCGTG~lai~LAr~g--------~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~-------- 792 (950)
T 3htx_A 729 GCGSGSLLDSLLDYP--------TSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS-------- 792 (950)
T ss_dssp TCSSSHHHHHHTSSC--------CCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT--------
T ss_pred CCCCCHHHHHHHHhC--------CCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc--------
Confidence 578888777765431 02368999999999999888877643 56789999998877542
Q ss_pred CCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 76 SASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 76 ~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
....||.|++- +++..-++ .....++..+.++|||| .|+.+|...
T Consensus 793 -------------~d~sFDlVV~~------eVLeHL~d--------------p~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 793 -------------RLHDVDIGTCL------EVIEHMEE--------------DQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp -------------TSCSCCEEEEE------SCGGGSCH--------------HHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred -------------ccCCeeEEEEe------CchhhCCh--------------HHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 12569999993 22211111 12346789999999998 888888753
No 246
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=94.68 E-value=0.033 Score=55.39 Aligned_cols=91 Identities=13% Similarity=0.079 Sum_probs=61.2
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|.-+..+++ +.+.|+++|+++.-+...+.+ .++.+...|+..+|.
T Consensus 42 GcG~G~~~~~l~~-----------~~~~v~gvD~s~~~~~~a~~~------~~~~~~~~d~~~~~~-------------- 90 (261)
T 3ege_A 42 GAGTGGYSVALAN-----------QGLFVYAVEPSIVMRQQAVVH------PQVEWFTGYAENLAL-------------- 90 (261)
T ss_dssp TCTTSHHHHHHHT-----------TTCEEEEECSCHHHHHSSCCC------TTEEEECCCTTSCCS--------------
T ss_pred cCcccHHHHHHHh-----------CCCEEEEEeCCHHHHHHHHhc------cCCEEEECchhhCCC--------------
Confidence 6788988888765 146899999998544432221 178888888766541
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
....||.|++-.. +..-++ ...+|.++.+.|| ||+++..++.
T Consensus 91 -------~~~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 91 -------PDKSVDGVISILA------IHHFSH----------------LEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp -------CTTCBSEEEEESC------GGGCSS----------------HHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred -------CCCCEeEEEEcch------HhhccC----------------HHHHHHHHHHHhC-CcEEEEEEcC
Confidence 1257999998532 110011 2467899999999 9998888875
No 247
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=94.66 E-value=0.078 Score=53.39 Aligned_cols=48 Identities=19% Similarity=0.149 Sum_probs=32.7
Q ss_pred HHHHHHHHhhccccCcEEEEecccC------------CccccHHHHHHHHHhCCCceEEEeC
Q 006372 130 QVQIAMRGISLLKVGGRIVYSTCSM------------NPVENEAVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 130 Q~~IL~~Al~lLk~GG~LVYSTCSl------------~p~ENEaVV~~~L~~~~g~veLvd~ 179 (648)
...+|.++.++|||||+|+.+...- ..--+++-+..+|++.| |+++.+
T Consensus 194 ~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG--f~~~~~ 253 (289)
T 2g72_A 194 FQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSG--YKVRDL 253 (289)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTT--EEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcC--CeEEEe
Confidence 4568999999999999999874211 01124566777888775 555554
No 248
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=94.59 E-value=0.019 Score=58.09 Aligned_cols=95 Identities=14% Similarity=0.059 Sum_probs=62.3
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
.|++|.-|..|++. ...|+|+|.++.-+... + ..+++.+...++..+|.
T Consensus 47 GcGtG~~~~~l~~~-----------~~~v~gvD~s~~ml~~a----~--~~~~v~~~~~~~e~~~~-------------- 95 (257)
T 4hg2_A 47 GCGSGQASLGLAEF-----------FERVHAVDPGEAQIRQA----L--RHPRVTYAVAPAEDTGL-------------- 95 (257)
T ss_dssp SCTTTTTHHHHHTT-----------CSEEEEEESCHHHHHTC----C--CCTTEEEEECCTTCCCC--------------
T ss_pred cCCCCHHHHHHHHh-----------CCEEEEEeCcHHhhhhh----h--hcCCceeehhhhhhhcc--------------
Confidence 46788777776543 24799999998643322 1 23678888888776542
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCcc
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPV 157 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ 157 (648)
....||.|++-- ++ .|-. . .+.|..+.+.|||||+|+..+.+....
T Consensus 96 -------~~~sfD~v~~~~------~~--------h~~~-----~----~~~~~e~~rvLkpgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 96 -------PPASVDVAIAAQ------AM--------HWFD-----L----DRFWAELRRVARPGAVFAAVTYGLTRV 141 (257)
T ss_dssp -------CSSCEEEEEECS------CC--------TTCC-----H----HHHHHHHHHHEEEEEEEEEEEECCCBC
T ss_pred -------cCCcccEEEEee------eh--------hHhh-----H----HHHHHHHHHHcCCCCEEEEEECCCCCC
Confidence 125799999721 11 2221 0 135788899999999999888776543
No 249
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=94.58 E-value=0.063 Score=51.26 Aligned_cols=45 Identities=18% Similarity=0.204 Sum_probs=34.0
Q ss_pred HHHHHHHhhccccCcEEEEecccCCccccHHHHHHHHHhCCCceEEEe
Q 006372 131 VQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVD 178 (648)
Q Consensus 131 ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENEaVV~~~L~~~~g~veLvd 178 (648)
..+|..+.++|+|||+++.+++... ..+..-+..+|++.| ++++.
T Consensus 131 ~~~l~~~~~~L~~gG~l~i~~~~~~-~~~~~~~~~~l~~~G--f~~~~ 175 (215)
T 2zfu_A 131 RDFLEEANRVLKPGGLLKVAEVSSR-FEDVRTFLRAVTKLG--FKIVS 175 (215)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECGGG-CSCHHHHHHHHHHTT--EEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEEcCCC-CCCHHHHHHHHHHCC--CEEEE
Confidence 4678889999999999999876542 236677888888876 55554
No 250
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=94.53 E-value=0.014 Score=59.14 Aligned_cols=73 Identities=18% Similarity=0.006 Sum_probs=54.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCCh-------HHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDV-------QRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANK 72 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~-------kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~ 72 (648)
+||+.|.-|..++.. .+.|+++|+++ .-++..+++++..+..+ +.+.+.|+..+... +
T Consensus 90 lgcG~G~~a~~lA~~-----------g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~-~-- 155 (258)
T 2r6z_A 90 ATAGLGRDSFVLASL-----------GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPA-L-- 155 (258)
T ss_dssp TTCTTCHHHHHHHHT-----------TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHH-H--
T ss_pred eeCccCHHHHHHHHh-----------CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHh-h--
Confidence 589999999988773 25799999999 88888888887777755 88998887654110 0
Q ss_pred CCCCCCCcCcccccccccccccEEEEcCC
Q 006372 73 NFSSASDKGIESESNMGQLLFDRVLCDVP 101 (648)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~FDrILlDvP 101 (648)
......||.|++|||
T Consensus 156 --------------~~~~~~fD~V~~dP~ 170 (258)
T 2r6z_A 156 --------------VKTQGKPDIVYLDPM 170 (258)
T ss_dssp --------------HHHHCCCSEEEECCC
T ss_pred --------------hccCCCccEEEECCC
Confidence 000046999999987
No 251
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=94.49 E-value=0.13 Score=49.45 Aligned_cols=74 Identities=16% Similarity=0.196 Sum_probs=50.2
Q ss_pred EEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCCcccc
Q 006372 31 IANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRK 110 (648)
Q Consensus 31 iAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk 110 (648)
+++|.++.-+...+.+ ++.+...|+..++. ....||.|++... +..
T Consensus 69 ~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~---------------------~~~~fD~v~~~~~------l~~ 114 (219)
T 1vlm_A 69 IGVEPSERMAEIARKR-------GVFVLKGTAENLPL---------------------KDESFDFALMVTT------ICF 114 (219)
T ss_dssp EEEESCHHHHHHHHHT-------TCEEEECBTTBCCS---------------------CTTCEEEEEEESC------GGG
T ss_pred hccCCCHHHHHHHHhc-------CCEEEEcccccCCC---------------------CCCCeeEEEEcch------Hhh
Confidence 8999999887776654 45666666655431 1246999998532 211
Q ss_pred CcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 111 APDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 111 ~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
-++ ...+|..+.++|+|||+++.++...
T Consensus 115 ~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 115 VDD----------------PERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp SSC----------------HHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ccC----------------HHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 111 1467899999999999999987654
No 252
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=94.34 E-value=0.2 Score=55.97 Aligned_cols=145 Identities=14% Similarity=0.091 Sum_probs=83.7
Q ss_pred cccchHHHHHHHHHHhcCCCCC----CCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPG----ALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSA 77 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~----~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~ 77 (648)
||+.||...++++.+....... ......+++.|+++.=..+.+-++--.|.....+...|+..+|...
T Consensus 225 acGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~-------- 296 (530)
T 3ufb_A 225 ACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLRE-------- 296 (530)
T ss_dssp TCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGG--------
T ss_pred CCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhh--------
Confidence 8999999999988876532100 0012468999999887777777776666654445566654433211
Q ss_pred CCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccc-------cCcEEEEe
Q 006372 78 SDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK-------VGGRIVYS 150 (648)
Q Consensus 78 ~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk-------~GG~LVYS 150 (648)
.....+||.||..||=++..- .+.+.++.. .......+...+.+.+.+|| +||++.+-
T Consensus 297 ---------~~~~~~fD~Il~NPPf~~~~~----~~~~~~~~~--~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avV 361 (530)
T 3ufb_A 297 ---------MGDKDRVDVILTNPPFGGEEE----KGILGNFPE--DMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVV 361 (530)
T ss_dssp ---------CCGGGCBSEEEECCCSSCBCC----HHHHTTSCG--GGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEE
T ss_pred ---------hcccccceEEEecCCCCcccc----ccccccCch--hcccchhHHHHHHHHHHHhhhhhhccCCCceEEEE
Confidence 112357999999999865421 111111110 01112345556677777776 79988776
Q ss_pred cc--cCCccccHHHHHHHHHh
Q 006372 151 TC--SMNPVENEAVVAEILRK 169 (648)
Q Consensus 151 TC--Sl~p~ENEaVV~~~L~~ 169 (648)
+= .|+..-.+.-|.+.|-+
T Consensus 362 lP~g~Lf~~~~~~~iRk~Lle 382 (530)
T 3ufb_A 362 VPNGTLFSDGISARIKEELLK 382 (530)
T ss_dssp EEHHHHHCCTHHHHHHHHHHH
T ss_pred ecchhhhccchHHHHHHHHhh
Confidence 43 34433334545554443
No 253
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=94.21 E-value=0.063 Score=51.10 Aligned_cols=93 Identities=14% Similarity=0.041 Sum_probs=59.7
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+|++|..+..+++. ...|+++|.++..+...+++. . .+...|+..+.. .
T Consensus 40 G~G~G~~~~~l~~~-----------~~~~~~~D~~~~~~~~~~~~~-----~--~~~~~d~~~~~~-~------------ 88 (230)
T 3cc8_A 40 GCSSGALGAAIKEN-----------GTRVSGIEAFPEAAEQAKEKL-----D--HVVLGDIETMDM-P------------ 88 (230)
T ss_dssp TCTTSHHHHHHHTT-----------TCEEEEEESSHHHHHHHHTTS-----S--EEEESCTTTCCC-C------------
T ss_pred CCCCCHHHHHHHhc-----------CCeEEEEeCCHHHHHHHHHhC-----C--cEEEcchhhcCC-C------------
Confidence 57888888877553 258999999998777665432 1 344555543210 0
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
.....||.|++.. ++..-++ ...+|..+.++|+|||+++.++-.
T Consensus 89 ------~~~~~fD~v~~~~------~l~~~~~----------------~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 89 ------YEEEQFDCVIFGD------VLEHLFD----------------PWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp ------SCTTCEEEEEEES------CGGGSSC----------------HHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred ------CCCCccCEEEECC------hhhhcCC----------------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 1125799999842 2211111 136799999999999999998754
No 254
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=94.06 E-value=0.022 Score=59.36 Aligned_cols=69 Identities=14% Similarity=0.015 Sum_probs=42.1
Q ss_pred ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccC-cEEEEecccCCccccHHHHHHHHHh
Q 006372 91 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVG-GRIVYSTCSMNPVENEAVVAEILRK 169 (648)
Q Consensus 91 ~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~G-G~LVYSTCSl~p~ENEaVV~~~L~~ 169 (648)
..||.||+|.-.+ +|.- ..+ +..|..||.-|.+.|+|| |.+|--.--.+ -+...-..+.|++
T Consensus 146 ~~~DlVlsD~APn-sG~~----------~~D-----~~rs~~LL~~A~~~LkpG~G~FV~KvF~~y-G~~~~~ll~~lk~ 208 (300)
T 3eld_A 146 EPSDTLLCDIGES-SSNP----------LVE-----RDRTMKVLENFERWKHVNTENFCVKVLAPY-HPDVIEKLERLQL 208 (300)
T ss_dssp CCCSEEEECCCCC-CSSH----------HHH-----HHHHHHHHHHHHHHCCTTCCEEEEEESSTT-SHHHHHHHHHHHH
T ss_pred CCcCEEeecCcCC-CCCH----------HHH-----HHHHHHHHHHHHHHhcCCCCcEEEEecccc-CccHHHHHHHHHH
Confidence 5799999999888 8841 111 224455589999999999 99886532211 3333333444444
Q ss_pred CCCceEE
Q 006372 170 CEGSVEL 176 (648)
Q Consensus 170 ~~g~veL 176 (648)
+-..+..
T Consensus 209 ~F~~V~~ 215 (300)
T 3eld_A 209 RFGGGIV 215 (300)
T ss_dssp HHCCEEE
T ss_pred hCCcEEE
Confidence 3334544
No 255
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=94.02 E-value=0.26 Score=50.77 Aligned_cols=127 Identities=13% Similarity=0.045 Sum_probs=85.8
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCCh--------------------------HHHHHHHHHHHHhCC--CcE
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDV--------------------------QRCNLLIHQTKRMCT--ANL 55 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~--------------------------kR~~~L~~~lkRlg~--~nv 55 (648)
+-|+-+.+|++++.... .+.+.|+++|... .+....++++++.|. .++
T Consensus 116 ~~G~Sai~ma~~l~~~g----~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl~~~~I 191 (282)
T 2wk1_A 116 WRGGACILMRGILRAHD----VRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDLLDEQV 191 (282)
T ss_dssp TTSHHHHHHHHHHHHTT----CCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTCCSTTE
T ss_pred CchHHHHHHHHHhHhcC----CCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCCCcCce
Confidence 45777888888775310 1257899999631 157778999999997 689
Q ss_pred EEeecccccC-CCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHH
Q 006372 56 IVTNHEAQHF-PGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIA 134 (648)
Q Consensus 56 ~vtn~Da~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL 134 (648)
.++..++... |.. ....||.|++|+- +..-....|
T Consensus 192 ~li~Gda~etL~~~--------------------~~~~~d~vfIDaD------------------------~y~~~~~~L 227 (282)
T 2wk1_A 192 RFLPGWFKDTLPTA--------------------PIDTLAVLRMDGD------------------------LYESTWDTL 227 (282)
T ss_dssp EEEESCHHHHSTTC--------------------CCCCEEEEEECCC------------------------SHHHHHHHH
T ss_pred EEEEeCHHHHHhhC--------------------CCCCEEEEEEcCC------------------------ccccHHHHH
Confidence 9998887542 211 1246999999973 011124568
Q ss_pred HHHhhccccCcEEEEecccCCccccHHHHHHHHHhCCCceEEEeC
Q 006372 135 MRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 179 (648)
Q Consensus 135 ~~Al~lLk~GG~LVYSTCSl~p~ENEaVV~~~L~~~~g~veLvd~ 179 (648)
...+.+|+|||.||.=-....|.+ -.-|.+++++.+-.+.+.++
T Consensus 228 e~~~p~L~pGGiIv~DD~~~~~G~-~~Av~Ef~~~~~i~~~i~~~ 271 (282)
T 2wk1_A 228 TNLYPKVSVGGYVIVDDYMMCPPC-KDAVDEYRAKFDIADELITI 271 (282)
T ss_dssp HHHGGGEEEEEEEEESSCTTCHHH-HHHHHHHHHHTTCCSCCEEC
T ss_pred HHHHhhcCCCEEEEEcCCCCCHHH-HHHHHHHHHhcCCceEEEEe
Confidence 889999999999998776444544 44566677777655554444
No 256
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=93.94 E-value=0.41 Score=55.30 Aligned_cols=91 Identities=11% Similarity=0.081 Sum_probs=62.2
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCC
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG 106 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdG 106 (648)
..|++.|+|+.-+...+.|+++.|..+ +.+...|+..+... .....||.|+++||= |
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~-------------------~~~~~~d~Iv~NPPY---G 314 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP-------------------LPKGPYGTVLSNPPY---G 314 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCS-------------------CTTCCCCEEEECCCC---C
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccc-------------------cccCCCCEEEeCCCc---c
Confidence 579999999999999999999999976 88888888764210 001269999999993 1
Q ss_pred ccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 107 TLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 107 tlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
. ++ .....+..+... |.+.++.+.+||+++.-|-
T Consensus 315 ~---------Rl--g~~~~l~~ly~~-l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 315 E---------RL--DSEPALIALHSL-LGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp C--------------CCHHHHHHHHH-HHHHHHHHCTTCEEEEEES
T ss_pred c---------cc--cchhHHHHHHHH-HHHHHHhhCCCCeEEEEeC
Confidence 1 11 111233444333 4566777779998776643
No 257
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=93.74 E-value=0.13 Score=55.17 Aligned_cols=94 Identities=13% Similarity=0.130 Sum_probs=63.0
Q ss_pred CEEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCC
Q 006372 27 NGMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 105 (648)
Q Consensus 27 ~G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGd 105 (648)
...|+|+|.++ =+...+++++..|.. .|.+++.+...+. + ..+||.|+...- |.
T Consensus 106 A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~---l-------------------pe~~DvivsE~~--~~ 160 (376)
T 4hc4_A 106 ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE---L-------------------PEQVDAIVSEWM--GY 160 (376)
T ss_dssp CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC---C-------------------SSCEEEEECCCC--BT
T ss_pred CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec---C-------------------CccccEEEeecc--cc
Confidence 35899999986 467777888888875 4888888766542 0 157999997542 22
Q ss_pred CccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC--CccccHHH
Q 006372 106 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM--NPVENEAV 162 (648)
Q Consensus 106 Gtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl--~p~ENEaV 162 (648)
+.+ +..+ -..+|...-++|||||+++-+.|++ .|+|.+..
T Consensus 161 ~l~--~e~~---------------l~~~l~a~~r~Lkp~G~~iP~~atly~apie~~~l 202 (376)
T 4hc4_A 161 GLL--HESM---------------LSSVLHARTKWLKEGGLLLPASAELFIVPISDQML 202 (376)
T ss_dssp TBT--TTCS---------------HHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHH
T ss_pred ccc--ccch---------------hhhHHHHHHhhCCCCceECCccceEEEEEeccchh
Confidence 221 1100 1234555568999999999999985 47777543
No 258
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=93.70 E-value=0.2 Score=51.26 Aligned_cols=23 Identities=30% Similarity=0.306 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhhccccCcEEEEe
Q 006372 128 SLQVQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 128 ~lQ~~IL~~Al~lLk~GG~LVYS 150 (648)
..|.+++.+..+.|+|||.|+..
T Consensus 229 ~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 229 TTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCcEEEEE
Confidence 45899999999999999999864
No 259
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=93.06 E-value=0.18 Score=52.16 Aligned_cols=66 Identities=17% Similarity=0.128 Sum_probs=53.3
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
.+++|.-|..|++. .+.|+|+|+|+.-+..+++++. +.+++.+++.|+..++.
T Consensus 58 G~G~G~lT~~La~~-----------~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~~-------------- 110 (295)
T 3gru_A 58 GLGKGILTEELAKN-----------AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVDL-------------- 110 (295)
T ss_dssp CCTTSHHHHHHHHH-----------SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSCG--------------
T ss_pred CCCchHHHHHHHhc-----------CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCCc--------------
Confidence 57899999999875 2589999999999999998887 45789999999876531
Q ss_pred cccccccccccccEEEEcCC
Q 006372 82 IESESNMGQLLFDRVLCDVP 101 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvP 101 (648)
....||+|+...|
T Consensus 111 -------~~~~fD~Iv~NlP 123 (295)
T 3gru_A 111 -------NKLDFNKVVANLP 123 (295)
T ss_dssp -------GGSCCSEEEEECC
T ss_pred -------ccCCccEEEEeCc
Confidence 0135999999888
No 260
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=92.96 E-value=0.15 Score=52.51 Aligned_cols=70 Identities=16% Similarity=0.171 Sum_probs=40.5
Q ss_pred ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccC-cEEEEecccCCccccHHHHHHHHHh
Q 006372 91 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVG-GRIVYSTCSMNPVENEAVVAEILRK 169 (648)
Q Consensus 91 ~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~G-G~LVYSTCSl~p~ENEaVV~~~L~~ 169 (648)
..||.||+|.-=+ +|. .|. . +..|..||.-|.+.|+|| |.+|...-.-.-.+-.+.+ +.|++
T Consensus 139 ~~~DlVlsD~apn-sG~---------~~~----D--~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~-~~lk~ 201 (277)
T 3evf_A 139 VKCDTLLCDIGES-SSS---------SVT----E--GERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKL-ELLQR 201 (277)
T ss_dssp CCCSEEEECCCCC-CSC---------HHH----H--HHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHH-HHHHH
T ss_pred CCccEEEecCccC-cCc---------hHH----H--HHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHH-HHHHH
Confidence 5799999997434 553 111 1 123344589999999999 9998854332123333344 44554
Q ss_pred CCCceEEE
Q 006372 170 CEGSVELV 177 (648)
Q Consensus 170 ~~g~veLv 177 (648)
.-..+...
T Consensus 202 ~F~~V~~~ 209 (277)
T 3evf_A 202 RFGGTVIR 209 (277)
T ss_dssp HHCCEEEC
T ss_pred hcCCEEEE
Confidence 33345543
No 261
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=92.88 E-value=0.09 Score=56.42 Aligned_cols=64 Identities=22% Similarity=0.273 Sum_probs=44.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|||||.|.++++. .|.|+|+|..+ |... .+..++|.....|+..+.-
T Consensus 218 LGAaPGGWT~~l~~r-----------g~~V~aVD~~~-----l~~~--l~~~~~V~~~~~d~~~~~~------------- 266 (375)
T 4auk_A 218 LGACPGGWTYQLVKR-----------NMWVYSVDNGP-----MAQS--LMDTGQVTWLREDGFKFRP------------- 266 (375)
T ss_dssp ETCTTCHHHHHHHHT-----------TCEEEEECSSC-----CCHH--HHTTTCEEEECSCTTTCCC-------------
T ss_pred eCcCCCHHHHHHHHC-----------CCEEEEEEhhh-----cChh--hccCCCeEEEeCccccccC-------------
Confidence 479999999998764 47999999753 1111 1345788888888766421
Q ss_pred CcccccccccccccEEEEcCCCC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCS 103 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCS 103 (648)
....||.|+||.-|.
T Consensus 267 --------~~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 267 --------TRSNISWMVCDMVEK 281 (375)
T ss_dssp --------CSSCEEEEEECCSSC
T ss_pred --------CCCCcCEEEEcCCCC
Confidence 124699999998753
No 262
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=92.87 E-value=0.031 Score=55.62 Aligned_cols=93 Identities=15% Similarity=0.065 Sum_probs=55.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeec-ccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNH-EAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~-Da~~~p~~~~~~~~~~~~~ 79 (648)
++|++|+-|..|++. +.+.|+|+|+++.-+.....+ .+.+.+... +......
T Consensus 44 iGcGtG~~t~~la~~----------g~~~V~gvDis~~ml~~a~~~-----~~~~~~~~~~~~~~~~~------------ 96 (232)
T 3opn_A 44 IGSSTGGFTDVMLQN----------GAKLVYALDVGTNQLAWKIRS-----DERVVVMEQFNFRNAVL------------ 96 (232)
T ss_dssp ETCTTSHHHHHHHHT----------TCSEEEEECSSCCCCCHHHHT-----CTTEEEECSCCGGGCCG------------
T ss_pred EccCCCHHHHHHHhc----------CCCEEEEEcCCHHHHHHHHHh-----CccccccccceEEEeCH------------
Confidence 368899999888764 134899999998765542221 222222211 1111100
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
.......||.+.+|+..+.. ..+|..+.++|||||+++..+
T Consensus 97 ------~~~~~~~~d~~~~D~v~~~l-------------------------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 97 ------ADFEQGRPSFTSIDVSFISL-------------------------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp ------GGCCSCCCSEEEECCSSSCG-------------------------GGTHHHHHHHSCTTCEEEEEE
T ss_pred ------hHcCcCCCCEEEEEEEhhhH-------------------------HHHHHHHHHhccCCCEEEEEE
Confidence 00111236888888865431 347899999999999999853
No 263
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=92.71 E-value=0.17 Score=54.40 Aligned_cols=130 Identities=17% Similarity=0.110 Sum_probs=73.7
Q ss_pred CEEEEEEcCChHHHHHHHHHHHHh-----C---CCcEEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEE
Q 006372 27 NGMVIANDLDVQRCNLLIHQTKRM-----C---TANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLC 98 (648)
Q Consensus 27 ~G~ViAnD~d~kR~~~L~~~lkRl-----g---~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILl 98 (648)
...|+++|+|+.=+++.++-+..+ . .+++.++..||..|..-. .....+||.|++
T Consensus 228 ~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~-----------------~~~~~~yDvIIv 290 (381)
T 3c6k_A 228 PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRY-----------------AKEGREFDYVIN 290 (381)
T ss_dssp CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHH-----------------HHHTCCEEEEEE
T ss_pred CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhh-----------------hhccCceeEEEE
Confidence 358999999998777666543221 1 134788888887763200 011257999999
Q ss_pred cCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEE-ecccCCccccHHHHHHHHHhCCCceEEE
Q 006372 99 DVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVY-STCSMNPVENEAVVAEILRKCEGSVELV 177 (648)
Q Consensus 99 DvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVY-STCSl~p~ENEaVV~~~L~~~~g~veLv 177 (648)
|++=...++ .|. .....-..++.+..+.+.|++||++|. +.|-..+ +.-..+...|++....+...
T Consensus 291 Dl~D~~~s~---~p~---------g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~-~~~~~i~~tl~~vF~~v~~~ 357 (381)
T 3c6k_A 291 DLTAVPIST---SPE---------EDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT-EALSLYEEQLGRLYCPVEFS 357 (381)
T ss_dssp ECCSSCCCC---C-------------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH-HHHHHHHHHHTTSSSCEEEE
T ss_pred CCCCCcccC---ccc---------CcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcch-hHHHHHHHHHHHhCCcceEe
Confidence 986211111 110 111233567888999999999999886 4454433 33334455555544445443
Q ss_pred eCCCcCCcc
Q 006372 178 DVSNEVPQL 186 (648)
Q Consensus 178 d~s~~lP~l 186 (648)
......|.+
T Consensus 358 ~~~~~VPSy 366 (381)
T 3c6k_A 358 KEIVCVPSY 366 (381)
T ss_dssp EEEECCGGG
T ss_pred eEEEEecCC
Confidence 322335653
No 264
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=92.45 E-value=0.28 Score=50.97 Aligned_cols=86 Identities=12% Similarity=0.103 Sum_probs=60.4
Q ss_pred CEEEEEEcCChHHHHHHHHHHHHh-----CCCcEEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCC
Q 006372 27 NGMVIANDLDVQRCNLLIHQTKRM-----CTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVP 101 (648)
Q Consensus 27 ~G~ViAnD~d~kR~~~L~~~lkRl-----g~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvP 101 (648)
-..|+.+|+|+.=+++.+.-+..+ .-+++.|+..||..|... ...+||.|++|.+
T Consensus 107 v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~--------------------~~~~yDvIi~D~~ 166 (294)
T 3o4f_A 107 VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ--------------------TSQTFDVIISDCT 166 (294)
T ss_dssp CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC--------------------SSCCEEEEEESCC
T ss_pred cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh--------------------ccccCCEEEEeCC
Confidence 358999999999888887776443 347899999999887421 1257999999987
Q ss_pred CCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEe
Q 006372 102 CSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 102 CSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYS 150 (648)
- ..|. ...+ ...+.+..+.+.|+|||++|.-
T Consensus 167 d-p~~~---~~~L--------------~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 167 D-PIGP---GESL--------------FTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp C-CCCT---TCCS--------------SCCHHHHHHHHTEEEEEEEEEE
T ss_pred C-cCCC---chhh--------------cCHHHHHHHHHHhCCCCEEEEe
Confidence 2 1121 0011 2345577788899999999864
No 265
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=92.30 E-value=0.068 Score=55.36 Aligned_cols=72 Identities=22% Similarity=0.206 Sum_probs=53.9
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
+++-||.|..|++. .|.|+|+|.|+.-+...++ ++. .++.+++.+...++...-
T Consensus 30 T~G~GGHS~~il~~-----------~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~----------- 83 (285)
T 1wg8_A 30 TLGGAGHARGILER-----------GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLA----------- 83 (285)
T ss_dssp TCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHH-----------
T ss_pred CCCCcHHHHHHHHC-----------CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHH-----------
Confidence 57899999999875 3799999999998887766 533 578888888776643210
Q ss_pred cccccccccccccEEEEcCCCCC
Q 006372 82 IESESNMGQLLFDRVLCDVPCSG 104 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSG 104 (648)
.....+||.||+|...|+
T Consensus 84 -----~~g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 84 -----ALGVERVDGILADLGVSS 101 (285)
T ss_dssp -----HTTCSCEEEEEEECSCCH
T ss_pred -----HcCCCCcCEEEeCCcccc
Confidence 001146999999999887
No 266
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=92.18 E-value=0.38 Score=50.61 Aligned_cols=143 Identities=13% Similarity=0.172 Sum_probs=72.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||+.||-+.-+...- ..--.|+|+|.++..++.+++|.. +..+.+.|...+...
T Consensus 8 LFaG~Gg~~~g~~~~G--------~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~------------ 62 (343)
T 1g55_A 8 LYSGVGGMHHALRESC--------IPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLE------------ 62 (343)
T ss_dssp ETCTTCHHHHHHHHHT--------CSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHH------------
T ss_pred eCcCccHHHHHHHHCC--------CCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHh------------
Confidence 5899999998775541 001379999999999999988753 333455665543210
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccc--cCcEEEE--ecccCCc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLK--VGGRIVY--STCSMNP 156 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk--~GG~LVY--STCSl~p 156 (648)
......+|.|+.++||.+-.+..+....- +....|. .. +.+.++.++ | -.+|+ ..|=++.
T Consensus 63 ------~~~~~~~D~l~~gpPCq~fS~ag~~~g~~-----d~r~~l~---~~-~~~~i~~~~~~P-~~~~~ENV~~l~~~ 126 (343)
T 1g55_A 63 ------EFDRLSFDMILMSPPCQPFTRIGRQGDMT-----DSRTNSF---LH-ILDILPRLQKLP-KYILLENVKGFEVS 126 (343)
T ss_dssp ------HHHHHCCSEEEECCC-----------------------CHH---HH-HHHHGGGCSSCC-SEEEEEEETTGGGS
T ss_pred ------HcCcCCcCEEEEcCCCcchhhcCCcCCcc-----CccchHH---HH-HHHHHHHhcCCC-CEEEEeCCccccCH
Confidence 00012689999999998887765433210 0011111 12 234566666 7 56666 4442322
Q ss_pred cccHHHHHHHHHhCCCc--eEEEeCCCc-CCc
Q 006372 157 VENEAVVAEILRKCEGS--VELVDVSNE-VPQ 185 (648)
Q Consensus 157 ~ENEaVV~~~L~~~~g~--veLvd~s~~-lP~ 185 (648)
+.-+.+...|++.|-. ..+++..+- +|+
T Consensus 127 -~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ 157 (343)
T 1g55_A 127 -STRDLLIQTIENCGFQYQEFLLSPTSLGIPN 157 (343)
T ss_dssp -HHHHHHHHHHHHTTEEEEEEEECGGGGTCSC
T ss_pred -HHHHHHHHHHHHCCCeeEEEEEEHHHCCCCC
Confidence 3334555666665532 334555443 444
No 267
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=92.15 E-value=1.1 Score=45.33 Aligned_cols=97 Identities=9% Similarity=-0.029 Sum_probs=57.3
Q ss_pred CCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCC
Q 006372 26 PNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 105 (648)
Q Consensus 26 ~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGd 105 (648)
|.+.|+++|.|+.-+...++++.. ..++.++..|....+.+.-.. ..........||.|++-.
T Consensus 103 p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~~~~~----------~~~~~~d~~~~d~v~~~~----- 165 (274)
T 2qe6_A 103 PDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYILNHP----------DVRRMIDFSRPAAIMLVG----- 165 (274)
T ss_dssp TTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHHHHSH----------HHHHHCCTTSCCEEEETT-----
T ss_pred CCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhhhccc----------hhhccCCCCCCEEEEEec-----
Confidence 457999999998777766665532 356888888765421100000 000000113688888632
Q ss_pred CccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 106 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 106 Gtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
++ .-+... -...+|.+..+.|+|||+|+.++...
T Consensus 166 -vl-------h~~~d~-------~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 166 -ML-------HYLSPD-------VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp -TG-------GGSCTT-------THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred -hh-------hhCCcH-------HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 11 111111 13568999999999999999998765
No 268
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=91.70 E-value=0.08 Score=56.16 Aligned_cols=78 Identities=18% Similarity=0.118 Sum_probs=55.2
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+|.+-||.|..|++.+. +.|.|+|+|.|+.-+... +||...++.+++.+...+....-
T Consensus 64 ~TlG~GGHS~~iL~~lg--------~~GrVig~D~Dp~Al~~A----~rL~~~Rv~lv~~nF~~l~~~L~---------- 121 (347)
T 3tka_A 64 GTFGRGGHSRLILSQLG--------EEGRLLAIDRDPQAIAVA----KTIDDPRFSIIHGPFSALGEYVA---------- 121 (347)
T ss_dssp SCCTTSHHHHHHHTTCC--------TTCEEEEEESCHHHHHHH----TTCCCTTEEEEESCGGGHHHHHH----------
T ss_pred eCcCCCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHH----HhhcCCcEEEEeCCHHHHHHHHH----------
Confidence 47889999999988753 479999999999877755 25544678888777666533210
Q ss_pred CcccccccccccccEEEEcCCCCCC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGD 105 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGd 105 (648)
. ..-...+|.||+|-.||+.
T Consensus 122 ----~-~g~~~~vDgILfDLGVSS~ 141 (347)
T 3tka_A 122 ----E-RDLIGKIDGILLDLGVSSP 141 (347)
T ss_dssp ----H-TTCTTCEEEEEEECSCCHH
T ss_pred ----h-cCCCCcccEEEECCccCHH
Confidence 0 0001259999999999973
No 269
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=91.18 E-value=0.017 Score=57.31 Aligned_cols=71 Identities=17% Similarity=0.251 Sum_probs=52.6
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
++|++|.-|.++++. .+.|+|+|+|+.-+..++++++ +..++.+.+.|+..++..
T Consensus 36 iG~G~G~~~~~l~~~-----------~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~------------ 90 (245)
T 1yub_A 36 IGTGKGHLTTKLAKI-----------SKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFP------------ 90 (245)
T ss_dssp CSCCCSSCSHHHHHH-----------SSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCC------------
T ss_pred EeCCCCHHHHHHHHh-----------CCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCcc------------
Confidence 478999999998875 2589999999988877766654 346889999988765410
Q ss_pred CcccccccccccccEEEEcCCCCCC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGD 105 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGd 105 (648)
....| .|++++|-..+
T Consensus 91 --------~~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 91 --------NKQRY-KIVGNIPYHLS 106 (245)
T ss_dssp --------CSSEE-EEEEECCSSSC
T ss_pred --------cCCCc-EEEEeCCcccc
Confidence 01358 89999996543
No 270
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=90.72 E-value=0.061 Score=55.57 Aligned_cols=69 Identities=14% Similarity=0.089 Sum_probs=39.5
Q ss_pred ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccC--cEEEEecccCCc-cccHHHHHHHH
Q 006372 91 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVG--GRIVYSTCSMNP-VENEAVVAEIL 167 (648)
Q Consensus 91 ~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~G--G~LVYSTCSl~p-~ENEaVV~~~L 167 (648)
.+||.||+|.-=+ +|. .| .. +..|..||.-|.+.|+|| |.+|.-. +.| -+...-..+.|
T Consensus 155 ~~~DvVLSDmApn-sG~---------~~----~D--~~rs~~LL~~A~~~Lk~g~~G~Fv~Kv--F~pyg~~~~~l~~~l 216 (282)
T 3gcz_A 155 IPGDTLLCDIGES-SPS---------IA----VE--EQRTLRVLNCAKQWLQEGNYTEFCIKV--LCPYTPLIMEELSRL 216 (282)
T ss_dssp CCCSEEEECCCCC-CSC---------HH----HH--HHHHHHHHHHHHHHHHHHCCCEEEEEE--SCCCSHHHHHHHHHH
T ss_pred CCcCEEEecCccC-CCC---------hH----HH--HHHHHHHHHHHHHHcCCCCCCcEEEEE--ecCCCccHHHHHHHH
Confidence 5799999996534 553 11 11 223344588899999999 9987643 221 33333334445
Q ss_pred HhCCCceEEE
Q 006372 168 RKCEGSVELV 177 (648)
Q Consensus 168 ~~~~g~veLv 177 (648)
++.-..+...
T Consensus 217 k~~F~~V~~~ 226 (282)
T 3gcz_A 217 QLKHGGGLVR 226 (282)
T ss_dssp HHHHCCEEEC
T ss_pred HHhcCCEEEE
Confidence 5433345443
No 271
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=90.58 E-value=0.36 Score=50.51 Aligned_cols=59 Identities=20% Similarity=0.162 Sum_probs=47.4
Q ss_pred ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccHHHHHHHHHhC
Q 006372 91 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKC 170 (648)
Q Consensus 91 ~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENEaVV~~~L~~~ 170 (648)
..||.|++|+= .-++||++|. ..++....++++|||+++--||+ ..|.+.|...
T Consensus 185 ~~~Da~flDgF-----sP~kNPeLWs--------------~e~f~~l~~~~~pgg~laTYtaa-------g~VRR~L~~a 238 (308)
T 3vyw_A 185 FKADAVFHDAF-----SPYKNPELWT--------------LDFLSLIKERIDEKGYWVSYSSS-------LSVRKSLLTL 238 (308)
T ss_dssp CCEEEEEECCS-----CTTTSGGGGS--------------HHHHHHHHTTEEEEEEEEESCCC-------HHHHHHHHHT
T ss_pred cceeEEEeCCC-----CcccCcccCC--------------HHHHHHHHHHhCCCcEEEEEeCc-------HHHHHHHHHC
Confidence 46999999972 1278999975 46789999999999999866665 7899999998
Q ss_pred CCceE
Q 006372 171 EGSVE 175 (648)
Q Consensus 171 ~g~ve 175 (648)
|-.|+
T Consensus 239 GF~V~ 243 (308)
T 3vyw_A 239 GFKVG 243 (308)
T ss_dssp TCEEE
T ss_pred CCEEE
Confidence 84444
No 272
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=90.37 E-value=1.1 Score=46.40 Aligned_cols=97 Identities=13% Similarity=0.088 Sum_probs=60.3
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
.+++|.-+..+++.. |...+++.|.+ .-+. +.++++.+. .++.+..+|... +
T Consensus 192 G~G~G~~~~~l~~~~---------p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~-~-------------- 244 (348)
T 3lst_A 192 GGGRGGFLLTVLREH---------PGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLR-E-------------- 244 (348)
T ss_dssp TCTTSHHHHHHHHHC---------TTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTT-C--------------
T ss_pred CCccCHHHHHHHHHC---------CCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCC-C--------------
Confidence 578898888887763 45678999983 2211 222222333 357777776531 0
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
.. .||.|++-- +...|... ...++|.++.+.|||||+|+.....+
T Consensus 245 --------~p-~~D~v~~~~-------------vlh~~~d~-------~~~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 245 --------VP-HADVHVLKR-------------ILHNWGDE-------DSVRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp --------CC-CCSEEEEES-------------CGGGSCHH-------HHHHHHHHHHHTCCTTCEEEEEECCB
T ss_pred --------CC-CCcEEEEeh-------------hccCCCHH-------HHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 01 589998722 22334322 12678999999999999998876544
No 273
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=89.75 E-value=4.6 Score=42.96 Aligned_cols=83 Identities=11% Similarity=0.152 Sum_probs=52.9
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||+.||-+.-+... +--.|+|+|.|+..++.+++|. ++..+.+.|...+....+
T Consensus 8 LFsG~GGlslG~~~a----------G~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~---------- 62 (376)
T 3g7u_A 8 LFSGVGGLSLGAARA----------GFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEII---------- 62 (376)
T ss_dssp ETCTTSHHHHHHHHH----------TCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHH----------
T ss_pred EccCcCHHHHHHHHC----------CCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHH----------
Confidence 589999999877553 1246889999999999988774 445566677655421100
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKA 111 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~ 111 (648)
.. .......+|.|+.++||.+--...++
T Consensus 63 --~~-~~~~~~~~D~i~ggpPCQ~fS~ag~~ 90 (376)
T 3g7u_A 63 --KG-FFKNDMPIDGIIGGPPCQGFSSIGKG 90 (376)
T ss_dssp --HH-HHCSCCCCCEEEECCCCCTTC-----
T ss_pred --Hh-hcccCCCeeEEEecCCCCCcccccCC
Confidence 00 00012569999999999888776544
No 274
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=89.29 E-value=0.057 Score=55.87 Aligned_cols=55 Identities=9% Similarity=0.026 Sum_probs=41.9
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCC
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVP 101 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvP 101 (648)
..++.+|.+++.+..|++|++. ..++.|.+.|+..+..... ....+||.||+|||
T Consensus 114 d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~-----------------~~~~~fdLVfiDPP 168 (283)
T 2oo3_A 114 DRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALL-----------------PPPEKRGLIFIDPS 168 (283)
T ss_dssp SEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHC-----------------SCTTSCEEEEECCC
T ss_pred CeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhc-----------------CCCCCccEEEECCC
Confidence 5899999999999999999875 4678999998755321111 11246999999999
No 275
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=88.57 E-value=1.9 Score=45.05 Aligned_cols=101 Identities=12% Similarity=0.103 Sum_probs=62.6
Q ss_pred ccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCc
Q 006372 3 AAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGI 82 (648)
Q Consensus 3 AAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~ 82 (648)
++.|.-+..|++. .|.-.++..|. +.=+...+.++..-+..+|.+..+|...-|
T Consensus 188 gG~G~~~~~l~~~---------~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~---------------- 241 (353)
T 4a6d_A 188 GGAGALAKECMSL---------YPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP---------------- 241 (353)
T ss_dssp CTTSHHHHHHHHH---------CSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC----------------
T ss_pred CCCCHHHHHHHHh---------CCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC----------------
Confidence 5677777777665 24556777886 443444444333334578888888753311
Q ss_pred ccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCc
Q 006372 83 ESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNP 156 (648)
Q Consensus 83 ~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p 156 (648)
...+|.|++= .+...|+.... .+||+++.+.|+|||+|+-.-.-+.+
T Consensus 242 -------~~~~D~~~~~-------------~vlh~~~d~~~-------~~iL~~~~~al~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 242 -------LPEADLYILA-------------RVLHDWADGKC-------SHLLERIYHTCKPGGGILVIESLLDE 288 (353)
T ss_dssp -------CCCCSEEEEE-------------SSGGGSCHHHH-------HHHHHHHHHHCCTTCEEEEEECCCCT
T ss_pred -------CCCceEEEee-------------eecccCCHHHH-------HHHHHHHHhhCCCCCEEEEEEeeeCC
Confidence 1246888761 13455654433 57899999999999998877655543
No 276
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=86.86 E-value=1.1 Score=46.97 Aligned_cols=74 Identities=14% Similarity=0.069 Sum_probs=51.8
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||+.||-+.-+..+ +--.|+|+|.|+..+..+++|.... .+.|...+...
T Consensus 17 LFaG~Gg~~~g~~~a----------G~~~v~~~e~d~~a~~t~~~N~~~~-------~~~Di~~~~~~------------ 67 (327)
T 2c7p_A 17 LFAGLGGFRLALESC----------GAECVYSNEWDKYAQEVYEMNFGEK-------PEGDITQVNEK------------ 67 (327)
T ss_dssp ETCTTTHHHHHHHHT----------TCEEEEEECCCHHHHHHHHHHHSCC-------CBSCGGGSCGG------------
T ss_pred ECCCcCHHHHHHHHC----------CCeEEEEEeCCHHHHHHHHHHcCCC-------CcCCHHHcCHh------------
Confidence 589999998877442 1357999999999999999886321 14454443210
Q ss_pred CcccccccccccccEEEEcCCCCCCCccccC
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRKA 111 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~ 111 (648)
....+|.|+.++||.+--...+.
T Consensus 68 --------~~~~~D~l~~gpPCQ~fS~ag~~ 90 (327)
T 2c7p_A 68 --------TIPDHDILCAGFPCQAFSISGKQ 90 (327)
T ss_dssp --------GSCCCSEEEEECCCTTTCTTSCC
T ss_pred --------hCCCCCEEEECCCCCCcchhccc
Confidence 11358999999999988776654
No 277
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=86.81 E-value=0.15 Score=52.22 Aligned_cols=29 Identities=7% Similarity=0.086 Sum_probs=20.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIAND 34 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD 34 (648)
+.|||||-+-.+++...-. ...|.|+|.|
T Consensus 80 LGaAPGGWSQvAa~~~~vg-----~V~G~vig~D 108 (269)
T 2px2_A 80 LGCGRGGWSYYAATMKNVQ-----EVRGYTKGGP 108 (269)
T ss_dssp ETCTTSHHHHHHTTSTTEE-----EEEEECCCST
T ss_pred cCCCCCHHHHHHhhhcCCC-----CceeEEEccc
Confidence 4799999999888762110 0148889988
No 278
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=86.07 E-value=0.73 Score=46.49 Aligned_cols=52 Identities=17% Similarity=0.204 Sum_probs=42.4
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 66 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p 66 (648)
++++|.-|..|++. .+.|+|+|+|+.-+..+++++.. .+++.+.+.|+..++
T Consensus 37 G~G~G~lt~~La~~-----------~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~ 88 (255)
T 3tqs_A 37 GPGRGALTDYLLTE-----------CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFD 88 (255)
T ss_dssp CCTTTTTHHHHTTT-----------SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCC
T ss_pred cccccHHHHHHHHh-----------CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCC
Confidence 67888888887653 25899999999999999887754 468999999988764
No 279
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=85.22 E-value=2.3 Score=43.74 Aligned_cols=79 Identities=14% Similarity=0.017 Sum_probs=55.2
Q ss_pred CCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCC
Q 006372 26 PNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 105 (648)
Q Consensus 26 ~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGd 105 (648)
|...++|+|+|..-++.+++++.++|.. ..+...|-..- .-...||.||+=
T Consensus 155 p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~----------------------~p~~~~DvaL~l------ 205 (281)
T 3lcv_B 155 AETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLED----------------------RLDEPADVTLLL------ 205 (281)
T ss_dssp TTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTS----------------------CCCSCCSEEEET------
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeeccc----------------------CCCCCcchHHHH------
Confidence 6789999999999999999999999987 44444442210 012569999871
Q ss_pred CccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEE
Q 006372 106 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 148 (648)
Q Consensus 106 Gtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LV 148 (648)
..+.-|...|+.-+.+.++.|++||.+|
T Consensus 206 ---------------kti~~Le~q~kg~g~~ll~aL~~~~vvV 233 (281)
T 3lcv_B 206 ---------------KTLPCLETQQRGSGWEVIDIVNSPNIVV 233 (281)
T ss_dssp ---------------TCHHHHHHHSTTHHHHHHHHSSCSEEEE
T ss_pred ---------------HHHHHhhhhhhHHHHHHHHHhCCCCEEE
Confidence 1123344444545558999999988766
No 280
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=83.96 E-value=1.2 Score=45.73 Aligned_cols=107 Identities=11% Similarity=0.018 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCcccc
Q 006372 6 GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESE 85 (648)
Q Consensus 6 GgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~ 85 (648)
|+-+.++++.+. |...|+++|.|+.=+..-+.++...+..++.++..|...++.+.-..
T Consensus 92 ~~~~~~la~~~~--------P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~------------- 150 (277)
T 3giw_A 92 SPNLHEIAQSVA--------PESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAP------------- 150 (277)
T ss_dssp SSCHHHHHHHHC--------TTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCH-------------
T ss_pred ccHHHHHHHHHC--------CCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccc-------------
Confidence 455666766553 46799999999875544444332222236888888876642111000
Q ss_pred ccccccccc-----EEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 86 SNMGQLLFD-----RVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 86 ~~~~~~~FD-----rILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
.....|| .|++- +++ .|-+.. ..+..+|.+..+.|+|||+|+.|+-+-
T Consensus 151 --~~~~~~D~~~p~av~~~------avL--------H~l~d~-----~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 151 --ELRDTLDLTRPVALTVI------AIV--------HFVLDE-----DDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp --HHHTTCCTTSCCEEEEE------SCG--------GGSCGG-----GCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred --ccccccCcCCcchHHhh------hhH--------hcCCch-----hhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 0001233 34442 222 121111 113578999999999999999998664
No 281
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=83.76 E-value=1.2 Score=46.45 Aligned_cols=49 Identities=14% Similarity=0.166 Sum_probs=31.9
Q ss_pred ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEe
Q 006372 91 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 91 ~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYS 150 (648)
.+||.||-|.-..-+|.. .-+. .....|..+ .|.=|.+.|++||.+|-=
T Consensus 168 ~k~DLVISDMAPNtTG~~--D~d~------~Rs~~L~El---ALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 168 NKWDLIISDMYDPRTKHV--TKEN------DSKEGFFTY---LCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp SCEEEEEECCCCTTSCSS--CSCC------CCCCTHHHH---HHHHHHHHEEEEEEEEEE
T ss_pred CCCCEEEecCCCCcCCcc--ccch------hHHHHHHHH---HHHHHHHhCcCCCEEEEE
Confidence 679999999888888871 1111 012233333 456677889999998754
No 282
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=83.47 E-value=1.9 Score=42.68 Aligned_cols=52 Identities=21% Similarity=0.307 Sum_probs=42.6
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 66 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p 66 (648)
+||+|.-|..+++. .+.|+|+|+|+.-+..++++++. .+++.+.+.|+..++
T Consensus 38 G~G~G~lt~~l~~~-----------~~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~ 89 (244)
T 1qam_A 38 GSGKGHFTLELVQR-----------CNFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQFK 89 (244)
T ss_dssp CCTTSHHHHHHHHH-----------SSEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGCC
T ss_pred eCCchHHHHHHHHc-----------CCeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhCC
Confidence 68999999998875 25899999999999988877653 368999999987754
No 283
>1sqw_A Saccharomyces cerevisiae NIP7P homolog; PUA, unknown function; 1.90A {Homo sapiens} SCOP: b.122.1.1 d.17.6.3 PDB: 1t5y_A
Probab=83.38 E-value=0.77 Score=44.71 Aligned_cols=121 Identities=20% Similarity=0.255 Sum_probs=76.0
Q ss_pred hhHHHHHhHhcCCCCCCCCCceEeecCCCC-----cceEEEEeCHHHHHHHHhccCCCCccEEEEceeeeEEEecCCCCC
Q 006372 419 TIINSIKTFYGIDDSFQLSGQLVSRNGDTN-----RVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQTSREGN 493 (648)
Q Consensus 419 ~~~~~I~~fYgi~~~Fp~~~~lvtRn~~g~-----~~k~IYyvS~~vk~il~~N~~~g~~LKii~~GvK~F~Rq~~~~~~ 493 (648)
.+++.+..|-|-+ . .+|+.| +++. +.+++||+|+.+.+.+++- .+.+++++|+.+ .+-+. .
T Consensus 11 ~vf~kL~~yiG~n--~---~~li~~-~~~~~~frl~~~rVyyv~~~i~~~a~~i----~r~~l~s~Gtc~-Gkftk-~-- 76 (188)
T 1sqw_A 11 VMFEKIAKYIGEN--L---QLLVDR-PDGTYCFRLHNDRVYYVSEKIMKLAANI----SGDKLVSLGTCF-GKFTK-T-- 76 (188)
T ss_dssp HHHHHHHHHHGGG--T---HHHHEE-TTEEEEEEEETTEEEEEEHHHHHTTTSS----CHHHHHHHSEEE-EEECT-T--
T ss_pred HHHHHHHHHhccC--H---HHHhcC-CCCceEEEecCCEEEEECHHHHHHHhcC----CcCCeeEeeeEE-EEEec-C--
Confidence 3466777776644 2 244444 3332 3589999999999875433 468899999965 44331 2
Q ss_pred CcccceeeccCchhhhhhcccCcEEEcCHHHHHHHhhcCCCCcccCCChHHHHHHhcCCCceEEEEEeC
Q 006372 494 SAPCSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVIVLSK 562 (648)
Q Consensus 494 ~~~c~~RI~qEGl~~l~p~i~kRiv~~~~~dl~~LL~~~~~~~~~~~d~e~~e~~~~l~~Gc~Vl~~~~ 562 (648)
=.||++-+|+.+|.||-..|+ .+..+--..+|-..++.-..+.. .=+++..|--||++..
T Consensus 77 ---gkF~L~It~l~~La~~~~~kV-~Vk~~~E~~flyG~nVfk~~V~~-----i~e~i~~~~~VvV~n~ 136 (188)
T 1sqw_A 77 ---HKFRLHVTALDYLAPYAKYKV-WIKPGAEQSFLYGNHVLKSGLGR-----ITENTSQYQGVVVYSM 136 (188)
T ss_dssp ---SCEEECGGGHHHHGGGCSCEE-EECHHHHHHHTTTCCEEGGGEEE-----ECTTCCTTCEEEEEET
T ss_pred ---CcEEEchhHHHHhhhccCcEE-EECCCceeeEEeccchhHHhhhh-----cCCCCCCCCEEEEEeC
Confidence 389999999999999966554 45544445556555543322211 1124556777777774
No 284
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=82.92 E-value=0.44 Score=50.54 Aligned_cols=94 Identities=11% Similarity=-0.050 Sum_probs=55.1
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEE--eecccccCCCcccCCCCCCCCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIV--TNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~v--tn~Da~~~p~~~~~~~~~~~~~ 79 (648)
.|+.|.-+..+++. ...|+++|.+..-+...++ .+.+.... ...++..+
T Consensus 115 GcG~G~~~~~l~~~-----------g~~v~gvD~s~~~~~~a~~----~~~~~~~~~~~~~~~~~l-------------- 165 (416)
T 4e2x_A 115 GCNDGIMLRTIQEA-----------GVRHLGFEPSSGVAAKARE----KGIRVRTDFFEKATADDV-------------- 165 (416)
T ss_dssp TCTTTTTHHHHHHT-----------TCEEEEECCCHHHHHHHHT----TTCCEECSCCSHHHHHHH--------------
T ss_pred cCCCCHHHHHHHHc-----------CCcEEEECCCHHHHHHHHH----cCCCcceeeechhhHhhc--------------
Confidence 46777766666552 2489999999876655443 24432210 00111110
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
......||.|++- +++-.-++ ...+|..+.++|||||+++.++-.
T Consensus 166 -------~~~~~~fD~I~~~------~vl~h~~d----------------~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 166 -------RRTEGPANVIYAA------NTLCHIPY----------------VQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp -------HHHHCCEEEEEEE------SCGGGCTT----------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -------ccCCCCEEEEEEC------ChHHhcCC----------------HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 0113679999984 22211111 356789999999999999987544
No 285
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=81.71 E-value=1.6 Score=44.54 Aligned_cols=66 Identities=18% Similarity=0.134 Sum_probs=50.7
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
++++|.-|..|++. .+.|+|+|+|+.-+..+++++. ..++.+.+.|+..++.-.
T Consensus 54 G~G~G~lt~~L~~~-----------~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l~~~~~~------------ 107 (271)
T 3fut_A 54 GPGLGALTRALLEA-----------GAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDALLYPWEE------------ 107 (271)
T ss_dssp CCTTSHHHHHHHHT-----------TCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGGGSCGGG------------
T ss_pred eCchHHHHHHHHHc-----------CCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChhhCChhh------------
Confidence 68999999988774 2579999999999998887654 368999999987764210
Q ss_pred cccccccccccccEEEEcCC
Q 006372 82 IESESNMGQLLFDRVLCDVP 101 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvP 101 (648)
...||+|+...|
T Consensus 108 --------~~~~~~iv~NlP 119 (271)
T 3fut_A 108 --------VPQGSLLVANLP 119 (271)
T ss_dssp --------SCTTEEEEEEEC
T ss_pred --------ccCccEEEecCc
Confidence 125799998887
No 286
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=80.93 E-value=2.2 Score=44.67 Aligned_cols=93 Identities=11% Similarity=0.083 Sum_probs=59.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
.+++|..+..+++.. |...+++.|. +.-+.. .++ .+++.+..+|... + +
T Consensus 217 G~G~G~~~~~l~~~~---------~~~~~~~~D~-~~~~~~----a~~--~~~v~~~~~d~~~-~---~----------- 265 (372)
T 1fp1_D 217 GGGSGRNLELIISKY---------PLIKGINFDL-PQVIEN----APP--LSGIEHVGGDMFA-S---V----------- 265 (372)
T ss_dssp TCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHTT----CCC--CTTEEEEECCTTT-C---C-----------
T ss_pred CCCCcHHHHHHHHHC---------CCCeEEEeCh-HHHHHh----hhh--cCCCEEEeCCccc-C---C-----------
Confidence 578898888887763 3467889998 432221 111 2567777776533 1 0
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
..||.|++-- +...|... ...++|.++.+.|||||+|+.+...+
T Consensus 266 ---------~~~D~v~~~~-------------~lh~~~d~-------~~~~~l~~~~~~L~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 266 ---------PQGDAMILKA-------------VCHNWSDE-------KCIEFLSNCHKALSPNGKVIIVEFIL 309 (372)
T ss_dssp ---------CCEEEEEEES-------------SGGGSCHH-------HHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred ---------CCCCEEEEec-------------ccccCCHH-------HHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 1289998721 22234321 12578999999999999999876544
No 287
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=80.40 E-value=4.6 Score=40.98 Aligned_cols=78 Identities=15% Similarity=-0.024 Sum_probs=54.7
Q ss_pred CEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCC
Q 006372 27 NGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG 106 (648)
Q Consensus 27 ~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdG 106 (648)
...++|.|+|..-+..+++++.++| .++.+...|...-+ -...||.||+=
T Consensus 126 ~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~~~~~----------------------~~~~~DvvLll------- 175 (253)
T 3frh_A 126 IASVWGCDIHQGLGDVITPFAREKD-WDFTFALQDVLCAP----------------------PAEAGDLALIF------- 175 (253)
T ss_dssp CSEEEEEESBHHHHHHHHHHHHHTT-CEEEEEECCTTTSC----------------------CCCBCSEEEEE-------
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhcC-CCceEEEeecccCC----------------------CCCCcchHHHH-------
Confidence 5799999999999999999999988 44555555543211 12469999761
Q ss_pred ccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEE
Q 006372 107 TLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIV 148 (648)
Q Consensus 107 tlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LV 148 (648)
..+.-|...|..-+.+.++.|+++|.+|
T Consensus 176 --------------k~lh~LE~q~~~~~~~ll~aL~~~~vvV 203 (253)
T 3frh_A 176 --------------KLLPLLEREQAGSAMALLQSLNTPRMAV 203 (253)
T ss_dssp --------------SCHHHHHHHSTTHHHHHHHHCBCSEEEE
T ss_pred --------------HHHHHhhhhchhhHHHHHHHhcCCCEEE
Confidence 1233455556666668888999976555
No 288
>2p38_A Protein involved in ribosomal biogenesis; two alpha/beta domains, PUA domain, biosynthetic protein; 1.80A {Pyrococcus abyssi}
Probab=79.61 E-value=6.4 Score=37.39 Aligned_cols=135 Identities=15% Similarity=0.092 Sum_probs=85.5
Q ss_pred hhHHHHHhHhcCCCCCCCCCceEeecCCCCcceEEEEeCHHHHHHHHhccCCCCccEEEEceeee--EEEecCCCCCCcc
Q 006372 419 TIINSIKTFYGIDDSFQLSGQLVSRNGDTNRVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKM--FERQTSREGNSAP 496 (648)
Q Consensus 419 ~~~~~I~~fYgi~~~Fp~~~~lvtRn~~g~~~k~IYyvS~~vk~il~~N~~~g~~LKii~~GvK~--F~Rq~~~~~~~~~ 496 (648)
.+++.+..| + . +..+...+.|.. ..+|||++..+.+.++.. +.++++.|+-+ |...+++.
T Consensus 17 ~i~~~L~~y-~-~--~~~~~~~~~~~~----~~~Vy~v~~~~~~~~~~~-----~~~l~s~G~~~Gk~~~~~t~~----- 78 (166)
T 2p38_A 17 LILKEAEKY-G-E--LLHEFFCVVEGK----YRDVYAVNEEVWKIIEDI-----NMRPYSLGTFVGTIRVDENLV----- 78 (166)
T ss_dssp HHHHHHHTT-E-E--ECCCCEEEEESS----SEEEEEECHHHHHHTTTC-----CCCGGGTEEEEEEEEECTTSC-----
T ss_pred HHHHHHHHh-c-C--CCcccEEEEEcc----CcEEEEECcHHHHHhhcc-----CccceEEEEEEEEEEecccCC-----
Confidence 345556554 3 2 223334444553 479999999998875322 46778888543 32222332
Q ss_pred cceeeccCchhhhhhcccCcEEEcCHHHHHHHhhcCCCCcccCCChHHHHHHhcCCCceEEEEEeCCCCCCCCCccccCC
Q 006372 497 CSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVIVLSKGGEALSNPIQIDAS 576 (648)
Q Consensus 497 c~~RI~qEGl~~l~p~i~kRiv~~~~~dl~~LL~~~~~~~~~~~d~e~~e~~~~l~~Gc~Vl~~~~~~~~~~~~~~~~~~ 576 (648)
=.||++-+|+.+| +| .+..|.++..-.+.+|-...+.-+.+.+- . ...|--|+++.. +. .
T Consensus 79 ~kf~pti~~l~~l-~~-~k~kV~V~~~ae~~flyG~dV~k~gI~~~------~-~~~~~~VvV~~~-~~----------~ 138 (166)
T 2p38_A 79 EKFYPNLEFFSLI-KL-EKNYVILGPKASFLFTTGKDAPKEAVREI------K-WQGSKRVVVLND-LG----------D 138 (166)
T ss_dssp EEEEECHHHHTTE-EE-CSSEEEECHHHHHHHHTTCCBCGGGEEEE------E-CSSCSEEEEECT-TS----------C
T ss_pred CeEEEehHHhhhc-cc-cccEEEECCcceEeeecCCCcchhcceEE------e-ecCCCEEEEEEC-CC----------c
Confidence 2799999999999 76 55677788888888887766655444331 1 466777888864 22 2
Q ss_pred eEEEEEe----eccceeeE
Q 006372 577 TIAIGCW----KGRASLSV 591 (648)
Q Consensus 577 ~~~l~~W----kg~~s~~l 591 (648)
.+.+..+ +|+.-.|+
T Consensus 139 pLG~G~a~~s~~gkvv~n~ 157 (166)
T 2p38_A 139 IIGIGLINPKSDRRFIKNL 157 (166)
T ss_dssp EEEEEEECTTCSTTSEEEE
T ss_pred EEEEEEEEECCCCEEEEEc
Confidence 4778888 67654443
No 289
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=78.57 E-value=3.9 Score=42.86 Aligned_cols=94 Identities=11% Similarity=0.109 Sum_probs=58.8
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
.+++|.-+..|++.. |...++++|. +.-+. ..++ .+++.+..+|... | +
T Consensus 211 G~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~----~a~~--~~~v~~~~~d~~~-~---~----------- 259 (368)
T 3reo_A 211 GGGTGAVASMIVAKY---------PSINAINFDL-PHVIQ----DAPA--FSGVEHLGGDMFD-G---V----------- 259 (368)
T ss_dssp TCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHT----TCCC--CTTEEEEECCTTT-C---C-----------
T ss_pred CCCcCHHHHHHHHhC---------CCCEEEEEeh-HHHHH----hhhh--cCCCEEEecCCCC-C---C-----------
Confidence 578888888887763 3567899998 43221 1111 2567777777543 1 0
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
... |.|++-- +...|.... -.++|+++.+.|||||+|+.....+.
T Consensus 260 --------p~~-D~v~~~~-------------vlh~~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 260 --------PKG-DAIFIKW-------------ICHDWSDEH-------CLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp --------CCC-SEEEEES-------------CGGGBCHHH-------HHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred --------CCC-CEEEEec-------------hhhcCCHHH-------HHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 011 7777622 233454322 25789999999999999998776653
No 290
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=77.24 E-value=4.4 Score=42.41 Aligned_cols=94 Identities=13% Similarity=0.164 Sum_probs=58.7
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
++++|.-+..|++.. |...+++.|. +. ++. ..++ .+++.+..+|... |.
T Consensus 209 G~G~G~~~~~l~~~~---------p~~~~~~~D~-~~---~~~-~a~~--~~~v~~~~~D~~~-~~-------------- 257 (364)
T 3p9c_A 209 GGGVGATVAAIAAHY---------PTIKGVNFDL-PH---VIS-EAPQ--FPGVTHVGGDMFK-EV-------------- 257 (364)
T ss_dssp TCTTSHHHHHHHHHC---------TTCEEEEEEC-HH---HHT-TCCC--CTTEEEEECCTTT-CC--------------
T ss_pred CCCCCHHHHHHHHHC---------CCCeEEEecC-HH---HHH-hhhh--cCCeEEEeCCcCC-CC--------------
Confidence 578888888887763 3457889998 33 221 1111 2567777777543 20
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCC
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMN 155 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~ 155 (648)
... |.|++-- +...|...+ -.++|+++.+.|||||+|+.....+.
T Consensus 258 --------p~~-D~v~~~~-------------vlh~~~d~~-------~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 258 --------PSG-DTILMKW-------------ILHDWSDQH-------CATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp --------CCC-SEEEEES-------------CGGGSCHHH-------HHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred --------CCC-CEEEehH-------------HhccCCHHH-------HHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 011 7777621 233454322 25789999999999999988776554
No 291
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=74.80 E-value=5.3 Score=41.28 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=59.3
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
.++.|.-+..+++.. |...+++.|. +.-+... ++ .+++.+..+|... + +
T Consensus 196 G~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a----~~--~~~v~~~~~d~~~-~---~----------- 244 (352)
T 1fp2_A 196 GGGTGTTAKIICETF---------PKLKCIVFDR-PQVVENL----SG--SNNLTYVGGDMFT-S---I----------- 244 (352)
T ss_dssp TCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHTTC----CC--BTTEEEEECCTTT-C---C-----------
T ss_pred CCCccHHHHHHHHHC---------CCCeEEEeeC-HHHHhhc----cc--CCCcEEEeccccC-C---C-----------
Confidence 478888888887753 3467999998 5433221 11 2457777666532 1 0
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhcccc---CcEEEEecccCC
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKV---GGRIVYSTCSMN 155 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~---GG~LVYSTCSl~ 155 (648)
..||.|++-- +...|... ...++|.++.+.||| ||+|+-+.....
T Consensus 245 ---------p~~D~v~~~~-------------~lh~~~d~-------~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 245 ---------PNADAVLLKY-------------ILHNWTDK-------DCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp ---------CCCSEEEEES-------------CGGGSCHH-------HHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred ---------CCccEEEeeh-------------hhccCCHH-------HHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 1389998721 22334321 135789999999999 999988766543
No 292
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=74.20 E-value=2.9 Score=43.13 Aligned_cols=78 Identities=12% Similarity=0.095 Sum_probs=50.7
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCE-EEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNG-MVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G-~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||+.||-+.-+..+ . -.- .|+|+|.|+..+..++.|. +...+.+.|...+....+
T Consensus 22 LFaG~GG~~~g~~~a-G--------~~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~i~~~~i--------- 78 (295)
T 2qrv_A 22 LFDGIATGLLVLKDL-G--------IQVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRSVTQKHI--------- 78 (295)
T ss_dssp ETCTTTHHHHHHHHT-T--------BCEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGGCCHHHH---------
T ss_pred eCcCccHHHHHHHHC-C--------CccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHHccHHHh---------
Confidence 589999998766432 1 122 2799999999999887763 333455666655421100
Q ss_pred cCcccccccccccccEEEEcCCCCCCCccc
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGDGTLR 109 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGdGtlr 109 (648)
.....+|.|+..+||.+--...
T Consensus 79 --------~~~~~~Dll~ggpPCQ~fS~ag 100 (295)
T 2qrv_A 79 --------QEWGPFDLVIGGSPCNDLSIVN 100 (295)
T ss_dssp --------HHTCCCSEEEECCCCGGGBTTC
T ss_pred --------cccCCcCEEEecCCCccccccC
Confidence 0113689999999998765543
No 293
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=73.00 E-value=2.6 Score=44.24 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=50.3
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||+-||-+.-+... . ..--.|+|+|+|+..++..++|. +...+.+.|...+...
T Consensus 9 LFaG~GG~~~G~~~a-G-------~~~~~v~a~e~d~~a~~ty~~N~-----~~~~~~~~DI~~~~~~------------ 63 (333)
T 4h0n_A 9 LYSGIGGMHCAWKES-G-------LDGEIVAAVDINTVANSVYKHNF-----PETNLLNRNIQQLTPQ------------ 63 (333)
T ss_dssp ETCTTTHHHHHHHHH-T-------CSEEEEEEECCCHHHHHHHHHHC-----TTSCEECCCGGGCCHH------------
T ss_pred ECcCccHHHHHHHHc-C-------CCceEEEEEeCCHHHHHHHHHhC-----CCCceeccccccCCHH------------
Confidence 589999998877443 1 01136889999999999988774 2223345554443210
Q ss_pred CcccccccccccccEEEEcCCCCCCCccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLR 109 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlr 109 (648)
......+|.|+..+||.+--...
T Consensus 64 ------~~~~~~~D~l~ggpPCQ~fS~ag 86 (333)
T 4h0n_A 64 ------VIKKWNVDTILMSPPCQPFTRNG 86 (333)
T ss_dssp ------HHHHTTCCEEEECCCCCCSEETT
T ss_pred ------HhccCCCCEEEecCCCcchhhhh
Confidence 01113689999999998765543
No 294
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=72.30 E-value=4 Score=42.26 Aligned_cols=55 Identities=13% Similarity=0.013 Sum_probs=36.8
Q ss_pred ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 91 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 91 ~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
..||.|++|||=-.... ..|...........-..+|..+.++||+||.|+.....
T Consensus 32 ~svDlI~tDPPY~~~~~--------~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 32 ESISLVMTSPPFALQRK--------KEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SCEEEEEECCCCSSSCS--------CSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCeeEEEECCCCCCCcc--------cccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 56999999999532211 02222233344555678888999999999999887654
No 295
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=69.73 E-value=4.9 Score=40.02 Aligned_cols=56 Identities=11% Similarity=0.155 Sum_probs=36.1
Q ss_pred ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 91 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 91 ~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
.+||.|++|||=-. |. .-|..+. ........-..+|..+.++|++||.|+...|..
T Consensus 22 ~~vdlI~~DPPY~~-~~-----~~~d~~~--~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d~ 77 (260)
T 1g60_A 22 KSVQLAVIDPPYNL-SK-----ADWDSFD--SHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPF 77 (260)
T ss_dssp TCEEEEEECCCCSS-CS-----SGGGCCS--SHHHHHHHHHHHHHHHHHHEEEEEEEEEEECHH
T ss_pred cccCEEEECCCCCC-Cc-----ccccccC--CHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCcH
Confidence 46999999999421 11 0122221 223344455677888889999999998877654
No 296
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=69.30 E-value=8.3 Score=39.87 Aligned_cols=93 Identities=18% Similarity=0.183 Sum_probs=58.1
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
.++.|.-+..+++.. |...+++.|. +. ++. ..+. .+++.+..+|... +.
T Consensus 201 G~G~G~~~~~l~~~~---------p~~~~~~~D~-~~---~~~-~a~~--~~~v~~~~~d~~~-~~-------------- 249 (358)
T 1zg3_A 201 GGGTGGVTKLIHEIF---------PHLKCTVFDQ-PQ---VVG-NLTG--NENLNFVGGDMFK-SI-------------- 249 (358)
T ss_dssp TCTTSHHHHHHHHHC---------TTSEEEEEEC-HH---HHS-SCCC--CSSEEEEECCTTT-CC--------------
T ss_pred CCCcCHHHHHHHHHC---------CCCeEEEecc-HH---HHh-hccc--CCCcEEEeCccCC-CC--------------
Confidence 477888888887763 3457889997 42 221 1111 2557777666533 10
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhcccc---CcEEEEecccC
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKV---GGRIVYSTCSM 154 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~---GG~LVYSTCSl 154 (648)
..||.|++-- ++..|... ...++|.++.+.||| ||+|+-....+
T Consensus 250 ---------~~~D~v~~~~-------------vlh~~~d~-------~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 250 ---------PSADAVLLKW-------------VLHDWNDE-------QSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp ---------CCCSEEEEES-------------CGGGSCHH-------HHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred ---------CCceEEEEcc-------------cccCCCHH-------HHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 2389999732 22334321 235789999999999 99988876654
No 297
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=65.80 E-value=4.8 Score=40.12 Aligned_cols=51 Identities=27% Similarity=0.292 Sum_probs=39.3
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 66 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p 66 (648)
++++|.-|..|++. +.+.|+|+|+|+.-+..++++ +..++.+.+.|+..++
T Consensus 39 G~G~G~lt~~L~~~----------~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~ 89 (249)
T 3ftd_A 39 GGGTGNLTKVLLQH----------PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFP 89 (249)
T ss_dssp ESCHHHHHHHHTTS----------CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCC
T ss_pred cCchHHHHHHHHHc----------CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCC
Confidence 57788888777542 236899999999988888765 4568999999987764
No 298
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=64.85 E-value=6.9 Score=44.31 Aligned_cols=59 Identities=20% Similarity=0.233 Sum_probs=44.5
Q ss_pred ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccHHHHHHHHHhC
Q 006372 91 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKC 170 (648)
Q Consensus 91 ~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENEaVV~~~L~~~ 170 (648)
..||.|++|+- .-.|||++|. ..++.+.++++++||++...||. ..|...|.+.
T Consensus 178 ~~~d~~~~D~f-----~p~~np~~w~--------------~~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~L~~a 231 (676)
T 3ps9_A 178 QKVDAWFLDGF-----APAKNPDMWT--------------QNLFNAMARLARPGGTLATFTSA-------GFVRRGLQDA 231 (676)
T ss_dssp TCEEEEEECCS-----CGGGCGGGSC--------------HHHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHH
T ss_pred CcccEEEECCC-----CCcCChhhhh--------------HHHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhC
Confidence 46999999985 2368999875 35677778899999987766665 5788888887
Q ss_pred CCceE
Q 006372 171 EGSVE 175 (648)
Q Consensus 171 ~g~ve 175 (648)
+-.++
T Consensus 232 Gf~v~ 236 (676)
T 3ps9_A 232 GFTMQ 236 (676)
T ss_dssp TCEEE
T ss_pred CeEEE
Confidence 64444
No 299
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=63.31 E-value=8.2 Score=39.38 Aligned_cols=74 Identities=8% Similarity=0.053 Sum_probs=50.4
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||+-||-+.-+-++ +=-.|.|+|.|+..++.+++|. +. .+.+.|-..+..
T Consensus 6 LFsG~GG~~~G~~~a----------G~~~v~a~e~d~~a~~ty~~N~-----~~-~~~~~DI~~i~~------------- 56 (331)
T 3ubt_Y 6 LFSGAGGLDLGFQKA----------GFRIICANEYDKSIWKTYESNH-----SA-KLIKGDISKISS------------- 56 (331)
T ss_dssp ESCTTCHHHHHHHHT----------TCEEEEEEECCTTTHHHHHHHC-----CS-EEEESCGGGCCG-------------
T ss_pred eCcCccHHHHHHHHC----------CCEEEEEEeCCHHHHHHHHHHC-----CC-CcccCChhhCCH-------------
Confidence 589999998766332 1237889999999999998773 22 344566544321
Q ss_pred CcccccccccccccEEEEcCCCCCCCcccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRK 110 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk 110 (648)
.....+|.|+.-+||.+--+..+
T Consensus 57 -------~~~~~~D~l~ggpPCQ~fS~ag~ 79 (331)
T 3ubt_Y 57 -------DEFPKCDGIIGGPPSQSWSEGGS 79 (331)
T ss_dssp -------GGSCCCSEEECCCCGGGTEETTE
T ss_pred -------hhCCcccEEEecCCCCCcCCCCC
Confidence 11246899999999988765543
No 300
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=62.99 E-value=14 Score=42.23 Aligned_cols=97 Identities=12% Similarity=0.119 Sum_probs=65.3
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCC-cEEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCC
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTA-NLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDG 106 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~-nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdG 106 (648)
-.|+|+|.++.-.. ..+..++.+.. .|.|++.|...+. + ..++|.|+-.-= |
T Consensus 386 vkVyAVEknp~A~~-a~~~v~~N~~~dkVtVI~gd~eev~---L-------------------PEKVDIIVSEwM----G 438 (637)
T 4gqb_A 386 IKLYAVEKNPNAVV-TLENWQFEEWGSQVTVVSSDMREWV---A-------------------PEKADIIVSELL----G 438 (637)
T ss_dssp EEEEEEESCHHHHH-HHHHHHHHTTGGGEEEEESCTTTCC---C-------------------SSCEEEEECCCC----B
T ss_pred cEEEEEECCHHHHH-HHHHHHhccCCCeEEEEeCcceecc---C-------------------CcccCEEEEEcC----c
Confidence 47999999986444 44456777764 5889988876641 1 257898886543 1
Q ss_pred ccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC--CccccHHHHHHHH
Q 006372 107 TLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM--NPVENEAVVAEIL 167 (648)
Q Consensus 107 tlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl--~p~ENEaVV~~~L 167 (648)
.+- ..++ -..+|..+-++|||||+++=+.|++ .|++.+..-....
T Consensus 439 ~fL-------------l~E~---mlevL~Ardr~LKPgGimiPs~atlyiapi~~~~l~~e~~ 485 (637)
T 4gqb_A 439 SFA-------------DNEL---SPECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYNEVR 485 (637)
T ss_dssp TTB-------------GGGC---HHHHHHHHGGGEEEEEEEESCEEEEEEEEEECHHHHHHHH
T ss_pred ccc-------------cccC---CHHHHHHHHHhcCCCcEEccccceEEEEEecCHHHHHHHH
Confidence 110 1111 1356788889999999999888884 4888887655543
No 301
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=62.87 E-value=8 Score=44.83 Aligned_cols=104 Identities=13% Similarity=0.120 Sum_probs=70.9
Q ss_pred CEEEEEEcCChHHHHHHHHHHHHhCCCc-EEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCC
Q 006372 27 NGMVIANDLDVQRCNLLIHQTKRMCTAN-LIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGD 105 (648)
Q Consensus 27 ~G~ViAnD~d~kR~~~L~~~lkRlg~~n-v~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGd 105 (648)
...|+|+|.++.-...|+...+ .|..+ |.|+..|...+.. .. ......++|.|+-.--
T Consensus 446 ~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~l-p~---------------~~~~~ekVDIIVSElm---- 504 (745)
T 3ua3_A 446 KVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPG-IA---------------KDRGFEQPDIIVSELL---- 504 (745)
T ss_dssp EEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHH-HH---------------HHTTCCCCSEEEECCC----
T ss_pred ccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccc-cc---------------ccCCCCcccEEEEecc----
Confidence 4699999999877766766554 56544 8889888776421 00 0001367899987543
Q ss_pred CccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc--CCccccHHHHHHHH
Q 006372 106 GTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS--MNPVENEAVVAEIL 167 (648)
Q Consensus 106 Gtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS--l~p~ENEaVV~~~L 167 (648)
|.+ .+..++-++|..+-++|||||+++=+.|+ +.|++....-..+.
T Consensus 505 Gsf----------------l~nEL~pe~Ld~v~r~Lkp~Gi~iP~~~t~ylaPi~~~~l~~~v~ 552 (745)
T 3ua3_A 505 GSF----------------GDNELSPECLDGVTGFLKPTTISIPQKYTSYVKPIMSTHIHQTIK 552 (745)
T ss_dssp BTT----------------BGGGSHHHHHHTTGGGSCTTCEEESCEEEEEEEEEECHHHHHHHH
T ss_pred ccc----------------cchhccHHHHHHHHHhCCCCcEEECCccEEEEEEecCHHHHHHHH
Confidence 221 12345566788888999999999988887 66899988766554
No 302
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=62.63 E-value=9.2 Score=34.82 Aligned_cols=20 Identities=20% Similarity=0.343 Sum_probs=17.7
Q ss_pred HHHHHHHhhccccCcEEEEe
Q 006372 131 VQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 131 ~~IL~~Al~lLk~GG~LVYS 150 (648)
.++|.++.+.|||||+++.+
T Consensus 81 ~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 81 AEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEE
Confidence 46799999999999999984
No 303
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=61.76 E-value=5.1 Score=41.88 Aligned_cols=73 Identities=11% Similarity=0.085 Sum_probs=47.0
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEE-EEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMV-IANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASD 79 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~V-iAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~ 79 (648)
+||+-||-+.-+..+ . ..--.| +|+|+|+..++..++|.. .. +.+.|-..+...
T Consensus 16 LFaG~GG~~~G~~~a-G-------~~~~~v~~a~e~d~~a~~ty~~N~~---~~---~~~~DI~~~~~~----------- 70 (327)
T 3qv2_A 16 FFSGIGGLRSSYERS-S-------ININATFIPFDINEIANKIYSKNFK---EE---VQVKNLDSISIK----------- 70 (327)
T ss_dssp ETCTTTHHHHHHHHS-S-------CCCCEEEEEECCCHHHHHHHHHHHC---CC---CBCCCTTTCCHH-----------
T ss_pred ECCChhHHHHHHHHc-C-------CCceEEEEEEECCHHHHHHHHHHCC---CC---cccCChhhcCHH-----------
Confidence 589999998776432 0 001256 799999999999988852 11 334454332110
Q ss_pred cCcccccccccccccEEEEcCCCCCC
Q 006372 80 KGIESESNMGQLLFDRVLCDVPCSGD 105 (648)
Q Consensus 80 ~~~~~~~~~~~~~FDrILlDvPCSGd 105 (648)
......+|.|+..+||.+-
T Consensus 71 -------~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 71 -------QIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp -------HHHHTCCCEEEECCCCTTC
T ss_pred -------HhccCCCCEEEecCCccCc
Confidence 0111268999999999987
No 304
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=61.19 E-value=19 Score=36.88 Aligned_cols=25 Identities=8% Similarity=-0.082 Sum_probs=19.0
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCcEE
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTANLI 56 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~nv~ 56 (648)
..|++.|.+..|++.+ +++|...+.
T Consensus 201 a~Vi~~~~~~~~~~~~----~~lGa~~v~ 225 (348)
T 3two_A 201 AEVSVFARNEHKKQDA----LSMGVKHFY 225 (348)
T ss_dssp CEEEEECSSSTTHHHH----HHTTCSEEE
T ss_pred CeEEEEeCCHHHHHHH----HhcCCCeec
Confidence 3799999999998866 458876543
No 305
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=60.88 E-value=7 Score=39.79 Aligned_cols=54 Identities=19% Similarity=0.142 Sum_probs=43.0
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 66 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p 66 (648)
++++|.-|..|++.... ..+.|+|+|+|+.-+..++++. ..++.+++.|+..++
T Consensus 50 G~G~G~lt~~La~~~~~-------~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~ 103 (279)
T 3uzu_A 50 GPGLGALTGPVIARLAT-------PGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFD 103 (279)
T ss_dssp CCTTSTTHHHHHHHHCB-------TTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCC
T ss_pred ccccHHHHHHHHHhCCC-------cCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCC
Confidence 68999999999886421 0256999999999999998772 468999999998765
No 306
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=59.74 E-value=11 Score=42.91 Aligned_cols=60 Identities=22% Similarity=0.205 Sum_probs=44.2
Q ss_pred ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccHHHHHHHHHhC
Q 006372 91 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKC 170 (648)
Q Consensus 91 ~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENEaVV~~~L~~~ 170 (648)
..||.|++|+.. -.|||++|. ..++...++++++||++..-||. ..|...|.+.
T Consensus 170 ~~~da~flD~f~-----p~~np~~w~--------------~~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~l~~a 223 (689)
T 3pvc_A 170 NQVDAWFLDGFA-----PAKNPDMWN--------------EQLFNAMARMTRPGGTFSTFTAA-------GFVRRGLQQA 223 (689)
T ss_dssp TCEEEEEECSSC-----C--CCTTCS--------------HHHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHHT
T ss_pred CceeEEEECCCC-----CCCChhhhh--------------HHHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHhC
Confidence 469999999852 358999874 34667778899999998877776 5788888887
Q ss_pred CCceEE
Q 006372 171 EGSVEL 176 (648)
Q Consensus 171 ~g~veL 176 (648)
+..+.-
T Consensus 224 Gf~~~~ 229 (689)
T 3pvc_A 224 GFNVTK 229 (689)
T ss_dssp TCEEEE
T ss_pred CeEEEe
Confidence 755443
No 307
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=59.13 E-value=10 Score=39.49 Aligned_cols=37 Identities=19% Similarity=0.166 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 6 GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 6 GgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
|.-+.|+|..+. ...|++.|.+..|++.+ +++|...+
T Consensus 185 G~~a~qlak~~~---------g~~Vi~~~~~~~~~~~~----~~lGad~v 221 (363)
T 4dvj_A 185 GSIAVQIARQRT---------DLTVIATASRPETQEWV----KSLGAHHV 221 (363)
T ss_dssp HHHHHHHHHHHC---------CSEEEEECSSHHHHHHH----HHTTCSEE
T ss_pred HHHHHHHHHHhc---------CCEEEEEeCCHHHHHHH----HHcCCCEE
Confidence 444556655432 24899999999998876 45887543
No 308
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=58.75 E-value=8.9 Score=39.43 Aligned_cols=70 Identities=17% Similarity=0.136 Sum_probs=48.1
Q ss_pred cccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccHHHHHHHHHh
Q 006372 90 QLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 169 (648)
Q Consensus 90 ~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENEaVV~~~L~~ 169 (648)
..+||.|+|++. |=.|+-. -+.-..-+..-..|-..|+..|+|||.+|-..=-+--.-.|.||.++-++
T Consensus 209 ~grYDlVfvNv~-----TpyR~HH------YQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARk 277 (324)
T 3trk_A 209 LGRYDLVVINIH-----TPFRIHH------YQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRK 277 (324)
T ss_dssp GCCEEEEEEECC-----CCCCSSH------HHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTT
T ss_pred CCceeEEEEecC-----Cccccch------HHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhh
Confidence 368999999985 2222111 01111111222345678999999999999999999999999999988876
Q ss_pred C
Q 006372 170 C 170 (648)
Q Consensus 170 ~ 170 (648)
+
T Consensus 278 F 278 (324)
T 3trk_A 278 F 278 (324)
T ss_dssp E
T ss_pred h
Confidence 5
No 309
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=58.13 E-value=28 Score=33.86 Aligned_cols=124 Identities=8% Similarity=-0.023 Sum_probs=64.7
Q ss_pred HHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCcccccc
Q 006372 8 KTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESN 87 (648)
Q Consensus 8 KT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~ 87 (648)
--.+++..|... ...|++.+.+.+....+.+..+.++..++.+...|..+...+.- ......
T Consensus 21 IG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~-----------~~~~~~ 82 (266)
T 3oig_A 21 IAWGIARSLHEA-------GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIET-----------CFASIK 82 (266)
T ss_dssp HHHHHHHHHHHT-------TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHH-----------HHHHHH
T ss_pred HHHHHHHHHHHC-------CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHH-----------HHHHHH
Confidence 566666666542 24688889888777777777777766566777666554321100 000000
Q ss_pred cccccccEEEEcCCCCCCCccccCcccccccCcchhhh----hHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 88 MGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNG----LHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 88 ~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~----L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
.....+|.++.-+--+..+.... .+...+...... ...-...++..++.+++.+|+||+.+.
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVG---EYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSS---CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHhCCeeEEEEcccccccccccc---chhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 11235788877654333110000 000111111111 112234567788888888899888653
No 310
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=54.60 E-value=45 Score=31.94 Aligned_cols=129 Identities=11% Similarity=0.028 Sum_probs=67.6
Q ss_pred ccchHHHHHHHHHHhc-CCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 3 AAPGSKTFQLLEIIHQ-STNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 3 AAPGgKT~qlae~l~~-~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
-|.||--.+++..|.. . ...|++.+.+..++..+...++..+. ++.+...|......+. .
T Consensus 11 GasggIG~~~a~~L~~~~-------g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~--~--------- 71 (276)
T 1wma_A 11 GGNKGIGLAIVRDLCRLF-------SGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIR--A--------- 71 (276)
T ss_dssp SCSSHHHHHHHHHHHHHS-------SSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHH--H---------
T ss_pred CCCcHHHHHHHHHHHHhc-------CCeEEEEeCChHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHH--H---------
Confidence 3567777888877764 2 24788999999888888777776653 3455555544321110 0
Q ss_pred cccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 82 IESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
...........+|.|+.-+-....+..... ....|.. ....-..-...++..+++.++.+|+|||.+..
T Consensus 72 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~--~~~~~~~-~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~ 140 (276)
T 1wma_A 72 LRDFLRKEYGGLDVLVNNAGIAFKVADPTP--FHIQAEV-TMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI 140 (276)
T ss_dssp HHHHHHHHHSSEEEEEECCCCCCCTTCCSC--HHHHHHH-HHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred HHHHHHHhcCCCCEEEECCcccccCCCccc--cHHHHHh-hhheeeeeHHHHHHHHHHhhCCCCEEEEECCh
Confidence 000000011257888765533222211000 0011111 01111122356777888888878999987653
No 311
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=54.40 E-value=11 Score=38.98 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=33.4
Q ss_pred ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccC
Q 006372 91 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSM 154 (648)
Q Consensus 91 ~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl 154 (648)
..||.|++|||=-. | .+.|. ........-...|..+.++|++||.|+.. |+-
T Consensus 57 ~svDlI~tDPPY~~-~-----~d~~~-----~~~~~~~~~~~~l~~~~rvLk~~G~i~i~-~~~ 108 (319)
T 1eg2_A 57 DSVQLIICDPPYNI-M-----LADWD-----DHMDYIGWAKRWLAEAERVLSPTGSIAIF-GGL 108 (319)
T ss_dssp TCEEEEEECCCSBC-C-----GGGGG-----TCSSHHHHHHHHHHHHHHHEEEEEEEEEE-ECS
T ss_pred CCcCEEEECCCCCC-C-----CCCcc-----CHHHHHHHHHHHHHHHHHHcCCCeEEEEE-cCc
Confidence 46999999999421 1 12222 12233444567777889999999988775 443
No 312
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=54.16 E-value=9.5 Score=38.70 Aligned_cols=60 Identities=15% Similarity=0.075 Sum_probs=32.9
Q ss_pred ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 91 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 91 ~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
..||.|++|||=-........+..+.. .............++..+.++||+||.|+....
T Consensus 39 ~s~DlIvtdPPY~~~~~y~~~~~~~~~--~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 39 ASVHLVVTSPPYWTLKRYEDTPGQLGH--IEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp TCEEEEEECCCCCCCC-------CCHH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CceeEEEECCCCCCccccCCChhhhcc--cccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 579999999995322211111111000 001111222345688999999999999877654
No 313
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=53.39 E-value=19 Score=37.54 Aligned_cols=24 Identities=13% Similarity=0.122 Sum_probs=18.4
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
..|++.|.+..|++++ +++|...+
T Consensus 208 ~~Vi~~~~~~~~~~~a----~~lGa~~v 231 (370)
T 4ej6_A 208 TTVILSTRQATKRRLA----EEVGATAT 231 (370)
T ss_dssp SEEEEECSCHHHHHHH----HHHTCSEE
T ss_pred CEEEEECCCHHHHHHH----HHcCCCEE
Confidence 3899999999998865 45787643
No 314
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=52.28 E-value=23 Score=35.69 Aligned_cols=23 Identities=13% Similarity=0.013 Sum_probs=18.2
Q ss_pred EEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 29 MVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 29 ~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
.|++.+.+..|++.++ ++|...+
T Consensus 173 ~Vi~~~~~~~~~~~~~----~lGa~~v 195 (324)
T 3nx4_A 173 QVAAVSGRESTHGYLK----SLGANRI 195 (324)
T ss_dssp CEEEEESCGGGHHHHH----HHTCSEE
T ss_pred EEEEEeCCHHHHHHHH----hcCCCEE
Confidence 7999999999988774 4786644
No 315
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=50.87 E-value=12 Score=38.95 Aligned_cols=76 Identities=13% Similarity=0.173 Sum_probs=45.6
Q ss_pred ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccHHHHHHHHHhC
Q 006372 91 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKC 170 (648)
Q Consensus 91 ~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENEaVV~~~L~~~ 170 (648)
.++|.||+|.-=.-.|+ ++. +=......+|. ++.-|+..|+|||.+|--.=-.--..-|.++..+.+.+
T Consensus 205 ~k~DvV~SDMApn~sGh---------~yq-QC~DHarii~L-al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F 273 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYH---------HYQ-QCEDHAIKLSM-LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQF 273 (320)
T ss_dssp CCEEEEEEECCCCCCSC---------HHH-HHHHHHHHHHH-THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTE
T ss_pred CcCCEEEEcCCCCCCCc---------ccc-ccchHHHHHHH-HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhc
Confidence 56999999986444443 111 00112223344 89999999999999986655554334566666655543
Q ss_pred CCceEEEe
Q 006372 171 EGSVELVD 178 (648)
Q Consensus 171 ~g~veLvd 178 (648)
..+..+.
T Consensus 274 -~~Vr~vK 280 (320)
T 2hwk_A 274 -KFSRVCK 280 (320)
T ss_dssp -EEEEEEC
T ss_pred -ceeeeeC
Confidence 2455544
No 316
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=50.71 E-value=12 Score=38.65 Aligned_cols=73 Identities=14% Similarity=0.154 Sum_probs=43.2
Q ss_pred EEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCcccccccccccccEEEEcCCCCCCCcc
Q 006372 29 MVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTL 108 (648)
Q Consensus 29 ~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtl 108 (648)
.|++.|.+.+|++++ +++|...+ ++.....+... + .. ......||.|| | |+|..
T Consensus 193 ~Vi~~~~~~~~~~~~----~~lGa~~v--i~~~~~~~~~~-v------------~~--~t~g~g~D~v~-d--~~g~~-- 246 (352)
T 3fpc_A 193 RIFAVGSRKHCCDIA----LEYGATDI--INYKNGDIVEQ-I------------LK--ATDGKGVDKVV-I--AGGDV-- 246 (352)
T ss_dssp SEEEECCCHHHHHHH----HHHTCCEE--ECGGGSCHHHH-H------------HH--HTTTCCEEEEE-E--CSSCT--
T ss_pred EEEEECCCHHHHHHH----HHhCCceE--EcCCCcCHHHH-H------------HH--HcCCCCCCEEE-E--CCCCh--
Confidence 699999999998866 45786533 33322221100 0 00 00113589886 4 44442
Q ss_pred ccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEe
Q 006372 109 RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 109 rk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYS 150 (648)
..+..++++|++||++|..
T Consensus 247 -----------------------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 247 -----------------------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp -----------------------THHHHHHHHEEEEEEEEEC
T ss_pred -----------------------HHHHHHHHHHhcCCEEEEe
Confidence 1367789999999998854
No 317
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=49.82 E-value=19 Score=36.83 Aligned_cols=37 Identities=30% Similarity=0.373 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 6 GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 6 GgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
|.-+.|++..+. ...|++.|.+..|++++ +++|...+
T Consensus 184 G~~a~qla~~~g---------~~~Vi~~~~~~~~~~~~----~~lGa~~~ 220 (345)
T 3jv7_A 184 GHVGIQILRAVS---------AARVIAVDLDDDRLALA----REVGADAA 220 (345)
T ss_dssp HHHHHHHHHHHC---------CCEEEEEESCHHHHHHH----HHTTCSEE
T ss_pred HHHHHHHHHHcC---------CCEEEEEcCCHHHHHHH----HHcCCCEE
Confidence 445666666542 25899999999999866 46887644
No 318
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=48.36 E-value=36 Score=35.50 Aligned_cols=28 Identities=7% Similarity=-0.110 Sum_probs=20.5
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChH
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQ 38 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~k 38 (648)
-|||||.|-.++..- +...|+|+|+-..
T Consensus 102 GaapGGwsq~~~~~~---------gv~~V~avdvG~~ 129 (321)
T 3lkz_A 102 GCGRGGWCYYMATQK---------RVQEVRGYTKGGP 129 (321)
T ss_dssp TCTTCHHHHHHTTCT---------TEEEEEEECCCST
T ss_pred CCCCCcHHHHHHhhc---------CCCEEEEEEcCCC
Confidence 389999998775542 2348999998654
No 319
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=47.79 E-value=19 Score=36.65 Aligned_cols=25 Identities=28% Similarity=0.364 Sum_probs=18.9
Q ss_pred CEEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 27 NGMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 27 ~G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
...|++.|.+..|+.++ +++|...+
T Consensus 188 g~~Vi~~~~~~~r~~~~----~~~Ga~~~ 212 (348)
T 4eez_A 188 GAKVIAVDINQDKLNLA----KKIGADVT 212 (348)
T ss_dssp CCEEEEEESCHHHHHHH----HHTTCSEE
T ss_pred CCEEEEEECcHHHhhhh----hhcCCeEE
Confidence 35899999999998754 56777543
No 320
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=47.52 E-value=72 Score=31.12 Aligned_cols=125 Identities=6% Similarity=-0.014 Sum_probs=67.1
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCC------------hHHHHHHHHHHHHhCCCcEEEeecccccCCCcccC
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLD------------VQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRAN 71 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d------------~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~ 71 (648)
|.||--.+++..|... ...|+.+|.+ ..++..+...+...+. ++.+...|..+...+.
T Consensus 18 as~gIG~~ia~~l~~~-------G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~-- 87 (287)
T 3pxx_A 18 GARGQGRSHAVKLAEE-------GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRDRAAVS-- 87 (287)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHH--
T ss_pred CCChHHHHHHHHHHHC-------CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHH--
Confidence 5567777788777652 2478888887 7777777777776653 4555555644321110
Q ss_pred CCCCCCCCcCcccccccccccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 72 KNFSSASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
. ............|.++.-+--...+ ....++-|.+ . ..--..-...+++.++.+++.+|+||+.+
T Consensus 88 ~---------~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~---~-~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 88 R---------ELANAVAEFGKLDVVVANAGICPLG-AHLPVQAFAD---A-FDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp H---------HHHHHHHHHSCCCEEEECCCCCCCC-TTCCTHHHHH---H-HHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred H---------HHHHHHHHcCCCCEEEECCCcCccc-CcCCHHHHHH---H-hhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 0 0000001123678888765433333 1112222221 1 11111223556778888888899999865
Q ss_pred c
Q 006372 152 C 152 (648)
Q Consensus 152 C 152 (648)
.
T Consensus 154 S 154 (287)
T 3pxx_A 154 S 154 (287)
T ss_dssp C
T ss_pred c
Confidence 4
No 321
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=47.29 E-value=32 Score=33.81 Aligned_cols=125 Identities=12% Similarity=0.050 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCccccc
Q 006372 7 SKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESES 86 (648)
Q Consensus 7 gKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~ 86 (648)
|--..++..|... ...|+.+|.+..+++.+.+.++.++...+.....|-++...+. ......
T Consensus 19 GIG~aiA~~la~~-------Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-----------~~~~~~ 80 (256)
T 4fs3_A 19 SIAFGVAKVLDQL-------GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVI-----------NGFEQI 80 (256)
T ss_dssp CHHHHHHHHHHHT-------TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHH-----------HHHHHH
T ss_pred hHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHH-----------HHHHHH
Confidence 4555666666542 2479999999999999998888888766666666654321110 000001
Q ss_pred ccccccccEEEEcCCCCCCCccccC-ccc-ccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEe
Q 006372 87 NMGQLLFDRVLCDVPCSGDGTLRKA-PDI-WRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYS 150 (648)
Q Consensus 87 ~~~~~~FDrILlDvPCSGdGtlrk~-p~i-~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYS 150 (648)
.......|.++.-+--++...+... .+. |..|....-.++. ....+...++.+.+.||+||..
T Consensus 81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~-~~~~~~~~~~~~~~~~G~IVni 145 (256)
T 4fs3_A 81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSY-SLTIVAHEAKKLMPEGGSIVAT 145 (256)
T ss_dssp HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTH-HHHHHHHHHHTTCTTCEEEEEE
T ss_pred HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHH-HHHHHHHHHHHHhccCCEEEEE
Confidence 1123467877766543332222111 121 2223211111111 1233455667788889998864
No 322
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=46.98 E-value=16 Score=40.60 Aligned_cols=53 Identities=9% Similarity=0.033 Sum_probs=38.6
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHF 65 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~ 65 (648)
.|+.|--|..||.+ ...|+++|.+..-+...+...+..|..++...+.++..+
T Consensus 74 GCG~G~~~~~la~~-----------ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~ 126 (569)
T 4azs_A 74 GCAQGFFSLSLASK-----------GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEV 126 (569)
T ss_dssp TCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHH
T ss_pred CCCCcHHHHHHHhC-----------CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHH
Confidence 46777767776653 358999999999888887777666656677777666543
No 323
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=46.42 E-value=11 Score=41.47 Aligned_cols=93 Identities=11% Similarity=0.076 Sum_probs=49.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||+.||-+.-+..+ +--.|+|+|.|+..++.+++|.. ..+...+.+.|...+.......... .
T Consensus 94 LFaG~GGlslG~~~a----------G~~~v~avE~d~~A~~ty~~N~~--~~p~~~~~~~DI~~i~~~~~~~~~~----~ 157 (482)
T 3me5_A 94 LFAGIGGIRRGFESI----------GGQCVFTSEWNKHAVRTYKANHY--CDPATHHFNEDIRDITLSHQEGVSD----E 157 (482)
T ss_dssp ESCTTSHHHHHHHTT----------TEEEEEEECCCHHHHHHHHHHSC--CCTTTCEEESCTHHHHCTTCTTSCH----H
T ss_pred ecCCccHHHHHHHHC----------CCEEEEEEeCCHHHHHHHHHhcc--cCCCcceeccchhhhhhccccccch----h
Confidence 589999988766321 12368999999999999887641 1133344556654432100000000 0
Q ss_pred CcccccccccccccEEEEcCCCCCCCccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLR 109 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlr 109 (648)
............+|.|+..+||-+--...
T Consensus 158 ~~~~~i~~~~~~~Dvl~gGpPCQ~FS~AG 186 (482)
T 3me5_A 158 AAAEHIRQHIPEHDVLLAGFPCQPFSLAG 186 (482)
T ss_dssp HHHHHHHHHSCCCSEEEEECCCCCC----
T ss_pred hHHhhhhhcCCCCCEEEecCCCcchhhhC
Confidence 00000001124689999999998776554
No 324
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=46.00 E-value=25 Score=35.76 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 6 GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 6 GgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
|+-+.|+|..+. ...+++.|.+.+|++++ +++|...+
T Consensus 173 G~~aiq~ak~~G---------~~~vi~~~~~~~k~~~a----~~lGa~~~ 209 (346)
T 4a2c_A 173 GLLAIQCAVALG---------AKSVTAIDISSEKLALA----KSFGAMQT 209 (346)
T ss_dssp HHHHHHHHHHTT---------CSEEEEEESCHHHHHHH----HHTTCSEE
T ss_pred chHHHHHHHHcC---------CcEEEEEechHHHHHHH----HHcCCeEE
Confidence 444555555532 34789999999998865 56887643
No 325
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=43.82 E-value=54 Score=31.76 Aligned_cols=51 Identities=8% Similarity=-0.051 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 7 SKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 7 gKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|--.+++..|... ...|++.+.+..++..+...++..+..++.+...|..+
T Consensus 34 GIG~~~a~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~ 84 (266)
T 3o38_A 34 GIGSTTARRALLE-------GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS 84 (266)
T ss_dssp SHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC
T ss_pred chHHHHHHHHHHC-------CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC
Confidence 4556666666542 24789999999999998888877766677777777554
No 326
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=42.75 E-value=49 Score=32.21 Aligned_cols=53 Identities=9% Similarity=0.100 Sum_probs=37.0
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.|.+..++..+.+.++..+. .+.....|..+
T Consensus 20 as~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d 72 (256)
T 3gaf_A 20 AAAGIGRAIAGTFAKA-------GASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTD 72 (256)
T ss_dssp CSSHHHHHHHHHHHHH-------TCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCCHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 5567777777766542 24789999999999998888877764 45555555443
No 327
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=42.50 E-value=32 Score=35.02 Aligned_cols=36 Identities=25% Similarity=0.248 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 6 GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 6 GgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
|.-+.|++..+. ..|++.|.+..|++.+ +++|...+
T Consensus 179 G~~a~qla~~~G----------a~Vi~~~~~~~~~~~~----~~lGa~~~ 214 (340)
T 3s2e_A 179 GHVAVQYARAMG----------LRVAAVDIDDAKLNLA----RRLGAEVA 214 (340)
T ss_dssp HHHHHHHHHHTT----------CEEEEEESCHHHHHHH----HHTTCSEE
T ss_pred HHHHHHHHHHCC----------CeEEEEeCCHHHHHHH----HHcCCCEE
Confidence 555666666532 3899999999998865 55886543
No 328
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=41.97 E-value=17 Score=37.39 Aligned_cols=24 Identities=13% Similarity=-0.011 Sum_probs=18.3
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
..|++.+.+..|++.++ ++|...+
T Consensus 176 a~Vi~~~~~~~~~~~~~----~lGa~~v 199 (346)
T 3fbg_A 176 LRVITTASRNETIEWTK----KMGADIV 199 (346)
T ss_dssp CEEEEECCSHHHHHHHH----HHTCSEE
T ss_pred CEEEEEeCCHHHHHHHH----hcCCcEE
Confidence 48999999999988765 4776533
No 329
>1gwm_A NCP1, non-catalytic protein 1; carbohydrate binding domain, glucomannan, cellohexaose, mannohexaose, cellulosome; HET: GLC BGC; 1.15A {Piromyces equi} SCOP: b.18.1.19 PDB: 1gwk_A* 1gwl_A* 1w90_A 1w8t_A* 1w8u_A* 1w8w_A 1w8z_A 1w9f_A 1oh3_A*
Probab=41.47 E-value=20 Score=32.38 Aligned_cols=18 Identities=44% Similarity=0.680 Sum_probs=14.2
Q ss_pred cccccEEE-EcCCCCCCCc
Q 006372 90 QLLFDRVL-CDVPCSGDGT 107 (648)
Q Consensus 90 ~~~FDrIL-lDvPCSGdGt 107 (648)
...||||. -|+|-||+..
T Consensus 107 ~~~FDRI~~QD~P~~~~~I 125 (153)
T 1gwm_A 107 DLPFDRIDFQDAPGNGDRI 125 (153)
T ss_dssp SSCBCEEEEEETTCSCCCE
T ss_pred cccccEEEEecCCCCCCeE
Confidence 36799987 4999888874
No 330
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=41.35 E-value=28 Score=39.28 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=49.1
Q ss_pred ccccEEEEcCCCCCCCccccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecccCCccccHHHHHHHHHhC
Q 006372 91 LLFDRVLCDVPCSGDGTLRKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKC 170 (648)
Q Consensus 91 ~~FDrILlDvPCSGdGtlrk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENEaVV~~~L~~~ 170 (648)
.+||.|++++. |-.|+-. -..-..-+-.-..|-..|+.+|+|||.+|--.=-+--.-.|.||.++-+++
T Consensus 220 ~ryDlvfvn~~-----t~yr~HH------yqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF 288 (670)
T 4gua_A 220 ARYDLVFINIG-----TKYRNHH------FQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKF 288 (670)
T ss_dssp CCEEEEEECCC-----CCCCSCH------HHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTE
T ss_pred CcccEEEEecC-----CCcccch------HHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhhe
Confidence 58999999875 2111111 011111111223456789999999999999999999999999999988875
Q ss_pred CCceEE
Q 006372 171 EGSVEL 176 (648)
Q Consensus 171 ~g~veL 176 (648)
. .++.
T Consensus 289 ~-~~rv 293 (670)
T 4gua_A 289 V-RVSA 293 (670)
T ss_dssp E-EEEE
T ss_pred e-eeee
Confidence 3 3443
No 331
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=41.13 E-value=37 Score=35.23 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 6 GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 6 GgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
|.-+.|+|..+. ...|++.|.+..|++++ +++|...
T Consensus 206 G~~a~q~a~~~G---------a~~Vi~~~~~~~~~~~a----~~lGa~~ 241 (378)
T 3uko_A 206 GLAVAEGAKTAG---------ASRIIGIDIDSKKYETA----KKFGVNE 241 (378)
T ss_dssp HHHHHHHHHHHT---------CSCEEEECSCTTHHHHH----HTTTCCE
T ss_pred HHHHHHHHHHcC---------CCeEEEEcCCHHHHHHH----HHcCCcE
Confidence 445566665542 23799999999998865 5688754
No 332
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=40.78 E-value=26 Score=36.23 Aligned_cols=24 Identities=8% Similarity=-0.010 Sum_probs=18.4
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
..|++.|.+..|++.+ +++|...+
T Consensus 214 a~Vi~~~~~~~~~~~~----~~lGa~~v 237 (363)
T 3uog_A 214 AEVIVTSSSREKLDRA----FALGADHG 237 (363)
T ss_dssp CEEEEEESCHHHHHHH----HHHTCSEE
T ss_pred CEEEEEecCchhHHHH----HHcCCCEE
Confidence 3799999999998875 45787543
No 333
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=40.69 E-value=50 Score=32.15 Aligned_cols=123 Identities=7% Similarity=0.045 Sum_probs=63.9
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCcc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIE 83 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~ 83 (648)
|.||--.+++..|... ...|+..+.+..++..+.+.+ + .++.....|..+...+.. ..
T Consensus 16 as~gIG~a~a~~l~~~-------G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~-----------~~ 73 (255)
T 4eso_A 16 GTHGMGLATVRRLVEG-------GAEVLLTGRNESNIARIREEF---G-PRVHALRSDIADLNEIAV-----------LG 73 (255)
T ss_dssp CSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHH---G-GGEEEEECCTTCHHHHHH-----------HH
T ss_pred CCCHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHH-----------HH
Confidence 5567777788777652 247899999998887776554 3 345556566443211100 00
Q ss_pred cccccccccccEEEEcCCCCCCCcccc-CcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 84 SESNMGQLLFDRVLCDVPCSGDGTLRK-APDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 84 ~~~~~~~~~FDrILlDvPCSGdGtlrk-~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
..........|.++.-+--+..+.+.. .++-|.+ . ..-...-...+++.++.+++.+|+||+.+-
T Consensus 74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~---~-~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 74 AAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDR---Q-FAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp HHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHH---H-HHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHH---H-HHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 000011235787776554332222211 1111211 1 111112234567778888888899988643
No 334
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=40.60 E-value=11 Score=37.62 Aligned_cols=52 Identities=13% Similarity=-0.004 Sum_probs=38.4
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCC
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFP 66 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p 66 (648)
++++|.-|. + +. . ..+.|+|+|+|+.-+..+++++... +++.+.+.|+..++
T Consensus 29 G~G~G~lt~-l-~~--~-------~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 29 GPGLAALTE-P-VG--E-------RLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFN 80 (252)
T ss_dssp CCTTTTTHH-H-HH--T-------TCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCC
T ss_pred CCCCcHHHH-h-hh--C-------CCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCC
Confidence 578888888 4 32 1 1234999999999998888766443 58999999987754
No 335
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=40.21 E-value=1.4e+02 Score=28.23 Aligned_cols=52 Identities=8% Similarity=0.169 Sum_probs=36.9
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQ 63 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~ 63 (648)
|.||--.+++..|... .-.|++.+.+..++..+...++..+. ++.+...|..
T Consensus 19 asggiG~~la~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~ 70 (255)
T 1fmc_A 19 AGAGIGKEIAITFATA-------GASVVVSDINADAANHVVDEIQQLGG-QAFACRCDIT 70 (255)
T ss_dssp TTSHHHHHHHHHHHTT-------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTT
T ss_pred CccHHHHHHHHHHHHC-------CCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCC
Confidence 5677788888877652 23789999999988888777776653 4555555544
No 336
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=39.58 E-value=33 Score=34.72 Aligned_cols=22 Identities=5% Similarity=-0.055 Sum_probs=17.2
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCC
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTA 53 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~ 53 (648)
..|++.+.+..|++.++ .+|..
T Consensus 166 a~Vi~~~~~~~~~~~~~----~~Ga~ 187 (325)
T 3jyn_A 166 AKLIGTVSSPEKAAHAK----ALGAW 187 (325)
T ss_dssp CEEEEEESSHHHHHHHH----HHTCS
T ss_pred CEEEEEeCCHHHHHHHH----HcCCC
Confidence 37999999999988664 46754
No 337
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=39.57 E-value=41 Score=34.56 Aligned_cols=23 Identities=17% Similarity=0.213 Sum_probs=17.8
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
..|++.|.+..|+..++ ++|...
T Consensus 193 a~Vi~~~~~~~~~~~~~----~lGa~~ 215 (353)
T 4dup_A 193 AEVYATAGSTGKCEACE----RLGAKR 215 (353)
T ss_dssp CEEEEEESSHHHHHHHH----HHTCSE
T ss_pred CEEEEEeCCHHHHHHHH----hcCCCE
Confidence 47999999999988764 477653
No 338
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=39.33 E-value=2.6e+02 Score=27.04 Aligned_cols=54 Identities=13% Similarity=0.184 Sum_probs=40.6
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.+.+..++..+...++..+..++.+...|...
T Consensus 20 as~GIG~~~a~~L~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~ 73 (311)
T 3o26_A 20 GNKGIGFEICKQLSSN-------GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD 73 (311)
T ss_dssp CSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS
T ss_pred CCchHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC
Confidence 5677777888777652 24799999999999888888877766677777777554
No 339
>1wcu_A CBM29_1, non-catalytic protein 1; carbohydrate binding, carbohydrate binding module; 1.5A {Piromyces equi}
Probab=37.71 E-value=21 Score=32.25 Aligned_cols=17 Identities=35% Similarity=0.526 Sum_probs=13.7
Q ss_pred ccccEEEE-cCCCCCCCc
Q 006372 91 LLFDRVLC-DVPCSGDGT 107 (648)
Q Consensus 91 ~~FDrILl-DvPCSGdGt 107 (648)
..||||.+ |+|-||+..
T Consensus 112 ~~FDRI~~QD~P~~~~~I 129 (153)
T 1wcu_A 112 YQFDRIIVQDGPASNIPI 129 (153)
T ss_dssp EEESEEEEEETTCCCCCE
T ss_pred ccccEEEEecCCCCCCeE
Confidence 57999874 999888774
No 340
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=37.64 E-value=88 Score=30.43 Aligned_cols=54 Identities=4% Similarity=0.071 Sum_probs=39.8
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|+..+.+..++..+.+.++..+...+.+...|..+
T Consensus 18 as~gIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~ 71 (262)
T 3pk0_A 18 GTKGIGRGIATVFARA-------GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD 71 (262)
T ss_dssp CSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS
T ss_pred CCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC
Confidence 5567777777777652 23789999999999988888887775667777666544
No 341
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=36.83 E-value=1e+02 Score=29.96 Aligned_cols=53 Identities=6% Similarity=0.036 Sum_probs=37.2
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHH-hCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR-MCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkR-lg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.+.+..++..+...+.. .+ ..+.+...|..+
T Consensus 28 as~gIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~ 81 (266)
T 4egf_A 28 ATKGIGADIARAFAAA-------GARLVLSGRDVSELDAARRALGEQFG-TDVHTVAIDLAE 81 (266)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTS
T ss_pred CCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCC
Confidence 5567777777777652 24799999999999888877766 44 346666666554
No 342
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=36.46 E-value=38 Score=34.32 Aligned_cols=23 Identities=13% Similarity=0.060 Sum_probs=17.4
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
..|++.+.+..|++.+ +++|...
T Consensus 174 a~Vi~~~~~~~~~~~~----~~~ga~~ 196 (334)
T 3qwb_A 174 AHTIAVASTDEKLKIA----KEYGAEY 196 (334)
T ss_dssp CEEEEEESSHHHHHHH----HHTTCSE
T ss_pred CEEEEEeCCHHHHHHH----HHcCCcE
Confidence 4799999999998855 4577543
No 343
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=36.18 E-value=30 Score=35.47 Aligned_cols=23 Identities=17% Similarity=-0.002 Sum_probs=17.8
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
..|++.+.+..|++.++ ++|...
T Consensus 190 a~Vi~~~~~~~~~~~~~----~~Ga~~ 212 (349)
T 3pi7_A 190 FRPIVTVRRDEQIALLK----DIGAAH 212 (349)
T ss_dssp CEEEEEESCGGGHHHHH----HHTCSE
T ss_pred CEEEEEeCCHHHHHHHH----HcCCCE
Confidence 38999999999988764 577653
No 344
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=34.70 E-value=57 Score=31.61 Aligned_cols=54 Identities=11% Similarity=-0.032 Sum_probs=37.4
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh--CCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM--CTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl--g~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|+..+.+..++..+...+... +...+.+...|..+
T Consensus 15 as~GIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 70 (250)
T 3nyw_A 15 ASQGIGAVIAAGLATD-------GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD 70 (250)
T ss_dssp TTSHHHHHHHHHHHHH-------TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC
T ss_pred CCcHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC
Confidence 5567777777776542 247889999999999998888776 32455556566543
No 345
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=34.26 E-value=1.2e+02 Score=29.78 Aligned_cols=54 Identities=6% Similarity=0.007 Sum_probs=39.7
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..+... ...|++.+.+..++..+...++..+..++.+...|..+
T Consensus 36 asggIG~~la~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 89 (286)
T 1xu9_A 36 ASKGIGREMAYHLAKM-------GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED 89 (286)
T ss_dssp CSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTC
T ss_pred CCcHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 5677777888777642 24799999999999988888877776667666666543
No 346
>2hlg_A Fruit-specific protein; beta antiparallel, plant protein; NMR {Lycopersicon esculentum}
Probab=34.25 E-value=13 Score=26.72 Aligned_cols=13 Identities=38% Similarity=0.738 Sum_probs=9.2
Q ss_pred cCcEEEEecccCCc
Q 006372 143 VGGRIVYSTCSMNP 156 (648)
Q Consensus 143 ~GG~LVYSTCSl~p 156 (648)
++|. .|+|||+.|
T Consensus 27 ~~G~-ty~~Cs~lP 39 (39)
T 2hlg_A 27 QYGL-TYRTCNLLP 39 (39)
T ss_dssp SSCC-EEEEEESCC
T ss_pred CCCc-cceeeccCC
Confidence 3443 399999976
No 347
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=33.90 E-value=57 Score=33.66 Aligned_cols=23 Identities=17% Similarity=0.263 Sum_probs=17.8
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
..|++.|.+..|++.+ +++|...
T Consensus 221 ~~Vi~~~~~~~~~~~a----~~lGa~~ 243 (376)
T 1e3i_A 221 SRIIAIDINGEKFPKA----KALGATD 243 (376)
T ss_dssp SEEEEECSCGGGHHHH----HHTTCSE
T ss_pred CeEEEEcCCHHHHHHH----HHhCCcE
Confidence 3799999999998865 4578753
No 348
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=33.78 E-value=55 Score=33.93 Aligned_cols=22 Identities=9% Similarity=0.001 Sum_probs=17.1
Q ss_pred EEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 29 MVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 29 ~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
.|++.|.+..|++.++ ++|...
T Consensus 220 ~Vi~~~~~~~~~~~a~----~lGa~~ 241 (369)
T 1uuf_A 220 HVVAFTTSEAKREAAK----ALGADE 241 (369)
T ss_dssp EEEEEESSGGGHHHHH----HHTCSE
T ss_pred EEEEEeCCHHHHHHHH----HcCCcE
Confidence 5999999999988664 477653
No 349
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=33.61 E-value=29 Score=35.38 Aligned_cols=35 Identities=29% Similarity=0.261 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 6 GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 6 GgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
|.-++|++..+ ...|++.|.+..|++.++ ++|...
T Consensus 158 G~~~~~~a~~~----------Ga~Vi~~~~~~~~~~~~~----~lga~~ 192 (340)
T 3gms_A 158 GHLFAQLSQIL----------NFRLIAVTRNNKHTEELL----RLGAAY 192 (340)
T ss_dssp HHHHHHHHHHH----------TCEEEEEESSSTTHHHHH----HHTCSE
T ss_pred HHHHHHHHHHc----------CCEEEEEeCCHHHHHHHH----hCCCcE
Confidence 44555665543 247999999999988764 467653
No 350
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=33.53 E-value=36 Score=34.23 Aligned_cols=35 Identities=14% Similarity=-0.039 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 6 GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 6 GgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
|.-+.|++..+. ..|++.+ +..|++.+ +++|...+
T Consensus 155 G~~a~qlak~~G----------a~Vi~~~-~~~~~~~~----~~lGa~~v 189 (315)
T 3goh_A 155 NNLLTQMLNNAG----------YVVDLVS-ASLSQALA----AKRGVRHL 189 (315)
T ss_dssp HHHHHHHHHHHT----------CEEEEEC-SSCCHHHH----HHHTEEEE
T ss_pred HHHHHHHHHHcC----------CEEEEEE-ChhhHHHH----HHcCCCEE
Confidence 445666666542 3799999 88888876 45776433
No 351
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=33.18 E-value=1.1e+02 Score=29.35 Aligned_cols=52 Identities=6% Similarity=-0.113 Sum_probs=36.2
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEA 62 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da 62 (648)
|.||--.+++..|... ...|+..+.+..++..+.+.+...+...+.+...|.
T Consensus 20 as~gIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~ 71 (252)
T 3f1l_A 20 ASDGIGREAAMTYARY-------GATVILLGRNEEKLRQVASHINEETGRQPQWFILDL 71 (252)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCT
T ss_pred CCChHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 4566677777777642 247899999999999888888766544444454553
No 352
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=32.84 E-value=53 Score=33.87 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=17.5
Q ss_pred EEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 29 MVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 29 ~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
.|++.|.+..|++.+ +++|...
T Consensus 219 ~Vi~~~~~~~~~~~~----~~lGa~~ 240 (374)
T 1cdo_A 219 RIIAVDLNPDKFEKA----KVFGATD 240 (374)
T ss_dssp EEEEECSCGGGHHHH----HHTTCCE
T ss_pred EEEEEcCCHHHHHHH----HHhCCce
Confidence 799999999998866 4578753
No 353
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=32.60 E-value=99 Score=31.05 Aligned_cols=24 Identities=13% Similarity=0.003 Sum_probs=17.5
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
..|++.+.+..|++.++ .+|...+
T Consensus 175 a~vi~~~~~~~~~~~~~----~lGa~~~ 198 (328)
T 1xa0_A 175 YTVEASTGKAAEHDYLR----VLGAKEV 198 (328)
T ss_dssp CCEEEEESCTTCHHHHH----HTTCSEE
T ss_pred CEEEEEECCHHHHHHHH----HcCCcEE
Confidence 36899999988887663 5786543
No 354
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=32.38 E-value=46 Score=35.10 Aligned_cols=51 Identities=6% Similarity=-0.014 Sum_probs=39.3
Q ss_pred ccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccC
Q 006372 3 AAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHF 65 (648)
Q Consensus 3 AAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~ 65 (648)
.++|.-|..|++... ...|+|+|+|..=+..|++.+ ...++.|++.|+..+
T Consensus 67 PG~G~LT~~Ll~~~~---------~~~vvavE~D~~l~~~L~~~~---~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 67 PGVGIQSAIFYNKYC---------PRQYSLLEKRSSLYKFLNAKF---EGSPLQILKRDPYDW 117 (353)
T ss_dssp CTTCHHHHHHHHHHC---------CSEEEEECCCHHHHHHHHHHT---TTSSCEEECSCTTCH
T ss_pred CCCCHHHHHHHhhCC---------CCEEEEEecCHHHHHHHHHhc---cCCCEEEEECCccch
Confidence 478999999988642 247999999998667776654 346899999998554
No 355
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=32.18 E-value=60 Score=39.01 Aligned_cols=87 Identities=7% Similarity=0.022 Sum_probs=51.1
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCc----ccCCCCCC
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGC----RANKNFSS 76 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~----~~~~~~~~ 76 (648)
+||+-||-+.-+-.+ . -.-.|+|+|+++..++.+++|. ++..+.+.|...+... .+....
T Consensus 546 LFaG~GGlslGl~~A-G--------~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~~di~~~~-- 609 (1002)
T 3swr_A 546 VFSGCGGLSEGFHQA-G--------ISDTLWAIEMWDPAAQAFRLNN-----PGSTVFTEDCNILLKLVMAGETTNSR-- 609 (1002)
T ss_dssp ESCTTSHHHHHHHHH-T--------SEEEEEEECSSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHHHTCSBCTT--
T ss_pred eccCccHHHHHHHHC-C--------CCceEEEEECCHHHHHHHHHhC-----CCCccccccHHHHhhhccchhhhhhh--
Confidence 589999998877443 0 0126889999999999887763 4444555553222100 000000
Q ss_pred CCCcCcccccccccccccEEEEcCCCCCCCcccc
Q 006372 77 ASDKGIESESNMGQLLFDRVLCDVPCSGDGTLRK 110 (648)
Q Consensus 77 ~~~~~~~~~~~~~~~~FDrILlDvPCSGdGtlrk 110 (648)
.........+|.|+.-+||-+--...+
T Consensus 610 -------~~~lp~~~~vDll~GGpPCQ~FS~ag~ 636 (1002)
T 3swr_A 610 -------GQRLPQKGDVEMLCGGPPCQGFSGMNR 636 (1002)
T ss_dssp -------CCBCCCTTTCSEEEECCCCTTCCSSSC
T ss_pred -------hhhcccCCCeeEEEEcCCCcchhhhCC
Confidence 000011246899999999988765543
No 356
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=32.13 E-value=76 Score=32.64 Aligned_cols=36 Identities=11% Similarity=0.155 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 6 GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 6 GgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
|.-+.|+|..+. ...|++.|.+..|++.+ +++|...
T Consensus 203 G~~avqla~~~G---------a~~Vi~~~~~~~~~~~~----~~lGa~~ 238 (373)
T 2fzw_A 203 GLAVIMGCKVAG---------ASRIIGVDINKDKFARA----KEFGATE 238 (373)
T ss_dssp HHHHHHHHHHHT---------CSEEEEECSCGGGHHHH----HHHTCSE
T ss_pred HHHHHHHHHHcC---------CCeEEEEcCCHHHHHHH----HHcCCce
Confidence 444566665542 23799999999998876 4578754
No 357
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=31.97 E-value=61 Score=33.40 Aligned_cols=36 Identities=6% Similarity=-0.021 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 6 GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 6 GgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
|.-+.|+|..+. ...|++.|.+..|++.+ +++|...
T Consensus 204 G~~aiqlak~~G---------a~~Vi~~~~~~~~~~~a----~~lGa~~ 239 (373)
T 1p0f_A 204 GFSAIVGCKAAG---------ASRIIGVGTHKDKFPKA----IELGATE 239 (373)
T ss_dssp HHHHHHHHHHHT---------CSEEEEECSCGGGHHHH----HHTTCSE
T ss_pred HHHHHHHHHHcC---------CCeEEEECCCHHHHHHH----HHcCCcE
Confidence 445566666542 23799999999998866 4588754
No 358
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=31.79 E-value=1.1e+02 Score=30.30 Aligned_cols=121 Identities=12% Similarity=0.017 Sum_probs=61.6
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCccccc
Q 006372 7 SKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESES 86 (648)
Q Consensus 7 gKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~ 86 (648)
|--.+++..|... ...|++.+.+......+....+..+. +.++..|..+...+. ......
T Consensus 43 GIG~~ia~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~-----------~~~~~~ 102 (296)
T 3k31_A 43 SLAWGIAKAVCAQ-------GAEVALTYLSETFKKRVDPLAESLGV--KLTVPCDVSDAESVD-----------NMFKVL 102 (296)
T ss_dssp SHHHHHHHHHHHT-------TCEEEEEESSGGGHHHHHHHHHHHTC--CEEEECCTTCHHHHH-----------HHHHHH
T ss_pred CHHHHHHHHHHHC-------CCEEEEEeCChHHHHHHHHHHHhcCC--eEEEEcCCCCHHHHH-----------HHHHHH
Confidence 5666677766542 24788999998777777776666654 344445544321110 000000
Q ss_pred ccccccccEEEEcCCCCCC----Ccc-ccCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 87 NMGQLLFDRVLCDVPCSGD----GTL-RKAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 87 ~~~~~~FDrILlDvPCSGd----Gtl-rk~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
.......|.++.-+--... +.+ ...++-|.+ . ..-...-...+++.++.+++.+|+||+.+
T Consensus 103 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~---~-~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 103 AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLT---S-MHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHH---H-HHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHH---H-HHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 0112357888775532221 111 111111211 1 11111224567778888888899999854
No 359
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=31.76 E-value=56 Score=33.34 Aligned_cols=24 Identities=13% Similarity=0.009 Sum_probs=17.8
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
..|++.+.+..|++.++ ++|...+
T Consensus 185 a~Vi~~~~~~~~~~~~~----~~ga~~v 208 (342)
T 4eye_A 185 AKVIAVVNRTAATEFVK----SVGADIV 208 (342)
T ss_dssp CEEEEEESSGGGHHHHH----HHTCSEE
T ss_pred CEEEEEeCCHHHHHHHH----hcCCcEE
Confidence 38999999999987664 4676533
No 360
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=31.74 E-value=1.7e+02 Score=28.40 Aligned_cols=54 Identities=11% Similarity=0.100 Sum_probs=38.3
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHH-hCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKR-MCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkR-lg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.+.+..++..+...+.. .+..++.....|..+
T Consensus 16 as~GIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~ 70 (265)
T 3lf2_A 16 GSSGIGLATVELLLEA-------GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD 70 (265)
T ss_dssp CSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC
T ss_pred CCChHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC
Confidence 5567777777777652 24789999999999988888876 444456666666544
No 361
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=31.58 E-value=1.7e+02 Score=27.73 Aligned_cols=51 Identities=8% Similarity=-0.063 Sum_probs=37.9
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHE 61 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~D 61 (648)
|.||--.+++..|... ...|++.+.+..++..+...++..+...+.+...|
T Consensus 22 as~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d 72 (247)
T 3i1j_A 22 AARGIGAAAARAYAAH-------GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALN 72 (247)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECC
T ss_pred CCChHHHHHHHHHHHC-------CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEec
Confidence 5577777788777652 24789999999999999999988876655555444
No 362
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=31.46 E-value=31 Score=35.53 Aligned_cols=36 Identities=28% Similarity=0.492 Sum_probs=26.9
Q ss_pred HHHHHHHhhccccCcEEEEecccCCccccHHHHHHHHHh
Q 006372 131 VQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 169 (648)
Q Consensus 131 ~~IL~~Al~lLk~GG~LVYSTCSl~p~ENEaVV~~~L~~ 169 (648)
.+.|..|..+|+|||+|+-- |++..|+ -+|..+++.
T Consensus 213 ~~~L~~a~~~L~~gGrl~vi--sfHSLED-RiVK~~~~~ 248 (285)
T 1wg8_A 213 KEFLEQAAEVLAPGGRLVVI--AFHSLED-RVVKRFLRE 248 (285)
T ss_dssp HHHHHHHHHHEEEEEEEEEE--ECSHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEE--ecCcHHH-HHHHHHHHh
Confidence 35678999999999999643 4566676 567777775
No 363
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=31.39 E-value=1.4e+02 Score=29.70 Aligned_cols=54 Identities=7% Similarity=0.001 Sum_probs=37.5
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC--cEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~--nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.+.+..++..+...+...+.. ++.+...|..+
T Consensus 34 as~gIG~aia~~L~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d 89 (297)
T 1xhl_A 34 SSNGIGRSAAVIFAKE-------GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 89 (297)
T ss_dssp CSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS
T ss_pred CCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC
Confidence 5677777788777652 247899999999988887777766542 56666566443
No 364
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=31.18 E-value=67 Score=33.05 Aligned_cols=36 Identities=19% Similarity=0.303 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 6 GSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 6 GgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
|.-+.|+|..+. ...|++.|.+..|++++ +++|...
T Consensus 203 G~~a~qlak~~G---------a~~Vi~~~~~~~~~~~a----~~lGa~~ 238 (371)
T 1f8f_A 203 GLSALLAAKVCG---------ASIIIAVDIVESRLELA----KQLGATH 238 (371)
T ss_dssp HHHHHHHHHHHT---------CSEEEEEESCHHHHHHH----HHHTCSE
T ss_pred HHHHHHHHHHcC---------CCeEEEECCCHHHHHHH----HHcCCCE
Confidence 445566666542 23699999999998876 4577653
No 365
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=31.14 E-value=52 Score=33.74 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=18.4
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
..|++.|.+..|++++ +++|...+
T Consensus 197 ~~Vi~~~~~~~~~~~a----~~lGa~~v 220 (356)
T 1pl8_A 197 AQVVVTDLSATRLSKA----KEIGADLV 220 (356)
T ss_dssp SEEEEEESCHHHHHHH----HHTTCSEE
T ss_pred CEEEEECCCHHHHHHH----HHhCCCEE
Confidence 3799999999998866 45787643
No 366
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=29.19 E-value=46 Score=34.25 Aligned_cols=23 Identities=4% Similarity=-0.010 Sum_probs=17.4
Q ss_pred EEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 29 MVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 29 ~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
.|++.|.+..|++.++ ++|...+
T Consensus 205 ~Vi~~~~~~~~~~~~~----~lGa~~v 227 (360)
T 1piw_A 205 ETYVISRSSRKREDAM----KMGADHY 227 (360)
T ss_dssp EEEEEESSSTTHHHHH----HHTCSEE
T ss_pred EEEEEcCCHHHHHHHH----HcCCCEE
Confidence 6999999999987664 4776543
No 367
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=29.08 E-value=58 Score=32.93 Aligned_cols=17 Identities=18% Similarity=0.169 Sum_probs=14.5
Q ss_pred HHHHhhccccCcEEEEe
Q 006372 134 AMRGISLLKVGGRIVYS 150 (648)
Q Consensus 134 L~~Al~lLk~GG~LVYS 150 (648)
+..++++|++||++|..
T Consensus 231 ~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 231 LDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHhhCCEEEEE
Confidence 67789999999998864
No 368
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=28.77 E-value=75 Score=32.72 Aligned_cols=22 Identities=14% Similarity=0.247 Sum_probs=17.5
Q ss_pred EEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 29 MVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 29 ~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
.|++.|.+..|++.+ +++|...
T Consensus 218 ~Vi~~~~~~~~~~~~----~~lGa~~ 239 (374)
T 2jhf_A 218 RIIGVDINKDKFAKA----KEVGATE 239 (374)
T ss_dssp EEEEECSCGGGHHHH----HHTTCSE
T ss_pred eEEEEcCCHHHHHHH----HHhCCce
Confidence 799999999998866 4678753
No 369
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=28.51 E-value=88 Score=31.75 Aligned_cols=27 Identities=7% Similarity=-0.074 Sum_probs=20.2
Q ss_pred cccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCCh
Q 006372 2 CAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDV 37 (648)
Q Consensus 2 CAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~ 37 (648)
-|||||.|-.++..-. ...|+|+|+-.
T Consensus 86 GaapGGWSq~~a~~~g---------~~~V~avdvG~ 112 (267)
T 3p8z_A 86 GCGRGGWSYYCAGLKK---------VTEVRGYTKGG 112 (267)
T ss_dssp SCTTSHHHHHHHTSTT---------EEEEEEECCCS
T ss_pred CCCCCcHHHHHHHhcC---------CCEEEEEecCC
Confidence 3899999988766522 35899999854
No 370
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=28.41 E-value=80 Score=32.23 Aligned_cols=22 Identities=14% Similarity=0.157 Sum_probs=17.2
Q ss_pred EEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 29 MVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 29 ~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
.|++.|.+..|++.+ +.+|...
T Consensus 194 ~Vi~~~~~~~~~~~~----~~lGa~~ 215 (352)
T 1e3j_A 194 FVVCTARSPRRLEVA----KNCGADV 215 (352)
T ss_dssp EEEEEESCHHHHHHH----HHTTCSE
T ss_pred EEEEEcCCHHHHHHH----HHhCCCE
Confidence 499999999998876 4578763
No 371
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=28.12 E-value=76 Score=31.78 Aligned_cols=54 Identities=6% Similarity=0.043 Sum_probs=39.0
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|+..|.+..++..+...++..+..++.++..|..+
T Consensus 49 as~GIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d 102 (293)
T 3rih_A 49 GTKGIGRGIATVFARA-------GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD 102 (293)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC
T ss_pred CCcHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC
Confidence 5667777787777652 24788999999999888888776665567666666544
No 372
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=28.07 E-value=1.5e+02 Score=29.24 Aligned_cols=54 Identities=2% Similarity=-0.126 Sum_probs=38.5
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.|.+..++..+.+.+...+...+.+...|..+
T Consensus 41 as~GIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d 94 (281)
T 4dry_A 41 GGTGVGRGIAQALSAE-------GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD 94 (281)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC
T ss_pred CCCHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC
Confidence 5577777788777652 24799999999999988888876655555556666544
No 373
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=28.04 E-value=1.2e+02 Score=29.03 Aligned_cols=53 Identities=8% Similarity=0.045 Sum_probs=35.9
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcC-ChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~-d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.+. +..++..+...++..+. ++.+...|..+
T Consensus 29 asggiG~~la~~l~~~-------G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 82 (274)
T 1ja9_A 29 AGRGIGRGIAIELGRR-------GASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISK 82 (274)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTS
T ss_pred CCchHHHHHHHHHHHC-------CCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCC
Confidence 5677778888877652 236888888 88888877777776653 45555555443
No 374
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=27.26 E-value=1.5e+02 Score=28.18 Aligned_cols=53 Identities=11% Similarity=0.141 Sum_probs=38.0
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.|.+..++..+.+.++..+. .+.+...|..+
T Consensus 17 as~giG~~~a~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 69 (253)
T 3qiv_A 17 SGGGIGQAYAEALARE-------GAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSD 69 (253)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTS
T ss_pred CCChHHHHHHHHHHHC-------CCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCC
Confidence 5677777888777653 24789999999999999888877654 45555556544
No 375
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=27.00 E-value=33 Score=35.23 Aligned_cols=18 Identities=22% Similarity=0.336 Sum_probs=15.3
Q ss_pred HHHHhhccccCcEEEEec
Q 006372 134 AMRGISLLKVGGRIVYST 151 (648)
Q Consensus 134 L~~Al~lLk~GG~LVYST 151 (648)
+..++++|++||++|...
T Consensus 266 ~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 266 IAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HHHHHHHSCTTCEEEECC
T ss_pred HHHHHHHhcCCCEEEEEc
Confidence 677899999999998653
No 376
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=26.89 E-value=38 Score=35.22 Aligned_cols=24 Identities=17% Similarity=-0.033 Sum_probs=18.5
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
..|++.+.+..|++.++ ++|...+
T Consensus 221 ~~Vi~~~~~~~~~~~~~----~lGa~~v 244 (380)
T 1vj0_A 221 ENVIVIAGSPNRLKLAE----EIGADLT 244 (380)
T ss_dssp SEEEEEESCHHHHHHHH----HTTCSEE
T ss_pred ceEEEEcCCHHHHHHHH----HcCCcEE
Confidence 38999999999988764 5787543
No 377
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=26.65 E-value=1.9e+02 Score=28.64 Aligned_cols=126 Identities=9% Similarity=-0.034 Sum_probs=63.7
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCC--hHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcC
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLD--VQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKG 81 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d--~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~ 81 (648)
|.||--.+++..|... ...|+..+.+ ..++..+...++..+. ++.+...|..+...+. .
T Consensus 57 as~GIG~aia~~la~~-------G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~-----------~ 117 (294)
T 3r3s_A 57 GDSGIGRAAAIAYARE-------GADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGDLSDESFAR-----------S 117 (294)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCCTTSHHHHH-----------H
T ss_pred CCcHHHHHHHHHHHHC-------CCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEecCCCHHHHH-----------H
Confidence 4567777788777652 2367888876 4556677777776664 4555555543321100 0
Q ss_pred cccccccccccccEEEEcCCCCC-CCccc-cCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 82 IESESNMGQLLFDRVLCDVPCSG-DGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 82 ~~~~~~~~~~~FDrILlDvPCSG-dGtlr-k~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
............|.++.-+--.+ .+.+. -.++-|.+ . ..--..-...+++.++.+++.+|+||+.+.
T Consensus 118 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~---~-~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 118 LVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQ---T-FAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHH---H-HHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHH---H-HHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 00000011235787776543211 11111 11121211 1 111112235677888888888999998654
No 378
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=26.65 E-value=80 Score=33.03 Aligned_cols=23 Identities=26% Similarity=0.271 Sum_probs=18.1
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
..|++.|.+..|++++ +++|...
T Consensus 239 ~~Vi~~~~~~~~~~~~----~~lGa~~ 261 (404)
T 3ip1_A 239 SKVILSEPSEVRRNLA----KELGADH 261 (404)
T ss_dssp SEEEEECSCHHHHHHH----HHHTCSE
T ss_pred CEEEEECCCHHHHHHH----HHcCCCE
Confidence 4899999999998866 4678653
No 379
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=26.63 E-value=2e+02 Score=26.94 Aligned_cols=55 Identities=7% Similarity=0.058 Sum_probs=37.6
Q ss_pred ccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 3 AAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 3 AAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
-|.||--.+++..|... ...|+..+.+..++..+.+.+.......+.+...|..+
T Consensus 9 Gas~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 63 (235)
T 3l77_A 9 GASRGIGEAIARALARD-------GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 63 (235)
T ss_dssp SCSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC
T ss_pred CCCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCC
Confidence 35677777888777652 23688999999999888887763323456666666544
No 380
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=26.48 E-value=1.1e+02 Score=32.59 Aligned_cols=54 Identities=17% Similarity=0.081 Sum_probs=40.5
Q ss_pred ccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHh---CC-CcEEEeecccc
Q 006372 3 AAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRM---CT-ANLIVTNHEAQ 63 (648)
Q Consensus 3 AAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRl---g~-~nv~vtn~Da~ 63 (648)
|.-|..|..++..+.. +.+.|+|+|.++.-+..|+++++.+ +. +++.+.+....
T Consensus 235 An~G~~s~~~a~~~~~-------~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 235 ASIGESLAGLIGVTKG-------KFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CTTSHHHHHHHHHHTS-------CCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred CCcCHHHHHHHHHhcC-------CCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 5678888777643321 1379999999999999999999983 35 78888776543
No 381
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=26.22 E-value=1.9e+02 Score=28.68 Aligned_cols=120 Identities=8% Similarity=0.001 Sum_probs=58.2
Q ss_pred HHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCcccccc
Q 006372 8 KTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGIESESN 87 (648)
Q Consensus 8 KT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~~~~~~ 87 (648)
--.+++..|... ...|++.+.+......+.+..+..+ .+.+...|..+...+. .......
T Consensus 45 IG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~-----------~~~~~~~ 104 (293)
T 3grk_A 45 IAWGIAKAAREA-------GAELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASID-----------AVFETLE 104 (293)
T ss_dssp HHHHHHHHHHHT-------TCEEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHHH-----------HHHHHHH
T ss_pred HHHHHHHHHHHC-------CCEEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHHH-----------HHHHHHH
Confidence 555666665542 2468888988766666666555555 3555555644321110 0000000
Q ss_pred cccccccEEEEcCCCCC----CCccc-cCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEec
Q 006372 88 MGQLLFDRVLCDVPCSG----DGTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYST 151 (648)
Q Consensus 88 ~~~~~FDrILlDvPCSG----dGtlr-k~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYST 151 (648)
......|.++.-+--+. .+.+. ..++ .|... ..-...-...+++.++.+++.+|+||+.+
T Consensus 105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~---~~~~~-~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEA---NFTNT-MLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHTSCCSEEEECCCCCCHHHHTSCGGGCCHH---HHHHH-HHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HhcCCCCEEEECCccCCcccccccccccCHH---HHHHH-HHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 11235788776543221 11111 1111 12111 11111223456777788888899998865
No 382
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=26.20 E-value=77 Score=32.63 Aligned_cols=23 Identities=13% Similarity=0.083 Sum_probs=17.5
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCc
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTAN 54 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~n 54 (648)
..|++.+.+..|+..++ ++|...
T Consensus 189 a~Vi~~~~~~~~~~~~~----~~Ga~~ 211 (362)
T 2c0c_A 189 CHVIGTCSSDEKSAFLK----SLGCDR 211 (362)
T ss_dssp CEEEEEESSHHHHHHHH----HTTCSE
T ss_pred CEEEEEECCHHHHHHHH----HcCCcE
Confidence 37999999998887664 477653
No 383
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=26.06 E-value=2.6e+02 Score=26.99 Aligned_cols=53 Identities=11% Similarity=0.034 Sum_probs=36.1
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeecccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQ 63 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~ 63 (648)
|.||--.+++..+... ...|++.|.+..++..+.+.+...+. ..+.....|..
T Consensus 18 as~gIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~ 71 (267)
T 3t4x_A 18 STAGIGKAIATSLVAE-------GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG 71 (267)
T ss_dssp CSSHHHHHHHHHHHHT-------TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTT
T ss_pred CCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCC
Confidence 5577777777777652 24799999999999888888776542 34444445543
No 384
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=25.99 E-value=2.3e+02 Score=27.31 Aligned_cols=53 Identities=9% Similarity=0.034 Sum_probs=38.4
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.+.+..++..+.+.+...+. .+.+...|...
T Consensus 37 as~gIG~~la~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 89 (262)
T 3rkr_A 37 ASRGIGAAIARKLGSL-------GARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSH 89 (262)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCChHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCC
Confidence 5677777888777652 24689999999999999888877664 45566566544
No 385
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=25.97 E-value=2.1e+02 Score=27.93 Aligned_cols=54 Identities=2% Similarity=-0.034 Sum_probs=38.3
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC--cEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~--nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.|.+..++..+.+.++..+.. .+.+...|..+
T Consensus 19 as~gIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~ 74 (281)
T 3svt_A 19 GGSGIGKGVAAGLVAA-------GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN 74 (281)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS
T ss_pred CCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC
Confidence 5567777788777652 247889999999999888888777653 45555556443
No 386
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=25.92 E-value=1.6e+02 Score=28.79 Aligned_cols=54 Identities=6% Similarity=-0.061 Sum_probs=37.0
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC--cEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA--NLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~--nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.+.+..++..+...+...+.. ++.+...|..+
T Consensus 14 as~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 69 (280)
T 1xkq_A 14 SSNGIGRTTAILFAQE-------GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT 69 (280)
T ss_dssp CSSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS
T ss_pred CCChHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC
Confidence 5677777888777652 247899999999888887777655432 56666666543
No 387
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=25.75 E-value=82 Score=32.28 Aligned_cols=39 Identities=3% Similarity=0.105 Sum_probs=24.3
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCC
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTA 53 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~ 53 (648)
|.||--..+++++... ...|++.|.+..|++.+ +++|..
T Consensus 171 a~ggiG~~~~~~a~~~-------Ga~Vi~~~~~~~~~~~~----~~~g~~ 209 (354)
T 2j8z_A 171 GLSGVGTAAIQLTRMA-------GAIPLVTAGSQKKLQMA----EKLGAA 209 (354)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHH----HHHTCS
T ss_pred CccHHHHHHHHHHHHc-------CCEEEEEeCCHHHHHHH----HHcCCc
Confidence 3455544444444431 24799999999998876 346654
No 388
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=25.35 E-value=3.2e+02 Score=29.74 Aligned_cols=44 Identities=20% Similarity=0.267 Sum_probs=32.0
Q ss_pred HHHhhccccCcEEEEecccCCccccHHHHHHHH-HhCC----CceEEEeC
Q 006372 135 MRGISLLKVGGRIVYSTCSMNPVENEAVVAEIL-RKCE----GSVELVDV 179 (648)
Q Consensus 135 ~~Al~lLk~GG~LVYSTCSl~p~ENEaVV~~~L-~~~~----g~veLvd~ 179 (648)
....+.+++|..||+.+ |+.|.-.+.+...++ +..+ ..+.+++.
T Consensus 131 ~~i~~~l~~g~iVV~~S-Tv~pgtt~~v~~~ile~~~g~~~~~d~~v~~~ 179 (478)
T 3g79_A 131 RNVGKYLKPGMLVVLES-TITPGTTEGMAKQILEEESGLKAGEDFALAHA 179 (478)
T ss_dssp HHHHHHCCTTCEEEECS-CCCTTTTTTHHHHHHHHHHCCCBTTTBEEEEC
T ss_pred HHHHhhcCCCcEEEEeC-CCChHHHHHHHHHHHHHhcCCCcCCceeEEeC
Confidence 44556788988888775 999999999998888 3333 24677765
No 389
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=25.07 E-value=1.6e+02 Score=29.59 Aligned_cols=54 Identities=6% Similarity=0.063 Sum_probs=40.0
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~ 64 (648)
|.||-..+++..|... .-.|++.+.+..++..+.+.+...+. .++.+...|...
T Consensus 16 as~gIG~~la~~l~~~-------G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~ 70 (319)
T 3ioy_A 16 GANGVGIGLVRQLLNQ-------GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70 (319)
T ss_dssp TTSTHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC
T ss_pred CchHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC
Confidence 5678888888877652 23799999999999999888877664 256666666544
No 390
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=25.06 E-value=66 Score=34.33 Aligned_cols=24 Identities=13% Similarity=0.115 Sum_probs=17.8
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
..|++.+.+..|++.+ +++|...+
T Consensus 254 a~vi~~~~~~~~~~~~----~~lGa~~v 277 (456)
T 3krt_A 254 ANPICVVSSPQKAEIC----RAMGAEAI 277 (456)
T ss_dssp CEEEEEESSHHHHHHH----HHHTCCEE
T ss_pred CeEEEEECCHHHHHHH----HhhCCcEE
Confidence 4788888899998876 45787543
No 391
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=24.44 E-value=1.7e+02 Score=29.17 Aligned_cols=53 Identities=6% Similarity=0.043 Sum_probs=37.8
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.+.+..++..+...++..+. ++.+...|.++
T Consensus 39 as~gIG~~la~~l~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 91 (301)
T 3tjr_A 39 GASGIGLATATEFARR-------GARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRH 91 (301)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCCHHHHHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCC
Confidence 5677777888777652 24789999999999988888876654 45555556544
No 392
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=24.30 E-value=62 Score=33.10 Aligned_cols=35 Identities=34% Similarity=0.567 Sum_probs=25.9
Q ss_pred HHHHHHhhccccCcEEEEecccCCccccHHHHHHHHHh
Q 006372 132 QIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 169 (648)
Q Consensus 132 ~IL~~Al~lLk~GG~LVYSTCSl~p~ENEaVV~~~L~~ 169 (648)
+.|..|..+|+|||+|+-- |++..|+ -+|..+++.
T Consensus 226 ~~l~~~~~~l~~ggr~~vi--sfhsled-r~vk~~~~~ 260 (301)
T 1m6y_A 226 EFLKKAEDLLNPGGRIVVI--SFHSLED-RIVKETFRN 260 (301)
T ss_dssp HHHHHGGGGEEEEEEEEEE--ESSHHHH-HHHHHHHHH
T ss_pred HHHHHHHHhhCCCCEEEEE--ecCcHHH-HHHHHHhhc
Confidence 5677899999999999644 3455475 567777776
No 393
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=24.16 E-value=1.9e+02 Score=27.76 Aligned_cols=52 Identities=6% Similarity=-0.012 Sum_probs=35.9
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQ 63 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~ 63 (648)
|.||--.+++..|... ...|++.+.+..++..+...++..+. ++.+...|-.
T Consensus 10 as~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~ 61 (256)
T 1geg_A 10 AGQGIGKAIALRLVKD-------GFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVS 61 (256)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTT
T ss_pred CCChHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCC
Confidence 5677777888777652 23788999999988888777766553 4555555544
No 394
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=23.83 E-value=2.6e+02 Score=26.99 Aligned_cols=54 Identities=17% Similarity=0.090 Sum_probs=38.5
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCC-CcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCT-ANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~-~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.+.+..++..+...++..+. ..+.+...|...
T Consensus 40 asggIG~~la~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 94 (279)
T 1xg5_A 40 ASGGIGAAVARALVQQ-------GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94 (279)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC
T ss_pred CCchHHHHHHHHHHHC-------CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC
Confidence 5677777888777652 24789999999999888888877765 345666666543
No 395
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=23.82 E-value=94 Score=31.25 Aligned_cols=17 Identities=24% Similarity=0.333 Sum_probs=14.3
Q ss_pred HHHHhhccccCcEEEEe
Q 006372 134 AMRGISLLKVGGRIVYS 150 (648)
Q Consensus 134 L~~Al~lLk~GG~LVYS 150 (648)
+..++++|++||++|..
T Consensus 230 ~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 230 LASLLSKIQYGGSVAVS 246 (330)
T ss_dssp HHHHHTTEEEEEEEEEC
T ss_pred HHHHHHhhcCCCEEEEE
Confidence 56789999999998854
No 396
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=23.70 E-value=1.5e+02 Score=29.18 Aligned_cols=53 Identities=4% Similarity=-0.007 Sum_probs=37.1
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|+..+.+..++..+...++..+. ++.+...|..+
T Consensus 40 as~GIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d 92 (276)
T 3r1i_A 40 ASTGIGKKVALAYAEA-------GAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQ 92 (276)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTC
T ss_pred CCCHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCC
Confidence 5567777777777652 24789999999999999888877764 34445555443
No 397
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=23.67 E-value=3e+02 Score=26.84 Aligned_cols=127 Identities=8% Similarity=0.031 Sum_probs=65.1
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEc-CChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIAND-LDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGI 82 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD-~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~ 82 (648)
|.||--.+++..|... ...|+..+ .+..++..+...++..+. .+.....|..+...+. . .
T Consensus 39 as~GIG~aia~~la~~-------G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~--~---------~ 99 (271)
T 3v2g_A 39 GSRGIGAAIAKRLALE-------GAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIE--Q---------A 99 (271)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHH--H---------H
T ss_pred CCcHHHHHHHHHHHHC-------CCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHH--H---------H
Confidence 4567777777777642 23566664 456788888888877764 3455555544321110 0 0
Q ss_pred ccccccccccccEEEEcCCCCCCCcccc-CcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 83 ESESNMGQLLFDRVLCDVPCSGDGTLRK-APDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 83 ~~~~~~~~~~FDrILlDvPCSGdGtlrk-~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
...........|.++.-|--...+.+.. .++-|.+ .--.++ .--..+++.+++.++.+|++|+.+-+
T Consensus 100 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~---~~~vN~-~g~~~~~~~~~~~m~~~g~iv~isS~ 167 (271)
T 3v2g_A 100 IRETVEALGGLDILVNSAGIWHSAPLEETTVADFDE---VMAVNF-RAPFVAIRSASRHLGDGGRIITIGSN 167 (271)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHH---HHHHHT-HHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHH---HHHHHh-HHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence 0000011235788887554333232211 1111211 111111 12345677778888889999987654
No 398
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=23.65 E-value=2.7e+02 Score=26.87 Aligned_cols=127 Identities=13% Similarity=0.117 Sum_probs=63.9
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcC-ChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGI 82 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~-d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~ 82 (648)
|.||--.+++..|... ...|++.+. +..++..+.+.++..+. ++.....|..+...+.- .
T Consensus 26 as~gIG~aia~~l~~~-------G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~-----------~ 86 (270)
T 3is3_A 26 SGRGIGAAVAVHLGRL-------GAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVK-----------L 86 (270)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHH-----------H
T ss_pred CCchHHHHHHHHHHHC-------CCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHH-----------H
Confidence 4566677777777652 235666554 57778888888877764 34555556443211100 0
Q ss_pred ccccccccccccEEEEcCCCCCCCcccc-CcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEeccc
Q 006372 83 ESESNMGQLLFDRVLCDVPCSGDGTLRK-APDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCS 153 (648)
Q Consensus 83 ~~~~~~~~~~FDrILlDvPCSGdGtlrk-~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTCS 153 (648)
...........|.++.-+--...+.+.. .++-|.+ . ..--..-...+++.++..++.+|+||+.+-+
T Consensus 87 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~---~-~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 87 FDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDR---V-FSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHH---H-HHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHH---H-HHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 0000011235677765443222222111 1111211 1 1111122345677788888889999986553
No 399
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=23.57 E-value=2.7e+02 Score=27.47 Aligned_cols=126 Identities=11% Similarity=0.030 Sum_probs=63.1
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChH-HHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCcCc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQ-RCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDKGI 82 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~k-R~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~~~ 82 (648)
|.||--.+++..|... ...|+..+.+.. ....+.+.++..+. .+.+...|..+...+.- .
T Consensus 55 as~GIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~-----------~ 115 (291)
T 3ijr_A 55 GDSGIGRAVSIAFAKE-------GANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGDLSDEQHCKD-----------I 115 (291)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESCTTSHHHHHH-----------H
T ss_pred CCcHHHHHHHHHHHHC-------CCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHH-----------H
Confidence 5567777777777652 246888888765 45555555555553 45555566543211100 0
Q ss_pred ccccccccccccEEEEcCCCCCC-Cccc-cCcccccccCcchhhhhHHHHHHHHHHHhhccccCcEEEEecc
Q 006372 83 ESESNMGQLLFDRVLCDVPCSGD-GTLR-KAPDIWRKWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTC 152 (648)
Q Consensus 83 ~~~~~~~~~~FDrILlDvPCSGd-Gtlr-k~p~i~~kws~~~~~~L~~lQ~~IL~~Al~lLk~GG~LVYSTC 152 (648)
...........|.++.-+--... +.+. -.++-|.+ . ..--..-...+++.++.+++.+|+||+.+-
T Consensus 116 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~---~-~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 116 VQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEK---T-FRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp HHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHH---H-HHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred HHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHH---H-HHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 00000112357888775432111 1111 01111211 1 111122345677888888888999988653
No 400
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=23.57 E-value=82 Score=31.82 Aligned_cols=22 Identities=9% Similarity=0.071 Sum_probs=16.8
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCC
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTA 53 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~ 53 (648)
..|++.|.+..|+..++ ++|..
T Consensus 171 ~~Vi~~~~~~~~~~~~~----~~g~~ 192 (333)
T 1wly_A 171 ATVIGTVSTEEKAETAR----KLGCH 192 (333)
T ss_dssp CEEEEEESSHHHHHHHH----HHTCS
T ss_pred CEEEEEeCCHHHHHHHH----HcCCC
Confidence 47999999998888764 36654
No 401
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=23.36 E-value=1.8e+02 Score=28.12 Aligned_cols=53 Identities=9% Similarity=0.105 Sum_probs=35.5
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCC------------hHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLD------------VQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d------------~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.|.+ ..++..+...++..+. .+.+...|..+
T Consensus 21 as~gIG~~ia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 85 (278)
T 3sx2_A 21 AARGQGRAHAVRLAAD-------GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRD 85 (278)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTC
T ss_pred CCChHHHHHHHHHHHC-------CCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCC
Confidence 5567777788777652 2468888876 7777777777777664 45555566543
No 402
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=23.04 E-value=4.1e+02 Score=26.15 Aligned_cols=57 Identities=11% Similarity=0.031 Sum_probs=36.5
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhC-CCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMC-TANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg-~~nv~vtn~Da~~ 64 (648)
|.||--..++..|..... ..-.|+..+.+..++..+...+.... ...+.+...|..+
T Consensus 41 as~GIG~aia~~l~~~G~----~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d 98 (287)
T 3rku_A 41 ASAGIGKATALEYLEASN----GDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ 98 (287)
T ss_dssp TTSHHHHHHHHHHHHHHT----TCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC
T ss_pred CCChHHHHHHHHHHHcCC----CCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC
Confidence 456666677766543100 01178999999999998888876653 3456666666554
No 403
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=22.97 E-value=1.7e+02 Score=28.13 Aligned_cols=53 Identities=9% Similarity=0.076 Sum_probs=38.7
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.+.+..++..+...++..+. ++.+...|.++
T Consensus 15 as~GIG~aia~~l~~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 67 (252)
T 3h7a_A 15 AGDYIGAEIAKKFAAE-------GFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARN 67 (252)
T ss_dssp CSSHHHHHHHHHHHHT-------TCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCchHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCC
Confidence 5677777788777652 24799999999999999888887754 45666666544
No 404
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=22.79 E-value=78 Score=29.15 Aligned_cols=18 Identities=33% Similarity=0.621 Sum_probs=14.7
Q ss_pred HHHHhhccccCcEEEEec
Q 006372 134 AMRGISLLKVGGRIVYST 151 (648)
Q Consensus 134 L~~Al~lLk~GG~LVYST 151 (648)
+..++++|++||++|...
T Consensus 120 ~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 120 IQRGVQILAPGGRFIELG 137 (198)
T ss_dssp HHHHHHTEEEEEEEEECS
T ss_pred HHHHHHHhccCCEEEEEc
Confidence 567899999999988643
No 405
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=22.38 E-value=1.9e+02 Score=28.30 Aligned_cols=53 Identities=8% Similarity=0.095 Sum_probs=37.4
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|+..+.+..++..+...++..+. ++.+...|..+
T Consensus 34 as~gIG~aia~~la~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 86 (271)
T 4ibo_A 34 SSRGLGRAMAEGLAVA-------GARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTS 86 (271)
T ss_dssp CSSHHHHHHHHHHHHT-------TCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTC
T ss_pred CCcHHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCC
Confidence 5677777788777652 24789999999999988888877664 45555555443
No 406
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=22.33 E-value=1.7e+02 Score=28.79 Aligned_cols=54 Identities=2% Similarity=0.149 Sum_probs=36.7
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcC-ChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~-d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|+..+. +..++..+...+.......+.+...|..+
T Consensus 33 as~GIG~~ia~~la~~-------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d 87 (281)
T 3v2h_A 33 STSGIGLAIARTLAKA-------GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK 87 (281)
T ss_dssp CSSHHHHHHHHHHHHT-------TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTC
T ss_pred CCcHHHHHHHHHHHHC-------CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCC
Confidence 5677777888777652 247888898 67788888777766544556666666443
No 407
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=22.27 E-value=81 Score=36.26 Aligned_cols=42 Identities=19% Similarity=0.069 Sum_probs=29.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHH
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQ 46 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~ 46 (648)
++|+.||-+.-+.+...... ..=-.++|+|.|+.-++++++|
T Consensus 218 LFAG~GGls~Gfe~AG~~~~----~~f~vv~AvE~d~~A~~Ty~~N 259 (784)
T 4ft4_B 218 LYSGCGGMSTGLCLGAALSG----LKLETRWAVDFNSFACQSLKYN 259 (784)
T ss_dssp ETCTTSHHHHHHHHHHHHHT----EEEEEEEEEESCHHHHHHHHHH
T ss_pred eCcCccHHHHHHHHhCcccC----CceeEEEEEeCCHHHHHHHHHH
Confidence 47999999988755432100 0002689999999999998776
No 408
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=22.25 E-value=74 Score=32.67 Aligned_cols=25 Identities=4% Similarity=0.006 Sum_probs=17.2
Q ss_pred EEEEEEcCChHHHHHHHHHHHHhCCCcE
Q 006372 28 GMVIANDLDVQRCNLLIHQTKRMCTANL 55 (648)
Q Consensus 28 G~ViAnD~d~kR~~~L~~~lkRlg~~nv 55 (648)
..|++.|.+..|++.++ +++|...+
T Consensus 205 a~Vi~~~~~~~~~~~~~---~~lGa~~v 229 (357)
T 2cf5_A 205 HHVTVISSSNKKREEAL---QDLGADDY 229 (357)
T ss_dssp CEEEEEESSTTHHHHHH---TTSCCSCE
T ss_pred CeEEEEeCChHHHHHHH---HHcCCcee
Confidence 37899999888877653 25776543
No 409
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=21.71 E-value=1e+02 Score=38.17 Aligned_cols=91 Identities=7% Similarity=0.002 Sum_probs=50.5
Q ss_pred CcccchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeecccccCCCcccCCCCCCCCCc
Q 006372 1 MCAAPGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRANKNFSSASDK 80 (648)
Q Consensus 1 mCAAPGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~~p~~~~~~~~~~~~~~ 80 (648)
+||+.||-+.-+-.+ . -.-.|+|+|.+...+..+++|. +...+.+.|...+....+......
T Consensus 857 LFsG~GGlslGfe~A-G--------~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~gdi~~---- 918 (1330)
T 3av4_A 857 VFSGCGGLSEGFHQA-G--------ISETLWAIEMWDPAAQAFRLNN-----PGTTVFTEDCNVLLKLVMAGEVTN---- 918 (1330)
T ss_dssp ETCTTSHHHHHHHHT-T--------SEEEEEEECCSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHTTTCSBC----
T ss_pred cccCccHHHHHHHHC-C--------CCceEEEEECCHHHHHHHHHhC-----CCCcEeeccHHHHhHhhhccchhh----
Confidence 589999998876332 0 0125899999999999988763 443445554332210000000000
Q ss_pred CcccccccccccccEEEEcCCCCCCCcccc
Q 006372 81 GIESESNMGQLLFDRVLCDVPCSGDGTLRK 110 (648)
Q Consensus 81 ~~~~~~~~~~~~FDrILlDvPCSGdGtlrk 110 (648)
...........+|.|+.-+||-+--...+
T Consensus 919 -~~~~~lp~~~~vDvl~GGpPCQ~FS~agr 947 (1330)
T 3av4_A 919 -SLGQRLPQKGDVEMLCGGPPCQGFSGMNR 947 (1330)
T ss_dssp -SSCCBCCCTTTCSEEEECCCCTTTCSSSC
T ss_pred -hhhhhccccCccceEEecCCCcccccccc
Confidence 00000011246899999999988665543
No 410
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=21.38 E-value=2.9e+02 Score=26.18 Aligned_cols=53 Identities=9% Similarity=0.086 Sum_probs=35.7
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcC-ChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDL-DVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~-d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.+. +..++..+...++..+. .+.+...|..+
T Consensus 15 asggiG~~~a~~l~~~-------G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 68 (261)
T 1gee_A 15 SSTGLGKSMAIRFATE-------KAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTV 68 (261)
T ss_dssp CSSHHHHHHHHHHHHT-------TCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTS
T ss_pred CCChHHHHHHHHHHHC-------CCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCC
Confidence 5677777888777642 246888998 88888877777766553 45555556443
No 411
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=21.32 E-value=1.1e+02 Score=31.35 Aligned_cols=18 Identities=17% Similarity=0.152 Sum_probs=14.9
Q ss_pred HHHHhhccccCcEEEEec
Q 006372 134 AMRGISLLKVGGRIVYST 151 (648)
Q Consensus 134 L~~Al~lLk~GG~LVYST 151 (648)
+..++++|++||++|..-
T Consensus 256 ~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 256 AIQSVQALAPNGVGALLG 273 (357)
T ss_dssp HHHHHHHEEEEEEEEECC
T ss_pred HHHHHHHHhcCCEEEEEe
Confidence 677899999999988643
No 412
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=21.03 E-value=2.3e+02 Score=27.67 Aligned_cols=54 Identities=2% Similarity=-0.020 Sum_probs=36.6
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... .-.|++.+.+..++..+...++.....++.+...|..+
T Consensus 34 asggiG~~la~~L~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~ 87 (302)
T 1w6u_A 34 GGTGLGKGMTTLLSSL-------GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD 87 (302)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC
T ss_pred CCchHHHHHHHHHHHC-------CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC
Confidence 5677778888877652 23789999999888877776655422346666666543
No 413
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=20.43 E-value=61 Score=28.94 Aligned_cols=28 Identities=7% Similarity=-0.054 Sum_probs=22.4
Q ss_pred EEEEEcCChHHHHHHHHHHHHhCCCcEE
Q 006372 29 MVIANDLDVQRCNLLIHQTKRMCTANLI 56 (648)
Q Consensus 29 ~ViAnD~d~kR~~~L~~~lkRlg~~nv~ 56 (648)
.|..+|=++.=...|++.++++|...+.
T Consensus 14 rILiVDD~~~~r~~l~~~L~~~G~~~v~ 41 (134)
T 3to5_A 14 KILIVDDFSTMRRIVKNLLRDLGFNNTQ 41 (134)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTTCCCEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCcEEE
Confidence 5777887888888999999999976543
No 414
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=20.04 E-value=2.6e+02 Score=27.02 Aligned_cols=53 Identities=6% Similarity=-0.070 Sum_probs=37.7
Q ss_pred cchHHHHHHHHHHhcCCCCCCCCCEEEEEEcCChHHHHHHHHHHHHhCCCcEEEeeccccc
Q 006372 4 APGSKTFQLLEIIHQSTNPGALPNGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQH 64 (648)
Q Consensus 4 APGgKT~qlae~l~~~~~~~~~~~G~ViAnD~d~kR~~~L~~~lkRlg~~nv~vtn~Da~~ 64 (648)
|.||--.+++..|... ...|++.+.+..++..+...++..+. ++.+...|..+
T Consensus 39 asggIG~~la~~L~~~-------G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~ 91 (272)
T 1yb1_A 39 AGHGIGRLTAYEFAKL-------KSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSN 91 (272)
T ss_dssp TTSHHHHHHHHHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCchHHHHHHHHHHHC-------CCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCC
Confidence 5677778888877652 24789999999998888877776653 45556566543
Done!