Query 006375
Match_columns 648
No_of_seqs 365 out of 3951
Neff 9.8
Searched_HMMs 46136
Date Thu Mar 28 22:22:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006375.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006375hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1770 PtrB Protease II [Amin 100.0 3E-110 7E-115 850.9 64.1 612 1-639 65-681 (682)
2 PRK10115 protease 2; Provision 100.0 4.3E-93 9.3E-98 783.7 76.3 615 1-640 61-679 (686)
3 KOG2237 Predicted serine prote 100.0 8.4E-91 1.8E-95 701.4 45.1 623 1-641 63-710 (712)
4 COG1505 Serine proteases of th 100.0 9.8E-73 2.1E-77 568.6 45.7 580 11-638 51-648 (648)
5 COG1506 DAP2 Dipeptidyl aminop 100.0 2.1E-44 4.5E-49 396.0 50.1 522 83-639 62-619 (620)
6 PF02897 Peptidase_S9_N: Proly 100.0 2.5E-41 5.5E-46 358.9 41.0 338 1-361 58-412 (414)
7 PF00326 Peptidase_S9: Prolyl 100.0 1.3E-32 2.8E-37 264.5 15.4 211 422-639 1-212 (213)
8 KOG2100 Dipeptidyl aminopeptid 100.0 8.9E-28 1.9E-32 265.8 46.0 342 276-640 398-751 (755)
9 KOG2281 Dipeptidyl aminopeptid 100.0 3.3E-28 7.2E-33 246.0 30.8 329 280-635 518-866 (867)
10 PRK13604 luxD acyl transferase 99.9 2.3E-21 5.1E-26 189.1 18.5 226 374-618 7-248 (307)
11 COG3458 Acetyl esterase (deace 99.9 1E-20 2.2E-25 174.1 15.9 248 369-638 49-319 (321)
12 PRK10566 esterase; Provisional 99.8 4.7E-20 1E-24 182.1 19.1 233 389-637 12-249 (249)
13 PLN02298 hydrolase, alpha/beta 99.8 1E-19 2.3E-24 187.3 22.4 260 371-644 27-325 (330)
14 PRK05077 frsA fermentation/res 99.8 3.6E-19 7.7E-24 186.5 22.4 240 373-637 165-413 (414)
15 PF05448 AXE1: Acetyl xylan es 99.8 4.7E-20 1E-24 184.8 13.7 246 372-636 52-320 (320)
16 PLN02442 S-formylglutathione h 99.8 2E-18 4.3E-23 172.4 21.5 223 376-614 18-262 (283)
17 PRK04792 tolB translocation pr 99.8 5.3E-17 1.2E-21 172.7 31.1 206 83-303 220-428 (448)
18 TIGR02821 fghA_ester_D S-formy 99.8 6.6E-18 1.4E-22 168.4 21.9 241 377-637 14-275 (275)
19 PRK10162 acetyl esterase; Prov 99.8 1E-17 2.2E-22 170.4 23.2 234 375-638 56-317 (318)
20 PRK04043 tolB translocation pr 99.8 7.7E-17 1.7E-21 168.8 29.3 203 84-298 191-400 (419)
21 KOG1552 Predicted alpha/beta h 99.8 5.6E-18 1.2E-22 157.1 17.7 210 375-626 34-245 (258)
22 PRK01029 tolB translocation pr 99.8 8.7E-17 1.9E-21 169.7 28.2 207 84-298 188-403 (428)
23 PLN02385 hydrolase; alpha/beta 99.8 1E-17 2.2E-22 173.6 20.7 251 374-638 59-347 (349)
24 PRK05137 tolB translocation pr 99.8 1.7E-16 3.6E-21 169.3 29.9 203 83-298 204-412 (435)
25 TIGR02800 propeller_TolB tol-p 99.8 1.6E-16 3.5E-21 169.5 29.4 248 13-298 147-397 (417)
26 COG1647 Esterase/lipase [Gener 99.8 2E-18 4.4E-23 154.8 12.2 211 406-634 15-242 (243)
27 TIGR01840 esterase_phb esteras 99.8 6.2E-18 1.3E-22 162.0 16.2 192 392-596 2-197 (212)
28 PRK03629 tolB translocation pr 99.8 7.9E-16 1.7E-20 163.1 31.9 207 82-303 200-409 (429)
29 PRK04043 tolB translocation pr 99.8 7.9E-16 1.7E-20 161.2 30.4 240 93-356 155-403 (419)
30 COG0412 Dienelactone hydrolase 99.8 7.5E-17 1.6E-21 155.2 20.5 216 377-638 3-235 (236)
31 PF01738 DLH: Dienelactone hyd 99.7 4.6E-18 1E-22 163.8 11.2 205 389-637 1-218 (218)
32 PRK02889 tolB translocation pr 99.7 1E-15 2.3E-20 162.4 30.1 203 83-298 198-403 (427)
33 PRK05371 x-prolyl-dipeptidyl a 99.7 1.5E-16 3.2E-21 177.5 24.2 260 368-639 162-522 (767)
34 PHA02857 monoglyceride lipase; 99.7 1E-16 2.2E-21 160.8 19.7 236 382-636 6-273 (276)
35 PRK00178 tolB translocation pr 99.7 2E-15 4.3E-20 161.3 30.3 203 83-298 201-406 (430)
36 KOG1455 Lysophospholipase [Lip 99.7 2.3E-16 5E-21 149.3 19.6 247 376-636 27-312 (313)
37 PRK01029 tolB translocation pr 99.7 2E-15 4.3E-20 159.4 29.0 252 85-357 141-407 (428)
38 PRK05137 tolB translocation pr 99.7 2.7E-15 5.9E-20 160.0 29.5 246 91-357 164-416 (435)
39 PRK10749 lysophospholipase L2; 99.7 3.7E-16 8E-21 160.4 22.0 246 377-636 31-329 (330)
40 PRK04922 tolB translocation pr 99.7 4.8E-15 1.1E-19 157.9 30.5 203 83-298 206-411 (433)
41 COG0657 Aes Esterase/lipase [L 99.7 2.6E-16 5.6E-21 160.4 17.0 229 383-635 58-309 (312)
42 PLN02652 hydrolase; alpha/beta 99.7 4.8E-15 1E-19 154.1 22.5 244 376-639 110-390 (395)
43 PRK03629 tolB translocation pr 99.7 3.8E-14 8.2E-19 150.3 28.9 242 93-356 164-409 (429)
44 PF02129 Peptidase_S15: X-Pro 99.7 2.6E-16 5.7E-21 156.8 11.0 210 385-605 1-266 (272)
45 PRK11460 putative hydrolase; P 99.7 2.3E-15 5E-20 145.7 17.1 186 404-638 14-210 (232)
46 TIGR00976 /NonD putative hydro 99.7 3.4E-15 7.4E-20 163.5 19.9 135 381-525 1-137 (550)
47 PRK02889 tolB translocation pr 99.7 8.3E-14 1.8E-18 147.9 29.4 239 93-355 164-405 (427)
48 PRK04792 tolB translocation pr 99.7 3.5E-14 7.6E-19 151.2 25.8 159 85-254 266-426 (448)
49 PRK01742 tolB translocation pr 99.7 9.8E-14 2.1E-18 147.5 29.3 198 82-298 205-404 (429)
50 PRK04922 tolB translocation pr 99.6 8.3E-14 1.8E-18 148.4 28.5 243 92-356 167-414 (433)
51 KOG1515 Arylacetamide deacetyl 99.6 1.4E-14 3.1E-19 144.3 20.8 235 376-635 63-334 (336)
52 PRK00178 tolB translocation pr 99.6 1.5E-13 3.2E-18 146.9 28.5 253 81-356 152-409 (430)
53 COG2267 PldB Lysophospholipase 99.6 1.9E-14 4.2E-19 143.8 19.2 243 377-638 10-296 (298)
54 KOG4391 Predicted alpha/beta h 99.6 6.8E-15 1.5E-19 130.9 13.6 234 373-639 51-285 (300)
55 PRK10985 putative hydrolase; P 99.6 1.9E-14 4.2E-19 147.3 19.1 244 377-638 32-322 (324)
56 PF10503 Esterase_phd: Esteras 99.6 1.4E-14 3.1E-19 136.1 16.1 194 391-596 3-198 (220)
57 PF07859 Abhydrolase_3: alpha/ 99.6 1.9E-15 4E-20 145.1 10.5 187 409-615 1-209 (211)
58 PLN02511 hydrolase 99.6 2.6E-14 5.7E-19 149.3 19.8 248 375-639 70-368 (388)
59 PF06500 DUF1100: Alpha/beta h 99.6 3.2E-14 7E-19 143.4 14.8 239 373-637 162-410 (411)
60 TIGR03343 biphenyl_bphD 2-hydr 99.6 3.1E-14 6.7E-19 143.3 14.6 209 406-634 30-281 (282)
61 TIGR03611 RutD pyrimidine util 99.6 6.2E-14 1.3E-18 138.7 15.8 207 405-633 12-255 (257)
62 PF12695 Abhydrolase_5: Alpha/ 99.6 2.1E-14 4.6E-19 128.7 11.3 145 408-614 1-145 (145)
63 PF12715 Abhydrolase_7: Abhydr 99.6 2.4E-15 5.2E-20 148.5 5.3 143 372-519 84-259 (390)
64 PRK00870 haloalkane dehalogena 99.5 6.3E-13 1.4E-17 135.1 21.5 238 376-636 21-301 (302)
65 COG4099 Predicted peptidase [G 99.5 9.2E-14 2E-18 129.8 12.7 178 384-606 169-354 (387)
66 COG0823 TolB Periplasmic compo 99.5 1.7E-12 3.8E-17 135.0 21.8 207 81-298 193-402 (425)
67 PRK01742 tolB translocation pr 99.5 1.4E-11 3E-16 131.1 29.4 235 92-355 168-406 (429)
68 TIGR01607 PST-A Plasmodium sub 99.5 4.3E-13 9.2E-18 137.4 16.9 241 381-634 2-331 (332)
69 PF02230 Abhydrolase_2: Phosph 99.5 1E-13 2.2E-18 133.2 11.5 190 404-637 12-216 (216)
70 TIGR02800 propeller_TolB tol-p 99.5 1.6E-11 3.4E-16 131.1 29.5 245 89-355 152-399 (417)
71 COG0429 Predicted hydrolase of 99.5 1.5E-12 3.3E-17 125.3 18.6 240 380-638 53-342 (345)
72 PLN02872 triacylglycerol lipas 99.5 1.5E-13 3.3E-18 142.2 12.7 146 371-520 39-197 (395)
73 PLN00021 chlorophyllase 99.5 2.9E-12 6.2E-17 128.7 21.2 207 387-640 37-287 (313)
74 COG3509 LpqC Poly(3-hydroxybut 99.5 1E-12 2.2E-17 124.2 16.2 129 384-520 42-179 (312)
75 PLN02824 hydrolase, alpha/beta 99.5 1.1E-12 2.3E-17 132.9 16.9 214 406-635 29-293 (294)
76 PRK11071 esterase YqiA; Provis 99.5 9.2E-13 2E-17 123.1 14.8 171 407-615 2-174 (190)
77 TIGR02240 PHA_depoly_arom poly 99.5 1.5E-12 3.3E-17 130.5 16.9 206 407-636 26-266 (276)
78 COG0823 TolB Periplasmic compo 99.5 3.3E-12 7.1E-17 132.9 19.6 161 84-254 241-403 (425)
79 TIGR01250 pro_imino_pep_2 prol 99.5 2.3E-12 4.9E-17 129.7 17.5 108 405-520 24-131 (288)
80 PLN02965 Probable pheophorbida 99.5 5.1E-12 1.1E-16 125.1 19.5 198 408-625 5-244 (255)
81 TIGR03056 bchO_mg_che_rel puta 99.4 3.8E-12 8.3E-17 127.6 18.5 206 406-633 28-277 (278)
82 TIGR02427 protocat_pcaD 3-oxoa 99.4 7.8E-13 1.7E-17 129.9 13.0 199 405-624 12-243 (251)
83 COG2945 Predicted hydrolase of 99.4 2.4E-12 5.3E-17 113.4 14.4 198 377-634 5-205 (210)
84 PF00930 DPPIV_N: Dipeptidyl p 99.4 8.5E-12 1.8E-16 129.1 20.3 243 83-345 45-353 (353)
85 PRK03592 haloalkane dehalogena 99.4 8.4E-12 1.8E-16 126.4 19.5 101 406-519 27-127 (295)
86 PRK10673 acyl-CoA esterase; Pr 99.4 2.4E-12 5.2E-17 127.4 14.7 208 404-635 14-254 (255)
87 TIGR03100 hydr1_PEP hydrolase, 99.4 6.8E-12 1.5E-16 125.1 17.9 131 377-521 3-135 (274)
88 PLN02679 hydrolase, alpha/beta 99.4 3.5E-12 7.6E-17 132.5 16.4 212 406-635 88-356 (360)
89 KOG1838 Alpha/beta hydrolase [ 99.4 1.9E-11 4.2E-16 122.4 20.7 199 375-584 92-339 (409)
90 TIGR03695 menH_SHCHC 2-succiny 99.4 7.9E-12 1.7E-16 122.5 17.8 104 407-521 2-106 (251)
91 TIGR01249 pro_imino_pep_1 prol 99.4 8.7E-12 1.9E-16 126.8 18.4 122 380-519 8-129 (306)
92 PLN03087 BODYGUARD 1 domain co 99.4 6.6E-12 1.4E-16 132.4 17.7 125 380-519 179-308 (481)
93 TIGR01836 PHA_synth_III_C poly 99.4 6.2E-12 1.4E-16 130.3 16.7 110 405-523 62-174 (350)
94 PLN02894 hydrolase, alpha/beta 99.4 2.2E-11 4.7E-16 127.9 20.5 106 405-519 104-210 (402)
95 TIGR03101 hydr2_PEP hydrolase, 99.4 4.2E-11 9.1E-16 117.0 20.2 214 379-606 3-241 (266)
96 PRK06489 hypothetical protein; 99.4 3.7E-12 8.1E-17 132.5 13.7 110 406-519 69-188 (360)
97 PRK03204 haloalkane dehalogena 99.4 1.9E-11 4.1E-16 122.9 18.3 102 406-519 34-135 (286)
98 KOG4178 Soluble epoxide hydrol 99.4 5E-11 1.1E-15 115.4 20.1 103 404-517 42-145 (322)
99 COG0400 Predicted esterase [Ge 99.4 1.1E-11 2.4E-16 115.3 15.0 186 404-637 16-206 (207)
100 TIGR01392 homoserO_Ac_trn homo 99.4 1.7E-11 3.6E-16 127.2 18.0 113 406-520 31-162 (351)
101 TIGR01738 bioH putative pimelo 99.4 5.4E-12 1.2E-16 123.5 13.3 194 406-625 4-239 (245)
102 PRK14875 acetoin dehydrogenase 99.4 9.7E-12 2.1E-16 130.5 15.8 102 405-519 130-231 (371)
103 PF12697 Abhydrolase_6: Alpha/ 99.4 5.2E-13 1.1E-17 128.9 4.8 193 409-620 1-222 (228)
104 PLN02211 methyl indole-3-aceta 99.3 4.3E-11 9.2E-16 119.2 18.2 106 404-519 16-121 (273)
105 PRK00175 metX homoserine O-ace 99.3 2.5E-11 5.5E-16 126.9 17.2 224 406-636 48-374 (379)
106 COG2936 Predicted acyl esteras 99.3 2.6E-11 5.6E-16 126.7 16.6 210 374-596 17-279 (563)
107 PRK10349 carboxylesterase BioH 99.3 1.3E-11 2.9E-16 122.2 13.9 194 406-625 13-247 (256)
108 PRK07581 hypothetical protein; 99.3 8.3E-12 1.8E-16 129.1 12.2 111 405-518 40-157 (339)
109 PRK11126 2-succinyl-6-hydroxy- 99.3 7.9E-11 1.7E-15 115.5 16.5 99 407-520 3-102 (242)
110 PLN02578 hydrolase 99.3 9E-11 2E-15 121.8 17.4 95 407-518 87-185 (354)
111 PF00930 DPPIV_N: Dipeptidyl p 99.3 5.3E-10 1.2E-14 115.8 22.5 200 84-287 104-349 (353)
112 PRK08775 homoserine O-acetyltr 99.3 1.1E-10 2.3E-15 120.8 17.1 185 431-635 95-338 (343)
113 PF08840 BAAT_C: BAAT / Acyl-C 99.2 8.2E-11 1.8E-15 111.9 13.4 144 466-615 3-163 (213)
114 PF03583 LIP: Secretory lipase 99.2 2E-10 4.3E-15 114.5 15.0 201 428-643 19-288 (290)
115 KOG4627 Kynurenine formamidase 99.2 1.3E-10 2.7E-15 103.2 10.0 199 404-637 65-268 (270)
116 KOG4667 Predicted esterase [Li 99.2 9.3E-10 2E-14 98.6 15.4 217 377-618 11-243 (269)
117 KOG4409 Predicted hydrolase/ac 99.2 1.6E-09 3.4E-14 105.4 17.8 204 405-625 89-355 (365)
118 KOG3101 Esterase D [General fu 99.2 8.5E-11 1.9E-15 104.6 8.3 210 387-613 26-260 (283)
119 PLN03084 alpha/beta hydrolase 99.2 6.2E-10 1.3E-14 115.3 15.8 106 406-520 127-232 (383)
120 PF00756 Esterase: Putative es 99.2 3.8E-11 8.2E-16 118.5 6.1 136 386-523 5-153 (251)
121 PRK10439 enterobactin/ferric e 99.1 7.3E-09 1.6E-13 108.1 21.5 202 377-614 181-391 (411)
122 KOG1454 Predicted hydrolase/ac 99.1 9.8E-10 2.1E-14 111.2 14.3 214 404-637 56-325 (326)
123 PLN02980 2-oxoglutarate decarb 99.1 2.2E-09 4.7E-14 130.6 19.6 235 389-637 1356-1640(1655)
124 PRK06765 homoserine O-acetyltr 99.1 1.2E-09 2.7E-14 113.3 14.1 225 404-635 54-387 (389)
125 cd00312 Esterase_lipase Estera 99.0 5.3E-10 1.2E-14 121.8 9.7 129 389-522 79-215 (493)
126 KOG3043 Predicted hydrolase re 99.0 3.6E-09 7.8E-14 96.0 12.2 183 408-637 41-241 (242)
127 COG0627 Predicted esterase [Ge 99.0 5.3E-09 1.2E-13 104.0 14.4 225 403-640 51-315 (316)
128 PF12740 Chlorophyllase2: Chlo 98.9 5.7E-09 1.2E-13 99.5 10.8 115 389-520 4-131 (259)
129 PF14583 Pectate_lyase22: Olig 98.9 2.2E-06 4.7E-11 86.1 29.4 203 84-298 39-270 (386)
130 COG2272 PnbA Carboxylesterase 98.9 2.6E-09 5.7E-14 108.9 8.9 126 389-521 80-218 (491)
131 PRK05855 short chain dehydroge 98.9 1.5E-08 3.3E-13 113.1 15.9 107 382-505 8-114 (582)
132 PF05728 UPF0227: Uncharacteri 98.9 1.2E-08 2.5E-13 94.0 12.1 182 408-633 1-186 (187)
133 TIGR01838 PHA_synth_I poly(R)- 98.9 3.3E-08 7.1E-13 105.7 16.2 108 407-522 189-304 (532)
134 PF08662 eIF2A: Eukaryotic tra 98.9 1.6E-07 3.6E-12 87.9 18.4 145 84-238 9-163 (194)
135 COG4946 Uncharacterized protei 98.9 3.1E-07 6.6E-12 91.5 20.5 243 83-357 39-299 (668)
136 PF03403 PAF-AH_p_II: Platelet 98.9 2.3E-08 5E-13 103.2 12.7 114 403-519 97-261 (379)
137 TIGR03866 PQQ_ABC_repeats PQQ- 98.8 6.9E-06 1.5E-10 83.0 29.3 239 84-356 34-282 (300)
138 KOG2624 Triglyceride lipase-ch 98.8 1.2E-07 2.7E-12 96.9 16.2 142 371-520 43-199 (403)
139 PF00561 Abhydrolase_1: alpha/ 98.8 3.1E-09 6.8E-14 103.0 4.2 78 436-519 1-78 (230)
140 PF06342 DUF1057: Alpha/beta h 98.8 3.6E-07 7.8E-12 86.8 16.8 205 376-595 6-240 (297)
141 PF10340 DUF2424: Protein of u 98.7 5.8E-07 1.3E-11 90.4 17.8 204 391-616 108-351 (374)
142 PRK07868 acyl-CoA synthetase; 98.7 2.2E-07 4.7E-12 109.4 17.1 105 406-522 67-179 (994)
143 PF00135 COesterase: Carboxyle 98.7 3.7E-08 8E-13 108.8 9.9 126 389-519 109-244 (535)
144 cd00707 Pancreat_lipase_like P 98.7 8.5E-08 1.8E-12 95.2 10.0 112 404-520 34-147 (275)
145 KOG0293 WD40 repeat-containing 98.7 4.6E-06 1E-10 81.9 20.8 242 83-357 227-474 (519)
146 COG4946 Uncharacterized protei 98.7 2.4E-05 5.2E-10 78.3 26.0 249 14-286 228-509 (668)
147 COG4757 Predicted alpha/beta h 98.6 3.4E-07 7.4E-12 83.5 11.7 224 379-616 8-264 (281)
148 COG3571 Predicted hydrolase of 98.6 4E-06 8.8E-11 71.9 16.7 162 407-613 15-180 (213)
149 PF06821 Ser_hydrolase: Serine 98.6 5.3E-07 1.2E-11 82.2 12.4 110 484-625 54-164 (171)
150 PF08538 DUF1749: Protein of u 98.6 2.3E-07 4.9E-12 90.3 10.5 198 405-616 32-283 (303)
151 PRK13616 lipoprotein LpqB; Pro 98.6 3.4E-06 7.3E-11 92.0 20.8 159 82-255 351-529 (591)
152 COG2706 3-carboxymuconate cycl 98.6 8.2E-05 1.8E-09 72.7 27.5 262 82-359 41-329 (346)
153 KOG3847 Phospholipase A2 (plat 98.6 9.3E-07 2E-11 84.2 12.9 115 402-519 114-274 (399)
154 KOG2564 Predicted acetyltransf 98.5 3.7E-07 8.1E-12 85.6 9.2 116 376-505 50-166 (343)
155 KOG0293 WD40 repeat-containing 98.5 3.8E-06 8.2E-11 82.5 15.7 195 81-298 270-470 (519)
156 TIGR03866 PQQ_ABC_repeats PQQ- 98.5 6.3E-05 1.4E-09 75.9 25.9 193 84-299 76-280 (300)
157 COG4188 Predicted dienelactone 98.5 5.1E-07 1.1E-11 89.4 10.0 131 376-508 38-182 (365)
158 PF02897 Peptidase_S9_N: Proly 98.5 0.00015 3.3E-09 77.2 29.8 248 19-299 133-405 (414)
159 PRK11028 6-phosphogluconolacto 98.5 0.00011 2.4E-09 75.6 27.8 251 84-356 38-309 (330)
160 KOG0318 WD40 repeat stress pro 98.5 0.00026 5.7E-09 72.1 28.4 203 80-298 59-308 (603)
161 COG2021 MET2 Homoserine acetyl 98.5 4.1E-06 9E-11 82.9 15.2 113 404-518 49-180 (368)
162 TIGR03230 lipo_lipase lipoprot 98.4 1.1E-06 2.5E-11 91.2 11.1 112 404-519 39-153 (442)
163 PF14583 Pectate_lyase22: Olig 98.4 0.00034 7.3E-09 70.6 28.0 161 85-255 85-274 (386)
164 PF07224 Chlorophyllase: Chlor 98.4 1.1E-06 2.3E-11 82.1 9.5 118 387-521 31-158 (307)
165 KOG2382 Predicted alpha/beta h 98.4 2.5E-06 5.4E-11 83.3 12.5 213 404-636 50-313 (315)
166 KOG2112 Lysophospholipase [Lip 98.4 6E-06 1.3E-10 75.0 13.8 187 407-635 4-203 (206)
167 KOG2984 Predicted hydrolase [G 98.4 4.1E-07 8.9E-12 81.0 5.9 209 408-635 44-275 (277)
168 COG2706 3-carboxymuconate cycl 98.4 0.00088 1.9E-08 65.7 28.8 224 64-304 76-327 (346)
169 PF10282 Lactonase: Lactonase, 98.4 0.00011 2.3E-09 76.0 24.6 202 85-304 91-328 (345)
170 PF08662 eIF2A: Eukaryotic tra 98.4 1E-05 2.2E-10 75.8 15.1 116 82-208 61-180 (194)
171 COG3208 GrsT Predicted thioest 98.4 1.2E-05 2.6E-10 75.2 14.9 174 435-638 33-234 (244)
172 TIGR01839 PHA_synth_II poly(R) 98.4 1E-05 2.2E-10 85.9 16.2 84 426-522 238-330 (560)
173 KOG0279 G protein beta subunit 98.4 0.00021 4.6E-09 67.1 22.7 194 81-299 64-263 (315)
174 PF02239 Cytochrom_D1: Cytochr 98.4 0.00065 1.4E-08 70.4 29.0 253 83-356 39-305 (369)
175 COG0596 MhpC Predicted hydrola 98.3 8.2E-06 1.8E-10 80.0 14.2 101 406-520 21-123 (282)
176 PF08450 SGL: SMP-30/Gluconola 98.3 0.0006 1.3E-08 66.8 27.2 223 85-339 4-245 (246)
177 cd00200 WD40 WD40 domain, foun 98.3 0.00062 1.3E-08 67.3 27.3 236 82-356 11-252 (289)
178 PF09752 DUF2048: Uncharacteri 98.3 3.5E-05 7.6E-10 76.4 17.2 122 391-518 79-208 (348)
179 PF02273 Acyl_transf_2: Acyl t 98.3 2.6E-06 5.6E-11 78.6 8.6 215 381-617 7-240 (294)
180 PF10282 Lactonase: Lactonase, 98.3 0.00088 1.9E-08 69.3 27.5 258 84-358 40-329 (345)
181 COG2382 Fes Enterochelin ester 98.2 8.5E-06 1.8E-10 78.5 10.7 191 387-615 80-281 (299)
182 KOG1553 Predicted alpha/beta h 98.2 8.7E-06 1.9E-10 78.5 10.5 134 377-525 215-350 (517)
183 KOG0272 U4/U6 small nuclear ri 98.2 4.6E-05 9.9E-10 75.4 15.5 194 62-278 239-441 (459)
184 PF11339 DUF3141: Protein of u 98.2 9.5E-05 2.1E-09 76.1 18.2 101 404-519 67-175 (581)
185 PTZ00421 coronin; Provisional 98.2 0.00055 1.2E-08 73.6 24.7 199 82-298 77-290 (493)
186 COG3545 Predicted esterase of 98.2 6.6E-05 1.4E-09 66.3 14.4 123 460-617 37-159 (181)
187 TIGR02658 TTQ_MADH_Hv methylam 98.2 0.0016 3.4E-08 66.2 26.5 239 87-356 52-333 (352)
188 PRK11028 6-phosphogluconolacto 98.2 0.00056 1.2E-08 70.4 23.9 201 84-302 83-308 (330)
189 KOG0291 WD40-repeat-containing 98.2 0.00025 5.4E-09 75.3 20.6 197 80-298 350-550 (893)
190 KOG2551 Phospholipase/carboxyh 98.2 9.6E-05 2.1E-09 67.8 15.5 126 465-638 87-222 (230)
191 COG1073 Hydrolases of the alph 98.2 1.6E-05 3.5E-10 80.2 11.8 238 387-637 31-298 (299)
192 PF03959 FSH1: Serine hydrolas 98.1 4.1E-06 8.8E-11 79.9 6.7 171 405-618 3-205 (212)
193 KOG0318 WD40 repeat stress pro 98.1 0.00039 8.5E-09 70.9 19.9 194 81-298 191-392 (603)
194 TIGR02658 TTQ_MADH_Hv methylam 98.1 0.00086 1.9E-08 68.1 22.6 193 85-299 109-331 (352)
195 KOG0266 WD40 repeat-containing 98.1 0.00098 2.1E-08 71.6 24.2 153 80-254 203-365 (456)
196 KOG0291 WD40-repeat-containing 98.1 0.0033 7.2E-08 67.1 26.9 239 81-356 308-553 (893)
197 PF05677 DUF818: Chlamydia CHL 98.1 3.5E-05 7.6E-10 75.4 11.6 118 375-506 111-236 (365)
198 PTZ00420 coronin; Provisional 98.1 0.011 2.4E-07 64.2 32.0 201 87-299 33-249 (568)
199 PF02239 Cytochrom_D1: Cytochr 98.1 0.0038 8.1E-08 64.8 27.1 250 83-356 80-350 (369)
200 COG3386 Gluconolactonase [Carb 98.1 0.002 4.3E-08 64.5 23.9 242 85-356 29-291 (307)
201 PRK10115 protease 2; Provision 98.0 0.0063 1.4E-07 68.6 30.5 247 18-298 135-394 (686)
202 KOG2314 Translation initiation 98.0 0.00092 2E-08 68.7 21.2 222 64-299 282-526 (698)
203 KOG0315 G-protein beta subunit 98.0 0.00074 1.6E-08 62.6 18.6 149 80-239 40-236 (311)
204 PF06028 DUF915: Alpha/beta hy 98.0 0.00016 3.5E-09 70.1 14.8 211 408-634 13-253 (255)
205 KOG0271 Notchless-like WD40 re 98.0 0.00074 1.6E-08 66.2 18.9 126 78-219 114-247 (480)
206 TIGR03502 lipase_Pla1_cef extr 98.0 3.8E-05 8.3E-10 85.2 11.7 99 405-505 448-575 (792)
207 PRK13616 lipoprotein LpqB; Pro 98.0 0.00061 1.3E-08 74.6 20.9 116 83-210 399-530 (591)
208 PTZ00420 coronin; Provisional 98.0 0.004 8.6E-08 67.7 26.6 199 81-298 75-293 (568)
209 COG2819 Predicted hydrolase of 98.0 0.00051 1.1E-08 65.6 17.2 51 470-520 121-172 (264)
210 KOG2139 WD40 repeat protein [G 98.0 0.00022 4.8E-09 69.3 14.9 123 63-207 185-311 (445)
211 cd00200 WD40 WD40 domain, foun 98.0 0.0038 8.2E-08 61.5 24.3 193 82-299 53-250 (289)
212 TIGR01849 PHB_depoly_PhaZ poly 97.9 0.00023 5E-09 73.4 15.3 85 427-523 122-211 (406)
213 KOG1516 Carboxylesterase and r 97.9 1.6E-05 3.5E-10 87.8 7.3 125 389-519 97-231 (545)
214 KOG2055 WD40 repeat protein [G 97.9 0.00022 4.8E-09 71.5 14.2 157 80-251 303-467 (514)
215 KOG4497 Uncharacterized conser 97.9 0.0002 4.2E-09 68.8 13.2 189 86-298 14-210 (447)
216 KOG1446 Histone H3 (Lys4) meth 97.8 0.0061 1.3E-07 58.7 21.6 195 81-297 101-302 (311)
217 PRK04940 hypothetical protein; 97.8 0.00019 4.2E-09 64.8 11.0 118 485-634 60-178 (180)
218 KOG1407 WD40 repeat protein [F 97.8 0.0018 3.9E-08 60.5 17.2 188 82-285 66-290 (313)
219 PTZ00421 coronin; Provisional 97.8 0.0047 1E-07 66.5 22.7 160 81-254 126-291 (493)
220 KOG0772 Uncharacterized conser 97.8 0.0084 1.8E-07 61.3 22.5 254 76-356 163-448 (641)
221 KOG0266 WD40 repeat-containing 97.7 0.0062 1.4E-07 65.4 22.1 199 80-298 159-364 (456)
222 KOG1273 WD40 repeat protein [G 97.7 0.015 3.2E-07 56.0 21.5 148 84-255 27-185 (405)
223 PF05577 Peptidase_S28: Serine 97.7 0.00015 3.3E-09 77.5 9.5 128 388-521 13-149 (434)
224 PF11144 DUF2920: Protein of u 97.7 0.00084 1.8E-08 68.1 13.8 168 467-638 164-369 (403)
225 PF10647 Gmad1: Lipoprotein Lp 97.6 0.0086 1.9E-07 58.7 20.2 156 80-242 23-188 (253)
226 COG3243 PhaC Poly(3-hydroxyalk 97.6 0.00031 6.7E-09 70.8 9.8 90 426-523 130-220 (445)
227 PF07519 Tannase: Tannase and 97.6 0.002 4.3E-08 68.9 16.6 128 388-521 16-151 (474)
228 PF12146 Hydrolase_4: Putative 97.6 0.00022 4.7E-09 55.6 6.7 77 386-476 1-77 (79)
229 KOG2096 WD40 repeat protein [G 97.6 0.015 3.2E-07 56.1 20.0 263 69-356 77-363 (420)
230 KOG2139 WD40 repeat protein [G 97.6 0.006 1.3E-07 59.7 17.4 199 81-298 99-311 (445)
231 COG3150 Predicted esterase [Ge 97.5 0.0026 5.6E-08 55.6 13.1 115 467-594 43-161 (191)
232 PF10142 PhoPQ_related: PhoPQ- 97.5 0.0084 1.8E-07 61.1 19.1 160 471-643 158-327 (367)
233 COG5354 Uncharacterized protei 97.5 0.012 2.6E-07 60.2 19.8 195 85-298 136-348 (561)
234 KOG0973 Histone transcription 97.5 0.0017 3.6E-08 72.1 14.9 142 80-236 69-237 (942)
235 PF06057 VirJ: Bacterial virul 97.5 0.001 2.3E-08 60.3 11.0 128 427-580 21-152 (192)
236 PLN00181 protein SPA1-RELATED; 97.5 0.091 2E-06 61.0 29.1 194 81-298 484-690 (793)
237 KOG0305 Anaphase promoting com 97.5 0.011 2.4E-07 62.0 19.1 198 81-299 218-420 (484)
238 KOG0271 Notchless-like WD40 re 97.5 0.00058 1.3E-08 67.0 9.0 112 65-190 347-467 (480)
239 PF06433 Me-amine-dh_H: Methyl 97.5 0.092 2E-06 52.4 24.4 263 65-356 18-323 (342)
240 COG4814 Uncharacterized protei 97.4 0.0034 7.3E-08 58.9 12.8 212 405-634 45-285 (288)
241 KOG1446 Histone H3 (Lys4) meth 97.4 0.14 3.1E-06 49.5 28.0 243 82-359 16-268 (311)
242 KOG2055 WD40 repeat protein [G 97.4 0.017 3.6E-07 58.5 18.4 170 67-255 202-376 (514)
243 KOG1273 WD40 repeat protein [G 97.4 0.043 9.4E-07 52.9 20.3 161 64-239 45-217 (405)
244 KOG0296 Angio-associated migra 97.4 0.13 2.9E-06 50.7 23.8 113 82-210 108-223 (399)
245 KOG0275 Conserved WD40 repeat- 97.3 0.0074 1.6E-07 57.9 14.4 197 82-303 215-426 (508)
246 PRK02888 nitrous-oxide reducta 97.3 0.079 1.7E-06 57.2 23.5 148 86-254 198-352 (635)
247 TIGR02171 Fb_sc_TIGR02171 Fibr 97.3 0.028 6.1E-07 62.7 20.3 117 93-217 319-452 (912)
248 KOG0263 Transcription initiati 97.3 0.0097 2.1E-07 64.0 16.2 193 82-298 453-649 (707)
249 KOG2931 Differentiation-relate 97.3 0.031 6.7E-07 53.9 17.9 131 376-519 22-156 (326)
250 KOG0650 WD40 repeat nucleolar 97.3 0.012 2.6E-07 61.4 16.0 202 81-302 401-641 (733)
251 KOG0272 U4/U6 small nuclear ri 97.2 0.0062 1.3E-07 60.8 13.3 190 80-293 217-415 (459)
252 KOG2314 Translation initiation 97.2 0.016 3.5E-07 59.9 16.1 204 67-284 337-554 (698)
253 PTZ00472 serine carboxypeptida 97.2 0.0024 5.2E-08 68.2 11.0 131 386-523 60-219 (462)
254 KOG1407 WD40 repeat protein [F 97.2 0.06 1.3E-06 50.7 18.4 100 81-193 21-125 (313)
255 KOG4497 Uncharacterized conser 97.2 0.048 1E-06 52.9 18.2 90 224-332 324-415 (447)
256 KOG2315 Predicted translation 97.2 0.024 5.2E-07 58.8 17.0 144 84-239 221-375 (566)
257 PF00151 Lipase: Lipase; Inte 97.1 0.00059 1.3E-08 69.2 5.4 113 403-519 68-186 (331)
258 PF10230 DUF2305: Uncharacteri 97.1 0.0028 6.2E-08 62.5 9.9 111 406-520 2-122 (266)
259 KOG0643 Translation initiation 97.1 0.065 1.4E-06 50.6 17.8 187 82-285 54-251 (327)
260 KOG2048 WD40 repeat protein [G 97.1 0.033 7.1E-07 59.1 17.7 158 80-254 382-549 (691)
261 KOG0973 Histone transcription 97.1 0.014 3.1E-07 65.0 15.9 205 78-298 11-253 (942)
262 PF03096 Ndr: Ndr family; Int 97.1 0.0066 1.4E-07 59.0 11.7 236 381-639 4-281 (283)
263 KOG0772 Uncharacterized conser 97.1 0.015 3.3E-07 59.5 14.4 163 80-254 268-446 (641)
264 KOG1274 WD40 repeat protein [G 97.1 0.028 6E-07 61.7 17.2 166 64-254 87-263 (933)
265 KOG0639 Transducin-like enhanc 97.0 0.019 4E-07 58.7 14.6 175 82-281 467-649 (705)
266 PF07676 PD40: WD40-like Beta 97.0 0.0012 2.6E-08 43.6 4.3 28 84-111 12-39 (39)
267 KOG0275 Conserved WD40 repeat- 97.0 0.0035 7.7E-08 60.1 8.9 97 82-192 265-366 (508)
268 PF08450 SGL: SMP-30/Gluconola 97.0 0.39 8.4E-06 46.9 26.2 196 130-356 4-215 (246)
269 KOG2315 Predicted translation 97.0 0.098 2.1E-06 54.5 19.7 229 85-340 130-375 (566)
270 PF01674 Lipase_2: Lipase (cla 97.0 0.002 4.3E-08 60.9 7.2 89 409-505 4-95 (219)
271 PLN02733 phosphatidylcholine-s 97.0 0.0011 2.4E-08 69.6 5.9 89 422-519 108-200 (440)
272 KOG0296 Angio-associated migra 97.0 0.16 3.5E-06 50.1 19.7 155 80-255 64-222 (399)
273 COG1770 PtrB Protease II [Amin 97.0 0.8 1.7E-05 49.6 27.8 200 89-298 82-300 (682)
274 KOG0289 mRNA splicing factor [ 96.9 0.13 2.9E-06 51.8 19.3 151 83-253 306-462 (506)
275 PF00450 Peptidase_S10: Serine 96.9 0.0044 9.4E-08 66.0 10.0 140 380-523 17-184 (415)
276 PF05990 DUF900: Alpha/beta hy 96.9 0.0039 8.4E-08 60.2 8.6 113 404-522 16-139 (233)
277 COG4947 Uncharacterized protei 96.9 0.0013 2.8E-08 57.5 4.4 106 471-600 89-204 (227)
278 KOG1274 WD40 repeat protein [G 96.9 0.011 2.3E-07 64.8 12.3 116 80-209 138-264 (933)
279 KOG0279 G protein beta subunit 96.9 0.44 9.6E-06 45.5 25.9 198 81-299 16-223 (315)
280 COG3391 Uncharacterized conser 96.9 0.23 5.1E-06 51.9 22.1 198 83-298 76-283 (381)
281 PF07819 PGAP1: PGAP1-like pro 96.9 0.0057 1.2E-07 58.6 9.3 101 407-516 5-119 (225)
282 KOG0286 G-protein beta subunit 96.8 0.49 1.1E-05 45.5 22.4 197 81-299 56-260 (343)
283 KOG0305 Anaphase promoting com 96.8 0.31 6.7E-06 51.4 22.3 236 81-350 178-418 (484)
284 KOG0645 WD40 repeat protein [G 96.8 0.48 1E-05 45.1 21.7 157 80-253 61-229 (312)
285 TIGR02171 Fb_sc_TIGR02171 Fibr 96.8 0.024 5.2E-07 63.2 14.5 78 81-161 350-442 (912)
286 KOG2919 Guanine nucleotide-bin 96.8 0.066 1.4E-06 51.9 15.3 176 109-299 135-328 (406)
287 KOG0283 WD40 repeat-containing 96.8 0.11 2.4E-06 56.6 18.8 148 130-298 374-532 (712)
288 PLN00181 protein SPA1-RELATED; 96.7 1.5 3.2E-05 51.1 29.5 150 82-253 534-690 (793)
289 KOG0286 G-protein beta subunit 96.7 0.69 1.5E-05 44.6 21.5 195 128-356 58-262 (343)
290 KOG2183 Prolylcarboxypeptidase 96.6 0.0067 1.5E-07 60.9 8.0 130 387-520 63-203 (492)
291 PLN02919 haloacid dehalogenase 96.6 0.6 1.3E-05 55.5 25.4 196 83-299 626-889 (1057)
292 KOG0284 Polyadenylation factor 96.6 0.069 1.5E-06 53.3 14.5 107 179-293 227-334 (464)
293 KOG1445 Tumor-specific antigen 96.6 0.014 2.9E-07 61.3 10.1 152 82-252 679-843 (1012)
294 KOG3253 Predicted alpha/beta h 96.6 0.023 4.9E-07 59.8 11.6 164 406-615 176-346 (784)
295 KOG1445 Tumor-specific antigen 96.6 0.075 1.6E-06 56.0 15.2 199 81-298 628-844 (1012)
296 KOG4840 Predicted hydrolases o 96.6 0.0056 1.2E-07 56.0 6.3 105 408-523 38-147 (299)
297 KOG0315 G-protein beta subunit 96.5 0.71 1.5E-05 43.4 24.2 176 106-299 19-198 (311)
298 KOG4388 Hormone-sensitive lipa 96.5 0.011 2.4E-07 61.6 8.9 85 406-502 396-486 (880)
299 KOG0645 WD40 repeat protein [G 96.5 0.79 1.7E-05 43.7 20.6 153 82-251 16-180 (312)
300 PF07082 DUF1350: Protein of u 96.4 0.083 1.8E-06 50.2 13.5 179 408-614 18-204 (250)
301 KOG0273 Beta-transducin family 96.4 0.6 1.3E-05 47.8 20.1 151 80-250 235-388 (524)
302 KOG4389 Acetylcholinesterase/B 96.4 0.0046 9.9E-08 63.3 5.5 111 408-521 137-256 (601)
303 KOG2237 Predicted serine prote 96.4 0.07 1.5E-06 56.9 14.2 83 62-145 106-190 (712)
304 KOG0277 Peroxisomal targeting 96.4 0.2 4.4E-06 47.1 15.5 195 85-298 13-221 (311)
305 PLN02919 haloacid dehalogenase 96.4 2 4.2E-05 51.3 27.8 154 84-254 571-771 (1057)
306 COG5354 Uncharacterized protei 96.4 0.15 3.3E-06 52.5 15.9 143 85-238 227-379 (561)
307 KOG0282 mRNA splicing factor [ 96.4 0.031 6.8E-07 56.9 11.0 72 81-161 259-332 (503)
308 KOG0263 Transcription initiati 96.3 0.057 1.2E-06 58.3 13.2 112 82-209 537-651 (707)
309 PF00975 Thioesterase: Thioest 96.3 0.013 2.7E-07 56.7 7.6 97 407-517 1-101 (229)
310 KOG0771 Prolactin regulatory e 96.2 0.12 2.6E-06 51.9 14.0 159 80-252 186-355 (398)
311 KOG0647 mRNA export protein (c 96.2 0.86 1.9E-05 44.1 18.7 176 82-278 29-209 (347)
312 KOG0771 Prolactin regulatory e 96.2 0.12 2.6E-06 51.9 13.7 182 84-283 148-340 (398)
313 KOG3967 Uncharacterized conser 96.1 0.095 2.1E-06 47.8 11.6 101 403-509 98-214 (297)
314 PF06977 SdiA-regulated: SdiA- 96.1 1.4 3.1E-05 42.7 22.8 205 64-286 7-240 (248)
315 KOG0306 WD40-repeat-containing 96.0 0.61 1.3E-05 50.6 18.4 183 87-289 419-615 (888)
316 PF07433 DUF1513: Protein of u 96.0 1.9 4.2E-05 42.7 23.2 119 85-210 9-149 (305)
317 KOG0264 Nucleosome remodeling 96.0 0.61 1.3E-05 47.4 17.4 197 85-298 182-404 (422)
318 KOG2048 WD40 repeat protein [G 95.9 2.3 5.1E-05 45.7 22.3 153 82-255 27-186 (691)
319 COG4782 Uncharacterized protei 95.9 0.025 5.4E-07 56.3 7.5 110 406-522 116-236 (377)
320 KOG0640 mRNA cleavage stimulat 95.9 0.35 7.6E-06 46.8 14.7 193 84-299 116-336 (430)
321 KOG0273 Beta-transducin family 95.9 1.3 2.9E-05 45.4 19.4 196 81-298 277-482 (524)
322 KOG0282 mRNA splicing factor [ 95.9 0.2 4.3E-06 51.3 13.8 150 81-251 215-372 (503)
323 KOG0268 Sof1-like rRNA process 95.9 0.059 1.3E-06 53.0 9.7 170 67-253 170-347 (433)
324 PF12048 DUF3530: Protein of u 95.9 0.37 8E-06 48.7 15.9 135 377-519 63-228 (310)
325 KOG1063 RNA polymerase II elon 95.8 0.078 1.7E-06 56.5 10.7 116 80-203 525-646 (764)
326 KOG4378 Nuclear protein COP1 [ 95.7 0.25 5.5E-06 50.7 13.8 115 81-210 165-283 (673)
327 KOG2110 Uncharacterized conser 95.7 0.75 1.6E-05 45.7 16.5 134 108-252 107-249 (391)
328 COG3386 Gluconolactonase [Carb 95.7 0.87 1.9E-05 45.8 17.7 153 81-240 111-277 (307)
329 KOG2394 WD40 protein DMR-N9 [G 95.6 0.042 9.2E-07 56.7 8.0 56 81-141 291-349 (636)
330 PF07676 PD40: WD40-like Beta 95.6 0.033 7.1E-07 36.6 4.8 28 176-203 10-39 (39)
331 KOG0639 Transducin-like enhanc 95.5 0.18 3.9E-06 51.8 11.8 131 84-234 513-649 (705)
332 KOG0641 WD40 repeat protein [G 95.5 2.1 4.5E-05 39.6 21.7 68 179-254 236-304 (350)
333 PLN02209 serine carboxypeptida 95.5 0.073 1.6E-06 56.3 9.6 134 385-523 50-215 (437)
334 KOG0640 mRNA cleavage stimulat 95.5 0.64 1.4E-05 45.0 14.7 118 79-210 215-338 (430)
335 KOG1539 WD repeat protein [Gen 95.3 0.67 1.4E-05 50.9 16.0 58 178-238 580-637 (910)
336 PF07433 DUF1513: Protein of u 95.3 3.4 7.3E-05 41.0 26.0 191 78-279 48-269 (305)
337 KOG0265 U5 snRNP-specific prot 95.3 3 6.6E-05 40.5 20.4 116 81-210 48-166 (338)
338 PF04762 IKI3: IKI3 family; I 95.3 6.2 0.00013 46.3 25.1 99 177-279 212-316 (928)
339 PF10647 Gmad1: Lipoprotein Lp 95.3 0.75 1.6E-05 45.0 15.4 62 82-145 113-185 (253)
340 PF11187 DUF2974: Protein of u 95.2 0.044 9.5E-07 52.3 6.3 74 443-517 43-120 (224)
341 PF05705 DUF829: Eukaryotic pr 95.2 0.31 6.7E-06 47.4 12.5 46 566-615 178-223 (240)
342 KOG2182 Hydrolytic enzymes of 95.2 0.11 2.5E-06 53.9 9.4 112 405-520 85-207 (514)
343 COG3490 Uncharacterized protei 95.1 3.5 7.5E-05 39.9 19.3 131 86-236 41-179 (366)
344 KOG0307 Vesicle coat complex C 95.1 0.2 4.3E-06 56.7 11.7 178 62-254 88-285 (1049)
345 KOG2919 Guanine nucleotide-bin 95.0 2 4.3E-05 42.1 16.7 159 78-257 156-331 (406)
346 COG3319 Thioesterase domains o 94.9 0.036 7.7E-07 53.8 4.9 85 407-505 1-85 (257)
347 PLN03016 sinapoylglucose-malat 94.9 0.13 2.8E-06 54.4 9.3 132 386-523 49-213 (433)
348 KOG0278 Serine/threonine kinas 94.9 1.4 3E-05 41.5 14.5 189 82-297 102-298 (334)
349 COG1506 DAP2 Dipeptidyl aminop 94.8 0.99 2.2E-05 50.6 16.5 100 81-191 13-117 (620)
350 KOG0303 Actin-binding protein 94.7 2.7 5.9E-05 42.3 17.1 114 82-210 83-206 (472)
351 KOG0310 Conserved WD40 repeat- 94.7 5.4 0.00012 41.3 19.5 225 83-341 71-301 (487)
352 KOG2110 Uncharacterized conser 94.6 0.91 2E-05 45.1 13.4 112 83-205 132-248 (391)
353 KOG3975 Uncharacterized conser 94.5 0.79 1.7E-05 43.3 12.2 114 403-519 26-146 (301)
354 KOG0643 Translation initiation 94.4 1.4 3E-05 42.1 13.6 135 65-210 75-223 (327)
355 PF06433 Me-amine-dh_H: Methyl 94.3 0.53 1.2E-05 47.1 11.3 102 107-210 17-129 (342)
356 PF08386 Abhydrolase_4: TAP-li 94.3 0.12 2.6E-06 42.7 5.9 42 568-616 35-76 (103)
357 KOG0264 Nucleosome remodeling 94.1 5.1 0.00011 41.0 17.9 247 85-352 129-403 (422)
358 KOG0265 U5 snRNP-specific prot 94.1 4.4 9.5E-05 39.4 16.4 75 127-210 49-123 (338)
359 KOG0295 WD40 repeat-containing 94.0 1.8 3.9E-05 43.0 13.9 117 82-210 237-367 (406)
360 KOG0319 WD40-repeat-containing 93.9 3.4 7.4E-05 45.0 17.0 208 64-295 171-394 (775)
361 KOG0283 WD40 repeat-containing 93.8 3.5 7.7E-05 45.4 17.1 191 81-298 370-576 (712)
362 KOG1009 Chromatin assembly com 93.7 1.8 3.8E-05 43.7 13.5 106 83-193 126-249 (434)
363 KOG0303 Actin-binding protein 93.5 1.5 3.2E-05 44.1 12.7 144 81-238 132-283 (472)
364 PF05057 DUF676: Putative seri 93.5 0.074 1.6E-06 50.8 3.8 20 485-504 78-97 (217)
365 PRK10252 entF enterobactin syn 93.3 0.36 7.9E-06 59.6 10.3 99 406-518 1068-1169(1296)
366 KOG0288 WD40 repeat protein Ti 93.3 0.49 1.1E-05 47.6 8.9 98 82-191 343-448 (459)
367 PF02450 LCAT: Lecithin:choles 93.1 0.26 5.6E-06 51.7 7.4 88 423-519 66-159 (389)
368 KOG1007 WD repeat protein TSSC 93.1 1.6 3.4E-05 42.1 11.5 142 82-239 125-279 (370)
369 KOG2541 Palmitoyl protein thio 93.1 1.8 3.8E-05 41.6 11.9 90 406-507 24-114 (296)
370 KOG1282 Serine carboxypeptidas 93.0 0.73 1.6E-05 48.6 10.4 140 380-523 50-216 (454)
371 KOG1009 Chromatin assembly com 93.0 2.1 4.6E-05 43.2 12.9 103 79-195 64-186 (434)
372 PF13360 PQQ_2: PQQ-like domai 93.0 8.8 0.00019 36.8 19.8 186 88-299 32-231 (238)
373 KOG0290 Conserved WD40 repeat- 92.8 9.1 0.0002 37.2 16.2 137 107-254 173-319 (364)
374 COG1075 LipA Predicted acetylt 92.8 0.31 6.6E-06 50.0 7.3 97 408-518 61-162 (336)
375 PF04083 Abhydro_lipase: Parti 92.8 0.31 6.7E-06 35.9 5.3 50 372-421 8-58 (63)
376 KOG0278 Serine/threonine kinas 92.8 2.1 4.5E-05 40.4 11.7 111 82-206 186-298 (334)
377 PRK13613 lipoprotein LpqB; Pro 92.8 11 0.00024 41.8 19.5 165 81-255 363-541 (599)
378 KOG2106 Uncharacterized conser 92.8 1.7 3.6E-05 45.1 12.0 106 84-204 411-518 (626)
379 KOG0290 Conserved WD40 repeat- 92.7 10 0.00022 36.8 18.2 254 81-353 45-318 (364)
380 KOG0289 mRNA splicing factor [ 92.7 13 0.00029 38.1 22.1 198 64-283 241-450 (506)
381 KOG0306 WD40-repeat-containing 92.7 8 0.00017 42.4 17.3 192 81-297 455-663 (888)
382 KOG0646 WD40 repeat protein [G 92.6 12 0.00025 38.8 17.6 58 83-145 84-143 (476)
383 KOG0284 Polyadenylation factor 92.6 2.4 5.1E-05 42.9 12.5 215 63-297 159-381 (464)
384 KOG2096 WD40 repeat protein [G 92.6 4.7 0.0001 39.5 14.1 147 82-238 189-351 (420)
385 KOG1539 WD repeat protein [Gen 92.6 0.5 1.1E-05 51.8 8.5 74 65-144 557-637 (910)
386 KOG4328 WD40 protein [Function 92.4 14 0.00031 38.1 17.9 195 81-297 187-398 (498)
387 KOG1523 Actin-related protein 92.4 1.5 3.2E-05 42.9 10.6 132 65-210 93-239 (361)
388 TIGR03712 acc_sec_asp2 accesso 92.4 1.2 2.6E-05 46.6 10.6 118 385-525 274-395 (511)
389 PF01764 Lipase_3: Lipase (cla 92.3 0.34 7.4E-06 42.4 6.1 38 466-505 47-84 (140)
390 KOG0299 U3 snoRNP-associated p 92.3 15 0.00034 37.9 20.5 58 82-144 204-264 (479)
391 PF04762 IKI3: IKI3 family; I 91.8 12 0.00027 43.9 19.3 105 85-194 214-324 (928)
392 KOG1408 WD40 repeat protein [F 91.8 13 0.00027 40.8 17.3 106 179-298 601-713 (1080)
393 KOG0288 WD40 repeat protein Ti 91.7 3.6 7.8E-05 41.7 12.7 120 108-238 323-451 (459)
394 KOG2565 Predicted hydrolases o 91.4 0.76 1.6E-05 46.0 7.6 120 385-517 132-261 (469)
395 KOG4378 Nuclear protein COP1 [ 91.3 17 0.00037 38.0 17.1 157 81-255 122-282 (673)
396 KOG0316 Conserved WD40 repeat- 91.3 13 0.00029 35.0 16.1 56 83-143 62-119 (307)
397 KOG1920 IkappaB kinase complex 91.3 22 0.00047 41.6 19.5 115 179-297 200-321 (1265)
398 KOG4328 WD40 protein [Function 91.2 19 0.0004 37.3 17.2 140 81-233 235-384 (498)
399 KOG0313 Microtubule binding pr 91.1 6.4 0.00014 39.5 13.6 118 80-210 260-379 (423)
400 KOG0319 WD40-repeat-containing 91.0 9.8 0.00021 41.6 15.9 153 81-254 20-180 (775)
401 KOG2394 WD40 protein DMR-N9 [G 90.9 1.5 3.3E-05 45.8 9.4 124 81-234 220-348 (636)
402 PF04053 Coatomer_WDAD: Coatom 90.8 3.7 8E-05 43.6 12.8 171 83-287 35-215 (443)
403 KOG0269 WD40 repeat-containing 90.8 12 0.00026 41.3 16.2 198 64-277 110-319 (839)
404 PF11288 DUF3089: Protein of u 90.6 0.63 1.4E-05 43.4 6.0 86 435-521 45-138 (207)
405 PF07995 GSDH: Glucose / Sorbo 90.4 23 0.0005 36.2 18.9 118 84-209 5-158 (331)
406 KOG1920 IkappaB kinase complex 90.3 21 0.00046 41.6 18.4 121 85-209 200-324 (1265)
407 KOG0302 Ribosome Assembly prot 90.1 23 0.0005 35.8 17.8 153 85-253 216-378 (440)
408 KOG0269 WD40 repeat-containing 90.0 4.3 9.3E-05 44.5 12.3 117 82-209 178-298 (839)
409 PRK13614 lipoprotein LpqB; Pro 89.9 14 0.0003 40.6 16.4 162 81-254 343-519 (573)
410 PF03088 Str_synth: Strictosid 89.7 5.9 0.00013 31.5 10.0 72 131-208 3-88 (89)
411 KOG1538 Uncharacterized conser 89.7 17 0.00037 39.4 16.0 53 82-140 14-69 (1081)
412 cd00741 Lipase Lipase. Lipase 89.6 0.5 1.1E-05 42.2 4.5 39 467-507 12-50 (153)
413 KOG4283 Transcription-coupled 89.4 4.6 0.0001 39.1 10.7 138 62-210 122-279 (397)
414 PF05694 SBP56: 56kDa selenium 89.3 7.2 0.00016 40.5 12.8 128 107-239 222-394 (461)
415 PRK02888 nitrous-oxide reducta 89.3 19 0.00041 39.6 16.5 109 179-299 239-352 (635)
416 KOG1524 WD40 repeat-containing 89.0 8.2 0.00018 40.6 12.9 86 84-194 190-276 (737)
417 PF03088 Str_synth: Strictosid 89.0 6.3 0.00014 31.3 9.7 53 197-254 35-88 (89)
418 KOG4499 Ca2+-binding protein R 88.7 11 0.00024 35.6 12.3 121 82-210 110-244 (310)
419 KOG1408 WD40 repeat protein [F 88.7 3.4 7.3E-05 44.9 10.2 134 63-208 57-197 (1080)
420 KOG0650 WD40 repeat nucleolar 88.5 6.8 0.00015 41.8 12.1 114 82-209 523-639 (733)
421 COG2939 Carboxypeptidase C (ca 88.5 1.4 3.1E-05 46.3 7.3 119 403-523 98-246 (498)
422 TIGR02604 Piru_Ver_Nterm putat 88.3 26 0.00056 36.4 16.9 100 129-238 75-202 (367)
423 KOG0310 Conserved WD40 repeat- 88.2 36 0.00078 35.6 20.6 131 64-210 90-228 (487)
424 COG3391 Uncharacterized conser 88.0 37 0.0008 35.5 27.0 245 84-356 34-286 (381)
425 PF02089 Palm_thioest: Palmito 87.9 2.5 5.4E-05 41.4 8.2 47 470-517 66-113 (279)
426 KOG0313 Microtubule binding pr 87.9 33 0.00071 34.7 17.6 190 81-295 194-415 (423)
427 KOG0307 Vesicle coat complex C 87.8 1.8 3.9E-05 49.4 8.0 138 63-210 138-287 (1049)
428 KOG0268 Sof1-like rRNA process 87.7 1.2 2.7E-05 44.2 5.9 131 63-206 209-346 (433)
429 KOG2041 WD40 repeat protein [G 87.6 27 0.00059 38.3 16.0 239 80-360 115-376 (1189)
430 COG3490 Uncharacterized protei 87.5 23 0.00049 34.6 13.9 75 179-254 72-149 (366)
431 PF03283 PAE: Pectinacetyleste 87.4 0.46 1E-05 48.9 3.1 37 467-503 138-174 (361)
432 KOG0294 WD40 repeat-containing 87.2 30 0.00066 34.1 14.7 68 82-160 129-198 (362)
433 PLN02454 triacylglycerol lipas 87.0 1 2.2E-05 46.6 5.3 40 465-504 208-247 (414)
434 KOG0270 WD40 repeat-containing 86.7 42 0.00091 34.7 17.1 150 130-298 248-404 (463)
435 KOG3724 Negative regulator of 86.6 0.71 1.5E-05 50.7 3.9 46 467-513 157-209 (973)
436 KOG4283 Transcription-coupled 86.4 34 0.00074 33.4 18.0 94 103-203 120-217 (397)
437 PRK13615 lipoprotein LpqB; Pro 86.4 44 0.00095 36.7 17.4 158 83-255 336-504 (557)
438 PLN02408 phospholipase A1 85.8 1.2 2.7E-05 45.4 5.1 39 467-505 182-220 (365)
439 cd00519 Lipase_3 Lipase (class 85.7 1.5 3.4E-05 42.1 5.6 37 467-505 112-148 (229)
440 PF05096 Glu_cyclase_2: Glutam 85.7 37 0.0008 33.1 19.5 161 174-357 44-207 (264)
441 KOG1007 WD repeat protein TSSC 85.6 13 0.00028 36.1 11.2 142 179-341 128-280 (370)
442 KOG0277 Peroxisomal targeting 85.4 35 0.00077 32.7 19.0 153 83-254 63-222 (311)
443 KOG1036 Mitotic spindle checkp 85.4 40 0.00086 33.2 19.2 148 82-254 15-164 (323)
444 smart00824 PKS_TE Thioesterase 84.7 4.2 9E-05 37.9 8.1 71 434-516 24-98 (212)
445 PF06259 Abhydrolase_8: Alpha/ 84.6 2.3 4.9E-05 38.9 5.7 39 468-507 93-131 (177)
446 PLN02571 triacylglycerol lipas 84.6 1.4 3E-05 45.7 4.8 41 465-505 206-246 (413)
447 KOG2100 Dipeptidyl aminopeptid 84.4 85 0.0018 36.2 20.6 75 181-255 346-424 (755)
448 KOG0308 Conserved WD40 repeat- 84.2 35 0.00076 37.1 14.7 144 106-265 139-297 (735)
449 KOG4227 WD40 repeat protein [G 83.8 34 0.00073 34.7 13.6 148 80-241 56-217 (609)
450 KOG0302 Ribosome Assembly prot 83.6 7.3 0.00016 39.1 9.0 126 70-208 249-379 (440)
451 PF11768 DUF3312: Protein of u 83.5 19 0.0004 38.7 12.5 85 82-175 261-345 (545)
452 PLN02324 triacylglycerol lipas 83.4 1.8 3.9E-05 44.8 5.0 40 465-504 195-234 (415)
453 KOG0294 WD40 repeat-containing 83.2 50 0.0011 32.7 18.0 139 82-239 45-189 (362)
454 KOG1963 WD40 repeat protein [G 83.0 17 0.00037 40.6 12.4 111 83-209 208-324 (792)
455 KOG0641 WD40 repeat protein [G 82.7 42 0.0009 31.3 22.8 132 80-218 32-182 (350)
456 PF15492 Nbas_N: Neuroblastoma 82.4 23 0.00049 34.5 11.5 36 80-120 43-78 (282)
457 PLN02517 phosphatidylcholine-s 82.1 2 4.3E-05 46.4 4.9 75 424-505 158-233 (642)
458 PLN02802 triacylglycerol lipas 81.7 2.2 4.8E-05 45.2 5.0 38 467-504 312-349 (509)
459 COG4287 PqaA PhoPQ-activated p 81.5 6.3 0.00014 39.6 7.7 124 482-615 231-371 (507)
460 KOG2321 WD40 repeat protein [G 81.3 84 0.0018 33.9 17.3 31 84-118 55-85 (703)
461 PLN02606 palmitoyl-protein thi 81.2 13 0.00028 36.9 9.8 100 405-516 26-128 (306)
462 COG4257 Vgb Streptogramin lyas 81.0 58 0.0012 31.8 20.6 149 85-254 66-219 (353)
463 KOG0316 Conserved WD40 repeat- 80.8 52 0.0011 31.2 17.3 189 82-299 19-214 (307)
464 KOG0295 WD40 repeat-containing 80.7 68 0.0015 32.4 16.4 194 82-299 152-365 (406)
465 KOG1524 WD40 repeat-containing 80.7 29 0.00063 36.8 12.3 93 82-189 106-201 (737)
466 PLN00413 triacylglycerol lipas 79.3 3.2 6.9E-05 43.7 5.2 38 465-504 266-303 (479)
467 PLN02753 triacylglycerol lipas 79.1 2.9 6.4E-05 44.5 4.9 41 464-504 288-331 (531)
468 PF06977 SdiA-regulated: SdiA- 77.8 71 0.0015 31.0 18.5 112 128-252 24-148 (248)
469 PLN02633 palmitoyl protein thi 77.7 21 0.00045 35.6 10.0 101 405-517 25-128 (314)
470 COG3204 Uncharacterized protei 77.6 77 0.0017 31.3 19.8 133 64-207 71-212 (316)
471 PLN02761 lipase class 3 family 77.6 3.7 8E-05 43.7 5.1 40 465-504 270-313 (527)
472 KOG0321 WD40 repeat-containing 77.2 74 0.0016 34.7 14.2 60 80-144 100-164 (720)
473 PLN02310 triacylglycerol lipas 76.7 4.1 8.8E-05 42.3 5.0 40 465-504 187-228 (405)
474 KOG2369 Lecithin:cholesterol a 76.4 4.2 9E-05 42.5 5.0 77 424-508 126-205 (473)
475 PLN02162 triacylglycerol lipas 76.1 4 8.7E-05 42.9 4.8 38 465-504 260-297 (475)
476 TIGR03032 conserved hypothetic 75.9 51 0.0011 32.9 12.0 73 110-194 188-260 (335)
477 PLN02934 triacylglycerol lipas 75.2 4.4 9.5E-05 43.1 4.9 38 465-504 303-340 (515)
478 KOG1523 Actin-related protein 74.3 33 0.00072 33.9 10.1 103 82-194 12-120 (361)
479 PF13360 PQQ_2: PQQ-like domai 74.2 81 0.0018 29.9 25.5 136 108-262 4-148 (238)
480 PLN02719 triacylglycerol lipas 74.1 5.1 0.00011 42.6 5.1 41 464-504 274-317 (518)
481 PRK13613 lipoprotein LpqB; Pro 73.6 1.1E+02 0.0024 34.0 15.5 124 82-210 410-542 (599)
482 KOG2111 Uncharacterized conser 73.5 13 0.00028 36.6 7.1 59 82-144 183-246 (346)
483 PRK13615 lipoprotein LpqB; Pro 72.4 36 0.00078 37.3 11.1 80 81-161 417-504 (557)
484 TIGR03300 assembly_YfgL outer 72.2 1.3E+02 0.0028 31.3 23.7 156 108-285 201-369 (377)
485 COG5276 Uncharacterized conser 72.1 1.1E+02 0.0023 30.3 17.4 176 162-354 74-256 (370)
486 KOG4547 WD40 repeat-containing 71.9 46 0.00099 35.6 11.2 102 79-187 143-250 (541)
487 PF08553 VID27: VID27 cytoplas 71.8 73 0.0016 36.5 13.6 129 106-252 503-646 (794)
488 TIGR02604 Piru_Ver_Nterm putat 71.6 1.3E+02 0.0029 31.2 17.1 139 130-279 18-195 (367)
489 KOG2321 WD40 repeat protein [G 71.5 81 0.0018 34.0 12.7 160 82-260 177-351 (703)
490 PF07995 GSDH: Glucose / Sorbo 71.4 80 0.0017 32.3 13.1 117 130-254 6-157 (331)
491 PLN02213 sinapoylglucose-malat 71.4 9.7 0.00021 38.7 6.4 85 437-523 3-99 (319)
492 PF10313 DUF2415: Uncharacteri 71.0 10 0.00022 25.4 4.1 31 82-117 2-35 (43)
493 PLN03037 lipase class 3 family 70.9 6.4 0.00014 42.0 4.9 38 467-504 298-337 (525)
494 COG4257 Vgb Streptogramin lyas 70.8 1.1E+02 0.0024 30.0 19.1 170 85-278 108-286 (353)
495 TIGR03300 assembly_YfgL outer 70.2 1.4E+02 0.003 31.0 28.0 239 108-387 116-372 (377)
496 KOG0281 Beta-TrCP (transducin 70.2 40 0.00087 33.7 9.7 172 103-299 253-429 (499)
497 PRK13614 lipoprotein LpqB; Pro 69.7 1.1E+02 0.0024 33.8 14.2 123 82-210 384-521 (573)
498 PF13449 Phytase-like: Esteras 69.7 1.3E+02 0.0029 30.5 19.0 184 112-298 6-251 (326)
499 PF05576 Peptidase_S37: PS-10 68.9 8.4 0.00018 39.7 5.1 107 405-522 62-171 (448)
500 TIGR03606 non_repeat_PQQ dehyd 68.6 1.3E+02 0.0028 32.2 14.0 105 85-195 34-165 (454)
No 1
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-110 Score=850.95 Aligned_cols=612 Identities=50% Similarity=0.888 Sum_probs=581.4
Q ss_pred CHHHHhhccCCCCCCCCeEeCCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEEecccccCCCCc
Q 006375 1 MFAELKGRIKQEDVSAPFRQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGF 80 (648)
Q Consensus 1 ~~~~~~~r~~~~~~s~p~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~ 80 (648)
||+||++|+++++.|+|.++|.|+||+|...|++|+++||....++ .++|+|||+|++++++++
T Consensus 65 if~Ei~~Rik~dd~Svp~~~~~~~Yy~r~~~g~~y~~~~R~~~~g~----------------~~eevlLD~n~~A~g~~f 128 (682)
T COG1770 65 IFEEIKGRIKEDDLSVPYRKGPYEYYSRTEEGKEYPIYCRQPDEGG----------------EGEEVLLDVNKEAEGHDF 128 (682)
T ss_pred HHHHHhhhccCcCCCCccccCCeeEEEEecCCCcceeEEeccCCCC----------------CceeEeecchhccCcccc
Confidence 6899999999999999999999999999999999999999765431 258999999999999999
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECC
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
++++.+++|||+++|||+.|..|+|+++|+++|+++|+..++.+.++..+++|.+|+ ++||++.++..++.+||+|.++
T Consensus 129 ~~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~g 208 (682)
T COG1770 129 FSLGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEITNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLG 208 (682)
T ss_pred eeeeeeeeCCCCceEEEEEecccccEEEEEEEecccccccchhhcccccceEEecCCCeEEEEEEcCCCCcceEEEEecC
Confidence 999999999999999999999999999999999999999998888888889999999 9999999998999999999999
Q ss_pred CCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeEeeecccceeeeEeecCCEEEEEec
Q 006375 160 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFITRR 238 (648)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~~~~~s~dg~~l~~~~~ 238 (648)
++.+.+++||++.++.|++++..|.+.++|++..++..++++++++.+.++ .++.+.++..+++|.+.+.|+.+|+.+|
T Consensus 209 t~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY~~eh~~d~f~i~sN 288 (682)
T COG1770 209 TPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVRLLDADDPEAEPKVVLPRENGVEYSVEHGGDRFYILSN 288 (682)
T ss_pred CCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCcceeEEEEecCCCCCceEEEEEcCCCcEEeeeecCcEEEEEec
Confidence 988899999999999999999999999999999999999999999999887 6788999999999999999999999999
Q ss_pred cCCCCCcEEEEEeCCCCCccee--EecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecC
Q 006375 239 SDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFI 316 (648)
Q Consensus 239 ~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~ 316 (648)
.++ .|++|++.++ .+....| ++++.++..+.++..+.+++++.+++++.+++++.+... ++ ...|.|+
T Consensus 289 ~~g-knf~l~~ap~-~~~~~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~-~~-------~~~i~f~ 358 (682)
T COG1770 289 ADG-KNFKLVRAPV-SADKSNWRELIPHREDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKT-GE-------ERGIAFD 358 (682)
T ss_pred CCC-cceEEEEccC-CCChhcCeeeeccCCCceeeeeeeeccEEEEEecccCCceEEEEecCC-Cc-------eeeEEec
Confidence 854 8999999998 5566677 899999999999999999999999999999999998864 22 2568899
Q ss_pred CCeeeee-CCCCcccccEEEEEEeeCCCCCEEEEEECCCCcEEEEEEeeecCCCCCCCcceEEEEEeCCCCeEEeEEEEE
Q 006375 317 DPVYSID-PSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVY 395 (648)
Q Consensus 317 ~~~~~v~-~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~i~~~l~~ 395 (648)
++.++.. +.+.+++++.++|.++|+++|.++|.||+.++++++++.++++++|+++.|.+++++++..||++||+.|++
T Consensus 359 ~~ay~~~l~~~~e~~s~~lR~~ysS~ttP~~~~~~dm~t~er~~LkqqeV~~g~dp~~Y~s~riwa~a~dgv~VPVSLvy 438 (682)
T COG1770 359 DEAYSAGLSGNPEFDSDRLRYSYSSMTTPATLFDYDMATGERTLLKQQEVPGGFDPEDYVSRRIWATADDGVQVPVSLVY 438 (682)
T ss_pred chhhhccccCCCCCCCccEEEEeecccccceeEEeeccCCcEEEEEeccCCCCCChhHeEEEEEEEEcCCCcEeeEEEEE
Confidence 9888765 577889999999999999999999999999999999999888888999999999999999999999999999
Q ss_pred eeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHH
Q 006375 396 RKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEY 475 (648)
Q Consensus 396 ~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~ 475 (648)
+++. +.+++.|++|++||+||.++.+.|+..++.|++||++.+++|+||||+.|+.|+++|+..+|+|+|+||++|+++
T Consensus 439 rkd~-~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~ 517 (682)
T COG1770 439 RKDT-KLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARH 517 (682)
T ss_pred eccc-CCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHH
Confidence 9997 788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHHHHHHHHc
Q 006375 476 LIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKS 555 (648)
Q Consensus 476 l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 555 (648)
|++++++++++|+++|+|+||+||+++++++|++|+++|+.+||+|++++|+++++|++..+|.|||+|.+++.+++|++
T Consensus 518 Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~d~e~y~yikS 597 (682)
T COG1770 518 LVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEYYDYIKS 597 (682)
T ss_pred HHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCcCCHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHH
Q 006375 556 YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 635 (648)
Q Consensus 556 ~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 635 (648)
||||+|++...||++|+++|.+|++|.+|++.|++++|+..+.+..+++++++|++||++.+++.+.+++.|++++|+.+
T Consensus 598 YSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~~lee~A~eYaF~l~ 677 (682)
T COG1770 598 YSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQRLEEIAFEYAFLLK 677 (682)
T ss_pred cCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCchHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCC
Q 006375 636 ALSM 639 (648)
Q Consensus 636 ~l~~ 639 (648)
.++.
T Consensus 678 ~~~~ 681 (682)
T COG1770 678 LAGT 681 (682)
T ss_pred hccC
Confidence 8874
No 2
>PRK10115 protease 2; Provisional
Probab=100.00 E-value=4.3e-93 Score=783.73 Aligned_cols=615 Identities=40% Similarity=0.673 Sum_probs=538.3
Q ss_pred CHHHHhhccCCCCCCCCeEeCCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEEecccccCCCCc
Q 006375 1 MFAELKGRIKQEDVSAPFRQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGF 80 (648)
Q Consensus 1 ~~~~~~~r~~~~~~s~p~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~ 80 (648)
|+++|++|+..+++++|.+.|+|+||.+...|++++++||+...+. +.+.+|+|||+|++++++++
T Consensus 61 l~~~~~~~~~~~~~~~p~~~g~~~y~~~~~~g~~~~~~~r~~~~~~--------------~~~~~~~llD~n~~a~~~~~ 126 (686)
T PRK10115 61 ILKEIIDRIPQREVSAPYIKNGYRYRHIYEPGCEYAIYQRQSAFSE--------------EWDEWETLLDANKRAAHSEF 126 (686)
T ss_pred HHHHHHhhcccccCCCCEEECCEEEEEEEcCCCccEEEEEecCCCC--------------CCCCCEEEEcchhhccCCCc
Confidence 5789999999999999999999999999999999999999875321 01357999999999888899
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEecCC-eEEEEEeCCC-CCCceEEEEEC
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEI-LRPDKAWLHKL 158 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg-~l~y~~~~~~-~~~~~l~~~~l 158 (648)
+.+..+.|||||++|||+.+.+|+|+++|+++|+++|+.+.+.+.++...++|++|+ +|+|++.++. .++.+||+|++
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~l 206 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTI 206 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcceEEEEeeCCCEEEEEEecCCCCCCCEEEEEEC
Confidence 999999999999999999999999999999999999987776777765669999999 9999998653 57899999999
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeEeeecccceeeeEeecCCEEEEEe
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFITR 237 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~~~~~s~dg~~l~~~~ 237 (648)
+++++++.+++++.+..+.+....+.|++++++.+.+..++++++++++... +++.+.++..+..+.+.+.++.||+.+
T Consensus 207 gt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~t 286 (686)
T PRK10115 207 GTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDHYQHRFYLRS 286 (686)
T ss_pred CCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEEeCCCEEEEEE
Confidence 9998889999998877676667778899999988888888899999854322 256677777777777778889999999
Q ss_pred ccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecCC
Q 006375 238 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFID 317 (648)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~ 317 (648)
|. ++++++|+.+++.+++..+.++++.++..+.++.++++++++..++++..++++++++ ++.+ ..+.+++
T Consensus 287 n~-~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~--~~~~------~~l~~~~ 357 (686)
T PRK10115 287 NR-HGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRK--TREV------IGIAFDD 357 (686)
T ss_pred cC-CCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcCC--CCce------EEecCCC
Confidence 97 5789999999987533334488886677799999999999999999999999999875 3322 2333333
Q ss_pred Cee-eeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCcEEEEEEeeecCCCCCCCcceEEEEEeCCCCeEEeEEEEEe
Q 006375 318 PVY-SIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYR 396 (648)
Q Consensus 318 ~~~-~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~i~~~l~~~ 396 (648)
+.+ +..+.+.+++++.+++.++|+++|+++|.+|+.+++.++++... .+.+++..+.++++++++.||.+||++++++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~~~~l~~~~-~~~~~~~~~~~e~v~~~s~DG~~Ip~~l~~~ 436 (686)
T PRK10115 358 PAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRVLKQTE-VPGFDAANYRSEHLWITARDGVEVPVSLVYH 436 (686)
T ss_pred CceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCcEEEEEecC-CCCcCccccEEEEEEEECCCCCEEEEEEEEE
Confidence 322 22234555778889999999999999999999998855544322 2357888889999999999999999999998
Q ss_pred eCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHH
Q 006375 397 KNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYL 476 (648)
Q Consensus 397 ~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l 476 (648)
++. ..+++.|+||++||||+.+..+.|+..++.|+++||+|+++|+|||||||++|+++|...+|.++++|+++|++||
T Consensus 437 ~~~-~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~L 515 (686)
T PRK10115 437 RKH-FRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDAL 515 (686)
T ss_pred CCC-CCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHH
Confidence 875 4567789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHHHHHHHHcC
Q 006375 477 IKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSY 556 (648)
Q Consensus 477 ~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 556 (648)
++++++|++||+|+|+|+||+|++++++++|++|+|+|+.+|++|++++++++++|++..++.+||+|++++.+++|+++
T Consensus 516 v~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~ 595 (686)
T PRK10115 516 LKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSY 595 (686)
T ss_pred HHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999888888888888999999999999999999
Q ss_pred CccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHh
Q 006375 557 SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 636 (648)
Q Consensus 557 sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 636 (648)
||++|++++++|++||+||.+|+|||++|++||+++|++++++.+++++++++++||+...++.+.+++.|++++||.++
T Consensus 596 SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~ 675 (686)
T PRK10115 596 SPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIAL 675 (686)
T ss_pred CchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999989999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred cCCC
Q 006375 637 LSML 640 (648)
Q Consensus 637 l~~~ 640 (648)
++..
T Consensus 676 ~~~~ 679 (686)
T PRK10115 676 AQGT 679 (686)
T ss_pred hCCc
Confidence 9874
No 3
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.4e-91 Score=701.44 Aligned_cols=623 Identities=43% Similarity=0.696 Sum_probs=532.2
Q ss_pred CHHHHhhccCCCCCCCCeEeCCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEEecccccCCCCc
Q 006375 1 MFAELKGRIKQEDVSAPFRQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGF 80 (648)
Q Consensus 1 ~~~~~~~r~~~~~~s~p~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~ 80 (648)
|+.||+.|+..+..++|.|+|.|+||.++.++++++++|||....+ +...-+.. ...+..+|+||.|+.++.+++
T Consensus 63 l~~em~~~i~ye~~~~p~r~G~~yyY~~n~~lkq~vl~~rr~~~~e--~~~~ld~~---~~~dd~tV~Ld~~~~aed~~Y 137 (712)
T KOG2237|consen 63 LFSEMTKRIDYEIITPPLRWGPWYYYFYNTGLKQYVLYCRRLLEKE--EEVFLDPN---ALGDDGTVLLDTNQIAEDFKY 137 (712)
T ss_pred HHHHhhhccCccccCCccccCCEEEEEEcCCceehhHHHHhhhhcc--cceecCCc---cCCCCceEEechhhhhhcCCc
Confidence 5789999999999999999999999999999999999999987321 11111211 112345799999999998888
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc-ccCccceeEEec-CC-eEEEEEeCCCCCCceEEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAG-NE-ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~Wsp-Dg-~l~y~~~~~~~~~~~l~~~~ 157 (648)
+..+-...|||.++|||+.+..|+|.+++ |.+++..++.... .+++. ..+|.. || .|+|.+.++.+++++||+|.
T Consensus 138 ~~~gls~~spD~~~ia~~~~~~~~e~~~~-v~~~~~~~~~~~~~~~g~~-y~~w~~~dg~~l~~~t~~~~~r~hkvy~h~ 215 (712)
T KOG2237|consen 138 FAYGLSESSPDHKYIAYTKDTEGKELFTV-VIDVKFSGPVWTHDGKGVS-YLAWAKQDGEDLLYGTEDENNRPHKVYYHT 215 (712)
T ss_pred eEEeecccCCCceEEEEEEcCCCCcccee-eeeeccCCceeeccCCceE-eeeecccCCceeeeeeeccccCcceEEEEe
Confidence 88888889999999999999999999999 9999998877543 44444 499987 88 89999999999999999999
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccc---cEEEEEECCCCC-ceeE-eeecccceeee------E
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKIT---RFVFYLDVSKPE-ELRV-LTPRVVGVDTA------A 226 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~---~~l~~~dl~~~~-~~~~-l~~~~~~~~~~------~ 226 (648)
+|+.+++|.+++++.++..++...-..|+++..+.+.+.+. +.+|.+|+.... .++. +.++..+++++ +
T Consensus 216 ~Gtdq~~Dvl~~~e~d~~~~vf~~~~kD~~~~~i~si~~t~s~~~~vf~~d~~~~~~gl~~~~~~~v~~v~~f~eh~~fi 295 (712)
T KOG2237|consen 216 LGTDQSEDVLLYEEKDEPKHVFISETKDSGFYTINSISETCSPVNKVFLCDLSSPSDGLELLILPRVKGVDCFVEHYDFI 295 (712)
T ss_pred cccCCCcceEEEecCCCCeEEEEEEEecCceEEEEEeeccCCccceEEEEecccccCCcchheeeccchhhhhhhhhhhe
Confidence 99999999999999998777666777777777777765544 599999998765 3443 66676665543 4
Q ss_pred eecCCEEEEEeccCCCCCcEEEEEeCCCCCccee--EecCCCCcccceEEEeCCEEEEEEecCCeeEEE-EEEcCCCCCc
Q 006375 227 SHRGNHFFITRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKIT-TYRLPAVGEP 303 (648)
Q Consensus 227 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~-v~~~~~~g~~ 303 (648)
...+..++|.+|. +++++.+.++++..+.+..| ++.+.+...+..+...++.+++.........+. +...- .|.
T Consensus 296 ~~~~t~~~~~tn~-~~p~y~l~r~~~~~~~~~~W~~v~~e~~~~vl~~~~~~~~~~ll~~~~~~l~~i~q~~~~l-~g~- 372 (712)
T KOG2237|consen 296 TNEGTEFYFLTNK-DAPNYYLLRIDVKEPEESKWETVFAEHEKDVLEDVDMVNDNLLLVCYMSDLKHILQVRDLL-DGS- 372 (712)
T ss_pred eccCcceeeeccC-CCCceeEEeeeccCccccccceeecccchhhhhhhhhhcCceEEEEEecCchhhccccccc-cCc-
Confidence 4556889999997 68999999999988766677 777777777888888887666555544443332 22221 122
Q ss_pred ccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCcE---EEEEEeeecCCCCCCCcceEEEE
Q 006375 304 LKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS---VLKKIETVLGGFDTNNYFTERKW 380 (648)
Q Consensus 304 ~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 380 (648)
....||.+.+++.+...+++...++|.++|+.+|+.+|.||+..++. .+..+....++++.+.|.+++++
T Consensus 373 -------~~~~fpLpv~sv~~~~g~~~~~~~~f~~sS~l~P~~iy~yDl~~~~~e~~vf~e~~~~lpg~~~s~y~~~r~~ 445 (712)
T KOG2237|consen 373 -------LLRSFPLPVGSVSGTSGDFKSSTIRFQFSSFLTPGSIYDYDLANGKPEPSVFREITVVLPGFDASDYVVERIE 445 (712)
T ss_pred -------eeeeecCCCCcccccccCCCCceEEEEEeccCCCCeEEEeeccCCCCCCcceeeeccccCcccccceEEEEEE
Confidence 34556777777777777899999999999999999999999998842 22233334578999999999999
Q ss_pred EeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhccccc
Q 006375 381 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 460 (648)
Q Consensus 381 ~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~ 460 (648)
++|+||++||+++++.++. +.+++.|++||+||||+.+..+.|......|+++|++.+.+|+|||||+|.+||+.|+..
T Consensus 446 ~~SkDGt~VPM~Iv~kk~~-k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~la 524 (712)
T KOG2237|consen 446 VSSKDGTKVPMFIVYKKDI-KLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLA 524 (712)
T ss_pred EecCCCCccceEEEEechh-hhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchh
Confidence 9999999999999998887 788899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccc
Q 006375 461 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEE 540 (648)
Q Consensus 461 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~ 540 (648)
+|+|.++|+++|++||++++++.|+++++.|+|+||+|++++++++|++|+|+|+.+||+||++++.++.+|++..+|++
T Consensus 525 kKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee 604 (712)
T KOG2237|consen 525 KKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEE 604 (712)
T ss_pred hhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHcCCccccCCCCC-CCeEEEeecCCCCccCCchHHHHHHHHHhcCCC----CCeEEEEecCCCCccC
Q 006375 541 WGDPWKEEFYFYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD----DNILLFKCELGAGHFS 615 (648)
Q Consensus 541 ~g~~~~~~~~~~~~~~sp~~~~~~~~-~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~gH~~ 615 (648)
||+|.+.+.+-++++|+|++|+++.. ||.|||+++.+|+||+++++.|+.++||.+-.. .+++++++++++||+.
T Consensus 605 ~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~ 684 (712)
T KOG2237|consen 605 WGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGA 684 (712)
T ss_pred cCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCcccc
Confidence 99999888888888999999999886 999999999999999999999999999987433 3679999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHhcCCCC
Q 006375 616 KSGRFERLREAAFTYTFLMRALSMLP 641 (648)
Q Consensus 616 ~~~~~~~~~~~~~~~~fl~~~l~~~~ 641 (648)
..++..++++.++.++||.+.++..+
T Consensus 685 ~~~~~k~~~E~a~~yaFl~K~~~~~~ 710 (712)
T KOG2237|consen 685 EKPRFKQIEEAAFRYAFLAKMLNSDW 710 (712)
T ss_pred CCchHHHHHHHHHHHHHHHHHhcCcc
Confidence 99999999999999999999988654
No 4
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=100.00 E-value=9.8e-73 Score=568.55 Aligned_cols=580 Identities=29% Similarity=0.402 Sum_probs=445.8
Q ss_pred CCCCCCCeEeCCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEEecccccCCC-CcEEEeeEEeC
Q 006375 11 QEDVSAPFRQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGR-GFYSVGCFQVS 89 (648)
Q Consensus 11 ~~~~s~p~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~-~~~~~~~~~~S 89 (648)
.++.++|...++++|...++......++-|....+ + ....+..+||+|++++++.. ..+.+.+.+.+
T Consensus 51 ~~~~~~~~~~~~~~ynFw~D~~~p~Glwr~ttl~s---------y---rs~~p~WevLiD~d~Ls~~~g~~v~~~Gas~~ 118 (648)
T COG1505 51 YEDIPIPFERGGRYYNFWQDALYPRGLYRRTTLET---------Y---RSAKPEWEVLIDVDALSADLGDKVALGGASVL 118 (648)
T ss_pred ccccCcceeccceeEEeeccccCcceeEEeeccee---------e---cccCCCceeecCHHHHhhhcCCcEEEccceeC
Confidence 36688999999998887777655554444333221 0 11235679999999997643 37888899999
Q ss_pred CCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEecCCeEEEEEeCCC------CCC---ceEEEEECCC
Q 006375 90 PDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEI------LRP---DKAWLHKLEA 160 (648)
Q Consensus 90 PDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg~l~y~~~~~~------~~~---~~l~~~~l~~ 160 (648)
||+++++|+.+.+|++...++++|++||..+... .-....+.|.++++++|.+.... +.+ ..+++..+..
T Consensus 119 ~~~~R~l~s~S~gG~D~~~~re~Dlet~~fv~~~-~f~~~~~~wld~d~~~~~~~~~~~e~T~sGy~~~~~~~krg~~f~ 197 (648)
T COG1505 119 PDGTRLLYSLSIGGSDAGITREFDLETGEFVEEE-GFKFPGISWLDDDGVFVSRYWRPKEKTPSGYPRVVKRLKRGKLFE 197 (648)
T ss_pred CCCCEEEEEecCCCCcceEEEEEEecccccccCC-CccccceEEecCCCEEEecccCCcccCccCCchHhhhhhhccccc
Confidence 9999999999999999999999999999877654 22233499999887777765431 122 3455667777
Q ss_pred CCCCcEEEEeecC-CCeEEEEEeCCCCcEEEEEEccc--cccEEEEEECCCCC--ceeEee--ecccceeeeEeecCCEE
Q 006375 161 DQSNDICLYHEKD-DIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPE--ELRVLT--PRVVGVDTAASHRGNHF 233 (648)
Q Consensus 161 ~~~~~~~~~~~~~-~~~~~~~~~s~Dg~~l~~~~~~~--~~~~l~~~dl~~~~--~~~~l~--~~~~~~~~~~s~dg~~l 233 (648)
++..+..+....+ ..+......+.|+++++....-. +...++ +++-+.. ....|. .+.+.. ....+.+.+
T Consensus 198 ~~~~dv~V~a~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~-l~~p~~~~~~~~~l~~~~r~dw~--~~~~~~g~l 274 (648)
T COG1505 198 GQEGDVMVNARGDQDPWGFRLVLSEDGDFFMLSLWLGTSGKGLIK-LGLPDKVGYEWGKLVNTLRADWT--FADVDYGLL 274 (648)
T ss_pred CCCCceEEecccccCCccceEEEeeccchhhheeeEeccCCCcee-ccCCccccceeeeeeEeeccccc--ccCcccceE
Confidence 8778888876543 12223344555555544322111 111222 2221110 011110 011000 011112233
Q ss_pred EEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCcee
Q 006375 234 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSV 313 (648)
Q Consensus 234 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i 313 (648)
++.+... .. . +....++.+.+...++.+...++++++...++..+++.++... +.. .+++
T Consensus 275 ~l~~~e~-~~----------~-g~~~a~~~P~~~~~le~v~tt~~~~va~~l~nv~~~l~v~~~~--g~~------~~~v 334 (648)
T COG1505 275 YLLTDED-LE----------L-GKVIAEFIPEEEQSLEQVVTTKDKLVAGTLDNVSGRLEVYDLK--GER------IEEV 334 (648)
T ss_pred EEEehhc-cc----------c-CceeEEecCCcccceeeeEEEcCeEEeeeehhccceEEEeccC--ceE------eeec
Confidence 3333321 11 1 1111144445566799999999999999999999999998877 432 2467
Q ss_pred ecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCcEEEEEEeeecCCCCCCCcceEEEEEeCCCCeEEeEEE
Q 006375 314 EFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICI 393 (648)
Q Consensus 314 ~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~i~~~l 393 (648)
.+|.+. ++.....+.+++++++.++|+++|+++|+++..+++++..+ ..+..|+++.+.+++.+.+|+||++||.++
T Consensus 335 ~l~~~g-a~~~~~~~~~g~ev~l~~t~F~tP~~~~r~~~~~~eLe~ik--~~p~~FDa~~~~veQ~~atSkDGT~IPYFi 411 (648)
T COG1505 335 ELPPPG-ALGMGSADKDGDEVFLAFTSFTTPSTLYRLDLFGGELEVIR--EQPVQFDADNYEVEQFFATSKDGTRIPYFI 411 (648)
T ss_pred ccCCcc-ceeeccCCCCCcEEEEEeecccCCCceEEEecCCceehhhh--hccCCcCccCceEEEEEEEcCCCccccEEE
Confidence 776654 45445677899999999999999999999999999865544 334589999999999999999999999999
Q ss_pred EEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHH
Q 006375 394 VYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA 473 (648)
Q Consensus 394 ~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~ 473 (648)
++ |+. +.+ ++|++|+.||||+.+..|.|+.....|+++|.+.+++|.|||||||..||+++++.++++.++|++|++
T Consensus 412 v~-K~~-~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVa 488 (648)
T COG1505 412 VR-KGA-KKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVA 488 (648)
T ss_pred Ee-cCC-cCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHH
Confidence 98 776 566 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHHHHHHH
Q 006375 474 EYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYM 553 (648)
Q Consensus 474 ~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 553 (648)
+.|++++++.|++|+|.|+|+||+|++++++|+|++|.|+||.+|++||+++. .++....+..|||+|.+|+.++.|
T Consensus 489 edLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh---~l~aG~sW~~EYG~Pd~P~d~~~l 565 (648)
T COG1505 489 EDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYH---LLTAGSSWIAEYGNPDDPEDRAFL 565 (648)
T ss_pred HHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhc---ccccchhhHhhcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999986 344334444899999999999999
Q ss_pred HcCCccccCCC-CCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHH
Q 006375 554 KSYSPVDNVKA-QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTF 632 (648)
Q Consensus 554 ~~~sp~~~~~~-~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 632 (648)
.+||||+|++. ++|||+||+++++|+||.|.|++||+++|++++.+ ++|.++.++||++..+..+..++.++.++|
T Consensus 566 ~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~p---v~~~e~t~gGH~g~~~~~~~A~~~a~~~af 642 (648)
T COG1505 566 LAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAP---VLLREETKGGHGGAAPTAEIARELADLLAF 642 (648)
T ss_pred HhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCc---eEEEeecCCcccCCCChHHHHHHHHHHHHH
Confidence 99999999999 59999999999999999999999999999999854 678888899999998888889999999999
Q ss_pred HHHhcC
Q 006375 633 LMRALS 638 (648)
Q Consensus 633 l~~~l~ 638 (648)
|.+.|+
T Consensus 643 l~r~L~ 648 (648)
T COG1505 643 LLRTLG 648 (648)
T ss_pred HHHhhC
Confidence 999885
No 5
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-44 Score=396.03 Aligned_cols=522 Identities=19% Similarity=0.218 Sum_probs=347.5
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEecCC-eEEEEEeCC----CC---------
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDE----IL--------- 148 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg-~l~y~~~~~----~~--------- 148 (648)
...+.|||||+.+++.... +....++|+++.+ | ........ .....|+|+| .+.+..... .+
T Consensus 62 ~~~~~~spdg~~~~~~~~~-~~~~~~l~l~~~~-g-~~~~~~~~-v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (620)
T COG1506 62 VSELRWSPDGSVLAFVSTD-GGRVAQLYLVDVG-G-LITKTAFG-VSDARWSPDGDRIAFLTAEGASKRDGGDHLFVDRL 137 (620)
T ss_pred ccccccCCCCCEEEEEecc-CCCcceEEEEecC-C-ceeeeecc-cccceeCCCCCeEEEEecccccccCCceeeeeccc
Confidence 3467889999999999843 4447899999998 5 22212222 3458899999 887732211 01
Q ss_pred ---------CCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEcccc----ccEEEEEECCCCCceeEe
Q 006375 149 ---------RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI----TRFVFYLDVSKPEELRVL 215 (648)
Q Consensus 149 ---------~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~----~~~l~~~dl~~~~~~~~l 215 (648)
+..++|..+.++ ...... ....-...+.+..+++.++....... ....++....++. ...+
T Consensus 138 ~~~~~~~g~~~~~l~~~d~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 211 (620)
T COG1506 138 PVWFDGRGGERSDLYVVDIES----KLIKLG-LGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGE-LESL 211 (620)
T ss_pred ceeecCCCCcccceEEEccCc----cccccc-CCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCCc-eEEE
Confidence 122233333222 000000 01112234556666666665443332 1334444334444 5555
Q ss_pred eecccc-eeeeEeecCCEEEEEeccCC---CCCcEEEEEeCCCCCcceeEecCCC---CcccceEEEeCCEEEEEEec-C
Q 006375 216 TPRVVG-VDTAASHRGNHFFITRRSDE---LFNSELLACPVDNTSETTVLIPHRE---SVKLQDIQLFIDHLAVYERE-G 287 (648)
Q Consensus 216 ~~~~~~-~~~~~s~dg~~l~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~-~ 287 (648)
++.... ....++++|+.+++..+... .....++..+.+. ........... ..........++.+++.... .
T Consensus 212 ~~~~~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (620)
T COG1506 212 TPGEGSISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGEL-GEVDGDLSSGDDTRGAWAVEGGLDGDGLLFIATDGG 290 (620)
T ss_pred cCCCceeeeeeeCCCCCeeEEeccCCccCccccceEEEEeccc-cccceeeccCCcccCcHHhccccCCCcEEEEEecCC
Confidence 554333 23458899998888877533 2334555555221 11110111110 00011111344566656555 3
Q ss_pred CeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCcEEEEEEeeecC
Q 006375 288 GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLG 367 (648)
Q Consensus 288 ~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~ 367 (648)
+... ++.+...+.. ..+. ..+...+.++. .+++.+++.++++.+|+++|.++. ..+.++... ...
T Consensus 291 g~~~--l~~~~~~~~~-------~~~~-~~~~~~v~~f~--~~~~~~~~~~s~~~~p~~i~~~~~-~~~~~~~~~--~~~ 355 (620)
T COG1506 291 GSSP--LFRVDDLGGG-------VEGL-SGDDGGVPGFD--VDGRKLALAYSSPTEPPEIYLYDR-GEEAKLTSS--NNS 355 (620)
T ss_pred CceE--EEEEeccCCc-------eeee-cCCCceEEEEe--eCCCEEEEEecCCCCccceEEEcC-CCceEEeec--ccc
Confidence 3333 3333211111 1111 11112343333 388899999999999999999987 333222211 111
Q ss_pred CCC-CCCcceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCC
Q 006375 368 GFD-TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG 446 (648)
Q Consensus 368 ~~~-~~~~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~ 446 (648)
... ......+.+++++.||.+|+++++.|++. ++.+++|+||++|||+.......|....+.|+++||+|+.+|+||+
T Consensus 356 ~~~~~~~~~~e~~~~~~~dG~~i~~~l~~P~~~-~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS 434 (620)
T COG1506 356 GLKKVKLAEPEPVTYKSNDGETIHGWLYKPPGF-DPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGS 434 (620)
T ss_pred cccccccCCceEEEEEcCCCCEEEEEEecCCCC-CCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCC
Confidence 121 22346799999999999999999999987 7777799999999999888888899999999999999999999999
Q ss_pred CCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccc
Q 006375 447 GELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 526 (648)
Q Consensus 447 g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 526 (648)
+|||++|.++..+.++...++|+.+++++|.+.+.+|++||+|+|+|+||+|+++++++.| +|+|+++..+.+|.+.++
T Consensus 435 ~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~ 513 (620)
T COG1506 435 TGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYF 513 (620)
T ss_pred CccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999887 899999999988877766
Q ss_pred cCCCCCCCcccccccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEE
Q 006375 527 LDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 606 (648)
Q Consensus 527 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 606 (648)
...+..+........+.+.. ..+.+.+.||+.++.++++| +||+||++|.+||+.|+++|+++|+..|+++++++|+
T Consensus 514 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~sp~~~~~~i~~P-~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p 590 (620)
T COG1506 514 GESTEGLRFDPEENGGGPPE--DREKYEDRSPIFYADNIKTP-LLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFP 590 (620)
T ss_pred cccchhhcCCHHHhCCCccc--ChHHHHhcChhhhhcccCCC-EEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeC
Confidence 54343332211111223321 22345789999999999999 9999999999999999999999999999999999998
Q ss_pred ecCCCCccCCCchHHHHHHHHHHHHHHHHhcCC
Q 006375 607 CELGAGHFSKSGRFERLREAAFTYTFLMRALSM 639 (648)
Q Consensus 607 ~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 639 (648)
+++|..... ......+..+++|+.++|+.
T Consensus 591 ---~e~H~~~~~-~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 591 ---DEGHGFSRP-ENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred ---CCCcCCCCc-hhHHHHHHHHHHHHHHHhcC
Confidence 678876542 22334455678999999874
No 6
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=100.00 E-value=2.5e-41 Score=358.89 Aligned_cols=338 Identities=35% Similarity=0.611 Sum_probs=273.6
Q ss_pred CHHHHhhccCCCCCCCCeEeCCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEEecccccCCCCc
Q 006375 1 MFAELKGRIKQEDVSAPFRQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGF 80 (648)
Q Consensus 1 ~~~~~~~r~~~~~~s~p~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~ 80 (648)
|+++|++++..++.++|.+.|+|+||.++.++++++++||+..... +...+|+|||+|+++.++++
T Consensus 58 l~~~~~~~~~~~~~~~p~~~g~~~y~~~~~~~~~~~~~~r~~~~~~--------------~~~~~evllD~n~l~~~~~~ 123 (414)
T PF02897_consen 58 LYEELKARINEDRESVPVRRGGYYYYSRNQGGKNYPVLYRRKTDEE--------------DGPEEEVLLDPNELAKDGGY 123 (414)
T ss_dssp HHHHHHHHCSSSEE---EEETTEEEEEEE-SS-SS-EEEEEETTS---------------TS-C-EEEEEGGGGSTTSS-
T ss_pred HHHHHHhhccCCCccccEEECCeEEEEEEcCCCceEEEEEEecccC--------------CCCceEEEEcchHhhccCce
Confidence 4688899988899999999999999999999999999999997520 01235999999999986668
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccce-eEEecCC-eEEEEEeCCCCC------Cce
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTAS-VEWAGNE-ALVYITMDEILR------PDK 152 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~-~~WspDg-~l~y~~~~~~~~------~~~ 152 (648)
+.++.+.+||||++|||+.+.+|+|+++|+|+|+++|+.+.+.+.+.... ++|++|| .|+|++.+...+ +.+
T Consensus 124 ~~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 124 VSLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp EEEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred EEeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 88889999999999999999999999999999999999888777766443 9999999 999999987666 899
Q ss_pred EEEEECCCCCCCcEEEEeecCCCe-EEEEEeCCCCcEEEEEEccccc-cEEEEEECCCC---C-ceeEeeecccceeeeE
Q 006375 153 AWLHKLEADQSNDICLYHEKDDIY-SLGLQASESKKFLFIASESKIT-RFVFYLDVSKP---E-ELRVLTPRVVGVDTAA 226 (648)
Q Consensus 153 l~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~s~Dg~~l~~~~~~~~~-~~l~~~dl~~~---~-~~~~l~~~~~~~~~~~ 226 (648)
||+|.++++++++++||++.+..+ ++++.+|+||++|++.+.+... +++|++|+..+ . .++++.++..+..+.+
T Consensus 204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v 283 (414)
T PF02897_consen 204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYV 283 (414)
T ss_dssp EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEE
T ss_pred EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEE
Confidence 999999999888899999988777 8899999999999999988887 99999999985 2 4888888888888888
Q ss_pred eecCCEEEEEeccCCCCCcEEEEEeCCCCCccee---EecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCc
Q 006375 227 SHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEP 303 (648)
Q Consensus 227 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~ 303 (648)
.+.|+.+|+.+|. ++++++|++++++.+....| ++++.++..+.++..++++|++..++++.++|.+++++. +..
T Consensus 284 ~~~~~~~yi~Tn~-~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~-~~~ 361 (414)
T PF02897_consen 284 DHHGDRLYILTND-DAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDD-GKE 361 (414)
T ss_dssp EEETTEEEEEE-T-T-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT--TEE
T ss_pred EccCCEEEEeeCC-CCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCC-CcE
Confidence 8889999999996 78999999999988664333 777777778999999999999999999999999999881 221
Q ss_pred ccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCcEEEEE
Q 006375 304 LKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKK 361 (648)
Q Consensus 304 ~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~ 361 (648)
...+.+|.. +++.+.+.+++++.++|.++|+++|+++|.||+.++++++++
T Consensus 362 ------~~~~~~p~~-g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~~~k 412 (414)
T PF02897_consen 362 ------SREIPLPEA-GSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELTLLK 412 (414)
T ss_dssp ------EEEEESSSS-SEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEEEEE
T ss_pred ------EeeecCCcc-eEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEEEEE
Confidence 135556553 356667788999999999999999999999999999976655
No 7
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=100.00 E-value=1.3e-32 Score=264.48 Aligned_cols=211 Identities=33% Similarity=0.480 Sum_probs=169.7
Q ss_pred CCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHH
Q 006375 422 PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 501 (648)
Q Consensus 422 ~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 501 (648)
|+|+...+.|+++||+|+.+|+||++++|.+|+..+....+...++|+.+++++|++++.+|++||+|+|+|+||++++.
T Consensus 1 ~~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~ 80 (213)
T PF00326_consen 1 PSFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALL 80 (213)
T ss_dssp ---SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHH
T ss_pred CeeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccch
Confidence 45777888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCC-CCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCc
Q 006375 502 VLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPR 580 (648)
Q Consensus 502 ~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~ 580 (648)
++.++|++|+|+|+.+|++|+......... +...++.+++.+ ..++.+..+..++++.++. ++.| +||+||++|++
T Consensus 81 ~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~P-~li~hG~~D~~ 157 (213)
T PF00326_consen 81 AATQHPDRFKAAVAGAGVSDLFSYYGTTDI-YTKAEYLEYGDPWDNPEFYRELSPISPADNVQ-IKPP-VLIIHGENDPR 157 (213)
T ss_dssp HHHHTCCGSSEEEEESE-SSTTCSBHHTCC-HHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCG-GGSE-EEEEEETTBSS
T ss_pred hhcccceeeeeeeccceecchhcccccccc-cccccccccCccchhhhhhhhhcccccccccc-CCCC-EEEEccCCCCc
Confidence 999999999999999999998876543222 222244667777 4566665555455554432 4555 99999999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHhcCC
Q 006375 581 VMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 639 (648)
Q Consensus 581 v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 639 (648)
||+.++.+++++|++++++.++++++ ++||......... +....+++||.++|+.
T Consensus 158 Vp~~~s~~~~~~L~~~g~~~~~~~~p---~~gH~~~~~~~~~-~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 158 VPPSQSLRLYNALRKAGKPVELLIFP---GEGHGFGNPENRR-DWYERILDFFDKYLKK 212 (213)
T ss_dssp STTHHHHHHHHHHHHTTSSEEEEEET---T-SSSTTSHHHHH-HHHHHHHHHHHHHTT-
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEEcC---cCCCCCCCchhHH-HHHHHHHHHHHHHcCC
Confidence 99999999999999999998888886 8899665544433 5566889999999975
No 8
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=8.9e-28 Score=265.77 Aligned_cols=342 Identities=18% Similarity=0.177 Sum_probs=234.5
Q ss_pred eCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEE-EECCC
Q 006375 276 FIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYD-YDMDM 354 (648)
Q Consensus 276 ~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~-~d~~~ 354 (648)
+.+.+++........+-.++.++........++-. .. ...+.+.++..+.....+....+.+..|...+. .+...
T Consensus 398 ~~~~i~f~~~~~~~~~~~ly~i~~~~~~~~~lt~~-~~---~~~~~~~~~~~~~~~~~~v~~~~gP~~p~~~~~~~~~~~ 473 (755)
T KOG2100|consen 398 DSNRIYFDAYEEDPSERHLYSISLGSGTVESLTCS-LI---TGPCTYLSVSFSKSAKYYVLSCSGPKVPDGQLTRHSSKN 473 (755)
T ss_pred CCceEEEEecCCCCCceEEEEEEcccccccccccc-CC---CCcceEEEEecCCcccEEEEEccCCCCCcceeecccccc
Confidence 33566666666544444444444323322222211 11 111223334555566677778888877754221 11111
Q ss_pred CcEEEEEEeee------cCCCCCCCcceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCC-CCchh
Q 006375 355 GISVLKKIETV------LGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-AFNSS 427 (648)
Q Consensus 355 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~-~~~~~ 427 (648)
.+ +...+... ...+..+....+.+.+ +|....+.++.|++. ...++.|+||.+|||+++..-. .|...
T Consensus 474 ~~-~~~~Le~n~~~~~~~~~~~~p~~~~~~i~~---~~~~~~~~~~lP~~~-~~~~kyPllv~~yGGP~sq~v~~~~~~~ 548 (755)
T KOG2100|consen 474 SK-TIVVLETNEELKKTIENVALPIVEFGKIEI---DGITANAILILPPNF-DPSKKYPLLVVVYGGPGSQSVTSKFSVD 548 (755)
T ss_pred ce-EEEEeccChhhHHHhhcccCCcceeEEEEe---ccEEEEEEEecCCCC-CCCCCCCEEEEecCCCCcceeeeeEEec
Confidence 11 12222111 1112222223344444 888899999999998 7788999999999999854322 23322
Q ss_pred --HHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhh
Q 006375 428 --RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 505 (648)
Q Consensus 428 --~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 505 (648)
...+..+|++|+.+|+||+|++|.++..+..+..+...++|.+.+++++.+++++|++||+|+|+|+||++++.++..
T Consensus 549 ~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~ 628 (755)
T KOG2100|consen 549 WNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLES 628 (755)
T ss_pred HHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhh
Confidence 345667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CceeEEEecCCcccccccccCCCCCCCccccccc-CCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCC
Q 006375 506 RP-DLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW-GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMY 583 (648)
Q Consensus 506 ~p-~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~ 583 (648)
.| +.|+|+|+.+|++|+. +. +.. .-++| |.|...... +...++..++..++.|..|++||+.|++|++
T Consensus 629 ~~~~~fkcgvavaPVtd~~-~y-ds~------~terymg~p~~~~~~--y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~ 698 (755)
T KOG2100|consen 629 DPGDVFKCGVAVAPVTDWL-YY-DST------YTERYMGLPSENDKG--YEESSVSSPANNIKTPKLLLIHGTEDDNVHF 698 (755)
T ss_pred CcCceEEEEEEecceeeee-ee-ccc------ccHhhcCCCccccch--hhhccccchhhhhccCCEEEEEcCCcCCcCH
Confidence 87 7899999999999987 33 111 11344 666432211 2456777777777777679999999999999
Q ss_pred chHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHhcCCC
Q 006375 584 SEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 640 (648)
Q Consensus 584 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 640 (648)
.|+.+++++|+.+|++.++++|+ ++.|+....... ......+..||..+++..
T Consensus 699 q~s~~~~~aL~~~gv~~~~~vyp---de~H~is~~~~~-~~~~~~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 699 QQSAILIKALQNAGVPFRLLVYP---DENHGISYVEVI-SHLYEKLDRFLRDCFGSP 751 (755)
T ss_pred HHHHHHHHHHHHCCCceEEEEeC---CCCcccccccch-HHHHHHHHHHHHHHcCcc
Confidence 99999999999999999999998 678976543311 122335678999877753
No 9
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=3.3e-28 Score=245.98 Aligned_cols=329 Identities=20% Similarity=0.244 Sum_probs=239.3
Q ss_pred EEEEEecCCe--eEEEEEEcCCCCCcccccCCCceeecCCCeeeee-CCCCcccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 280 LAVYEREGGL--QKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSID-PSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 280 l~~~~~~~~~--~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~-~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
+++....++. ..|++..+...|. ... +.+++++-. .++.+.+ .+..-++|-..|+.+..|.+.+++
T Consensus 518 VYf~gt~d~PlE~hLyvvsye~~g~-~~r--------lt~~g~sh~~~l~~~~d--~fv~~~~sv~sP~cv~~y~ls~~~ 586 (867)
T KOG2281|consen 518 VYFVGTKDTPLEHHLYVVSYENPGE-IAR--------LTEPGYSHSCELDQQCD--HFVSYYSSVGSPPCVSLYSLSWPE 586 (867)
T ss_pred EEEEccCCCCceeeEEEEEEecCCc-eee--------ccCCCcccchhhhhhhh--hHhhhhhcCCCCceEEEEeccCCc
Confidence 3444445542 3677777663333 222 233343321 1222233 367778889999999888887765
Q ss_pred EEEE-EEee---e--cCCCCCCCcce-EEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCC-CCCchh-
Q 006375 357 SVLK-KIET---V--LGGFDTNNYFT-ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSS- 427 (648)
Q Consensus 357 ~~~~-~~~~---~--~~~~~~~~~~~-~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~-~~~~~~- 427 (648)
-..+ +... . .+.-.+++|+. +.+.+.+..|..+.+.++.|.++ ++.+|+|+++++|||++.+.- .+|...
T Consensus 587 ~~~l~~q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~-~pgkkYptvl~VYGGP~VQlVnnsfkgi~ 665 (867)
T KOG2281|consen 587 NDPLPKQVSFWAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNF-QPGKKYPTVLNVYGGPGVQLVNNSFKGIQ 665 (867)
T ss_pred cCcccchhhHHHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccC-CCCCCCceEEEEcCCCceEEeecccccee
Confidence 2111 1110 0 12234556654 77888888899999998888887 888999999999999988643 445432
Q ss_pred ---HHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHc-CCCCCCeEEEEeeChhHHHHHHHH
Q 006375 428 ---RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVL 503 (648)
Q Consensus 428 ---~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~ 503 (648)
...|+++||+|+++|-||+--.|.+|........++-.++|.+.++++|.++ |++|++||+|-|+|+||+|++.++
T Consensus 666 ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L 745 (867)
T KOG2281|consen 666 YLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGL 745 (867)
T ss_pred hhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHh
Confidence 3588899999999999999999999988888888888999999999999988 599999999999999999999999
Q ss_pred hhCCCceeEEEecCCcccccccccCCCCCCCccccccc-CCCC-CHHHHHHHHcCCccccCCCC-CCC-eEEEeecCCCC
Q 006375 504 NMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW-GDPW-KEEFYFYMKSYSPVDNVKAQ-NYP-HILVTAGLNDP 579 (648)
Q Consensus 504 ~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~sp~~~~~~~-~~P-~~li~~g~~D~ 579 (648)
+++|+.|+++|+.+|++++.-+- + .++ +.| |-|. ++..+ .+-|-..++.+. +-| .+|++||.-|.
T Consensus 746 ~~~P~IfrvAIAGapVT~W~~YD---T-gYT----ERYMg~P~~nE~gY---~agSV~~~VeklpdepnRLlLvHGliDE 814 (867)
T KOG2281|consen 746 AQYPNIFRVAIAGAPVTDWRLYD---T-GYT----ERYMGYPDNNEHGY---GAGSVAGHVEKLPDEPNRLLLVHGLIDE 814 (867)
T ss_pred hcCcceeeEEeccCcceeeeeec---c-cch----hhhcCCCccchhcc---cchhHHHHHhhCCCCCceEEEEeccccc
Confidence 99999999999999999986442 1 111 223 6773 44333 344555666655 334 49999999999
Q ss_pred ccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHH
Q 006375 580 RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 635 (648)
Q Consensus 580 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 635 (648)
.|...|...++.+|.++|++.++.+|+ +.-|........ ..-.+.++.||.+
T Consensus 815 NVHF~Hts~Lvs~lvkagKpyeL~IfP---~ERHsiR~~es~-~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 815 NVHFAHTSRLVSALVKAGKPYELQIFP---NERHSIRNPESG-IYYEARLLHFLQE 866 (867)
T ss_pred chhhhhHHHHHHHHHhCCCceEEEEcc---ccccccCCCccc-hhHHHHHHHHHhh
Confidence 999999999999999999999999998 558865433222 2223467888865
No 10
>PRK13604 luxD acyl transferase; Provisional
Probab=99.87 E-value=2.3e-21 Score=189.08 Aligned_cols=226 Identities=16% Similarity=0.130 Sum_probs=154.8
Q ss_pred cceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCC-CCCChh
Q 006375 374 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG-GELGRQ 452 (648)
Q Consensus 374 ~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~-g~~g~~ 452 (648)
+.+....+.+.||.+|.+|+..|++. ...+.|+||++||- +... ..|...+..|+++||+|+.+|.||+ |+.+.+
T Consensus 7 ~~~~~~~~~~~dG~~L~Gwl~~P~~~--~~~~~~~vIi~HGf-~~~~-~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~ 82 (307)
T PRK13604 7 FKTIDHVICLENGQSIRVWETLPKEN--SPKKNNTILIASGF-ARRM-DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGT 82 (307)
T ss_pred ccchhheEEcCCCCEEEEEEEcCccc--CCCCCCEEEEeCCC-CCCh-HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCc
Confidence 34455567788999999998888753 24567899999993 3332 2366677899999999999999987 777666
Q ss_pred hhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCC---
Q 006375 453 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP--- 529 (648)
Q Consensus 453 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~--- 529 (648)
+...... ....|+.++++|+.+++ ..+|++.|+||||.++..+|+.. .++++|+.+|+.++.......
T Consensus 83 ~~~~t~s----~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~ 153 (307)
T PRK13604 83 IDEFTMS----IGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGY 153 (307)
T ss_pred cccCccc----ccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhc
Confidence 6432221 13689999999998863 46899999999999987766643 389999999999855332110
Q ss_pred ---CCCCCcc-ccccc-CCCC-CHHHHHHHHc------CCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcC
Q 006375 530 ---TIPLTTA-EWEEW-GDPW-KEEFYFYMKS------YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK 597 (648)
Q Consensus 530 ---~~~~~~~-~~~~~-g~~~-~~~~~~~~~~------~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~ 597 (648)
.+|.... ....+ |.+- .....+...+ .+|.+.+++++.| +|++||++|+.||+.++++++++++.
T Consensus 154 ~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~P-vLiIHG~~D~lVp~~~s~~l~e~~~s-- 230 (307)
T PRK13604 154 DYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIP-FIAFTANNDSWVKQSEVIDLLDSIRS-- 230 (307)
T ss_pred ccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCC-EEEEEcCCCCccCHHHHHHHHHHhcc--
Confidence 0111000 00001 1111 1112222212 3455777777888 99999999999999999999998764
Q ss_pred CCCCeEEEEecCCCCccCCCc
Q 006375 598 TDDNILLFKCELGAGHFSKSG 618 (648)
Q Consensus 598 ~~~~~~~~~~~~~~gH~~~~~ 618 (648)
.+++++.++ +++|....+
T Consensus 231 ~~kkl~~i~---Ga~H~l~~~ 248 (307)
T PRK13604 231 EQCKLYSLI---GSSHDLGEN 248 (307)
T ss_pred CCcEEEEeC---CCccccCcc
Confidence 345566665 999976544
No 11
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.86 E-value=1e-20 Score=174.08 Aligned_cols=248 Identities=21% Similarity=0.253 Sum_probs=177.5
Q ss_pred CCCCCcceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCC
Q 006375 369 FDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE 448 (648)
Q Consensus 369 ~~~~~~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~ 448 (648)
+..+..++-++++++.+|.+|.+|++.|+.. .++.|+||..||-.+... +-..+..|+..||+|+.+|+||.|+
T Consensus 49 ~~~~~ve~ydvTf~g~~g~rI~gwlvlP~~~---~~~~P~vV~fhGY~g~~g---~~~~~l~wa~~Gyavf~MdvRGQg~ 122 (321)
T COG3458 49 FTLPRVEVYDVTFTGYGGARIKGWLVLPRHE---KGKLPAVVQFHGYGGRGG---EWHDMLHWAVAGYAVFVMDVRGQGS 122 (321)
T ss_pred ccCCceEEEEEEEeccCCceEEEEEEeeccc---CCccceEEEEeeccCCCC---CccccccccccceeEEEEecccCCC
Confidence 3445667888999999999999999999864 488999999999333322 2234678888999999999999887
Q ss_pred CChh------------hhhcccccCCC-----CcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCcee
Q 006375 449 LGRQ------------WYENGKFLKKK-----NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFK 511 (648)
Q Consensus 449 ~g~~------------~~~~~~~~~~~-----~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~ 511 (648)
+..+ |+..|..+.+. ..+.|...+++-+.....+|++||++.|+|.||.|++++++..| +++
T Consensus 123 ~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik 201 (321)
T COG3458 123 SSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIK 201 (321)
T ss_pred ccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhh
Confidence 6331 22222223222 47899999999999999999999999999999999999999876 799
Q ss_pred EEEecCCcccccccccCCCCCCCcccccc------cCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCch
Q 006375 512 AAVAAVPFVDVLTTMLDPTIPLTTAEWEE------WGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSE 585 (648)
Q Consensus 512 a~v~~~~~~d~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~ 585 (648)
++++.+|++.=...... + .+...|.| .-.|.+.+.++.+.-++-.+-+.+++.| +|+..|..|++|||+-
T Consensus 202 ~~~~~~Pfl~df~r~i~--~-~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~p-vL~svgL~D~vcpPst 277 (321)
T COG3458 202 AVVADYPFLSDFPRAIE--L-ATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVP-VLMSVGLMDPVCPPST 277 (321)
T ss_pred cccccccccccchhhee--e-cccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccc-eEEeecccCCCCCChh
Confidence 99999998753332221 1 11112211 1234466777777766777777788998 9999999999999999
Q ss_pred HHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHhcC
Q 006375 586 PAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 638 (648)
Q Consensus 586 ~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 638 (648)
...+++++...+ ..-+|+. -+|........ ..++.|+....+
T Consensus 278 qFA~yN~l~~~K---~i~iy~~---~aHe~~p~~~~-----~~~~~~l~~l~~ 319 (321)
T COG3458 278 QFAAYNALTTSK---TIEIYPY---FAHEGGPGFQS-----RQQVHFLKILFG 319 (321)
T ss_pred hHHHhhcccCCc---eEEEeec---cccccCcchhH-----HHHHHHHHhhcc
Confidence 888898886432 3334542 35855433211 134567766554
No 12
>PRK10566 esterase; Provisional
Probab=99.85 E-value=4.7e-20 Score=182.06 Aligned_cols=233 Identities=16% Similarity=0.148 Sum_probs=146.5
Q ss_pred EeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhccccc---CCCCc
Q 006375 389 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL---KKKNT 465 (648)
Q Consensus 389 i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~---~~~~~ 465 (648)
++...+.|+.. .+++.|+||++||..+.. ..|...+..|+++||.|+++|+||+|............. .-...
T Consensus 12 ~~~~~~~p~~~--~~~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~ 87 (249)
T PRK10566 12 IEVLHAFPAGQ--RDTPLPTVFFYHGFTSSK--LVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQN 87 (249)
T ss_pred cceEEEcCCCC--CCCCCCEEEEeCCCCccc--chHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHH
Confidence 44555666542 235689999999965443 235666788899999999999999774210000000000 00134
Q ss_pred HhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEe-cCCcccccccccCCCCCCCcccccccCCC
Q 006375 466 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA-AVPFVDVLTTMLDPTIPLTTAEWEEWGDP 544 (648)
Q Consensus 466 ~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~-~~~~~d~~~~~~~~~~~~~~~~~~~~g~~ 544 (648)
.+|+.++++++.+++.+|+++|+++|+|+||++++.++.++|+..++++. ..+..+.......+.... . ......
T Consensus 88 ~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~ 163 (249)
T PRK10566 88 MQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIP---E-TAAQQA 163 (249)
T ss_pred HHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcccccc---c-ccccHH
Confidence 68888999999998889999999999999999999999988874433332 233222111000000000 0 000000
Q ss_pred CCHHHHHHHHcCCccccCCCC-CCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHH
Q 006375 545 WKEEFYFYMKSYSPVDNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERL 623 (648)
Q Consensus 545 ~~~~~~~~~~~~sp~~~~~~~-~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 623 (648)
...+....+..+++...+.++ .+| +|++||++|..||+.++++++++++.++.+.+.. +...+++||... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~i~~~P-~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~-~~~~~~~~H~~~---~--- 235 (249)
T PRK10566 164 EFNNIVAPLAEWEVTHQLEQLADRP-LLLWHGLADDVVPAAESLRLQQALRERGLDKNLT-CLWEPGVRHRIT---P--- 235 (249)
T ss_pred HHHHHHHHHhhcChhhhhhhcCCCC-EEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceE-EEecCCCCCccC---H---
Confidence 011122233455666666665 677 9999999999999999999999999988764322 222348899753 1
Q ss_pred HHHHHHHHHHHHhc
Q 006375 624 REAAFTYTFLMRAL 637 (648)
Q Consensus 624 ~~~~~~~~fl~~~l 637 (648)
.....+.+||.++|
T Consensus 236 ~~~~~~~~fl~~~~ 249 (249)
T PRK10566 236 EALDAGVAFFRQHL 249 (249)
T ss_pred HHHHHHHHHHHhhC
Confidence 23456789999875
No 13
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.85 E-value=1e-19 Score=187.32 Aligned_cols=260 Identities=12% Similarity=0.089 Sum_probs=164.6
Q ss_pred CCCcceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCC
Q 006375 371 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 450 (648)
Q Consensus 371 ~~~~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g 450 (648)
+.++..+..++++.||.+|.+....|.+. ..+.|+||++||.... ....+......|+++||.|+++|+||+|...
T Consensus 27 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~---~~~~~~VvllHG~~~~-~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~ 102 (330)
T PLN02298 27 LKGIKGSKSFFTSPRGLSLFTRSWLPSSS---SPPRALIFMVHGYGND-ISWTFQSTAIFLAQMGFACFALDLEGHGRSE 102 (330)
T ss_pred ccCCccccceEEcCCCCEEEEEEEecCCC---CCCceEEEEEcCCCCC-cceehhHHHHHHHhCCCEEEEecCCCCCCCC
Confidence 44555666778889999999876655432 1346899999996432 2334455556788899999999999998654
Q ss_pred hhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccC--
Q 006375 451 RQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD-- 528 (648)
Q Consensus 451 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~-- 528 (648)
.. .+....-....+|+.+++++|......+..++.++|+||||.+++.++.++|++++++|+.+|+.++...+..
T Consensus 103 ~~---~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 179 (330)
T PLN02298 103 GL---RAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPW 179 (330)
T ss_pred Cc---cccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCch
Confidence 21 0100111234688999999998754344467999999999999999999999999999999987653221100
Q ss_pred ----------CCCCCCc-ccccc-cCC-CCCHHHHHHHHcCC----------------------ccccCCCCCCCeEEEe
Q 006375 529 ----------PTIPLTT-AEWEE-WGD-PWKEEFYFYMKSYS----------------------PVDNVKAQNYPHILVT 573 (648)
Q Consensus 529 ----------~~~~~~~-~~~~~-~g~-~~~~~~~~~~~~~s----------------------p~~~~~~~~~P~~li~ 573 (648)
...+... ..... ... ...+. ...+...+ ...++.++++| +||+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLii 257 (330)
T PLN02298 180 PIPQILTFVARFLPTLAIVPTADLLEKSVKVPA-KKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIP-FIVL 257 (330)
T ss_pred HHHHHHHHHHHHCCCCccccCCCcccccccCHH-HHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCC-EEEE
Confidence 0000000 00000 000 00000 00000001 11335567888 9999
Q ss_pred ecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHH-HHH-HHHHHHHHHHhcCCCCCCC
Q 006375 574 AGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER-LRE-AAFTYTFLMRALSMLPSVG 644 (648)
Q Consensus 574 ~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~-~~~-~~~~~~fl~~~l~~~~~~~ 644 (648)
||++|..||+.+++++++++... ..++++++ +++|.......+. .+. ...+.+||.++++....|+
T Consensus 258 ~G~~D~ivp~~~~~~l~~~i~~~--~~~l~~~~---~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~~~~ 325 (330)
T PLN02298 258 HGSADVVTDPDVSRALYEEAKSE--DKTIKIYD---GMMHSLLFGEPDENIEIVRRDILSWLNERCTGKATPS 325 (330)
T ss_pred ecCCCCCCCHHHHHHHHHHhccC--CceEEEcC---CcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCCCCc
Confidence 99999999999999998887643 34555664 8899765433322 222 3357899999998665554
No 14
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.83 E-value=3.6e-19 Score=186.49 Aligned_cols=240 Identities=17% Similarity=0.130 Sum_probs=155.8
Q ss_pred CcceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChh
Q 006375 373 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 452 (648)
Q Consensus 373 ~~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~ 452 (648)
.+..+.+.++..+|..|++++..|+. +++.|+||+.|| .+......|......|+++||+|+++|+||.|+...
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~----~~~~P~Vli~gG-~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~- 238 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKG----DGPFPTVLVCGG-LDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSK- 238 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCC----CCCccEEEEeCC-cccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCC-
Confidence 34578999999899889999888863 256788876555 444333335555678899999999999999876532
Q ss_pred hhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccccc--CCC
Q 006375 453 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML--DPT 530 (648)
Q Consensus 453 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~--~~~ 530 (648)
+. . .........+++++|.....+|++||+++|+|+||++++.++..+|++++++|+..|+++.+.... ...
T Consensus 239 ~~-----~-~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~ 312 (414)
T PRK05077 239 WK-----L-TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQ 312 (414)
T ss_pred CC-----c-cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhh
Confidence 11 0 111122335788999998889999999999999999999999988999999999998875221110 001
Q ss_pred CCCCccc-c-cccCCC-CC-HHHHHHHHcCCccc--c-CCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeE
Q 006375 531 IPLTTAE-W-EEWGDP-WK-EEFYFYMKSYSPVD--N-VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 603 (648)
Q Consensus 531 ~~~~~~~-~-~~~g~~-~~-~~~~~~~~~~sp~~--~-~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 603 (648)
.|..... + ...|.+ .+ ......+..++... . .+++++| +|++||++|++||+.+++.+.+... ..+++
T Consensus 313 ~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~P-vLiI~G~~D~ivP~~~a~~l~~~~~----~~~l~ 387 (414)
T PRK05077 313 VPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTP-MLSGYWKNDPFSPEEDSRLIASSSA----DGKLL 387 (414)
T ss_pred chHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCc-EEEEecCCCCCCCHHHHHHHHHhCC----CCeEE
Confidence 1110000 1 112332 22 22233344444221 1 2457888 9999999999999999987765443 34566
Q ss_pred EEEecCCCCccCCCchHHHHHHHHHHHHHHHHhc
Q 006375 604 LFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 637 (648)
Q Consensus 604 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 637 (648)
+++ ++.|. ..... .+..+.+||.++|
T Consensus 388 ~i~---~~~~~---e~~~~--~~~~i~~wL~~~l 413 (414)
T PRK05077 388 EIP---FKPVY---RNFDK--ALQEISDWLEDRL 413 (414)
T ss_pred Ecc---CCCcc---CCHHH--HHHHHHHHHHHHh
Confidence 666 43222 12221 2335689999886
No 15
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.83 E-value=4.7e-20 Score=184.83 Aligned_cols=246 Identities=20% Similarity=0.256 Sum_probs=161.0
Q ss_pred CCcceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCCh
Q 006375 372 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGR 451 (648)
Q Consensus 372 ~~~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~ 451 (648)
+...+..+.+.+.+|.+|.++++.|++. .++.|+||.+||..+.... -.....|+.+||+|+.+|.||.|+...
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~---~~~~Pavv~~hGyg~~~~~---~~~~~~~a~~G~~vl~~d~rGqg~~~~ 125 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNA---KGKLPAVVQFHGYGGRSGD---PFDLLPWAAAGYAVLAMDVRGQGGRSP 125 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-S---SSSEEEEEEE--TT--GGG---HHHHHHHHHTT-EEEEE--TTTSSSS-
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCC---CCCcCEEEEecCCCCCCCC---cccccccccCCeEEEEecCCCCCCCCC
Confidence 4567788999999999999999999854 4789999999994433211 122356889999999999999985443
Q ss_pred hhhh-----------cccccCCC-----CcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEe
Q 006375 452 QWYE-----------NGKFLKKK-----NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 515 (648)
Q Consensus 452 ~~~~-----------~~~~~~~~-----~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~ 515 (648)
+... .|....+. ..+.|...++++|.+...+|++||+++|.|.||.+++++++-.| +++++++
T Consensus 126 d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~ 204 (320)
T PF05448_consen 126 DYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAA 204 (320)
T ss_dssp B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEE
T ss_pred CccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEe
Confidence 3221 11111122 25689999999999999999999999999999999999999876 5999999
Q ss_pred cCCcc-ccccccc-CC-CCCCCc-ccccccCCC---CCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHH
Q 006375 516 AVPFV-DVLTTML-DP-TIPLTT-AEWEEWGDP---WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAK 588 (648)
Q Consensus 516 ~~~~~-d~~~~~~-~~-~~~~~~-~~~~~~g~~---~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~ 588 (648)
.+|++ |....+. .. ..++.. ..|-.+.++ ..++.++.+.-++..+-++++++| +|+..|..|+.|||.....
T Consensus 205 ~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~p-vl~~~gl~D~~cPP~t~fA 283 (320)
T PF05448_consen 205 DVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCP-VLFSVGLQDPVCPPSTQFA 283 (320)
T ss_dssp ESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SE-EEEEEETT-SSS-HHHHHH
T ss_pred cCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCC-EEEEEecCCCCCCchhHHH
Confidence 99964 4333221 11 122211 112222233 346677778888888889999998 9999999999999999888
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHh
Q 006375 589 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 636 (648)
Q Consensus 589 ~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 636 (648)
.++++.. ++++++++ ..||...... .....++||++|
T Consensus 284 ~yN~i~~---~K~l~vyp---~~~He~~~~~-----~~~~~~~~l~~~ 320 (320)
T PF05448_consen 284 AYNAIPG---PKELVVYP---EYGHEYGPEF-----QEDKQLNFLKEH 320 (320)
T ss_dssp HHCC--S---SEEEEEET---T--SSTTHHH-----HHHHHHHHHHH-
T ss_pred HHhccCC---CeeEEecc---CcCCCchhhH-----HHHHHHHHHhcC
Confidence 8888863 45677776 6788543221 112457899875
No 16
>PLN02442 S-formylglutathione hydrolase
Probab=99.81 E-value=2e-18 Score=172.41 Aligned_cols=223 Identities=16% Similarity=0.159 Sum_probs=142.8
Q ss_pred eEEEEEeC-CCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhH-HHHHHCCCEEEEEccCCCC------
Q 006375 376 TERKWASA-SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSR-LSLLDRGFIFAIAQIRGGG------ 447 (648)
Q Consensus 376 ~~~~~~~s-~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~-~~l~~~G~~v~~~~~rG~g------ 447 (648)
.+.+++.| .-|..+++.+++|+. ..+++.|+|+++||..+....+.+.... ..+...|++|++||..++|
T Consensus 18 ~~~~~~~s~~l~~~~~~~vy~P~~--~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~ 95 (283)
T PLN02442 18 NRRYKHFSSTLGCSMTFSVYFPPA--SDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGE 95 (283)
T ss_pred EEEEEEeccccCCceEEEEEcCCc--ccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCC
Confidence 45555555 456789999999984 3456799999999976654332222222 3445579999999986544
Q ss_pred ------CCChhhhhccc-ccCCC-C----cHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEe
Q 006375 448 ------ELGRQWYENGK-FLKKK-N----TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 515 (648)
Q Consensus 448 ------~~g~~~~~~~~-~~~~~-~----~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~ 515 (648)
++|..++.... ..++. . ..+++...++... ..+|+++++|+|+||||++++.++.++|++|+++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~ 173 (283)
T PLN02442 96 ADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNF--DQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSA 173 (283)
T ss_pred ccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHH--HhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEE
Confidence 11222211110 01100 1 1233333333322 236889999999999999999999999999999999
Q ss_pred cCCcccccccccCCCCCCCcccc-cccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCc-hHHHHHHHH
Q 006375 516 AVPFVDVLTTMLDPTIPLTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYS-EPAKFVAKL 593 (648)
Q Consensus 516 ~~~~~d~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~-~~~~~~~~l 593 (648)
.+|++|+.... ...... ..+|.+ ++.++.....+|+.++...+.| +|++||++|++|+.. +++.+++++
T Consensus 174 ~~~~~~~~~~~------~~~~~~~~~~g~~--~~~~~~~d~~~~~~~~~~~~~p-vli~~G~~D~~v~~~~~s~~~~~~l 244 (283)
T PLN02442 174 FAPIANPINCP------WGQKAFTNYLGSD--KADWEEYDATELVSKFNDVSAT-ILIDQGEADKFLKEQLLPENFEEAC 244 (283)
T ss_pred ECCccCcccCc------hhhHHHHHHcCCC--hhhHHHcChhhhhhhccccCCC-EEEEECCCCccccccccHHHHHHHH
Confidence 99998853211 101111 223443 2222222344555556555777 999999999999974 689999999
Q ss_pred HhcCCCCCeEEEEecCCCCcc
Q 006375 594 REMKTDDNILLFKCELGAGHF 614 (648)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~gH~ 614 (648)
++++.+.++.+++ +.+|.
T Consensus 245 ~~~g~~~~~~~~p---g~~H~ 262 (283)
T PLN02442 245 KEAGAPVTLRLQP---GYDHS 262 (283)
T ss_pred HHcCCCeEEEEeC---CCCcc
Confidence 9999887666665 77995
No 17
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.80 E-value=5.3e-17 Score=172.70 Aligned_cols=206 Identities=12% Similarity=0.118 Sum_probs=148.7
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
+..+.|||||++|||+...+| ..+||++|+++|+.... ..++....++||||| .|+|+...+ ...+||.+++.+
T Consensus 220 ~~~p~wSPDG~~La~~s~~~g--~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~--g~~~Iy~~dl~t 295 (448)
T PRK04792 220 LMSPAWSPDGRKLAYVSFENR--KAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKD--GQPEIYVVDIAT 295 (448)
T ss_pred ccCceECCCCCEEEEEEecCC--CcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCC--CCeEEEEEECCC
Confidence 457899999999999987665 57999999999886543 344444569999999 899876532 346799999988
Q ss_pred CCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeec-ccceeeeEeecCCEEEEEecc
Q 006375 161 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-VVGVDTAASHRGNHFFITRRS 239 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~-~~~~~~~~s~dg~~l~~~~~~ 239 (648)
+. ...+... ......+.|||||++|++.+...+..+||++|+++++ .+.++.. .......|+|||++|+|.+..
T Consensus 296 g~--~~~lt~~--~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~-~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~ 370 (448)
T PRK04792 296 KA--LTRITRH--RAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGK-VSRLTFEGEQNLGGSITPDGRSMIMVNRT 370 (448)
T ss_pred CC--eEECccC--CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC-EEEEecCCCCCcCeeECCCCCEEEEEEec
Confidence 73 2333221 2233467899999999998877777899999999887 6666532 122234699999999998775
Q ss_pred CCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCc
Q 006375 240 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEP 303 (648)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~ 303 (648)
...++|+++|++++ ..+.+.....+ .-..++++++.+++....++...+++++.+ |..
T Consensus 371 --~g~~~I~~~dl~~g-~~~~lt~~~~d-~~ps~spdG~~I~~~~~~~g~~~l~~~~~~--G~~ 428 (448)
T PRK04792 371 --NGKFNIARQDLETG-AMQVLTSTRLD-ESPSVAPNGTMVIYSTTYQGKQVLAAVSID--GRF 428 (448)
T ss_pred --CCceEEEEEECCCC-CeEEccCCCCC-CCceECCCCCEEEEEEecCCceEEEEEECC--CCc
Confidence 34578999999873 33323322222 123567777788888888888889988876 553
No 18
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.80 E-value=6.6e-18 Score=168.43 Aligned_cols=241 Identities=17% Similarity=0.142 Sum_probs=151.8
Q ss_pred EEEEEeCC-CCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHH-CCCEEEEEcc--CCCCCCC--
Q 006375 377 ERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQI--RGGGELG-- 450 (648)
Q Consensus 377 ~~~~~~s~-~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~~~--rG~g~~g-- 450 (648)
+.+.+.+. .+.++++.++.|++. . .++.|+|+++||..+....+.+......+++ .|+.|++||. ||.+..|
T Consensus 14 ~~~~~~s~~~~~~~~~~v~~P~~~-~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~ 91 (275)
T TIGR02821 14 GFYRHKSETCGVPMTFGVFLPPQA-A-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGED 91 (275)
T ss_pred EEEEEeccccCCceEEEEEcCCCc-c-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCc
Confidence 44444443 456788888888764 2 3468999999997665544433333445554 5999999998 6665333
Q ss_pred --------hhhhhccc-ccC--CCCcHhHHHHHHHHHHHc-CCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCC
Q 006375 451 --------RQWYENGK-FLK--KKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 518 (648)
Q Consensus 451 --------~~~~~~~~-~~~--~~~~~~D~~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~ 518 (648)
..|+.... ..+ .......+...+..+++. ..+|+++++++|+||||++++.++.++|++|+++++.+|
T Consensus 92 ~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~ 171 (275)
T TIGR02821 92 DAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAP 171 (275)
T ss_pred ccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECC
Confidence 12221100 000 111223334444444443 447889999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCCccccc-ccCCCCCHHHHHHHHcCCccccCCCC-CCCeEEEeecCCCCccCC-chHHHHHHHHHh
Q 006375 519 FVDVLTTMLDPTIPLTTAEWE-EWGDPWKEEFYFYMKSYSPVDNVKAQ-NYPHILVTAGLNDPRVMY-SEPAKFVAKLRE 595 (648)
Q Consensus 519 ~~d~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~sp~~~~~~~-~~P~~li~~g~~D~~v~~-~~~~~~~~~l~~ 595 (648)
+.+.... +....... .++.+. +. +..++|...+.+. ..||+|+.||+.|++||. .++..+.++|++
T Consensus 172 ~~~~~~~------~~~~~~~~~~l~~~~--~~---~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~ 240 (275)
T TIGR02821 172 IVAPSRC------PWGQKAFSAYLGADE--AA---WRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRA 240 (275)
T ss_pred ccCcccC------cchHHHHHHHhcccc--cc---hhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHH
Confidence 9875321 11111111 123321 11 1234555444332 345699999999999999 689999999999
Q ss_pred cCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHhc
Q 006375 596 MKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 637 (648)
Q Consensus 596 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 637 (648)
++++.++.+++ +.+|....-. ..+...+.|+.+++
T Consensus 241 ~g~~v~~~~~~---g~~H~f~~~~----~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 241 AGQALTLRRQA---GYDHSYYFIA----SFIADHLRHHAERL 275 (275)
T ss_pred cCCCeEEEEeC---CCCccchhHH----HhHHHHHHHHHhhC
Confidence 99887766665 8899653221 12334567776654
No 19
>PRK10162 acetyl esterase; Provisional
Probab=99.79 E-value=1e-17 Score=170.37 Aligned_cols=234 Identities=15% Similarity=0.105 Sum_probs=156.4
Q ss_pred ceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCC-CCCchhHHHHHH-CCCEEEEEccCCCCCCChh
Q 006375 375 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQ 452 (648)
Q Consensus 375 ~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~-~~~~~~~~~l~~-~G~~v~~~~~rG~g~~g~~ 452 (648)
..+.+.+++.+| .|++.+++|+.. ..|+||++|||...... ..+......|+. .|+.|+.+|||.+.+.
T Consensus 56 ~~~~~~i~~~~g-~i~~~~y~P~~~-----~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~--- 126 (318)
T PRK10162 56 ATRAYMVPTPYG-QVETRLYYPQPD-----SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA--- 126 (318)
T ss_pred eEEEEEEecCCC-ceEEEEECCCCC-----CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC---
Confidence 467788888887 499998888532 36999999998654333 234555667776 4999999999987653
Q ss_pred hhhcccccCCCCcHhHHHHHHHHHHHc---CCCCCCeEEEEeeChhHHHHHHHHhhC------CCceeEEEecCCccccc
Q 006375 453 WYENGKFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVDVL 523 (648)
Q Consensus 453 ~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~~~a~v~~~~~~d~~ 523 (648)
.....++|+.++++|+.++ ..+|++||+|+|+|+||.+++.++.+. +..++++|+.+|++|+.
T Consensus 127 --------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~ 198 (318)
T PRK10162 127 --------RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLR 198 (318)
T ss_pred --------CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCC
Confidence 1224679999999999764 347899999999999999998887652 35788999999998853
Q ss_pred cccc----CCCC-CCCcccc----ccc-CCCCCHHHHHHHHcCCccccC--CC--CCCCeEEEeecCCCCccCCchHHHH
Q 006375 524 TTML----DPTI-PLTTAEW----EEW-GDPWKEEFYFYMKSYSPVDNV--KA--QNYPHILVTAGLNDPRVMYSEPAKF 589 (648)
Q Consensus 524 ~~~~----~~~~-~~~~~~~----~~~-g~~~~~~~~~~~~~~sp~~~~--~~--~~~P~~li~~g~~D~~v~~~~~~~~ 589 (648)
.... .... .+....+ ..| +++.+ ..+|+... .. ...||++|++|+.|+.+ .+++.|
T Consensus 199 ~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~--------~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~ 268 (318)
T PRK10162 199 DSVSRRLLGGVWDGLTQQDLQMYEEAYLSNDAD--------RESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLL 268 (318)
T ss_pred CChhHHHhCCCccccCHHHHHHHHHHhCCCccc--------cCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHH
Confidence 2100 0000 0100000 001 11110 11232111 11 25688999999999875 589999
Q ss_pred HHHHHhcCCCCCeEEEEecCCCCccCCC--ch-HHHHHHHHHHHHHHHHhcC
Q 006375 590 VAKLREMKTDDNILLFKCELGAGHFSKS--GR-FERLREAAFTYTFLMRALS 638 (648)
Q Consensus 590 ~~~l~~~~~~~~~~~~~~~~~~gH~~~~--~~-~~~~~~~~~~~~fl~~~l~ 638 (648)
.++|+++|+++++.+++ +..|++.. .. .+..+.+..+.+||.++|+
T Consensus 269 ~~~L~~aGv~v~~~~~~---g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 269 YQTLAAHQQPCEFKLYP---GTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred HHHHHHcCCCEEEEEEC---CCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 99999999998777776 88895531 11 2222334456789998875
No 20
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.79 E-value=7.7e-17 Score=168.80 Aligned_cols=203 Identities=10% Similarity=0.017 Sum_probs=147.1
Q ss_pred eeEEeCCCCCE-EEEEEeCCCCeEEEEEEEECCCCCeeecc-ccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCC
Q 006375 84 GCFQVSPDNKL-VAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 84 ~~~~~SPDG~~-la~~~~~~G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
..+.|||||++ ++|++..++ ..+||++|+++|+....+ .++....+.||||| +++|+... ....+||.+++.+
T Consensus 191 ~~p~wSpDG~~~i~y~s~~~~--~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~--~g~~~Iy~~dl~~ 266 (419)
T PRK04043 191 IFPKWANKEQTAFYYTSYGER--KPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAP--KGQPDIYLYDTNT 266 (419)
T ss_pred EeEEECCCCCcEEEEEEccCC--CCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEcc--CCCcEEEEEECCC
Confidence 47999999996 666665443 469999999999877543 44545568899999 99998764 3357899999987
Q ss_pred CCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEEeccC
Q 006375 161 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSD 240 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~ 240 (648)
+. .+.+... +.....+.|||||++|+|.+++.+..+||++|+++++ .++++.... ....|||||+.|+|+++..
T Consensus 267 g~--~~~LT~~--~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~-~~rlt~~g~-~~~~~SPDG~~Ia~~~~~~ 340 (419)
T PRK04043 267 KT--LTQITNY--PGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGS-VEQVVFHGK-NNSSVSTYKNYIVYSSRET 340 (419)
T ss_pred Cc--EEEcccC--CCccCccEECCCCCEEEEEECCCCCceEEEEECCCCC-eEeCccCCC-cCceECCCCCEEEEEEcCC
Confidence 73 3333322 2233467899999999999988778899999999987 666654311 2347999999999998753
Q ss_pred CC----CCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 241 EL----FNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 241 ~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
.. ..++|+++++++. ..+.++... ......|++++..+++.....+...|++++++
T Consensus 341 ~~~~~~~~~~I~v~d~~~g-~~~~LT~~~-~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~ 400 (419)
T PRK04043 341 NNEFGKNTFNLYLISTNSD-YIRRLTANG-VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLN 400 (419)
T ss_pred CcccCCCCcEEEEEECCCC-CeEECCCCC-CcCCeEECCCCCEEEEEEccCCcEEEEEEecC
Confidence 21 2379999999873 344344432 22235567777788888777777889999988
No 21
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.79 E-value=5.6e-18 Score=157.12 Aligned_cols=210 Identities=21% Similarity=0.264 Sum_probs=153.7
Q ss_pred ceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCC-CchhHHHHHH-CCCEEEEEccCCCCCCChh
Q 006375 375 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-FNSSRLSLLD-RGFIFAIAQIRGGGELGRQ 452 (648)
Q Consensus 375 ~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~-~~~~~~~l~~-~G~~v~~~~~rG~g~~g~~ 452 (648)
..+.+..++..|..+-+..+.|+.. ..++|||.||.-. +.+ .......|.. ..+.++..||+|.|..+..
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~-----~~~~lly~hGNa~---Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ 105 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEA-----AHPTLLYSHGNAA---DLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGK 105 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccc-----cceEEEEcCCccc---chHHHHHHHHHHhhcccceEEEEecccccccCCC
Confidence 3455667777787777775655432 4689999999521 222 1111223333 3899999999998855433
Q ss_pred hhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCC
Q 006375 453 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIP 532 (648)
Q Consensus 453 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~ 532 (648)
....+.++|+.++.+||.+... .+++|+++|.|+|...+..+|.+.| .+|+|+.+|+++.++.+... .
T Consensus 106 -------psE~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~--~ 173 (258)
T KOG1552|consen 106 -------PSERNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPD--T 173 (258)
T ss_pred -------cccccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccC--c
Confidence 2233889999999999999876 7899999999999999999999988 89999999999988766421 1
Q ss_pred CCcccccccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCC
Q 006375 533 LTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAG 612 (648)
Q Consensus 533 ~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g 612 (648)
.....++ .|.-++.|+.+++| +||+||++|++|+..++.+++++.+.. .++++.+ ++|
T Consensus 174 ~~~~~~d---------------~f~~i~kI~~i~~P-VLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~---g~g 231 (258)
T KOG1552|consen 174 KTTYCFD---------------AFPNIEKISKITCP-VLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVK---GAG 231 (258)
T ss_pred ceEEeec---------------cccccCcceeccCC-EEEEecccCceecccccHHHHHhcccc---CCCcEEe---cCC
Confidence 1111111 22336778888998 999999999999999999999998753 5677887 899
Q ss_pred ccCCCchHHHHHHH
Q 006375 613 HFSKSGRFERLREA 626 (648)
Q Consensus 613 H~~~~~~~~~~~~~ 626 (648)
|....-.++.++.+
T Consensus 232 H~~~~~~~~yi~~l 245 (258)
T KOG1552|consen 232 HNDIELYPEYIEHL 245 (258)
T ss_pred CcccccCHHHHHHH
Confidence 97665555555543
No 22
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.78 E-value=8.7e-17 Score=169.67 Aligned_cols=207 Identities=12% Similarity=0.026 Sum_probs=138.6
Q ss_pred eeEEeCCCCCE--EEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEE--E
Q 006375 84 GCFQVSPDNKL--VAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH--K 157 (648)
Q Consensus 84 ~~~~~SPDG~~--la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~--~ 157 (648)
..|+|||||+. ++|++..+| ..+||++++++|+.... ..++....++||||| +|+|+..... ..++|.+ +
T Consensus 188 ~sP~wSPDG~~~~~~y~S~~~g--~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g--~~di~~~~~~ 263 (428)
T PRK01029 188 ITPTWMHIGSGFPYLYVSYKLG--VPKIFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYG--NPDLFIQSFS 263 (428)
T ss_pred ccceEccCCCceEEEEEEccCC--CceEEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCCC--CcceeEEEee
Confidence 47899999988 556877776 58999999999986643 345555569999999 9999875322 3346664 4
Q ss_pred CCCCC-CCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeEeeecccc-eeeeEeecCCEEE
Q 006375 158 LEADQ-SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVG-VDTAASHRGNHFF 234 (648)
Q Consensus 158 l~~~~-~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~-~~~~~s~dg~~l~ 234 (648)
+.++. .+...+... .......+.|||||++|++.+...+..+||+++++... ..+.++..... ....|||||++|+
T Consensus 264 ~~~g~~g~~~~lt~~-~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~La 342 (428)
T PRK01029 264 LETGAIGKPRRLLNE-AFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIA 342 (428)
T ss_pred cccCCCCcceEeecC-CCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEE
Confidence 44321 122334322 12223357899999999998876667899999986422 25556543322 3467999999999
Q ss_pred EEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 235 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
|.+... ...+|+++|+++. ..+.+........-..|+++++.+++....++...+++++++
T Consensus 343 f~~~~~--g~~~I~v~dl~~g-~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~ 403 (428)
T PRK01029 343 FCSVIK--GVRQICVYDLATG-RDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLI 403 (428)
T ss_pred EEEcCC--CCcEEEEEECCCC-CeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence 998763 3578999999873 333344332222223344455677777766677789998887
No 23
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.78 E-value=1e-17 Score=173.59 Aligned_cols=251 Identities=16% Similarity=0.132 Sum_probs=154.9
Q ss_pred cceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhh
Q 006375 374 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 453 (648)
Q Consensus 374 ~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~ 453 (648)
+..++.+..+.+|.+|.+....|++. .+.|+||++||..+. ....|...+..|+++||.|+++|+||+|......
T Consensus 59 ~~~~~~~~~~~~g~~l~~~~~~p~~~----~~~~~iv~lHG~~~~-~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~ 133 (349)
T PLN02385 59 IKTEESYEVNSRGVEIFSKSWLPENS----RPKAAVCFCHGYGDT-CTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH 133 (349)
T ss_pred cceeeeeEEcCCCCEEEEEEEecCCC----CCCeEEEEECCCCCc-cchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC
Confidence 44455556678999998887666542 346899999995433 2222345567788889999999999998653210
Q ss_pred hhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCC----
Q 006375 454 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP---- 529 (648)
Q Consensus 454 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~---- 529 (648)
+....-...++|+.+.++++..+...+..++.++|+||||.+++.++.++|++++++|+.+|...+.......
T Consensus 134 ---~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~ 210 (349)
T PLN02385 134 ---GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVL 210 (349)
T ss_pred ---CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHH
Confidence 0000111234666666666655433445689999999999999999999999999999998865421110000
Q ss_pred --------CCCCC----cccccc--cCCC-----------------CCHHHHHHHHcC-CccccCCCCCCCeEEEeecCC
Q 006375 530 --------TIPLT----TAEWEE--WGDP-----------------WKEEFYFYMKSY-SPVDNVKAQNYPHILVTAGLN 577 (648)
Q Consensus 530 --------~~~~~----~~~~~~--~g~~-----------------~~~~~~~~~~~~-sp~~~~~~~~~P~~li~~g~~ 577 (648)
..|.. ...+.. +.++ .-....+.+... .....+.++++| +||+||++
T Consensus 211 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P-~Lii~G~~ 289 (349)
T PLN02385 211 QILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLP-LLILHGEA 289 (349)
T ss_pred HHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCC-EEEEEeCC
Confidence 00000 000000 0000 000111111111 112345667898 99999999
Q ss_pred CCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHH-HH-HHHHHHHHHHHhcC
Q 006375 578 DPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER-LR-EAAFTYTFLMRALS 638 (648)
Q Consensus 578 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~-~~-~~~~~~~fl~~~l~ 638 (648)
|..||+..+.++++++... ..++++++ ++||....+..+. .+ ...++.+||.+++.
T Consensus 290 D~vv~~~~~~~l~~~~~~~--~~~l~~i~---~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 290 DKVTDPSVSKFLYEKASSS--DKKLKLYE---DAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CCccChHHHHHHHHHcCCC--CceEEEeC---CCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 9999999999998877532 34556665 8899765444332 22 34467899998864
No 24
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.78 E-value=1.7e-16 Score=169.29 Aligned_cols=203 Identities=15% Similarity=0.119 Sum_probs=144.3
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
+..++|||||++|||....+| ..+||++|+++|+.... ..++....+.||||| .|+|+... ....+||.+++.+
T Consensus 204 v~~p~wSpDG~~lay~s~~~g--~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~--~g~~~Iy~~d~~~ 279 (435)
T PRK05137 204 VLTPRFSPNRQEITYMSYANG--RPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQ--GGNTDIYTMDLRS 279 (435)
T ss_pred eEeeEECCCCCEEEEEEecCC--CCEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEEEec--CCCceEEEEECCC
Confidence 567999999999999987666 47999999999986543 234445569999999 89887653 3356799999987
Q ss_pred CCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc-eeeeEeecCCEEEEEecc
Q 006375 161 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRS 239 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~~~ 239 (648)
+. ...+.. . ......+.|||||++|++.+++.+..+||++|+++++ .+.++..... ....|||||++|+|.+..
T Consensus 280 ~~--~~~Lt~-~-~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~-~~~lt~~~~~~~~~~~SpdG~~ia~~~~~ 354 (435)
T PRK05137 280 GT--TTRLTD-S-PAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSN-PRRISFGGGRYSTPVWSPRGDLIAFTKQG 354 (435)
T ss_pred Cc--eEEccC-C-CCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCC-eEEeecCCCcccCeEECCCCCEEEEEEcC
Confidence 63 233322 1 2233457899999999998877777899999999887 7777653222 235699999999998864
Q ss_pred CCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCe---eEEEEEEcC
Q 006375 240 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGL---QKITTYRLP 298 (648)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~l~v~~~~ 298 (648)
. ..++|+++++++ +..+ ++.......-..|+++++.+++.....+. ..|++++++
T Consensus 355 ~--~~~~i~~~d~~~-~~~~-~lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~ 412 (435)
T PRK05137 355 G--GQFSIGVMKPDG-SGER-ILTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLT 412 (435)
T ss_pred C--CceEEEEEECCC-CceE-eccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECC
Confidence 2 357899999865 3333 33333322233455556677776665554 578888887
No 25
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.78 E-value=1.6e-16 Score=169.47 Aligned_cols=248 Identities=13% Similarity=0.058 Sum_probs=172.0
Q ss_pred CCCCCeEeCCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEEecccccCCCCcEEEeeEEeCCCC
Q 006375 13 DVSAPFRQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDN 92 (648)
Q Consensus 13 ~~s~p~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~~~~~~~~~SPDG 92 (648)
..+.|...+..++|....+++....++.....+ ...+.|++++.. +..+.|||||
T Consensus 147 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g-----------------~~~~~l~~~~~~--------~~~p~~Spdg 201 (417)
T TIGR02800 147 LTGERGAFSTRIAYVSKSGKSRRYELQVADYDG-----------------ANPQTITRSREP--------ILSPAWSPDG 201 (417)
T ss_pred hcCCCCCcCCEEEEEEEeCCCCcceEEEEcCCC-----------------CCCEEeecCCCc--------eecccCCCCC
Confidence 345666677877777766555566666655432 245677775532 3467899999
Q ss_pred CEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEe
Q 006375 93 KLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYH 170 (648)
Q Consensus 93 ~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 170 (648)
++|||+....+ ..+|+++|+++|+.... ...+....++|+||| .|+|+... ....+||.++++++.. ..+..
T Consensus 202 ~~la~~~~~~~--~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~--~~~~~i~~~d~~~~~~--~~l~~ 275 (417)
T TIGR02800 202 QKLAYVSFESG--KPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSLSK--DGNPDIYVMDLDGKQL--TRLTN 275 (417)
T ss_pred CEEEEEEcCCC--CcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEECC--CCCccEEEEECCCCCE--EECCC
Confidence 99999987655 47899999999875532 344444559999999 89887643 2346799999988732 22222
Q ss_pred ecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-ceeeeEeecCCEEEEEeccCCCCCcEEEE
Q 006375 171 EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSELLA 249 (648)
Q Consensus 171 ~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 249 (648)
. ......+.|+|||++|++.+...+..+||++|+++++ .+.++.... .....|+|||+.|++.... .+.++|+.
T Consensus 276 ~--~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~-~~~l~~~~~~~~~~~~spdg~~i~~~~~~--~~~~~i~~ 350 (417)
T TIGR02800 276 G--PGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE-VRRLTFRGGYNASPSWSPDGDLIAFVHRE--GGGFNIAV 350 (417)
T ss_pred C--CCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC-EEEeecCCCCccCeEECCCCCEEEEEEcc--CCceEEEE
Confidence 1 1222356899999999998877667799999999887 666664322 2345699999999988775 35689999
Q ss_pred EeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 250 CPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
+++.+ +..+ +++......-..++++++.+++...+++...+++++.+
T Consensus 351 ~d~~~-~~~~-~l~~~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~ 397 (417)
T TIGR02800 351 MDLDG-GGER-VLTDTGLDESPSFAPNGRMILYATTRGGRGVLGLVSTD 397 (417)
T ss_pred EeCCC-CCeE-EccCCCCCCCceECCCCCEEEEEEeCCCcEEEEEEECC
Confidence 99876 3333 34433222233566677789888888888888888766
No 26
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.78 E-value=2e-18 Score=154.84 Aligned_cols=211 Identities=19% Similarity=0.184 Sum_probs=150.0
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCC
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 485 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 485 (648)
+-+||++||-.|+..+ .......|.++||.|.+|+++|+|-.+..+-+.+...| ++|+.++.++|.+.++ +
T Consensus 15 ~~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~~gy---~ 85 (243)
T COG1647 15 NRAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKEAGY---D 85 (243)
T ss_pred CEEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHHcCC---C
Confidence 3799999996665443 45556788889999999999999998888877766666 5899999999999998 7
Q ss_pred eEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccccc-CCCCCCCcccccccCCCCCHHHHHHHHcCC--c----
Q 006375 486 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML-DPTIPLTTAEWEEWGDPWKEEFYFYMKSYS--P---- 558 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~s--p---- 558 (648)
.|++.|.||||.+++.++.++| .+++|..++.+.+.+... -+.+-....++..+-.+..+...+.+.+|. |
T Consensus 86 eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~ 163 (243)
T COG1647 86 EIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTT 163 (243)
T ss_pred eEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHH
Confidence 9999999999999999999998 677777766555332110 000000011223333333333334455555 2
Q ss_pred ----------cccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHH
Q 006375 559 ----------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAF 628 (648)
Q Consensus 559 ----------~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 628 (648)
..++..|..| +||++|.+|+.||...+..++..+... ++++.+|. ++||....+. ++-....+
T Consensus 164 ~~~~~~i~~~~~~~~~I~~p-t~vvq~~~D~mv~~~sA~~Iy~~v~s~--~KeL~~~e---~SgHVIt~D~-Erd~v~e~ 236 (243)
T COG1647 164 AQLKKLIKDARRSLDKIYSP-TLVVQGRQDEMVPAESANFIYDHVESD--DKELKWLE---GSGHVITLDK-ERDQVEED 236 (243)
T ss_pred HHHHHHHHHHHhhhhhcccc-hhheecccCCCCCHHHHHHHHHhccCC--cceeEEEc---cCCceeecch-hHHHHHHH
Confidence 2456677888 999999999999999999999998754 45677776 8899654332 22222336
Q ss_pred HHHHHH
Q 006375 629 TYTFLM 634 (648)
Q Consensus 629 ~~~fl~ 634 (648)
++.||.
T Consensus 237 V~~FL~ 242 (243)
T COG1647 237 VITFLE 242 (243)
T ss_pred HHHHhh
Confidence 788885
No 27
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.77 E-value=6.2e-18 Score=161.96 Aligned_cols=192 Identities=11% Similarity=0.121 Sum_probs=126.2
Q ss_pred EEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHH-HCCCEEEEEccCCCCCCChh--hhhcccccCCCCcHhH
Q 006375 392 CIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLL-DRGFIFAIAQIRGGGELGRQ--WYENGKFLKKKNTFTD 468 (648)
Q Consensus 392 ~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~-~~G~~v~~~~~rG~g~~g~~--~~~~~~~~~~~~~~~D 468 (648)
+++.|++. +++.|+||++||+.+..........+..++ +.||+|++||+||++..+.. |..............|
T Consensus 2 ~ly~P~~~---~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T TIGR01840 2 YVYVPAGL---TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVES 78 (212)
T ss_pred EEEcCCCC---CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHH
Confidence 55667664 467899999999765543221111133344 46999999999998755443 3322211222346788
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHH
Q 006375 469 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEE 548 (648)
Q Consensus 469 ~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~ 548 (648)
+...++++.++..+|++||+|+|+|+||.+++.++.++|++|+++++.++..-.... ... ........+....
T Consensus 79 ~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~----~~~---~~~~~~~~~~~~~ 151 (212)
T TIGR01840 79 LHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEAS----SSI---SATPQMCTAATAA 151 (212)
T ss_pred HHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccc----cch---hhHhhcCCCCCHH
Confidence 999999999888899999999999999999999999999999999888875321110 000 0011111122222
Q ss_pred HHH-HHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhc
Q 006375 549 FYF-YMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 596 (648)
Q Consensus 549 ~~~-~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~ 596 (648)
.+. .+.... .. .....|+++|+||++|.+||+..+++++++|++.
T Consensus 152 ~~~~~~~~~~--~~-~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 152 SVCRLVRGMQ--SE-YNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHHHhccC--Cc-ccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 221 122111 11 1224666899999999999999999999999876
No 28
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.76 E-value=7.9e-16 Score=163.14 Aligned_cols=207 Identities=11% Similarity=0.028 Sum_probs=146.5
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
.+..++|||||++|||+....| ..+|+++++++|+.... ..++....+.||||| .|+|+... ....+||.+++.
T Consensus 200 ~~~~p~wSPDG~~la~~s~~~g--~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~--~g~~~I~~~d~~ 275 (429)
T PRK03629 200 PLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSK--TGSLNLYVMDLA 275 (429)
T ss_pred ceeeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcC--CCCcEEEEEECC
Confidence 3468999999999999987555 57899999999986543 344445569999999 89987653 233569999998
Q ss_pred CCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc-eeeeEeecCCEEEEEec
Q 006375 160 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRR 238 (648)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~~ 238 (648)
++. ...+... ......+.|||||++|++.+++.+..+||++|+++++ .+.++..... ....|||||++|+|.+.
T Consensus 276 tg~--~~~lt~~--~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~-~~~lt~~~~~~~~~~~SpDG~~Ia~~~~ 350 (429)
T PRK03629 276 SGQ--IRQVTDG--RSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA-PQRITWEGSQNQDADVSSDGKFMVMVSS 350 (429)
T ss_pred CCC--EEEccCC--CCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC-eEEeecCCCCccCEEECCCCCEEEEEEc
Confidence 762 2333222 2233468999999999998877667899999999887 6666543222 23569999999999887
Q ss_pred cCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCc
Q 006375 239 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEP 303 (648)
Q Consensus 239 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~ 303 (648)
.. ....|+.+|+++. ..+.+. ......-..+++++..+++...+.+...+++++++ |..
T Consensus 351 ~~--g~~~I~~~dl~~g-~~~~Lt-~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~--G~~ 409 (429)
T PRK03629 351 NG--GQQHIAKQDLATG-GVQVLT-DTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTD--GRF 409 (429)
T ss_pred cC--CCceEEEEECCCC-CeEEeC-CCCCCCCceECCCCCEEEEEEcCCCceEEEEEECC--CCC
Confidence 53 3468999998763 333233 22222234566666678777777677788988887 553
No 29
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.76 E-value=7.9e-16 Score=161.20 Aligned_cols=240 Identities=10% Similarity=0.048 Sum_probs=166.4
Q ss_pred CEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEecCC-e-EEEEEeCCCCCCceEEEEECCCCCCCcEEEEe
Q 006375 93 KLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-A-LVYITMDEILRPDKAWLHKLEADQSNDICLYH 170 (648)
Q Consensus 93 ~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg-~-l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 170 (648)
.++||.+...|....+|+++|.++......+..+....+.||||| + ++|++... +..+||++++.++ +.+.+..
T Consensus 155 ~r~~~v~~~~~~~~~~l~~~d~dg~~~~~~~~~~~~~~p~wSpDG~~~i~y~s~~~--~~~~Iyv~dl~tg--~~~~lt~ 230 (419)
T PRK04043 155 KRKVVFSKYTGPKKSNIVLADYTLTYQKVIVKGGLNIFPKWANKEQTAFYYTSYGE--RKPTLYKYNLYTG--KKEKIAS 230 (419)
T ss_pred eeEEEEEEccCCCcceEEEECCCCCceeEEccCCCeEeEEECCCCCcEEEEEEccC--CCCEEEEEECCCC--cEEEEec
Confidence 567777765454468999999998766544333455579999999 6 66666532 3458999999887 3444443
Q ss_pred ecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-ceeeeEeecCCEEEEEeccCCCCCcEEEE
Q 006375 171 EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSELLA 249 (648)
Q Consensus 171 ~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 249 (648)
. +.....+.|||||++|++.....+..+||++|+++++ .++++.... .....|+|||++|+|++++. ...+||+
T Consensus 231 ~--~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~-~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~--g~~~Iy~ 305 (419)
T PRK04043 231 S--QGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT-LTQITNYPGIDVNGNFVEDDKRIVFVSDRL--GYPNIFM 305 (419)
T ss_pred C--CCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc-EEEcccCCCccCccEECCCCCEEEEEECCC--CCceEEE
Confidence 2 2334457899999999998877777899999999987 788876543 34567999999999999874 3468999
Q ss_pred EeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecC------CeeEEEEEEcCCCCCcccccCCCceeecCCCeeeee
Q 006375 250 CPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREG------GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSID 323 (648)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~ 323 (648)
+|++++...+ ++.... . ...++++++.+++..... +..+|++++++ ++..+.|+... ...
T Consensus 306 ~dl~~g~~~r-lt~~g~-~-~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~--~g~~~~LT~~~---------~~~ 371 (419)
T PRK04043 306 KKLNSGSVEQ-VVFHGK-N-NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTN--SDYIRRLTANG---------VNQ 371 (419)
T ss_pred EECCCCCeEe-CccCCC-c-CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECC--CCCeEECCCCC---------CcC
Confidence 9998743333 443322 2 246788888888877654 33588988887 44444444321 111
Q ss_pred CCCCcccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 324 PSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 324 ~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
...+++|+..+.|.... ..-..++.+++..+.
T Consensus 372 ~p~~SPDG~~I~f~~~~-~~~~~L~~~~l~g~~ 403 (419)
T PRK04043 372 FPRFSSDGGSIMFIKYL-GNQSALGIIRLNYNK 403 (419)
T ss_pred CeEECCCCCEEEEEEcc-CCcEEEEEEecCCCe
Confidence 24567889988877554 444568999987665
No 30
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.76 E-value=7.5e-17 Score=155.18 Aligned_cols=216 Identities=18% Similarity=0.197 Sum_probs=158.4
Q ss_pred EEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChh----
Q 006375 377 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ---- 452 (648)
Q Consensus 377 ~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~---- 452 (648)
+.+.+++.+ .++++++.+|+.. ++.|+||++|+-+|... ........|+.+||+|++||+-+..+....
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~----~~~P~VIv~hei~Gl~~--~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~ 75 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGA----GGFPGVIVLHEIFGLNP--HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDE 75 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcC----CCCCEEEEEecccCCch--HHHHHHHHHHhCCcEEEechhhccCCCCCccccc
Confidence 456677777 7799999999875 34499999999887654 355667899999999999998552222111
Q ss_pred --hhhcc--cccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccC
Q 006375 453 --WYENG--KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD 528 (648)
Q Consensus 453 --~~~~~--~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~ 528 (648)
....+ ..........|+.++++||..+..++++||+++|+|+||.+++.++.+.| .++|+|+..|..-..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~----- 149 (236)
T COG0412 76 PAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD----- 149 (236)
T ss_pred HHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC-----
Confidence 11111 01111457899999999999998899999999999999999999999877 699999998742100
Q ss_pred CCCCCCcccccccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEec
Q 006375 529 PTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCE 608 (648)
Q Consensus 529 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 608 (648)
. .....++++| +|+.+|+.|..+|.....++.+++.++++..++.+|.
T Consensus 150 --------------~---------------~~~~~~~~~p-vl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~-- 197 (236)
T COG0412 150 --------------D---------------TADAPKIKVP-VLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYP-- 197 (236)
T ss_pred --------------c---------------ccccccccCc-EEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeC--
Confidence 0 0014466788 9999999999999999999999999987777666666
Q ss_pred CCCCccCCCc---------hHHHHHHHHHHHHHHHHhcC
Q 006375 609 LGAGHFSKSG---------RFERLREAAFTYTFLMRALS 638 (648)
Q Consensus 609 ~~~gH~~~~~---------~~~~~~~~~~~~~fl~~~l~ 638 (648)
++.|.+... ....-....++++||.++|+
T Consensus 198 -ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 198 -GAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred -CCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 677854321 11112223357899998886
No 31
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.75 E-value=4.6e-18 Score=163.82 Aligned_cols=205 Identities=19% Similarity=0.198 Sum_probs=134.6
Q ss_pred EeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCC-CChhhhhc--ccc----cC
Q 006375 389 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE-LGRQWYEN--GKF----LK 461 (648)
Q Consensus 389 i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~-~g~~~~~~--~~~----~~ 461 (648)
+.+++..|++. ++.|.||++|+.+|.. +.....+..|+++||.|++||+-++.+ ......+. ... ..
T Consensus 1 ~~ay~~~P~~~----~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~ 74 (218)
T PF01738_consen 1 IDAYVARPEGG----GPRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPR 74 (218)
T ss_dssp EEEEEEEETTS----SSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHS
T ss_pred CeEEEEeCCCC----CCCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhh
Confidence 46777887653 6789999999988765 223344678899999999999865544 11111100 000 01
Q ss_pred CCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCccccccc
Q 006375 462 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW 541 (648)
Q Consensus 462 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~ 541 (648)
......|+.+++++|.++..++.+||+++|+|+||.+++.++.+. +.++|+|+..|...
T Consensus 75 ~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~-------------------- 133 (218)
T PF01738_consen 75 PEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP-------------------- 133 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS--------------------
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC--------------------
Confidence 124568889999999999878899999999999999999999876 57999999988100
Q ss_pred CCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchH-
Q 006375 542 GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRF- 620 (648)
Q Consensus 542 g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~- 620 (648)
...+.....++++| +|+++|++|+.++..+..++.++|++++.+.++.+|+ +++|++.....
T Consensus 134 -------------~~~~~~~~~~~~~P-~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~---ga~HgF~~~~~~ 196 (218)
T PF01738_consen 134 -------------PPPPLEDAPKIKAP-VLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYP---GAGHGFANPSRP 196 (218)
T ss_dssp -------------GGGHHHHGGG--S--EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEET---T--TTTTSTTST
T ss_pred -------------CCcchhhhcccCCC-EeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECC---CCcccccCCCCc
Confidence 00112223455677 9999999999999999999999999999887777775 88996643221
Q ss_pred -----HHHHHHHHHHHHHHHhc
Q 006375 621 -----ERLREAAFTYTFLMRAL 637 (648)
Q Consensus 621 -----~~~~~~~~~~~fl~~~l 637 (648)
...+......+||.++|
T Consensus 197 ~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 197 PYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp T--HHHHHHHHHHHHHHHCC--
T ss_pred ccCHHHHHHHHHHHHHHHHhcC
Confidence 11222335688888776
No 32
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.75 E-value=1e-15 Score=162.40 Aligned_cols=203 Identities=13% Similarity=0.073 Sum_probs=145.7
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc-ccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
+..++|||||++|||+...++ ..+||++|+++|+..... .++....++||||| .|+|+... ....+||.+++.+
T Consensus 198 v~~p~wSPDG~~la~~s~~~~--~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~--~g~~~Iy~~d~~~ 273 (427)
T PRK02889 198 IISPAWSPDGTKLAYVSFESK--KPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSR--DGNSQIYTVNADG 273 (427)
T ss_pred cccceEcCCCCEEEEEEccCC--CcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEcc--CCCceEEEEECCC
Confidence 457899999999999987654 578999999999865432 44445569999999 99887653 2356799999876
Q ss_pred CCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecc-cceeeeEeecCCEEEEEecc
Q 006375 161 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFITRRS 239 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~~~~ 239 (648)
+. ...+. .. ......+.|||||++|++.++..+..+||.++++++. .+.++... ......|||||++|+|.++.
T Consensus 274 ~~--~~~lt-~~-~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~ 348 (427)
T PRK02889 274 SG--LRRLT-QS-SGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA-AQRVTFTGSYNTSPRISPDGKLLAYISRV 348 (427)
T ss_pred CC--cEECC-CC-CCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc-eEEEecCCCCcCceEECCCCCEEEEEEcc
Confidence 62 23332 22 2233457899999999998877677899999998876 66665322 12345699999999999875
Q ss_pred CCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 240 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
. ..++|+++++++. ..+.+.... ...-..|++++..+++.....+...+++++++
T Consensus 349 ~--g~~~I~v~d~~~g-~~~~lt~~~-~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~ 403 (427)
T PRK02889 349 G--GAFKLYVQDLATG-QVTALTDTT-RDESPSFAPNGRYILYATQQGGRSVLAAVSSD 403 (427)
T ss_pred C--CcEEEEEEECCCC-CeEEccCCC-CccCceECCCCCEEEEEEecCCCEEEEEEECC
Confidence 3 3468999999763 344344332 22234566666788888888888889988886
No 33
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.75 E-value=1.5e-16 Score=177.47 Aligned_cols=260 Identities=17% Similarity=0.204 Sum_probs=170.8
Q ss_pred CCCCCCcceEEEEEeCC-----CCe--EEeEEEEEeeCccccCCCCcEEEEe----cCCCCCC-------C------C--
Q 006375 368 GFDTNNYFTERKWASAS-----DGT--QIPICIVYRKNLVKLDGSDPLLLYG----YGSYEIC-------N------D-- 421 (648)
Q Consensus 368 ~~~~~~~~~~~~~~~s~-----~g~--~i~~~l~~~~~~~~~~~~~P~vl~~----hGg~~~~-------~------~-- 421 (648)
-|+...+..|.+++.+. ||. .|.+.++.|+.. ..+-|.|+|+-. .|.-... . .
T Consensus 162 ~~~~~~~ire~v~Vet~~Dtd~dg~~D~v~~~i~rP~~~-~~g~k~p~i~~aspY~~g~~~~~~~~~~~~~~~~l~~~~~ 240 (767)
T PRK05371 162 VFDTSQLIREVVYVETPVDTDQDGKLDLVKVTIVRPKET-ASGLKVPVIMTASPYYQGTNDVANDKKLHNVDVELYAKPP 240 (767)
T ss_pred ccCcccceEEEEEEeCCCCCCCCCCcceEEEEEECCCcc-CCCCccceEEecCccccCCCCcccccccccCCccccccCC
Confidence 35666666777777663 443 578888888765 333367877742 2320000 0 0
Q ss_pred --------------------CCC-----chhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHH
Q 006375 422 --------------------PAF-----NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYL 476 (648)
Q Consensus 422 --------------------~~~-----~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l 476 (648)
..| ......|+.+||+|++.|.||.++++..|.. ......+|..++|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-----~~~~E~~D~~~vIeWl 315 (767)
T PRK05371 241 RAQFTPLKTQPRKLPVGPAEESFTHINSYSLNDYFLPRGFAVVYVSGIGTRGSDGCPTT-----GDYQEIESMKAVIDWL 315 (767)
T ss_pred ccccccccccccccCCCccchhhccCcchhHHHHHHhCCeEEEEEcCCCCCCCCCcCcc-----CCHHHHHHHHHHHHHH
Confidence 000 0223688999999999999999887666542 2235679999999999
Q ss_pred HHc--CCCC------------CCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccc----
Q 006375 477 IKN--CYCT------------KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW---- 538 (648)
Q Consensus 477 ~~~--~~~d------------~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~---- 538 (648)
..+ .++| .++|+++|.||||+++.++|+..|+.++|+|+.+++.|+...+.....+.....|
T Consensus 316 ~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged 395 (767)
T PRK05371 316 NGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGED 395 (767)
T ss_pred hhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcc
Confidence 854 2233 5899999999999999999988888999999999998865433211111000000
Q ss_pred ----cc--------cCC-----C---------------CCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchH
Q 006375 539 ----EE--------WGD-----P---------------WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEP 586 (648)
Q Consensus 539 ----~~--------~g~-----~---------------~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~ 586 (648)
.+ .|. + ..+..-+++...++..++.++++| +|++||.+|..|++.++
T Consensus 396 ~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvP-vLlIhGw~D~~V~~~~s 474 (767)
T PRK05371 396 LDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKAS-VLVVHGLNDWNVKPKQV 474 (767)
T ss_pred hhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCC-EEEEeeCCCCCCChHHH
Confidence 00 000 0 000111234556777888889998 99999999999999999
Q ss_pred HHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHhcCC
Q 006375 587 AKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 639 (648)
Q Consensus 587 ~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 639 (648)
.+++++|++++.+.++++. ..+|...... ...+-...+++||.++|..
T Consensus 475 ~~ly~aL~~~g~pkkL~l~----~g~H~~~~~~-~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 475 YQWWDALPENGVPKKLFLH----QGGHVYPNNW-QSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred HHHHHHHHhcCCCeEEEEe----CCCccCCCch-hHHHHHHHHHHHHHhcccc
Confidence 9999999998888776544 4578543221 1122233568999999864
No 34
>PHA02857 monoglyceride lipase; Provisional
Probab=99.74 E-value=1e-16 Score=160.81 Aligned_cols=236 Identities=16% Similarity=0.135 Sum_probs=149.2
Q ss_pred eCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccC
Q 006375 382 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK 461 (648)
Q Consensus 382 ~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 461 (648)
.+.||.++++.+..|.+ .+.|+|+++||.... ...|...+..|+++||.|+++|+||+|....... ....
T Consensus 6 ~~~~g~~l~~~~~~~~~-----~~~~~v~llHG~~~~--~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~---~~~~ 75 (276)
T PHA02857 6 FNLDNDYIYCKYWKPIT-----YPKALVFISHGAGEH--SGRYEELAENISSLGILVFSHDHIGHGRSNGEKM---MIDD 75 (276)
T ss_pred ecCCCCEEEEEeccCCC-----CCCEEEEEeCCCccc--cchHHHHHHHHHhCCCEEEEccCCCCCCCCCccC---CcCC
Confidence 35699999998665532 345899999996433 3346677788888999999999999986532100 0011
Q ss_pred CCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccc-------------ccC
Q 006375 462 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT-------------MLD 528 (648)
Q Consensus 462 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~-------------~~~ 528 (648)
-...++|+...++++.... ...++.++|+|+||.++..++.++|++++++|+.+|..+.... ...
T Consensus 76 ~~~~~~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~ 153 (276)
T PHA02857 76 FGVYVRDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYP 153 (276)
T ss_pred HHHHHHHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCC
Confidence 1123577777777776542 2367999999999999999999999999999999997653110 000
Q ss_pred CCCC--CCcc----cc---ccc-CCCC------CHHHHHHHHcCC--ccccCCCCCCCeEEEeecCCCCccCCchHHHHH
Q 006375 529 PTIP--LTTA----EW---EEW-GDPW------KEEFYFYMKSYS--PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFV 590 (648)
Q Consensus 529 ~~~~--~~~~----~~---~~~-g~~~------~~~~~~~~~~~s--p~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~ 590 (648)
.... +... .. ..+ .+|. .......+.... ....+.++++| +|+++|++|..||+..+.++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vliv~G~~D~i~~~~~~~~l~ 232 (276)
T PHA02857 154 NKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTP-ILILQGTNNEISDVSGAYYFM 232 (276)
T ss_pred CCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCC-EEEEecCCCCcCChHHHHHHH
Confidence 0000 0000 00 000 1110 000000011111 12346677898 999999999999999999988
Q ss_pred HHHHhcCCCCCeEEEEecCCCCccCCCchHH-HHHHHHHHHHHHHHh
Q 006375 591 AKLREMKTDDNILLFKCELGAGHFSKSGRFE-RLREAAFTYTFLMRA 636 (648)
Q Consensus 591 ~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~~fl~~~ 636 (648)
+.+.. ..++.+++ ++||.....+.+ +-+...++++||.++
T Consensus 233 ~~~~~---~~~~~~~~---~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 233 QHANC---NREIKIYE---GAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHccC---CceEEEeC---CCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 87643 34556665 899977655443 233355778999886
No 35
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.74 E-value=2e-15 Score=161.27 Aligned_cols=203 Identities=14% Similarity=0.159 Sum_probs=147.0
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc-ccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
+..++|||||++|||+...++ ..+||++|+++|+..... ..+....+.||||| .|+|+...+ ...+||.+++.+
T Consensus 201 ~~~p~wSpDG~~la~~s~~~~--~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~--g~~~Iy~~d~~~ 276 (430)
T PRK00178 201 ILSPRWSPDGKRIAYVSFEQK--RPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKD--GNPEIYVMDLAS 276 (430)
T ss_pred eeeeeECCCCCEEEEEEcCCC--CCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccC--CCceEEEEECCC
Confidence 467899999999999987655 578999999999865432 34444569999999 998876532 346799999988
Q ss_pred CCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-ceeeeEeecCCEEEEEecc
Q 006375 161 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRS 239 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~~~~ 239 (648)
+. ...+.. . ......+.|||||++|++.++..+..+||++++.+++ .+.++.... .....|||||++|+|.+..
T Consensus 277 ~~--~~~lt~-~-~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~-~~~lt~~~~~~~~~~~Spdg~~i~~~~~~ 351 (430)
T PRK00178 277 RQ--LSRVTN-H-PAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGR-AERVTFVGNYNARPRLSADGKTLVMVHRQ 351 (430)
T ss_pred CC--eEEccc-C-CCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCC-EEEeecCCCCccceEECCCCCEEEEEEcc
Confidence 73 233322 1 2233457899999999998877777899999999887 666653221 2234699999999999875
Q ss_pred CCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 240 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
+ ..++|+++|+++ +..+.+.....+ .-..+++++..+++...+++...+++++++
T Consensus 352 ~--~~~~l~~~dl~t-g~~~~lt~~~~~-~~p~~spdg~~i~~~~~~~g~~~l~~~~~~ 406 (430)
T PRK00178 352 D--GNFHVAAQDLQR-GSVRILTDTSLD-ESPSVAPNGTMLIYATRQQGRGVLMLVSIN 406 (430)
T ss_pred C--CceEEEEEECCC-CCEEEccCCCCC-CCceECCCCCEEEEEEecCCceEEEEEECC
Confidence 3 357899999987 334434332222 234566677788888887888889999887
No 36
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.73 E-value=2.3e-16 Score=149.27 Aligned_cols=247 Identities=15% Similarity=0.106 Sum_probs=163.4
Q ss_pred eEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhh
Q 006375 376 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 455 (648)
Q Consensus 376 ~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 455 (648)
...-.+++.+|.++-...-.|... ..+.-+|+++|| ++......|...+..|+..||.|+.+|++|+|....-
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~---~~pr~lv~~~HG-~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl--- 99 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSG---TEPRGLVFLCHG-YGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL--- 99 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCC---CCCceEEEEEcC-CcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCC---
Confidence 445567788898887765555442 245678999999 4555556788888899999999999999999864210
Q ss_pred cccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccccc--------
Q 006375 456 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML-------- 527 (648)
Q Consensus 456 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~-------- 527 (648)
.+.-..-...++|+..-.+.+..+.--......++|+||||.+++.++.++|+.+.++|+.+|.+-+...+-
T Consensus 100 ~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~ 179 (313)
T KOG1455|consen 100 HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISI 179 (313)
T ss_pred cccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHH
Confidence 011112224567777777776666444456899999999999999999999999999999999765433220
Q ss_pred ----CCCCCCCc-ccccccCCC--CCHHHHHHHHcCCc----------------------cccCCCCCCCeEEEeecCCC
Q 006375 528 ----DPTIPLTT-AEWEEWGDP--WKEEFYFYMKSYSP----------------------VDNVKAQNYPHILVTAGLND 578 (648)
Q Consensus 528 ----~~~~~~~~-~~~~~~g~~--~~~~~~~~~~~~sp----------------------~~~~~~~~~P~~li~~g~~D 578 (648)
..-+|.+. ..-..-.++ .+++..+. ...+| ..|+.++..| +||+||+.|
T Consensus 180 l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~-~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvP-flilHG~dD 257 (313)
T KOG1455|consen 180 LTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKI-LRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVP-FLILHGTDD 257 (313)
T ss_pred HHHHHHhCCceeecCCccccccccCCHHHHHH-hhcCCceecCCccHHHHHHHHHHHHHHHHhccccccc-EEEEecCCC
Confidence 00011100 000000111 12322211 12233 3567778998 999999999
Q ss_pred CccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCC--chHHHHHHHHHHHHHHHHh
Q 006375 579 PRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS--GRFERLREAAFTYTFLMRA 636 (648)
Q Consensus 579 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~ 636 (648)
.++.+.-+.++++....+ ++.+.+|+ |.-|.... ...+......++.+||.++
T Consensus 258 ~VTDp~~Sk~Lye~A~S~--DKTlKlYp---Gm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 258 KVTDPKVSKELYEKASSS--DKTLKLYP---GMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cccCcHHHHHHHHhccCC--CCceeccc---cHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999999999987654 44455665 88885543 3344344466899999876
No 37
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.73 E-value=2e-15 Score=159.41 Aligned_cols=252 Identities=13% Similarity=0.115 Sum_probs=166.0
Q ss_pred eEEeCCCCCEEEEEEeCCCCe----EEEEEEEECCCCCeeecccc-CccceeEEecCC-e--EEEEEeCCCCCCceEEEE
Q 006375 85 CFQVSPDNKLVAYAEDTKGDE----IYTVYVIDIETGTPVGKPLV-GVTASVEWAGNE-A--LVYITMDEILRPDKAWLH 156 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e----~~~l~v~dl~~g~~~~~~~~-~~~~~~~WspDg-~--l~y~~~~~~~~~~~l~~~ 156 (648)
.+.++ +++|||+....+.+ ..+||++|.+++..++.+.. .....+.||||| + ++|++... ...+||++
T Consensus 141 ~~g~~--~~~iayv~~~~~~~~~~~~~~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~--g~~~I~~~ 216 (428)
T PRK01029 141 VPGIS--SGKIIFSLSTTNSDTELKQGELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKL--GVPKIFLG 216 (428)
T ss_pred CCccc--cCEEEEEEeeCCcccccccceEEEEcCCCCCceEcccCCCCcccceEccCCCceEEEEEEccC--CCceEEEE
Confidence 34455 99999998764422 46999999999887765432 334569999999 6 66677643 34689999
Q ss_pred ECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEE--ECCCCC--ceeEeeecccc--eeeeEeecC
Q 006375 157 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYL--DVSKPE--ELRVLTPRVVG--VDTAASHRG 230 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~--dl~~~~--~~~~l~~~~~~--~~~~~s~dg 230 (648)
++.++. ...+... +.....+.|||||++|++.++..+..++|+. +++++. ..+.++....+ ..+.|||||
T Consensus 217 ~l~~g~--~~~lt~~--~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG 292 (428)
T PRK01029 217 SLENPA--GKKILAL--QGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDG 292 (428)
T ss_pred ECCCCC--ceEeecC--CCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCC
Confidence 999874 3333322 2233457999999999998876666778875 555421 25666644322 346799999
Q ss_pred CEEEEEeccCCCCCcEEEEEeCCCC-CcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCC
Q 006375 231 NHFFITRRSDELFNSELLACPVDNT-SETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQG 309 (648)
Q Consensus 231 ~~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~ 309 (648)
++|+|.+++++ ..+|++++++.. +..+.+...........++++++.+++....++..+|++++++ ++..+.++.
T Consensus 293 ~~Laf~s~~~g--~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~--~g~~~~Lt~ 368 (428)
T PRK01029 293 TRLVFVSNKDG--RPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLA--TGRDYQLTT 368 (428)
T ss_pred CEEEEEECCCC--CceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECC--CCCeEEccC
Confidence 99999998643 458999887532 2223233332222344566777888888777777889999987 443333332
Q ss_pred CceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCcE
Q 006375 310 GKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 357 (648)
Q Consensus 310 ~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 357 (648)
. ...+....+++|+..++|.... .....+|.+++.+++.
T Consensus 369 ~--------~~~~~~p~wSpDG~~L~f~~~~-~g~~~L~~vdl~~g~~ 407 (428)
T PRK01029 369 S--------PENKESPSWAIDSLHLVYSAGN-SNESELYLISLITKKT 407 (428)
T ss_pred C--------CCCccceEECCCCCEEEEEECC-CCCceEEEEECCCCCE
Confidence 1 1122234566788888776554 3446899999988873
No 38
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.73 E-value=2.7e-15 Score=160.00 Aligned_cols=246 Identities=13% Similarity=0.146 Sum_probs=169.1
Q ss_pred CCCEEEEEEeCCCCe--EEEEEEEECCCCCeeeccc-cCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcE
Q 006375 91 DNKLVAYAEDTKGDE--IYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDI 166 (648)
Q Consensus 91 DG~~la~~~~~~G~e--~~~l~v~dl~~g~~~~~~~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~ 166 (648)
-..+|||..+..|.. ..+||++|.+++.....+. ......++||||| +|+|++... ...+||++++.++. ..
T Consensus 164 f~~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~--g~~~i~~~dl~~g~--~~ 239 (435)
T PRK05137 164 FDTRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYAN--GRPRVYLLDLETGQ--RE 239 (435)
T ss_pred CCCeEEEEEeeCCCCCcceEEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecC--CCCEEEEEECCCCc--EE
Confidence 356899998766533 6799999998877654332 2345569999999 999988643 34679999998873 23
Q ss_pred EEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-ceeeeEeecCCEEEEEeccCCCCCc
Q 006375 167 CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNS 245 (648)
Q Consensus 167 ~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~ 245 (648)
.+... +.....+.|||||+.|++.....+..+||++|++++. .+.++.... .....|+|||++|+|.+++.+ ..
T Consensus 240 ~l~~~--~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g--~~ 314 (435)
T PRK05137 240 LVGNF--PGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT-TTRLTDSPAIDTSPSYSPDGSQIVFESDRSG--SP 314 (435)
T ss_pred EeecC--CCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCc-eEEccCCCCccCceeEcCCCCEEEEEECCCC--CC
Confidence 33222 2233467899999999988776677899999999987 777765432 234679999999999987633 46
Q ss_pred EEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCC
Q 006375 246 ELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPS 325 (648)
Q Consensus 246 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~ 325 (648)
+|+++++++ +..+.+...........++++++.+++.....+..++++++++ ++....++.. ..+...
T Consensus 315 ~Iy~~d~~g-~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~--~~~~~~lt~~---------~~~~~p 382 (435)
T PRK05137 315 QLYVMNADG-SNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPD--GSGERILTSG---------FLVEGP 382 (435)
T ss_pred eEEEEECCC-CCeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECC--CCceEeccCC---------CCCCCC
Confidence 899999876 3333344333222234466677788877766666788988876 3322222211 123345
Q ss_pred CCcccccEEEEEEeeCCCC--CEEEEEECCCCcE
Q 006375 326 ESVFSSRILRFHYSSLRTP--PSVYDYDMDMGIS 357 (648)
Q Consensus 326 ~~~~~~~~l~~~~ss~~~P--~~~~~~d~~~~~~ 357 (648)
.+++|++.++|........ ..+|.+++.+++.
T Consensus 383 ~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~ 416 (435)
T PRK05137 383 TWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE 416 (435)
T ss_pred eECCCCCEEEEEEccCCCCCcceEEEEECCCCce
Confidence 6778899888877665553 5899999987763
No 39
>PRK10749 lysophospholipase L2; Provisional
Probab=99.73 E-value=3.7e-16 Score=160.44 Aligned_cols=246 Identities=18% Similarity=0.209 Sum_probs=146.0
Q ss_pred EEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhc
Q 006375 377 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 456 (648)
Q Consensus 377 ~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~ 456 (648)
+...+...+|.++......+. .+.|+||++||..+.. ..|...+..|+++||.|+++|+||+|..+......
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~------~~~~~vll~HG~~~~~--~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~ 102 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAP------HHDRVVVICPGRIESY--VKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDP 102 (330)
T ss_pred cceEEEcCCCCEEEEEEccCC------CCCcEEEEECCccchH--HHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCC
Confidence 556666788888777643332 2347899999953322 13445556788899999999999999765432110
Q ss_pred ccc--cCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccc--------
Q 006375 457 GKF--LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM-------- 526 (648)
Q Consensus 457 ~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~-------- 526 (648)
... ..-....+|+.+.++.+... .+..++.++|+||||.++..++.++|+.++++|+.+|........
T Consensus 103 ~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~ 180 (330)
T PRK10749 103 HRGHVERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRI 180 (330)
T ss_pred CcCccccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHH
Confidence 000 01112234555555544432 234789999999999999999999999999999999865321000
Q ss_pred ---c--CCCC----CCCcccccccC---C--CCCHHHH----HHHHcC---------------------CccccCCCCCC
Q 006375 527 ---L--DPTI----PLTTAEWEEWG---D--PWKEEFY----FYMKSY---------------------SPVDNVKAQNY 567 (648)
Q Consensus 527 ---~--~~~~----~~~~~~~~~~g---~--~~~~~~~----~~~~~~---------------------sp~~~~~~~~~ 567 (648)
. .... ......|.... + ..+++.+ +.+... ....++.+++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 260 (330)
T PRK10749 181 LNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITT 260 (330)
T ss_pred HHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCC
Confidence 0 0000 00000000000 0 0011110 000000 11234566788
Q ss_pred CeEEEeecCCCCccCCchHHHHHHHHHhcCC---CCCeEEEEecCCCCccCCCchHH-HHHHHHHHHHHHHHh
Q 006375 568 PHILVTAGLNDPRVMYSEPAKFVAKLREMKT---DDNILLFKCELGAGHFSKSGRFE-RLREAAFTYTFLMRA 636 (648)
Q Consensus 568 P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~~fl~~~ 636 (648)
| +||+||++|..|++..+.+++++++.++. ..++++++ ++||....+... +-....++.+||.++
T Consensus 261 P-~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~---gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 261 P-LLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIK---GAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred C-EEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeC---CCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 8 99999999999999999999999987653 33566665 899965433322 222344678888764
No 40
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.72 E-value=4.8e-15 Score=157.85 Aligned_cols=203 Identities=15% Similarity=0.111 Sum_probs=145.3
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
+..++|||||++|||+....+ ..+|+++|+++|+.... ..++....+.||||| .|+|+...+ ...+||++++.+
T Consensus 206 v~~p~wSpDg~~la~~s~~~~--~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~--g~~~Iy~~d~~~ 281 (433)
T PRK04922 206 ILSPAWSPDGKKLAYVSFERG--RSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRD--GNPEIYVMDLGS 281 (433)
T ss_pred cccccCCCCCCEEEEEecCCC--CcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCC--CCceEEEEECCC
Confidence 457899999999999987655 57899999999886543 234455569999999 898876532 346799999988
Q ss_pred CCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecc-cceeeeEeecCCEEEEEecc
Q 006375 161 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFITRRS 239 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~~~~ 239 (648)
+. ...+.. . ......+.|||||++|++.++..+..+||++++++++ .+.++... ......|||||++|+|.+..
T Consensus 282 g~--~~~lt~-~-~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~ 356 (433)
T PRK04922 282 RQ--LTRLTN-H-FGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGS-AERLTFQGNYNARASVSPDGKKIAMVHGS 356 (433)
T ss_pred CC--eEECcc-C-CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC-eEEeecCCCCccCEEECCCCCEEEEEECC
Confidence 73 233322 1 2233467899999999998877777899999998887 66665322 22345799999999998764
Q ss_pred CCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 240 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
...++|+++++.+ +..+.+. +.....-..++++++.+++.....+...|++++++
T Consensus 357 --~~~~~I~v~d~~~-g~~~~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~ 411 (433)
T PRK04922 357 --GGQYRIAVMDLST-GSVRTLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTD 411 (433)
T ss_pred --CCceeEEEEECCC-CCeEECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECC
Confidence 2457899999876 3333233 33222223556666778877777777889998886
No 41
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.70 E-value=2.6e-16 Score=160.45 Aligned_cols=229 Identities=20% Similarity=0.209 Sum_probs=151.6
Q ss_pred CCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCc-hhH-HHHHHCCCEEEEEccCCCCCCChhhhhccccc
Q 006375 383 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN-SSR-LSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 460 (648)
Q Consensus 383 s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~-~~~-~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~ 460 (648)
...+..+++.++.| .. ....+.|+|||+|||.......... ... ..+...|+.|+++|||-..+.
T Consensus 58 ~~~~~~~~~~~y~p-~~-~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~----------- 124 (312)
T COG0657 58 GPSGDGVPVRVYRP-DR-KAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH----------- 124 (312)
T ss_pred CCCCCceeEEEECC-CC-CCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-----------
Confidence 44555688888887 32 3345689999999987665554433 333 455567999999999987764
Q ss_pred CCCCcHhHHHHHHHHHHHcC---CCCCCeEEEEeeChhHHHHHHHHhhCCC----ceeEEEecCCcccccccccCCCCC-
Q 006375 461 KKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVLTTMLDPTIP- 532 (648)
Q Consensus 461 ~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p~----~~~a~v~~~~~~d~~~~~~~~~~~- 532 (648)
.-...++|+.+++.|+.++. .+|+++|+++|+|+||.|++.++.+..+ ..++.++.+|.+|... . .....
T Consensus 125 ~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~-~~~~~~ 202 (312)
T COG0657 125 PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-S-AASLPG 202 (312)
T ss_pred CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-c-ccchhh
Confidence 22356899999999999874 4899999999999999999888776433 5789999999999764 1 11110
Q ss_pred ------CCcccc-----ccc-CCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCC
Q 006375 533 ------LTTAEW-----EEW-GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 600 (648)
Q Consensus 533 ------~~~~~~-----~~~-g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~ 600 (648)
+..... ..| +...+... ...+|+..-.-...||+||++|+.|...+ +++.|.++|+++|++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~spl~~~~~~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~ 276 (312)
T COG0657 203 YGEADLLDAAAILAWFADLYLGAAPDRED----PEASPLASDDLSGLPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPV 276 (312)
T ss_pred cCCccccCHHHHHHHHHHHhCcCccccCC----CccCccccccccCCCCEEEEecCCCcchh--HHHHHHHHHHHcCCeE
Confidence 000000 000 11000000 12345543321137889999999999877 9999999999999998
Q ss_pred CeEEEEecCCCCccCCCc-hHHHHHHHHHHHHHHHH
Q 006375 601 NILLFKCELGAGHFSKSG-RFERLREAAFTYTFLMR 635 (648)
Q Consensus 601 ~~~~~~~~~~~gH~~~~~-~~~~~~~~~~~~~fl~~ 635 (648)
++..++ +..|.+... .....+.+..+..|+..
T Consensus 277 ~~~~~~---g~~H~f~~~~~~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 277 ELRVYP---GMIHGFDLLTGPEARSALRQIAAFLRA 309 (312)
T ss_pred EEEEeC---CcceeccccCcHHHHHHHHHHHHHHHH
Confidence 776665 778855221 12223333445566653
No 42
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.68 E-value=4.8e-15 Score=154.08 Aligned_cols=244 Identities=15% Similarity=0.074 Sum_probs=150.6
Q ss_pred eEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhh
Q 006375 376 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 455 (648)
Q Consensus 376 ~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 455 (648)
.....+...++..+.+....|+.. .+.|+||++||..+.. ..|...+..|+++||.|+++|+||+|.....+.
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~~----~~~~~Vl~lHG~~~~~--~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~- 182 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAAG----EMRGILIIIHGLNEHS--GRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG- 182 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCCC----CCceEEEEECCchHHH--HHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-
Confidence 455556677888888886666432 3468999999965432 225556678888999999999999986543211
Q ss_pred cccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCC---ceeEEEecCCcccccccc------
Q 006375 456 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVDVLTTM------ 526 (648)
Q Consensus 456 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~~~a~v~~~~~~d~~~~~------ 526 (648)
.........+|+.++++++.... +..++.++|+||||.+++.++. +|+ .++++|+.+|.+++....
T Consensus 183 --~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~ 257 (395)
T PLN02652 183 --YVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAV 257 (395)
T ss_pred --CCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHH
Confidence 00111123578888888887542 2347999999999999987765 564 789999999986543210
Q ss_pred ------cCCCCCCCcc------------c-ccccCCCCC-------HHHHHHHHcCC-ccccCCCCCCCeEEEeecCCCC
Q 006375 527 ------LDPTIPLTTA------------E-WEEWGDPWK-------EEFYFYMKSYS-PVDNVKAQNYPHILVTAGLNDP 579 (648)
Q Consensus 527 ------~~~~~~~~~~------------~-~~~~g~~~~-------~~~~~~~~~~s-p~~~~~~~~~P~~li~~g~~D~ 579 (648)
..+...+... . ...+.+|.. ...+..+.... ...++.++++| +||+||++|.
T Consensus 258 ~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vP-vLIi~G~~D~ 336 (395)
T PLN02652 258 APIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVP-FMVLHGTADR 336 (395)
T ss_pred HHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCC-EEEEEeCCCC
Confidence 0000000000 0 000111100 00000000000 12355677898 9999999999
Q ss_pred ccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCc-hHHHHHHHHHHHHHHHHhcCC
Q 006375 580 RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG-RFERLREAAFTYTFLMRALSM 639 (648)
Q Consensus 580 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~~~~~~fl~~~l~~ 639 (648)
.||+..+.++++++... ..++.+++ +++|..... ..+. ...++.+||..+++.
T Consensus 337 vvp~~~a~~l~~~~~~~--~k~l~~~~---ga~H~l~~e~~~e~--v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 337 VTDPLASQDLYNEAASR--HKDIKLYD---GFLHDLLFEPEREE--VGRDIIDWMEKRLDL 390 (395)
T ss_pred CCCHHHHHHHHHhcCCC--CceEEEEC---CCeEEeccCCCHHH--HHHHHHHHHHHHhhc
Confidence 99999999999887543 34455664 889965332 2222 233678999999864
No 43
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=3.8e-14 Score=150.31 Aligned_cols=242 Identities=12% Similarity=0.084 Sum_probs=160.3
Q ss_pred CEEEEEEeCCC-CeEEEEEEEECCCCCeeecc-ccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEE
Q 006375 93 KLVAYAEDTKG-DEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLY 169 (648)
Q Consensus 93 ~~la~~~~~~G-~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 169 (648)
++|||.....+ ....+||++|.+++.....+ .......++||||| .|+|++... ...+||++++.++. ...+.
T Consensus 164 ~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~--g~~~i~i~dl~~G~--~~~l~ 239 (429)
T PRK03629 164 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES--GRSALVIQTLANGA--VRQVA 239 (429)
T ss_pred CeEEEEEeeCCCCcceeEEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecC--CCcEEEEEECCCCC--eEEcc
Confidence 78999977543 33679999999987655432 23345679999999 999987532 24579999998763 33333
Q ss_pred eecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-ceeeeEeecCCEEEEEeccCCCCCcEEE
Q 006375 170 HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSELL 248 (648)
Q Consensus 170 ~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 248 (648)
... .....+.|||||++|++.....+..+||++|+++++ .+.++.... .....|+|||+.|+|.+++.+ ..+||
T Consensus 240 ~~~--~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~-~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g--~~~Iy 314 (429)
T PRK03629 240 SFP--RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAG--RPQVY 314 (429)
T ss_pred CCC--CCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCC-EEEccCCCCCcCceEECCCCCEEEEEeCCCC--CceEE
Confidence 222 222357899999999998766666789999999987 777765432 234679999999999998632 45899
Q ss_pred EEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCCCc
Q 006375 249 ACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESV 328 (648)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~~ 328 (648)
.+++++. ..+.+...........++++++.+++....++...+++++++ ++....|+.. +......++
T Consensus 315 ~~d~~~g-~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~--~g~~~~Lt~~---------~~~~~p~~S 382 (429)
T PRK03629 315 KVNINGG-APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA--TGGVQVLTDT---------FLDETPSIA 382 (429)
T ss_pred EEECCCC-CeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECC--CCCeEEeCCC---------CCCCCceEC
Confidence 9999763 333243332222234456667788877777777788988887 3433333311 111234566
Q ss_pred ccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 329 FSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 329 ~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
+|+..+.|.... .....++.+++..+.
T Consensus 383 pDG~~i~~~s~~-~~~~~l~~~~~~G~~ 409 (429)
T PRK03629 383 PNGTMVIYSSSQ-GMGSVLNLVSTDGRF 409 (429)
T ss_pred CCCCEEEEEEcC-CCceEEEEEECCCCC
Confidence 888877665542 223457888875554
No 44
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.67 E-value=2.6e-16 Score=156.76 Aligned_cols=210 Identities=20% Similarity=0.297 Sum_probs=136.2
Q ss_pred CCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCch---------hHHHHHHCCCEEEEEccCCCCCCChhhhh
Q 006375 385 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS---------SRLSLLDRGFIFAIAQIRGGGELGRQWYE 455 (648)
Q Consensus 385 ~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~---------~~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 455 (648)
||++|.+.++.| +. ...++.|+||..|+ |+......... ....|+++||+|++.|.||.|+++..|..
T Consensus 1 DGv~L~adv~~P-~~-~~~~~~P~il~~tp-Y~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~ 77 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA-DGGGPFPVILTRTP-YGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP 77 (272)
T ss_dssp TS-EEEEEEEEE----TTSSSEEEEEEEES-STCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T
T ss_pred CCCEEEEEEEec-CC-CCCCcccEEEEccC-cCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc
Confidence 789999999999 33 44688999999988 44221100010 11239999999999999999988777753
Q ss_pred cccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCC-CCC-C
Q 006375 456 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP-TIP-L 533 (648)
Q Consensus 456 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~-~~~-~ 533 (648)
. ..+..+|..++|+|+..+.+.| .||+++|.|++|+.+..+|.+.|..++|++..++..|+......+ ... .
T Consensus 78 ~-----~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~ 151 (272)
T PF02129_consen 78 M-----SPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRL 151 (272)
T ss_dssp T-----SHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBC
T ss_pred C-----ChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCcccc
Confidence 2 4456799999999999997754 799999999999999999997888899999999999987622111 110 0
Q ss_pred C-cccc-------cccCC-C-CC----------------------------------HHHHHHHHcCCccccCCCCCCCe
Q 006375 534 T-TAEW-------EEWGD-P-WK----------------------------------EEFYFYMKSYSPVDNVKAQNYPH 569 (648)
Q Consensus 534 ~-~~~~-------~~~g~-~-~~----------------------------------~~~~~~~~~~sp~~~~~~~~~P~ 569 (648)
. ...| ..... + .. +...+++.+.++..++.++++|
T Consensus 152 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP- 230 (272)
T PF02129_consen 152 GFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVP- 230 (272)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SE-
T ss_pred cchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCC-
Confidence 0 0011 00000 0 00 0011233344445557788998
Q ss_pred EEEeecCCCCccCCchHHHHHHHHHhcC-CCCCeEEE
Q 006375 570 ILVTAGLNDPRVMYSEPAKFVAKLREMK-TDDNILLF 605 (648)
Q Consensus 570 ~li~~g~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~ 605 (648)
+|+++|..|.... .++.+.+++|+..+ .+.++++-
T Consensus 231 ~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liig 266 (272)
T PF02129_consen 231 VLIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIG 266 (272)
T ss_dssp EEEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEE
T ss_pred EEEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEe
Confidence 9999999997666 89999999999887 45455444
No 45
>PRK11460 putative hydrolase; Provisional
Probab=99.66 E-value=2.3e-15 Score=145.67 Aligned_cols=186 Identities=17% Similarity=0.167 Sum_probs=126.9
Q ss_pred CCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCC----CCChhhhhcccccCCCC-------cHhHHHHH
Q 006375 404 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGG----ELGRQWYENGKFLKKKN-------TFTDFIAC 472 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g----~~g~~~~~~~~~~~~~~-------~~~D~~~~ 472 (648)
.+.|+||++||..++.. .+......|...++.+.++.++|.. +.|+.|.... .....+ ..+.+.+.
T Consensus 14 ~~~~~vIlLHG~G~~~~--~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~-~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV--AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQ-GITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCcEEEEEeCCCCChH--HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCC-CCCccchHHHHHHHHHHHHHH
Confidence 45689999999554432 3555666777777666666666632 3356776421 111112 22344556
Q ss_pred HHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHHHHHH
Q 006375 473 AEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFY 552 (648)
Q Consensus 473 ~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 552 (648)
++++..+..+++++|+++|+|+||.+++.++.++|+.++++|+.+|.+. .. +.
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~--------~~------------~~------- 143 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA--------SL------------PE------- 143 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------cc------------cc-------
Confidence 6777767668899999999999999999999889988888877665321 00 00
Q ss_pred HHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHH
Q 006375 553 MKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTF 632 (648)
Q Consensus 553 ~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 632 (648)
....+.| +|++||++|++||++.+++++++|++.+.+.++..++ ++||.... + ++.+..+|
T Consensus 144 ---------~~~~~~p-vli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~---~~gH~i~~---~---~~~~~~~~ 204 (232)
T PRK11460 144 ---------TAPTATT-IHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVE---DLGHAIDP---R---LMQFALDR 204 (232)
T ss_pred ---------cccCCCc-EEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEEC---CCCCCCCH---H---HHHHHHHH
Confidence 0012455 9999999999999999999999999988776666554 88997642 2 33355677
Q ss_pred HHHhcC
Q 006375 633 LMRALS 638 (648)
Q Consensus 633 l~~~l~ 638 (648)
|.+.|.
T Consensus 205 l~~~l~ 210 (232)
T PRK11460 205 LRYTVP 210 (232)
T ss_pred HHHHcc
Confidence 777763
No 46
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.66 E-value=3.4e-15 Score=163.49 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=106.7
Q ss_pred EeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCC-CCCC-chhHHHHHHCCCEEEEEccCCCCCCChhhhhccc
Q 006375 381 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN-DPAF-NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK 458 (648)
Q Consensus 381 ~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~-~~~~-~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~ 458 (648)
+++.||.+|.+.++.|++. ++.|+||++||-..... ...+ ......|+++||+|+++|+||.|+.+..+...+
T Consensus 1 i~~~DG~~L~~~~~~P~~~----~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~- 75 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAGG----GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG- 75 (550)
T ss_pred CcCCCCCEEEEEEEecCCC----CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-
Confidence 3578999999998888653 57899999998332211 0111 223467889999999999999998765543211
Q ss_pred ccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccc
Q 006375 459 FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT 525 (648)
Q Consensus 459 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~ 525 (648)
....+|+.++++|+..+.+.+ .+|+++|+|+||.+++.++.++|+.++|+|+.+++.|+...
T Consensus 76 ----~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~~ 137 (550)
T TIGR00976 76 ----SDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYRD 137 (550)
T ss_pred ----cccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhHh
Confidence 457799999999999988776 69999999999999999999889999999999999987754
No 47
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.66 E-value=8.3e-14 Score=147.89 Aligned_cols=239 Identities=14% Similarity=0.124 Sum_probs=159.8
Q ss_pred CEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEe
Q 006375 93 KLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYH 170 (648)
Q Consensus 93 ~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 170 (648)
.+|||....++ ..+||++|.++...... ........++||||| .|+|+... ....+||++++.++. ...+..
T Consensus 164 ~~iayv~~~~~--~~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~--~~~~~I~~~dl~~g~--~~~l~~ 237 (427)
T PRK02889 164 TRIAYVIKTGN--RYQLQISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFE--SKKPVVYVHDLATGR--RRVVAN 237 (427)
T ss_pred cEEEEEEccCC--ccEEEEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEcc--CCCcEEEEEECCCCC--EEEeec
Confidence 57999986544 57899999977654433 223345569999999 99998763 334579999998873 233322
Q ss_pred ecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-ceeeeEeecCCEEEEEeccCCCCCcEEEE
Q 006375 171 EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSELLA 249 (648)
Q Consensus 171 ~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 249 (648)
. +.....+.|||||++|++..+..+..+||++|++++. .+.++.... .....|+|||++|+|.+++. ...+||.
T Consensus 238 ~--~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~--g~~~Iy~ 312 (427)
T PRK02889 238 F--KGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRG--GAPQIYR 312 (427)
T ss_pred C--CCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCC--CCcEEEE
Confidence 1 2233467899999999998777777899999998876 677765432 23467999999999998863 3458999
Q ss_pred EeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCCCcc
Q 006375 250 CPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVF 329 (648)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~~~ 329 (648)
+++++. ..+.++.......-..++++++++++....++...+++++++. +....++.. . ......+++
T Consensus 313 ~~~~~g-~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~--g~~~~lt~~--------~-~~~~p~~sp 380 (427)
T PRK02889 313 MPASGG-AAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLAT--GQVTALTDT--------T-RDESPSFAP 380 (427)
T ss_pred EECCCC-ceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCC--CCeEEccCC--------C-CccCceECC
Confidence 998763 3332333322222345666777888777666667899998873 333322211 1 112356678
Q ss_pred cccEEEEEEeeCCCCCEEEEEECCCC
Q 006375 330 SSRILRFHYSSLRTPPSVYDYDMDMG 355 (648)
Q Consensus 330 ~~~~l~~~~ss~~~P~~~~~~d~~~~ 355 (648)
++..++|....-. -..+|.++....
T Consensus 381 dg~~l~~~~~~~g-~~~l~~~~~~g~ 405 (427)
T PRK02889 381 NGRYILYATQQGG-RSVLAAVSSDGR 405 (427)
T ss_pred CCCEEEEEEecCC-CEEEEEEECCCC
Confidence 8888887765443 356888887543
No 48
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=3.5e-14 Score=151.18 Aligned_cols=159 Identities=16% Similarity=0.215 Sum_probs=118.9
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecccc-CccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCC
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV-GVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQ 162 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~-~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~ 162 (648)
.+.|||||++|||+.+.+| ..+||++|+++++....+.. .....++|+||| +|+|+.... ...+||.+++.++.
T Consensus 266 ~~~wSPDG~~La~~~~~~g--~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~--g~~~Iy~~dl~~g~ 341 (448)
T PRK04792 266 APRFSPDGKKLALVLSKDG--QPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERG--GKPQIYRVNLASGK 341 (448)
T ss_pred CeeECCCCCEEEEEEeCCC--CeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCC--CCceEEEEECCCCC
Confidence 6899999999999988776 57999999999987654332 334569999999 898886532 34679999998773
Q ss_pred CCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEEeccCCC
Q 006375 163 SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDEL 242 (648)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~ 242 (648)
...+..+ ..+...+.|||||++|++.+...+..+||++|+++++ .+.++.........|+|||+.|+|.++.+
T Consensus 342 --~~~Lt~~--g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~-~~~lt~~~~d~~ps~spdG~~I~~~~~~~-- 414 (448)
T PRK04792 342 --VSRLTFE--GEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGA-MQVLTSTRLDESPSVAPNGTMVIYSTTYQ-- 414 (448)
T ss_pred --EEEEecC--CCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCC-eEEccCCCCCCCceECCCCCEEEEEEecC--
Confidence 2333211 2223357899999999998766666789999999987 77776543334457999999999998863
Q ss_pred CCcEEEEEeCCC
Q 006375 243 FNSELLACPVDN 254 (648)
Q Consensus 243 ~~~~l~~~~~~~ 254 (648)
....|+.++.++
T Consensus 415 g~~~l~~~~~~G 426 (448)
T PRK04792 415 GKQVLAAVSIDG 426 (448)
T ss_pred CceEEEEEECCC
Confidence 345789888865
No 49
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=9.8e-14 Score=147.55 Aligned_cols=198 Identities=12% Similarity=0.074 Sum_probs=134.4
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
.+..+.|||||++|||+...++ ..+|+++|+++|+.... ...+....++||||| .|+|+...+ ...+||.+++.
T Consensus 205 ~v~~p~wSPDG~~la~~s~~~~--~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~--g~~~Iy~~d~~ 280 (429)
T PRK01742 205 PLMSPAWSPDGSKLAYVSFENK--KSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKD--GVLNIYVMGAN 280 (429)
T ss_pred ccccceEcCCCCEEEEEEecCC--CcEEEEEeCCCCceEEEecCCCccCceeECCCCCEEEEEEecC--CcEEEEEEECC
Confidence 3457999999999999986544 57899999999875432 344444569999999 898876432 23569999987
Q ss_pred CCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEEecc
Q 006375 160 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRS 239 (648)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~ 239 (648)
++. ...+.. . ......+.|||||++|++.++..+..+||.+++.++. .+.+... +....|+|||++|++.+.
T Consensus 281 ~~~--~~~lt~-~-~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~-~~~l~~~--~~~~~~SpDG~~ia~~~~- 352 (429)
T PRK01742 281 GGT--PSQLTS-G-AGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGG-ASLVGGR--GYSAQISADGKTLVMING- 352 (429)
T ss_pred CCC--eEeecc-C-CCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCC-eEEecCC--CCCccCCCCCCEEEEEcC-
Confidence 762 233322 2 2234468999999999998877777899999998776 5554322 223459999999988765
Q ss_pred CCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 240 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
..++++|+.+. ..+.+... ....-..+++++..+++...+++...+++++.+
T Consensus 353 -----~~i~~~Dl~~g-~~~~lt~~-~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~ 404 (429)
T PRK01742 353 -----DNVVKQDLTSG-STEVLSST-FLDESPSISPNGIMIIYSSTQGLGKVLQLVSAD 404 (429)
T ss_pred -----CCEEEEECCCC-CeEEecCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEECC
Confidence 24777888763 33323322 222223456666677777666666566777666
No 50
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=8.3e-14 Score=148.42 Aligned_cols=243 Identities=13% Similarity=0.137 Sum_probs=161.5
Q ss_pred CCEEEEEEeCC--CCeEEEEEEEECCCCCeeecc-ccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEE
Q 006375 92 NKLVAYAEDTK--GDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDIC 167 (648)
Q Consensus 92 G~~la~~~~~~--G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~ 167 (648)
+++|||..... +....+|+++|.+++.....+ .......++||||| .|+|++... ...+||++++.++. ...
T Consensus 167 ~~~ia~v~~~~~~~~~~~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~--~~~~l~~~dl~~g~--~~~ 242 (433)
T PRK04922 167 WTRIAYVTVSGAGGAMRYALQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFER--GRSAIYVQDLATGQ--REL 242 (433)
T ss_pred cceEEEEEEeCCCCCceEEEEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCC--CCcEEEEEECCCCC--EEE
Confidence 56788986532 234678999999877655433 23335569999999 999987632 35679999998763 333
Q ss_pred EEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-ceeeeEeecCCEEEEEeccCCCCCcE
Q 006375 168 LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSE 246 (648)
Q Consensus 168 ~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~ 246 (648)
+... +.....+.|||||++|++.....+..+||++|+++++ .+.++.... .....|+|||++|+|.+++.+ ..+
T Consensus 243 l~~~--~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~-~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g--~~~ 317 (433)
T PRK04922 243 VASF--RGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQ-LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGG--RPQ 317 (433)
T ss_pred eccC--CCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCC-eEECccCCCCccceEECCCCCEEEEEECCCC--Cce
Confidence 3222 2233357899999999988766667899999999987 777765432 234679999999999998643 358
Q ss_pred EEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCC
Q 006375 247 LLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE 326 (648)
Q Consensus 247 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~ 326 (648)
||.+++++.. .+.++.......-..++++++.+++....++..+|++++++ ++....++... ......
T Consensus 318 iy~~dl~~g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~--~g~~~~Lt~~~---------~~~~p~ 385 (433)
T PRK04922 318 IYRVAASGGS-AERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLS--TGSVRTLTPGS---------LDESPS 385 (433)
T ss_pred EEEEECCCCC-eEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECC--CCCeEECCCCC---------CCCCce
Confidence 9999987633 33243332222234566677788877666666689999886 34333333211 112245
Q ss_pred CcccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 327 SVFSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 327 ~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
+++++..+.|.... ..-..+|.+++.++.
T Consensus 386 ~spdG~~i~~~s~~-~g~~~L~~~~~~g~~ 414 (433)
T PRK04922 386 FAPNGSMVLYATRE-GGRGVLAAVSTDGRV 414 (433)
T ss_pred ECCCCCEEEEEEec-CCceEEEEEECCCCc
Confidence 67788877776554 334579999986654
No 51
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.65 E-value=1.4e-14 Score=144.27 Aligned_cols=235 Identities=17% Similarity=0.163 Sum_probs=151.6
Q ss_pred eEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCC---CCCCchhHHHHHH-CCCEEEEEccCCCCCCCh
Q 006375 376 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN---DPAFNSSRLSLLD-RGFIFAIAQIRGGGELGR 451 (648)
Q Consensus 376 ~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~---~~~~~~~~~~l~~-~G~~v~~~~~rG~g~~g~ 451 (648)
..++.+. ....++.+++.|... ....+.|+|||+|||...-. ...|......++. .+.+|+.+|||-..|.
T Consensus 63 ~~dv~~~--~~~~l~vRly~P~~~-~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh-- 137 (336)
T KOG1515|consen 63 SKDVTID--PFTNLPVRLYRPTSS-SSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH-- 137 (336)
T ss_pred eeeeEec--CCCCeEEEEEcCCCC-CcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC--
Confidence 3455444 444588898888765 33378999999999854433 3344444555544 4999999999977653
Q ss_pred hhhhcccccCCCCcHhHHHHHHHHHHHc----CCCCCCeEEEEeeChhHHHHHHHHhhC------CCceeEEEecCCccc
Q 006375 452 QWYENGKFLKKKNTFTDFIACAEYLIKN----CYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVD 521 (648)
Q Consensus 452 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~----~~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~~~a~v~~~~~~d 521 (648)
.-...++|..+|+.|+.++ ..+|++||+|+|.|+||.+|..++.+. +-.+++.|+..|++.
T Consensus 138 ---------~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 138 ---------PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred ---------CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 3346789999999999885 568999999999999999998877653 236899999999987
Q ss_pred ccccccCCCCCCCcccccccCCCC-C-HHHHHHHHc-------------CCccc-----cCCCCCCCeEEEeecCCCCcc
Q 006375 522 VLTTMLDPTIPLTTAEWEEWGDPW-K-EEFYFYMKS-------------YSPVD-----NVKAQNYPHILVTAGLNDPRV 581 (648)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~g~~~-~-~~~~~~~~~-------------~sp~~-----~~~~~~~P~~li~~g~~D~~v 581 (648)
....... +. ++...+.+. . +....+++. .+|.. ...-..+|++||+.++.|..
T Consensus 209 ~~~~~~~-e~-----~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L- 281 (336)
T KOG1515|consen 209 GTDRTES-EK-----QQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVL- 281 (336)
T ss_pred CCCCCCH-HH-----HHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhh-
Confidence 5443211 00 000001110 0 011111111 12222 12223788899999999966
Q ss_pred CCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCC--c-hHHHHHHHHHHHHHHHH
Q 006375 582 MYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS--G-RFERLREAAFTYTFLMR 635 (648)
Q Consensus 582 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~--~-~~~~~~~~~~~~~fl~~ 635 (648)
..+...|+++|+++|++.+.+.++ ++.|++.. . .....+......+|+.+
T Consensus 282 -~D~~~~Y~~~Lkk~Gv~v~~~~~e---~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 282 -RDEGLAYAEKLKKAGVEVTLIHYE---DGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred -hhhhHHHHHHHHHcCCeEEEEEEC---CCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 479999999999999998744454 77885421 1 12223333345566654
No 52
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=1.5e-13 Score=146.90 Aligned_cols=253 Identities=9% Similarity=0.098 Sum_probs=165.1
Q ss_pred EEEeeEEeCCCCCEEEEEEeCC--CCeEEEEEEEECCCCCeeecc-ccCccceeEEecCC-eEEEEEeCCCCCCceEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTK--GDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~--G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~ 156 (648)
..+.+.... ..++|||..... +.+.++|+++|.+++...... .......+.||||| +|+|++... ...+||++
T Consensus 152 ~~ltg~~g~-f~~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~--~~~~l~~~ 228 (430)
T PRK00178 152 EKLTGIKGA-FSTRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQ--KRPRIFVQ 228 (430)
T ss_pred HHHhCCCcc-ceeeEEEEEeeCCCCCcceEEEEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCC--CCCEEEEE
Confidence 344444443 566799986532 345789999999987655432 23334569999999 999987642 34579999
Q ss_pred ECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-ceeeeEeecCCEEEE
Q 006375 157 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFI 235 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~ 235 (648)
++.++. ...+.... .....+.|||||++|++.....+..+||++|+++++ .+.++.... ...+.|+|||++|+|
T Consensus 229 ~l~~g~--~~~l~~~~--g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~~spDg~~i~f 303 (430)
T PRK00178 229 NLDTGR--REQITNFE--GLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQ-LSRVTNHPAIDTEPFWGKDGRTLYF 303 (430)
T ss_pred ECCCCC--EEEccCCC--CCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCC-eEEcccCCCCcCCeEECCCCCEEEE
Confidence 998873 23333222 223357899999999998776667899999999987 777765432 234679999999999
Q ss_pred EeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeec
Q 006375 236 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEF 315 (648)
Q Consensus 236 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~ 315 (648)
.+++. ...+||.+++.+.. .+.+...........++++++.+++....++...|+++++++ +..+.++..
T Consensus 304 ~s~~~--g~~~iy~~d~~~g~-~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~t--g~~~~lt~~----- 373 (430)
T PRK00178 304 TSDRG--GKPQIYKVNVNGGR-AERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQR--GSVRILTDT----- 373 (430)
T ss_pred EECCC--CCceEEEEECCCCC-EEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCC--CCEEEccCC-----
Confidence 98863 34689999987633 332332222222345666778888877766666788888873 333333321
Q ss_pred CCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 316 IDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 316 ~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
... ....+++++..+.|..... .-..+|.++...+.
T Consensus 374 ---~~~-~~p~~spdg~~i~~~~~~~-g~~~l~~~~~~g~~ 409 (430)
T PRK00178 374 ---SLD-ESPSVAPNGTMLIYATRQQ-GRGVLMLVSINGRV 409 (430)
T ss_pred ---CCC-CCceECCCCCEEEEEEecC-CceEEEEEECCCCc
Confidence 111 1235567888777665432 22468888876544
No 53
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.62 E-value=1.9e-14 Score=143.80 Aligned_cols=243 Identities=18% Similarity=0.197 Sum_probs=148.5
Q ss_pred EEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhc
Q 006375 377 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 456 (648)
Q Consensus 377 ~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~ 456 (648)
.+..+.+.||.++......+... +..+||++||...... .|...+..|..+||.|+..|.||+|...+ .+.
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~-----~~g~Vvl~HG~~Eh~~--ry~~la~~l~~~G~~V~~~D~RGhG~S~r--~~r 80 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEP-----PKGVVVLVHGLGEHSG--RYEELADDLAARGFDVYALDLRGHGRSPR--GQR 80 (298)
T ss_pred ccceeecCCCceEEEEeecCCCC-----CCcEEEEecCchHHHH--HHHHHHHHHHhCCCEEEEecCCCCCCCCC--CCc
Confidence 44566778998887764443322 2379999999654432 35556788999999999999999998753 111
Q ss_pred ccccCCCCcHhHHHHHHHHHHHcCC--CCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccc--cc------
Q 006375 457 GKFLKKKNTFTDFIACAEYLIKNCY--CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--TM------ 526 (648)
Q Consensus 457 ~~~~~~~~~~~D~~~~~~~l~~~~~--~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~--~~------ 526 (648)
|. ...++|+.+.++.+++.-. .-..++.++||||||.+++.++.+++..++++|+.+|++.+.. ..
T Consensus 81 g~----~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~ 156 (298)
T COG2267 81 GH----VDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARL 156 (298)
T ss_pred CC----chhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHH
Confidence 11 1225555555555544321 1247999999999999999999999999999999999988762 00
Q ss_pred -------cCCCCCCCcc-c-ccccCCC-CCHHHHHHH--------------------HcCC-c-cccCCCCCCCeEEEee
Q 006375 527 -------LDPTIPLTTA-E-WEEWGDP-WKEEFYFYM--------------------KSYS-P-VDNVKAQNYPHILVTA 574 (648)
Q Consensus 527 -------~~~~~~~~~~-~-~~~~g~~-~~~~~~~~~--------------------~~~s-p-~~~~~~~~~P~~li~~ 574 (648)
..+.++.... . ....... .+++.-+.+ .... + .....+++.| +||++
T Consensus 157 ~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~P-vLll~ 235 (298)
T COG2267 157 ALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALP-VLLLQ 235 (298)
T ss_pred hcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCC-EEEEe
Confidence 0011111110 0 0000000 122211111 1111 1 1223445888 99999
Q ss_pred cCCCCccC-CchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCc-hHHHHHHHHHHHHHHHHhcC
Q 006375 575 GLNDPRVM-YSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG-RFERLREAAFTYTFLMRALS 638 (648)
Q Consensus 575 g~~D~~v~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~~~~~~fl~~~l~ 638 (648)
|++|..|+ .....++++++.... .++++++ ++.|....+ ...+-+...++.+||.+++.
T Consensus 236 g~~D~vv~~~~~~~~~~~~~~~~~--~~~~~~~---g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 236 GGDDRVVDNVEGLARFFERAGSPD--KELKVIP---GAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred cCCCccccCcHHHHHHHHhcCCCC--ceEEecC---CcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 99999999 577777776665433 3556665 889954322 22123344567899988764
No 54
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.62 E-value=6.8e-15 Score=130.88 Aligned_cols=234 Identities=17% Similarity=0.140 Sum_probs=159.6
Q ss_pred CcceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhH-HHHHHCCCEEEEEccCCCCCCCh
Q 006375 373 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSR-LSLLDRGFIFAIAQIRGGGELGR 451 (648)
Q Consensus 373 ~~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~-~~l~~~G~~v~~~~~rG~g~~g~ 451 (648)
++.-+++...+.|..++.++++..+ ...|++|++|+..|.... +...+ ..+.+.+..|++++|||=|..-.
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~E------~S~pTlLyfh~NAGNmGh--r~~i~~~fy~~l~mnv~ivsYRGYG~S~G 122 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLSE------SSRPTLLYFHANAGNMGH--RLPIARVFYVNLKMNVLIVSYRGYGKSEG 122 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeeccc------CCCceEEEEccCCCcccc--hhhHHHHHHHHcCceEEEEEeeccccCCC
Confidence 4456899999999999999988722 258999999996654332 22333 35566799999999997553322
Q ss_pred hhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCC
Q 006375 452 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTI 531 (648)
Q Consensus 452 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~ 531 (648)
.-.+. .-.-|-.++++||..+...|..+|.+.|.|.||..|..++....+++.|+|+..-|+.+-..+..--.
T Consensus 123 spsE~-------GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~ 195 (300)
T KOG4391|consen 123 SPSEE-------GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVF 195 (300)
T ss_pred Ccccc-------ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheec
Confidence 22222 23368999999999999999999999999999999999999988999999999877765332211011
Q ss_pred CCCcccccccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCC
Q 006375 532 PLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 611 (648)
Q Consensus 532 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 611 (648)
|+.......+ .++ ..++.+..+..-+.| .|++.|..|..|||-+-+++++...... +++..|+ ++
T Consensus 196 p~~~k~i~~l-------c~k--n~~~S~~ki~~~~~P-~LFiSGlkDelVPP~~Mr~Ly~~c~S~~--Krl~eFP---~g 260 (300)
T KOG4391|consen 196 PFPMKYIPLL-------CYK--NKWLSYRKIGQCRMP-FLFISGLKDELVPPVMMRQLYELCPSRT--KRLAEFP---DG 260 (300)
T ss_pred cchhhHHHHH-------HHH--hhhcchhhhccccCc-eEEeecCccccCCcHHHHHHHHhCchhh--hhheeCC---CC
Confidence 1110000000 000 134555566666788 9999999999999999999998876543 3455665 88
Q ss_pred CccCCCchHHHHHHHHHHHHHHHHhcCC
Q 006375 612 GHFSKSGRFERLREAAFTYTFLMRALSM 639 (648)
Q Consensus 612 gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 639 (648)
.|....-..-.++. +-+||.+.-..
T Consensus 261 tHNDT~i~dGYfq~---i~dFlaE~~~~ 285 (300)
T KOG4391|consen 261 THNDTWICDGYFQA---IEDFLAEVVKS 285 (300)
T ss_pred ccCceEEeccHHHH---HHHHHHHhccC
Confidence 89653322222332 23677776543
No 55
>PRK10985 putative hydrolase; Provisional
Probab=99.62 E-value=1.9e-14 Score=147.27 Aligned_cols=244 Identities=16% Similarity=0.141 Sum_probs=141.4
Q ss_pred EEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhc
Q 006375 377 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 456 (648)
Q Consensus 377 ~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~ 456 (648)
++..++..||..+.......+. ...+.|+||++||..+..........+..|.++||.|+++|+||.|+.......
T Consensus 32 ~~~~~~~~dg~~~~l~w~~~~~---~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~- 107 (324)
T PRK10985 32 YWQRLELPDGDFVDLAWSEDPA---QARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR- 107 (324)
T ss_pred ceeEEECCCCCEEEEecCCCCc---cCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc-
Confidence 3344667788776654332111 123569999999976554332223345678889999999999998754322111
Q ss_pred ccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCc--eeEEEecCCcccccccc--cCC---
Q 006375 457 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL--FKAAVAAVPFVDVLTTM--LDP--- 529 (648)
Q Consensus 457 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~--~~a~v~~~~~~d~~~~~--~~~--- 529 (648)
.......+|+.++++++.++. ...++.++|+||||.+++.++.++++. +.++|+.++..|+.... +..
T Consensus 108 ---~~~~~~~~D~~~~i~~l~~~~--~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~ 182 (324)
T PRK10985 108 ---IYHSGETEDARFFLRWLQREF--GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFS 182 (324)
T ss_pred ---eECCCchHHHHHHHHHHHHhC--CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHH
Confidence 111234689999999998763 236799999999999888777776543 77777777765532110 000
Q ss_pred ------------------------CCCCCc------cccccc----CCC--CCHHHHHHHHcCCccccCCCCCCCeEEEe
Q 006375 530 ------------------------TIPLTT------AEWEEW----GDP--WKEEFYFYMKSYSPVDNVKAQNYPHILVT 573 (648)
Q Consensus 530 ------------------------~~~~~~------~~~~~~----g~~--~~~~~~~~~~~~sp~~~~~~~~~P~~li~ 573 (648)
..+... ....+| ..+ ......+++...++...++++++| +|++
T Consensus 183 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P-~lii 261 (324)
T PRK10985 183 RVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKP-TLII 261 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCC-EEEE
Confidence 000000 000011 011 011123344455666667788998 9999
Q ss_pred ecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCc----hHHHHHHHHHHHHHHHHhcC
Q 006375 574 AGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG----RFERLREAAFTYTFLMRALS 638 (648)
Q Consensus 574 ~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~----~~~~~~~~~~~~~fl~~~l~ 638 (648)
+|++|+.+++.....+.+ .....+++++ +++||..... ....|-+ ..+.+||...++
T Consensus 262 ~g~~D~~~~~~~~~~~~~----~~~~~~~~~~---~~~GH~~~~~g~~~~~~~w~~-~~~~~~~~~~~~ 322 (324)
T PRK10985 262 HAKDDPFMTHEVIPKPES----LPPNVEYQLT---EHGGHVGFVGGTLLKPQMWLE-QRIPDWLTTYLE 322 (324)
T ss_pred ecCCCCCCChhhChHHHH----hCCCeEEEEC---CCCCceeeCCCCCCCCCccHH-HHHHHHHHHhhc
Confidence 999999998765544422 1112233333 3889954321 1222333 246788876654
No 56
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.62 E-value=1.4e-14 Score=136.12 Aligned_cols=194 Identities=18% Similarity=0.179 Sum_probs=121.4
Q ss_pred EEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHC-CCEEEEEccCCCCCCChhhhhc-ccccCCCCcHhH
Q 006375 391 ICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYEN-GKFLKKKNTFTD 468 (648)
Q Consensus 391 ~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~rG~g~~g~~~~~~-~~~~~~~~~~~D 468 (648)
..|+.|+.. +.++.|+||++||+.+......-...+..++++ ||+|+.|+-.........|.-. ........+...
T Consensus 3 Y~lYvP~~~--~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~ 80 (220)
T PF10503_consen 3 YRLYVPPGA--PRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAF 80 (220)
T ss_pred EEEecCCCC--CCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhh
Confidence 456677754 335789999999986654321111224567765 9999999864332233333211 112223345566
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHH
Q 006375 469 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEE 548 (648)
Q Consensus 469 ~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~ 548 (648)
+.+.++++..+..+|++||.++|.|+||.|+..++..+||+|+|+.+.+|..--... + .. .......-|....+.
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~--~-~~--~a~~~m~~g~~~~p~ 155 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAA--S-GA--SALSAMRSGPRPAPA 155 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccccccc--C-cc--cHHHHhhCCCCCChH
Confidence 778899999999999999999999999999999999999999998888775321100 0 00 000000112222222
Q ss_pred HHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhc
Q 006375 549 FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 596 (648)
Q Consensus 549 ~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~ 596 (648)
........+.. . ..+| ++|+||+.|..|.+....++.+.+...
T Consensus 156 ~~~~a~~~~g~--~--~~~P-~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 156 AAWGARSDAGA--Y--PGYP-RIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred HHHHhhhhccC--C--CCCC-EEEEecCCCCccCcchHHHHHHHHHHc
Confidence 21111111110 1 1356 889999999999999999998888754
No 57
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.61 E-value=1.9e-15 Score=145.11 Aligned_cols=187 Identities=21% Similarity=0.254 Sum_probs=120.8
Q ss_pred EEEecCCCCCCCCCCCc-hhHHHHHH-CCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHc---CCCC
Q 006375 409 LLYGYGSYEICNDPAFN-SSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN---CYCT 483 (648)
Q Consensus 409 vl~~hGg~~~~~~~~~~-~~~~~l~~-~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d 483 (648)
||++|||.......... .....+++ +|++|+++|||-..+. .-...++|+.++++|+.++ ...|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~-----------~~p~~~~D~~~a~~~l~~~~~~~~~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA-----------PFPAALEDVKAAYRWLLKNADKLGID 69 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS-----------STTHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc-----------cccccccccccceeeecccccccccc
Confidence 79999987765544333 33456665 7999999999976542 2235689999999999987 3478
Q ss_pred CCeEEEEeeChhHHHHHHHHhhCCC----ceeEEEecCCcccccccc---c-----CCCCCCC-cccc----cccCCCCC
Q 006375 484 KEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVLTTM---L-----DPTIPLT-TAEW----EEWGDPWK 546 (648)
Q Consensus 484 ~~~i~i~G~S~GG~l~~~~~~~~p~----~~~a~v~~~~~~d~~~~~---~-----~~~~~~~-~~~~----~~~g~~~~ 546 (648)
+++|+++|.|+||.|++.++.+..+ .++++++.+|.+|+.... . ....+.. .... ..+- +..
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 148 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYL-PGS 148 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHH-STG
T ss_pred ccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccccccccccccccccccccccccc-ccc
Confidence 9999999999999999888875322 489999999998871110 0 0000110 0000 0010 000
Q ss_pred HHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccC
Q 006375 547 EEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 615 (648)
Q Consensus 547 ~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~ 615 (648)
... -...+|+..-...+.||++|++|+.|..+ .++.+|+++|++.|+++++++++ +.+|..
T Consensus 149 ~~~---~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~---g~~H~f 209 (211)
T PF07859_consen 149 DRD---DPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYP---GMPHGF 209 (211)
T ss_dssp GTT---STTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEET---TEETTG
T ss_pred ccc---ccccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEEC---CCeEEe
Confidence 000 01346665512226889999999999775 58999999999999988777775 788853
No 58
>PLN02511 hydrolase
Probab=99.61 E-value=2.6e-14 Score=149.34 Aligned_cols=248 Identities=15% Similarity=0.140 Sum_probs=144.8
Q ss_pred ceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhh
Q 006375 375 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 454 (648)
Q Consensus 375 ~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~ 454 (648)
..++..+...||..+....+.+... ......|+||++||..+.+....+......++++||.|+++|+||.|+....
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~-~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~-- 146 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDR-ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVT-- 146 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccc-cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCC--
Confidence 3455567778988777654432211 1223468999999976654432122334566789999999999998865321
Q ss_pred hcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCc--eeEEEecCCcccccccc--cCCC
Q 006375 455 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL--FKAAVAAVPFVDVLTTM--LDPT 530 (648)
Q Consensus 455 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~--~~a~v~~~~~~d~~~~~--~~~~ 530 (648)
..........+|+.+++++|..+. ...++.++|+|+||.+++.++.++|+. +.++++.++..|+.... +...
T Consensus 147 --~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~ 222 (388)
T PLN02511 147 --TPQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKG 222 (388)
T ss_pred --CcCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhcc
Confidence 011112245689999999998763 235899999999999999999999886 67766666555531000 0000
Q ss_pred C--------------------------C--C---------Ccccccc-cCCC--CCHHHHHHHHcCCccccCCCCCCCeE
Q 006375 531 I--------------------------P--L---------TTAEWEE-WGDP--WKEEFYFYMKSYSPVDNVKAQNYPHI 570 (648)
Q Consensus 531 ~--------------------------~--~---------~~~~~~~-~g~~--~~~~~~~~~~~~sp~~~~~~~~~P~~ 570 (648)
. + + ...+|.+ +..+ ......+++...|+...+.++++| +
T Consensus 223 ~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vP-t 301 (388)
T PLN02511 223 FNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVP-L 301 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCC-e
Confidence 0 0 0 0000000 0000 000111233455677788889999 9
Q ss_pred EEeecCCCCccCCchH-HHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHH------HHHHHHHHHHHHHhcCC
Q 006375 571 LVTAGLNDPRVMYSEP-AKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER------LREAAFTYTFLMRALSM 639 (648)
Q Consensus 571 li~~g~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~------~~~~~~~~~fl~~~l~~ 639 (648)
|+++|.+|+.+|.... ....+ .....+++++ +++||....+.... +++ .+.+||......
T Consensus 302 LiI~g~dDpi~p~~~~~~~~~~----~~p~~~l~~~---~~gGH~~~~E~p~~~~~~~w~~~--~i~~Fl~~~~~~ 368 (388)
T PLN02511 302 LCIQAANDPIAPARGIPREDIK----ANPNCLLIVT---PSGGHLGWVAGPEAPFGAPWTDP--VVMEFLEALEEG 368 (388)
T ss_pred EEEEcCCCCcCCcccCcHhHHh----cCCCEEEEEC---CCcceeccccCCCCCCCCccHHH--HHHHHHHHHHHh
Confidence 9999999999987543 22222 1222333344 38999665443321 122 456777765533
No 59
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.57 E-value=3.2e-14 Score=143.35 Aligned_cols=239 Identities=19% Similarity=0.211 Sum_probs=139.0
Q ss_pred CcceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChh
Q 006375 373 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 452 (648)
Q Consensus 373 ~~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~ 452 (648)
.+..+++.++-.+ .+|++++..|+. +++.|+||++=|.-+.. ...+......|+.+|++++.+|.+|.|... .
T Consensus 162 ~~~i~~v~iP~eg-~~I~g~LhlP~~----~~p~P~VIv~gGlDs~q-eD~~~l~~~~l~~rGiA~LtvDmPG~G~s~-~ 234 (411)
T PF06500_consen 162 DYPIEEVEIPFEG-KTIPGYLHLPSG----EKPYPTVIVCGGLDSLQ-EDLYRLFRDYLAPRGIAMLTVDMPGQGESP-K 234 (411)
T ss_dssp SSEEEEEEEEETT-CEEEEEEEESSS----SS-EEEEEEE--TTS-G-GGGHHHHHCCCHHCT-EEEEE--TTSGGGT-T
T ss_pred CCCcEEEEEeeCC-cEEEEEEEcCCC----CCCCCEEEEeCCcchhH-HHHHHHHHHHHHhCCCEEEEEccCCCcccc-c
Confidence 4567888888655 789999887764 36789888875533222 111122223578899999999999988642 2
Q ss_pred hhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccc-cccc-ccCCC
Q 006375 453 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD-VLTT-MLDPT 530 (648)
Q Consensus 453 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d-~~~~-~~~~~ 530 (648)
|. .. +..-.=..++++||...+++|..||+++|.|+||+.|.++|..++++++|+|+..|+++ +++. .....
T Consensus 235 ~~-----l~-~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~ 308 (411)
T PF06500_consen 235 WP-----LT-QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQR 308 (411)
T ss_dssp T------S--S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTT
T ss_pred CC-----CC-cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhc
Confidence 22 11 11123356889999999999999999999999999999999877889999998887643 3321 11112
Q ss_pred CCCCccc-c-cccCCC--CCHHHHHHHHcCCcccc--C--CCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCe
Q 006375 531 IPLTTAE-W-EEWGDP--WKEEFYFYMKSYSPVDN--V--KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 602 (648)
Q Consensus 531 ~~~~~~~-~-~~~g~~--~~~~~~~~~~~~sp~~~--~--~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~ 602 (648)
.|..... + ...|.. .+......+..||-..+ + ++..+| +|.+.+++|+++|.+++.-++ ..+.+.+.
T Consensus 309 ~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~p-lL~i~~~~D~v~P~eD~~lia----~~s~~gk~ 383 (411)
T PF06500_consen 309 VPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTP-LLAINGEDDPVSPIEDSRLIA----ESSTDGKA 383 (411)
T ss_dssp S-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS--EEEEEETT-SSS-HHHHHHHH----HTBTT-EE
T ss_pred CCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcc-eEEeecCCCCCCCHHHHHHHH----hcCCCCce
Confidence 3321111 1 233533 23333345677887543 3 444677 999999999999987764443 33445556
Q ss_pred EEEEecCCCCccCCCchHHHHHHHHHHHHHHHHhc
Q 006375 603 LLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 637 (648)
Q Consensus 603 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 637 (648)
..++. +.-|.+ ..+ .+..++.||.++|
T Consensus 384 ~~~~~--~~~~~g---y~~---al~~~~~Wl~~~l 410 (411)
T PF06500_consen 384 LRIPS--KPLHMG---YPQ---ALDEIYKWLEDKL 410 (411)
T ss_dssp EEE-S--SSHHHH---HHH---HHHHHHHHHHHHH
T ss_pred eecCC--Cccccc---hHH---HHHHHHHHHHHhc
Confidence 66662 222422 222 2335689998875
No 60
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.57 E-value=3.1e-14 Score=143.29 Aligned_cols=209 Identities=15% Similarity=0.136 Sum_probs=121.6
Q ss_pred CcEEEEecCCCCCCCCCC-CchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCC
Q 006375 406 DPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 484 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 484 (648)
.|.||++||.......+. +...+..+++.||.|+++|+||.|........ . .......+|+.+.++.+ +.
T Consensus 30 ~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~--~-~~~~~~~~~l~~~l~~l------~~ 100 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMD--E-QRGLVNARAVKGLMDAL------DI 100 (282)
T ss_pred CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCc--c-cccchhHHHHHHHHHHc------CC
Confidence 467999999544332221 11223466778999999999998865332110 0 00001234444433332 44
Q ss_pred CeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccC-C-----------CCCCCccccc----cc-CCC---
Q 006375 485 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD-P-----------TIPLTTAEWE----EW-GDP--- 544 (648)
Q Consensus 485 ~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~-~-----------~~~~~~~~~~----~~-g~~--- 544 (648)
+++.++|+||||.++..++.++|++++++|+.+|.......... + ..+. ...+. .+ -++
T Consensus 101 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 179 (282)
T TIGR03343 101 EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPS-YETLKQMLNVFLFDQSLI 179 (282)
T ss_pred CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCC-HHHHHHHHhhCccCcccC
Confidence 79999999999999999999999999999988764211000000 0 0000 00000 00 000
Q ss_pred -------------CCHHHH-HHHHc--------CCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCe
Q 006375 545 -------------WKEEFY-FYMKS--------YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 602 (648)
Q Consensus 545 -------------~~~~~~-~~~~~--------~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~ 602 (648)
..+... ..+.. +.....++++++| +|+++|++|..|++..+.++.+.+. ..++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlli~G~~D~~v~~~~~~~~~~~~~----~~~~ 254 (282)
T TIGR03343 180 TEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAK-TLVTWGRDDRFVPLDHGLKLLWNMP----DAQL 254 (282)
T ss_pred cHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCC-EEEEEccCCCcCCchhHHHHHHhCC----CCEE
Confidence 001111 11111 1112345677898 9999999999999988888877764 3455
Q ss_pred EEEEecCCCCccCCCchHHHHHHHHHHHHHHH
Q 006375 603 LLFKCELGAGHFSKSGRFERLREAAFTYTFLM 634 (648)
Q Consensus 603 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 634 (648)
++++ ++||+....+.+.+.+ .+.+||.
T Consensus 255 ~~i~---~agH~~~~e~p~~~~~--~i~~fl~ 281 (282)
T TIGR03343 255 HVFS---RCGHWAQWEHADAFNR--LVIDFLR 281 (282)
T ss_pred EEeC---CCCcCCcccCHHHHHH--HHHHHhh
Confidence 6665 8999887776665544 4466764
No 61
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.56 E-value=6.2e-14 Score=138.66 Aligned_cols=207 Identities=17% Similarity=0.196 Sum_probs=123.7
Q ss_pred CCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCC
Q 006375 405 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 484 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 484 (648)
+.|+||++||..+... .|...+. .+.+||.|+++|+||.|...... .....++|....+..+++. .+.
T Consensus 12 ~~~~iv~lhG~~~~~~--~~~~~~~-~l~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~i~~--~~~ 79 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGS--YWAPQLD-VLTQRFHVVTYDHRGTGRSPGEL-------PPGYSIAHMADDVLQLLDA--LNI 79 (257)
T ss_pred CCCEEEEEcCCCcchh--HHHHHHH-HHHhccEEEEEcCCCCCCCCCCC-------cccCCHHHHHHHHHHHHHH--hCC
Confidence 4689999999655432 2333333 34568999999999988764321 1112445555444444433 245
Q ss_pred CeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccc-----------cCCCCC---------CCcccc-cc---
Q 006375 485 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM-----------LDPTIP---------LTTAEW-EE--- 540 (648)
Q Consensus 485 ~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~-----------~~~~~~---------~~~~~~-~~--- 540 (648)
.++.++|+|+||.++..++.++|+.++++|+..++.+..... ...... .....| ..
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAA 159 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccch
Confidence 789999999999999999999999999999887754321000 000000 000000 00
Q ss_pred ---------cCCC-CCHH---HHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEe
Q 006375 541 ---------WGDP-WKEE---FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 607 (648)
Q Consensus 541 ---------~g~~-~~~~---~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 607 (648)
.... .... ....+..++....++++++| +|+++|++|..+|+.+++++++.+.. .+.+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~- 233 (257)
T TIGR03611 160 RLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHP-VLLIANRDDMLVPYTQSLRLAAALPN----AQLKLLP- 233 (257)
T ss_pred hhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCcc-EEEEecCcCcccCHHHHHHHHHhcCC----ceEEEEC-
Confidence 0000 0000 11122334444556677888 99999999999999998888876642 3344554
Q ss_pred cCCCCccCCCchHHHHHHHHHHHHHH
Q 006375 608 ELGAGHFSKSGRFERLREAAFTYTFL 633 (648)
Q Consensus 608 ~~~~gH~~~~~~~~~~~~~~~~~~fl 633 (648)
++||.......+.+.+ .+.+||
T Consensus 234 --~~gH~~~~~~~~~~~~--~i~~fl 255 (257)
T TIGR03611 234 --YGGHASNVTDPETFNR--ALLDFL 255 (257)
T ss_pred --CCCCCccccCHHHHHH--HHHHHh
Confidence 7899765555543333 345665
No 62
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.56 E-value=2.1e-14 Score=128.74 Aligned_cols=145 Identities=19% Similarity=0.296 Sum_probs=105.9
Q ss_pred EEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeE
Q 006375 408 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKL 487 (648)
Q Consensus 408 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i 487 (648)
+||++||+.+. ...|...+..|+++||.|+.+|+|+.+.... . .++..+++++.... .|+++|
T Consensus 1 ~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~--~------------~~~~~~~~~~~~~~-~~~~~i 63 (145)
T PF12695_consen 1 VVVLLHGWGGS--RRDYQPLAEALAEQGYAVVAFDYPGHGDSDG--A------------DAVERVLADIRAGY-PDPDRI 63 (145)
T ss_dssp EEEEECTTTTT--THHHHHHHHHHHHTTEEEEEESCTTSTTSHH--S------------HHHHHHHHHHHHHH-CTCCEE
T ss_pred CEEEECCCCCC--HHHHHHHHHHHHHCCCEEEEEecCCCCccch--h------------HHHHHHHHHHHhhc-CCCCcE
Confidence 58999997654 3346677789999999999999998876511 1 25555555553322 288999
Q ss_pred EEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHHHHHHHHcCCccccCCCCCC
Q 006375 488 CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNY 567 (648)
Q Consensus 488 ~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~ 567 (648)
+++|+|+||.++..++.++ ..++++|+..|+.+. . .+.+.+.
T Consensus 64 ~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~~----------------~---------------------~~~~~~~ 105 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPDS----------------E---------------------DLAKIRI 105 (145)
T ss_dssp EEEEETHHHHHHHHHHHHS-TTESEEEEESESSGC----------------H---------------------HHTTTTS
T ss_pred EEEEEccCcHHHHHHhhhc-cceeEEEEecCccch----------------h---------------------hhhccCC
Confidence 9999999999999999987 579999999983110 0 0112334
Q ss_pred CeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCcc
Q 006375 568 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 614 (648)
Q Consensus 568 P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~ 614 (648)
| +|+++|++|+.+++.+..+++++++ .+.+++.++ +++|+
T Consensus 106 p-v~~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i~---g~~H~ 145 (145)
T PF12695_consen 106 P-VLFIHGENDPLVPPEQVRRLYEALP---GPKELYIIP---GAGHF 145 (145)
T ss_dssp E-EEEEEETT-SSSHHHHHHHHHHHHC---SSEEEEEET---TS-TT
T ss_pred c-EEEEEECCCCcCCHHHHHHHHHHcC---CCcEEEEeC---CCcCc
Confidence 5 9999999999999999999999887 344555554 88984
No 63
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.56 E-value=2.4e-15 Score=148.53 Aligned_cols=143 Identities=19% Similarity=0.187 Sum_probs=91.2
Q ss_pred CCcceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCC----CCC---------C---CchhHHHHHHCC
Q 006375 372 NNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC----NDP---------A---FNSSRLSLLDRG 435 (648)
Q Consensus 372 ~~~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~----~~~---------~---~~~~~~~l~~~G 435 (648)
..|..|.+.+.+.++..+|++++.|++. .++.|+||++||-.+.. ..+ . .......|+.+|
T Consensus 84 dGY~~EKv~f~~~p~~~vpaylLvPd~~---~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~G 160 (390)
T PF12715_consen 84 DGYTREKVEFNTTPGSRVPAYLLVPDGA---KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRG 160 (390)
T ss_dssp TTEEEEEEEE--STTB-EEEEEEEETT-----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTT
T ss_pred CCeEEEEEEEEccCCeeEEEEEEecCCC---CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCC
Confidence 4688999999999999999999999874 47899999999821110 000 0 112356899999
Q ss_pred CEEEEEccCCCCCCChhhh-----------------hcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHH
Q 006375 436 FIFAIAQIRGGGELGRQWY-----------------ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLL 498 (648)
Q Consensus 436 ~~v~~~~~rG~g~~g~~~~-----------------~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l 498 (648)
|+|+++|.+|-|+.|..=+ ..|....+...++| ..+++||..+..+|++||+++|+||||+.
T Consensus 161 YVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~dd-mr~lDfL~slpeVD~~RIG~~GfSmGg~~ 239 (390)
T PF12715_consen 161 YVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDD-MRALDFLASLPEVDPDRIGCMGFSMGGYR 239 (390)
T ss_dssp SEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHH-HHHHHHHCT-TTEEEEEEEEEEEGGGHHH
T ss_pred CEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHH-HHHHHHHhcCcccCccceEEEeecccHHH
Confidence 9999999999887654211 11111112234455 55999999999999999999999999999
Q ss_pred HHHHHhhCCCceeEEEecCCc
Q 006375 499 IGAVLNMRPDLFKAAVAAVPF 519 (648)
Q Consensus 499 ~~~~~~~~p~~~~a~v~~~~~ 519 (648)
+..+++..+ +++|+|+.+-+
T Consensus 240 a~~LaALDd-RIka~v~~~~l 259 (390)
T PF12715_consen 240 AWWLAALDD-RIKATVANGYL 259 (390)
T ss_dssp HHHHHHH-T-T--EEEEES-B
T ss_pred HHHHHHcch-hhHhHhhhhhh
Confidence 998888764 67887766543
No 64
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.54 E-value=6.3e-13 Score=135.12 Aligned_cols=238 Identities=16% Similarity=0.162 Sum_probs=134.9
Q ss_pred eEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhh
Q 006375 376 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 455 (648)
Q Consensus 376 ~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 455 (648)
.+.+.+...+|.++...+. ..+ . ...|.||++||.++.. ..|...+..|.++||.|+++|.||.|......
T Consensus 21 ~~~~~~~~~~~~~~~i~y~-~~G--~--~~~~~lvliHG~~~~~--~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~-- 91 (302)
T PRK00870 21 PHYVDVDDGDGGPLRMHYV-DEG--P--ADGPPVLLLHGEPSWS--YLYRKMIPILAAAGHRVIAPDLIGFGRSDKPT-- 91 (302)
T ss_pred ceeEeecCCCCceEEEEEE-ecC--C--CCCCEEEEECCCCCch--hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--
Confidence 4556666556665554422 222 1 1247899999965433 23566666777789999999999988653211
Q ss_pred cccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccc--------ccc
Q 006375 456 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--------TML 527 (648)
Q Consensus 456 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~--------~~~ 527 (648)
.....+++++.+.+..++++ .+.+++.++|||+||.++..++.++|++++++|+.++..-... ...
T Consensus 92 ----~~~~~~~~~~a~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 165 (302)
T PRK00870 92 ----RREDYTYARHVEWMRSWFEQ--LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWR 165 (302)
T ss_pred ----CcccCCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhh
Confidence 11123456666555555543 2336899999999999999999999999999998875321000 000
Q ss_pred C--CCCCC-Ccccc--------------cccCCCC-CHH---HHHHH---HcCCc-----------cccCCCCCCCeEEE
Q 006375 528 D--PTIPL-TTAEW--------------EEWGDPW-KEE---FYFYM---KSYSP-----------VDNVKAQNYPHILV 572 (648)
Q Consensus 528 ~--~~~~~-~~~~~--------------~~~g~~~-~~~---~~~~~---~~~sp-----------~~~~~~~~~P~~li 572 (648)
. ...+. ....+ ..+..+. ... ....+ ....+ ...+.++++| +|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~li 244 (302)
T PRK00870 166 AFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKP-FLT 244 (302)
T ss_pred cccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCc-eEE
Confidence 0 00000 00000 0111110 000 00000 00000 0234667898 999
Q ss_pred eecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHh
Q 006375 573 TAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 636 (648)
Q Consensus 573 ~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 636 (648)
++|++|+.+|... +++.+.+.... ...+++++ ++||+......+.+.. .+..||.++
T Consensus 245 i~G~~D~~~~~~~-~~~~~~~~~~~-~~~~~~i~---~~gH~~~~e~p~~~~~--~l~~fl~~~ 301 (302)
T PRK00870 245 AFSDSDPITGGGD-AILQKRIPGAA-GQPHPTIK---GAGHFLQEDSGEELAE--AVLEFIRAT 301 (302)
T ss_pred EecCCCCcccCch-HHHHhhccccc-ccceeeec---CCCccchhhChHHHHH--HHHHHHhcC
Confidence 9999999999755 66666555321 12244555 8899876555554433 456777653
No 65
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.53 E-value=9.2e-14 Score=129.78 Aligned_cols=178 Identities=19% Similarity=0.163 Sum_probs=121.8
Q ss_pred CCCeEEeEEEEEeeCccccCCCC-cEEEEecCCCCCCCCCCCc----hhHHHHHH--CCCEEEEEccCCCCCCChhhhhc
Q 006375 384 SDGTQIPICIVYRKNLVKLDGSD-PLLLYGYGSYEICNDPAFN----SSRLSLLD--RGFIFAIAQIRGGGELGRQWYEN 456 (648)
Q Consensus 384 ~~g~~i~~~l~~~~~~~~~~~~~-P~vl~~hGg~~~~~~~~~~----~~~~~l~~--~G~~v~~~~~rG~g~~g~~~~~~ 456 (648)
..|.+++..++.|++. .+++++ |+||++||+...+.+..-. ..+..|+. -++-|++|.|- .-+.+
T Consensus 169 ~tgneLkYrly~Pkdy-~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~------~if~d- 240 (387)
T COG4099 169 STGNELKYRLYTPKDY-APDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYN------PIFAD- 240 (387)
T ss_pred ccCceeeEEEeccccc-CCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccc------ccccc-
Confidence 4577899999999998 788887 9999999975544332100 00111111 13345555421 11111
Q ss_pred ccccCCCCcHhHHHHHHH-HHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCc
Q 006375 457 GKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT 535 (648)
Q Consensus 457 ~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~ 535 (648)
...+..+.....++.++ -|.++..+|.+||.+.|.|+||+.+.+++.++|+.|+|+++.+|--|-.
T Consensus 241 -~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v------------ 307 (387)
T COG4099 241 -SEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRV------------ 307 (387)
T ss_pred -cccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchh------------
Confidence 11122234455566666 6778889999999999999999999999999999999999998743310
Q ss_pred ccccccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEE
Q 006375 536 AEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 606 (648)
Q Consensus 536 ~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 606 (648)
...+++. +.| +.+.|+.+|.++|.+.++-.+++|+..+.+.+..-+.
T Consensus 308 ------------------~lv~~lk-----~~p-iWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 308 ------------------YLVRTLK-----KAP-IWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred ------------------hhhhhhc-----cCc-eEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 0112222 345 9999999999999999999999999988765544443
No 66
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.51 E-value=1.7e-12 Score=134.96 Aligned_cols=207 Identities=13% Similarity=0.091 Sum_probs=147.9
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee-ccccCccceeEEecCC-eEEEEEeCCCCCCceEEEEEC
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~-~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l 158 (648)
..+-.+.|||||+.++|..-..+. ..+++++++++|+... ....+....++||||| +|+|+...+ ...+||.+++
T Consensus 193 ~~~~~p~ws~~~~~~~y~~f~~~~-~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rd--g~~~iy~~dl 269 (425)
T COG0823 193 SLILTPAWSPDGKKLAYVSFELGG-CPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRD--GSPDIYLMDL 269 (425)
T ss_pred cceeccccCcCCCceEEEEEecCC-CceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCC--CCccEEEEcC
Confidence 445578999999999999765542 3789999999987543 3456666679999999 999988754 5678999999
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccce-eeeEeecCCEEEEEe
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITR 237 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~ 237 (648)
.+.+. .. .+.. ......+.|||||++|+|.+++.+..+||+++++++. .++++....+. ...|||||++|+|.+
T Consensus 270 ~~~~~--~~-Lt~~-~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~-~~riT~~~~~~~~p~~SpdG~~i~~~~ 344 (425)
T COG0823 270 DGKNL--PR-LTNG-FGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQ-VTRLTFSGGGNSNPVWSPDGDKIVFES 344 (425)
T ss_pred CCCcc--ee-cccC-CccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCc-eeEeeccCCCCcCccCCCCCCEEEEEe
Confidence 98742 22 2222 3344478999999999999999999999999999998 77787655443 456999999999998
Q ss_pred ccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 238 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
.. .....++..++......+ +...........+...+..+++.....+.+.+.....+
T Consensus 345 ~~--~g~~~i~~~~~~~~~~~~-~lt~~~~~e~ps~~~ng~~i~~~s~~~~~~~l~~~s~~ 402 (425)
T COG0823 345 SS--GGQWDIDKNDLASGGKIR-ILTSTYLNESPSWAPNGRMIMFSSGQGGGSVLSLVSLD 402 (425)
T ss_pred cc--CCceeeEEeccCCCCcEE-EccccccCCCCCcCCCCceEEEeccCCCCceEEEeecc
Confidence 43 223778888886533322 44444333344455555566655555555666655555
No 67
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.51 E-value=1.4e-11 Score=131.12 Aligned_cols=235 Identities=12% Similarity=0.104 Sum_probs=148.8
Q ss_pred CCEEEEEEeCCC-CeEEEEEEEECCCCCeeeccc-cCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEE
Q 006375 92 NKLVAYAEDTKG-DEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICL 168 (648)
Q Consensus 92 G~~la~~~~~~G-~e~~~l~v~dl~~g~~~~~~~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~ 168 (648)
+++|||.....+ ....+|+++|.++......+. ......+.||||| .|+|++.+. ...+||++++.++. ...+
T Consensus 168 ~~ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~--~~~~i~i~dl~tg~--~~~l 243 (429)
T PRK01742 168 RTRIAYVVQKNGGSQPYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFEN--KKSQLVVHDLRSGA--RKVV 243 (429)
T ss_pred CCEEEEEEEEcCCCceEEEEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecC--CCcEEEEEeCCCCc--eEEE
Confidence 688999976543 446899999998876544322 3334569999999 999988642 34679999998763 2233
Q ss_pred EeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-ceeeeEeecCCEEEEEeccCCCCCcEE
Q 006375 169 YHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSEL 247 (648)
Q Consensus 169 ~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~l 247 (648)
... ......+.|||||++|++.+...+..+||++|++++. .+.++.... .....|+|||++|+|.+++++ ..+|
T Consensus 244 ~~~--~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g--~~~I 318 (429)
T PRK01742 244 ASF--RGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSG--SPQV 318 (429)
T ss_pred ecC--CCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCC--CceE
Confidence 221 1223357899999999997766666789999998887 677765432 234679999999999988643 4689
Q ss_pred EEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCCC
Q 006375 248 LACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSES 327 (648)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~ 327 (648)
+.++..+ +..+ ++.... ....++++++.+++... ..+.++++. ++....++.. +......+
T Consensus 319 ~~~~~~~-~~~~-~l~~~~--~~~~~SpDG~~ia~~~~----~~i~~~Dl~--~g~~~~lt~~---------~~~~~~~~ 379 (429)
T PRK01742 319 YRMSASG-GGAS-LVGGRG--YSAQISADGKTLVMING----DNVVKQDLT--SGSTEVLSST---------FLDESPSI 379 (429)
T ss_pred EEEECCC-CCeE-EecCCC--CCccCCCCCCEEEEEcC----CCEEEEECC--CCCeEEecCC---------CCCCCceE
Confidence 9998865 2233 333222 22346667777766543 346667776 3322222111 11223456
Q ss_pred cccccEEEEEEeeCCCCCEEEEEECCCC
Q 006375 328 VFSSRILRFHYSSLRTPPSVYDYDMDMG 355 (648)
Q Consensus 328 ~~~~~~l~~~~ss~~~P~~~~~~d~~~~ 355 (648)
++++..+.+... ...-..++..+...+
T Consensus 380 sPdG~~i~~~s~-~g~~~~l~~~~~~G~ 406 (429)
T PRK01742 380 SPNGIMIIYSST-QGLGKVLQLVSADGR 406 (429)
T ss_pred CCCCCEEEEEEc-CCCceEEEEEECCCC
Confidence 778886665543 333334555555433
No 68
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.51 E-value=4.3e-13 Score=137.35 Aligned_cols=241 Identities=13% Similarity=0.086 Sum_probs=132.3
Q ss_pred EeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCC--------------------CC----chhHHHHHHCCC
Q 006375 381 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP--------------------AF----NSSRLSLLDRGF 436 (648)
Q Consensus 381 ~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~--------------------~~----~~~~~~l~~~G~ 436 (648)
+.+.||.+|......|+ .+..+|+++||-.+..... .| ...+..|.++||
T Consensus 2 ~~~~~g~~l~~~~~~~~------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~ 75 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGY 75 (332)
T ss_pred ccCCCCCeEEEeeeecc------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCC
Confidence 45678988887754443 2346999999954433211 11 234678889999
Q ss_pred EEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHc------------------CCCCCCeEEEEeeChhHHH
Q 006375 437 IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN------------------CYCTKEKLCIEGRSAGGLL 498 (648)
Q Consensus 437 ~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~------------------~~~d~~~i~i~G~S~GG~l 498 (648)
.|+++|.||+|.....-...+.-..-..-++|+...++.+.+. .+-....+.++||||||.+
T Consensus 76 ~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i 155 (332)
T TIGR01607 76 SVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNI 155 (332)
T ss_pred cEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHH
Confidence 9999999999864321000000001112235555555555431 1111357999999999999
Q ss_pred HHHHHhhCCC--------ceeEEEecCCcccccccc--------------------cCCCCCCCc-c--cc-----ccc-
Q 006375 499 IGAVLNMRPD--------LFKAAVAAVPFVDVLTTM--------------------LDPTIPLTT-A--EW-----EEW- 541 (648)
Q Consensus 499 ~~~~~~~~p~--------~~~a~v~~~~~~d~~~~~--------------------~~~~~~~~~-~--~~-----~~~- 541 (648)
+..++.+.++ .++++|+.+|.+.+.... ..+.+.... . .+ ..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T TIGR01607 156 ALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIK 235 (332)
T ss_pred HHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHh
Confidence 9988765432 588899888875432100 011111000 0 00 000
Q ss_pred CCCC--C----HHHHHHHHcCC--ccccCCCC--CCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCC
Q 006375 542 GDPW--K----EEFYFYMKSYS--PVDNVKAQ--NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 611 (648)
Q Consensus 542 g~~~--~----~~~~~~~~~~s--p~~~~~~~--~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 611 (648)
-+|. + ...+..+.... ....+.++ ++| +|++||++|..|++..+.++++++... ..++++++ ++
T Consensus 236 ~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P-~Lii~G~~D~vv~~~~~~~~~~~~~~~--~~~l~~~~---g~ 309 (332)
T TIGR01607 236 FDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIP-ILFIHSKGDCVCSYEGTVSFYNKLSIS--NKELHTLE---DM 309 (332)
T ss_pred cCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCC-EEEEEeCCCCccCHHHHHHHHHhccCC--CcEEEEEC---CC
Confidence 1110 0 00111111110 01133334 577 999999999999999988888776532 34455665 88
Q ss_pred CccCCCchHHHHHHHHHHHHHHH
Q 006375 612 GHFSKSGRFERLREAAFTYTFLM 634 (648)
Q Consensus 612 gH~~~~~~~~~~~~~~~~~~fl~ 634 (648)
+|....... .-+...++.+||.
T Consensus 310 ~H~i~~E~~-~~~v~~~i~~wL~ 331 (332)
T TIGR01607 310 DHVITIEPG-NEEVLKKIIEWIS 331 (332)
T ss_pred CCCCccCCC-HHHHHHHHHHHhh
Confidence 997654321 1222335678874
No 69
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.51 E-value=1e-13 Score=133.16 Aligned_cols=190 Identities=17% Similarity=0.189 Sum_probs=105.1
Q ss_pred CCCcEEEEecCCCCCCCCCCCchhHH-HHHHCCCEEEEEccCC---CCCCCh---hhhhcccccCCC-CcHhHHHH----
Q 006375 404 GSDPLLLYGYGSYEICNDPAFNSSRL-SLLDRGFIFAIAQIRG---GGELGR---QWYENGKFLKKK-NTFTDFIA---- 471 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~~~~~~~~~-~l~~~G~~v~~~~~rG---~g~~g~---~~~~~~~~~~~~-~~~~D~~~---- 471 (648)
.+.|+||++||- |... ..+..... ........++.++-+- ....|. .|.......... ...+++..
T Consensus 12 ~~~~lvi~LHG~-G~~~-~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 12 KAKPLVILLHGY-GDSE-DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp T-SEEEEEE--T-TS-H-HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCceEEEEECCC-CCCc-chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 467999999994 4332 11111111 1122367777775431 111233 776533222211 12333333
Q ss_pred ---HHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHH
Q 006375 472 ---CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEE 548 (648)
Q Consensus 472 ---~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~ 548 (648)
.++.+.+.+ ++++||++.|+|+||.+++.++.++|+.++++|+.+|.+-..... ..
T Consensus 90 l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~--------------------~~ 148 (216)
T PF02230_consen 90 LDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL--------------------ED 148 (216)
T ss_dssp HHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC--------------------HC
T ss_pred HHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc--------------------cc
Confidence 333333334 899999999999999999999999999999999999865321100 00
Q ss_pred HHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHH
Q 006375 549 FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAF 628 (648)
Q Consensus 549 ~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 628 (648)
.+ .... +.| ++++||..|++||...+++.++.|++.+.+.+...| ++.||... . +++.+
T Consensus 149 --------~~-~~~~--~~p-i~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~---~g~gH~i~---~---~~~~~ 207 (216)
T PF02230_consen 149 --------RP-EALA--KTP-ILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEY---PGGGHEIS---P---EELRD 207 (216)
T ss_dssp --------CH-CCCC--TS--EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEE---TT-SSS-----H---HHHHH
T ss_pred --------cc-cccC--CCc-EEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEc---CCCCCCCC---H---HHHHH
Confidence 00 0011 455 999999999999999999999999999876555555 37899653 2 23445
Q ss_pred HHHHHHHhc
Q 006375 629 TYTFLMRAL 637 (648)
Q Consensus 629 ~~~fl~~~l 637 (648)
..+||.+++
T Consensus 208 ~~~~l~~~~ 216 (216)
T PF02230_consen 208 LREFLEKHI 216 (216)
T ss_dssp HHHHHHHH-
T ss_pred HHHHHhhhC
Confidence 678998764
No 70
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.50 E-value=1.6e-11 Score=131.08 Aligned_cols=245 Identities=14% Similarity=0.097 Sum_probs=157.5
Q ss_pred CCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc-cCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcE
Q 006375 89 SPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDI 166 (648)
Q Consensus 89 SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~ 166 (648)
.+.+.+++|.....+....+|+++|.+++....... ......+.||||| .|+|+.... ...+|+++++.++. ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~--~~~~i~v~d~~~g~--~~ 227 (417)
T TIGR02800 152 GAFSTRIAYVSKSGKSRRYELQVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFES--GKPEIYVQDLATGQ--RE 227 (417)
T ss_pred CCcCCEEEEEEEeCCCCcceEEEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCC--CCcEEEEEECCCCC--EE
Confidence 456788999977644457899999998766554332 2234568999999 999987643 34679999998762 22
Q ss_pred EEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-ceeeeEeecCCEEEEEeccCCCCCc
Q 006375 167 CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNS 245 (648)
Q Consensus 167 ~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~ 245 (648)
.+... ......+.|+|||+.|++.....+..+||++++.++. .+.++.... .....|+|||++|+|.+++.+ ..
T Consensus 228 ~~~~~--~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g--~~ 302 (417)
T TIGR02800 228 KVASF--PGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQ-LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGG--SP 302 (417)
T ss_pred EeecC--CCCccceEECCCCCEEEEEECCCCCccEEEEECCCCC-EEECCCCCCCCCCEEECCCCCEEEEEECCCC--Cc
Confidence 23221 1223357899999999988766667899999999886 666654322 224569999999999988643 35
Q ss_pred EEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCC
Q 006375 246 ELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPS 325 (648)
Q Consensus 246 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~ 325 (648)
+|+.+++++. ..+.+...........++++++.+++.....+..++++++++. +....++. .. .....
T Consensus 303 ~iy~~d~~~~-~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~--~~~~~l~~--------~~-~~~~p 370 (417)
T TIGR02800 303 QIYMMDADGG-EVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDG--GGERVLTD--------TG-LDESP 370 (417)
T ss_pred eEEEEECCCC-CEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCC--CCeEEccC--------CC-CCCCc
Confidence 8999998763 3332443332222334455566777776666667888888873 32222221 11 11223
Q ss_pred CCcccccEEEEEEeeCCCCCEEEEEECCCC
Q 006375 326 ESVFSSRILRFHYSSLRTPPSVYDYDMDMG 355 (648)
Q Consensus 326 ~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~ 355 (648)
.+++++..+++....... ..++.++...+
T Consensus 371 ~~spdg~~l~~~~~~~~~-~~l~~~~~~g~ 399 (417)
T TIGR02800 371 SFAPNGRMILYATTRGGR-GVLGLVSTDGR 399 (417)
T ss_pred eECCCCCEEEEEEeCCCc-EEEEEEECCCc
Confidence 456778877776654433 56777665443
No 71
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.50 E-value=1.5e-12 Score=125.28 Aligned_cols=240 Identities=20% Similarity=0.199 Sum_probs=140.8
Q ss_pred EEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccc
Q 006375 380 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 459 (648)
Q Consensus 380 ~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~ 459 (648)
.+...||..+-.....++. +.+.|+||.+||--|+..++.-......+.++||.|+++|.||+++.-..- ..
T Consensus 53 ~v~~pdg~~~~ldw~~~p~----~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~----p~ 124 (345)
T COG0429 53 RLETPDGGFIDLDWSEDPR----AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTS----PR 124 (345)
T ss_pred EEEcCCCCEEEEeeccCcc----ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccC----cc
Confidence 3444566544444444332 245699999999777776663333445777889999999999988642210 01
Q ss_pred cCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCC---ceeEEEecCCcccccccc--cC------
Q 006375 460 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVDVLTTM--LD------ 528 (648)
Q Consensus 460 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~~~a~v~~~~~~d~~~~~--~~------ 528 (648)
.......+|+..+++++.+... +.++.++|.|+||.+.+..+.+..+ +-+|++..+| .|+.... ++
T Consensus 125 ~yh~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P-~Dl~~~~~~l~~~~s~~ 201 (345)
T COG0429 125 LYHSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAP-FDLEACAYRLDSGFSLR 201 (345)
T ss_pred eecccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCH-HHHHHHHHHhcCchhhh
Confidence 1111234899999999998765 5899999999999665555554332 3344444444 3432110 00
Q ss_pred ----------------------CCCCCCcc-------cccccC----CC--CCHHHHHHHHcCCccccCCCCCCCeEEEe
Q 006375 529 ----------------------PTIPLTTA-------EWEEWG----DP--WKEEFYFYMKSYSPVDNVKAQNYPHILVT 573 (648)
Q Consensus 529 ----------------------~~~~~~~~-------~~~~~g----~~--~~~~~~~~~~~~sp~~~~~~~~~P~~li~ 573 (648)
...|.... ...||- .| .-++..+|+++-|++..+.+|..| +||+
T Consensus 202 ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~P-tLii 280 (345)
T COG0429 202 LYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKP-TLII 280 (345)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccc-eEEE
Confidence 11221100 001111 11 123455677889999999999999 9999
Q ss_pred ecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCC-C--c-hHHHHHHHHHHHHHHHHhcC
Q 006375 574 AGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK-S--G-RFERLREAAFTYTFLMRALS 638 (648)
Q Consensus 574 ~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~-~--~-~~~~~~~~~~~~~fl~~~l~ 638 (648)
|+.+|+.+++..--+.-.. .+.. +.+..-..+||.+- . . +...|.+ ..+.+||...+.
T Consensus 281 ~A~DDP~~~~~~iP~~~~~---~np~---v~l~~t~~GGHvGfl~~~~~~~~~W~~-~ri~~~l~~~~~ 342 (345)
T COG0429 281 NAKDDPFMPPEVIPKLQEM---LNPN---VLLQLTEHGGHVGFLGGKLLHPQMWLE-QRILDWLDPFLE 342 (345)
T ss_pred ecCCCCCCChhhCCcchhc---CCCc---eEEEeecCCceEEeccCccccchhhHH-HHHHHHHHHHHh
Confidence 9999999986322222111 2222 33433448899432 1 1 2222332 356788877654
No 72
>PLN02872 triacylglycerol lipase
Probab=99.49 E-value=1.5e-13 Score=142.16 Aligned_cols=146 Identities=21% Similarity=0.249 Sum_probs=97.3
Q ss_pred CCCcceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCc----hhHHHHHHCCCEEEEEccCCC
Q 006375 371 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN----SSRLSLLDRGFIFAIAQIRGG 446 (648)
Q Consensus 371 ~~~~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~----~~~~~l~~~G~~v~~~~~rG~ 446 (648)
...|.+|+..+++.||..+.+.-+.+........+.|.||++||....+..+... ..+..|+++||.|.++|.||.
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccc
Confidence 3478899999999999988877554322101123458899999976555443221 233467889999999999997
Q ss_pred CC-CChhhhhc-ccc----cCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCC---ceeEEEecC
Q 006375 447 GE-LGRQWYEN-GKF----LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAV 517 (648)
Q Consensus 447 g~-~g~~~~~~-~~~----~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~~~a~v~~~ 517 (648)
+. +|...... ... .+.+....|+.++++++.+.. .+++.++|+|+||.++.+++ .+|+ +++++++.+
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~ 194 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLC 194 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhc
Confidence 63 33222111 111 111233579999999998642 36899999999999988666 4676 566767666
Q ss_pred Ccc
Q 006375 518 PFV 520 (648)
Q Consensus 518 ~~~ 520 (648)
|+.
T Consensus 195 P~~ 197 (395)
T PLN02872 195 PIS 197 (395)
T ss_pred chh
Confidence 653
No 73
>PLN00021 chlorophyllase
Probab=99.49 E-value=2.9e-12 Score=128.72 Aligned_cols=207 Identities=19% Similarity=0.203 Sum_probs=132.2
Q ss_pred eEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcH
Q 006375 387 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 466 (648)
Q Consensus 387 ~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~ 466 (648)
..+|+.++.|... ++.|+||++||+.+.. ..|......|+++||+|+++|++|.+.. .....+
T Consensus 37 ~~~p~~v~~P~~~----g~~PvVv~lHG~~~~~--~~y~~l~~~Las~G~~VvapD~~g~~~~-----------~~~~~i 99 (313)
T PLN00021 37 PPKPLLVATPSEA----GTYPVLLFLHGYLLYN--SFYSQLLQHIASHGFIVVAPQLYTLAGP-----------DGTDEI 99 (313)
T ss_pred CCceEEEEeCCCC----CCCCEEEEECCCCCCc--ccHHHHHHHHHhCCCEEEEecCCCcCCC-----------CchhhH
Confidence 4688998888653 6789999999975432 2355666788999999999998874321 112345
Q ss_pred hHHHHHHHHHHHc--------CCCCCCeEEEEeeChhHHHHHHHHhhCCC-----ceeEEEecCCcccccccccCCCCCC
Q 006375 467 TDFIACAEYLIKN--------CYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----LFKAAVAAVPFVDVLTTMLDPTIPL 533 (648)
Q Consensus 467 ~D~~~~~~~l~~~--------~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-----~~~a~v~~~~~~d~~~~~~~~~~~~ 533 (648)
+|..++++|+.+. ...|+++++++|||+||.++..++.++++ .|+++|+..|+..+.... .+
T Consensus 100 ~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~--~~--- 174 (313)
T PLN00021 100 KDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGK--QT--- 174 (313)
T ss_pred HHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccccccc--CC---
Confidence 6777788888752 23677999999999999999999988774 578888888875432110 01
Q ss_pred CcccccccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCC-----c----cCC-chHHHHHHHHHhcCCCCCeE
Q 006375 534 TTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDP-----R----VMY-SEPAKFVAKLREMKTDDNIL 603 (648)
Q Consensus 534 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~-----~----v~~-~~~~~~~~~l~~~~~~~~~~ 603 (648)
.| .. ..+.| +..++..| +||+++..|. . .|. .+.++|+++++. ++..+
T Consensus 175 ---------~p---~i----l~~~~--~s~~~~~P-~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~---~~~~~ 232 (313)
T PLN00021 175 ---------PP---PV----LTYAP--HSFNLDIP-VLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA---PAVHF 232 (313)
T ss_pred ---------CC---cc----cccCc--ccccCCCC-eEEEecCCCcccccccccccCCCCCCHHHHHHhcCC---Ceeee
Confidence 11 00 11111 11224677 9999888763 2 223 344788877654 33334
Q ss_pred EEEecCCCCccCCCch-------------------HHHHHH--HHHHHHHHHHhcCCC
Q 006375 604 LFKCELGAGHFSKSGR-------------------FERLRE--AAFTYTFLMRALSML 640 (648)
Q Consensus 604 ~~~~~~~~gH~~~~~~-------------------~~~~~~--~~~~~~fl~~~l~~~ 640 (648)
+.+ ++||+...+. .+..++ ...+.+||..+|...
T Consensus 233 ~~~---~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 233 VAK---DYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred eec---CCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 444 7888543111 111222 234689999998654
No 74
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.49 E-value=1e-12 Score=124.18 Aligned_cols=129 Identities=20% Similarity=0.251 Sum_probs=101.3
Q ss_pred CCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHC-CCEEEEEccCCCCCCChhhhhcccccC-
Q 006375 384 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLK- 461 (648)
Q Consensus 384 ~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~rG~g~~g~~~~~~~~~~~- 461 (648)
.+|.+-+.+|+.|+.. +.+.|+||++||+.++.........+..++++ ||.|++|| ++.+.|...+...+
T Consensus 42 ~~g~~r~y~l~vP~g~---~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPd-----g~~~~wn~~~~~~~~ 113 (312)
T COG3509 42 VNGLKRSYRLYVPPGL---PSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPD-----GYDRAWNANGCGNWF 113 (312)
T ss_pred cCCCccceEEEcCCCC---CCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcC-----ccccccCCCcccccC
Confidence 3566788898888875 33459999999987765443333345667775 99999994 66677755544444
Q ss_pred -------CCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 006375 462 -------KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 520 (648)
Q Consensus 462 -------~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~ 520 (648)
...++..+.+.++.|+.+..+||.||+|.|.|+||.|+.+++..+|++|+|+...++..
T Consensus 114 ~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 114 GPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 23467788889999999999999999999999999999999999999999998888765
No 75
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.47 E-value=1.1e-12 Score=132.93 Aligned_cols=214 Identities=16% Similarity=0.151 Sum_probs=127.1
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCC
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 485 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 485 (648)
.|.||++||..++.. .|...+..|.++ |.|+++|.||.|.....-.. .........++|+...+..+++.-. .+
T Consensus 29 ~~~vlllHG~~~~~~--~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~-~~~~~~~~~~~~~a~~l~~~l~~l~--~~ 102 (294)
T PLN02824 29 GPALVLVHGFGGNAD--HWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPR-SAPPNSFYTFETWGEQLNDFCSDVV--GD 102 (294)
T ss_pred CCeEEEECCCCCChh--HHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccc-cccccccCCHHHHHHHHHHHHHHhc--CC
Confidence 478999999655443 466666777765 69999999999865431000 0000123456777766666554422 27
Q ss_pred eEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccc----------------cCCCCC--------CCc---ccc
Q 006375 486 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM----------------LDPTIP--------LTT---AEW 538 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~----------------~~~~~~--------~~~---~~~ 538 (648)
++.++|+||||.+++.++.++|++++++|+.+|........ +..... ... ...
T Consensus 103 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (294)
T PLN02824 103 PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNI 182 (294)
T ss_pred CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHH
Confidence 89999999999999999999999999999987643211000 000000 000 000
Q ss_pred --cccCCC--CCHHHHH----------------HHHcCC----ccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHH
Q 006375 539 --EEWGDP--WKEEFYF----------------YMKSYS----PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLR 594 (648)
Q Consensus 539 --~~~g~~--~~~~~~~----------------~~~~~s----p~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~ 594 (648)
..|+++ ..++..+ .+..+. ....+.++++| +|+++|++|..+|...++++.+.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lvi~G~~D~~~~~~~~~~~~~~~- 260 (294)
T PLN02824 183 LCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCP-VLIAWGEKDPWEPVELGRAYANFD- 260 (294)
T ss_pred HHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCC-eEEEEecCCCCCChHHHHHHHhcC-
Confidence 012211 0111111 111111 12335667898 999999999999987776643322
Q ss_pred hcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHH
Q 006375 595 EMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 635 (648)
Q Consensus 595 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 635 (648)
...++++++ ++||....++.+.+.. .+.+||.+
T Consensus 261 ---~~~~~~~i~---~~gH~~~~e~p~~~~~--~i~~fl~~ 293 (294)
T PLN02824 261 ---AVEDFIVLP---GVGHCPQDEAPELVNP--LIESFVAR 293 (294)
T ss_pred ---CccceEEeC---CCCCChhhhCHHHHHH--HHHHHHhc
Confidence 224556665 8999877666654443 45777765
No 76
>PRK11071 esterase YqiA; Provisional
Probab=99.47 E-value=9.2e-13 Score=123.11 Aligned_cols=171 Identities=15% Similarity=0.076 Sum_probs=103.7
Q ss_pred cEEEEecCCCCCCCCCCCchhHHHHHH--CCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCC
Q 006375 407 PLLLYGYGSYEICNDPAFNSSRLSLLD--RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 484 (648)
Q Consensus 407 P~vl~~hGg~~~~~~~~~~~~~~~l~~--~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 484 (648)
|.||++||-.++...+........+.+ .+|.|+.+|.||.+ ++..+.++.++++.. .
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~~~--~ 60 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------------ADAAELLESLVLEHG--G 60 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------------HHHHHHHHHHHHHcC--C
Confidence 789999995444332211112233444 37999999999742 245556666665432 3
Q ss_pred CeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHHHHHHHHcCCccccCCC
Q 006375 485 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKA 564 (648)
Q Consensus 485 ~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~ 564 (648)
+++.++|+|+||++++.++.++|. + +|+.+|..+....... ........+..-.-+...+..+.++++.+.. +.
T Consensus 61 ~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-i~- 134 (190)
T PRK11071 61 DPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFELLTD-YLGENENPYTGQQYVLESRHIYDLKVMQIDP-LE- 134 (190)
T ss_pred CCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHHHHHH-hcCCcccccCCCcEEEcHHHHHHHHhcCCcc-CC-
Confidence 689999999999999999999883 3 4667776664322210 0000000000000112334444445554433 33
Q ss_pred CCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccC
Q 006375 565 QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 615 (648)
Q Consensus 565 ~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~ 615 (648)
...| ++|+||++|..||+.++.+++++. +.++++ +++|..
T Consensus 135 ~~~~-v~iihg~~De~V~~~~a~~~~~~~-------~~~~~~---ggdH~f 174 (190)
T PRK11071 135 SPDL-IWLLQQTGDEVLDYRQAVAYYAAC-------RQTVEE---GGNHAF 174 (190)
T ss_pred Chhh-EEEEEeCCCCcCCHHHHHHHHHhc-------ceEEEC---CCCcch
Confidence 3455 899999999999999999999853 234443 899976
No 77
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.46 E-value=1.5e-12 Score=130.50 Aligned_cols=206 Identities=17% Similarity=0.206 Sum_probs=122.9
Q ss_pred cEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCe
Q 006375 407 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 486 (648)
Q Consensus 407 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~ 486 (648)
|.||++||..+... .|...+..| .++|.|+++|+||.|..... .....++++.+.++.+++. .+.++
T Consensus 26 ~plvllHG~~~~~~--~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~--------~~~~~~~~~~~~~~~~i~~--l~~~~ 92 (276)
T TIGR02240 26 TPLLIFNGIGANLE--LVFPFIEAL-DPDLEVIAFDVPGVGGSSTP--------RHPYRFPGLAKLAARMLDY--LDYGQ 92 (276)
T ss_pred CcEEEEeCCCcchH--HHHHHHHHh-ccCceEEEECCCCCCCCCCC--------CCcCcHHHHHHHHHHHHHH--hCcCc
Confidence 67899999544433 345444454 45799999999998865321 1123455655555555544 23468
Q ss_pred EEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccc---------cccCCCC---CCCcccc--cccC-----CCCCH
Q 006375 487 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT---------TMLDPTI---PLTTAEW--EEWG-----DPWKE 547 (648)
Q Consensus 487 i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~---------~~~~~~~---~~~~~~~--~~~g-----~~~~~ 547 (648)
+.++|+||||.+++.++.++|++++++|+.++...... ....... +...... ..++ ++...
T Consensus 93 ~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (276)
T TIGR02240 93 VNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELA 172 (276)
T ss_pred eEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccchhh
Confidence 99999999999999999999999999999887643110 0000000 0000000 0000 01000
Q ss_pred --------------HHHHHHH--cCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCC
Q 006375 548 --------------EFYFYMK--SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 611 (648)
Q Consensus 548 --------------~~~~~~~--~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 611 (648)
.....+. .......++++++| +|+++|++|+.+|+.++.++.+.+.. .+++++. +
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~v~~~~~~~l~~~~~~----~~~~~i~---~- 243 (276)
T TIGR02240 173 MAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQP-TLVLAGDDDPIIPLINMRLLAWRIPN----AELHIID---D- 243 (276)
T ss_pred hhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCC-EEEEEeCCCCcCCHHHHHHHHHhCCC----CEEEEEc---C-
Confidence 0001011 11122345677898 99999999999999888888776642 3445552 3
Q ss_pred CccCCCchHHHHHHHHHHHHHHHHh
Q 006375 612 GHFSKSGRFERLREAAFTYTFLMRA 636 (648)
Q Consensus 612 gH~~~~~~~~~~~~~~~~~~fl~~~ 636 (648)
||+...+..+.+.+ .+.+|+.+.
T Consensus 244 gH~~~~e~p~~~~~--~i~~fl~~~ 266 (276)
T TIGR02240 244 GHLFLITRAEAVAP--IIMKFLAEE 266 (276)
T ss_pred CCchhhccHHHHHH--HHHHHHHHh
Confidence 99876665554444 456777764
No 78
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.46 E-value=3.3e-12 Score=132.93 Aligned_cols=161 Identities=19% Similarity=0.228 Sum_probs=118.2
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 161 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~ 161 (648)
..|+|||||++|||...++| ..+||++|+.++..... ...++...+.|+||| +|+|++.. .+++ +||++++++.
T Consensus 241 ~~P~fspDG~~l~f~~~rdg--~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr-~G~p-~I~~~~~~g~ 316 (425)
T COG0823 241 GAPAFSPDGSKLAFSSSRDG--SPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDR-GGRP-QIYLYDLEGS 316 (425)
T ss_pred CCccCCCCCCEEEEEECCCC--CccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCC-CCCc-ceEEECCCCC
Confidence 36899999999999999887 69999999999885442 345556689999999 99999653 3444 7999999987
Q ss_pred CCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEEeccCC
Q 006375 162 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDE 241 (648)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~ 241 (648)
+. ..+.+ ...... .+.|||||++|++.+...+..++...|+.++..++.++.........|+++|+.+.|.++..
T Consensus 317 ~~-~riT~--~~~~~~-~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~~s~~~- 391 (425)
T COG0823 317 QV-TRLTF--SGGGNS-NPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMFSSGQG- 391 (425)
T ss_pred ce-eEeec--cCCCCc-CccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCceEEEeccCC-
Confidence 44 22222 222222 67899999999998754444778888887664356666555555567999999999998863
Q ss_pred CCCcEEEEEeCCC
Q 006375 242 LFNSELLACPVDN 254 (648)
Q Consensus 242 ~~~~~l~~~~~~~ 254 (648)
....|..++..+
T Consensus 392 -~~~~l~~~s~~g 403 (425)
T COG0823 392 -GGSVLSLVSLDG 403 (425)
T ss_pred -CCceEEEeeccc
Confidence 345666666544
No 79
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.45 E-value=2.3e-12 Score=129.65 Aligned_cols=108 Identities=17% Similarity=0.089 Sum_probs=74.8
Q ss_pred CCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCC
Q 006375 405 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 484 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 484 (648)
+.|.||++||+++.... .+......+.+.||.|+.+|.||.|...... ......+++++.+.+..+++.- +.
T Consensus 24 ~~~~vl~~hG~~g~~~~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~ 95 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHE-YLENLRELLKEEGREVIMYDQLGCGYSDQPD-----DSDELWTIDYFVDELEEVREKL--GL 95 (288)
T ss_pred CCCeEEEEcCCCCccHH-HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCC-----cccccccHHHHHHHHHHHHHHc--CC
Confidence 35789999998776532 1232223334449999999999987642110 0011245677777666666543 34
Q ss_pred CeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 006375 485 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 520 (648)
Q Consensus 485 ~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~ 520 (648)
.++.++|+|+||.++..++.++|+.++++|+..++.
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 679999999999999999999999999999877643
No 80
>PLN02965 Probable pheophorbidase
Probab=99.45 E-value=5.1e-12 Score=125.05 Aligned_cols=198 Identities=15% Similarity=0.140 Sum_probs=119.4
Q ss_pred EEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCC-Ce
Q 006375 408 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK-EK 486 (648)
Q Consensus 408 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~-~~ 486 (648)
+||++||..... ..|...+..|.++||.|+++|+||.|..... .....+++++.+.+..+++. .+. ++
T Consensus 5 ~vvllHG~~~~~--~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~--l~~~~~ 73 (255)
T PLN02965 5 HFVFVHGASHGA--WCWYKLATLLDAAGFKSTCVDLTGAGISLTD-------SNTVSSSDQYNRPLFALLSD--LPPDHK 73 (255)
T ss_pred EEEEECCCCCCc--CcHHHHHHHHhhCCceEEEecCCcCCCCCCC-------ccccCCHHHHHHHHHHHHHh--cCCCCC
Confidence 599999966443 3466666777788999999999999865321 11124456666655555544 222 58
Q ss_pred EEEEeeChhHHHHHHHHhhCCCceeEEEecCCcc---ccc--ccc---cC-----------C--CCCCC----cccc-cc
Q 006375 487 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV---DVL--TTM---LD-----------P--TIPLT----TAEW-EE 540 (648)
Q Consensus 487 i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~---d~~--~~~---~~-----------~--~~~~~----~~~~-~~ 540 (648)
+.++|+||||.++..++.++|++++++|+.++.. +.. ... .. . ..+.. ..++ ..
T Consensus 74 ~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
T PLN02965 74 VILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRH 153 (255)
T ss_pred EEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHH
Confidence 9999999999999999999999999988876541 100 000 00 0 00000 0000 00
Q ss_pred --cCCCCCHHHHHHH-HcCCc--c----------ccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEE
Q 006375 541 --WGDPWKEEFYFYM-KSYSP--V----------DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLF 605 (648)
Q Consensus 541 --~g~~~~~~~~~~~-~~~sp--~----------~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 605 (648)
+... ..+..... ....+ . ..+.++++| +|+++|++|..+|+..++.+.+.+... +++++
T Consensus 154 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP-~lvi~g~~D~~~~~~~~~~~~~~~~~a----~~~~i 227 (255)
T PLN02965 154 YYYNQS-PLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVP-RVYIKTAKDNLFDPVRQDVMVENWPPA----QTYVL 227 (255)
T ss_pred HHhcCC-CHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCC-EEEEEcCCCCCCCHHHHHHHHHhCCcc----eEEEe
Confidence 0110 11100000 00000 0 123357888 999999999999998887777666532 34555
Q ss_pred EecCCCCccCCCchHHHHHH
Q 006375 606 KCELGAGHFSKSGRFERLRE 625 (648)
Q Consensus 606 ~~~~~~gH~~~~~~~~~~~~ 625 (648)
. ++||....++++.+..
T Consensus 228 ~---~~GH~~~~e~p~~v~~ 244 (255)
T PLN02965 228 E---DSDHSAFFSVPTTLFQ 244 (255)
T ss_pred c---CCCCchhhcCHHHHHH
Confidence 4 8999887776665554
No 81
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.45 E-value=3.8e-12 Score=127.64 Aligned_cols=206 Identities=17% Similarity=0.183 Sum_probs=121.7
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCC
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 485 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 485 (648)
.|+||++||..+... .|......|. ++|.|+++|+||.|...... .....++++.+.+..+++.- +.+
T Consensus 28 ~~~vv~~hG~~~~~~--~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~i~~~--~~~ 95 (278)
T TIGR03056 28 GPLLLLLHGTGASTH--SWRDLMPPLA-RSFRVVAPDLPGHGFTRAPF-------RFRFTLPSMAEDLSALCAAE--GLS 95 (278)
T ss_pred CCeEEEEcCCCCCHH--HHHHHHHHHh-hCcEEEeecCCCCCCCCCcc-------ccCCCHHHHHHHHHHHHHHc--CCC
Confidence 589999999655432 3444444554 57999999999988643221 11245677777777666542 236
Q ss_pred eEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCC----------CCCCc----------ccccc----c
Q 006375 486 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPT----------IPLTT----------AEWEE----W 541 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~----------~~~~~----------~~~~~----~ 541 (648)
++.++|+|+||.+++.++.++|++++++|+.++..+......... .+... ..+.. .
T Consensus 96 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (278)
T TIGR03056 96 PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDT 175 (278)
T ss_pred CceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhcc
Confidence 789999999999999999999998888888776543211100000 00000 00000 0
Q ss_pred CCCCCHH---HH--------------HHHHcCCc---cccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCC
Q 006375 542 GDPWKEE---FY--------------FYMKSYSP---VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDN 601 (648)
Q Consensus 542 g~~~~~~---~~--------------~~~~~~sp---~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~ 601 (648)
+...++. .+ ..+..++. ...++++++| +|+++|++|..||...++++.+.+.. .+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~lii~g~~D~~vp~~~~~~~~~~~~~----~~ 250 (278)
T TIGR03056 176 GSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIP-LHLIAGEEDKAVPPDESKRAATRVPT----AT 250 (278)
T ss_pred ccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCC-EEEEEeCCCcccCHHHHHHHHHhccC----Ce
Confidence 0000000 00 11111111 1235567888 99999999999998887777665542 34
Q ss_pred eEEEEecCCCCccCCCchHHHHHHHHHHHHHH
Q 006375 602 ILLFKCELGAGHFSKSGRFERLREAAFTYTFL 633 (648)
Q Consensus 602 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 633 (648)
.+.++ ++||+......+.+.+ .+.+||
T Consensus 251 ~~~~~---~~gH~~~~e~p~~~~~--~i~~f~ 277 (278)
T TIGR03056 251 LHVVP---GGGHLVHEEQADGVVG--LILQAA 277 (278)
T ss_pred EEEEC---CCCCcccccCHHHHHH--HHHHHh
Confidence 45554 8899876555443333 345554
No 82
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.44 E-value=7.8e-13 Score=129.94 Aligned_cols=199 Identities=18% Similarity=0.209 Sum_probs=118.5
Q ss_pred CCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCC
Q 006375 405 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 484 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 484 (648)
..|+||++||..... ..|......| .+||.|+++|+||.|..... .....++++.+.+..+++.- +.
T Consensus 12 ~~~~li~~hg~~~~~--~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~i~~~--~~ 78 (251)
T TIGR02427 12 GAPVLVFINSLGTDL--RMWDPVLPAL-TPDFRVLRYDKRGHGLSDAP--------EGPYSIEDLADDVLALLDHL--GI 78 (251)
T ss_pred CCCeEEEEcCcccch--hhHHHHHHHh-hcccEEEEecCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHh--CC
Confidence 468999999953332 2344444444 57999999999998865321 12245677776666666542 34
Q ss_pred CeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccc--c-------cCCCCC-CC---cccc--cccCCCCCH--
Q 006375 485 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT--M-------LDPTIP-LT---TAEW--EEWGDPWKE-- 547 (648)
Q Consensus 485 ~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~--~-------~~~~~~-~~---~~~~--~~~g~~~~~-- 547 (648)
+++.++|+|+||.++..++.++|+.++++|+.++...+... . ...... .. ...+ ..+..+...
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARL 158 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHH
Confidence 68999999999999999999999999988877654321110 0 000000 00 0000 011111000
Q ss_pred HHH----------------HHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCC
Q 006375 548 EFY----------------FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 611 (648)
Q Consensus 548 ~~~----------------~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 611 (648)
+.+ ..+...+....+.++++| +|+++|++|..+|.....++.+.+. ..+.++++ ++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-vlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~---~~ 230 (251)
T TIGR02427 159 DLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVP-TLCIAGDQDGSTPPELVREIADLVP----GARFAEIR---GA 230 (251)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCC-eEEEEeccCCcCChHHHHHHHHhCC----CceEEEEC---CC
Confidence 000 011112223445667888 9999999999999987777766654 23445554 78
Q ss_pred CccCCCchHHHHH
Q 006375 612 GHFSKSGRFERLR 624 (648)
Q Consensus 612 gH~~~~~~~~~~~ 624 (648)
||.......+.+.
T Consensus 231 gH~~~~~~p~~~~ 243 (251)
T TIGR02427 231 GHIPCVEQPEAFN 243 (251)
T ss_pred CCcccccChHHHH
Confidence 9976655554443
No 83
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.44 E-value=2.4e-12 Score=113.44 Aligned_cols=198 Identities=18% Similarity=0.165 Sum_probs=124.5
Q ss_pred EEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCC---CCchhHHHHHHCCCEEEEEccCCCCCCChhh
Q 006375 377 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP---AFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 453 (648)
Q Consensus 377 ~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~---~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~ 453 (648)
.++.++..-|. +.+. +.|.+ ....|+.|.+|--+....+. --...+..|.++||+++.+|+||-|..+..|
T Consensus 5 ~~v~i~Gp~G~-le~~-~~~~~----~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f 78 (210)
T COG2945 5 PTVIINGPAGR-LEGR-YEPAK----TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF 78 (210)
T ss_pred CcEEecCCccc-ceec-cCCCC----CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc
Confidence 44555555554 5554 22322 24467777777533222222 1223346788899999999999988765544
Q ss_pred hhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCC
Q 006375 454 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPL 533 (648)
Q Consensus 454 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~ 533 (648)
.++....+|..+|++|++++.. +..-..+.|.|.|+++++.++.+.|+ ....++..|..+...+
T Consensus 79 ------D~GiGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~df-------- 142 (210)
T COG2945 79 ------DNGIGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAYDF-------- 142 (210)
T ss_pred ------cCCcchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCchhh--------
Confidence 4555677999999999998753 33345889999999999999999886 3445555554441110
Q ss_pred CcccccccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCc
Q 006375 534 TTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 613 (648)
Q Consensus 534 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH 613 (648)
+- +..... |.|+++|+.|++|++....++.+. .+.+.+++. ++.|
T Consensus 143 -----------------------s~---l~P~P~-~~lvi~g~~Ddvv~l~~~l~~~~~-----~~~~~i~i~---~a~H 187 (210)
T COG2945 143 -----------------------SF---LAPCPS-PGLVIQGDADDVVDLVAVLKWQES-----IKITVITIP---GADH 187 (210)
T ss_pred -----------------------hh---ccCCCC-CceeEecChhhhhcHHHHHHhhcC-----CCCceEEec---CCCc
Confidence 00 111123 499999999999887766666544 334445554 8999
Q ss_pred cCCCchHHHHHHHHHHHHHHH
Q 006375 614 FSKSGRFERLREAAFTYTFLM 634 (648)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~fl~ 634 (648)
++...... +.+ .+.+||.
T Consensus 188 FF~gKl~~-l~~--~i~~~l~ 205 (210)
T COG2945 188 FFHGKLIE-LRD--TIADFLE 205 (210)
T ss_pred eecccHHH-HHH--HHHHHhh
Confidence 87543222 222 3467773
No 84
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.43 E-value=8.5e-12 Score=129.14 Aligned_cols=243 Identities=20% Similarity=0.202 Sum_probs=149.7
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC-------------------ccceeEEecCC-eEEEE
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-------------------VTASVEWAGNE-ALVYI 142 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~-------------------~~~~~~WspDg-~l~y~ 142 (648)
+..+.|||||++|||..+ .+||++++.+++.+..+..+ ....+.||||| +|+|.
T Consensus 45 ~~~~~~sP~g~~~~~v~~------~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~ 118 (353)
T PF00930_consen 45 LQDAKWSPDGKYIAFVRD------NNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFL 118 (353)
T ss_dssp BSEEEE-SSSTEEEEEET------TEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEE
T ss_pred cccceeecCCCeeEEEec------CceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEE
Confidence 357899999999999985 38999999888766433222 23558899999 99999
Q ss_pred EeCCCC-------------------------------CCceEEEEECCCCCCCcEEEEe---ecCCCeEEEEEeCCCCcE
Q 006375 143 TMDEIL-------------------------------RPDKAWLHKLEADQSNDICLYH---EKDDIYSLGLQASESKKF 188 (648)
Q Consensus 143 ~~~~~~-------------------------------~~~~l~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~s~Dg~~ 188 (648)
+.|+.. ...+|+.+++.++... .+... .....+...+.|++|++.
T Consensus 119 ~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~-~~~~~~~~~~~~~yl~~v~W~~d~~~ 197 (353)
T PF00930_consen 119 RFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTT-ELDPPNSLNPQDYYLTRVGWSPDGKR 197 (353)
T ss_dssp EEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCC-EE---HHHHTSSEEEEEEEEEETTEE
T ss_pred EECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEE-EeeeccccCCCccCcccceecCCCcE
Confidence 987521 0124666677665322 21111 123456678899999996
Q ss_pred EEEEEccc--cccEEEEEECCCCCceeEeeecc--ccee----eeEe-ecCCEEEEEeccCCCCCcEEEEEeCCCCCcce
Q 006375 189 LFIASESK--ITRFVFYLDVSKPEELRVLTPRV--VGVD----TAAS-HRGNHFFITRRSDELFNSELLACPVDNTSETT 259 (648)
Q Consensus 189 l~~~~~~~--~~~~l~~~dl~~~~~~~~l~~~~--~~~~----~~~s-~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 259 (648)
|++...++ ....++++|..++. .+.+.... ..+. ..+. +++..+++.+.+++ ..+|+.++.++ +..+
T Consensus 198 l~~~~~nR~q~~~~l~~~d~~tg~-~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G--~~hly~~~~~~-~~~~ 273 (353)
T PF00930_consen 198 LWVQWLNRDQNRLDLVLCDASTGE-TRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDG--YRHLYLYDLDG-GKPR 273 (353)
T ss_dssp EEEEEEETTSTEEEEEEEEECTTT-CEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTS--SEEEEEEETTS-SEEE
T ss_pred EEEEEcccCCCEEEEEEEECCCCc-eeEEEEecCCcceeeecccccccCCCCEEEEEEEcCC--CcEEEEEcccc-ccee
Confidence 66654433 34788899998876 44433221 1221 2243 78888888887643 57999999987 4444
Q ss_pred eEecCCCCc-ccceEEEeCCEEEEEEecCC--eeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCCCcccccEEEE
Q 006375 260 VLIPHRESV-KLQDIQLFIDHLAVYEREGG--LQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRF 336 (648)
Q Consensus 260 ~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~--~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~ 336 (648)
.++.....+ .+..++..++.+++....+. ..+|+.++++ .++.+++||...... ++ ...+++++.+..
T Consensus 274 ~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~-~~~~~~~LT~~~~~~-----~~---~~~Spdg~y~v~ 344 (353)
T PF00930_consen 274 QLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLD-SGGEPKCLTCEDGDH-----YS---ASFSPDGKYYVD 344 (353)
T ss_dssp ESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETT-ETTEEEESSTTSSTT-----EE---EEE-TTSSEEEE
T ss_pred ccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeC-CCCCeEeccCCCCCc-----eE---EEECCCCCEEEE
Confidence 455444333 34455555678888877644 4466666665 145555555332111 12 345678899999
Q ss_pred EEeeCCCCC
Q 006375 337 HYSSLRTPP 345 (648)
Q Consensus 337 ~~ss~~~P~ 345 (648)
.++++..|+
T Consensus 345 ~~s~~~~P~ 353 (353)
T PF00930_consen 345 TYSGPDTPP 353 (353)
T ss_dssp EEESSSSCE
T ss_pred EEcCCCCCC
Confidence 999999985
No 85
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.43 E-value=8.4e-12 Score=126.44 Aligned_cols=101 Identities=13% Similarity=0.087 Sum_probs=73.9
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCC
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 485 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 485 (648)
.|.||++||.+++.. .|...+..|++++ .|+++|.||.|.....- ....+++..+.+..+++.- ..+
T Consensus 27 g~~vvllHG~~~~~~--~w~~~~~~L~~~~-~via~D~~G~G~S~~~~--------~~~~~~~~a~dl~~ll~~l--~~~ 93 (295)
T PRK03592 27 GDPIVFLHGNPTSSY--LWRNIIPHLAGLG-RCLAPDLIGMGASDKPD--------IDYTFADHARYLDAWFDAL--GLD 93 (295)
T ss_pred CCEEEEECCCCCCHH--HHHHHHHHHhhCC-EEEEEcCCCCCCCCCCC--------CCCCHHHHHHHHHHHHHHh--CCC
Confidence 478999999765543 3555667777765 99999999998764321 1134455554444444432 236
Q ss_pred eEEEEeeChhHHHHHHHHhhCCCceeEEEecCCc
Q 006375 486 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 519 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~ 519 (648)
++.++|+|+||.+++.++.++|++++++|+.++.
T Consensus 94 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 127 (295)
T PRK03592 94 DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAI 127 (295)
T ss_pred CeEEEEECHHHHHHHHHHHhChhheeEEEEECCC
Confidence 8999999999999999999999999999988863
No 86
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.42 E-value=2.4e-12 Score=127.45 Aligned_cols=208 Identities=15% Similarity=0.146 Sum_probs=117.3
Q ss_pred CCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCC
Q 006375 404 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 483 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 483 (648)
+..|.||++||.++... .|......|. .+|.|+.+|.||.|..... ...+++++.+-+..+++. ..
T Consensus 14 ~~~~~iv~lhG~~~~~~--~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~---------~~~~~~~~~~d~~~~l~~--l~ 79 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLD--NLGVLARDLV-NDHDIIQVDMRNHGLSPRD---------PVMNYPAMAQDLLDTLDA--LQ 79 (255)
T ss_pred CCCCCEEEECCCCCchh--HHHHHHHHHh-hCCeEEEECCCCCCCCCCC---------CCCCHHHHHHHHHHHHHH--cC
Confidence 45689999999766543 3444444544 5799999999998865421 112344444333333332 23
Q ss_pred CCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCC-cccccc-----------cccCCCCCCC------------cccc-
Q 006375 484 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP-FVDVLT-----------TMLDPTIPLT------------TAEW- 538 (648)
Q Consensus 484 ~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~-~~d~~~-----------~~~~~~~~~~------------~~~~- 538 (648)
.+++.++|+|+||.++..++.++|++++++|+..+ ..+... .......... ...+
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (255)
T PRK10673 80 IEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVI 159 (255)
T ss_pred CCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHH
Confidence 46799999999999999999999999999887632 111100 0000000000 0000
Q ss_pred ----cccCCC----CCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCC
Q 006375 539 ----EEWGDP----WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 610 (648)
Q Consensus 539 ----~~~g~~----~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 610 (648)
..+... ..+..+..+.....+..+.++++| +|+++|++|..|+...++.+.+.+. ..++++++ +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~---~ 231 (255)
T PRK10673 160 QFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHP-ALFIRGGNSPYVTEAYRDDLLAQFP----QARAHVIA---G 231 (255)
T ss_pred HHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCC-eEEEECCCCCCCCHHHHHHHHHhCC----CcEEEEeC---C
Confidence 000000 000011111112222334556788 9999999999998766666655443 33455565 8
Q ss_pred CCccCCCchHHHHHHHHHHHHHHHH
Q 006375 611 AGHFSKSGRFERLREAAFTYTFLMR 635 (648)
Q Consensus 611 ~gH~~~~~~~~~~~~~~~~~~fl~~ 635 (648)
+||.......+.+.+ .+..||.+
T Consensus 232 ~gH~~~~~~p~~~~~--~l~~fl~~ 254 (255)
T PRK10673 232 AGHWVHAEKPDAVLR--AIRRYLND 254 (255)
T ss_pred CCCeeeccCHHHHHH--HHHHHHhc
Confidence 999776555543333 34567654
No 87
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.42 E-value=6.8e-12 Score=125.09 Aligned_cols=131 Identities=14% Similarity=0.026 Sum_probs=91.2
Q ss_pred EEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCC--CCchhHHHHHHCCCEEEEEccCCCCCCChhhh
Q 006375 377 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP--AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 454 (648)
Q Consensus 377 ~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~--~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~ 454 (648)
+.+.+. .+|..+.+.+..|.+. +.|.||++|||....... .+...+..|+++||.|+++|+||.|......
T Consensus 3 ~~~~~~-~~~~~l~g~~~~p~~~-----~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~- 75 (274)
T TIGR03100 3 RALTFS-CEGETLVGVLHIPGAS-----HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN- 75 (274)
T ss_pred eeEEEE-cCCcEEEEEEEcCCCC-----CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-
Confidence 345555 4567799988887542 235677778765433221 2334457888899999999999988653211
Q ss_pred hcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccc
Q 006375 455 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 521 (648)
Q Consensus 455 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d 521 (648)
.......+|+.++++++.++. ..-++|.++|+|+||++++.++.. +..++++|+.+|++.
T Consensus 76 -----~~~~~~~~d~~~~~~~l~~~~-~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 76 -----LGFEGIDADIAAAIDAFREAA-PHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred -----CCHHHHHHHHHHHHHHHHhhC-CCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 111234589999999998652 122679999999999998888764 467999999998754
No 88
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.42 E-value=3.5e-12 Score=132.46 Aligned_cols=212 Identities=16% Similarity=0.214 Sum_probs=122.2
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCC
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 485 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 485 (648)
.|.||++||..+... .|...+..|. .+|.|+.+|+||.|..... ......++++.+.+..+++. ...+
T Consensus 88 gp~lvllHG~~~~~~--~w~~~~~~L~-~~~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~~l~~~l~~--l~~~ 155 (360)
T PLN02679 88 GPPVLLVHGFGASIP--HWRRNIGVLA-KNYTVYAIDLLGFGASDKP-------PGFSYTMETWAELILDFLEE--VVQK 155 (360)
T ss_pred CCeEEEECCCCCCHH--HHHHHHHHHh-cCCEEEEECCCCCCCCCCC-------CCccccHHHHHHHHHHHHHH--hcCC
Confidence 378999999654432 3555555554 5899999999998865321 00123445555544444433 2236
Q ss_pred eEEEEeeChhHHHHHHHHh-hCCCceeEEEecCCccccccc------ccC---CC---------CCCCc---------cc
Q 006375 486 KLCIEGRSAGGLLIGAVLN-MRPDLFKAAVAAVPFVDVLTT------MLD---PT---------IPLTT---------AE 537 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~-~~p~~~~a~v~~~~~~d~~~~------~~~---~~---------~~~~~---------~~ 537 (648)
++.++|+|+||.++..++. .+|++++++|+..+....... ... +. .+... ..
T Consensus 156 ~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (360)
T PLN02679 156 PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRD 235 (360)
T ss_pred CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHH
Confidence 8999999999999888776 469999999988764311000 000 00 00000 00
Q ss_pred -c-----cccCCCC--CHHH----------------HHHHHc----CCccccCCCCCCCeEEEeecCCCCccCCchH-HH
Q 006375 538 -W-----EEWGDPW--KEEF----------------YFYMKS----YSPVDNVKAQNYPHILVTAGLNDPRVMYSEP-AK 588 (648)
Q Consensus 538 -~-----~~~g~~~--~~~~----------------~~~~~~----~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~-~~ 588 (648)
. ..++++. .++. +..+.. .+....+.++++| +||++|++|..+|+..+ .+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-tLii~G~~D~~~p~~~~~~~ 314 (360)
T PLN02679 236 NLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLP-ILVLWGDQDPFTPLDGPVGK 314 (360)
T ss_pred HHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCC-EEEEEeCCCCCcCchhhHHH
Confidence 0 0011110 1111 111111 1112345667898 99999999999998743 34
Q ss_pred HHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHH
Q 006375 589 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 635 (648)
Q Consensus 589 ~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 635 (648)
+++++.+.-...++++++ ++||+...++++.+.+ .+.+||.+
T Consensus 315 ~~~~l~~~ip~~~l~~i~---~aGH~~~~E~Pe~~~~--~I~~FL~~ 356 (360)
T PLN02679 315 YFSSLPSQLPNVTLYVLE---GVGHCPHDDRPDLVHE--KLLPWLAQ 356 (360)
T ss_pred HHHhhhccCCceEEEEcC---CCCCCccccCHHHHHH--HHHHHHHh
Confidence 555565433345556665 8999887776665554 56788864
No 89
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.42 E-value=1.9e-11 Score=122.38 Aligned_cols=199 Identities=20% Similarity=0.192 Sum_probs=130.1
Q ss_pred ceEEEEEeCCCCeEEeEEEEEeeCccc--cCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChh
Q 006375 375 FTERKWASASDGTQIPICIVYRKNLVK--LDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 452 (648)
Q Consensus 375 ~~~~~~~~s~~g~~i~~~l~~~~~~~~--~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~ 452 (648)
.-++..++.+||..+-.-++.+.+... ..+..|+||++||-.|.+.+..-........++||.+++.|.||.++.--.
T Consensus 92 ~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~Lt 171 (409)
T KOG1838|consen 92 EYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLT 171 (409)
T ss_pred cceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccC
Confidence 345566667788778877675554311 134679999999987777664333334455667999999999996653111
Q ss_pred hhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCC---ceeEEEecCCccccc---ccc
Q 006375 453 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVDVL---TTM 526 (648)
Q Consensus 453 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~~~a~v~~~~~~d~~---~~~ 526 (648)
.. +.--...-+|+.++++++.++..- .++.++|.||||.+....+.+..+ +.+|+++.+|+ |.+ +.+
T Consensus 172 Tp----r~f~ag~t~Dl~~~v~~i~~~~P~--a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw-d~~~~~~~~ 244 (409)
T KOG1838|consen 172 TP----RLFTAGWTEDLREVVNHIKKRYPQ--APLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW-DLLAASRSI 244 (409)
T ss_pred CC----ceeecCCHHHHHHHHHHHHHhCCC--CceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc-hhhhhhhHH
Confidence 10 011112348999999999987542 589999999999999998887533 66677777775 422 110
Q ss_pred cC------------CCCC-----------------------CCccccc------ccCCCCCHHHHHHHHcCCccccCCCC
Q 006375 527 LD------------PTIP-----------------------LTTAEWE------EWGDPWKEEFYFYMKSYSPVDNVKAQ 565 (648)
Q Consensus 527 ~~------------~~~~-----------------------~~~~~~~------~~g~~~~~~~~~~~~~~sp~~~~~~~ 565 (648)
.. ..+. .+..+++ .+|-+. ..+|+++.|+...++++
T Consensus 245 ~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~---~deYY~~aSs~~~v~~I 321 (409)
T KOG1838|consen 245 ETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKS---VDEYYKKASSSNYVDKI 321 (409)
T ss_pred hcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCc---HHHHHhhcchhhhcccc
Confidence 00 0000 0001111 123332 33566888999999999
Q ss_pred CCCeEEEeecCCCCccCCc
Q 006375 566 NYPHILVTAGLNDPRVMYS 584 (648)
Q Consensus 566 ~~P~~li~~g~~D~~v~~~ 584 (648)
+.| +|++++.+|++||..
T Consensus 322 ~VP-~L~ina~DDPv~p~~ 339 (409)
T KOG1838|consen 322 KVP-LLCINAADDPVVPEE 339 (409)
T ss_pred ccc-EEEEecCCCCCCCcc
Confidence 999 999999999999874
No 90
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.41 E-value=7.9e-12 Score=122.55 Aligned_cols=104 Identities=14% Similarity=0.091 Sum_probs=74.8
Q ss_pred cEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHH-HHHHHHcCCCCCC
Q 006375 407 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCTKE 485 (648)
Q Consensus 407 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~ 485 (648)
|+||++||..+... .|......|+ +||.|+.+|.||.|..... .......++++... +..+.+. .+.+
T Consensus 2 ~~vv~~hG~~~~~~--~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~ 70 (251)
T TIGR03695 2 PVLVFLHGFLGSGA--DWQALIELLG-PHFRCLAIDLPGHGSSQSP------DEIERYDFEEAAQDILATLLDQ--LGIE 70 (251)
T ss_pred CEEEEEcCCCCchh--hHHHHHHHhc-ccCeEEEEcCCCCCCCCCC------CccChhhHHHHHHHHHHHHHHH--cCCC
Confidence 78999999655433 3555566766 7999999999998865321 01122344555544 4545443 2457
Q ss_pred eEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccc
Q 006375 486 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 521 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d 521 (648)
++.++|+|+||.++..++.++|+.++++++..+...
T Consensus 71 ~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 71 PFFLVGYSMGGRIALYYALQYPERVQGLILESGSPG 106 (251)
T ss_pred eEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCC
Confidence 899999999999999999999999999998877543
No 91
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.41 E-value=8.7e-12 Score=126.84 Aligned_cols=122 Identities=19% Similarity=0.148 Sum_probs=81.0
Q ss_pred EEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccc
Q 006375 380 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 459 (648)
Q Consensus 380 ~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~ 459 (648)
++...+|.+|.... .+ . .+.+.||++||+++.... ......+...+|.|+++|.||.|..... .
T Consensus 8 ~~~~~~~~~l~y~~---~g--~--~~~~~lvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~------~ 71 (306)
T TIGR01249 8 YLNVSDNHQLYYEQ---SG--N--PDGKPVVFLHGGPGSGTD---PGCRRFFDPETYRIVLFDQRGCGKSTPH------A 71 (306)
T ss_pred eEEcCCCcEEEEEE---Cc--C--CCCCEEEEECCCCCCCCC---HHHHhccCccCCEEEEECCCCCCCCCCC------C
Confidence 44455677665431 11 1 123568999998765432 1122334457999999999998754321 0
Q ss_pred cCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCc
Q 006375 460 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 519 (648)
Q Consensus 460 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~ 519 (648)
.......+|+.+.+..+.+.- +.+++.++|+||||.+++.++.++|++++++|+..++
T Consensus 72 ~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (306)
T TIGR01249 72 CLEENTTWDLVADIEKLREKL--GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIF 129 (306)
T ss_pred CcccCCHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccc
Confidence 111234567777777776653 3368999999999999999999999999988887654
No 92
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.41 E-value=6.6e-12 Score=132.39 Aligned_cols=125 Identities=13% Similarity=0.110 Sum_probs=82.1
Q ss_pred EEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchh-HHHHH---HCCCEEEEEccCCCCCCChhhhh
Q 006375 380 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSS-RLSLL---DRGFIFAIAQIRGGGELGRQWYE 455 (648)
Q Consensus 380 ~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~-~~~l~---~~G~~v~~~~~rG~g~~g~~~~~ 455 (648)
.+.+..+.++....--|++. ...|.||++||..+... .|... +..|. .++|.|+++|+||.|.....
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~----~~k~~VVLlHG~~~s~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p--- 249 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDN----KAKEDVLFIHGFISSSA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKP--- 249 (481)
T ss_pred eeEeeCCeEEEEEEecCCCC----CCCCeEEEECCCCccHH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCC---
Confidence 34444556666554444332 22478999999765432 23322 23333 47999999999998865321
Q ss_pred cccccCCCCcHhHHHHHHH-HHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCc
Q 006375 456 NGKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 519 (648)
Q Consensus 456 ~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~ 519 (648)
......++++.+.+. .+.+.- +.+++.++|+||||+++..++.++|++++++|+.+|.
T Consensus 250 ----~~~~ytl~~~a~~l~~~ll~~l--g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 250 ----ADSLYTLREHLEMIERSVLERY--KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred ----CCCcCCHHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 111235666666663 444432 3368999999999999999999999999999988764
No 93
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.40 E-value=6.2e-12 Score=130.29 Aligned_cols=110 Identities=20% Similarity=0.176 Sum_probs=76.7
Q ss_pred CCcEEEEecCCCCCCC---CCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCC
Q 006375 405 SDPLLLYGYGSYEICN---DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 481 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~---~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 481 (648)
+.| ||++||-..... .......+..|+++||.|+++|+||.|.....+. ......+|+.++++++.++.
T Consensus 62 ~~p-vl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~------~~d~~~~~~~~~v~~l~~~~- 133 (350)
T TIGR01836 62 KTP-LLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLT------LDDYINGYIDKCVDYICRTS- 133 (350)
T ss_pred CCc-EEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCC------HHHHHHHHHHHHHHHHHHHh-
Confidence 345 888887321111 1112445678899999999999998664211110 00011245778899998763
Q ss_pred CCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccc
Q 006375 482 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL 523 (648)
Q Consensus 482 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~ 523 (648)
..+++.++|+|+||.+++.++..+|+.++++|+.++.+|..
T Consensus 134 -~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 134 -KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFE 174 (350)
T ss_pred -CCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccC
Confidence 34789999999999999999999999999999999888753
No 94
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.39 E-value=2.2e-11 Score=127.94 Aligned_cols=106 Identities=18% Similarity=0.136 Sum_probs=69.2
Q ss_pred CCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHH-HHHHHcCCCC
Q 006375 405 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA-EYLIKNCYCT 483 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d 483 (648)
..|+||++||..+.. ..|...+..|. ++|.|+++|+||.|...+.-.. ........+.+.+.+ +|+... +
T Consensus 104 ~~p~vvllHG~~~~~--~~~~~~~~~L~-~~~~vi~~D~rG~G~S~~~~~~---~~~~~~~~~~~~~~i~~~~~~l---~ 174 (402)
T PLN02894 104 DAPTLVMVHGYGASQ--GFFFRNFDALA-SRFRVIAIDQLGWGGSSRPDFT---CKSTEETEAWFIDSFEEWRKAK---N 174 (402)
T ss_pred CCCEEEEECCCCcch--hHHHHHHHHHH-hCCEEEEECCCCCCCCCCCCcc---cccHHHHHHHHHHHHHHHHHHc---C
Confidence 468999999965432 22334445555 4699999999999876432110 000001112233333 344333 3
Q ss_pred CCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCc
Q 006375 484 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 519 (648)
Q Consensus 484 ~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~ 519 (648)
..++.++|+||||++++.++.++|+.++++|+..|.
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 468999999999999999999999999999888764
No 95
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.38 E-value=4.2e-11 Score=116.97 Aligned_cols=214 Identities=14% Similarity=0.040 Sum_probs=129.7
Q ss_pred EEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCC--CCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhc
Q 006375 379 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN--DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 456 (648)
Q Consensus 379 ~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~--~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~ 456 (648)
+++++..|. +.+++..|.+. ++.|+||++||..+... ...|...+..|+++||.|+.+|+||.|.........
T Consensus 3 ~~l~~~~g~-~~~~~~~p~~~----~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~ 77 (266)
T TIGR03101 3 FFLDAPHGF-RFCLYHPPVAV----GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAA 77 (266)
T ss_pred EEecCCCCc-EEEEEecCCCC----CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccC
Confidence 556666666 55654544432 34689999999433221 122334456888899999999999988653322110
Q ss_pred ccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccc----------
Q 006375 457 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM---------- 526 (648)
Q Consensus 457 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~---------- 526 (648)
.-....+|+.+++++|.+.+ ..+|.++|+||||.+++.++.++|+.++++|+.+|++......
T Consensus 78 ----~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~ 150 (266)
T TIGR03101 78 ----RWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLVA 150 (266)
T ss_pred ----CHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHHH
Confidence 11123588999999998764 3689999999999999999999999999999999987633221
Q ss_pred --cCCCCC---------CCcccc-cccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCC-CCccCCchHHHHHHHH
Q 006375 527 --LDPTIP---------LTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLN-DPRVMYSEPAKFVAKL 593 (648)
Q Consensus 527 --~~~~~~---------~~~~~~-~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~-D~~v~~~~~~~~~~~l 593 (648)
+....+ +...+. +-.|..--++....|.+.....-+.. .. ++|++.-.- +..-+..-..++.+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 228 (266)
T TIGR03101 151 RRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPK-NC-PVHWFEVRPEEGATLSPVFSRLGEQW 228 (266)
T ss_pred HhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCC-CC-ceEEEEeccccCCCCCHHHHHHHHHH
Confidence 000000 000000 11122222333344444332211111 33 366665532 2233445678999999
Q ss_pred HhcCCCCCeEEEE
Q 006375 594 REMKTDDNILLFK 606 (648)
Q Consensus 594 ~~~~~~~~~~~~~ 606 (648)
++.|++.+...++
T Consensus 229 ~~~g~~v~~~~~~ 241 (266)
T TIGR03101 229 VQSGVEVTVDLVP 241 (266)
T ss_pred HHcCCeEeeeecC
Confidence 9999887766665
No 96
>PRK06489 hypothetical protein; Provisional
Probab=99.38 E-value=3.7e-12 Score=132.49 Aligned_cols=110 Identities=15% Similarity=0.126 Sum_probs=70.5
Q ss_pred CcEEEEecCCCCCCCCCCCchhHH-------HHHHCCCEEEEEccCCCCCCChhhhhccc-ccCCCCcHhHHHHHH-HHH
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRL-------SLLDRGFIFAIAQIRGGGELGRQWYENGK-FLKKKNTFTDFIACA-EYL 476 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~-------~l~~~G~~v~~~~~rG~g~~g~~~~~~~~-~~~~~~~~~D~~~~~-~~l 476 (648)
.|.||++||..++...+.-..... .+..++|.|+++|+||+|.....- ... .......++|+.+.+ +.+
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~--~~~~~~~~~~~~~~~a~~~~~~l 146 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPS--DGLRAAFPRYDYDDMVEAQYRLV 146 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCC--cCCCCCCCcccHHHHHHHHHHHH
Confidence 578999999766543321011111 123578999999999988653110 000 000124567777544 434
Q ss_pred HHcCCCCCCeEE-EEeeChhHHHHHHHHhhCCCceeEEEecCCc
Q 006375 477 IKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 519 (648)
Q Consensus 477 ~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~ 519 (648)
.++-.+ +++. ++|+||||.+++.++.++|++++++|+.++.
T Consensus 147 ~~~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 147 TEGLGV--KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred HHhcCC--CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 443222 5664 8999999999999999999999999987653
No 97
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.38 E-value=1.9e-11 Score=122.94 Aligned_cols=102 Identities=16% Similarity=0.135 Sum_probs=74.7
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCC
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 485 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 485 (648)
.|.||++||..... ..|......| .++|.|+++|.||.|..... ......++++.+.+..+++.- +.+
T Consensus 34 ~~~iv~lHG~~~~~--~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~ 101 (286)
T PRK03204 34 GPPILLCHGNPTWS--FLYRDIIVAL-RDRFRCVAPDYLGFGLSERP-------SGFGYQIDEHARVIGEFVDHL--GLD 101 (286)
T ss_pred CCEEEEECCCCccH--HHHHHHHHHH-hCCcEEEEECCCCCCCCCCC-------CccccCHHHHHHHHHHHHHHh--CCC
Confidence 47899999965322 2244434444 46799999999998865431 111245678888888877653 347
Q ss_pred eEEEEeeChhHHHHHHHHhhCCCceeEEEecCCc
Q 006375 486 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 519 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~ 519 (648)
++.++|+||||.++..++..+|++++++|+.++.
T Consensus 102 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 102 RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred CEEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 8999999999999999999999999999877654
No 98
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.38 E-value=5e-11 Score=115.38 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=74.2
Q ss_pred CCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHc-CCC
Q 006375 404 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYC 482 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~ 482 (648)
+..|+||++||-+....++. .....|+++||.|+++|.||-|..-.. ......++.-+..-+..|++. +
T Consensus 42 ~~gP~illlHGfPe~wyswr--~q~~~la~~~~rviA~DlrGyG~Sd~P------~~~~~Yt~~~l~~di~~lld~Lg-- 111 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWYSWR--HQIPGLASRGYRVIAPDLRGYGFSDAP------PHISEYTIDELVGDIVALLDHLG-- 111 (322)
T ss_pred CCCCEEEEEccCCccchhhh--hhhhhhhhcceEEEecCCCCCCCCCCC------CCcceeeHHHHHHHHHHHHHHhc--
Confidence 45799999999887766544 446788999999999999987643221 111223334444433333332 3
Q ss_pred CCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecC
Q 006375 483 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV 517 (648)
Q Consensus 483 d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~ 517 (648)
-+|+.++||++|+.++..++..+|+++.+.|+..
T Consensus 112 -~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~n 145 (322)
T KOG4178|consen 112 -LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLN 145 (322)
T ss_pred -cceeEEEeccchhHHHHHHHHhChhhcceEEEec
Confidence 3899999999999999999999999999988654
No 99
>COG0400 Predicted esterase [General function prediction only]
Probab=99.38 E-value=1.1e-11 Score=115.34 Aligned_cols=186 Identities=17% Similarity=0.192 Sum_probs=120.0
Q ss_pred CCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhh---hhcccccCC--CCcHhHHHHHHHHHHH
Q 006375 404 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW---YENGKFLKK--KNTFTDFIACAEYLIK 478 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~---~~~~~~~~~--~~~~~D~~~~~~~l~~ 478 (648)
...|+||++||-. .....|.+.. .+..-.+.++.++-+-.-+.+..| ...+..+.+ ......+.+.++.+..
T Consensus 16 p~~~~iilLHG~G--gde~~~~~~~-~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 16 PAAPLLILLHGLG--GDELDLVPLP-ELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCcEEEEEecCC--CChhhhhhhh-hhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 4468999999943 2233444422 222234666666433222222333 222222211 1233455566666666
Q ss_pred cCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHHHHHHHHcCCc
Q 006375 479 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSP 558 (648)
Q Consensus 479 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp 558 (648)
+..+|++|+.+.|+|.|+.+++.++.++|++|+++|+..|.+-... .+
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~--------------------------------~~ 140 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP--------------------------------EL 140 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC--------------------------------cc
Confidence 7778999999999999999999999999999999999988542110 01
Q ss_pred cccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHhc
Q 006375 559 VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 637 (648)
Q Consensus 559 ~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 637 (648)
..+. ... |+|++||..|++||..++.++.+.|++.+.+++...+ ..||.... + ++.....|+.+.+
T Consensus 141 ~~~~--~~~-pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~----~~GH~i~~---e---~~~~~~~wl~~~~ 206 (207)
T COG0400 141 LPDL--AGT-PILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWH----EGGHEIPP---E---ELEAARSWLANTL 206 (207)
T ss_pred cccc--CCC-eEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEe----cCCCcCCH---H---HHHHHHHHHHhcc
Confidence 1111 134 4999999999999999999999999999988755544 37996532 2 2224456887654
No 100
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.37 E-value=1.7e-11 Score=127.22 Aligned_cols=113 Identities=14% Similarity=0.091 Sum_probs=76.1
Q ss_pred CcEEEEecCCCCCCCCC---------CCchhH---HHHHHCCCEEEEEccCC--CCCCCh-hhhhcccc---cCCCCcHh
Q 006375 406 DPLLLYGYGSYEICNDP---------AFNSSR---LSLLDRGFIFAIAQIRG--GGELGR-QWYENGKF---LKKKNTFT 467 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~---------~~~~~~---~~l~~~G~~v~~~~~rG--~g~~g~-~~~~~~~~---~~~~~~~~ 467 (648)
.|.||++||-.++.... .|...+ ..|..++|.|+++|+|| +|..+. ++...+.. .....+++
T Consensus 31 ~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 110 (351)
T TIGR01392 31 SNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIR 110 (351)
T ss_pred CCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHH
Confidence 47899999955533211 123222 25556899999999999 444443 22111111 11235678
Q ss_pred HHHHHHHHHHHcCCCCCCe-EEEEeeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 006375 468 DFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 520 (648)
Q Consensus 468 D~~~~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~ 520 (648)
|+.+.+..+++.- .-++ +.++|+||||.++..++.++|++++++|+..+..
T Consensus 111 ~~~~~~~~~~~~l--~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 111 DDVKAQKLLLDHL--GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 8887777666553 2367 9999999999999999999999999988877653
No 101
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.37 E-value=5.4e-12 Score=123.49 Aligned_cols=194 Identities=16% Similarity=0.125 Sum_probs=113.3
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCC
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 485 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 485 (648)
.|.||++||..+.. ..|......|. .+|.|+++|+||.|..... ....++++ ++.+.+.. .+
T Consensus 4 ~~~iv~~HG~~~~~--~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~---------~~~~~~~~---~~~~~~~~---~~ 65 (245)
T TIGR01738 4 NVHLVLIHGWGMNA--EVFRCLDEELS-AHFTLHLVDLPGHGRSRGF---------GPLSLADA---AEAIAAQA---PD 65 (245)
T ss_pred CceEEEEcCCCCch--hhHHHHHHhhc-cCeEEEEecCCcCccCCCC---------CCcCHHHH---HHHHHHhC---CC
Confidence 37899999954432 23444455554 5799999999998864211 11234444 44444332 26
Q ss_pred eEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccc--cccCCC-----------CC--C--Ccccc---cccCCCC
Q 006375 486 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--TMLDPT-----------IP--L--TTAEW---EEWGDPW 545 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~--~~~~~~-----------~~--~--~~~~~---~~~g~~~ 545 (648)
++.++|+|+||.++..++.++|++++++|+..+...+.. .+.... .. . ....+ ...+.+.
T Consensus 66 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (245)
T TIGR01738 66 PAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPT 145 (245)
T ss_pred CeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc
Confidence 899999999999999999999999999887765432110 000000 00 0 00000 0011111
Q ss_pred CH------------------H----HHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeE
Q 006375 546 KE------------------E----FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 603 (648)
Q Consensus 546 ~~------------------~----~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 603 (648)
.. . .+..+...+....+.++++| +|+++|++|..||+...+.+.+.+. ..+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlii~g~~D~~~~~~~~~~~~~~~~----~~~~~ 220 (245)
T TIGR01738 146 ARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVP-FLRLYGYLDGLVPAKVVPYLDKLAP----HSELY 220 (245)
T ss_pred cchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCC-EEEEeecCCcccCHHHHHHHHHhCC----CCeEE
Confidence 00 0 00111111222345677888 9999999999999887777765553 34455
Q ss_pred EEEecCCCCccCCCchHHHHHH
Q 006375 604 LFKCELGAGHFSKSGRFERLRE 625 (648)
Q Consensus 604 ~~~~~~~~gH~~~~~~~~~~~~ 625 (648)
+++ ++||+......+.+.+
T Consensus 221 ~~~---~~gH~~~~e~p~~~~~ 239 (245)
T TIGR01738 221 IFA---KAAHAPFLSHAEAFCA 239 (245)
T ss_pred EeC---CCCCCccccCHHHHHH
Confidence 665 8899876666554444
No 102
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.37 E-value=9.7e-12 Score=130.47 Aligned_cols=102 Identities=14% Similarity=0.132 Sum_probs=75.8
Q ss_pred CCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCC
Q 006375 405 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 484 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 484 (648)
+.|.||++||..+... .|......| .++|.|+++|+||.|..... .....++++.+.+..+.+. .++
T Consensus 130 ~~~~vl~~HG~~~~~~--~~~~~~~~l-~~~~~v~~~d~~g~G~s~~~--------~~~~~~~~~~~~~~~~~~~--~~~ 196 (371)
T PRK14875 130 DGTPVVLIHGFGGDLN--NWLFNHAAL-AAGRPVIALDLPGHGASSKA--------VGAGSLDELAAAVLAFLDA--LGI 196 (371)
T ss_pred CCCeEEEECCCCCccc--hHHHHHHHH-hcCCEEEEEcCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHh--cCC
Confidence 3578999998554433 234434444 45799999999998876321 1234567877777776654 456
Q ss_pred CeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCc
Q 006375 485 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 519 (648)
Q Consensus 485 ~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~ 519 (648)
.++.++|+|+||+++..++.++|+.++++|+.+|.
T Consensus 197 ~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 197 ERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred ccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 78999999999999999999999999999988775
No 103
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.35 E-value=5.2e-13 Score=128.88 Aligned_cols=193 Identities=19% Similarity=0.256 Sum_probs=114.4
Q ss_pred EEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEE
Q 006375 409 LLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLC 488 (648)
Q Consensus 409 vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~ 488 (648)
||++||..+.. ..|...+..| .+||.|+++|.||.|.....-. .....+++..+.+..+++.- ..+++.
T Consensus 1 vv~~hG~~~~~--~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~~l~~~l~~~--~~~~~~ 69 (228)
T PF12697_consen 1 VVFLHGFGGSS--ESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPPD------YSPYSIEDYAEDLAELLDAL--GIKKVI 69 (228)
T ss_dssp EEEE-STTTTG--GGGHHHHHHH-HTTSEEEEEECTTSTTSSSHSS------GSGGSHHHHHHHHHHHHHHT--TTSSEE
T ss_pred eEEECCCCCCH--HHHHHHHHHH-hCCCEEEEEecCCccccccccc------cCCcchhhhhhhhhhccccc--cccccc
Confidence 78999976554 4466666666 5899999999999886543210 11234555555555555442 227899
Q ss_pred EEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccc--------cCCCCC--------CCcccccccCCCCC-HH---
Q 006375 489 IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM--------LDPTIP--------LTTAEWEEWGDPWK-EE--- 548 (648)
Q Consensus 489 i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~--------~~~~~~--------~~~~~~~~~g~~~~-~~--- 548 (648)
++|+|+||.+++.++.++|+.++++|+..|........ +..-.. +....+..+-.... .+
T Consensus 70 lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (228)
T PF12697_consen 70 LVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIR 149 (228)
T ss_dssp EEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999887532110 000000 00000000000000 00
Q ss_pred -----HHHHH----HcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCch
Q 006375 549 -----FYFYM----KSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR 619 (648)
Q Consensus 549 -----~~~~~----~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~ 619 (648)
..+.+ ....+...+.++++| +++++|++|..++.....++.+.+. ..++++++ ++||......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-vl~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~---~~gH~~~~~~ 221 (228)
T PF12697_consen 150 SSRRALAEYLRSNLWQADLSEALPRIKVP-VLVIHGEDDPIVPPESAEELADKLP----NAELVVIP---GAGHFLFLEQ 221 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGSSSE-EEEEEETTSSSSHHHHHHHHHHHST----TEEEEEET---TSSSTHHHHS
T ss_pred ccccccccccccccccccccccccccCCC-eEEeecCCCCCCCHHHHHHHHHHCC----CCEEEEEC---CCCCccHHHC
Confidence 00111 112223455566787 9999999999998555555554442 34555554 8999754333
Q ss_pred H
Q 006375 620 F 620 (648)
Q Consensus 620 ~ 620 (648)
.
T Consensus 222 p 222 (228)
T PF12697_consen 222 P 222 (228)
T ss_dssp H
T ss_pred H
Confidence 3
No 104
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.35 E-value=4.3e-11 Score=119.25 Aligned_cols=106 Identities=17% Similarity=0.187 Sum_probs=76.2
Q ss_pred CCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCC
Q 006375 404 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 483 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 483 (648)
++.|.||++||..+.. ..|......|.++||.|+++|+||.|..... ......++++...+..++++-. .
T Consensus 16 ~~~p~vvliHG~~~~~--~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~-------~~~~~~~~~~~~~l~~~i~~l~-~ 85 (273)
T PLN02211 16 RQPPHFVLIHGISGGS--WCWYKIRCLMENSGYKVTCIDLKSAGIDQSD-------ADSVTTFDEYNKPLIDFLSSLP-E 85 (273)
T ss_pred CCCCeEEEECCCCCCc--CcHHHHHHHHHhCCCEEEEecccCCCCCCCC-------cccCCCHHHHHHHHHHHHHhcC-C
Confidence 4568999999965543 3466666777788999999999998753110 1112455666555554444321 2
Q ss_pred CCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCc
Q 006375 484 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 519 (648)
Q Consensus 484 ~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~ 519 (648)
.+++.++||||||.++..++.++|++++++|..++.
T Consensus 86 ~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 86 NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 378999999999999999999999999999988664
No 105
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.34 E-value=2.5e-11 Score=126.91 Aligned_cols=224 Identities=17% Similarity=0.157 Sum_probs=130.4
Q ss_pred CcEEEEecCCCCCCCCCC-----------CchhH---HHHHHCCCEEEEEccCCC-C-CCChhhhhc--ccc---cCCCC
Q 006375 406 DPLLLYGYGSYEICNDPA-----------FNSSR---LSLLDRGFIFAIAQIRGG-G-ELGRQWYEN--GKF---LKKKN 464 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~-----------~~~~~---~~l~~~G~~v~~~~~rG~-g-~~g~~~~~~--~~~---~~~~~ 464 (648)
.|.||++||..++..... |...+ ..+...+|.|+++|++|+ + ..+...... +.. .....
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 589999999665543211 22221 134357999999999983 2 223221100 000 01135
Q ss_pred cHhHHHHHHHHHHHcCCCCCCe-EEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccc----------ccc--CCC-
Q 006375 465 TFTDFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT----------TML--DPT- 530 (648)
Q Consensus 465 ~~~D~~~~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~----------~~~--~~~- 530 (648)
+++|+.+.+..+++.-.+ ++ +.++|+||||.++..++.++|++++++|+.++...... ... +..
T Consensus 128 ~~~~~~~~~~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 205 (379)
T PRK00175 128 TIRDWVRAQARLLDALGI--TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNEVARQAILADPDW 205 (379)
T ss_pred CHHHHHHHHHHHHHHhCC--CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCC
Confidence 678888877777765333 56 48999999999999999999999999998875432110 000 000
Q ss_pred ----------CCCC-------------c--ccc-cccCC----C---------CCHHHH------HHHHcCCc-------
Q 006375 531 ----------IPLT-------------T--AEW-EEWGD----P---------WKEEFY------FYMKSYSP------- 558 (648)
Q Consensus 531 ----------~~~~-------------~--~~~-~~~g~----~---------~~~~~~------~~~~~~sp------- 558 (648)
.+.. . ..+ ..++. + ...+.+ .+...+++
T Consensus 206 ~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~ 285 (379)
T PRK00175 206 HGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLT 285 (379)
T ss_pred CCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHH
Confidence 0000 0 000 00100 0 000000 00111111
Q ss_pred ----------------cccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHH
Q 006375 559 ----------------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 622 (648)
Q Consensus 559 ----------------~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 622 (648)
...++++++| +|+++|++|..+|+..++++.+.+...+...++++++ +++||.......+.
T Consensus 286 ~~~~~~d~~~~~~~d~~~~l~~I~~P-tLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~--~~~GH~~~le~p~~ 362 (379)
T PRK00175 286 RALDYFDPARGRGGDLAAALARIKAR-FLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEID--SPYGHDAFLLDDPR 362 (379)
T ss_pred HHHHhccccCCCCCCHHHHHhcCCCC-EEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeC--CCCCchhHhcCHHH
Confidence 1234567898 9999999999999999999999998766554545453 37899776666654
Q ss_pred HHHHHHHHHHHHHh
Q 006375 623 LREAAFTYTFLMRA 636 (648)
Q Consensus 623 ~~~~~~~~~fl~~~ 636 (648)
+.. .+.+||.+.
T Consensus 363 ~~~--~L~~FL~~~ 374 (379)
T PRK00175 363 YGR--LVRAFLERA 374 (379)
T ss_pred HHH--HHHHHHHhh
Confidence 444 456888764
No 106
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.34 E-value=2.6e-11 Score=126.66 Aligned_cols=210 Identities=20% Similarity=0.215 Sum_probs=143.8
Q ss_pred cceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCC-CCCC-CCCCchh----HHHHHHCCCEEEEEccCCCC
Q 006375 374 YFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY-EICN-DPAFNSS----RLSLLDRGFIFAIAQIRGGG 447 (648)
Q Consensus 374 ~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~-~~~~-~~~~~~~----~~~l~~~G~~v~~~~~rG~g 447 (648)
+..+.+.++..||++|...++.|++. ++.|+++..+=.+ .... ....... ...|+.+||+|+..|+||.+
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~----g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~ 92 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGA----GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRG 92 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCC----CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccc
Confidence 56678899999999999999999875 7899999887221 1111 0111111 13688999999999999999
Q ss_pred CCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccccc
Q 006375 448 ELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML 527 (648)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~ 527 (648)
++...|... .. ...+|-.++|+||.++.+.| .+|+.+|.|++|+...++|+..|.-.||++...+..|+.+...
T Consensus 93 ~SeG~~~~~----~~-~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~d~~ 166 (563)
T COG2936 93 GSEGVFDPE----SS-REAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYRDDA 166 (563)
T ss_pred cCCccccee----cc-ccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeecccccccccccccc
Confidence 876665422 11 36689999999999999876 7999999999999998888887777899999999888554321
Q ss_pred CCC------------------CCCC--------------c--cccccc------CCCCC-------HHHHHHHHcCCccc
Q 006375 528 DPT------------------IPLT--------------T--AEWEEW------GDPWK-------EEFYFYMKSYSPVD 560 (648)
Q Consensus 528 ~~~------------------~~~~--------------~--~~~~~~------g~~~~-------~~~~~~~~~~sp~~ 560 (648)
..+ .+++ . ..|.+. +.|.. +....++++.+-..
T Consensus 167 ~~~G~~~~~~~~~W~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~~~~~~hp~~ddfW~~~~~~~ 246 (563)
T COG2936 167 FYGGGAELNFNLGWALTMLAPQPLTRIRPARLDRLAPLRVGAERWRDAPTELLEGEPYFLELWLEHPLRDDFWRRGDRVA 246 (563)
T ss_pred ccCcchhhhhhHHHHhhhcccCcccccccccccccchhhhhhccccccccchhccCcccchhhhcCCCccchhhccCccc
Confidence 000 0000 0 001000 11110 11111344455556
Q ss_pred cCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhc
Q 006375 561 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 596 (648)
Q Consensus 561 ~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~ 596 (648)
...++++| +|++.|..|. -....-++++.++..
T Consensus 247 d~~~i~vP-~L~i~gW~D~--~l~~~~~~~~~~~~r 279 (563)
T COG2936 247 DLSKIKVP-ALVIGGWSDG--YLHTAIKLFAFLRSR 279 (563)
T ss_pred ccccCCCc-EEEEcccccc--cccchHHHhhhcccC
Confidence 67788998 9999999996 355677888888764
No 107
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.34 E-value=1.3e-11 Score=122.19 Aligned_cols=194 Identities=14% Similarity=0.149 Sum_probs=115.5
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCC
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 485 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 485 (648)
.|.||++||..+... .|......|. ..|.|+++|.||.|.... + ....++++.. .+.+.. .+
T Consensus 13 ~~~ivllHG~~~~~~--~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~-~--------~~~~~~~~~~---~l~~~~---~~ 74 (256)
T PRK10349 13 NVHLVLLHGWGLNAE--VWRCIDEELS-SHFTLHLVDLPGFGRSRG-F--------GALSLADMAE---AVLQQA---PD 74 (256)
T ss_pred CCeEEEECCCCCChh--HHHHHHHHHh-cCCEEEEecCCCCCCCCC-C--------CCCCHHHHHH---HHHhcC---CC
Confidence 357999999544433 3555555654 569999999999886521 1 1134445443 344432 37
Q ss_pred eEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccc----cCC--------CCC--C--Ccccc---cccCCCC-
Q 006375 486 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM----LDP--------TIP--L--TTAEW---EEWGDPW- 545 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~----~~~--------~~~--~--~~~~~---~~~g~~~- 545 (648)
++.++|+|+||.++..++.++|++++++|+..+..-..... ... .+. . ....+ ..++.+.
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETA 154 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchH
Confidence 89999999999999999999999999998876532111000 000 000 0 00000 0011110
Q ss_pred CHH---------------------HHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEE
Q 006375 546 KEE---------------------FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 604 (648)
Q Consensus 546 ~~~---------------------~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 604 (648)
..+ ....+...+....+.++++| +|+++|++|..+|...+..+.+.+. ..++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~~~~~~~i~----~~~~~~ 229 (256)
T PRK10349 155 RQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMP-FLRLYGYLDGLVPRKVVPMLDKLWP----HSESYI 229 (256)
T ss_pred HHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCC-eEEEecCCCccCCHHHHHHHHHhCC----CCeEEE
Confidence 000 00111223333456667898 9999999999998877665555543 345667
Q ss_pred EEecCCCCccCCCchHHHHHH
Q 006375 605 FKCELGAGHFSKSGRFERLRE 625 (648)
Q Consensus 605 ~~~~~~~gH~~~~~~~~~~~~ 625 (648)
++ ++||+.....++.+..
T Consensus 230 i~---~~gH~~~~e~p~~f~~ 247 (256)
T PRK10349 230 FA---KAAHAPFISHPAEFCH 247 (256)
T ss_pred eC---CCCCCccccCHHHHHH
Confidence 75 8999887777665554
No 108
>PRK07581 hypothetical protein; Validated
Probab=99.33 E-value=8.3e-12 Score=129.06 Aligned_cols=111 Identities=17% Similarity=0.103 Sum_probs=67.5
Q ss_pred CCcEEEEecCCCCCCCCCCCchh-HHHHHHCCCEEEEEccCCCCCCChhhhhccc-ccC--CCCcH-hHHHHHHHHHHH-
Q 006375 405 SDPLLLYGYGSYEICNDPAFNSS-RLSLLDRGFIFAIAQIRGGGELGRQWYENGK-FLK--KKNTF-TDFIACAEYLIK- 478 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~~~~~~~~-~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~-~~~--~~~~~-~D~~~~~~~l~~- 478 (648)
+.|+||+.||..+....+.+... ...|...+|.|+++|.||.|........... ... ....+ +|+.+....|.+
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 119 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK 119 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 44777777775443322211100 1245557899999999999865432110000 000 00122 444444444554
Q ss_pred cCCCCCCeE-EEEeeChhHHHHHHHHhhCCCceeEEEecCC
Q 006375 479 NCYCTKEKL-CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 518 (648)
Q Consensus 479 ~~~~d~~~i-~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~ 518 (648)
.+. +++ .++|+||||.++..++.++|++++++|+.++
T Consensus 120 lgi---~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~ 157 (339)
T PRK07581 120 FGI---ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAG 157 (339)
T ss_pred hCC---CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeec
Confidence 332 674 7899999999999999999999999887754
No 109
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.29 E-value=7.9e-11 Score=115.53 Aligned_cols=99 Identities=12% Similarity=0.054 Sum_probs=70.8
Q ss_pred cEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCe
Q 006375 407 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 486 (648)
Q Consensus 407 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~ 486 (648)
|.||++||..+... .|...+..| ++|.|+++|+||.|..... . ...++++.+.+..+++.. +.++
T Consensus 3 p~vvllHG~~~~~~--~w~~~~~~l--~~~~vi~~D~~G~G~S~~~-------~--~~~~~~~~~~l~~~l~~~--~~~~ 67 (242)
T PRK11126 3 PWLVFLHGLLGSGQ--DWQPVGEAL--PDYPRLYIDLPGHGGSAAI-------S--VDGFADVSRLLSQTLQSY--NILP 67 (242)
T ss_pred CEEEEECCCCCChH--HHHHHHHHc--CCCCEEEecCCCCCCCCCc-------c--ccCHHHHHHHHHHHHHHc--CCCC
Confidence 78999999766543 455555555 4799999999998865421 0 124555555555555432 3479
Q ss_pred EEEEeeChhHHHHHHHHhhCCC-ceeEEEecCCcc
Q 006375 487 LCIEGRSAGGLLIGAVLNMRPD-LFKAAVAAVPFV 520 (648)
Q Consensus 487 i~i~G~S~GG~l~~~~~~~~p~-~~~a~v~~~~~~ 520 (648)
+.++|+||||.+++.++.++|+ +++++++.++..
T Consensus 68 ~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 68 YWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred eEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 9999999999999999999865 499988876543
No 110
>PLN02578 hydrolase
Probab=99.29 E-value=9e-11 Score=121.77 Aligned_cols=95 Identities=13% Similarity=0.066 Sum_probs=66.1
Q ss_pred cEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHh----HHHHHHHHHHHcCCC
Q 006375 407 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFT----DFIACAEYLIKNCYC 482 (648)
Q Consensus 407 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~----D~~~~~~~l~~~~~~ 482 (648)
|.||++||..+.. ..|......|+ ++|.|+++|+||.|....... ....+ |+.+.++.+.
T Consensus 87 ~~vvliHG~~~~~--~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~~~--------~~~~~~~a~~l~~~i~~~~----- 150 (354)
T PLN02578 87 LPIVLIHGFGASA--FHWRYNIPELA-KKYKVYALDLLGFGWSDKALI--------EYDAMVWRDQVADFVKEVV----- 150 (354)
T ss_pred CeEEEECCCCCCH--HHHHHHHHHHh-cCCEEEEECCCCCCCCCCccc--------ccCHHHHHHHHHHHHHHhc-----
Confidence 5689999954432 22444444554 579999999999887654321 11222 3333333332
Q ss_pred CCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCC
Q 006375 483 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 518 (648)
Q Consensus 483 d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~ 518 (648)
.+++.++|+|+||+++..++.++|++++++|+.++
T Consensus 151 -~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~ 185 (354)
T PLN02578 151 -KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185 (354)
T ss_pred -cCCeEEEEECHHHHHHHHHHHhChHhcceEEEECC
Confidence 36799999999999999999999999999998765
No 111
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.28 E-value=5.3e-10 Score=115.75 Aligned_cols=200 Identities=15% Similarity=0.098 Sum_probs=137.1
Q ss_pred eeEEeCCCCCEEEEEEeC-C----------------------------C--CeEEEEEEEECCCCCeeecc-------cc
Q 006375 84 GCFQVSPDNKLVAYAEDT-K----------------------------G--DEIYTVYVIDIETGTPVGKP-------LV 125 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~-~----------------------------G--~e~~~l~v~dl~~g~~~~~~-------~~ 125 (648)
..+.|||||++|||..-. . | +....|+|+|+++++..... ..
T Consensus 104 ~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~ 183 (353)
T PF00930_consen 104 SAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQD 183 (353)
T ss_dssp BSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSS
T ss_pred cceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCc
Confidence 478999999999998521 1 1 12468899999999864221 12
Q ss_pred CccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeE---EEEEeC-CCCcEEEEEEccccccE
Q 006375 126 GVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYS---LGLQAS-ESKKFLFIASESKITRF 200 (648)
Q Consensus 126 ~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~s-~Dg~~l~~~~~~~~~~~ 200 (648)
.....+.|++|+ .|++...++......+.+.+..++ ...++.++....|. ..+.+. +++..+++.+...+..+
T Consensus 184 ~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg--~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~h 261 (353)
T PF00930_consen 184 YYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTG--ETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRH 261 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTT--TCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEE
T ss_pred cCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCC--ceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcE
Confidence 235679999999 799998887777778888898886 34555666555552 133444 77777777777767899
Q ss_pred EEEEECCCCCceeEeeecccce--eeeEeecCCEEEEEeccCCCCCcEEEEEeCC-CCCcceeEecCCCCcccceEEEeC
Q 006375 201 VFYLDVSKPEELRVLTPRVVGV--DTAASHRGNHFFITRRSDELFNSELLACPVD-NTSETTVLIPHRESVKLQDIQLFI 277 (648)
Q Consensus 201 l~~~dl~~~~~~~~l~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 277 (648)
||+++.+++. .+.|+.+...+ ...++++++.|||+++.++....+||+++++ + +..+.++.......-..+++++
T Consensus 262 ly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~-~~~~~LT~~~~~~~~~~~Spdg 339 (353)
T PF00930_consen 262 LYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSG-GEPKCLTCEDGDHYSASFSPDG 339 (353)
T ss_dssp EEEEETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTET-TEEEESSTTSSTTEEEEE-TTS
T ss_pred EEEEcccccc-eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCC-CCeEeccCCCCCceEEEECCCC
Confidence 9999999987 78888776554 3569999999999999866677899999998 5 3444344333222134566666
Q ss_pred CEEEEEEecC
Q 006375 278 DHLAVYEREG 287 (648)
Q Consensus 278 ~~l~~~~~~~ 287 (648)
+++++.+..-
T Consensus 340 ~y~v~~~s~~ 349 (353)
T PF00930_consen 340 KYYVDTYSGP 349 (353)
T ss_dssp SEEEEEEESS
T ss_pred CEEEEEEcCC
Confidence 7777666543
No 112
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.28 E-value=1.1e-10 Score=120.77 Aligned_cols=185 Identities=16% Similarity=0.091 Sum_probs=106.9
Q ss_pred HHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCe-EEEEeeChhHHHHHHHHhhCCCc
Q 006375 431 LLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPDL 509 (648)
Q Consensus 431 l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~~ 509 (648)
|...+|.|+++|.||.|+... ....++|+.+.+..+++.-.+ ++ +.++|+||||++++.++.++|++
T Consensus 95 L~~~~~~Vi~~Dl~G~g~s~~----------~~~~~~~~a~dl~~ll~~l~l--~~~~~lvG~SmGG~vA~~~A~~~P~~ 162 (343)
T PRK08775 95 LDPARFRLLAFDFIGADGSLD----------VPIDTADQADAIALLLDALGI--ARLHAFVGYSYGALVGLQFASRHPAR 162 (343)
T ss_pred cCccccEEEEEeCCCCCCCCC----------CCCCHHHHHHHHHHHHHHcCC--CcceEEEEECHHHHHHHHHHHHChHh
Confidence 444689999999998764311 112345555555555543222 45 57999999999999999999999
Q ss_pred eeEEEecCCcccccc----------cc--cCCC--CC--------------C-Ccccc-cccCCCC-------CHHHH--
Q 006375 510 FKAAVAAVPFVDVLT----------TM--LDPT--IP--------------L-TTAEW-EEWGDPW-------KEEFY-- 550 (648)
Q Consensus 510 ~~a~v~~~~~~d~~~----------~~--~~~~--~~--------------~-~~~~~-~~~g~~~-------~~~~~-- 550 (648)
++++|+.++...... .. .... .. . ....+ ..+.... .....
T Consensus 163 V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T PRK08775 163 VRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDY 242 (343)
T ss_pred hheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHH
Confidence 999998876432110 00 0000 00 0 00000 0111100 00000
Q ss_pred ------HHHHcCCc-------------cccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCC
Q 006375 551 ------FYMKSYSP-------------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 611 (648)
Q Consensus 551 ------~~~~~~sp-------------~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 611 (648)
......++ ...+.++++| +|+++|++|..+|+.++.++.+++.. ..++++++ .++
T Consensus 243 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~P-tLvi~G~~D~~~p~~~~~~~~~~i~p---~a~l~~i~--~~a 316 (343)
T PRK08775 243 LDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVP-TVVVAVEGDRLVPLADLVELAEGLGP---RGSLRVLR--SPY 316 (343)
T ss_pred HHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCC-eEEEEeCCCEeeCHHHHHHHHHHcCC---CCeEEEEe--CCc
Confidence 01111111 1135567888 99999999999998888888777642 24456664 138
Q ss_pred CccCCCchHHHHHHHHHHHHHHHH
Q 006375 612 GHFSKSGRFERLREAAFTYTFLMR 635 (648)
Q Consensus 612 gH~~~~~~~~~~~~~~~~~~fl~~ 635 (648)
||......++.++. .+.+||.+
T Consensus 317 GH~~~lE~Pe~~~~--~l~~FL~~ 338 (343)
T PRK08775 317 GHDAFLKETDRIDA--ILTTALRS 338 (343)
T ss_pred cHHHHhcCHHHHHH--HHHHHHHh
Confidence 99876666665554 34677754
No 113
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.25 E-value=8.2e-11 Score=111.89 Aligned_cols=144 Identities=22% Similarity=0.208 Sum_probs=77.7
Q ss_pred HhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccccc--CC---CCCCCcccc--
Q 006375 466 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML--DP---TIPLTTAEW-- 538 (648)
Q Consensus 466 ~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~--~~---~~~~~~~~~-- 538 (648)
++=|..|++||.++..+++++|+|+|.|.||-+|+.++...| .++|+|+.+|..-+..... .. .+|......
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~ 81 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISK 81 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhh
Confidence 466889999999999999999999999999999999999998 6999999988543332110 10 111111100
Q ss_pred ---cccCCCCCHHHHHHH------HcCCccccCCCCCCCeEEEeecCCCCccCCc-hHHHHHHHHHhcCCCCCeEEEEec
Q 006375 539 ---EEWGDPWKEEFYFYM------KSYSPVDNVKAQNYPHILVTAGLNDPRVMYS-EPAKFVAKLREMKTDDNILLFKCE 608 (648)
Q Consensus 539 ---~~~g~~~~~~~~~~~------~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~ 608 (648)
..-+.......+... .+.-| +.++++| +|+++|++|...|-. .+..+.++|++++.+.+...+. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~Ip---vE~i~~p-iLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~-Y 156 (213)
T PF08840_consen 82 FSWNEPGLLRSRYAFELADDKAVEEARIP---VEKIKGP-ILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLS-Y 156 (213)
T ss_dssp -EE-TTS-EE-TT-B--TTTGGGCCCB-----GGG--SE-EEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEE-E
T ss_pred ceecCCcceehhhhhhccccccccccccc---HHHcCCC-EEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEE-c
Confidence 000110000000000 11123 4455787 999999999988754 4446667888888774333322 2
Q ss_pred CCCCccC
Q 006375 609 LGAGHFS 615 (648)
Q Consensus 609 ~~~gH~~ 615 (648)
+++||..
T Consensus 157 ~~aGH~i 163 (213)
T PF08840_consen 157 PGAGHLI 163 (213)
T ss_dssp TTB-S--
T ss_pred CCCCcee
Confidence 4999953
No 114
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.22 E-value=2e-10 Score=114.49 Aligned_cols=201 Identities=20% Similarity=0.280 Sum_probs=120.0
Q ss_pred HHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHH-cCCCCCCeEEEEeeChhHHHHHHHHhh-
Q 006375 428 RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK-NCYCTKEKLCIEGRSAGGLLIGAVLNM- 505 (648)
Q Consensus 428 ~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~~i~i~G~S~GG~l~~~~~~~- 505 (648)
...|+++||+|+++||-|-|. .|.. +. .....+-|.+.|++.+.. .+.....+++++|+|.||..+++++..
T Consensus 19 l~~~L~~GyaVv~pDY~Glg~---~y~~-~~--~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~ 92 (290)
T PF03583_consen 19 LAAWLARGYAVVAPDYEGLGT---PYLN-GR--SEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELA 92 (290)
T ss_pred HHHHHHCCCEEEecCCCCCCC---cccC-cH--hHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHh
Confidence 467889999999999998765 3311 11 111233455555554444 243345799999999999988777644
Q ss_pred ---CCCc---eeEEEecCCcccccccccCC-CCCCCc----------ccccc----------------------------
Q 006375 506 ---RPDL---FKAAVAAVPFVDVLTTMLDP-TIPLTT----------AEWEE---------------------------- 540 (648)
Q Consensus 506 ---~p~~---~~a~v~~~~~~d~~~~~~~~-~~~~~~----------~~~~~---------------------------- 540 (648)
.||+ +.++++..|..|+...+..- ..+... ..+.+
T Consensus 93 ~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~~ 172 (290)
T PF03583_consen 93 PSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLADI 172 (290)
T ss_pred HHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHHH
Confidence 4665 78999999988866543210 000000 00000
Q ss_pred --------c--C-----CC-----CCHHHHHHHHcCCc-cccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcC-C
Q 006375 541 --------W--G-----DP-----WKEEFYFYMKSYSP-VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK-T 598 (648)
Q Consensus 541 --------~--g-----~~-----~~~~~~~~~~~~sp-~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~-~ 598 (648)
. + .+ .++...+.+...+. +..-...+.| |+|.||.+|..||+....++++++++.| .
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~P-v~i~~g~~D~vvP~~~~~~l~~~~c~~G~a 251 (290)
T PF03583_consen 173 VAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVP-VLIYQGTADEVVPPADTDALVAKWCAAGGA 251 (290)
T ss_pred HHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCC-EEEEecCCCCCCChHHHHHHHHHHHHcCCC
Confidence 0 0 00 01111112222211 0001122667 9999999999999999999999999999 6
Q ss_pred CCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHhcCCCCCC
Q 006375 599 DDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLPSV 643 (648)
Q Consensus 599 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~ 643 (648)
+.++..+ ...+|.... .....+.++||..+|...+.+
T Consensus 252 ~V~~~~~---~~~~H~~~~-----~~~~~~a~~Wl~~rf~G~~~~ 288 (290)
T PF03583_consen 252 DVEYVRY---PGGGHLGAA-----FASAPDALAWLDDRFAGKPAT 288 (290)
T ss_pred CEEEEec---CCCChhhhh-----hcCcHHHHHHHHHHHCCCCCC
Confidence 7554444 477895421 112235689999999876554
No 115
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.18 E-value=1.3e-10 Score=103.18 Aligned_cols=199 Identities=20% Similarity=0.187 Sum_probs=133.3
Q ss_pred CCCcEEEEecCCCCCCCCCCCchh-HHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCC
Q 006375 404 GSDPLLLYGYGSYEICNDPAFNSS-RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 482 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~~~~~~~-~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 482 (648)
...|+++++||||+.......... ......+||+|+.++|--+..- ..-...+.|+...++|+.+.. -
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~----------htL~qt~~~~~~gv~filk~~-~ 133 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQV----------HTLEQTMTQFTHGVNFILKYT-E 133 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCccc----------ccHHHHHHHHHHHHHHHHHhc-c
Confidence 346899999999988766544433 3567788999999987543310 111246789999999988753 3
Q ss_pred CCCeEEEEeeChhHHHHHHHHhh-CCCceeEEEecCCcccccccccCCCCCCCcccccccCCCC--CHHHHHHHHcCCc-
Q 006375 483 TKEKLCIEGRSAGGLLIGAVLNM-RPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPW--KEEFYFYMKSYSP- 558 (648)
Q Consensus 483 d~~~i~i~G~S~GG~l~~~~~~~-~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~sp- 558 (648)
+.+.|.+.|||+|+.|++.+.++ +..++.++++.+|++|+..... .++|+.- ..+. ...-|+
T Consensus 134 n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~-----------te~g~dlgLt~~~---ae~~Scd 199 (270)
T KOG4627|consen 134 NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSN-----------TESGNDLGLTERN---AESVSCD 199 (270)
T ss_pred cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhC-----------CccccccCcccch---hhhcCcc
Confidence 55789999999999999866654 4448999999999999754321 1222210 0111 122333
Q ss_pred cccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHhc
Q 006375 559 VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 637 (648)
Q Consensus 559 ~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 637 (648)
+...+..+.| +||+.+++|.---++|.+.|+..++++. +.+++ +.+|+.... +......++..|+++.+
T Consensus 200 l~~~~~v~~~-ilVv~~~~espklieQnrdf~~q~~~a~----~~~f~---n~~hy~I~~--~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 200 LWEYTDVTVW-ILVVAAEHESPKLIEQNRDFADQLRKAS----FTLFK---NYDHYDIIE--ETAIDDSDVSRFLRNIE 268 (270)
T ss_pred HHHhcCceee-eeEeeecccCcHHHHhhhhHHHHhhhcc----eeecC---CcchhhHHH--HhccccchHHHHHHHHh
Confidence 3444555777 9999999998877999999999998754 34566 678864322 12223345677777643
No 116
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.18 E-value=9.3e-10 Score=98.64 Aligned_cols=217 Identities=15% Similarity=0.154 Sum_probs=133.8
Q ss_pred EEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhc
Q 006375 377 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 456 (648)
Q Consensus 377 ~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~ 456 (648)
..+.++...+.++-+. ++ ..+..-++|++||.-...........+..+...|+.++.+|++|.|+.-..++-
T Consensus 11 ~~ivi~n~~ne~lvg~-lh------~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~- 82 (269)
T KOG4667|consen 11 QKIVIPNSRNEKLVGL-LH------ETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY- 82 (269)
T ss_pred eEEEeccCCCchhhcc-ee------ccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-
Confidence 4445555555444442 21 124567999999943222222222334577778999999999999987666652
Q ss_pred ccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcc
Q 006375 457 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTA 536 (648)
Q Consensus 457 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~ 536 (648)
.+.....+|+..+++++... +..--+|+|||-||..+...+..+++ ++-+|..+|-.|.....- +.+.-...
T Consensus 83 ---Gn~~~eadDL~sV~q~~s~~---nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~-eRlg~~~l 154 (269)
T KOG4667|consen 83 ---GNYNTEADDLHSVIQYFSNS---NRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGIN-ERLGEDYL 154 (269)
T ss_pred ---CcccchHHHHHHHHHHhccC---ceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchh-hhhcccHH
Confidence 22223459999999999873 23345799999999999999998876 677788888777554331 11110011
Q ss_pred cc-c------------ccCCCCCHHHH-HHHHc-CCcc-ccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCC
Q 006375 537 EW-E------------EWGDPWKEEFY-FYMKS-YSPV-DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 600 (648)
Q Consensus 537 ~~-~------------~~g~~~~~~~~-~~~~~-~sp~-~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~ 600 (648)
+| . +|+.-+.++.. ..+.. .++. ..| .++|| ||-+||..|..||.+.+.+|++.+.. +
T Consensus 155 ~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkI-d~~C~-VLTvhGs~D~IVPve~AkefAk~i~n----H 228 (269)
T KOG4667|consen 155 ERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKI-DKQCR-VLTVHGSEDEIVPVEDAKEFAKIIPN----H 228 (269)
T ss_pred HHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCc-CccCc-eEEEeccCCceeechhHHHHHHhccC----C
Confidence 11 1 11111222221 11110 1111 123 23898 99999999999999999999888764 4
Q ss_pred CeEEEEecCCCCccCCCc
Q 006375 601 NILLFKCELGAGHFSKSG 618 (648)
Q Consensus 601 ~~~~~~~~~~~gH~~~~~ 618 (648)
++.+++ ++.|.....
T Consensus 229 ~L~iIE---gADHnyt~~ 243 (269)
T KOG4667|consen 229 KLEIIE---GADHNYTGH 243 (269)
T ss_pred ceEEec---CCCcCccch
Confidence 455554 999976443
No 117
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.17 E-value=1.6e-09 Score=105.36 Aligned_cols=204 Identities=19% Similarity=0.189 Sum_probs=121.1
Q ss_pred CCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHH-HcCCCC
Q 006375 405 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLI-KNCYCT 483 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~-~~~~~d 483 (648)
..+.+|++|| ||.+.. -|-..+..|+. ...|.++|..|-|...+.=-. ......-..+++.++.-. +.+.
T Consensus 89 ~~~plVliHG-yGAg~g-~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~----~d~~~~e~~fvesiE~WR~~~~L-- 159 (365)
T KOG4409|consen 89 NKTPLVLIHG-YGAGLG-LFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFS----IDPTTAEKEFVESIEQWRKKMGL-- 159 (365)
T ss_pred CCCcEEEEec-cchhHH-HHHHhhhhhhh-cCceEEecccCCCCCCCCCCC----CCcccchHHHHHHHHHHHHHcCC--
Confidence 3456788888 443322 24444556666 899999999988865543111 222233456777776444 4443
Q ss_pred CCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCC----C---------------CCCcccc-cccC-
Q 006375 484 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPT----I---------------PLTTAEW-EEWG- 542 (648)
Q Consensus 484 ~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~----~---------------~~~~~~~-~~~g- 542 (648)
.++.|+|||+||+|+..+|..+|++++.+|+..|.-=..+...++. . |+....+ .-||
T Consensus 160 -~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp 238 (365)
T KOG4409|consen 160 -EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGP 238 (365)
T ss_pred -cceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccch
Confidence 6999999999999999999999999999999988532211100000 0 0000000 0011
Q ss_pred ---------------------------------CCCCHHHHHHHHc-----CCc-cccCCCC--CCCeEEEeecCCCCcc
Q 006375 543 ---------------------------------DPWKEEFYFYMKS-----YSP-VDNVKAQ--NYPHILVTAGLNDPRV 581 (648)
Q Consensus 543 ---------------------------------~~~~~~~~~~~~~-----~sp-~~~~~~~--~~P~~li~~g~~D~~v 581 (648)
+|..+..+..|.+ -.| +++++.. ++| +++++|++|..
T Consensus 239 ~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~p-v~fiyG~~dWm- 316 (365)
T KOG4409|consen 239 KLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVP-VTFIYGDRDWM- 316 (365)
T ss_pred HHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCC-EEEEecCcccc-
Confidence 1111122222211 112 2344444 488 99999999974
Q ss_pred CCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHH
Q 006375 582 MYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLRE 625 (648)
Q Consensus 582 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 625 (648)
...-+.++...+. ...++.+.++ ++||..-.++++.+++
T Consensus 317 D~~~g~~~~~~~~--~~~~~~~~v~---~aGHhvylDnp~~Fn~ 355 (365)
T KOG4409|consen 317 DKNAGLEVTKSLM--KEYVEIIIVP---GAGHHVYLDNPEFFNQ 355 (365)
T ss_pred cchhHHHHHHHhh--cccceEEEec---CCCceeecCCHHHHHH
Confidence 5566667766663 3345556665 9999877777777776
No 118
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.17 E-value=8.5e-11 Score=104.58 Aligned_cols=210 Identities=18% Similarity=0.252 Sum_probs=128.5
Q ss_pred eEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCc--hhHHHHHH-CCCEEEEEcc--CCCCCCCh--hh------
Q 006375 387 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN--SSRLSLLD-RGFIFAIAQI--RGGGELGR--QW------ 453 (648)
Q Consensus 387 ~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~--~~~~~l~~-~G~~v~~~~~--rG~g~~g~--~~------ 453 (648)
..+..-++.|++. ..+++.|++.++.|-... ...|. ..++..++ .|.+|+.||- ||-.--|. +|
T Consensus 26 c~Mtf~vylPp~a-~~~k~~P~lf~LSGLTCT--~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GA 102 (283)
T KOG3101|consen 26 CSMTFGVYLPPDA-PRGKRCPVLFYLSGLTCT--HENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGA 102 (283)
T ss_pred cceEEEEecCCCc-ccCCcCceEEEecCCccc--chhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCc
Confidence 4455566778775 455669999999984322 22222 22344444 5999999985 66332221 22
Q ss_pred --hhcccccCCCCcHhHHHHHHHHHHH-----cCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccc
Q 006375 454 --YENGKFLKKKNTFTDFIACAEYLIK-----NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 526 (648)
Q Consensus 454 --~~~~~~~~~~~~~~D~~~~~~~l~~-----~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~ 526 (648)
+-....+.-.+.+.-...+++.|.+ .-.+|+.+++|.||||||+-|+....++|.+++.+-+.+|++++..
T Consensus 103 GFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~-- 180 (283)
T KOG3101|consen 103 GFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPIN-- 180 (283)
T ss_pred eeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCccc--
Confidence 2111111111223333444444433 2358999999999999999998888899999999999999998764
Q ss_pred cCCCCCCCccccccc-CCCCCHHHHHHHHcCCccccCCCC---CCCeEEEeecCCCCccC-CchHHHHHHHHHhcCCCCC
Q 006375 527 LDPTIPLTTAEWEEW-GDPWKEEFYFYMKSYSPVDNVKAQ---NYPHILVTAGLNDPRVM-YSEPAKFVAKLREMKTDDN 601 (648)
Q Consensus 527 ~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~~~~~---~~P~~li~~g~~D~~v~-~~~~~~~~~~l~~~~~~~~ 601 (648)
.|+....+.-| |+ ++..+ ..|++-+-|++. .. .+||-+|..|...+ ---+..+.++..+. ...
T Consensus 181 ----cpWGqKAf~gYLG~--~ka~W---~~yDat~lik~y~~~~~-~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~--~~~ 248 (283)
T KOG3101|consen 181 ----CPWGQKAFTGYLGD--NKAQW---EAYDATHLIKNYRGVGD-DILIDQGAADNFLAEQLLPENLLEACKAT--WQA 248 (283)
T ss_pred ----CcchHHHhhcccCC--ChHHH---hhcchHHHHHhcCCCCc-cEEEecCccchhhhhhcChHHHHHHhhcc--ccc
Confidence 34444444333 43 44443 556665545444 23 49999999999866 22344555555433 223
Q ss_pred eEEEEecCCCCc
Q 006375 602 ILLFKCELGAGH 613 (648)
Q Consensus 602 ~~~~~~~~~~gH 613 (648)
+++++..++-.|
T Consensus 249 ~v~~r~~~gyDH 260 (283)
T KOG3101|consen 249 PVVFRLQEGYDH 260 (283)
T ss_pred cEEEEeecCCCc
Confidence 577776667777
No 119
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.16 E-value=6.2e-10 Score=115.26 Aligned_cols=106 Identities=14% Similarity=0.103 Sum_probs=75.8
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCC
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 485 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 485 (648)
.|.||++||...... .|...+..|. .+|.|+++|+||.|.....-.. ......++++...+..++++- ..+
T Consensus 127 ~~~ivllHG~~~~~~--~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~~----~~~~ys~~~~a~~l~~~i~~l--~~~ 197 (383)
T PLN03084 127 NPPVLLIHGFPSQAY--SYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQPG----YGFNYTLDEYVSSLESLIDEL--KSD 197 (383)
T ss_pred CCeEEEECCCCCCHH--HHHHHHHHHh-cCCEEEEECCCCCCCCCCCccc----ccccCCHHHHHHHHHHHHHHh--CCC
Confidence 578999999654332 3555555554 5899999999998865332110 011245667666666665542 236
Q ss_pred eEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 006375 486 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 520 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~ 520 (648)
++.++|+|+||.++..++.++|++++++|+.+|..
T Consensus 198 ~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 198 KVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred CceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 89999999999999999999999999999888764
No 120
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.15 E-value=3.8e-11 Score=118.51 Aligned_cols=136 Identities=18% Similarity=0.220 Sum_probs=89.7
Q ss_pred CeEEeEEEEEeeCccccCCCCcEEEEecCC-CCCCCCCCCchhHHHHHHCC----CEEEEEccCCCCCCChhhhhc----
Q 006375 386 GTQIPICIVYRKNLVKLDGSDPLLLYGYGS-YEICNDPAFNSSRLSLLDRG----FIFAIAQIRGGGELGRQWYEN---- 456 (648)
Q Consensus 386 g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg-~~~~~~~~~~~~~~~l~~~G----~~v~~~~~rG~g~~g~~~~~~---- 456 (648)
|....++++.|++. ...+++|+|++.||. .... ..........+++.| .++++++.-+.......|...
T Consensus 5 g~~~~~~VylP~~y-~~~~~~PvlylldG~~~~~~-~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~ 82 (251)
T PF00756_consen 5 GRDRRVWVYLPPGY-DPSKPYPVLYLLDGQSGWFR-NGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSS 82 (251)
T ss_dssp TEEEEEEEEECTTG-GTTTTEEEEEEESHTTHHHH-HHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTT
T ss_pred CCeEEEEEEECCCC-CCCCCCEEEEEccCCccccc-cchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccc
Confidence 66788999999997 677889999999994 1100 000111122344444 455555554444233334421
Q ss_pred --ccccCCCCcHhHHH--HHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccc
Q 006375 457 --GKFLKKKNTFTDFI--ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL 523 (648)
Q Consensus 457 --~~~~~~~~~~~D~~--~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~ 523 (648)
.....+...+.+++ +.+.++.++..+++.+.+|+|+||||+.++.++.++|++|.++++.+|.++..
T Consensus 83 ~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 83 RRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp CBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred cccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 01111112344544 56777777777777779999999999999999999999999999999987754
No 121
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.12 E-value=7.3e-09 Score=108.12 Aligned_cols=202 Identities=15% Similarity=0.111 Sum_probs=118.8
Q ss_pred EEEEEeCC-CCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCC----CEEEEEccCCCCCCCh
Q 006375 377 ERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRG----FIFAIAQIRGGGELGR 451 (648)
Q Consensus 377 ~~~~~~s~-~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G----~~v~~~~~rG~g~~g~ 451 (648)
+.+.+.|. -|.+..++++.|++. . .+++|+|+++||........ .......|+++| .+|+++|...+.....
T Consensus 181 ~~~~~~S~~Lg~~r~v~VY~P~~y-~-~~~~PvlyllDG~~w~~~~~-~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~ 257 (411)
T PRK10439 181 KEIIWKSERLGNSRRVWIYTTGDA-A-PEERPLAILLDGQFWAESMP-VWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQ 257 (411)
T ss_pred EEEEEEccccCCceEEEEEECCCC-C-CCCCCEEEEEECHHhhhcCC-HHHHHHHHHHcCCCCceEEEEECCCCcccccc
Confidence 44445443 466688888888876 4 46799999999976443222 122234666666 3467777532211111
Q ss_pred hhhhcccccCCCCcHhHHH--HHHHHHHHcC--CCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccccc
Q 006375 452 QWYENGKFLKKKNTFTDFI--ACAEYLIKNC--YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML 527 (648)
Q Consensus 452 ~~~~~~~~~~~~~~~~D~~--~~~~~l~~~~--~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~ 527 (648)
+. .....+.+++ ..+-++.++. ..|+++.+|+|.||||+.++.++.++|++|.++++.+|.+=+..
T Consensus 258 el-------~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~--- 327 (411)
T PRK10439 258 EL-------PCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPH--- 327 (411)
T ss_pred cC-------CchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCC---
Confidence 10 0011222221 2334444442 35889999999999999999999999999999999998531100
Q ss_pred CCCCCCCcccccccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEe
Q 006375 528 DPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 607 (648)
Q Consensus 528 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 607 (648)
.. +. ......+.+.+. ....... .++|.+|..|... +...+++.+.|+++|.++. +.+
T Consensus 328 --~~----------~~-~~~~l~~~l~~~----~~~~~~l-r~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~---~~~ 385 (411)
T PRK10439 328 --RG----------GQ-QEGVLLEQLKAG----EVSARGL-RIVLEAGRREPMI-MRANQALYAQLHPAGHSVF---WRQ 385 (411)
T ss_pred --cc----------CC-chhHHHHHHHhc----ccCCCCc-eEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEE---EEE
Confidence 00 00 011111222221 0111122 4999999998643 5678999999999987754 333
Q ss_pred cCCCCcc
Q 006375 608 ELGAGHF 614 (648)
Q Consensus 608 ~~~~gH~ 614 (648)
. .+||.
T Consensus 386 ~-~GGHd 391 (411)
T PRK10439 386 V-DGGHD 391 (411)
T ss_pred C-CCCcC
Confidence 3 45783
No 122
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.11 E-value=9.8e-10 Score=111.17 Aligned_cols=214 Identities=20% Similarity=0.249 Sum_probs=127.0
Q ss_pred CCCcEEEEecCCCCCCCCCCCchhHHHHHHC-CCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCC
Q 006375 404 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 482 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 482 (648)
...|.||++|| ++. ....|......|... |+.|.++|..|+|-.+ +... .......+....+..+......
T Consensus 56 ~~~~pvlllHG-F~~-~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s--~~~~----~~~y~~~~~v~~i~~~~~~~~~ 127 (326)
T KOG1454|consen 56 KDKPPVLLLHG-FGA-SSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSS--PLPR----GPLYTLRELVELIRRFVKEVFV 127 (326)
T ss_pred CCCCcEEEecc-ccC-CcccHhhhccccccccceEEEEEecCCCCcCC--CCCC----CCceehhHHHHHHHHHHHhhcC
Confidence 35688999999 343 334455555555544 6999999999855211 1111 1114556777777766665443
Q ss_pred CCCeEEEEeeChhHHHHHHHHhhCCCceeEEE---ecCCcccccccc-------cC----C---CCCC---Cccc-cc--
Q 006375 483 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV---AAVPFVDVLTTM-------LD----P---TIPL---TTAE-WE-- 539 (648)
Q Consensus 483 d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v---~~~~~~d~~~~~-------~~----~---~~~~---~~~~-~~-- 539 (648)
.++.++|+|+||+++..+|+.+|+.++.+| +..+........ .+ . ..|. .... |.
T Consensus 128 --~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 205 (326)
T KOG1454|consen 128 --EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEG 205 (326)
T ss_pred --cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHh
Confidence 459999999999999999999999999998 444433211110 00 0 0000 0000 00
Q ss_pred -------ccCCC-CCHHHHHH------------------HHc-----CCccccCCCCC-CCeEEEeecCCCCccCCchHH
Q 006375 540 -------EWGDP-WKEEFYFY------------------MKS-----YSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPA 587 (648)
Q Consensus 540 -------~~g~~-~~~~~~~~------------------~~~-----~sp~~~~~~~~-~P~~li~~g~~D~~v~~~~~~ 587 (648)
.+.++ ...+.... +.. ......++++. +| +||++|+.|+.+|.+.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p-vlii~G~~D~~~p~~~~~ 284 (326)
T KOG1454|consen 206 LLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCP-VLIIWGDKDQIVPLELAE 284 (326)
T ss_pred hhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCc-eEEEEcCcCCccCHHHHH
Confidence 00111 01111000 000 12234566664 98 999999999999998777
Q ss_pred HHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHhc
Q 006375 588 KFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 637 (648)
Q Consensus 588 ~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 637 (648)
++.+++ -..++.+++ ++||....++++.... .+..|+.++.
T Consensus 285 ~~~~~~----pn~~~~~I~---~~gH~~h~e~Pe~~~~--~i~~Fi~~~~ 325 (326)
T KOG1454|consen 285 ELKKKL----PNAELVEIP---GAGHLPHLERPEEVAA--LLRSFIARLR 325 (326)
T ss_pred HHHhhC----CCceEEEeC---CCCcccccCCHHHHHH--HHHHHHHHhc
Confidence 776666 223455554 8999877777765554 5678887653
No 123
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.11 E-value=2.2e-09 Score=130.65 Aligned_cols=235 Identities=14% Similarity=0.082 Sum_probs=132.1
Q ss_pred EeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhH
Q 006375 389 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTD 468 (648)
Q Consensus 389 i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D 468 (648)
+..++.+.... .....|.||++||..+... .|...+..|. .+|.|+++|.||.|.....-............+++
T Consensus 1356 ~~~~i~~~~~G--~~~~~~~vVllHG~~~s~~--~w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~ 1430 (1655)
T PLN02980 1356 FSCLIKVHEVG--QNAEGSVVLFLHGFLGTGE--DWIPIMKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVEL 1430 (1655)
T ss_pred eEEEEEEEecC--CCCCCCeEEEECCCCCCHH--HHHHHHHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHH
Confidence 55554443322 1223579999999665543 3555555554 57999999999988653210000000111235667
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccc-------cCCC----C-CCCcc
Q 006375 469 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM-------LDPT----I-PLTTA 536 (648)
Q Consensus 469 ~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~-------~~~~----~-~~~~~ 536 (648)
+.+.+..++++ .+.+++.++|+||||.+++.++.++|++++++|+.++...+.... .... + .....
T Consensus 1431 ~a~~l~~ll~~--l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 1508 (1655)
T PLN02980 1431 VADLLYKLIEH--ITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLE 1508 (1655)
T ss_pred HHHHHHHHHHH--hCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHH
Confidence 77666655554 234789999999999999999999999999998876532211000 0000 0 00000
Q ss_pred cc-cccCC------C-CCHHH----------------HHHHHcCC------ccccCCCCCCCeEEEeecCCCCccCCchH
Q 006375 537 EW-EEWGD------P-WKEEF----------------YFYMKSYS------PVDNVKAQNYPHILVTAGLNDPRVMYSEP 586 (648)
Q Consensus 537 ~~-~~~g~------~-~~~~~----------------~~~~~~~s------p~~~~~~~~~P~~li~~g~~D~~v~~~~~ 586 (648)
.+ ..|.. . ..+.. ...+.... -...+.++++| +|+++|++|..++ ..+
T Consensus 1509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~P-tLlI~Ge~D~~~~-~~a 1586 (1655)
T PLN02980 1509 IFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTP-LLLVVGEKDVKFK-QIA 1586 (1655)
T ss_pred HHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCC-EEEEEECCCCccH-HHH
Confidence 00 00100 0 00100 00111111 11335667888 9999999998764 667
Q ss_pred HHHHHHHHhcCC--------CCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHhc
Q 006375 587 AKFVAKLREMKT--------DDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 637 (648)
Q Consensus 587 ~~~~~~l~~~~~--------~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 637 (648)
.++.+.+..... ..++++++ ++||....++++.+.+ .+..||.+.-
T Consensus 1587 ~~~~~~i~~a~~~~~~~~~~~a~lvvI~---~aGH~~~lE~Pe~f~~--~I~~FL~~~~ 1640 (1655)
T PLN02980 1587 QKMYREIGKSKESGNDKGKEIIEIVEIP---NCGHAVHLENPLPVIR--ALRKFLTRLH 1640 (1655)
T ss_pred HHHHHHccccccccccccccceEEEEEC---CCCCchHHHCHHHHHH--HHHHHHHhcc
Confidence 777776654210 13456665 8999876666665444 4567887643
No 124
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.09 E-value=1.2e-09 Score=113.27 Aligned_cols=225 Identities=15% Similarity=0.172 Sum_probs=128.1
Q ss_pred CCCcEEEEecCCCCCCCC----------CCC-chhH---HHHHHCCCEEEEEccCCCCC--------CChhhhhc--cc-
Q 006375 404 GSDPLLLYGYGSYEICND----------PAF-NSSR---LSLLDRGFIFAIAQIRGGGE--------LGRQWYEN--GK- 458 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~----------~~~-~~~~---~~l~~~G~~v~~~~~rG~g~--------~g~~~~~~--~~- 458 (648)
.+.++||+.|+-.+.+.. ++| ...+ ..+=..-|-|+++|+-|++. .|..-... |.
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 345899999984442211 111 1111 12223569999999998752 22111111 11
Q ss_pred --ccCCCCcHhHHHHHHHHHHHcCCCCCCeEE-EEeeChhHHHHHHHHhhCCCceeEEEecCCcc--ccc------c---
Q 006375 459 --FLKKKNTFTDFIACAEYLIKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV--DVL------T--- 524 (648)
Q Consensus 459 --~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~--d~~------~--- 524 (648)
......+++|+.+++..+++.-.+ .++. ++|+||||.+++.++.++|++++.+|+.+... +.. .
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~ 211 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWA 211 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHH
Confidence 012336789999888888765333 5775 99999999999999999999999988775421 111 0
Q ss_pred --cccCCC----------CCC--------------Ccccc--cccCCC-------------------------------C
Q 006375 525 --TMLDPT----------IPL--------------TTAEW--EEWGDP-------------------------------W 545 (648)
Q Consensus 525 --~~~~~~----------~~~--------------~~~~~--~~~g~~-------------------------------~ 545 (648)
...++. .|. ...+| ..++.. .
T Consensus 212 ~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~ 291 (389)
T PRK06765 212 EAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELV 291 (389)
T ss_pred HHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhcc
Confidence 001110 010 00000 011110 0
Q ss_pred CHHHHHH----HHcC-------CccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCcc
Q 006375 546 KEEFYFY----MKSY-------SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 614 (648)
Q Consensus 546 ~~~~~~~----~~~~-------sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~ 614 (648)
++..+-+ +..+ +....+.++++| +|+++|+.|..+|+.+++++.+.+...+...++++++ ..+||.
T Consensus 292 Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~P-tLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~--s~~GH~ 368 (389)
T PRK06765 292 DANHWLYLAKAVQLFDAGHGFSSLEEALSNIEAN-VLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIE--SINGHM 368 (389)
T ss_pred ChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCC-EEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEEC--CCCCcc
Confidence 0111101 1111 122234567888 9999999999999999999998887655455555554 237997
Q ss_pred CCCchHHHHHHHHHHHHHHHH
Q 006375 615 SKSGRFERLREAAFTYTFLMR 635 (648)
Q Consensus 615 ~~~~~~~~~~~~~~~~~fl~~ 635 (648)
......+.+.. .+.+||.+
T Consensus 369 ~~le~p~~~~~--~I~~FL~~ 387 (389)
T PRK06765 369 AGVFDIHLFEK--KIYEFLNR 387 (389)
T ss_pred hhhcCHHHHHH--HHHHHHcc
Confidence 66555554444 34677754
No 125
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.04 E-value=5.3e-10 Score=121.80 Aligned_cols=129 Identities=18% Similarity=0.116 Sum_probs=90.9
Q ss_pred EeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHC-C-CEEEEEccC-CCCCCChhhhhcccccCCCCc
Q 006375 389 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-G-FIFAIAQIR-GGGELGRQWYENGKFLKKKNT 465 (648)
Q Consensus 389 i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G-~~v~~~~~r-G~g~~g~~~~~~~~~~~~~~~ 465 (648)
+.+.++.|... ...++.|+||++|||.......... ....|+.+ + ++|+.+||| |..|+...-.. ....-..
T Consensus 79 l~l~i~~p~~~-~~~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~~~n~g 153 (493)
T cd00312 79 LYLNVYTPKNT-KPGNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---ELPGNYG 153 (493)
T ss_pred CeEEEEeCCCC-CCCCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCC---CCCcchh
Confidence 55666667543 3356789999999986544433332 23455554 3 999999999 66566432211 1122245
Q ss_pred HhHHHHHHHHHHHc---CCCCCCeEEEEeeChhHHHHHHHHhh--CCCceeEEEecCCcccc
Q 006375 466 FTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPFVDV 522 (648)
Q Consensus 466 ~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~~~a~v~~~~~~d~ 522 (648)
+.|+.+|++|+.++ ...||++|.|+|+|+||.++..++.. .+.+|+++|+.+|....
T Consensus 154 ~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 154 LKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 89999999999876 24799999999999999999888876 24589999999886653
No 126
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.02 E-value=3.6e-09 Score=96.04 Aligned_cols=183 Identities=16% Similarity=0.178 Sum_probs=118.6
Q ss_pred EEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCC--CC------hhhhhcccccCCCCcHhHHHHHHHHHHHc
Q 006375 408 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE--LG------RQWYENGKFLKKKNTFTDFIACAEYLIKN 479 (648)
Q Consensus 408 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~--~g------~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 479 (648)
+||.+---+|.+... -...+-.++..||.|++||+-.|.- .+ ..|.+ +......+.|+.+.++||..+
T Consensus 41 ~li~i~DvfG~~~~n-~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~---~~~~~~~~~~i~~v~k~lk~~ 116 (242)
T KOG3043|consen 41 VLIVIQDVFGFQFPN-TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMK---GHSPPKIWKDITAVVKWLKNH 116 (242)
T ss_pred EEEEEEeeeccccHH-HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHh---cCCcccchhHHHHHHHHHHHc
Confidence 556555444432211 1223456677799999999854411 11 12332 234446789999999999977
Q ss_pred CCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHHHHHHHHcCCcc
Q 006375 480 CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPV 559 (648)
Q Consensus 480 ~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~ 559 (648)
+ ++.+|+++|.++||-++..+.+..| .|.|+|+..|.. .+.+
T Consensus 117 g--~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~------------------------~d~~----------- 158 (242)
T KOG3043|consen 117 G--DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF------------------------VDSA----------- 158 (242)
T ss_pred C--CcceeeEEEEeecceEEEEeeccch-hheeeeEecCCc------------------------CChh-----------
Confidence 6 4689999999999998888777776 688888777621 0111
Q ss_pred ccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCC-CCeEEEEecCCCCccCCC-------ch-HHHHHH-HHHH
Q 006375 560 DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD-DNILLFKCELGAGHFSKS-------GR-FERLRE-AAFT 629 (648)
Q Consensus 560 ~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~gH~~~~-------~~-~~~~~~-~~~~ 629 (648)
.+..+++| +|++.|+.|..||+.....+-+++.....- +++.+| ++.+|+... +. ....++ ..+.
T Consensus 159 -D~~~vk~P-ilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f---~g~~HGf~~~r~~~~~Ped~~~~eea~~~~ 233 (242)
T KOG3043|consen 159 -DIANVKAP-ILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTF---SGVGHGFVARRANISSPEDKKAAEEAYQRF 233 (242)
T ss_pred -HHhcCCCC-EEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEc---CCccchhhhhccCCCChhHHHHHHHHHHHH
Confidence 12344577 999999999999999888888888765432 234444 488886542 11 112222 3456
Q ss_pred HHHHHHhc
Q 006375 630 YTFLMRAL 637 (648)
Q Consensus 630 ~~fl~~~l 637 (648)
..||.+++
T Consensus 234 ~~Wf~~y~ 241 (242)
T KOG3043|consen 234 ISWFKHYL 241 (242)
T ss_pred HHHHHHhh
Confidence 78887765
No 127
>COG0627 Predicted esterase [General function prediction only]
Probab=99.01 E-value=5.3e-09 Score=104.03 Aligned_cols=225 Identities=16% Similarity=0.159 Sum_probs=135.0
Q ss_pred CCCCcEEEEecCCCCCCCC-CCCchhHHHHHHCCCEEEEEccC--------------CCC-CCChhhhhcccccCCCCcH
Q 006375 403 DGSDPLLLYGYGSYEICND-PAFNSSRLSLLDRGFIFAIAQIR--------------GGG-ELGRQWYENGKFLKKKNTF 466 (648)
Q Consensus 403 ~~~~P~vl~~hGg~~~~~~-~~~~~~~~~l~~~G~~v~~~~~r--------------G~g-~~g~~~~~~~~~~~~~~~~ 466 (648)
+.+.|++++.||--..... ..+..........|++++.+|.. |++ ++=.+|.+...... ...+
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~-~~q~ 129 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASG-PYQW 129 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccC-ccch
Confidence 4567888888884322111 11122222334458888887432 332 33334443321111 2344
Q ss_pred hHHHHH--HHHHHHcCCCCC--CeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCC---CCCCCcccc-
Q 006375 467 TDFIAC--AEYLIKNCYCTK--EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP---TIPLTTAEW- 538 (648)
Q Consensus 467 ~D~~~~--~~~l~~~~~~d~--~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~---~~~~~~~~~- 538 (648)
++++.- -..+.+...++. ++.+|+|+||||+-|+.+|+.+|++|+.+.+.+|+++....+... ..++....+
T Consensus 130 ~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~ 209 (316)
T COG0627 130 ETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFN 209 (316)
T ss_pred hHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccHH
Confidence 555532 112233344454 389999999999999999999999999999999999977544322 111111111
Q ss_pred cccCCCCCHHHHHHHHcCCccccCCC---C----------CCCeEEEeecCCCCccC--CchHHHHHHHHHhcCCCCCeE
Q 006375 539 EEWGDPWKEEFYFYMKSYSPVDNVKA---Q----------NYPHILVTAGLNDPRVM--YSEPAKFVAKLREMKTDDNIL 603 (648)
Q Consensus 539 ~~~g~~~~~~~~~~~~~~sp~~~~~~---~----------~~P~~li~~g~~D~~v~--~~~~~~~~~~l~~~~~~~~~~ 603 (648)
..||.+.++ .++.++|..++.+ . .-|++++-+|..|.... ...++++.+++++++.+..+.
T Consensus 210 ~~~G~~~~~----~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~ 285 (316)
T COG0627 210 AMLGPDSDP----AWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVR 285 (316)
T ss_pred HhcCCCccc----cccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceee
Confidence 234544332 2356677666654 1 33569999999998764 445889999999999887533
Q ss_pred EEEecCCCCccCCCchHHHHH-HHHHHHHHHHHhcCCC
Q 006375 604 LFKCELGAGHFSKSGRFERLR-EAAFTYTFLMRALSML 640 (648)
Q Consensus 604 ~~~~~~~~gH~~~~~~~~~~~-~~~~~~~fl~~~l~~~ 640 (648)
.. ++..|. ...++ .+.+.+.|+...|++.
T Consensus 286 ~~---~~G~Hs-----w~~w~~~l~~~~~~~a~~l~~~ 315 (316)
T COG0627 286 DQ---PGGDHS-----WYFWASQLADHLPWLAGALGLA 315 (316)
T ss_pred eC---CCCCcC-----HHHHHHHHHHHHHHHHHHhccC
Confidence 33 467773 22233 3557789999998864
No 128
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.94 E-value=5.7e-09 Score=99.50 Aligned_cols=115 Identities=19% Similarity=0.244 Sum_probs=86.9
Q ss_pred EeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhH
Q 006375 389 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTD 468 (648)
Q Consensus 389 i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D 468 (648)
.|..+++|++. +.+|+||+.||- ...... |......+++.||+|+.++...-.. .......++
T Consensus 4 ~~l~v~~P~~~----g~yPVv~f~~G~-~~~~s~-Ys~ll~hvAShGyIVV~~d~~~~~~-----------~~~~~~~~~ 66 (259)
T PF12740_consen 4 KPLLVYYPSSA----GTYPVVLFLHGF-LLINSW-YSQLLEHVASHGYIVVAPDLYSIGG-----------PDDTDEVAS 66 (259)
T ss_pred CCeEEEecCCC----CCcCEEEEeCCc-CCCHHH-HHHHHHHHHhCceEEEEecccccCC-----------CCcchhHHH
Confidence 35667888765 789999999994 333222 6677789999999999999553221 111235678
Q ss_pred HHHHHHHHHHc---C-----CCCCCeEEEEeeChhHHHHHHHHhhC-----CCceeEEEecCCcc
Q 006375 469 FIACAEYLIKN---C-----YCTKEKLCIEGRSAGGLLIGAVLNMR-----PDLFKAAVAAVPFV 520 (648)
Q Consensus 469 ~~~~~~~l~~~---~-----~~d~~~i~i~G~S~GG~l~~~~~~~~-----p~~~~a~v~~~~~~ 520 (648)
+.+.++||.+. . ..|-.||+|+|||.||-++.+++.++ +.+|+++|+..|+-
T Consensus 67 ~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 67 AAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 88899998763 1 25889999999999999999888876 45899999999974
No 129
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.93 E-value=2.2e-06 Score=86.05 Aligned_cols=203 Identities=14% Similarity=0.043 Sum_probs=106.6
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecccc-C-ccceeEEecCC-eEEEEEeCCCCCCceEEEEECCC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV-G-VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~-~-~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
....|++||++|.|..+..| ..++|.+||++++.++.+.. + ...+..++|++ .++|.... ..|++++|.+
T Consensus 39 ~~~~ft~dG~kllF~s~~dg--~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~-----~~l~~vdL~T 111 (386)
T PF14583_consen 39 YQNCFTDDGRKLLFASDFDG--NRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNG-----RSLRRVDLDT 111 (386)
T ss_dssp TS--B-TTS-EEEEEE-TTS--S-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETT-----TEEEEEETTT
T ss_pred cCCCcCCCCCEEEEEeccCC--CcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECC-----CeEEEEECCc
Confidence 35688999999999999887 58999999999999876532 1 22348899999 99887632 4699999999
Q ss_pred CCCCcEEEEeecCCCeEEEEEe--CCCCcEEEEEEcc-------------------ccccEEEEEECCCCCceeEeeecc
Q 006375 161 DQSNDICLYHEKDDIYSLGLQA--SESKKFLFIASES-------------------KITRFVFYLDVSKPEELRVLTPRV 219 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~--s~Dg~~l~~~~~~-------------------~~~~~l~~~dl~~~~~~~~l~~~~ 219 (648)
. +..+||+.++ .|.....| ..|++.++..... ...+.|+.+|+.+++ .+.+....
T Consensus 112 ~--e~~~vy~~p~-~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~-~~~v~~~~ 187 (386)
T PF14583_consen 112 L--EERVVYEVPD-DWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGE-RKVVFEDT 187 (386)
T ss_dssp ----EEEEEE--T-TEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT---EEEEEEES
T ss_pred C--cEEEEEECCc-ccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCc-eeEEEecC
Confidence 7 5668887764 34322333 5678876543221 123589999999998 77666544
Q ss_pred cce-eeeEeecCCEEEEEeccCCC--CCcEEEEEeCCCCCcceeEecCCCC--cccceEEEeCCEEEEEEecCCeeEEEE
Q 006375 220 VGV-DTAASHRGNHFFITRRSDEL--FNSELLACPVDNTSETTVLIPHRES--VKLQDIQLFIDHLAVYEREGGLQKITT 294 (648)
Q Consensus 220 ~~~-~~~~s~dg~~l~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~l~v 294 (648)
... ...+||....++.-...+.. -..+++.++.++. ..+.+..+.+. ..-+.|.+++..+++.....+....++
T Consensus 188 ~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~-~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i 266 (386)
T PF14583_consen 188 DWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGS-NVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWI 266 (386)
T ss_dssp S-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS----EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEE
T ss_pred ccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCC-cceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEE
Confidence 432 24467755444444443222 2358999998763 23223333222 122345566677766544333333444
Q ss_pred EEcC
Q 006375 295 YRLP 298 (648)
Q Consensus 295 ~~~~ 298 (648)
..++
T Consensus 267 ~~~d 270 (386)
T PF14583_consen 267 AGYD 270 (386)
T ss_dssp EEE-
T ss_pred EeeC
Confidence 4444
No 130
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.93 E-value=2.6e-09 Score=108.87 Aligned_cols=126 Identities=19% Similarity=0.232 Sum_probs=88.5
Q ss_pred EeEEEEEeeCccccCCCCcEEEEecCCC---CCCCCCCCchhHHHHHHCC-CEEEEEccCCCC-CCChhhhhcc--cccC
Q 006375 389 IPICIVYRKNLVKLDGSDPLLLYGYGSY---EICNDPAFNSSRLSLLDRG-FIFAIAQIRGGG-ELGRQWYENG--KFLK 461 (648)
Q Consensus 389 i~~~l~~~~~~~~~~~~~P~vl~~hGg~---~~~~~~~~~~~~~~l~~~G-~~v~~~~~rG~g-~~g~~~~~~~--~~~~ 461 (648)
+.+.+..|.. ..++.|++||+|||. |++..+.++ -..|+.+| ++|+.+|||-+- || -++.... ....
T Consensus 80 L~LNIwaP~~---~a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGf-L~~~~~~~~~~~~ 153 (491)
T COG2272 80 LYLNIWAPEV---PAEKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGF-LDLSSLDTEDAFA 153 (491)
T ss_pred eeEEeeccCC---CCCCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCccccccee-eehhhcccccccc
Confidence 4455555651 235689999999973 333334344 46788888 999999999543 43 1222221 1111
Q ss_pred CCCcHhHHHHHHHHHHHc---CCCCCCeEEEEeeChhHHHHHHHHhhCCC---ceeEEEecCCccc
Q 006375 462 KKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVD 521 (648)
Q Consensus 462 ~~~~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~~~a~v~~~~~~d 521 (648)
.-..+.|++.|++|+.++ -.-||++|.|+|.|+|++.++.+++. |. +|+.+|+.+|.+-
T Consensus 154 ~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 154 SNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 115789999999999876 44699999999999999998888884 65 7888898888654
No 131
>PRK05855 short chain dehydrogenase; Validated
Probab=98.93 E-value=1.5e-08 Score=113.13 Aligned_cols=107 Identities=13% Similarity=0.126 Sum_probs=66.4
Q ss_pred eCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccC
Q 006375 382 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK 461 (648)
Q Consensus 382 ~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~ 461 (648)
...+|.+|..... + +.+.|+||++||..+... .|......| .+||.|+++|+||.|...... ..
T Consensus 8 ~~~~g~~l~~~~~---g----~~~~~~ivllHG~~~~~~--~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~------~~ 71 (582)
T PRK05855 8 VSSDGVRLAVYEW---G----DPDRPTVVLVHGYPDNHE--VWDGVAPLL-ADRFRVVAYDVRGAGRSSAPK------RT 71 (582)
T ss_pred EeeCCEEEEEEEc---C----CCCCCeEEEEcCCCchHH--HHHHHHHHh-hcceEEEEecCCCCCCCCCCC------cc
Confidence 3457777765421 1 123589999999754432 355555555 679999999999988654221 11
Q ss_pred CCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhh
Q 006375 462 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 505 (648)
Q Consensus 462 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 505 (648)
...+++++.+.+..+++.-.. +.++.++|+||||.++..++.+
T Consensus 72 ~~~~~~~~a~dl~~~i~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 72 AAYTLARLADDFAAVIDAVSP-DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred cccCHHHHHHHHHHHHHHhCC-CCcEEEEecChHHHHHHHHHhC
Confidence 123445555555544443111 2349999999999888777665
No 132
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.92 E-value=1.2e-08 Score=94.00 Aligned_cols=182 Identities=19% Similarity=0.157 Sum_probs=97.8
Q ss_pred EEEEecCCCCCCCCCCCchhHHHHHHCC--CEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCC
Q 006375 408 LLLYGYGSYEICNDPAFNSSRLSLLDRG--FIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 485 (648)
Q Consensus 408 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G--~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 485 (648)
.|+|+||--.+..+.........+.+.+ ..+..+|.. ...++..+.++.++++. .++
T Consensus 1 ~ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------------~~p~~a~~~l~~~i~~~--~~~ 59 (187)
T PF05728_consen 1 MILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------------PFPEEAIAQLEQLIEEL--KPE 59 (187)
T ss_pred CeEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------------cCHHHHHHHHHHHHHhC--CCC
Confidence 4899999332222221222234566655 445566544 22356666777776653 334
Q ss_pred eEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCC--CCHHHHHHHHcCCccccCC
Q 006375 486 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP--WKEEFYFYMKSYSPVDNVK 563 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~sp~~~~~ 563 (648)
.++++|.|+||+.|..++.+++ +++ |+.+|.+.+...+.. .+. ......++.. ..+.....++++.... +.
T Consensus 60 ~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~-~iG--~~~~~~~~e~~~~~~~~~~~l~~l~~~~-~~ 132 (187)
T PF05728_consen 60 NVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQD-YIG--EQTNPYTGESYELTEEHIEELKALEVPY-PT 132 (187)
T ss_pred CeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHH-hhC--ccccCCCCccceechHhhhhcceEeccc-cC
Confidence 5999999999999999998875 444 888888876654321 110 0000111211 1222222222221111 11
Q ss_pred CCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHH
Q 006375 564 AQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFL 633 (648)
Q Consensus 564 ~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 633 (648)
... ++++++++.|.++++.++.+.++.. ..++. .+++|.... .+ +.+..+.+|+
T Consensus 133 -~~~-~~lvll~~~DEvLd~~~a~~~~~~~-------~~~i~---~ggdH~f~~--f~--~~l~~i~~f~ 186 (187)
T PF05728_consen 133 -NPE-RYLVLLQTGDEVLDYREAVAKYRGC-------AQIIE---EGGDHSFQD--FE--EYLPQIIAFL 186 (187)
T ss_pred -CCc-cEEEEEecCCcccCHHHHHHHhcCc-------eEEEE---eCCCCCCcc--HH--HHHHHHHHhh
Confidence 123 4999999999999986665555321 12333 378996532 21 1233456776
No 133
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.90 E-value=3.3e-08 Score=105.67 Aligned_cols=108 Identities=16% Similarity=0.051 Sum_probs=72.4
Q ss_pred cEEEEecCCCCCCCCCCC---chhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCC
Q 006375 407 PLLLYGYGSYEICNDPAF---NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 483 (648)
Q Consensus 407 P~vl~~hGg~~~~~~~~~---~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 483 (648)
+-||++||......-... ......|+++||.|+++|.||.|...+.+. ......+++.++++++.+. ..
T Consensus 189 ~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~------~ddY~~~~i~~al~~v~~~--~g 260 (532)
T TIGR01838 189 TPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT------FDDYIRDGVIAALEVVEAI--TG 260 (532)
T ss_pred CcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC------hhhhHHHHHHHHHHHHHHh--cC
Confidence 457777874332221111 245678899999999999999875433321 1123345688889998864 35
Q ss_pred CCeEEEEeeChhHHHHH----HHHhhC-CCceeEEEecCCcccc
Q 006375 484 KEKLCIEGRSAGGLLIG----AVLNMR-PDLFKAAVAAVPFVDV 522 (648)
Q Consensus 484 ~~~i~i~G~S~GG~l~~----~~~~~~-p~~~~a~v~~~~~~d~ 522 (648)
.+++.++|+|+||.+++ .++... |++++++++.+..+|.
T Consensus 261 ~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 261 EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDF 304 (532)
T ss_pred CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCC
Confidence 58999999999999852 234444 7788988877776664
No 134
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.88 E-value=1.6e-07 Score=87.86 Aligned_cols=145 Identities=15% Similarity=0.143 Sum_probs=91.8
Q ss_pred eeEEeCCCCCEEEEEEeC----CC---CeEEEEEEEECCCCCeeeccc--cCccceeEEecCC-eEEEEEeCCCCCCceE
Q 006375 84 GCFQVSPDNKLVAYAEDT----KG---DEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE-ALVYITMDEILRPDKA 153 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~----~G---~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~WspDg-~l~y~~~~~~~~~~~l 153 (648)
..+.|+|+|++|++..+. .+ -....|+.++..+.......+ .+....++|+|+| .|+.... ..+.++
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g---~~~~~v 85 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYG---SMPAKV 85 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEc---cCCccc
Confidence 367899999999999772 21 114678888777655433322 2335669999999 8776643 223357
Q ss_pred EEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEE
Q 006375 154 WLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHF 233 (648)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l 233 (648)
.++++... .++.-.. ...-.+.|||+|++|++........+|.++|..+.+ ..............|||||++|
T Consensus 86 ~lyd~~~~-----~i~~~~~-~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~-~i~~~~~~~~t~~~WsPdGr~~ 158 (194)
T PF08662_consen 86 TLYDVKGK-----KIFSFGT-QPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKK-KISTFEHSDATDVEWSPDGRYL 158 (194)
T ss_pred EEEcCccc-----EeEeecC-CCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCE-EeeccccCcEEEEEEcCCCCEE
Confidence 77777522 2222222 222357899999999986644444678999998654 2111122222446799999998
Q ss_pred EEEec
Q 006375 234 FITRR 238 (648)
Q Consensus 234 ~~~~~ 238 (648)
+..+.
T Consensus 159 ~ta~t 163 (194)
T PF08662_consen 159 ATATT 163 (194)
T ss_pred EEEEe
Confidence 87665
No 135
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.87 E-value=3.1e-07 Score=91.48 Aligned_cols=243 Identities=11% Similarity=0.181 Sum_probs=161.3
Q ss_pred EeeEEeCCC--CCEEEEEEeCCCCeEEEEEEEECCCCCeeecc-ccCccceeEEecCC-eEEEEEe--CCCCCCceEEEE
Q 006375 83 VGCFQVSPD--NKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITM--DEILRPDKAWLH 156 (648)
Q Consensus 83 ~~~~~~SPD--G~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~WspDg-~l~y~~~--~~~~~~~~l~~~ 156 (648)
+.+.-..|| |.+|.|++. -+||..++.+|+.+..+ --++..++.++||| +++|++. .......+||.+
T Consensus 39 M~n~~l~PDI~GD~IiFt~~------DdlWe~slk~g~~~ritS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v 112 (668)
T COG4946 39 MKNYYLNPDIYGDRIIFTCC------DDLWEYSLKDGKPLRITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVV 112 (668)
T ss_pred hhhhhcCCcccCcEEEEEec------hHHHHhhhccCCeeEEecccceeccccCCCCCcEEEEEEEEecCCCccccEEEE
Confidence 566778898 999999975 36899999999876543 34666779999999 9999764 234456789999
Q ss_pred ECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEcccc---ccEEEEEECCCCCceeEeeecccceeeeEeecCCEE
Q 006375 157 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI---TRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHF 233 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~---~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l 233 (648)
+...++.+..+-|. ..+.--..|+|||+-|+.+.-... -.++|.+..++.+ ..+|.-+. ....+-.|| .+
T Consensus 113 ~~e~Ge~kRiTyfG---r~fT~VaG~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~-~e~LnlGp--athiv~~dg-~i 185 (668)
T COG4946 113 PSEDGEAKRITYFG---RRFTRVAGWIPDGEIIVSTDFHTPFSQWTELYKVNVDGIK-TEPLNLGP--ATHIVIKDG-II 185 (668)
T ss_pred eCCCCcEEEEEEec---cccceeeccCCCCCEEEEeccCCCcccceeeeEEccCCce-eeeccCCc--eeeEEEeCC-EE
Confidence 99998665555552 334434579999998876543222 3689999998876 44443221 122244566 45
Q ss_pred EEEecc---------CCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcc
Q 006375 234 FITRRS---------DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPL 304 (648)
Q Consensus 234 ~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~ 304 (648)
++-.|. .+..+++|+.-...+ .....++.-.. .+......++++++....+|...|+-.+++ |..+
T Consensus 186 vigRntydLP~WK~YkGGtrGklWis~d~g-~tFeK~vdl~~--~vS~PmIV~~RvYFlsD~eG~GnlYSvdld--GkDl 260 (668)
T COG4946 186 VIGRNTYDLPHWKGYKGGTRGKLWISSDGG-KTFEKFVDLDG--NVSSPMIVGERVYFLSDHEGVGNLYSVDLD--GKDL 260 (668)
T ss_pred EEccCcccCcccccccCCccceEEEEecCC-cceeeeeecCC--CcCCceEEcceEEEEecccCccceEEeccC--Cchh
Confidence 665553 144567777654332 23333554333 356777889999999999999999988888 5543
Q ss_pred cccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCcE
Q 006375 305 KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 357 (648)
Q Consensus 305 ~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 357 (648)
+ +-..|.+ .-.-+.+-|+.++.|+-. +.+|.||+.+.+.
T Consensus 261 r-----rHTnFtd----YY~R~~nsDGkrIvFq~~-----GdIylydP~td~l 299 (668)
T COG4946 261 R-----RHTNFTD----YYPRNANSDGKRIVFQNA-----GDIYLYDPETDSL 299 (668)
T ss_pred h-----hcCCchh----ccccccCCCCcEEEEecC-----CcEEEeCCCcCcc
Confidence 2 1222321 112344567888877654 5699999998873
No 136
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.85 E-value=2.3e-08 Score=103.22 Aligned_cols=114 Identities=18% Similarity=0.239 Sum_probs=65.2
Q ss_pred CCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCC------Chhhhhcc-------c----ccCC---
Q 006375 403 DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL------GRQWYENG-------K----FLKK--- 462 (648)
Q Consensus 403 ~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~------g~~~~~~~-------~----~~~~--- 462 (648)
.++.|+||+-||-.+... .++..+..||++||+|++++.|.+... ...-.... . ....
T Consensus 97 ~~~~PvvIFSHGlgg~R~--~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T PF03403_consen 97 PGKFPVVIFSHGLGGSRT--SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDP 174 (379)
T ss_dssp SS-EEEEEEE--TT--TT--TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----G
T ss_pred CCCCCEEEEeCCCCcchh--hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccc
Confidence 377999999999665543 378888999999999999999954321 11100000 0 0000
Q ss_pred C-----------CcHhHHHHHHHHHHH--c------------------CCCCCCeEEEEeeChhHHHHHHHHhhCCCcee
Q 006375 463 K-----------NTFTDFIACAEYLIK--N------------------CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFK 511 (648)
Q Consensus 463 ~-----------~~~~D~~~~~~~l~~--~------------------~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~ 511 (648)
. .=..|+..+++.|.+ . +.+|.++|+++|||+||..++.++.+. ..|+
T Consensus 175 ~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~ 253 (379)
T PF03403_consen 175 EEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFK 253 (379)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcc
Confidence 0 012456666666643 1 346789999999999999999888876 5799
Q ss_pred EEEecCCc
Q 006375 512 AAVAAVPF 519 (648)
Q Consensus 512 a~v~~~~~ 519 (648)
|+|+.-|.
T Consensus 254 ~~I~LD~W 261 (379)
T PF03403_consen 254 AGILLDPW 261 (379)
T ss_dssp EEEEES--
T ss_pred eEEEeCCc
Confidence 99987665
No 137
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.81 E-value=6.9e-06 Score=82.96 Aligned_cols=239 Identities=14% Similarity=0.070 Sum_probs=130.8
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 161 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~ 161 (648)
..+.|||||+.++.+.... ..|+++|+++++.+.. ........+.|+||| .++.+.. ....|+.+++.+.
T Consensus 34 ~~l~~~~dg~~l~~~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~----~~~~l~~~d~~~~ 105 (300)
T TIGR03866 34 RGITLSKDGKLLYVCASDS----DTIQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANE----DDNLVTVIDIETR 105 (300)
T ss_pred CceEECCCCCEEEEEECCC----CeEEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcC----CCCeEEEEECCCC
Confidence 4678999999876554332 3799999999886542 111112458899999 5544432 1235888898764
Q ss_pred CCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeE-eeecccceeeeEeecCCEEEEEeccC
Q 006375 162 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-LTPRVVGVDTAASHRGNHFFITRRSD 240 (648)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~-l~~~~~~~~~~~s~dg~~l~~~~~~~ 240 (648)
+....+... .....+.++|||+++++.... ...++.+|..+++ ... +..........|+++|+.|++.+..+
T Consensus 106 --~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~--~~~~~~~d~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 178 (300)
T TIGR03866 106 --KVLAEIPVG--VEPEGMAVSPDGKIVVNTSET--TNMAHFIDTKTYE-IVDNVLVDQRPRFAEFTADGKELWVSSEIG 178 (300)
T ss_pred --eEEeEeeCC--CCcceEEECCCCCEEEEEecC--CCeEEEEeCCCCe-EEEEEEcCCCccEEEECCCCCEEEEEcCCC
Confidence 222222211 122357899999998875442 3456667887765 222 21111222346899999887765432
Q ss_pred CCCCcEEEEEeCCCCCcceeEecCC-----CCcccceEEE--eCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCcee
Q 006375 241 ELFNSELLACPVDNTSETTVLIPHR-----ESVKLQDIQL--FIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSV 313 (648)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i 313 (648)
..+..+|+++......+.... ......++.+ +++.+++... ...++.++++.. ..+. ..+
T Consensus 179 ----~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~--~~~~i~v~d~~~--~~~~-----~~~ 245 (300)
T TIGR03866 179 ----GTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALG--PANRVAVVDAKT--YEVL-----DYL 245 (300)
T ss_pred ----CEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcC--CCCeEEEEECCC--CcEE-----EEE
Confidence 367888887632222111111 1111223434 4445444332 234688888763 2211 111
Q ss_pred ecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 314 EFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 314 ~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
.... .+..+.+++++..++.. + ..-+.+..+|+.+++
T Consensus 246 ~~~~---~~~~~~~~~~g~~l~~~-~--~~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 246 LVGQ---RVWQLAFTPDEKYLLTT-N--GVSNDVSVIDVAALK 282 (300)
T ss_pred EeCC---CcceEEECCCCCEEEEE-c--CCCCeEEEEECCCCc
Confidence 1111 12234456677755432 1 223579999999887
No 138
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.81 E-value=1.2e-07 Score=96.94 Aligned_cols=142 Identities=20% Similarity=0.253 Sum_probs=104.3
Q ss_pred CCCcceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCC----chhHHHHHHCCCEEEEEccCCC
Q 006375 371 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF----NSSRLSLLDRGFIFAIAQIRGG 446 (648)
Q Consensus 371 ~~~~~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~----~~~~~~l~~~G~~v~~~~~rG~ 446 (648)
...|.+|...+++.||-.+... -.|... +++|+|++.||-..++..+-- ...+-.|+++||.|..-|.||
T Consensus 43 ~~gy~~E~h~V~T~DgYiL~lh-RIp~~~----~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RG- 116 (403)
T KOG2624|consen 43 KYGYPVEEHEVTTEDGYILTLH-RIPRGK----KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRG- 116 (403)
T ss_pred HcCCceEEEEEEccCCeEEEEe-eecCCC----CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcC-
Confidence 3467899999999999844333 334332 789999999996655544322 223457889999999999999
Q ss_pred CCCChhhhhcccc--------cCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCC---ceeEEEe
Q 006375 447 GELGRQWYENGKF--------LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVA 515 (648)
Q Consensus 447 g~~g~~~~~~~~~--------~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~~~a~v~ 515 (648)
..|+++--..... .+.+-...|+.|.++|+.+. +..+++..+|||.|+.....++..+|+ +++.+++
T Consensus 117 n~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~--T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~a 194 (403)
T KOG2624|consen 117 NTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEK--TGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIA 194 (403)
T ss_pred cccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHh--ccccceEEEEEEccchhheehhcccchhhhhhheeee
Confidence 6666553322221 11223668999999999875 467999999999999999888888876 6788888
Q ss_pred cCCcc
Q 006375 516 AVPFV 520 (648)
Q Consensus 516 ~~~~~ 520 (648)
.+|++
T Consensus 195 LAP~~ 199 (403)
T KOG2624|consen 195 LAPAA 199 (403)
T ss_pred ecchh
Confidence 88876
No 139
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.80 E-value=3.1e-09 Score=102.98 Aligned_cols=78 Identities=26% Similarity=0.247 Sum_probs=63.5
Q ss_pred CEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEe
Q 006375 436 FIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 515 (648)
Q Consensus 436 ~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~ 515 (648)
|.|+++|.||.|.....| .........+|+.+.++.+++.-.+ +++.++|+||||.+++.++.++|++++++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHW----DPDFPDYTTDDLAADLEALREALGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCC----GSGSCTHCHHHHHHHHHHHHHHHTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCc----cCCcccccHHHHHHHHHHHHHHhCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 679999999988654321 1234446779999999999886434 4599999999999999999999999999999
Q ss_pred cCCc
Q 006375 516 AVPF 519 (648)
Q Consensus 516 ~~~~ 519 (648)
.+++
T Consensus 75 ~~~~ 78 (230)
T PF00561_consen 75 ISPP 78 (230)
T ss_dssp ESES
T ss_pred Eeee
Confidence 9885
No 140
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.78 E-value=3.6e-07 Score=86.82 Aligned_cols=205 Identities=19% Similarity=0.110 Sum_probs=122.8
Q ss_pred eEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhh
Q 006375 376 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 455 (648)
Q Consensus 376 ~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~ 455 (648)
...+.+.+.+|..+..--.|-... ..+.+..+||-+||.||+.. .|......|.+.|..++.+|++|.|-......
T Consensus 6 ~~~~k~~~~~~~~~~~~a~y~D~~-~~gs~~gTVv~~hGsPGSH~--DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~- 81 (297)
T PF06342_consen 6 RKLVKFQAENGKIVTVQAVYEDSL-PSGSPLGTVVAFHGSPGSHN--DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD- 81 (297)
T ss_pred EEEEEcccccCceEEEEEEEEecC-CCCCCceeEEEecCCCCCcc--chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-
Confidence 344556666776666555554443 22334569999999999755 47777889999999999999999774322111
Q ss_pred cccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcc-ccc-----------
Q 006375 456 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV-DVL----------- 523 (648)
Q Consensus 456 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~-d~~----------- 523 (648)
. ...-.+-..-++.|.++-.++ +++.++|||.||-.|+.++..+| ..++++.+|+- -+-
T Consensus 82 -----~-~~~n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~ 152 (297)
T PF06342_consen 82 -----Q-QYTNEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMET 152 (297)
T ss_pred -----c-ccChHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHH
Confidence 1 112234444455555543344 89999999999999999999886 35666666531 000
Q ss_pred -ccccCCCCCCCccc------ccccCCC--CCHHHHHHHHc---CCc------cccCCCCCCCeEEEeecCCCCccCCch
Q 006375 524 -TTMLDPTIPLTTAE------WEEWGDP--WKEEFYFYMKS---YSP------VDNVKAQNYPHILVTAGLNDPRVMYSE 585 (648)
Q Consensus 524 -~~~~~~~~~~~~~~------~~~~g~~--~~~~~~~~~~~---~sp------~~~~~~~~~P~~li~~g~~D~~v~~~~ 585 (648)
.+..+ .+|..... |...|-- ...++...++. .+- ++.+.+.+.| +|+..|.+|..|..+.
T Consensus 153 i~~l~~-~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ik-vli~ygg~DhLIEeeI 230 (297)
T PF06342_consen 153 INYLYD-LLPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIK-VLIAYGGKDHLIEEEI 230 (297)
T ss_pred HHHHHH-HhhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCc-EEEEEcCcchhhHHHH
Confidence 00000 01111110 1122322 22333333432 221 2334455677 9999999999998887
Q ss_pred HHHHHHHHHh
Q 006375 586 PAKFVAKLRE 595 (648)
Q Consensus 586 ~~~~~~~l~~ 595 (648)
+.++....+.
T Consensus 231 ~~E~a~~f~~ 240 (297)
T PF06342_consen 231 SFEFAMKFKG 240 (297)
T ss_pred HHHHHHHhCC
Confidence 7777766653
No 141
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.74 E-value=5.8e-07 Score=90.39 Aligned_cols=204 Identities=20% Similarity=0.275 Sum_probs=114.7
Q ss_pred EEEEE-eeCccccCCCCcEEEEecCCC-CCCCCCCCc---hhHHHHHHCCCEEEEEccCCCC--CCChhhhhcccccCCC
Q 006375 391 ICIVY-RKNLVKLDGSDPLLLYGYGSY-EICNDPAFN---SSRLSLLDRGFIFAIAQIRGGG--ELGRQWYENGKFLKKK 463 (648)
Q Consensus 391 ~~l~~-~~~~~~~~~~~P~vl~~hGg~-~~~~~~~~~---~~~~~l~~~G~~v~~~~~rG~g--~~g~~~~~~~~~~~~~ 463 (648)
.|++. |.+. + .+.-|+|+|+|||. .....+..- .....+++ ..++++.||.... +.|..+ .
T Consensus 108 ~Wlvk~P~~~-~-pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~y---------P 175 (374)
T PF10340_consen 108 YWLVKAPNRF-K-PKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKY---------P 175 (374)
T ss_pred EEEEeCCccc-C-CCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcC---------c
Confidence 46555 4443 2 23459999999963 222222111 11123333 6799999997543 222222 3
Q ss_pred CcHhHHHHHHHHHH-HcCCCCCCeEEEEeeChhHHHHHHHHhhC-----CCceeEEEecCCcccccccccCCCCCCC---
Q 006375 464 NTFTDFIACAEYLI-KNCYCTKEKLCIEGRSAGGLLIGAVLNMR-----PDLFKAAVAAVPFVDVLTTMLDPTIPLT--- 534 (648)
Q Consensus 464 ~~~~D~~~~~~~l~-~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-----p~~~~a~v~~~~~~d~~~~~~~~~~~~~--- 534 (648)
..+.++++..++|+ +.|. ++|.++|.||||.|++.++..- ....+.+|+.+|.+++......+.....
T Consensus 176 tQL~qlv~~Y~~Lv~~~G~---~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~ 252 (374)
T PF10340_consen 176 TQLRQLVATYDYLVESEGN---KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDNE 252 (374)
T ss_pred hHHHHHHHHHHHHHhccCC---CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCccccccc
Confidence 45689999999999 5554 7899999999999998776531 1246899999999998732111110000
Q ss_pred ------c---ccc-ccc-CCCCCHHHHHHHHcCCccccCCC-----------CCCCeEEEeecCCCCccCCchHHHHHHH
Q 006375 535 ------T---AEW-EEW-GDPWKEEFYFYMKSYSPVDNVKA-----------QNYPHILVTAGLNDPRVMYSEPAKFVAK 592 (648)
Q Consensus 535 ------~---~~~-~~~-g~~~~~~~~~~~~~~sp~~~~~~-----------~~~P~~li~~g~~D~~v~~~~~~~~~~~ 592 (648)
. ..| ..| |+ .+++.. ....|+-++.. .++ .++|+.|+++-. -.+.++|+++
T Consensus 253 ~~D~l~~~~~~~~~~~y~~~-~~~~~~---~~~~~~~n~~~n~d~~~W~~I~~~~-~vfVi~Ge~Evf--rddI~~~~~~ 325 (374)
T PF10340_consen 253 KRDMLSYKGLSMFGDAYIGN-NDPEND---LNSLPFVNIEYNFDAEDWKDILKKY-SVFVIYGEDEVF--RDDILEWAKK 325 (374)
T ss_pred cccccchhhHHHHHHhhccc-cccccc---cccCCccCcccCCChhHHHHhccCC-cEEEEECCcccc--HHHHHHHHHH
Confidence 0 001 011 11 011000 11112211111 134 499999999854 6689999999
Q ss_pred HHhcCCC--CCeEEEEecCCCCccCC
Q 006375 593 LREMKTD--DNILLFKCELGAGHFSK 616 (648)
Q Consensus 593 l~~~~~~--~~~~~~~~~~~~gH~~~ 616 (648)
+...+.. .+..-+-.+.++.|..+
T Consensus 326 ~~~~~~~~~~~~~nv~~~~~G~Hi~P 351 (374)
T PF10340_consen 326 LNDVKPNKFSNSNNVYIDEGGIHIGP 351 (374)
T ss_pred HhhcCccccCCcceEEEecCCccccc
Confidence 9866533 11112223458889653
No 142
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.73 E-value=2.2e-07 Score=109.38 Aligned_cols=105 Identities=13% Similarity=0.063 Sum_probs=64.8
Q ss_pred CcEEEEecCCCCCCCCCCCch---hHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhH----HHHHHHHHHH
Q 006375 406 DPLLLYGYGSYEICNDPAFNS---SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTD----FIACAEYLIK 478 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~---~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D----~~~~~~~l~~ 478 (648)
.|.||++||.......+.... ....|+++||.|+++|+. ..++.- .. ....+.| +.++++.+..
T Consensus 67 ~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G---~~~~~~---~~---~~~~l~~~i~~l~~~l~~v~~ 137 (994)
T PRK07868 67 GPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFG---SPDKVE---GG---MERNLADHVVALSEAIDTVKD 137 (994)
T ss_pred CCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCC---CCChhH---cC---ccCCHHHHHHHHHHHHHHHHH
Confidence 478999999655444333222 256788899999999963 211110 00 0122333 3444444433
Q ss_pred cCCCCCCeEEEEeeChhHHHHHHHHhhC-CCceeEEEecCCcccc
Q 006375 479 NCYCTKEKLCIEGRSAGGLLIGAVLNMR-PDLFKAAVAAVPFVDV 522 (648)
Q Consensus 479 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~~~~a~v~~~~~~d~ 522 (648)
.. .+++.++|+||||.++..+++.+ +++++.+|+.+..+|+
T Consensus 138 ~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 138 VT---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDT 179 (994)
T ss_pred hh---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccccc
Confidence 32 25799999999999998777644 5588988876655553
No 143
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.72 E-value=3.7e-08 Score=108.83 Aligned_cols=126 Identities=14% Similarity=0.128 Sum_probs=80.3
Q ss_pred EeEEEEEeeCccccCCCCcEEEEecCCCCCCCCC--CCchhHHHHHHCCCEEEEEccCCCC-CCChhhhhccccc--CCC
Q 006375 389 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP--AFNSSRLSLLDRGFIFAIAQIRGGG-ELGRQWYENGKFL--KKK 463 (648)
Q Consensus 389 i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~--~~~~~~~~l~~~G~~v~~~~~rG~g-~~g~~~~~~~~~~--~~~ 463 (648)
+.+.++.|+.. ....++|++|++|||....... ........++.++.+|+.+|||-+- |+ -..+... .+=
T Consensus 109 L~LnI~~P~~~-~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gf----l~~~~~~~~~gN 183 (535)
T PF00135_consen 109 LYLNIYTPSNA-SSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGF----LSLGDLDAPSGN 183 (535)
T ss_dssp -EEEEEEETSS-SSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-----BSSSTTSHBST
T ss_pred HHHhhhhcccc-ccccccceEEEeecccccCCCcccccccccccccCCCEEEEEeccccccccc----ccccccccCchh
Confidence 66677778775 4444799999999974433332 1222234567789999999999532 21 1000001 112
Q ss_pred CcHhHHHHHHHHHHHc---CCCCCCeEEEEeeChhHHHHHHHHhhC--CCceeEEEecCCc
Q 006375 464 NTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPF 519 (648)
Q Consensus 464 ~~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~--p~~~~a~v~~~~~ 519 (648)
..+.|.+.|++|++++ -.-||++|.|+|+|+||..+..++... ..+|+.+|+.+|.
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 3689999999999876 346999999999999999888777652 2489999999984
No 144
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.68 E-value=8.5e-08 Score=95.16 Aligned_cols=112 Identities=13% Similarity=0.116 Sum_probs=77.7
Q ss_pred CCCcEEEEecCCCCCCCCCCCch-hHHHHHH-CCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCC
Q 006375 404 GSDPLLLYGYGSYEICNDPAFNS-SRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 481 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~-~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 481 (648)
...|++|++||..+.. ...|.. ....|+. .++.|+++|+++.+... +..+.. .-...-+++...+++|.+...
T Consensus 34 ~~~p~vilIHG~~~~~-~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~~--~~~~v~~~la~~l~~L~~~~g 108 (275)
T cd00707 34 PSRPTRFIIHGWTSSG-EESWISDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAVN--NTRVVGAELAKFLDFLVDNTG 108 (275)
T ss_pred CCCCcEEEEcCCCCCC-CCcHHHHHHHHHHhcCCCEEEEEECccccccC--hHHHHH--hHHHHHHHHHHHHHHHHHhcC
Confidence 4568999999954443 222332 2334554 58999999999864322 111100 001123577788888887755
Q ss_pred CCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 006375 482 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 520 (648)
Q Consensus 482 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~ 520 (648)
.+.++|.++|+|+||.+++.++.+.|++++.+++..|..
T Consensus 109 ~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 109 LSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred CChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 678899999999999999999999999999999887754
No 145
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.66 E-value=4.6e-06 Score=81.92 Aligned_cols=242 Identities=14% Similarity=0.112 Sum_probs=133.6
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC---ccceeEEecCC-eEEEEEeCCCCCCceEEEEEC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l 158 (648)
+--.++||+|||||-++... ..-||.+..++.-.+..+..+ ....+.||||+ +++-...++ .++++++
T Consensus 227 VWfl~FS~nGkyLAsaSkD~---Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e-----~~~lwDv 298 (519)
T KOG0293|consen 227 VWFLQFSHNGKYLASASKDS---TAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE-----VLSLWDV 298 (519)
T ss_pred EEEEEEcCCCeeEeeccCCc---eEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchH-----heeeccC
Confidence 45678999999999776533 235566655554222223332 23458999999 765544332 2888898
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC--ceeEeeecccceeeeEeecCCEEEEE
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGVDTAASHRGNHFFIT 236 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~--~~~~l~~~~~~~~~~~s~dg~~l~~~ 236 (648)
.++ +-...|.....--..+..|-|||..++..+.+ ..++.+|+++.. .++-+.. ..-.+..+++||++++.+
T Consensus 299 ~tg--d~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d---r~i~~wdlDgn~~~~W~gvr~-~~v~dlait~Dgk~vl~v 372 (519)
T KOG0293|consen 299 DTG--DLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD---RTIIMWDLDGNILGNWEGVRD-PKVHDLAITYDGKYVLLV 372 (519)
T ss_pred Ccc--hhhhhcccCcCCCcceeEEccCCceeEecCCC---CcEEEecCCcchhhccccccc-ceeEEEEEcCCCcEEEEE
Confidence 887 34455544312223367899999997754433 678999998865 1221110 112345688999999888
Q ss_pred eccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecC
Q 006375 237 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFI 316 (648)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~ 316 (648)
..+ .++..++.... ..+-++.+.. .+.++...++.-++..+-. ...+.+|++.. ...++.... +.
T Consensus 373 ~~d-----~~i~l~~~e~~-~dr~lise~~--~its~~iS~d~k~~LvnL~-~qei~LWDl~e-~~lv~kY~G-hk---- 437 (519)
T KOG0293|consen 373 TVD-----KKIRLYNREAR-VDRGLISEEQ--PITSFSISKDGKLALVNLQ-DQEIHLWDLEE-NKLVRKYFG-HK---- 437 (519)
T ss_pred ecc-----cceeeechhhh-hhhccccccC--ceeEEEEcCCCcEEEEEcc-cCeeEEeecch-hhHHHHhhc-cc----
Confidence 754 35666666541 1221444332 3677888876443333321 23577778762 111111100 00
Q ss_pred CCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCcE
Q 006375 317 DPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 357 (648)
Q Consensus 317 ~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 357 (648)
...+.|.+- +....+.++. |-..-+.+|.++..+|+.
T Consensus 438 q~~fiIrSC-Fgg~~~~fia---SGSED~kvyIWhr~sgkl 474 (519)
T KOG0293|consen 438 QGHFIIRSC-FGGGNDKFIA---SGSEDSKVYIWHRISGKL 474 (519)
T ss_pred ccceEEEec-cCCCCcceEE---ecCCCceEEEEEccCCce
Confidence 112233210 1111222322 334557899999999983
No 146
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.66 E-value=2.4e-05 Score=78.33 Aligned_cols=249 Identities=12% Similarity=0.080 Sum_probs=143.6
Q ss_pred CCCCeEeCCEEEEEEecCCceEEEEEEEecCCCC--CCCCccccCCCCCCCCCceEE---------EecccccCCCCcEE
Q 006375 14 VSAPFRQGSYYYYTRTLEGKEYVQHCRRLIHNNE--APPSVHDTMETGPDAPPEHLI---------LDENVKAEGRGFYS 82 (648)
Q Consensus 14 ~s~p~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~l---------ld~n~~~~~~~~~~ 82 (648)
.|.|...|++.||.-.-.|-. .+|.....+.. ++-.+.++.......++.+++ +||.+..-. ...
T Consensus 228 vS~PmIV~~RvYFlsD~eG~G--nlYSvdldGkDlrrHTnFtdYY~R~~nsDGkrIvFq~~GdIylydP~td~le--kld 303 (668)
T COG4946 228 VSSPMIVGERVYFLSDHEGVG--NLYSVDLDGKDLRRHTNFTDYYPRNANSDGKRIVFQNAGDIYLYDPETDSLE--KLD 303 (668)
T ss_pred cCCceEEcceEEEEecccCcc--ceEEeccCCchhhhcCCchhccccccCCCCcEEEEecCCcEEEeCCCcCcce--eee
Confidence 788999999999887765533 24444332211 122233333332223333433 455443211 111
Q ss_pred EeeE--------E----------eCC-CCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEecCC-eEEEE
Q 006375 83 VGCF--------Q----------VSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYI 142 (648)
Q Consensus 83 ~~~~--------~----------~SP-DG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg-~l~y~ 142 (648)
++-+ . +|+ +|.++|+.+. | +.+|++...|-..+..-++-..-...+-|+ .++..
T Consensus 304 I~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR--G----kaFi~~~~~~~~iqv~~~~~VrY~r~~~~~e~~vig 377 (668)
T COG4946 304 IGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR--G----KAFIMRPWDGYSIQVGKKGGVRYRRIQVDPEGDVIG 377 (668)
T ss_pred cCCccccccccccccCHHHhhhhhccCCCcEEEEEec--C----cEEEECCCCCeeEEcCCCCceEEEEEccCCcceEEe
Confidence 1100 0 222 6778887764 3 678888877766554322222124445555 55443
Q ss_pred EeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc-
Q 006375 143 TMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG- 221 (648)
Q Consensus 143 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~- 221 (648)
..+ ...|-.++.+++ +.+ .+++ +-.-...+..|+||+++++. + ...+||++|++++. .+.+-..+.+
T Consensus 378 t~d----gD~l~iyd~~~~--e~k-r~e~-~lg~I~av~vs~dGK~~vva-N--dr~el~vididngn-v~~idkS~~~l 445 (668)
T COG4946 378 TND----GDKLGIYDKDGG--EVK-RIEK-DLGNIEAVKVSPDGKKVVVA-N--DRFELWVIDIDNGN-VRLIDKSEYGL 445 (668)
T ss_pred ccC----CceEEEEecCCc--eEE-EeeC-CccceEEEEEcCCCcEEEEE-c--CceEEEEEEecCCC-eeEecccccce
Confidence 322 234667777776 222 2322 22334467889999999864 3 34789999999998 7777666555
Q ss_pred -eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEec
Q 006375 222 -VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYERE 286 (648)
Q Consensus 222 -~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 286 (648)
.++.|+|+++||++.-.. +.-...|-.+|..+..... ++++.......+|.++++++++.+.+
T Consensus 446 Itdf~~~~nsr~iAYafP~-gy~tq~Iklydm~~~Kiy~-vTT~ta~DfsPaFD~d~ryLYfLs~R 509 (668)
T COG4946 446 ITDFDWHPNSRWIAYAFPE-GYYTQSIKLYDMDGGKIYD-VTTPTAYDFSPAFDPDGRYLYFLSAR 509 (668)
T ss_pred eEEEEEcCCceeEEEecCc-ceeeeeEEEEecCCCeEEE-ecCCcccccCcccCCCCcEEEEEecc
Confidence 346699999999988764 4555677777877633232 44444444567788888888777665
No 147
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.64 E-value=3.4e-07 Score=83.52 Aligned_cols=224 Identities=18% Similarity=0.111 Sum_probs=125.9
Q ss_pred EEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhccc
Q 006375 379 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK 458 (648)
Q Consensus 379 ~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~ 458 (648)
..++..||..+++. .+|.+. +.+-.+++-|+++...- .+...+...+.+||.|+..||||.|+.-..=...-.
T Consensus 8 ~~l~~~DG~~l~~~-~~pA~~-----~~~g~~~va~a~Gv~~~-fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~ 80 (281)
T COG4757 8 AHLPAPDGYSLPGQ-RFPADG-----KASGRLVVAGATGVGQY-FYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQ 80 (281)
T ss_pred cccccCCCccCccc-cccCCC-----CCCCcEEecccCCcchh-HhHHHHHHhhccCceEEEEecccccCCCccccccCc
Confidence 56778899999988 555543 44545566676665432 244455667778999999999998875322110000
Q ss_pred ccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccccc-----------
Q 006375 459 FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML----------- 527 (648)
Q Consensus 459 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~----------- 527 (648)
-.-......|+.++++++.+.- -...+..+|||+||.+.+.+.+ +|..-.++|..++.. +...|.
T Consensus 81 ~~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~~~-~~k~~a~~vfG~gag-wsg~m~~~~~l~~~~l~ 156 (281)
T COG4757 81 WRYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLLGQ-HPKYAAFAVFGSGAG-WSGWMGLRERLGAVLLW 156 (281)
T ss_pred cchhhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeeccccc-CcccceeeEeccccc-cccchhhhhcccceeec
Confidence 0112245689999999998742 2357999999999987665555 563222333332211 111110
Q ss_pred CCCCC---CCccc--ccccCCCCC-H-HHHHHHHcCC---------cc-----ccCCCCCCCeEEEeecCCCCccCCchH
Q 006375 528 DPTIP---LTTAE--WEEWGDPWK-E-EFYFYMKSYS---------PV-----DNVKAQNYPHILVTAGLNDPRVMYSEP 586 (648)
Q Consensus 528 ~~~~~---~~~~~--~~~~g~~~~-~-~~~~~~~~~s---------p~-----~~~~~~~~P~~li~~g~~D~~v~~~~~ 586 (648)
.--.| ..... +...|..++ + ..++.++.++ |. +-.++..+| +..+...+|+-+|+...
T Consensus 157 ~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtP-i~~~~~~DD~w~P~As~ 235 (281)
T COG4757 157 NLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTP-ITFSRALDDPWAPPASR 235 (281)
T ss_pred cccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCc-eeeeccCCCCcCCHHHH
Confidence 00000 00011 112232211 1 1122222211 11 112344788 99999999999999988
Q ss_pred HHHHHHHHhcCCCCCeEEEEecCC-CCccCC
Q 006375 587 AKFVAKLREMKTDDNILLFKCELG-AGHFSK 616 (648)
Q Consensus 587 ~~~~~~l~~~~~~~~~~~~~~~~~-~gH~~~ 616 (648)
.+|..-.+++. -++..++..++ .||+..
T Consensus 236 d~f~~~y~nAp--l~~~~~~~~~~~lGH~gy 264 (281)
T COG4757 236 DAFASFYRNAP--LEMRDLPRAEGPLGHMGY 264 (281)
T ss_pred HHHHHhhhcCc--ccceecCcccCcccchhh
Confidence 88888877654 34455553322 589653
No 148
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.62 E-value=4e-06 Score=71.87 Aligned_cols=162 Identities=20% Similarity=0.268 Sum_probs=95.7
Q ss_pred cEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCC--CCChhhhhcccccCCCCc-HhHHHHHHHHHHHcCCCC
Q 006375 407 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGG--ELGRQWYENGKFLKKKNT-FTDFIACAEYLIKNCYCT 483 (648)
Q Consensus 407 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g--~~g~~~~~~~~~~~~~~~-~~D~~~~~~~l~~~~~~d 483 (648)
-+||+.||...+..++.....+..|+.+|+.|+.+++..-- -+|+. +......+ -...+.++..|.+. .+
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~r-----kPp~~~~t~~~~~~~~~aql~~~--l~ 87 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRR-----KPPPGSGTLNPEYIVAIAQLRAG--LA 87 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCC-----CCcCccccCCHHHHHHHHHHHhc--cc
Confidence 36888999766666666666677899999999999874211 01100 00111122 24455666666654 34
Q ss_pred CCeEEEEeeChhHHHHHHHHhhCCCceeEEEec-CCcccccccccCCCCCCCcccccccCCCCCHHHHHHHHcCCccccC
Q 006375 484 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA-VPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 562 (648)
Q Consensus 484 ~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~-~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~ 562 (648)
..++++-|.||||-++..++..--..+.+.+|. +||. . -|.|+... ..++
T Consensus 88 ~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh--------------p-----pGKPe~~R----------t~HL 138 (213)
T COG3571 88 EGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH--------------P-----PGKPEQLR----------TEHL 138 (213)
T ss_pred CCceeeccccccchHHHHHHHhhcCCcceEEEecCccC--------------C-----CCCcccch----------hhhc
Confidence 578999999999998877765422224454443 2221 0 03333221 1346
Q ss_pred CCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCc
Q 006375 563 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 613 (648)
Q Consensus 563 ~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH 613 (648)
..+++| +||+||+.|+.=.-.+...+ ....+.+++++. ++.|
T Consensus 139 ~gl~tP-tli~qGtrD~fGtr~~Va~y-----~ls~~iev~wl~---~adH 180 (213)
T COG3571 139 TGLKTP-TLITQGTRDEFGTRDEVAGY-----ALSDPIEVVWLE---DADH 180 (213)
T ss_pred cCCCCC-eEEeecccccccCHHHHHhh-----hcCCceEEEEec---cCcc
Confidence 667888 99999999987544333211 123355666665 7788
No 149
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.62 E-value=5.3e-07 Score=82.18 Aligned_cols=110 Identities=23% Similarity=0.372 Sum_probs=69.7
Q ss_pred CCeEEEEeeChhHHHHHHHH-hhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHHHHHHHHcCCccccC
Q 006375 484 KEKLCIEGRSAGGLLIGAVL-NMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 562 (648)
Q Consensus 484 ~~~i~i~G~S~GG~l~~~~~-~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~ 562 (648)
.+.+.++|||.|+.+++.++ .+....++++++.+|+..-.... ..+ .. ..+.+...
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~---~~~----~~---------------~~f~~~p~- 110 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEP---FPP----EL---------------DGFTPLPR- 110 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHC---CTC----GG---------------CCCTTSHC-
T ss_pred CCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccc---hhh----hc---------------cccccCcc-
Confidence 35699999999999999988 76778999999999984210110 110 00 11122211
Q ss_pred CCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHH
Q 006375 563 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLRE 625 (648)
Q Consensus 563 ~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 625 (648)
....+| .+++.+++|+.||+..+.+++++|.. +++.++ ++||+........+.+
T Consensus 111 ~~l~~~-~~viaS~nDp~vp~~~a~~~A~~l~a-----~~~~~~---~~GHf~~~~G~~~~p~ 164 (171)
T PF06821_consen 111 DPLPFP-SIVIASDNDPYVPFERAQRLAQRLGA-----ELIILG---GGGHFNAASGFGPWPE 164 (171)
T ss_dssp CHHHCC-EEEEEETTBSSS-HHHHHHHHHHHT------EEEEET---S-TTSSGGGTHSS-HH
T ss_pred cccCCC-eEEEEcCCCCccCHHHHHHHHHHcCC-----CeEECC---CCCCcccccCCCchHH
Confidence 122455 58899999999999999999999864 345554 8999876554444443
No 150
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.61 E-value=2.3e-07 Score=90.34 Aligned_cols=198 Identities=17% Similarity=0.148 Sum_probs=80.1
Q ss_pred CCcEEEEecCCCCCCC-CCCCchhHHHHHHCCCEEEEEccCC-CCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcC--
Q 006375 405 SDPLLLYGYGSYEICN-DPAFNSSRLSLLDRGFIFAIAQIRG-GGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC-- 480 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~-~~~~~~~~~~l~~~G~~v~~~~~rG-~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-- 480 (648)
+..+||++-|-...-. .+.....+..|...||.|+.+..+- -+|+|..-.+ ++.+|+.+|++||+...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~--------~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLD--------RDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HH--------HHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhh--------hHHHHHHHHHHHHHHhhcc
Confidence 3458888876322222 2333344456655799999999885 3355543222 56799999999999873
Q ss_pred CCCCCeEEEEeeChhHHHHHHHHhhCC-----CceeEEEecCCcccccccccC------------------------CCC
Q 006375 481 YCTKEKLCIEGRSAGGLLIGAVLNMRP-----DLFKAAVAAVPFVDVLTTMLD------------------------PTI 531 (648)
Q Consensus 481 ~~d~~~i~i~G~S~GG~l~~~~~~~~p-----~~~~a~v~~~~~~d~~~~~~~------------------------~~~ 531 (648)
....++|+++|||=|+--++.++.... ..+.++|+++|+.|--..... +.+
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~l 183 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEIL 183 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCcee
Confidence 236789999999999998888877642 469999999999984321110 000
Q ss_pred CCCcccccccCCCCCHHHHHHHHcCCcc----------------ccCCCCCCCeEEEeecCCCCccCCch-HHHHHHHHH
Q 006375 532 PLTTAEWEEWGDPWKEEFYFYMKSYSPV----------------DNVKAQNYPHILVTAGLNDPRVMYSE-PAKFVAKLR 594 (648)
Q Consensus 532 ~~~~~~~~~~g~~~~~~~~~~~~~~sp~----------------~~~~~~~~P~~li~~g~~D~~v~~~~-~~~~~~~l~ 594 (648)
|........|+.|-.+ ++++.-.+|. ....+++.| +|++.+.+|..||.+. -+++.++++
T Consensus 184 p~~~~~~~~~~~PiTA--~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~p-lLvl~Sg~DEyvP~~vdk~~Ll~rw~ 260 (303)
T PF08538_consen 184 PREFTPLVFYDTPITA--YRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKP-LLVLYSGKDEYVPPWVDKEALLERWK 260 (303)
T ss_dssp ----GGTTT-SS---H--HHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S--EEEEEE--TT----------------
T ss_pred eccccccccCCCcccH--HHHHhccCCCCcccccCCCCCHHHHHHHhccCCCc-eEEEecCCCceecccccccccccccc
Confidence 0000000000122111 1122111221 234455667 9999999999999753 456677777
Q ss_pred hcCCC----CCeEEEEecCCCCccCC
Q 006375 595 EMKTD----DNILLFKCELGAGHFSK 616 (648)
Q Consensus 595 ~~~~~----~~~~~~~~~~~~gH~~~ 616 (648)
.+-.+ ..--+++ |+.|...
T Consensus 261 ~a~~~~~~s~~S~iI~---GA~H~~~ 283 (303)
T PF08538_consen 261 AATNPKIWSPLSGIIP---GASHNVS 283 (303)
T ss_dssp --------------------------
T ss_pred cccccccccccccccc---ccccccc
Confidence 65332 1123455 8899654
No 151
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.61 E-value=3.4e-06 Score=92.02 Aligned_cols=159 Identities=11% Similarity=0.028 Sum_probs=101.0
Q ss_pred EEeeEEeCCCCCEEEEEEeC---CCCeEEEEEEEECCCCCeeeccccCccceeEEecCC-eEEEEEeCC-------CCCC
Q 006375 82 SVGCFQVSPDNKLVAYAEDT---KGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDE-------ILRP 150 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~---~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg-~l~y~~~~~-------~~~~ 150 (648)
.+.++.+||||+++||.... .++...+||+.+..+ +..+.+.......+.|+||| +|+|..... ....
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg-~~~~lt~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~ 429 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG-VAVQVLEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPAT 429 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC-cceeeecCCCCCCceECCCCCceEEEecCcceEEEeccCCC
Confidence 56799999999999999742 122367999999743 33433222235679999998 898876421 1123
Q ss_pred ceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEE---EECCCCC----ceeEeeecccc--
Q 006375 151 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY---LDVSKPE----ELRVLTPRVVG-- 221 (648)
Q Consensus 151 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~---~dl~~~~----~~~~l~~~~~~-- 221 (648)
.++|.+.++++... . . .+ .-...+.|||||++|++... .+||+ ...++++ .++.+.....+
T Consensus 430 gql~~~~vd~ge~~--~--~-~~-g~Issl~wSpDG~RiA~i~~----g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~ 499 (591)
T PRK13616 430 GQLARTPVDASAVA--S--R-VP-GPISELQLSRDGVRAAMIIG----GKVYLAVVEQTEDGQYALTNPREVGPGLGDTA 499 (591)
T ss_pred ceEEEEeccCchhh--h--c-cC-CCcCeEEECCCCCEEEEEEC----CEEEEEEEEeCCCCceeecccEEeecccCCcc
Confidence 46777777665321 1 1 11 12346789999999999773 37887 6655554 12234443333
Q ss_pred eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCC
Q 006375 222 VDTAASHRGNHFFITRRSDELFNSELLACPVDNT 255 (648)
Q Consensus 222 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 255 (648)
....|..++. |+..+.. .+..++.+++++.
T Consensus 500 ~~l~W~~~~~-L~V~~~~---~~~~v~~v~vDG~ 529 (591)
T PRK13616 500 VSLDWRTGDS-LVVGRSD---PEHPVWYVNLDGS 529 (591)
T ss_pred ccceEecCCE-EEEEecC---CCCceEEEecCCc
Confidence 3345888776 6655442 3456888888863
No 152
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.60 E-value=8.2e-05 Score=72.68 Aligned_cols=262 Identities=15% Similarity=0.156 Sum_probs=138.8
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCC-eEEEEEEEECCCCCeeec---cccCcc-ceeEEecCCeEEEEEeCCCCCCceEEEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGD-EIYTVYVIDIETGTPVGK---PLVGVT-ASVEWAGNEALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~-e~~~l~v~dl~~g~~~~~---~~~~~~-~~~~WspDg~l~y~~~~~~~~~~~l~~~ 156 (648)
...-+.|+|++|+| |+....|. ....-|-+|-++|+.... .+.+.. ..++.++||+++|+..=.. ..|-..
T Consensus 41 nptyl~~~~~~~~L-Y~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~---g~v~v~ 116 (346)
T COG2706 41 NPTYLAVNPDQRHL-YVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHS---GSVSVY 116 (346)
T ss_pred CCceEEECCCCCEE-EEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccC---ceEEEE
Confidence 34567899999876 44433322 134445556655765421 233321 3488899995555543111 224444
Q ss_pred ECCCCCCCcEE---EE-eec------CCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeE-----eeecccc
Q 006375 157 KLEADQSNDIC---LY-HEK------DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-----LTPRVVG 221 (648)
Q Consensus 157 ~l~~~~~~~~~---~~-~~~------~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~-----l~~~~~~ 221 (648)
.+.....-... +. .+. .....-...++||+++|+.. +-+..+|++++++.+. ++. +.++.+-
T Consensus 117 p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~--DLG~Dri~~y~~~dg~-L~~~~~~~v~~G~GP 193 (346)
T COG2706 117 PLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVP--DLGTDRIFLYDLDDGK-LTPADPAEVKPGAGP 193 (346)
T ss_pred EcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEe--ecCCceEEEEEcccCc-cccccccccCCCCCc
Confidence 44332111111 11 111 00112235689999999864 3355678888888776 222 2222222
Q ss_pred eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCccee-----EecCCC--CcccceEEEeCCEEEEEEecCCeeEEEE
Q 006375 222 VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-----LIPHRE--SVKLQDIQLFIDHLAVYEREGGLQKITT 294 (648)
Q Consensus 222 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~l~v 294 (648)
....|.|+|+..|.+.... ....++.++-.. ++.+. .+|.+. .....++.+..|+.+++..+.+...|.+
T Consensus 194 RHi~FHpn~k~aY~v~EL~--stV~v~~y~~~~-g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~ 270 (346)
T COG2706 194 RHIVFHPNGKYAYLVNELN--STVDVLEYNPAV-GKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAV 270 (346)
T ss_pred ceEEEcCCCcEEEEEeccC--CEEEEEEEcCCC-ceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEE
Confidence 3355889998877776652 223444444332 22221 333332 2234456777777777777778889999
Q ss_pred EEcCCCCCcccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCcEEE
Q 006375 295 YRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVL 359 (648)
Q Consensus 295 ~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~ 359 (648)
+.++..++.+.-+ .... ..+..=..++.++.++-|++.-....+ -.+|+.|.++|++.+
T Consensus 271 f~V~~~~g~L~~~---~~~~--teg~~PR~F~i~~~g~~Liaa~q~sd~-i~vf~~d~~TG~L~~ 329 (346)
T COG2706 271 FSVDPDGGKLELV---GITP--TEGQFPRDFNINPSGRFLIAANQKSDN-ITVFERDKETGRLTL 329 (346)
T ss_pred EEEcCCCCEEEEE---EEec--cCCcCCccceeCCCCCEEEEEccCCCc-EEEEEEcCCCceEEe
Confidence 9998766643211 0000 000001135556666655544444333 679999999998443
No 153
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.57 E-value=9.3e-07 Score=84.19 Aligned_cols=115 Identities=18% Similarity=0.224 Sum_probs=73.8
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCC--------------CChhhhhcccc--cCC---
Q 006375 402 LDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE--------------LGRQWYENGKF--LKK--- 462 (648)
Q Consensus 402 ~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~--------------~g~~~~~~~~~--~~~--- 462 (648)
+++|+|+||+-||-.++.. -|+.....||++||+|+++..|-..- +-.+|..--.- ..+
T Consensus 114 k~~k~PvvvFSHGLggsRt--~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ 191 (399)
T KOG3847|consen 114 KNDKYPVVVFSHGLGGSRT--LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFH 191 (399)
T ss_pred CCCCccEEEEecccccchh--hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEE
Confidence 3678999999999544432 36777789999999999999986432 11122211000 001
Q ss_pred ---CC---cHhHHHHHHHHHHH---------------------cCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEe
Q 006375 463 ---KN---TFTDFIACAEYLIK---------------------NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 515 (648)
Q Consensus 463 ---~~---~~~D~~~~~~~l~~---------------------~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~ 515 (648)
+. -.+++..|++-|.+ ++.+|..+++|+|||.||..+++....+. .|+|+|+
T Consensus 192 irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~ 270 (399)
T KOG3847|consen 192 IRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIA 270 (399)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeee
Confidence 01 12334444443332 23477899999999999998888877654 5999998
Q ss_pred cCCc
Q 006375 516 AVPF 519 (648)
Q Consensus 516 ~~~~ 519 (648)
.-++
T Consensus 271 lD~W 274 (399)
T KOG3847|consen 271 LDAW 274 (399)
T ss_pred eeee
Confidence 7543
No 154
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.54 E-value=3.7e-07 Score=85.64 Aligned_cols=116 Identities=19% Similarity=0.165 Sum_probs=79.2
Q ss_pred eEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHC-CCEEEEEccCCCCCCChhhh
Q 006375 376 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWY 454 (648)
Q Consensus 376 ~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~rG~g~~g~~~~ 454 (648)
.+.+.++..++ ++-.++..|.. ..-|++++.|||..+. .+|...+..+..+ -..++++|.||+|+.--+-.
T Consensus 50 kedv~i~~~~~-t~n~Y~t~~~~-----t~gpil~l~HG~G~S~--LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e 121 (343)
T KOG2564|consen 50 KEDVSIDGSDL-TFNVYLTLPSA-----TEGPILLLLHGGGSSA--LSFAIFASELKSKIRCRCLALDLRGHGETKVENE 121 (343)
T ss_pred ccccccCCCcc-eEEEEEecCCC-----CCccEEEEeecCcccc--hhHHHHHHHHHhhcceeEEEeeccccCccccCCh
Confidence 35566665555 35555444432 3469999999965443 3467767776665 56779999999997532221
Q ss_pred hcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhh
Q 006375 455 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 505 (648)
Q Consensus 455 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 505 (648)
. ....+....|+.+.++++... .+.+|.++||||||.++...+..
T Consensus 122 ~---dlS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 122 D---DLSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred h---hcCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhh
Confidence 1 133445678999999888753 35689999999999999776665
No 155
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.51 E-value=3.8e-06 Score=82.48 Aligned_cols=195 Identities=12% Similarity=0.122 Sum_probs=111.3
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec---cccCccceeEEecCC-eEEEEEeCCCCCCceEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~---~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~ 156 (648)
..+..+.||||.++|.-- |.+. .+++||+.+|..+.. .......+.+|-||| +++- +.+ ...++.+
T Consensus 270 ~~V~yi~wSPDdryLlaC----g~~e-~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~-Gs~----dr~i~~w 339 (519)
T KOG0293|consen 270 QPVSYIMWSPDDRYLLAC----GFDE-VLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVT-GSP----DRTIIMW 339 (519)
T ss_pred CceEEEEECCCCCeEEec----CchH-heeeccCCcchhhhhcccCcCCCcceeEEccCCceeEe-cCC----CCcEEEe
Confidence 467789999999987522 2212 389999999987643 222235669999999 7644 332 2457888
Q ss_pred ECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEE
Q 006375 157 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFIT 236 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~ 236 (648)
++++.. .--.+.....-..+++.++||++++... ...+|.+++.++......+.....-....+|.||+.+ +
T Consensus 340 dlDgn~---~~~W~gvr~~~v~dlait~Dgk~vl~v~---~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~--L 411 (519)
T KOG0293|consen 340 DLDGNI---LGNWEGVRDPKVHDLAITYDGKYVLLVT---VDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLA--L 411 (519)
T ss_pred cCCcch---hhcccccccceeEEEEEcCCCcEEEEEe---cccceeeechhhhhhhccccccCceeEEEEcCCCcEE--E
Confidence 887652 1111111112345788999999998765 3467888888776522234333333456688888743 3
Q ss_pred eccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeC--CEEEEEEecCCeeEEEEEEcC
Q 006375 237 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~l~v~~~~ 298 (648)
.|.. +..+...|++.....+....+.....+-.-.+.+ +..+....++ +++++|+..
T Consensus 412 vnL~---~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED--~kvyIWhr~ 470 (519)
T KOG0293|consen 412 VNLQ---DQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSED--SKVYIWHRI 470 (519)
T ss_pred EEcc---cCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCC--ceEEEEEcc
Confidence 3431 2457777776422111122222222222222222 2445555554 478888876
No 156
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.51 E-value=6.3e-05 Score=75.91 Aligned_cols=193 Identities=15% Similarity=0.150 Sum_probs=107.9
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 161 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~ 161 (648)
..+.++|||+.++.+.... ..|+++|+.+++.+.. ........++|+||| .+++...+ ...++.++..+.
T Consensus 76 ~~~~~~~~g~~l~~~~~~~----~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~----~~~~~~~d~~~~ 147 (300)
T TIGR03866 76 ELFALHPNGKILYIANEDD----NLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSET----TNMAHFIDTKTY 147 (300)
T ss_pred cEEEECCCCCEEEEEcCCC----CeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecC----CCeEEEEeCCCC
Confidence 4578999999886654322 3799999998765432 112223458999999 65554322 123555676554
Q ss_pred CCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-----c---eeeeEeecCCEE
Q 006375 162 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-----G---VDTAASHRGNHF 233 (648)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-----~---~~~~~s~dg~~l 233 (648)
. ......... ....+.+++||++|++.+. ....|+++|+++++....+..... . ....++|+|+.+
T Consensus 148 ~--~~~~~~~~~--~~~~~~~s~dg~~l~~~~~--~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~ 221 (300)
T TIGR03866 148 E--IVDNVLVDQ--RPRFAEFTADGKELWVSSE--IGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTA 221 (300)
T ss_pred e--EEEEEEcCC--CccEEEECCCCCEEEEEcC--CCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEE
Confidence 1 111111111 1124678999999877533 235799999988762222221111 1 124579999987
Q ss_pred EEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEE--eCCEEEEEEecCCeeEEEEEEcCC
Q 006375 234 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQL--FIDHLAVYEREGGLQKITTYRLPA 299 (648)
Q Consensus 234 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~l~v~~~~~ 299 (648)
++.... +.++.++|+++..... .+.... .+..+.+ +++.++..... ...+.++++..
T Consensus 222 ~~~~~~----~~~i~v~d~~~~~~~~-~~~~~~--~~~~~~~~~~g~~l~~~~~~--~~~i~v~d~~~ 280 (300)
T TIGR03866 222 FVALGP----ANRVAVVDAKTYEVLD-YLLVGQ--RVWQLAFTPDEKYLLTTNGV--SNDVSVIDVAA 280 (300)
T ss_pred EEEcCC----CCeEEEEECCCCcEEE-EEEeCC--CcceEEECCCCCEEEEEcCC--CCeEEEEECCC
Confidence 665432 2368888886532222 222222 2334444 44555443322 34688888873
No 157
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.51 E-value=5.1e-07 Score=89.45 Aligned_cols=131 Identities=16% Similarity=0.063 Sum_probs=91.4
Q ss_pred eEEEEEeCCC-CeEEeEEEEEeeCccc--cCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChh
Q 006375 376 TERKWASASD-GTQIPICIVYRKNLVK--LDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 452 (648)
Q Consensus 376 ~~~~~~~s~~-g~~i~~~l~~~~~~~~--~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~ 452 (648)
...+++.... +.+++.++.+|..... ...+.|+|++-||.... ..+|...+..|++.||+|+.++..|+..-+.+
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~--~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~ 115 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSY--VTGFAWLAEHLASYGFVVAAPDHPGSNAGGAP 115 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCC--ccchhhhHHHHhhCceEEEeccCCCcccccCC
Confidence 3444554433 5578888777766410 11478999999994332 45688888999999999999999997654444
Q ss_pred hhhccccc----CCCCcHhHHHHHHHHHHHc-------CCCCCCeEEEEeeChhHHHHHHHHhhCCC
Q 006375 453 WYENGKFL----KKKNTFTDFIACAEYLIKN-------CYCTKEKLCIEGRSAGGLLIGAVLNMRPD 508 (648)
Q Consensus 453 ~~~~~~~~----~~~~~~~D~~~~~~~l~~~-------~~~d~~~i~i~G~S~GG~l~~~~~~~~p~ 508 (648)
=+.++... ....-..|+...+.+|.+. +.+|+.+|++.|+|+||+.++.++.-+.+
T Consensus 116 ~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 116 AAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 44444211 0112346888888888766 35799999999999999999888876554
No 158
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.51 E-value=0.00015 Score=77.19 Aligned_cols=248 Identities=17% Similarity=0.141 Sum_probs=147.1
Q ss_pred EeCCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEEecccccCCCCcEEEeeEEeCCCCCEEEEE
Q 006375 19 RQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYA 98 (648)
Q Consensus 19 ~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~~~~~~~~~SPDG~~la~~ 98 (648)
+.|.++-|+...+|++...++.+...+ + +.+-|.-.. +...++.|++||+.+.|+
T Consensus 133 pdg~~la~~~s~~G~e~~~l~v~Dl~t------------------g-~~l~d~i~~------~~~~~~~W~~d~~~~~y~ 187 (414)
T PF02897_consen 133 PDGKRLAYSLSDGGSEWYTLRVFDLET------------------G-KFLPDGIEN------PKFSSVSWSDDGKGFFYT 187 (414)
T ss_dssp TTSSEEEEEEEETTSSEEEEEEEETTT------------------T-EEEEEEEEE------EESEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEecCCCCceEEEEEEECCC------------------C-cCcCCcccc------cccceEEEeCCCCEEEEE
Confidence 468888899999999988887777642 2 343332111 122348999999999999
Q ss_pred EeCCCCe------EEEEEEEECCCCCee--e---ccccCc-cceeEEecCC-eEEEEEeCCCCCCceEEEEECCCC---C
Q 006375 99 EDTKGDE------IYTVYVIDIETGTPV--G---KPLVGV-TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD---Q 162 (648)
Q Consensus 99 ~~~~G~e------~~~l~v~dl~~g~~~--~---~~~~~~-~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~---~ 162 (648)
....+.. ..+|+.+.+.++... . ...... ...+.+|+|+ .|+........ ..++|++++..+ .
T Consensus 188 ~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~-~s~v~~~d~~~~~~~~ 266 (414)
T PF02897_consen 188 RFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTS-ESEVYLLDLDDGGSPD 266 (414)
T ss_dssp ECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSS-EEEEEEEECCCTTTSS
T ss_pred EeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEcccc-CCeEEEEeccccCCCc
Confidence 8666544 789999999887543 1 111222 4458889999 76665554333 478999999874 2
Q ss_pred CCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccc-cccEEEEEECCCCC--cee-Eeeeccccee-eeEeecCCEEEEEe
Q 006375 163 SNDICLYHEKDDIYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPE--ELR-VLTPRVVGVD-TAASHRGNHFFITR 237 (648)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~-~~~~l~~~dl~~~~--~~~-~l~~~~~~~~-~~~s~dg~~l~~~~ 237 (648)
.....+....+.... .+... |..+++.++.. ....|+.+++++.. .++ .+.+...... -.++..+++|++..
T Consensus 267 ~~~~~l~~~~~~~~~-~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~ 343 (414)
T PF02897_consen 267 AKPKLLSPREDGVEY-YVDHH--GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSY 343 (414)
T ss_dssp -SEEEEEESSSS-EE-EEEEE--TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEE
T ss_pred CCcEEEeCCCCceEE-EEEcc--CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEE
Confidence 334444443332222 22222 55556666544 45799999999876 233 4555444433 34777889999888
Q ss_pred ccCCCCCcEEEEEeCC-CCCcceeEecCCCCcccceEE--EeCCEEEEEEecCC-eeEEEEEEcCC
Q 006375 238 RSDELFNSELLACPVD-NTSETTVLIPHRESVKLQDIQ--LFIDHLAVYEREGG-LQKITTYRLPA 299 (648)
Q Consensus 238 ~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~-~~~l~v~~~~~ 299 (648)
+.+ ...+|.++++. + . ....++......+.++. +..+.+.+.+..-. .+.++.+++..
T Consensus 344 ~~~--~~~~l~v~~~~~~-~-~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t 405 (414)
T PF02897_consen 344 REN--GSSRLRVYDLDDG-K-ESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLAT 405 (414)
T ss_dssp EET--TEEEEEEEETT-T-E-EEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTT
T ss_pred EEC--CccEEEEEECCCC-c-EEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 874 45689999987 3 2 22222222222233333 34466766665544 34677777773
No 159
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.50 E-value=0.00011 Score=75.57 Aligned_cols=251 Identities=13% Similarity=0.062 Sum_probs=121.9
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECC-CCCeee-c--cccCccceeEEecCCeEEEEEeCCCCCCceEEEEECC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE-TGTPVG-K--PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~-~g~~~~-~--~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
..+.+||||++|+.+.... ..|.+++++ +|+... . ...+....++++|||+.+|+.... ...|..+++.
T Consensus 38 ~~l~~spd~~~lyv~~~~~----~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~---~~~v~v~~~~ 110 (330)
T PRK11028 38 QPMVISPDKRHLYVGVRPE----FRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYN---ANCVSVSPLD 110 (330)
T ss_pred ccEEECCCCCEEEEEECCC----CcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcC---CCeEEEEEEC
Confidence 3568999999886654432 356667765 454321 1 122223458899999544554321 2456677765
Q ss_pred CCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCcee-------EeeecccceeeeEeecCCE
Q 006375 160 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR-------VLTPRVVGVDTAASHRGNH 232 (648)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~-------~l~~~~~~~~~~~s~dg~~ 232 (648)
+.......+...........+.++|||+++++... ....|+++|+++...+. .+.....-....++|||+.
T Consensus 111 ~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~--~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~ 188 (330)
T PRK11028 111 KDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCL--KEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQY 188 (330)
T ss_pred CCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeC--CCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCE
Confidence 43211111111111111234578999999986443 44678888886532121 1111111123458999997
Q ss_pred EEEEeccCCCCCcEEEEEeCCCC-Cccee---E--ecCCC--CcccceEE--EeCCEEEEEEecCCeeEEEEEEcCCCCC
Q 006375 233 FFITRRSDELFNSELLACPVDNT-SETTV---L--IPHRE--SVKLQDIQ--LFIDHLAVYEREGGLQKITTYRLPAVGE 302 (648)
Q Consensus 233 l~~~~~~~~~~~~~l~~~~~~~~-~~~~~---~--~~~~~--~~~~~~~~--~~~~~l~~~~~~~~~~~l~v~~~~~~g~ 302 (648)
+|..... . ..|..++++.. +..+. + ++... ......+. ++++++++. ..+...+.+++++..+.
T Consensus 189 lyv~~~~--~--~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~--~~~~~~I~v~~i~~~~~ 262 (330)
T PRK11028 189 AYCVNEL--N--SSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYAC--DRTASLISVFSVSEDGS 262 (330)
T ss_pred EEEEecC--C--CEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEe--cCCCCeEEEEEEeCCCC
Confidence 7665432 2 35555555421 12221 1 11110 01111233 444455544 33455788888865443
Q ss_pred cccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 303 PLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 303 ~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
.+..+ ..+.... ....+..++++..++++- ....--.+|..+..++.
T Consensus 263 ~~~~~---~~~~~~~---~p~~~~~~~dg~~l~va~-~~~~~v~v~~~~~~~g~ 309 (330)
T PRK11028 263 VLSFE---GHQPTET---QPRGFNIDHSGKYLIAAG-QKSHHISVYEIDGETGL 309 (330)
T ss_pred eEEEe---EEEeccc---cCCceEECCCCCEEEEEE-ccCCcEEEEEEcCCCCc
Confidence 22111 1111100 111244566777665543 22222345555656666
No 160
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=98.49 E-value=0.00026 Score=72.07 Aligned_cols=203 Identities=14% Similarity=0.124 Sum_probs=115.5
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee-ec---cccCccceeEEecCC-eEEEEEeCCCCCCceEE
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-GK---PLVGVTASVEWAGNE-ALVYITMDEILRPDKAW 154 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~-~~---~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~ 154 (648)
.+.+.-.++||.|-|+|= |+..-+|+|||....+.. .. .+.+....++|+.|+ +|+.+.... .+-.+++
T Consensus 59 ~~~vtVAkySPsG~yiAS-----GD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGr-erfg~~F 132 (603)
T KOG0318|consen 59 AHQVTVAKYSPSGFYIAS-----GDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGR-ERFGHVF 132 (603)
T ss_pred cceeEEEEeCCCceEEee-----cCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCc-cceeEEE
Confidence 355667799999998873 333448999997654432 21 334445569999999 998776532 1223333
Q ss_pred EEECCCCC-----------------C---------Cc--EEEEeecC----------CCeEEEEEeCCCCcEEEEEEccc
Q 006375 155 LHKLEADQ-----------------S---------ND--ICLYHEKD----------DIYSLGLQASESKKFLFIASESK 196 (648)
Q Consensus 155 ~~~l~~~~-----------------~---------~~--~~~~~~~~----------~~~~~~~~~s~Dg~~l~~~~~~~ 196 (648)
.++-++.. + +| ..+|+.+. ..|...+.+||||.+++-. .
T Consensus 133 ~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~---g 209 (603)
T KOG0318|consen 133 LWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATA---G 209 (603)
T ss_pred EecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEe---c
Confidence 43332210 0 11 12233221 1234457899999877532 2
Q ss_pred cccEEEEEECCCCCceeEeee---cccc-eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccce
Q 006375 197 ITRFVFYLDVSKPEELRVLTP---RVVG-VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQD 272 (648)
Q Consensus 197 ~~~~l~~~dl~~~~~~~~l~~---~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (648)
.+..+|++|-.+++..-.+.. ...+ ....|+||+.+++-.+... ..+|+-+.... -..+|.....-+.++.+
T Consensus 210 sDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDk---t~KIWdVs~~s-lv~t~~~~~~v~dqqvG 285 (603)
T KOG0318|consen 210 SDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADK---TIKIWDVSTNS-LVSTWPMGSTVEDQQVG 285 (603)
T ss_pred CCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCc---eEEEEEeeccc-eEEEeecCCchhceEEE
Confidence 346799999888872223331 1112 2245999999987776542 23555444332 22344554444445677
Q ss_pred EEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 273 IQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 273 ~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
.-|.+++|+.....+ .|..++.+
T Consensus 286 ~lWqkd~lItVSl~G---~in~ln~~ 308 (603)
T KOG0318|consen 286 CLWQKDHLITVSLSG---TINYLNPS 308 (603)
T ss_pred EEEeCCeEEEEEcCc---EEEEeccc
Confidence 788888887666543 34455554
No 161
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.48 E-value=4.1e-06 Score=82.91 Aligned_cols=113 Identities=19% Similarity=0.156 Sum_probs=73.2
Q ss_pred CCCcEEEEecCCCCCCCCCCCc-----hhHHHHHH-------CCCEEEEEccCCCC-C-CChhhhhcc-cc---cCCCCc
Q 006375 404 GSDPLLLYGYGSYEICNDPAFN-----SSRLSLLD-------RGFIFAIAQIRGGG-E-LGRQWYENG-KF---LKKKNT 465 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~~~~~-----~~~~~l~~-------~G~~v~~~~~rG~g-~-~g~~~~~~~-~~---~~~~~~ 465 (648)
.+..+||++|+-.|++...... ..+..++. .-|-|++.|+-|+. | .|..-.... .. .-...+
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 3457999999955533222110 12333333 35899999999875 2 232211111 10 112357
Q ss_pred HhHHHHHHHHHHHcCCCCCCeEE-EEeeChhHHHHHHHHhhCCCceeEEEecCC
Q 006375 466 FTDFIACAEYLIKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 518 (648)
Q Consensus 466 ~~D~~~~~~~l~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~ 518 (648)
+.|.+.+-+.|++.-.+ ++++ |+|.||||+.++..+..+||.++.+|..+.
T Consensus 129 i~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~ 180 (368)
T COG2021 129 IRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIAT 180 (368)
T ss_pred HHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecc
Confidence 89999999888776444 5665 999999999999999999998887766654
No 162
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.45 E-value=1.1e-06 Score=91.22 Aligned_cols=112 Identities=9% Similarity=0.029 Sum_probs=75.7
Q ss_pred CCCcEEEEecCCCCCCCCCCCchh-HHHHHHC--CCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcC
Q 006375 404 GSDPLLLYGYGSYEICNDPAFNSS-RLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 480 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~~~~~~~-~~~l~~~--G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 480 (648)
...|++|++||-........|... ...|..+ .+.|+++|.+|++... +..+.. .-...-.++.+.+++|.+..
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~--y~~a~~--~t~~vg~~la~lI~~L~~~~ 114 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQH--YPTSAA--YTKLVGKDVAKFVNWMQEEF 114 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCC--Cccccc--cHHHHHHHHHHHHHHHHHhh
Confidence 346899999995443322234432 3344432 6999999999877432 111110 00112256677777777554
Q ss_pred CCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCc
Q 006375 481 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 519 (648)
Q Consensus 481 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~ 519 (648)
..+.+++.++|+|+||.+++.++.+.|+++..+++..|.
T Consensus 115 gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 115 NYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred CCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 457799999999999999999999899999999988774
No 163
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.44 E-value=0.00034 Score=70.61 Aligned_cols=161 Identities=12% Similarity=0.165 Sum_probs=92.5
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccC-ccceeEEec--CC-eEEEEEeCC-------------
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG-VTASVEWAG--NE-ALVYITMDE------------- 146 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~-~~~~~~Wsp--Dg-~l~y~~~~~------------- 146 (648)
+..+||+.+.|.|..+ + .+|+.+|++|++.... .++. ......|+. |+ .++......
T Consensus 85 g~~~s~~~~~~~Yv~~--~---~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~ 159 (386)
T PF14583_consen 85 GGFLSPDDRALYYVKN--G---RSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFR 159 (386)
T ss_dssp T-EE-TTSSEEEEEET--T---TEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHH
T ss_pred ceEEecCCCeEEEEEC--C---CeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHH
Confidence 3578999999999764 2 2789999999887532 3333 334477863 44 444443311
Q ss_pred ----CCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCC-CCcEEEEEEccc---cccEEEEEECCCCCceeEeeec
Q 006375 147 ----ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESK---ITRFVFYLDVSKPEELRVLTPR 218 (648)
Q Consensus 147 ----~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~-Dg~~l~~~~~~~---~~~~l~~~dl~~~~~~~~l~~~ 218 (648)
....+.|+.+++.++ +.+.++++. .|.--+.+|| |...|.|..... -+.+||+++.++.. .+++..+
T Consensus 160 e~~~a~p~~~i~~idl~tG--~~~~v~~~~--~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~-~~~v~~~ 234 (386)
T PF14583_consen 160 EFYEARPHCRIFTIDLKTG--ERKVVFEDT--DWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSN-VKKVHRR 234 (386)
T ss_dssp HHHHC---EEEEEEETTT----EEEEEEES--S-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS----EESS--
T ss_pred HHHhhCCCceEEEEECCCC--ceeEEEecC--ccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCc-ceeeecC
Confidence 123578999999998 567788765 4544566777 455555543322 24689999998887 7777665
Q ss_pred cccee---eeEeecCCEEEEEeccCCCCCcEEEEEeCCCC
Q 006375 219 VVGVD---TAASHRGNHFFITRRSDELFNSELLACPVDNT 255 (648)
Q Consensus 219 ~~~~~---~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 255 (648)
..+.. -+|++||..|+|.+...+...+-|+.+++++.
T Consensus 235 ~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~ 274 (386)
T PF14583_consen 235 MEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTG 274 (386)
T ss_dssp -TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT-
T ss_pred CCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCC
Confidence 54433 24999999999987755556678999999874
No 164
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.44 E-value=1.1e-06 Score=82.10 Aligned_cols=118 Identities=19% Similarity=0.228 Sum_probs=86.1
Q ss_pred eEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcH
Q 006375 387 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 466 (648)
Q Consensus 387 ~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~ 466 (648)
-..|+.++.|... +.+|+|+++||-.-. ...|+...+.+++.||+|++|+.-.... ......+
T Consensus 31 pPkpLlI~tP~~~----G~yPVilF~HG~~l~--ns~Ys~lL~HIASHGfIVVAPQl~~~~~-----------p~~~~Ei 93 (307)
T PF07224_consen 31 PPKPLLIVTPSEA----GTYPVILFLHGFNLY--NSFYSQLLAHIASHGFIVVAPQLYTLFP-----------PDGQDEI 93 (307)
T ss_pred CCCCeEEecCCcC----CCccEEEEeechhhh--hHHHHHHHHHHhhcCeEEEechhhcccC-----------CCchHHH
Confidence 3567777777664 889999999994322 2235556678889999999998753211 2333556
Q ss_pred hHHHHHHHHHHHc--------CCCCCCeEEEEeeChhHHHHHHHHhhCC-C-ceeEEEecCCccc
Q 006375 467 TDFIACAEYLIKN--------CYCTKEKLCIEGRSAGGLLIGAVLNMRP-D-LFKAAVAAVPFVD 521 (648)
Q Consensus 467 ~D~~~~~~~l~~~--------~~~d~~~i~i~G~S~GG~l~~~~~~~~p-~-~~~a~v~~~~~~d 521 (648)
++...+++||... -..+.++++++|||.||-.|.++|..+. + .|.|+|..-|+.-
T Consensus 94 ~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 94 KSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred HHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 8888999999753 1257799999999999999998888662 2 4778887777643
No 165
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.44 E-value=2.5e-06 Score=83.25 Aligned_cols=213 Identities=16% Similarity=0.168 Sum_probs=116.0
Q ss_pred CCCcEEEEecCCCCCCCCCCCchhHHHHHHC-CCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCC
Q 006375 404 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 482 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 482 (648)
.+.|.++.+||-.|+.. .|......|+.. |--|+.+|+|-+|.....- ........+|+...++..... .
T Consensus 50 ~~~Pp~i~lHGl~GS~~--Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~-----~h~~~~ma~dv~~Fi~~v~~~--~ 120 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKE--NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT-----VHNYEAMAEDVKLFIDGVGGS--T 120 (315)
T ss_pred CCCCceEEecccccCCC--CHHHHHHHhcccccCceEEEecccCCCCcccc-----ccCHHHHHHHHHHHHHHcccc--c
Confidence 56899999999877663 345555566654 7899999999888653321 111222334444444443322 1
Q ss_pred CCCeEEEEeeChhH-HHHHHHHhhCCCceeEEEe-c-CC-cc--------ccccccc--CCCC---CC------------
Q 006375 483 TKEKLCIEGRSAGG-LLIGAVLNMRPDLFKAAVA-A-VP-FV--------DVLTTML--DPTI---PL------------ 533 (648)
Q Consensus 483 d~~~i~i~G~S~GG-~l~~~~~~~~p~~~~a~v~-~-~~-~~--------d~~~~~~--~~~~---~~------------ 533 (648)
--.++.+.|||||| -++++.....|+++..+|+ . +| .+ .++..+. +... +-
T Consensus 121 ~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~ 200 (315)
T KOG2382|consen 121 RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVG 200 (315)
T ss_pred ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHh
Confidence 23679999999999 5555555557876554443 2 23 11 1111111 1110 00
Q ss_pred ---Ccccc-------------ccc-CCC-CCHHHHHHHHcCC---ccccCCCCCCCeEEEeecCCCCccCCchHHHHHHH
Q 006375 534 ---TTAEW-------------EEW-GDP-WKEEFYFYMKSYS---PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAK 592 (648)
Q Consensus 534 ---~~~~~-------------~~~-g~~-~~~~~~~~~~~~s---p~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~ 592 (648)
...+| ..| ++. .-.+.+..+...+ .+.+ .....| +|+++|.++..|+..+-..+...
T Consensus 201 ~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~-~~~~~p-vlfi~g~~S~fv~~~~~~~~~~~ 278 (315)
T KOG2382|consen 201 FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLED-GPYTGP-VLFIKGLQSKFVPDEHYPRMEKI 278 (315)
T ss_pred cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccc-cccccc-eeEEecCCCCCcChhHHHHHHHh
Confidence 00000 001 111 0111222211222 2233 444677 99999999999997655555443
Q ss_pred HHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHh
Q 006375 593 LREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 636 (648)
Q Consensus 593 l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 636 (648)
.. ..++..++ ++||+...+.++.+.+. +..|+..+
T Consensus 279 fp----~~e~~~ld---~aGHwVh~E~P~~~~~~--i~~Fl~~~ 313 (315)
T KOG2382|consen 279 FP----NVEVHELD---EAGHWVHLEKPEEFIES--ISEFLEEP 313 (315)
T ss_pred cc----chheeecc---cCCceeecCCHHHHHHH--HHHHhccc
Confidence 33 34555664 79999988888766663 45577654
No 166
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.43 E-value=6e-06 Score=75.03 Aligned_cols=187 Identities=19% Similarity=0.198 Sum_probs=109.1
Q ss_pred cEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccC------CCCCCChhhhhccccc-CCC---CcHhHHHHHHHHH
Q 006375 407 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIR------GGGELGRQWYENGKFL-KKK---NTFTDFIACAEYL 476 (648)
Q Consensus 407 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~r------G~g~~g~~~~~~~~~~-~~~---~~~~D~~~~~~~l 476 (648)
-+||++||-..++.. +......+--+....++|.-. -.|..+..|.+...-. +.. ..+.-..+.+..|
T Consensus 4 atIi~LHglGDsg~~--~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSG--WAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred EEEEEEecCCCCCcc--HHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 489999994333322 222222222245555555321 2334445565432221 111 1222233334444
Q ss_pred HHc---CCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHHHHHHH
Q 006375 477 IKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYM 553 (648)
Q Consensus 477 ~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 553 (648)
+++ ..++++||++-|.|+||.++++++..+|.....++...++.--... . .|.
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~----~------------~~~-------- 137 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASI----G------------LPG-------- 137 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchh----h------------ccC--------
Confidence 433 3478999999999999999999999887655555555554321111 0 110
Q ss_pred HcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHH
Q 006375 554 KSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFL 633 (648)
Q Consensus 554 ~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 633 (648)
.-|-.+ .+|++..||+.|+.||..-..+..+.|+..+.. +.++..++-+|... .+ ++.+...|+
T Consensus 138 --~~~~~~-----~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~---~~f~~y~g~~h~~~---~~---e~~~~~~~~ 201 (206)
T KOG2112|consen 138 --WLPGVN-----YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVR---VTFKPYPGLGHSTS---PQ---ELDDLKSWI 201 (206)
T ss_pred --CccccC-----cchhheecccCCceeehHHHHHHHHHHHHcCCc---eeeeecCCcccccc---HH---HHHHHHHHH
Confidence 001101 335999999999999999999999999998866 56666668899532 22 333456777
Q ss_pred HH
Q 006375 634 MR 635 (648)
Q Consensus 634 ~~ 635 (648)
.+
T Consensus 202 ~~ 203 (206)
T KOG2112|consen 202 KT 203 (206)
T ss_pred HH
Confidence 65
No 167
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.42 E-value=4.1e-07 Score=80.98 Aligned_cols=209 Identities=14% Similarity=0.110 Sum_probs=116.6
Q ss_pred EEEEecCCCCCCCCCCCchhHHHHHHC-CCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCe
Q 006375 408 LLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 486 (648)
Q Consensus 408 ~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~ 486 (648)
.||.+-|.-|+.. ..|-+....+-.. -+.++..|.||=|-.-..-++ ..-+--.+|..+|++-.... +..+
T Consensus 44 ~iLlipGalGs~~-tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rk----f~~~ff~~Da~~avdLM~aL---k~~~ 115 (277)
T KOG2984|consen 44 YILLIPGALGSYK-TDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERK----FEVQFFMKDAEYAVDLMEAL---KLEP 115 (277)
T ss_pred eeEeccccccccc-ccCCHHHHhcCCCCceEEEEECCCCCCCCCCCccc----chHHHHHHhHHHHHHHHHHh---CCCC
Confidence 6777778766543 3466655544333 499999999964432111110 00011236777777776663 5589
Q ss_pred EEEEeeChhHHHHHHHHhhCCCceeEEEecCCc--ccccccccCCCCCCCccccc---------ccCCCCCHHHHHH---
Q 006375 487 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF--VDVLTTMLDPTIPLTTAEWE---------EWGDPWKEEFYFY--- 552 (648)
Q Consensus 487 i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~--~d~~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~~~--- 552 (648)
+.|+|+|-||..++-+|+++++.+...|....- ++-...|....+.- ...|. -||-...+..++.
T Consensus 116 fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRd-v~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD 194 (277)
T KOG2984|consen 116 FSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRD-VNKWSARGRQPYEDHYGPETFRTQWAAWVD 194 (277)
T ss_pred eeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHH-HhhhhhhhcchHHHhcCHHHHHHHHHHHHH
Confidence 999999999999999999999877765554432 12112221111110 01121 1221111111111
Q ss_pred -HHc---CCc----cccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHH
Q 006375 553 -MKS---YSP----VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLR 624 (648)
Q Consensus 553 -~~~---~sp----~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 624 (648)
+.+ +.- -.-+.+++|| +||+||..|+.|+-.+.--+ ..+.. -.++.+++ .++|...-...+.++
T Consensus 195 ~v~qf~~~~dG~fCr~~lp~vkcP-tli~hG~kDp~~~~~hv~fi-~~~~~---~a~~~~~p---eGkHn~hLrya~eFn 266 (277)
T KOG2984|consen 195 VVDQFHSFCDGRFCRLVLPQVKCP-TLIMHGGKDPFCGDPHVCFI-PVLKS---LAKVEIHP---EGKHNFHLRYAKEFN 266 (277)
T ss_pred HHHHHhhcCCCchHhhhcccccCC-eeEeeCCcCCCCCCCCccch-hhhcc---cceEEEcc---CCCcceeeechHHHH
Confidence 111 111 1235567999 99999999999987776433 33332 22333444 789976555555555
Q ss_pred HHHHHHHHHHH
Q 006375 625 EAAFTYTFLMR 635 (648)
Q Consensus 625 ~~~~~~~fl~~ 635 (648)
. .+.+||..
T Consensus 267 k--lv~dFl~~ 275 (277)
T KOG2984|consen 267 K--LVLDFLKS 275 (277)
T ss_pred H--HHHHHHhc
Confidence 5 45788764
No 168
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.40 E-value=0.00088 Score=65.67 Aligned_cols=224 Identities=13% Similarity=0.089 Sum_probs=118.1
Q ss_pred CceEEEecccccCCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCC-CCeeec------ccc----C----cc
Q 006375 64 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-GTPVGK------PLV----G----VT 128 (648)
Q Consensus 64 ~~~~lld~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~-g~~~~~------~~~----~----~~ 128 (648)
+.-.+++--.... ... ..+++++||++|..+.=-.| .|.|..+.. |..... +.. . ..
T Consensus 76 G~Lt~ln~~~~~g-~~p---~yvsvd~~g~~vf~AnY~~g----~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~ 147 (346)
T COG2706 76 GRLTFLNRQTLPG-SPP---CYVSVDEDGRFVFVANYHSG----SVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHV 147 (346)
T ss_pred CeEEEeeccccCC-CCC---eEEEECCCCCEEEEEEccCc----eEEEEEcccCCccccceeeeecCCCCCCccccCCcc
Confidence 3444555433322 222 35688999998866544333 677777754 433210 001 0 02
Q ss_pred ceeEEecCCeEEEEEeCCCCCCceEEEEECCCCCCCcEEEEee---cCCCeEEEEEeCCCCcEEEEEEccccccEEEEEE
Q 006375 129 ASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHE---KDDIYSLGLQASESKKFLFIASESKITRFVFYLD 205 (648)
Q Consensus 129 ~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d 205 (648)
....++||++++++.. ....+++.+++..+.-.......- ..++ -+.++|+|+++++...-.++-.+|-++
T Consensus 148 H~a~~tP~~~~l~v~D---LG~Dri~~y~~~dg~L~~~~~~~v~~G~GPR---Hi~FHpn~k~aY~v~EL~stV~v~~y~ 221 (346)
T COG2706 148 HSANFTPDGRYLVVPD---LGTDRIFLYDLDDGKLTPADPAEVKPGAGPR---HIVFHPNGKYAYLVNELNSTVDVLEYN 221 (346)
T ss_pred ceeeeCCCCCEEEEee---cCCceEEEEEcccCccccccccccCCCCCcc---eEEEcCCCcEEEEEeccCCEEEEEEEc
Confidence 3477899995445443 234458888887653222211111 1122 246899999988765544455666676
Q ss_pred CCCCC--ceeEeeecc-------cceeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCccee-EecCCCCcccceEEE
Q 006375 206 VSKPE--ELRVLTPRV-------VGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQL 275 (648)
Q Consensus 206 l~~~~--~~~~l~~~~-------~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 275 (648)
-..++ +++.+..-. ......+++||+.| +.+|+ +..-.-++.++.++ +.... -....+.....+|.+
T Consensus 222 ~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFL-YasNR-g~dsI~~f~V~~~~-g~L~~~~~~~teg~~PR~F~i 298 (346)
T COG2706 222 PAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFL-YASNR-GHDSIAVFSVDPDG-GKLELVGITPTEGQFPRDFNI 298 (346)
T ss_pred CCCceEEEeeeeccCccccCCCCceeEEEECCCCCEE-EEecC-CCCeEEEEEEcCCC-CEEEEEEEeccCCcCCcccee
Confidence 65565 222222111 12345699999855 56676 33334556666655 32222 111233334667777
Q ss_pred eCCEEEEEEecCCeeEEEEEEcCCCCCcc
Q 006375 276 FIDHLAVYEREGGLQKITTYRLPAVGEPL 304 (648)
Q Consensus 276 ~~~~l~~~~~~~~~~~l~v~~~~~~g~~~ 304 (648)
+.+.-+++........+.++..+...+.+
T Consensus 299 ~~~g~~Liaa~q~sd~i~vf~~d~~TG~L 327 (346)
T COG2706 299 NPSGRFLIAANQKSDNITVFERDKETGRL 327 (346)
T ss_pred CCCCCEEEEEccCCCcEEEEEEcCCCceE
Confidence 66433333333333458888887655544
No 169
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.40 E-value=0.00011 Score=76.00 Aligned_cols=202 Identities=14% Similarity=0.189 Sum_probs=103.1
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCC-CCeeec--cc------------cC-ccceeEEecCCeEEEEEeCCCC
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-GTPVGK--PL------------VG-VTASVEWAGNEALVYITMDEIL 148 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~-g~~~~~--~~------------~~-~~~~~~WspDg~l~y~~~~~~~ 148 (648)
.+.++|||++|..+--.+| .|.+++++. |..... .. .. ....+.++|||+.+|+..-
T Consensus 91 ~i~~~~~g~~l~vany~~g----~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dl--- 163 (345)
T PF10282_consen 91 HIAVDPDGRFLYVANYGGG----SVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDL--- 163 (345)
T ss_dssp EEEECTTSSEEEEEETTTT----EEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEET---
T ss_pred EEEEecCCCEEEEEEccCC----eEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEec---
Confidence 4678999999876654444 577777765 443211 01 11 1245889999955566542
Q ss_pred CCceEEEEECCCCCCCcE--EEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECC--CCCceeEe---eec---
Q 006375 149 RPDKAWLHKLEADQSNDI--CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS--KPEELRVL---TPR--- 218 (648)
Q Consensus 149 ~~~~l~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~--~~~~~~~l---~~~--- 218 (648)
....|+.++++....+-. .....+...---.+.++|||+++++.... .+.|.++++. ++. ++.+ ...
T Consensus 164 G~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~--s~~v~v~~~~~~~g~-~~~~~~~~~~~~~ 240 (345)
T PF10282_consen 164 GADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNEL--SNTVSVFDYDPSDGS-LTEIQTISTLPEG 240 (345)
T ss_dssp TTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETT--TTEEEEEEEETTTTE-EEEEEEEESCETT
T ss_pred CCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCC--CCcEEEEeecccCCc-eeEEEEeeecccc
Confidence 345688888876531111 11111111112245789999999876543 3555555554 443 2222 111
Q ss_pred c----cceeeeEeecCCEEEEEeccCCCCCcEEEEEeC--CCCCccee--EecCCCCcccceEEEe--CCEEEEEEecCC
Q 006375 219 V----VGVDTAASHRGNHFFITRRSDELFNSELLACPV--DNTSETTV--LIPHRESVKLQDIQLF--IDHLAVYEREGG 288 (648)
Q Consensus 219 ~----~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~--~~~l~~~~~~~~ 288 (648)
. ......++|||++||. +|+ +.. .|..+++ ++ +..+. .++.. +.....+.++ ++++++... .
T Consensus 241 ~~~~~~~~~i~ispdg~~lyv-snr-~~~--sI~vf~~d~~~-g~l~~~~~~~~~-G~~Pr~~~~s~~g~~l~Va~~--~ 312 (345)
T PF10282_consen 241 FTGENAPAEIAISPDGRFLYV-SNR-GSN--SISVFDLDPAT-GTLTLVQTVPTG-GKFPRHFAFSPDGRYLYVANQ--D 312 (345)
T ss_dssp SCSSSSEEEEEE-TTSSEEEE-EEC-TTT--EEEEEEECTTT-TTEEEEEEEEES-SSSEEEEEE-TTSSEEEEEET--T
T ss_pred ccccCCceeEEEecCCCEEEE-Eec-cCC--EEEEEEEecCC-CceEEEEEEeCC-CCCccEEEEeCCCCEEEEEec--C
Confidence 1 1123459999997655 555 233 4555554 33 23332 33322 2235667664 455555443 3
Q ss_pred eeEEEEEEcCCCCCcc
Q 006375 289 LQKITTYRLPAVGEPL 304 (648)
Q Consensus 289 ~~~l~v~~~~~~g~~~ 304 (648)
...+.+++++...+.+
T Consensus 313 s~~v~vf~~d~~tG~l 328 (345)
T PF10282_consen 313 SNTVSVFDIDPDTGKL 328 (345)
T ss_dssp TTEEEEEEEETTTTEE
T ss_pred CCeEEEEEEeCCCCcE
Confidence 4467777777545543
No 170
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.39 E-value=1e-05 Score=75.80 Aligned_cols=116 Identities=10% Similarity=0.045 Sum_probs=72.5
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
.+..++|||+|+.+|...... ...|.++|+++...... .......+.|||+| .++..... +...+|..+++.+
T Consensus 61 ~I~~~~WsP~g~~favi~g~~---~~~v~lyd~~~~~i~~~-~~~~~n~i~wsP~G~~l~~~g~~--n~~G~l~~wd~~~ 134 (194)
T PF08662_consen 61 PIHDVAWSPNGNEFAVIYGSM---PAKVTLYDVKGKKIFSF-GTQPRNTISWSPDGRFLVLAGFG--NLNGDLEFWDVRK 134 (194)
T ss_pred ceEEEEECcCCCEEEEEEccC---CcccEEEcCcccEeEee-cCCCceEEEECCCCCEEEEEEcc--CCCcEEEEEECCC
Confidence 378999999999998875322 23788999973333321 12234469999999 77776653 2335577888774
Q ss_pred CCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEcc---ccccEEEEEECCC
Q 006375 161 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASES---KITRFVFYLDVSK 208 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~---~~~~~l~~~dl~~ 208 (648)
. ..+.... ......+.|||||++++..+.. +.++.+.+++..+
T Consensus 135 ~----~~i~~~~-~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G 180 (194)
T PF08662_consen 135 K----KKISTFE-HSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQG 180 (194)
T ss_pred C----EEeeccc-cCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEecC
Confidence 3 2333222 2234578999999999875542 1234444555443
No 171
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.38 E-value=1.2e-05 Score=75.20 Aligned_cols=174 Identities=21% Similarity=0.233 Sum_probs=96.5
Q ss_pred CCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCC--CCCCeEEEEeeChhHHHHHHHHhhC------
Q 006375 435 GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY--CTKEKLCIEGRSAGGLLIGAVLNMR------ 506 (648)
Q Consensus 435 G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~--~d~~~i~i~G~S~GG~l~~~~~~~~------ 506 (648)
-+.++.+.++|.+.. .+..-++|+.+.++.|...-. .-....++.||||||.+|..++.+.
T Consensus 33 ~iel~avqlPGR~~r-----------~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~ 101 (244)
T COG3208 33 DIELLAVQLPGRGDR-----------FGEPLLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLP 101 (244)
T ss_pred hhheeeecCCCcccc-----------cCCcccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCC
Confidence 488999999986642 112234677777777665422 2335799999999999998887652
Q ss_pred CCceeEEEecCCcccccccccCCCCCCCcccc----ccc-CCC----CCHHHH-----------HHHHcCCccccCCCCC
Q 006375 507 PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW----EEW-GDP----WKEEFY-----------FYMKSYSPVDNVKAQN 566 (648)
Q Consensus 507 p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~----~~~-g~~----~~~~~~-----------~~~~~~sp~~~~~~~~ 566 (648)
|..+-...+.+|..+.-... ......++ .++ |.| ++++.. ..+..|.-... ..++
T Consensus 102 p~~lfisg~~aP~~~~~~~i----~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~-~pl~ 176 (244)
T COG3208 102 PRALFISGCRAPHYDRGKQI----HHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPPP-APLA 176 (244)
T ss_pred cceEEEecCCCCCCcccCCc----cCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCC-CCcC
Confidence 22222233444522221111 11111111 222 444 344432 22223332222 3458
Q ss_pred CCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHhcC
Q 006375 567 YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 638 (648)
Q Consensus 567 ~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 638 (648)
+| +.++.|++|..|...+...+.+.. +...++.++ .+||+......+ ..++++.++++
T Consensus 177 ~p-i~~~~G~~D~~vs~~~~~~W~~~t---~~~f~l~~f----dGgHFfl~~~~~------~v~~~i~~~l~ 234 (244)
T COG3208 177 CP-IHAFGGEKDHEVSRDELGAWREHT---KGDFTLRVF----DGGHFFLNQQRE------EVLARLEQHLA 234 (244)
T ss_pred cc-eEEeccCcchhccHHHHHHHHHhh---cCCceEEEe----cCcceehhhhHH------HHHHHHHHHhh
Confidence 88 999999999998755444444443 335555666 689987654432 23456666664
No 172
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.38 E-value=1e-05 Score=85.87 Aligned_cols=84 Identities=17% Similarity=0.129 Sum_probs=62.0
Q ss_pred hhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHh----HHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHH
Q 006375 426 SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFT----DFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 501 (648)
Q Consensus 426 ~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~----D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 501 (648)
.....|+++|+.|++++.|.-+...+. ..++ .+.+|++.+.+. +...+|-++|+|+||.+++.
T Consensus 238 SlVr~lv~qG~~VflIsW~nP~~~~r~-----------~~ldDYv~~i~~Ald~V~~~--tG~~~vnl~GyC~GGtl~a~ 304 (560)
T TIGR01839 238 SFVQYCLKNQLQVFIISWRNPDKAHRE-----------WGLSTYVDALKEAVDAVRAI--TGSRDLNLLGACAGGLTCAA 304 (560)
T ss_pred hHHHHHHHcCCeEEEEeCCCCChhhcC-----------CCHHHHHHHHHHHHHHHHHh--cCCCCeeEEEECcchHHHHH
Confidence 346789999999999999875532222 2334 445566666554 45689999999999998886
Q ss_pred ----HHhhCCC-ceeEEEecCCcccc
Q 006375 502 ----VLNMRPD-LFKAAVAAVPFVDV 522 (648)
Q Consensus 502 ----~~~~~p~-~~~a~v~~~~~~d~ 522 (648)
+++++++ .++.+++.+..+|.
T Consensus 305 ~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 305 LVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred HHHHHHhcCCCCceeeEEeeeccccc
Confidence 6777775 79999988877774
No 173
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=98.37 E-value=0.00021 Score=67.13 Aligned_cols=194 Identities=13% Similarity=0.103 Sum_probs=116.3
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC--ccceeEEecCC-eEEEEEeCCCCCCceEEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~--~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~ 157 (648)
..+....+|+||++ |++...+| .+++||+++|+....-... ...++++++|+ +|. +... ...+..++
T Consensus 64 H~v~dv~~s~dg~~-alS~swD~----~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qiv-SGSr----DkTiklwn 133 (315)
T KOG0279|consen 64 HFVSDVVLSSDGNF-ALSASWDG----TLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIV-SGSR----DKTIKLWN 133 (315)
T ss_pred eEecceEEccCCce-EEeccccc----eEEEEEecCCcEEEEEEecCCceEEEEecCCCceee-cCCC----cceeeeee
Confidence 56778999999996 55555444 8999999999766432211 24569999999 664 4332 23355555
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCC-cEEEEEEccccccEEEEEECCCCCceeEeeecccc-e-eeeEeecCCEEE
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESK-KFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-V-DTAASHRGNHFF 234 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg-~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~-~~~~s~dg~~l~ 234 (648)
.-+. -...+.++....|..-+.|+|.. .-++++.. -+.-+-++|+++-+ .+.......+ + ...+||||..+.
T Consensus 134 t~g~--ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s--~DktvKvWnl~~~~-l~~~~~gh~~~v~t~~vSpDGslca 208 (315)
T KOG0279|consen 134 TLGV--CKYTIHEDSHREWVSCVRFSPNESNPIIVSAS--WDKTVKVWNLRNCQ-LRTTFIGHSGYVNTVTVSPDGSLCA 208 (315)
T ss_pred eccc--EEEEEecCCCcCcEEEEEEcCCCCCcEEEEcc--CCceEEEEccCCcc-hhhccccccccEEEEEECCCCCEEe
Confidence 5443 12233332224566567899986 33443332 23457778888765 3332222222 2 245999998553
Q ss_pred EEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 006375 235 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 299 (648)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~ 299 (648)
. +....+++..|++.... +..-+....+.++.+.++..++....+ ..+.+++++.
T Consensus 209 s-----Ggkdg~~~LwdL~~~k~---lysl~a~~~v~sl~fspnrywL~~at~--~sIkIwdl~~ 263 (315)
T KOG0279|consen 209 S-----GGKDGEAMLWDLNEGKN---LYSLEAFDIVNSLCFSPNRYWLCAATA--TSIKIWDLES 263 (315)
T ss_pred c-----CCCCceEEEEEccCCce---eEeccCCCeEeeEEecCCceeEeeccC--CceEEEeccc
Confidence 3 33457899999976322 333333345777888888776665443 3478888884
No 174
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.36 E-value=0.00065 Score=70.40 Aligned_cols=253 Identities=15% Similarity=0.101 Sum_probs=123.9
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
.....+||||+++ |..+++| .|.++|+.+++.... .......+++.|+|| +++.... .+..+..+|..+
T Consensus 39 h~~~~~s~Dgr~~-yv~~rdg----~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~----~~~~v~v~D~~t 109 (369)
T PF02239_consen 39 HAGLKFSPDGRYL-YVANRDG----TVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANY----EPGTVSVIDAET 109 (369)
T ss_dssp EEEEE-TT-SSEE-EEEETTS----EEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEE----ETTEEEEEETTT
T ss_pred eeEEEecCCCCEE-EEEcCCC----eEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEec----CCCceeEecccc
Confidence 4567899999985 4555655 689999999997643 222234569999999 5544433 234577888776
Q ss_pred CCCCcEEEEeecC-----CCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCce--eEeeecccceeeeEeecCCEE
Q 006375 161 DQSNDICLYHEKD-----DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL--RVLTPRVVGVDTAASHRGNHF 233 (648)
Q Consensus 161 ~~~~~~~~~~~~~-----~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~--~~l~~~~~~~~~~~s~dg~~l 233 (648)
.+. -..+-.... ..-...+.-++++...+++. +...+||++|..+.+.+ +.+.....-.+..|+|+|+++
T Consensus 110 le~-v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~l--kd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~ 186 (369)
T PF02239_consen 110 LEP-VKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNL--KDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYF 186 (369)
T ss_dssp --E-EEEEE--EE-TTTS---EEEEEE-SSSSEEEEEE--TTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEE
T ss_pred ccc-eeecccccccccccCCCceeEEecCCCCEEEEEE--ccCCeEEEEEeccccccceeeecccccccccccCccccee
Confidence 521 111211110 11123455578877655543 34579999998876511 222222222445699999988
Q ss_pred EEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCc---ccceEEEeCCEEEEEEecCCeeEEEEEEcCCCC-CcccccCC
Q 006375 234 FITRRSDELFNSELLACPVDNTSETTVLIPHRESV---KLQDIQLFIDHLAVYEREGGLQKITTYRLPAVG-EPLKSLQG 309 (648)
Q Consensus 234 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g-~~~~~l~~ 309 (648)
+...+.. -++..+|.++ .....++...... ....+-..+-+.+......+...+-.+..+... .....+..
T Consensus 187 ~va~~~s----n~i~viD~~~-~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkv 261 (369)
T PF02239_consen 187 LVAANGS----NKIAVIDTKT-GKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKV 261 (369)
T ss_dssp EEEEGGG----TEEEEEETTT-TEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSE
T ss_pred eeccccc----ceeEEEeecc-ceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeE
Confidence 7776652 2788888876 3333333322111 122232233345555444444433444333211 00011111
Q ss_pred CceeecCCCeeeeeCCCCcccccEEEEE-EeeCCCCCEEEEEECCCCc
Q 006375 310 GKSVEFIDPVYSIDPSESVFSSRILRFH-YSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 310 ~~~i~~~~~~~~v~~~~~~~~~~~l~~~-~ss~~~P~~~~~~d~~~~~ 356 (648)
.+.|....+. + .+..++++..+++. +.++. -..+..+|.++.+
T Consensus 262 v~~I~~~G~g--l-Fi~thP~s~~vwvd~~~~~~-~~~v~viD~~tl~ 305 (369)
T PF02239_consen 262 VKTIPTQGGG--L-FIKTHPDSRYVWVDTFLNPD-ADTVQVIDKKTLK 305 (369)
T ss_dssp EEEEE-SSSS-----EE--TT-SEEEEE-TT-SS-HT-EEEEECCGTE
T ss_pred EEEEECCCCc--c-eeecCCCCccEEeeccCCCC-CceEEEEECcCcc
Confidence 1234433222 1 12346788877776 33333 4679999988875
No 175
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.34 E-value=8.2e-06 Score=80.04 Aligned_cols=101 Identities=19% Similarity=0.150 Sum_probs=65.5
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHC--CCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCC
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 483 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~--G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 483 (648)
.|.|+++||.++...... .....+... .|.++.+|.||.|... .. ........+.++.+.+.-..
T Consensus 21 ~~~i~~~hg~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~g~g~s~----~~------~~~~~~~~~~~~~~~~~~~~- 87 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWR--PVFKVLPALAARYRVIAPDLRGHGRSD----PA------GYSLSAYADDLAALLDALGL- 87 (282)
T ss_pred CCeEEEeCCCCCchhhhH--HHHHHhhccccceEEEEecccCCCCCC----cc------cccHHHHHHHHHHHHHHhCC-
Confidence 459999999876544332 211222221 1999999999887654 00 11112223333333333222
Q ss_pred CCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 006375 484 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 520 (648)
Q Consensus 484 ~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~ 520 (648)
.++.++|+|+||.++..++.++|+.++++|+..+..
T Consensus 88 -~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 88 -EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred -CceEEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 349999999999999999999999999998887653
No 176
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.34 E-value=0.0006 Score=66.83 Aligned_cols=223 Identities=14% Similarity=0.125 Sum_probs=125.0
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEe-cCCeEEEEEeCCCCCCceEEEEECCCCCC
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWA-GNEALVYITMDEILRPDKAWLHKLEADQS 163 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~Ws-pDg~l~y~~~~~~~~~~~l~~~~l~~~~~ 163 (648)
+|.|.+....|.|+--.+| +|+.+++++++......+... ++... +||.+++.... .+.+.++.++
T Consensus 4 gp~~d~~~g~l~~~D~~~~----~i~~~~~~~~~~~~~~~~~~~-G~~~~~~~g~l~v~~~~------~~~~~d~~~g-- 70 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGG----RIYRVDPDTGEVEVIDLPGPN-GMAFDRPDGRLYVADSG------GIAVVDPDTG-- 70 (246)
T ss_dssp EEEEETTTTEEEEEETTTT----EEEEEETTTTEEEEEESSSEE-EEEEECTTSEEEEEETT------CEEEEETTTT--
T ss_pred ceEEECCCCEEEEEEcCCC----EEEEEECCCCeEEEEecCCCc-eEEEEccCCEEEEEEcC------ceEEEecCCC--
Confidence 6889886666655533333 899999999887654444433 46666 67677665431 2455587776
Q ss_pred CcEEEEeec-C---CCeEEEEEeCCCCcEEEEEEcccc----c--cEEEEEECCCCCceeEeeecccc-eeeeEeecCCE
Q 006375 164 NDICLYHEK-D---DIYSLGLQASESKKFLFIASESKI----T--RFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNH 232 (648)
Q Consensus 164 ~~~~~~~~~-~---~~~~~~~~~s~Dg~~l~~~~~~~~----~--~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~ 232 (648)
+-+.+.... . .....++.+.+||+ |+++..... . ..||+++.+ ++ .+.+...... .-..|+|||+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~-~~~~~~~~~~pNGi~~s~dg~~ 147 (246)
T PF08450_consen 71 KVTVLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GK-VTVVADGLGFPNGIAFSPDGKT 147 (246)
T ss_dssp EEEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SE-EEEEEEEESSEEEEEEETTSSE
T ss_pred cEEEEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-Ce-EEEEecCcccccceEECCcchh
Confidence 334444432 1 22344788999998 666543321 1 679999998 54 4544433322 22459999998
Q ss_pred EEEEeccCCCCCcEEEEEeCCCCCc----ceeEecCCC-CcccceEEEeCC-EEEEEEecCCeeEEEEEEcCCCCCcccc
Q 006375 233 FFITRRSDELFNSELLACPVDNTSE----TTVLIPHRE-SVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEPLKS 306 (648)
Q Consensus 233 l~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~-~l~~~~~~~~~~~l~v~~~~~~g~~~~~ 306 (648)
||+.... +.+|++++++..+. .+.+..... .....++.++.+ .+++... +..++.+++.+ |..+
T Consensus 148 lyv~ds~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~--~~~~I~~~~p~--G~~~-- 217 (246)
T PF08450_consen 148 LYVADSF----NGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADW--GGGRIVVFDPD--GKLL-- 217 (246)
T ss_dssp EEEEETT----TTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEE--TTTEEEEEETT--SCEE--
T ss_pred eeecccc----cceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEc--CCCEEEEECCC--ccEE--
Confidence 8876443 35799998864222 121222222 224778888876 4444443 33578888776 5533
Q ss_pred cCCCceeecCCCeeeeeCCCC-cccccEEEEEEe
Q 006375 307 LQGGKSVEFIDPVYSIDPSES-VFSSRILRFHYS 339 (648)
Q Consensus 307 l~~~~~i~~~~~~~~v~~~~~-~~~~~~l~~~~s 339 (648)
..+.+|.+. .....+ .++.+.|+++.+
T Consensus 218 ----~~i~~p~~~--~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 218 ----REIELPVPR--PTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp ----EEEE-SSSS--EEEEEEESTTSSEEEEEEB
T ss_pred ----EEEcCCCCC--EEEEEEECCCCCEEEEEeC
Confidence 345555321 111111 235566766643
No 177
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.32 E-value=0.00062 Score=67.26 Aligned_cols=236 Identities=18% Similarity=0.159 Sum_probs=129.8
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cc-cCccceeEEecCC-eEEEEEeCCCCCCceEEEEEC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l 158 (648)
.+..+.|+|+|++|+.... + ..|+++++.+++.... .. ......+.|+|++ .++.... ...|+.+++
T Consensus 11 ~i~~~~~~~~~~~l~~~~~-~----g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----~~~i~i~~~ 80 (289)
T cd00200 11 GVTCVAFSPDGKLLATGSG-D----GTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSS-----DKTIRLWDL 80 (289)
T ss_pred CEEEEEEcCCCCEEEEeec-C----cEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcC-----CCeEEEEEc
Confidence 4678899999999988764 2 3788999988764322 11 1223468999999 6655433 345888888
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc-eeeeEeecCCEEEEEe
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITR 237 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~ 237 (648)
.++ +....+.... .....+.|+++++.++... ....|+++|+.+++....+...... ....++|++..++..+
T Consensus 81 ~~~--~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 154 (289)
T cd00200 81 ETG--ECVRTLTGHT-SYVSSVAFSPDGRILSSSS---RDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSS 154 (289)
T ss_pred Ccc--cceEEEeccC-CcEEEEEEcCCCCEEEEec---CCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEc
Confidence 765 2233333322 2344678999977665433 3467889998865512223222222 2345888876554443
Q ss_pred ccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeec
Q 006375 238 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEF 315 (648)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~ 315 (648)
.. ..|..+|+....... .+... ...+..+.+.++ .+++... ...+.++++.. +.....+. ..
T Consensus 155 ~~-----~~i~i~d~~~~~~~~-~~~~~-~~~i~~~~~~~~~~~l~~~~~---~~~i~i~d~~~-~~~~~~~~-----~~ 218 (289)
T cd00200 155 QD-----GTIKLWDLRTGKCVA-TLTGH-TGEVNSVAFSPDGEKLLSSSS---DGTIKLWDLST-GKCLGTLR-----GH 218 (289)
T ss_pred CC-----CcEEEEEccccccce-eEecC-ccccceEEECCCcCEEEEecC---CCcEEEEECCC-Cceecchh-----hc
Confidence 22 357777876432222 23222 223566777665 4444433 34677888763 22111110 11
Q ss_pred CCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 316 IDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 316 ~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
+. .+..+.++++ +.+++..+ ..+.++.+++.+++
T Consensus 219 ~~---~i~~~~~~~~-~~~~~~~~---~~~~i~i~~~~~~~ 252 (289)
T cd00200 219 EN---GVNSVAFSPD-GYLLASGS---EDGTIRVWDLRTGE 252 (289)
T ss_pred CC---ceEEEEEcCC-CcEEEEEc---CCCcEEEEEcCCce
Confidence 11 1222333444 33444333 34678888887655
No 178
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.31 E-value=3.5e-05 Score=76.43 Aligned_cols=122 Identities=15% Similarity=0.046 Sum_probs=78.6
Q ss_pred EEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccc--------cCC
Q 006375 391 ICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF--------LKK 462 (648)
Q Consensus 391 ~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~--------~~~ 462 (648)
..++.|+.. .....|++|++.|-............+..|++.|+..++....-.|..=..- +.+.. ...
T Consensus 79 ~~~~~P~~~--~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~-Q~~s~l~~VsDl~~~g 155 (348)
T PF09752_consen 79 FQLLLPKRW--DSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKD-QRRSSLRNVSDLFVMG 155 (348)
T ss_pred EEEEECCcc--ccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhH-hhcccccchhHHHHHH
Confidence 444666653 2245799999998433332222333356778889998888765433211110 00000 112
Q ss_pred CCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCC
Q 006375 463 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 518 (648)
Q Consensus 463 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~ 518 (648)
...+.+..+.+.|+.++|+ .++++.|.||||.+|..++...|..+.++-+.++
T Consensus 156 ~~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~ 208 (348)
T PF09752_consen 156 RATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPVALVPCLSW 208 (348)
T ss_pred hHHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCceeEEEeecc
Confidence 2466788889999999987 6999999999999999999988886665555554
No 179
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.31 E-value=2.6e-06 Score=78.64 Aligned_cols=215 Identities=15% Similarity=0.183 Sum_probs=110.8
Q ss_pred EeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCC--C--hhhhhc
Q 006375 381 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL--G--RQWYEN 456 (648)
Q Consensus 381 ~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~--g--~~~~~~ 456 (648)
+.-.+|.+|..|-..|++. ...++|+||...| |+..+. .|...+.+|+..||.|+.+|.--+=|. | .+|..
T Consensus 7 i~~~~~~~I~vwet~P~~~--~~~~~~tiliA~G-f~rrmd-h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftm- 81 (294)
T PF02273_consen 7 IRLEDGRQIRVWETRPKNN--EPKRNNTILIAPG-FARRMD-HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTM- 81 (294)
T ss_dssp EEETTTEEEEEEEE---TT--S---S-EEEEE-T-T-GGGG-GGHHHHHHHHTTT--EEEE---B-------------H-
T ss_pred eEcCCCCEEEEeccCCCCC--CcccCCeEEEecc-hhHHHH-HHHHHHHHHhhCCeEEEeccccccccCCCCChhhcch-
Confidence 4457899999998888874 4567899999987 565554 477788899999999999986432211 1 11111
Q ss_pred ccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccC---C-CCC
Q 006375 457 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD---P-TIP 532 (648)
Q Consensus 457 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~---~-~~~ 532 (648)
....+|+..+++||...|. .+++++..|.-|-+|...+++ ++ ..-+|..+|++|+..+... . -+.
T Consensus 82 ------s~g~~sL~~V~dwl~~~g~---~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVGVVnlr~TLe~al~~Dyl~ 150 (294)
T PF02273_consen 82 ------SIGKASLLTVIDWLATRGI---RRIGLIAASLSARIAYEVAAD-IN-LSFLITAVGVVNLRDTLEKALGYDYLQ 150 (294)
T ss_dssp ------HHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-HHHHHHHHHSS-GGG
T ss_pred ------HHhHHHHHHHHHHHHhcCC---CcchhhhhhhhHHHHHHHhhc-cC-cceEEEEeeeeeHHHHHHHHhccchhh
Confidence 0123789999999998774 689999999999999999994 54 6778888899997654310 0 000
Q ss_pred CCccccc---cc-CCCCCHHHH--HHH-HcCCc----cccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCC
Q 006375 533 LTTAEWE---EW-GDPWKEEFY--FYM-KSYSP----VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDN 601 (648)
Q Consensus 533 ~~~~~~~---~~-g~~~~~~~~--~~~-~~~sp----~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~ 601 (648)
+...+.. ++ |---+.+.| ..+ ..+.+ ...++..++| ++..++.+|.-|...+..++...+... .++
T Consensus 151 ~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP-~iaF~A~~D~WV~q~eV~~~~~~~~s~--~~k 227 (294)
T PF02273_consen 151 LPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIP-FIAFTANDDDWVKQSEVEELLDNINSN--KCK 227 (294)
T ss_dssp S-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S--EEEEEETT-TTS-HHHHHHHHTT-TT----EE
T ss_pred cchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCC-EEEEEeCCCccccHHHHHHHHHhcCCC--cee
Confidence 0000000 00 110011111 011 12222 3457777898 999999999988877666665554432 222
Q ss_pred eEEEEecCCCCccCCC
Q 006375 602 ILLFKCELGAGHFSKS 617 (648)
Q Consensus 602 ~~~~~~~~~~gH~~~~ 617 (648)
+..+ .|+.|--..
T Consensus 228 lysl---~Gs~HdL~e 240 (294)
T PF02273_consen 228 LYSL---PGSSHDLGE 240 (294)
T ss_dssp EEEE---TT-SS-TTS
T ss_pred EEEe---cCccchhhh
Confidence 3333 399995543
No 180
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.26 E-value=0.00088 Score=69.25 Aligned_cols=258 Identities=17% Similarity=0.159 Sum_probs=124.8
Q ss_pred eeEEeCCCCCEEEEEEeCC-CCeEEEEEEEECCCCCeeec-cc--cC-ccceeEEecCC-eEEEEEeCCCCCCceEEEEE
Q 006375 84 GCFQVSPDNKLVAYAEDTK-GDEIYTVYVIDIETGTPVGK-PL--VG-VTASVEWAGNE-ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~-G~e~~~l~v~dl~~g~~~~~-~~--~~-~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~ 157 (648)
+.+.+||++++|..+.... .......+-++-++|+.... .. .+ .-..++.+||+ .++...+. ...|..++
T Consensus 40 s~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~----~g~v~v~~ 115 (345)
T PF10282_consen 40 SWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYG----GGSVSVFP 115 (345)
T ss_dssp CCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETT----TTEEEEEE
T ss_pred ceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEcc----CCeEEEEE
Confidence 4677899998765444321 22244455555555655422 11 22 12337778999 55444332 23466777
Q ss_pred CCCCCCCcEE--EEe----ec-----CCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeE---ee-ecccc
Q 006375 158 LEADQSNDIC--LYH----EK-----DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRV---LT-PRVVG 221 (648)
Q Consensus 158 l~~~~~~~~~--~~~----~~-----~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~---l~-~~~~~ 221 (648)
+.....-... ++. .. .......+.++|||+++++... +...|++++++... .+.. +. +...+
T Consensus 116 l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dl--G~D~v~~~~~~~~~~~l~~~~~~~~~~G~G 193 (345)
T PF10282_consen 116 LDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDL--GADRVYVYDIDDDTGKLTPVDSIKVPPGSG 193 (345)
T ss_dssp ECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEET--TTTEEEEEEE-TTS-TEEEEEEEECSTTSS
T ss_pred ccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEec--CCCEEEEEEEeCCCceEEEeeccccccCCC
Confidence 7654211111 111 11 1123345788999999987543 44567777776543 1322 11 11112
Q ss_pred -eeeeEeecCCEEEEEeccCCCCCcEEEEEeCC--CCCccee-----EecCCCC--cccceEEEeCCEEEEEEecCCeeE
Q 006375 222 -VDTAASHRGNHFFITRRSDELFNSELLACPVD--NTSETTV-----LIPHRES--VKLQDIQLFIDHLAVYEREGGLQK 291 (648)
Q Consensus 222 -~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~--~~~~~~~-----~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~ 291 (648)
....++|+|+.+|++... . ..|..++++ . +..+. .++.... ....++.+.+|+-+++..+.+...
T Consensus 194 PRh~~f~pdg~~~Yv~~e~--s--~~v~v~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~s 268 (345)
T PF10282_consen 194 PRHLAFSPDGKYAYVVNEL--S--NTVSVFDYDPSD-GSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNS 268 (345)
T ss_dssp EEEEEE-TTSSEEEEEETT--T--TEEEEEEEETTT-TEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTE
T ss_pred CcEEEEcCCcCEEEEecCC--C--CcEEEEeecccC-CceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCE
Confidence 235699999988777554 2 244444443 3 22221 2222111 123445555443333334445678
Q ss_pred EEEEEcCCCCCcccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCcEE
Q 006375 292 ITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISV 358 (648)
Q Consensus 292 l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~ 358 (648)
|.+++++..++.+..+ ..+..... .-..+..+++++.+++ ......--.+|+.|.++|++.
T Consensus 269 I~vf~~d~~~g~l~~~---~~~~~~G~--~Pr~~~~s~~g~~l~V-a~~~s~~v~vf~~d~~tG~l~ 329 (345)
T PF10282_consen 269 ISVFDLDPATGTLTLV---QTVPTGGK--FPRHFAFSPDGRYLYV-ANQDSNTVSVFDIDPDTGKLT 329 (345)
T ss_dssp EEEEEECTTTTTEEEE---EEEEESSS--SEEEEEE-TTSSEEEE-EETTTTEEEEEEEETTTTEEE
T ss_pred EEEEEEecCCCceEEE---EEEeCCCC--CccEEEEeCCCCEEEE-EecCCCeEEEEEEeCCCCcEE
Confidence 8999996544444321 11111000 0112445677775554 333334456778888899844
No 181
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.23 E-value=8.5e-06 Score=78.54 Aligned_cols=191 Identities=12% Similarity=0.014 Sum_probs=109.6
Q ss_pred eEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHC----CCEEEEEccCCCCCCChhhhhcccccCC
Q 006375 387 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR----GFIFAIAQIRGGGELGRQWYENGKFLKK 462 (648)
Q Consensus 387 ~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~----G~~v~~~~~rG~g~~g~~~~~~~~~~~~ 462 (648)
.+....++.|++. ....|+|+++..||-....... -......|+.. .-+++.+|+----.....++
T Consensus 80 ~~~~~vv~lppgy-~~~~k~pvl~~~DG~~~~~~g~-i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~-------- 149 (299)
T COG2382 80 SERRRVVYLPPGY-NPLEKYPVLYLQDGQDWFRSGR-IPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH-------- 149 (299)
T ss_pred cceeEEEEeCCCC-CccccccEEEEeccHHHHhcCC-hHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc--------
Confidence 3455566788887 6678899999999843222211 11122345543 56777777632111111111
Q ss_pred CCcHhHHHH-----HHHHHHHcC--CCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCc
Q 006375 463 KNTFTDFIA-----CAEYLIKNC--YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTT 535 (648)
Q Consensus 463 ~~~~~D~~~-----~~~~l~~~~--~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~ 535 (648)
..+++.. .+=++.+.. .-++++-+++|.|+||..+++++.++|+.|..+++.+|.++..-.. ..
T Consensus 150 --~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~---~~---- 220 (299)
T COG2382 150 --CNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLD---TQ---- 220 (299)
T ss_pred --ccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccc---cc----
Confidence 1122221 122333332 2367889999999999999999999999999999999987643110 00
Q ss_pred ccccccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccC
Q 006375 536 AEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 615 (648)
Q Consensus 536 ~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~ 615 (648)
.++. .. ...+-++-+..... -++...++.+...++ .+.+.+.|+..+.+...-.| .+||-.
T Consensus 221 ---~~~~------~~---~~l~~~~a~~~~~~-~~l~~g~~~~~~~~p--Nr~L~~~L~~~g~~~~yre~----~GgHdw 281 (299)
T COG2382 221 ---PQGE------VA---ESLKILHAIGTDER-IVLTTGGEEGDFLRP--NRALAAQLEKKGIPYYYREY----PGGHDW 281 (299)
T ss_pred ---cccc------hh---hhhhhhhccCccce-EEeecCCccccccch--hHHHHHHHHhcCCcceeeec----CCCCch
Confidence 1110 11 11112222222222 367777777776654 57788999998887643334 349943
No 182
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.23 E-value=8.7e-06 Score=78.54 Aligned_cols=134 Identities=20% Similarity=0.199 Sum_probs=97.3
Q ss_pred EEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCch-hHHHHHHCCCEEEEEccCCCCCC-Chhhh
Q 006375 377 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRGGGEL-GRQWY 454 (648)
Q Consensus 377 ~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~~~rG~g~~-g~~~~ 454 (648)
.+.++.+.||.+|...++-.+.. ...+..-+|++.-|..|. |.. .+..=++.||.|+..|.+|-+|. |-.
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n-~~~ngq~LvIC~EGNAGF-----YEvG~m~tP~~lgYsvLGwNhPGFagSTG~P-- 286 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPN-QSGNGQDLVICFEGNAGF-----YEVGVMNTPAQLGYSVLGWNHPGFAGSTGLP-- 286 (517)
T ss_pred eEEEEeecCCcchhheeecCCCC-CCCCCceEEEEecCCccc-----eEeeeecChHHhCceeeccCCCCccccCCCC--
Confidence 67889999999998876655433 222224577777774331 111 12233567999999999985543 332
Q ss_pred hcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccc
Q 006375 455 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT 525 (648)
Q Consensus 455 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~ 525 (648)
...|+..-+.++++|.+..-...++.|.++|+|.||+-++++|..+|| ++|+|+.+-|-|++..
T Consensus 287 ------~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDllpL 350 (517)
T KOG1553|consen 287 ------YPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDLLPL 350 (517)
T ss_pred ------CcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhhhhH
Confidence 234666778889999887755678999999999999999999999997 8999999998886643
No 183
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=98.22 E-value=4.6e-05 Score=75.38 Aligned_cols=194 Identities=17% Similarity=0.088 Sum_probs=110.3
Q ss_pred CCCceEEEeccccc-----CCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec---cccCccceeEE
Q 006375 62 APPEHLILDENVKA-----EGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVGVTASVEW 133 (648)
Q Consensus 62 ~~~~~~lld~n~~~-----~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~---~~~~~~~~~~W 133 (648)
.++...|.+.+... ++|+ .++...+|.|+|++|+=++- ..+.++||+.+++.+.. ...++ .+++|
T Consensus 239 ~Dgtvklw~~~~e~~l~~l~gH~-~RVs~VafHPsG~~L~Tasf-----D~tWRlWD~~tk~ElL~QEGHs~~v-~~iaf 311 (459)
T KOG0272|consen 239 ADGTVKLWKLSQETPLQDLEGHL-ARVSRVAFHPSGKFLGTASF-----DSTWRLWDLETKSELLLQEGHSKGV-FSIAF 311 (459)
T ss_pred cCCceeeeccCCCcchhhhhcch-hhheeeeecCCCceeeeccc-----ccchhhcccccchhhHhhccccccc-ceeEe
Confidence 34556666665532 2343 78899999999999986543 45789999999886632 22333 45999
Q ss_pred ecCCeEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCcee
Q 006375 134 AGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR 213 (648)
Q Consensus 134 spDg~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~ 213 (648)
.|||.++-+..-+. .. ..+|+.++ .-.+++.++ -.-.+++.|||+|-.|+ +.+..+..+ ++||......-
T Consensus 312 ~~DGSL~~tGGlD~--~~--RvWDlRtg--r~im~L~gH-~k~I~~V~fsPNGy~lA-Tgs~Dnt~k--VWDLR~r~~ly 381 (459)
T KOG0272|consen 312 QPDGSLAATGGLDS--LG--RVWDLRTG--RCIMFLAGH-IKEILSVAFSPNGYHLA-TGSSDNTCK--VWDLRMRSELY 381 (459)
T ss_pred cCCCceeeccCccc--hh--heeecccC--cEEEEeccc-ccceeeEeECCCceEEe-ecCCCCcEE--Eeeecccccce
Confidence 99998876654221 12 24567777 445666554 33455899999997665 333333344 44555443112
Q ss_pred Eeeecccc-eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCC
Q 006375 214 VLTPRVVG-VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID 278 (648)
Q Consensus 214 ~l~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (648)
.+.....- ...-++|+++.++.+...+. ..+|+... +....+.+..|... +.+++...|
T Consensus 382 ~ipAH~nlVS~Vk~~p~~g~fL~TasyD~--t~kiWs~~--~~~~~ksLaGHe~k--V~s~Dis~d 441 (459)
T KOG0272|consen 382 TIPAHSNLVSQVKYSPQEGYFLVTASYDN--TVKIWSTR--TWSPLKSLAGHEGK--VISLDISPD 441 (459)
T ss_pred ecccccchhhheEecccCCeEEEEcccCc--ceeeecCC--CcccchhhcCCccc--eEEEEeccC
Confidence 22212111 12347887776666655532 34555422 22222224445444 445555444
No 184
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.21 E-value=9.5e-05 Score=76.12 Aligned_cols=101 Identities=21% Similarity=0.234 Sum_probs=65.0
Q ss_pred CCCcEEEE----ecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHc
Q 006375 404 GSDPLLLY----GYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN 479 (648)
Q Consensus 404 ~~~P~vl~----~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 479 (648)
.|.|.||. +|| +|...-.. ..+.-..+..|.-|..+-+.-..+- ..++.|+..+....+++
T Consensus 67 ~krP~vViDPRAGHG-pGIGGFK~-dSevG~AL~~GHPvYFV~F~p~P~p-------------gQTl~DV~~ae~~Fv~~ 131 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHG-PGIGGFKP-DSEVGVALRAGHPVYFVGFFPEPEP-------------GQTLEDVMRAEAAFVEE 131 (581)
T ss_pred CCCCeEEeCCCCCCC-CCccCCCc-ccHHHHHHHcCCCeEEEEecCCCCC-------------CCcHHHHHHHHHHHHHH
Confidence 45777775 566 33333222 3334445567998888877633332 24667877665544332
Q ss_pred ---CCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEE-ecCCc
Q 006375 480 ---CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV-AAVPF 519 (648)
Q Consensus 480 ---~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v-~~~~~ 519 (648)
-.-+..|..++|.+.||.+++.+++.+|+++.-+| +.+|+
T Consensus 132 V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPl 175 (581)
T PF11339_consen 132 VAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPL 175 (581)
T ss_pred HHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCc
Confidence 11233499999999999999999999999988554 55554
No 185
>PTZ00421 coronin; Provisional
Probab=98.19 E-value=0.00055 Score=73.58 Aligned_cols=199 Identities=9% Similarity=0.005 Sum_probs=110.6
Q ss_pred EEeeEEeCC-CCCEEEEEEeCCCCeEEEEEEEECCCCCee------ecccc---CccceeEEecCC-eEEEEEeCCCCCC
Q 006375 82 SVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTPV------GKPLV---GVTASVEWAGNE-ALVYITMDEILRP 150 (648)
Q Consensus 82 ~~~~~~~SP-DG~~la~~~~~~G~e~~~l~v~dl~~g~~~------~~~~~---~~~~~~~WspDg-~l~y~~~~~~~~~ 150 (648)
.+..+.||| |+++||-... + .+|.+||+.++... ...+. .....++|+|++ .++.+... .
T Consensus 77 ~V~~v~fsP~d~~~LaSgS~-D----gtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~----D 147 (493)
T PTZ00421 77 PIIDVAFNPFDPQKLFTASE-D----GTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGA----D 147 (493)
T ss_pred CEEEEEEcCCCCCEEEEEeC-C----CEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeC----C
Confidence 577889999 8888775543 3 37999999765321 01122 124459999997 66666542 2
Q ss_pred ceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc--eeeeEee
Q 006375 151 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASH 228 (648)
Q Consensus 151 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~--~~~~~s~ 228 (648)
..|.++++.++ +....+... ......+.|+|||+.|+..+. +..|.++|+.+++....+...... ....|.+
T Consensus 148 gtVrIWDl~tg--~~~~~l~~h-~~~V~sla~spdG~lLatgs~---Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~ 221 (493)
T PTZ00421 148 MVVNVWDVERG--KAVEVIKCH-SDQITSLEWNLDGSLLCTTSK---DKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAK 221 (493)
T ss_pred CEEEEEECCCC--eEEEEEcCC-CCceEEEEEECCCCEEEEecC---CCEEEEEECCCCcEEEEEecCCCCcceEEEEcC
Confidence 34888888876 233333322 233557899999998765432 456889999887622223222221 2345778
Q ss_pred cCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCC--CcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 229 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE--SVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 229 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
+++.|+..... ...+..|...|+.............. ...+..++.+++.+++....+ ..+++|++.
T Consensus 222 ~~~~ivt~G~s-~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgD--g~Iriwdl~ 290 (493)
T PTZ00421 222 RKDLIITLGCS-KSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGE--GNIRCFELM 290 (493)
T ss_pred CCCeEEEEecC-CCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCC--CeEEEEEee
Confidence 77765544322 22345788888865332211221111 111222333444444443323 457777776
No 186
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.19 E-value=6.6e-05 Score=66.27 Aligned_cols=123 Identities=17% Similarity=0.245 Sum_probs=85.1
Q ss_pred cCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCccccc
Q 006375 460 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE 539 (648)
Q Consensus 460 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~ 539 (648)
.+....++|-++.++.-+..- ++.+.+++||.|+.+++..+.+....++++.+.+|+ |.-+...
T Consensus 37 ~w~~P~~~dWi~~l~~~v~a~---~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVApp-d~~~~~~------------ 100 (181)
T COG3545 37 DWEAPVLDDWIARLEKEVNAA---EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPP-DVSRPEI------------ 100 (181)
T ss_pred CCCCCCHHHHHHHHHHHHhcc---CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCC-Ccccccc------------
Confidence 455567889888888766542 466999999999999999988876678999998885 3322110
Q ss_pred ccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCC
Q 006375 540 EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS 617 (648)
Q Consensus 540 ~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~ 617 (648)
.+ ..+..++|+... +.-.| .+++++.+|+.|+++++..+.+++-.. ++..- .+||.+..
T Consensus 101 ------~~---~~~~tf~~~p~~-~lpfp-s~vvaSrnDp~~~~~~a~~~a~~wgs~-----lv~~g---~~GHiN~~ 159 (181)
T COG3545 101 ------RP---KHLMTFDPIPRE-PLPFP-SVVVASRNDPYVSYEHAEDLANAWGSA-----LVDVG---EGGHINAE 159 (181)
T ss_pred ------ch---hhccccCCCccc-cCCCc-eeEEEecCCCCCCHHHHHHHHHhccHh-----heecc---cccccchh
Confidence 00 112345555433 33556 999999999999999999998887543 33332 67886543
No 187
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.19 E-value=0.0016 Score=66.16 Aligned_cols=239 Identities=13% Similarity=0.113 Sum_probs=115.8
Q ss_pred EeCCCCCEEEEEEe-----CCCCeEEEEEEEECCCCCeeec-cccC--------ccceeEEecCCeEEEEEeCCCCCCce
Q 006375 87 QVSPDNKLVAYAED-----TKGDEIYTVYVIDIETGTPVGK-PLVG--------VTASVEWAGNEALVYITMDEILRPDK 152 (648)
Q Consensus 87 ~~SPDG~~la~~~~-----~~G~e~~~l~v~dl~~g~~~~~-~~~~--------~~~~~~WspDg~l~y~~~~~~~~~~~ 152 (648)
.+||||+.|..... ..|.+.-.|-|+|+++++.+.. .++. ....++.||||+.+|+.. ......
T Consensus 52 ~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n--~~p~~~ 129 (352)
T TIGR02658 52 VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQ--FSPSPA 129 (352)
T ss_pred eECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEec--CCCCCE
Confidence 49999999877755 1233345899999999987742 2211 123589999994444432 111345
Q ss_pred EEEEECCCCCCCcEEEEeecCCCeEEE------EEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc---cee
Q 006375 153 AWLHKLEADQSNDICLYHEKDDIYSLG------LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV---GVD 223 (648)
Q Consensus 153 l~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~---~~~ 223 (648)
|-.+|+.++. -......++....+- .....||+.+.+.....+... .. ...+..... ...
T Consensus 130 V~VvD~~~~k--vv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~--~~-------~~~vf~~~~~~v~~r 198 (352)
T TIGR02658 130 VGVVDLEGKA--FVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPK--IK-------PTEVFHPEDEYLINH 198 (352)
T ss_pred EEEEECCCCc--EEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceE--Ee-------eeeeecCCccccccC
Confidence 7788887652 111111121111100 012344444444333222211 00 111111100 011
Q ss_pred eeEee-cCCEEEEEeccCCCCCcEEEEEeCCCCCc---cee-EecCCC---Ccc-----cceEEEeCCEEEEEEec----
Q 006375 224 TAASH-RGNHFFITRRSDELFNSELLACPVDNTSE---TTV-LIPHRE---SVK-----LQDIQLFIDHLAVYERE---- 286 (648)
Q Consensus 224 ~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~~~~~~---~~~-~~~~~~---~~~-----~~~~~~~~~~l~~~~~~---- 286 (648)
..+++ || ..+|.++. ..|+.+|+.+.+. ..| +++..+ +.. ...+..+++++++....
T Consensus 199 P~~~~~dg-~~~~vs~e-----G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~ 272 (352)
T TIGR02658 199 PAYSNKSG-RLVWPTYT-----GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKW 272 (352)
T ss_pred CceEcCCC-cEEEEecC-----CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccc
Confidence 12356 55 46677665 4799999754221 223 322111 112 22333345566664421
Q ss_pred ---CCeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 287 ---GGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 287 ---~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
++..++++++..+ ++.+ ..+..... ..++..++|+.-++|..+. ....+..+|..+++
T Consensus 273 thk~~~~~V~ViD~~t-~kvi------~~i~vG~~---~~~iavS~Dgkp~lyvtn~--~s~~VsViD~~t~k 333 (352)
T TIGR02658 273 THKTASRFLFVVDAKT-GKRL------RKIELGHE---IDSINVSQDAKPLLYALST--GDKTLYIFDAETGK 333 (352)
T ss_pred cccCCCCEEEEEECCC-CeEE------EEEeCCCc---eeeEEECCCCCeEEEEeCC--CCCcEEEEECcCCe
Confidence 2235889988764 2222 23333222 2234556777734444332 24558899998887
No 188
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.18 E-value=0.00056 Score=70.37 Aligned_cols=201 Identities=12% Similarity=0.154 Sum_probs=101.3
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCC-CCee--eccccC--ccceeEEecCCeEEEEEeCCCCCCceEEEEEC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-GTPV--GKPLVG--VTASVEWAGNEALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~-g~~~--~~~~~~--~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l 158 (648)
..+.++|||++|..+.... ..|.++++++ |... ...+.+ ....++++|||+.+|+.. .....|+.+++
T Consensus 83 ~~i~~~~~g~~l~v~~~~~----~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~---~~~~~v~v~d~ 155 (330)
T PRK11028 83 THISTDHQGRFLFSASYNA----NCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPC---LKEDRIRLFTL 155 (330)
T ss_pred eEEEECCCCCEEEEEEcCC----CeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEee---CCCCEEEEEEE
Confidence 4688999999876664433 3678888864 3221 111222 123478999994445443 22345888888
Q ss_pred CCCCCCc---EEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECC--CCCceeEeee-----c-ccc----ee
Q 006375 159 EADQSND---ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS--KPEELRVLTP-----R-VVG----VD 223 (648)
Q Consensus 159 ~~~~~~~---~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~--~~~~~~~l~~-----~-~~~----~~ 223 (648)
.+...-. ...........-..+.++|||+++++... ..+.|.+++++ +++ .+.+.. . ..+ ..
T Consensus 156 ~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~--~~~~v~v~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~ 232 (330)
T PRK11028 156 SDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNE--LNSSVDVWQLKDPHGE-IECVQTLDMMPADFSDTRWAAD 232 (330)
T ss_pred CCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEec--CCCEEEEEEEeCCCCC-EEEEEEEecCCCcCCCCcccee
Confidence 6531100 00011000111124578999999987533 34666666665 333 322211 1 011 12
Q ss_pred eeEeecCCEEEEEeccCCCCCcEEEEEeCCCCC-ccee--EecCCCCcccceEEE--eCCEEEEEEecCCeeEEEEEEcC
Q 006375 224 TAASHRGNHFFITRRSDELFNSELLACPVDNTS-ETTV--LIPHRESVKLQDIQL--FIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 224 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
..++|+|++||.. ++. . ..|.+++++..+ ..+. .++... ....+.+ +++++++... +...+.++.++
T Consensus 233 i~~~pdg~~lyv~-~~~-~--~~I~v~~i~~~~~~~~~~~~~~~~~--~p~~~~~~~dg~~l~va~~--~~~~v~v~~~~ 304 (330)
T PRK11028 233 IHITPDGRHLYAC-DRT-A--SLISVFSVSEDGSVLSFEGHQPTET--QPRGFNIDHSGKYLIAAGQ--KSHHISVYEID 304 (330)
T ss_pred EEECCCCCEEEEe-cCC-C--CeEEEEEEeCCCCeEEEeEEEeccc--cCCceEECCCCCEEEEEEc--cCCcEEEEEEc
Confidence 4578999977664 542 2 245555553212 1121 222111 2334444 4556665543 33567777776
Q ss_pred CCCC
Q 006375 299 AVGE 302 (648)
Q Consensus 299 ~~g~ 302 (648)
...+
T Consensus 305 ~~~g 308 (330)
T PRK11028 305 GETG 308 (330)
T ss_pred CCCC
Confidence 4333
No 189
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=98.17 E-value=0.00025 Score=75.29 Aligned_cols=197 Identities=15% Similarity=0.118 Sum_probs=122.2
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cc-cCccceeEEecCC-eEEEEEeCCCCCCceEEEE
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~ 156 (648)
+.++..+..||||++||=. .|...|.|||..+|-=..+ +- ......+.|+.+| .++-.+.|.. |..+
T Consensus 350 ~~~i~~l~YSpDgq~iaTG-----~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGt-----VRAw 419 (893)
T KOG0291|consen 350 SDRITSLAYSPDGQLIATG-----AEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGT-----VRAW 419 (893)
T ss_pred ccceeeEEECCCCcEEEec-----cCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCe-----EEee
Confidence 6788999999999999854 4455899999988764332 11 1224569999999 5555554433 5666
Q ss_pred ECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccccee-eeEeecCCEEEE
Q 006375 157 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFI 235 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~ 235 (648)
|+... .--..|+.+.+.-+.-++..|.|.-+. +...+.-+|++++.++|+.+..|..++..+. ..++|+|..|+-
T Consensus 420 DlkRY--rNfRTft~P~p~QfscvavD~sGelV~--AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS 495 (893)
T KOG0291|consen 420 DLKRY--RNFRTFTSPEPIQFSCVAVDPSGELVC--AGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLAS 495 (893)
T ss_pred eeccc--ceeeeecCCCceeeeEEEEcCCCCEEE--eeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEe
Confidence 66544 233455556565555667777786544 4666778999999999983333444444333 469999998776
Q ss_pred EeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 236 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 236 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
.+.+. ..+++-+=-+....+ .++...++.-..|.++++.+.+...+ .+|.+++..
T Consensus 496 ~SWDk---TVRiW~if~s~~~vE--tl~i~sdvl~vsfrPdG~elaVaTld---gqItf~d~~ 550 (893)
T KOG0291|consen 496 GSWDK---TVRIWDIFSSSGTVE--TLEIRSDVLAVSFRPDGKELAVATLD---GQITFFDIK 550 (893)
T ss_pred ccccc---eEEEEEeeccCceee--eEeeccceeEEEEcCCCCeEEEEEec---ceEEEEEhh
Confidence 66641 234433222221122 23333344455677778888777665 256666654
No 190
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.17 E-value=9.6e-05 Score=67.78 Aligned_cols=126 Identities=19% Similarity=0.228 Sum_probs=82.5
Q ss_pred cHhH-HHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhh---------CCCceeEEEecCCcccccccccCCCCCCC
Q 006375 465 TFTD-FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM---------RPDLFKAAVAAVPFVDVLTTMLDPTIPLT 534 (648)
Q Consensus 465 ~~~D-~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~---------~p~~~~a~v~~~~~~d~~~~~~~~~~~~~ 534 (648)
.++. +....+|+.++|.-| +|.|+|.|+.|++.+++. .| .|+-+|..+|+.-.
T Consensus 87 ~~eesl~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~~~------------ 149 (230)
T KOG2551|consen 87 GFEESLEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFKFP------------ 149 (230)
T ss_pred ChHHHHHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCCCC------------
Confidence 4444 556667788888765 799999999999988882 12 35667777665321
Q ss_pred cccccccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCcc
Q 006375 535 TAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 614 (648)
Q Consensus 535 ~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~ 614 (648)
+.+.+.. .....+++| .|-+.|+.|..||...+..+++....+ .++.. .+||+
T Consensus 150 -------~~~~~~~-----------~~~~~i~~P-SLHi~G~~D~iv~~~~s~~L~~~~~~a-----~vl~H---pggH~ 202 (230)
T KOG2551|consen 150 -------SKKLDES-----------AYKRPLSTP-SLHIFGETDTIVPSERSEQLAESFKDA-----TVLEH---PGGHI 202 (230)
T ss_pred -------cchhhhh-----------hhccCCCCC-eeEEecccceeecchHHHHHHHhcCCC-----eEEec---CCCcc
Confidence 0000111 113356788 999999999999999999999888754 23333 57998
Q ss_pred CCCchHHHHHHHHHHHHHHHHhcC
Q 006375 615 SKSGRFERLREAAFTYTFLMRALS 638 (648)
Q Consensus 615 ~~~~~~~~~~~~~~~~~fl~~~l~ 638 (648)
..... ...+. +.+|+...+.
T Consensus 203 VP~~~-~~~~~---i~~fi~~~~~ 222 (230)
T KOG2551|consen 203 VPNKA-KYKEK---IADFIQSFLQ 222 (230)
T ss_pred CCCch-HHHHH---HHHHHHHHHH
Confidence 76654 33333 3566655443
No 191
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.16 E-value=1.6e-05 Score=80.17 Aligned_cols=238 Identities=18% Similarity=0.177 Sum_probs=118.5
Q ss_pred eEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcH
Q 006375 387 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 466 (648)
Q Consensus 387 ~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~ 466 (648)
..+.+.+..|++. ...++.|+++..||........ ......++..++.++..+....++.+-.-+ |. .......
T Consensus 31 ~~~~~~l~~p~~~-~~~~~~p~v~~~h~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--g~-~~~~~~~ 104 (299)
T COG1073 31 IALAAVLHLPPSG-NEEKKLPAVVFLHGFGSSKEQS--LGYAVLLAEKGYRVLAGDASLFGESGGDPR--GL-ADSEGYA 104 (299)
T ss_pred ceeeeEEEecCCC-CccccCceEEeccCccccccCc--chHHHHhhhceeEEeeeccccccccccccc--cc-cCccccc
Confidence 5577787888765 3336799999999954433221 124667778888877776411111111100 00 0000000
Q ss_pred hHHHHHHHHHHH---------cCCCCCCeEEEEeeChhHHHHHHHHhhCCC---ceeEEEecCCccccccccc-------
Q 006375 467 TDFIACAEYLIK---------NCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVDVLTTML------- 527 (648)
Q Consensus 467 ~D~~~~~~~l~~---------~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~~~a~v~~~~~~d~~~~~~------- 527 (648)
.++......... ......++....|.+.||..+..++...+. ..+.++...+.-.......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~ 184 (299)
T COG1073 105 EDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPEL 184 (299)
T ss_pred cccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHH
Confidence 111111111000 011123677778888887777776666542 2222222211110000000
Q ss_pred -CCCCCC--Cccccccc-CCC-----CCHHHHHHHHcCCccccCCCCC-CCeEEEeecCCCCccCCchHHHHHHHHHhcC
Q 006375 528 -DPTIPL--TTAEWEEW-GDP-----WKEEFYFYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLREMK 597 (648)
Q Consensus 528 -~~~~~~--~~~~~~~~-g~~-----~~~~~~~~~~~~sp~~~~~~~~-~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~ 597 (648)
....+. ....+... ..+ .... ...+..+++...+.++. .| +|++||.+|..||..++.+++.+.+..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~i~~~P-~l~~~G~~D~~vp~~~~~~~~~~~~~~- 261 (299)
T COG1073 185 ARELIDYLITPGGFAPLPAPEAPLDTLPLR-AVLLLLLDPFDDAEKISPRP-VLLVHGERDEVVPLRDAEDLYEAARER- 261 (299)
T ss_pred HHhhhhhhccCCCCCCCCcccccccccccc-hhhhccCcchhhHhhcCCcc-eEEEecCCCcccchhhhHHHHhhhccC-
Confidence 000000 00000000 000 0011 12245566777777775 67 999999999999999999999998865
Q ss_pred CCCCeEEEEecCCCCccCCC-chHHHHHHHHHHHHHHHHhc
Q 006375 598 TDDNILLFKCELGAGHFSKS-GRFERLREAAFTYTFLMRAL 637 (648)
Q Consensus 598 ~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~~fl~~~l 637 (648)
+.+.++++ +++|.... ......+...++..||.++|
T Consensus 262 -~~~~~~~~---~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 262 -PKKLLFVP---GGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred -CceEEEec---CCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 44444554 66796653 22221233446678988875
No 192
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.15 E-value=4.1e-06 Score=79.90 Aligned_cols=171 Identities=18% Similarity=0.171 Sum_probs=77.9
Q ss_pred CCcEEEEecCCCCCCCCCCCchhH---HHHHHC-CCEEEEEccCCCC--------------------CCChhhhhccccc
Q 006375 405 SDPLLLYGYGSYEICNDPAFNSSR---LSLLDR-GFIFAIAQIRGGG--------------------ELGRQWYENGKFL 460 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~~~~~~~~~---~~l~~~-G~~v~~~~~rG~g--------------------~~g~~~~~~~~~~ 460 (648)
+.+-||++||...+. .-|.... ...+.. ++.++.+|-+--- +....|......
T Consensus 3 ~k~riLcLHG~~~na--~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~- 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNA--EIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD- 79 (212)
T ss_dssp ---EEEEE--TT--H--HHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S--
T ss_pred CCceEEEeCCCCcCH--HHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC-
Confidence 357899999954332 1233222 233334 7888888753111 122233322111
Q ss_pred CCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhC--------CCceeEEEecCCcccccccccCCCCC
Q 006375 461 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR--------PDLFKAAVAAVPFVDVLTTMLDPTIP 532 (648)
Q Consensus 461 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~--------p~~~~a~v~~~~~~d~~~~~~~~~~~ 532 (648)
.....++..++++|.+.-.-+.--.+|+|+|.||.+|+.++.+. ...|+.+|+.+++.-....
T Consensus 80 --~~~~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------- 150 (212)
T PF03959_consen 80 --DHEYEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------- 150 (212)
T ss_dssp --SGGG---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE--------
T ss_pred --cccccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-------
Confidence 23355566666665442100112479999999999998777531 1247888888876432110
Q ss_pred CCcccccccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCC
Q 006375 533 LTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAG 612 (648)
Q Consensus 533 ~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g 612 (648)
+.+...-.++++| +|-++|.+|..+++..++++++..... . .++.. .+|
T Consensus 151 -----------------------~~~~~~~~~i~iP-tlHv~G~~D~~~~~~~s~~L~~~~~~~---~--~v~~h--~gG 199 (212)
T PF03959_consen 151 -----------------------YQELYDEPKISIP-TLHVIGENDPVVPPERSEALAEMFDPD---A--RVIEH--DGG 199 (212)
T ss_dssp -----------------------GTTTT--TT---E-EEEEEETT-SSS-HHHHHHHHHHHHHH---E--EEEEE--SSS
T ss_pred -----------------------hhhhhccccCCCC-eEEEEeCCCCCcchHHHHHHHHhccCC---c--EEEEE--CCC
Confidence 0010012344677 999999999999999999999888764 1 23332 678
Q ss_pred ccCCCc
Q 006375 613 HFSKSG 618 (648)
Q Consensus 613 H~~~~~ 618 (648)
|.....
T Consensus 200 H~vP~~ 205 (212)
T PF03959_consen 200 HHVPRK 205 (212)
T ss_dssp SS----
T ss_pred CcCcCC
Confidence 976543
No 193
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=98.11 E-value=0.00039 Score=70.86 Aligned_cols=194 Identities=17% Similarity=0.249 Sum_probs=112.0
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-----cccCccceeEEecCC-eEEEEEeCCCCCCceEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-----PLVGVTASVEWAGNE-ALVYITMDEILRPDKAW 154 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-----~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~ 154 (648)
-.+...++||||.+.|=+.. .-.++++|=++|+.+-. .-.+....++||||+ +|+-.+.+ ...+||
T Consensus 191 kFV~~VRysPDG~~Fat~gs-----Dgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaD---kt~KIW 262 (603)
T KOG0318|consen 191 KFVNCVRYSPDGSRFATAGS-----DGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSAD---KTIKIW 262 (603)
T ss_pred cceeeEEECCCCCeEEEecC-----CccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCC---ceEEEE
Confidence 35678999999999875532 23799999999987732 112223459999999 87655443 334444
Q ss_pred EEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccccee-eeEeecCCEE
Q 006375 155 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHF 233 (648)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l 233 (648)
++.+..-..+......-....++.-|..| .|+-.+.+ + -|-.++.+....++.+......+. ..+++||++|
T Consensus 263 --dVs~~slv~t~~~~~~v~dqqvG~lWqkd--~lItVSl~-G--~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i 335 (603)
T KOG0318|consen 263 --DVSTNSLVSTWPMGSTVEDQQVGCLWQKD--HLITVSLS-G--TINYLNPSDPSVLKVISGHNKSITALTVSPDGKTI 335 (603)
T ss_pred --EeeccceEEEeecCCchhceEEEEEEeCC--eEEEEEcC-c--EEEEecccCCChhheecccccceeEEEEcCCCCEE
Confidence 44444222222332222345667788844 23322222 2 344556665553444555544544 4689999877
Q ss_pred EEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeC-CEEEEEEecCCeeEEEEEEcC
Q 006375 234 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 234 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~l~v~~~~ 298 (648)
|-.+.+ ++|...+...+...+ +++.....++..+.... +.++-...++ .|++.++.
T Consensus 336 ~SgsyD-----G~I~~W~~~~g~~~~-~~g~~h~nqI~~~~~~~~~~~~t~g~Dd---~l~~~~~~ 392 (603)
T KOG0318|consen 336 YSGSYD-----GHINSWDSGSGTSDR-LAGKGHTNQIKGMAASESGELFTIGWDD---TLRVISLK 392 (603)
T ss_pred EeeccC-----ceEEEEecCCccccc-cccccccceEEEEeecCCCcEEEEecCC---eEEEEecc
Confidence 544332 578888876532222 55444455677777766 5555555554 45555553
No 194
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.10 E-value=0.00086 Score=68.05 Aligned_cols=193 Identities=13% Similarity=0.142 Sum_probs=101.8
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEE--------ecCCeEEEEEeCCCCCCceEEE
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEW--------AGNEALVYITMDEILRPDKAWL 155 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~W--------spDg~l~y~~~~~~~~~~~l~~ 155 (648)
.+.+|||||+|.+. +.+. ...+-|+|+++++.+.. ..++...-+.+ ..||.++..+.+..+. +..
T Consensus 109 ~~~ls~dgk~l~V~-n~~p--~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~---~~~ 182 (352)
T TIGR02658 109 MTSLTPDNKTLLFY-QFSP--SPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGN---PKI 182 (352)
T ss_pred eEEECCCCCEEEEe-cCCC--CCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCc---eEE
Confidence 78899999987654 3222 34799999999997742 33433222333 4555333333322221 111
Q ss_pred EECCCCCCCcEEEEee-cCCCeEEEEEeCC-CCcEEEEEEccccccEEEEEECCCCC-----ceeEeeec-------ccc
Q 006375 156 HKLEADQSNDICLYHE-KDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPE-----ELRVLTPR-------VVG 221 (648)
Q Consensus 156 ~~l~~~~~~~~~~~~~-~~~~~~~~~~~s~-Dg~~l~~~~~~~~~~~l~~~dl~~~~-----~~~~l~~~-------~~~ 221 (648)
....+|.. .++.+ ..+.+++ ||++++++.. ..|+.+|+.+.+ .+..++.. ..+
T Consensus 183 --------~~~~vf~~~~~~v~-~rP~~~~~dg~~~~vs~e----G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g 249 (352)
T TIGR02658 183 --------KPTEVFHPEDEYLI-NHPAYSNKSGRLVWPTYT----GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGG 249 (352)
T ss_pred --------eeeeeecCCccccc-cCCceEcCCCcEEEEecC----CeEEEEecCCCcceecceeeeccccccccccCCCc
Confidence 11122221 11111 1222345 8988877544 789999976654 12222211 111
Q ss_pred ee-eeEeecCCEEEEEeccCC-----CCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEE-EEEEecCCeeEEEE
Q 006375 222 VD-TAASHRGNHFFITRRSDE-----LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHL-AVYEREGGLQKITT 294 (648)
Q Consensus 222 ~~-~~~s~dg~~l~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~l~v 294 (648)
.+ ..++++|+.+|+..+... .+..+|.++|..+..... .++-.. ...++.+++|.- .++..+.....+.+
T Consensus 250 ~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~-~i~vG~--~~~~iavS~Dgkp~lyvtn~~s~~VsV 326 (352)
T TIGR02658 250 WQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLR-KIELGH--EIDSINVSQDAKPLLYALSTGDKTLYI 326 (352)
T ss_pred ceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEE-EEeCCC--ceeeEEECCCCCeEEEEeCCCCCcEEE
Confidence 11 458899999998654311 122489999987633222 333322 245566666533 34444444556888
Q ss_pred EEcCC
Q 006375 295 YRLPA 299 (648)
Q Consensus 295 ~~~~~ 299 (648)
++...
T Consensus 327 iD~~t 331 (352)
T TIGR02658 327 FDAET 331 (352)
T ss_pred EECcC
Confidence 88763
No 195
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.09 E-value=0.00098 Score=71.56 Aligned_cols=153 Identities=16% Similarity=0.162 Sum_probs=97.4
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCC-CCeeeccccC---ccceeEEecCCeEEEEEeCCCCCCceEEE
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-GTPVGKPLVG---VTASVEWAGNEALVYITMDEILRPDKAWL 155 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~-g~~~~~~~~~---~~~~~~WspDg~l~y~~~~~~~~~~~l~~ 155 (648)
...+..+.|||||++|+=.. ...+|+|||+.. +..+. ++.+ ....++|+|+|.++.....+ ..|++
T Consensus 203 ~~~v~~~~fs~d~~~l~s~s-----~D~tiriwd~~~~~~~~~-~l~gH~~~v~~~~f~p~g~~i~Sgs~D----~tvri 272 (456)
T KOG0266|consen 203 TRGVSDVAFSPDGSYLLSGS-----DDKTLRIWDLKDDGRNLK-TLKGHSTYVTSVAFSPDGNLLVSGSDD----GTVRI 272 (456)
T ss_pred ccceeeeEECCCCcEEEEec-----CCceEEEeeccCCCeEEE-EecCCCCceEEEEecCCCCEEEEecCC----CcEEE
Confidence 56788999999999766443 356999999944 34432 2222 24569999999444544322 23778
Q ss_pred EECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCcee---Eeeecccc---eeeeEeec
Q 006375 156 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR---VLTPRVVG---VDTAASHR 229 (648)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~---~l~~~~~~---~~~~~s~d 229 (648)
+++.++ +-...+..+.. ....+.+++||++|+.. + .+..|.++|+.++. .+ .+...... ....++|+
T Consensus 273 Wd~~~~--~~~~~l~~hs~-~is~~~f~~d~~~l~s~--s-~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~fsp~ 345 (456)
T KOG0266|consen 273 WDVRTG--ECVRKLKGHSD-GISGLAFSPDGNLLVSA--S-YDGTIRVWDLETGS-KLCLKLLSGAENSAPVTSVQFSPN 345 (456)
T ss_pred EeccCC--eEEEeeeccCC-ceEEEEECCCCCEEEEc--C-CCccEEEEECCCCc-eeeeecccCCCCCCceeEEEECCC
Confidence 888875 34445544433 34467899999998754 2 26788999999886 32 23322222 22358999
Q ss_pred CCEEEEEeccCCCCCcEEEEEeCCC
Q 006375 230 GNHFFITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 230 g~~l~~~~~~~~~~~~~l~~~~~~~ 254 (648)
|++|+..+.. ..|...++..
T Consensus 346 ~~~ll~~~~d-----~~~~~w~l~~ 365 (456)
T KOG0266|consen 346 GKYLLSASLD-----RTLKLWDLRS 365 (456)
T ss_pred CcEEEEecCC-----CeEEEEEccC
Confidence 9877655443 3566666654
No 196
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=98.09 E-value=0.0033 Score=67.07 Aligned_cols=239 Identities=11% Similarity=0.084 Sum_probs=140.8
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec---cccCccceeEEecCCeEEEEEeCCCCCCceEEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~---~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~ 157 (648)
..+..+.|+--|.+||+....-| +|-||+..+...+.. ....+ ..++.||||+++.+..+ ..+|..++
T Consensus 308 ~~I~t~~~N~tGDWiA~g~~klg----QLlVweWqsEsYVlKQQgH~~~i-~~l~YSpDgq~iaTG~e----DgKVKvWn 378 (893)
T KOG0291|consen 308 QKILTVSFNSTGDWIAFGCSKLG----QLLVWEWQSESYVLKQQGHSDRI-TSLAYSPDGQLIATGAE----DGKVKVWN 378 (893)
T ss_pred ceeeEEEecccCCEEEEcCCccc----eEEEEEeeccceeeeccccccce-eeEEECCCCcEEEeccC----CCcEEEEe
Confidence 46677888889999999987655 788888877665422 22333 45999999955555543 34577777
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc--eeeeEeecCCEEEE
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFI 235 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~ 235 (648)
..++ -=...|+++... ...+.|+..|+.++-.+-+ ..+..+|+......+.++....- ....++|.|. |++
T Consensus 379 ~~Sg--fC~vTFteHts~-Vt~v~f~~~g~~llssSLD---GtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGe-lV~ 451 (893)
T KOG0291|consen 379 TQSG--FCFVTFTEHTSG-VTAVQFTARGNVLLSSSLD---GTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGE-LVC 451 (893)
T ss_pred ccCc--eEEEEeccCCCc-eEEEEEEecCCEEEEeecC---CeEEeeeecccceeeeecCCCceeeeEEEEcCCCC-EEE
Confidence 7665 234556665443 3367899999888755443 34666777665433444322111 2234667687 444
Q ss_pred EeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccc--eEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCcee
Q 006375 236 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQ--DIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSV 313 (648)
Q Consensus 236 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i 313 (648)
.... ..|.|++.+++++.... ++...++. +. .+.+.++.++-.+.+ ..+++|++=...+. .+++
T Consensus 452 AG~~---d~F~IfvWS~qTGqllD-iLsGHEgP-Vs~l~f~~~~~~LaS~SWD---kTVRiW~if~s~~~------vEtl 517 (893)
T KOG0291|consen 452 AGAQ---DSFEIFVWSVQTGQLLD-ILSGHEGP-VSGLSFSPDGSLLASGSWD---KTVRIWDIFSSSGT------VETL 517 (893)
T ss_pred eecc---ceEEEEEEEeecCeeee-hhcCCCCc-ceeeEEccccCeEEecccc---ceEEEEEeeccCce------eeeE
Confidence 4433 45899999998844333 44444332 44 466666755433333 24566665322221 1344
Q ss_pred ecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 314 EFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 314 ~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
..+.. +..+.+.|++.++.+.... +++-.+|.+.+.
T Consensus 518 ~i~sd---vl~vsfrPdG~elaVaTld----gqItf~d~~~~~ 553 (893)
T KOG0291|consen 518 EIRSD---VLAVSFRPDGKELAVATLD----GQITFFDIKEAV 553 (893)
T ss_pred eeccc---eeEEEEcCCCCeEEEEEec----ceEEEEEhhhce
Confidence 44332 3346677889988765432 456667766543
No 197
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.08 E-value=3.5e-05 Score=75.42 Aligned_cols=118 Identities=19% Similarity=0.254 Sum_probs=82.3
Q ss_pred ceEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCC-----CCchhHHHHHHC-CCEEEEEccCCCCC
Q 006375 375 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-----AFNSSRLSLLDR-GFIFAIAQIRGGGE 448 (648)
Q Consensus 375 ~~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~-----~~~~~~~~l~~~-G~~v~~~~~rG~g~ 448 (648)
..+++.+.. |+..|.+..+.-++. .+...||+.-|..+ ..+. .....+..++.. |..|+++||||-|.
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a----~~~RWiL~s~GNg~-~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~ 184 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEA----KPQRWILVSNGNGE-CYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGS 184 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCC----CCCcEEEEEcCChH-HhhhhhhhccccHHHHHHHHHcCCcEEEECCCcccc
Confidence 467777775 899999887664443 33457777776322 2221 122345566554 99999999999774
Q ss_pred C-ChhhhhcccccCCCCcHhHHHHHHHHHHHcC-CCCCCeEEEEeeChhHHHHHHHHhhC
Q 006375 449 L-GRQWYENGKFLKKKNTFTDFIACAEYLIKNC-YCTKEKLCIEGRSAGGLLIGAVLNMR 506 (648)
Q Consensus 449 ~-g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-~~d~~~i~i~G~S~GG~l~~~~~~~~ 506 (648)
. |. .....-+.|..+|++||.++. .+.+++|.+.|+|.||.+++.++.++
T Consensus 185 S~G~--------~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 185 STGP--------PSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCCC--------CCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 3 22 123456789999999999743 46899999999999999988877654
No 198
>PTZ00420 coronin; Provisional
Probab=98.08 E-value=0.011 Score=64.23 Aligned_cols=201 Identities=9% Similarity=0.039 Sum_probs=108.0
Q ss_pred EeCCCCCEEEEEEeCC-CCeEEEEEEEECCCCCeeec-c-ccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCC
Q 006375 87 QVSPDNKLVAYAEDTK-GDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQ 162 (648)
Q Consensus 87 ~~SPDG~~la~~~~~~-G~e~~~l~v~dl~~g~~~~~-~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~ 162 (648)
.++..++++|+..+.. |+....|.++++.....+.. . -.+....++|+|+. .++++...+ ..|.++++.++.
T Consensus 33 ~ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~D----gtIrIWDi~t~~ 108 (568)
T PTZ00420 33 GIACSSGFVAVPWEVEGGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSED----LTIRVWEIPHND 108 (568)
T ss_pred eEeeCCCeEEEEEEcCCCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCC----CeEEEEECCCCC
Confidence 3566778888887653 44355778888765543321 1 12234569999985 666665432 347777776532
Q ss_pred C------CcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEE
Q 006375 163 S------NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFIT 236 (648)
Q Consensus 163 ~------~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~ 236 (648)
. .....+..+ ......+.|+|++..+++++.. +..|.++|+.+++....+.....-....|+++|..|+..
T Consensus 109 ~~~~~i~~p~~~L~gH-~~~V~sVaf~P~g~~iLaSgS~--DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~ 185 (568)
T PTZ00420 109 ESVKEIKDPQCILKGH-KKKISIIDWNPMNYYIMCSSGF--DSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGT 185 (568)
T ss_pred ccccccccceEEeecC-CCcEEEEEECCCCCeEEEEEeC--CCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEE
Confidence 1 011122222 2234468999999988765443 356888899887622222211111234599999976544
Q ss_pred eccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEE-----EeCCEEEEEEecC-CeeEEEEEEcCC
Q 006375 237 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQ-----LFIDHLAVYEREG-GLQKITTYRLPA 299 (648)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~-~~~~l~v~~~~~ 299 (648)
+.. ..|.++|+.+......+-.+........+. .+++.++.....+ ...++.+|++..
T Consensus 186 s~D-----~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~ 249 (568)
T PTZ00420 186 CVG-----KHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKN 249 (568)
T ss_pred ecC-----CEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCC
Confidence 322 367788887633222122233221111121 2233444333332 224689999874
No 199
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.06 E-value=0.0038 Score=64.77 Aligned_cols=250 Identities=15% Similarity=0.101 Sum_probs=119.3
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-ccc--------CccceeEEecCC-eEEEEEeCCCCCCce
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV--------GVTASVEWAGNE-ALVYITMDEILRPDK 152 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~--------~~~~~~~WspDg-~l~y~~~~~~~~~~~ 152 (648)
..++.+||||++|+.+.-..+ ++.|+|.++.+.+.. ... .....+.-+|++ .+++.-. +..+
T Consensus 80 ~~~i~~s~DG~~~~v~n~~~~----~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lk----d~~~ 151 (369)
T PF02239_consen 80 PRGIAVSPDGKYVYVANYEPG----TVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLK----DTGE 151 (369)
T ss_dssp EEEEEE--TTTEEEEEEEETT----EEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEET----TTTE
T ss_pred cceEEEcCCCCEEEEEecCCC----ceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEc----cCCe
Confidence 357899999999987765555 799999999887632 111 112345567887 5555432 2457
Q ss_pred EEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeec--cc--ceee-eEe
Q 006375 153 AWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR--VV--GVDT-AAS 227 (648)
Q Consensus 153 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~--~~--~~~~-~~s 227 (648)
+|..+.... ....+-...-..+..+..|+|||||++...+. .+.+-++|+++++ ...+... .. +.-. ...
T Consensus 152 I~vVdy~d~--~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~--sn~i~viD~~~~k-~v~~i~~g~~p~~~~~~~~ph 226 (369)
T PF02239_consen 152 IWVVDYSDP--KNLKVTTIKVGRFPHDGGFDPDGRYFLVAANG--SNKIAVIDTKTGK-LVALIDTGKKPHPGPGANFPH 226 (369)
T ss_dssp EEEEETTTS--SCEEEEEEE--TTEEEEEE-TTSSEEEEEEGG--GTEEEEEETTTTE-EEEEEE-SSSBEETTEEEEEE
T ss_pred EEEEEeccc--cccceeeecccccccccccCcccceeeecccc--cceeEEEeeccce-EEEEeeccccccccccccccC
Confidence 999987765 22222222234555678899999999876543 3588889988876 3333221 11 0011 122
Q ss_pred ecCCEEEEEeccCCCCCcEEEEEeCCC-CCccee----EecCCCCcccceEEEeCCEEEEE-EecCCeeEEEEEEcCCCC
Q 006375 228 HRGNHFFITRRSDELFNSELLACPVDN-TSETTV----LIPHRESVKLQDIQLFIDHLAVY-EREGGLQKITTYRLPAVG 301 (648)
Q Consensus 228 ~dg~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~l~v~~~~~~g 301 (648)
|..+.++..... +....-++-.+... -....| .++......-...++.+.++++- ........+.+++..+-
T Consensus 227 p~~g~vw~~~~~-~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl- 304 (369)
T PF02239_consen 227 PGFGPVWATSGL-GYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTL- 304 (369)
T ss_dssp TTTEEEEEEEBS-SSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGT-
T ss_pred CCcceEEeeccc-cceecccccCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCc-
Confidence 333344433332 11110112112111 011122 22222221122234455566655 12233568888887631
Q ss_pred CcccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 302 EPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 302 ~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
... ..+. +.+...+-.+.++.+++.++++.... -.++..||.+|.+
T Consensus 305 ~~~------~~i~-~~~~~~~~h~ef~~dG~~v~vS~~~~--~~~i~v~D~~Tl~ 350 (369)
T PF02239_consen 305 KVV------KTIT-PGPGKRVVHMEFNPDGKEVWVSVWDG--NGAIVVYDAKTLK 350 (369)
T ss_dssp EEE------E-HH-HHHT--EEEEEE-TTSSEEEEEEE----TTEEEEEETTTTE
T ss_pred cee------EEEe-ccCCCcEeccEECCCCCEEEEEEecC--CCEEEEEECCCcE
Confidence 111 1111 00110121245667899888765544 3389999999987
No 200
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=98.06 E-value=0.002 Score=64.49 Aligned_cols=242 Identities=13% Similarity=0.057 Sum_probs=135.0
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEecCCeEEEEEeCCCCCCceEEEEECCCCCCC
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSN 164 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~~~ 164 (648)
+|.|-|+.+.|.|. |..| .+|+-++.++|+......++...+...-.++..+++... .+++.++.++..
T Consensus 29 gP~w~~~~~~L~w~-DI~~---~~i~r~~~~~g~~~~~~~p~~~~~~~~~d~~g~Lv~~~~------g~~~~~~~~~~~- 97 (307)
T COG3386 29 GPVWDPDRGALLWV-DILG---GRIHRLDPETGKKRVFPSPGGFSSGALIDAGGRLIACEH------GVRLLDPDTGGK- 97 (307)
T ss_pred CccCcCCCCEEEEE-eCCC---CeEEEecCCcCceEEEECCCCcccceeecCCCeEEEEcc------ccEEEeccCCce-
Confidence 78999999988665 4444 388999999887766555554444555555533333322 255555544311
Q ss_pred cEEEEeecC---CCeEEEEEeCCCCcEEEEEEcc---------ccccEEEEEECCCCCceeEeeecccc-eeeeEeecCC
Q 006375 165 DICLYHEKD---DIYSLGLQASESKKFLFIASES---------KITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGN 231 (648)
Q Consensus 165 ~~~~~~~~~---~~~~~~~~~s~Dg~~l~~~~~~---------~~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~ 231 (648)
.+++.+..+ ....-+....|||++-+ .... +....||++|..+.. .+++...... .-..|||||+
T Consensus 98 ~t~~~~~~~~~~~~r~ND~~v~pdG~~wf-gt~~~~~~~~~~~~~~G~lyr~~p~g~~-~~l~~~~~~~~NGla~SpDg~ 175 (307)
T COG3386 98 ITLLAEPEDGLPLNRPNDGVVDPDGRIWF-GDMGYFDLGKSEERPTGSLYRVDPDGGV-VRLLDDDLTIPNGLAFSPDGK 175 (307)
T ss_pred eEEeccccCCCCcCCCCceeEcCCCCEEE-eCCCccccCccccCCcceEEEEcCCCCE-EEeecCcEEecCceEECCCCC
Confidence 122222211 11223567789987544 4333 122479999985554 4444332211 1245999999
Q ss_pred EEEEEeccCCCCCcEEEEEeCCC---C--CcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccc
Q 006375 232 HFFITRRSDELFNSELLACPVDN---T--SETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKS 306 (648)
Q Consensus 232 ~l~~~~~~~~~~~~~l~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~ 306 (648)
.+|+.-.. ..+|++++++. . +....+....+.....++..+.++.+......+-..+.+++.+ |..+
T Consensus 176 tly~aDT~----~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd--G~l~-- 247 (307)
T COG3386 176 TLYVADTP----ANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD--GKLL-- 247 (307)
T ss_pred EEEEEeCC----CCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC--CcEE--
Confidence 98887543 35888888752 1 1111222222344577888888876665444333577777776 5543
Q ss_pred cCCCceeecCCCeeeeeCCCCcc---cccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 307 LQGGKSVEFIDPVYSIDPSESVF---SSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 307 l~~~~~i~~~~~~~~v~~~~~~~---~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
..+.+|... + .++.+ +.+.|+++.+....+ ....-+...|.
T Consensus 248 ----~~i~lP~~~--~--t~~~FgG~~~~~L~iTs~~~~~~-~~~~~~~~~G~ 291 (307)
T COG3386 248 ----GEIKLPVKR--P--TNPAFGGPDLNTLYITSARSGMS-RMLTADPLGGG 291 (307)
T ss_pred ----EEEECCCCC--C--ccceEeCCCcCEEEEEecCCCCC-ccccccccCce
Confidence 356666321 1 22333 347777777666555 33334444554
No 201
>PRK10115 protease 2; Provisional
Probab=98.05 E-value=0.0063 Score=68.58 Aligned_cols=247 Identities=9% Similarity=-0.025 Sum_probs=132.6
Q ss_pred eEeCCEEEEEEecCCceEEEEEEEecCCCCCCCCccccCCCCCCCCCceEEEecccccCCCCcEEEeeEEeCCCCCEEEE
Q 006375 18 FRQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAY 97 (648)
Q Consensus 18 ~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~~~~~~~~~SPDG~~la~ 97 (648)
.++|.++.|....+|.+...++.+...+ + ++|.++-.. +. ..+.|+|||+.|.|
T Consensus 135 Spdg~~la~~~d~~G~E~~~l~v~d~~t------------------g-~~l~~~i~~------~~-~~~~w~~D~~~~~y 188 (686)
T PRK10115 135 TPDNTIMALAEDFLSRRQYGIRFRNLET------------------G-NWYPELLDN------VE-PSFVWANDSWTFYY 188 (686)
T ss_pred CCCCCEEEEEecCCCcEEEEEEEEECCC------------------C-CCCCccccC------cc-eEEEEeeCCCEEEE
Confidence 3578888999999999988888877542 1 222221111 11 35899999999999
Q ss_pred EEeCCC-CeEEEEEEEECCCCC--eeec--cccCccceeEEec-CC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEe
Q 006375 98 AEDTKG-DEIYTVYVIDIETGT--PVGK--PLVGVTASVEWAG-NE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYH 170 (648)
Q Consensus 98 ~~~~~G-~e~~~l~v~dl~~g~--~~~~--~~~~~~~~~~Wsp-Dg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 170 (648)
+....+ ....+||..++.++. .... ...+...-..|.+ |+ .+++.... ....++++++......+...+..
T Consensus 189 ~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~--~~~~~~~l~~~~~~~~~~~~~~~ 266 (686)
T PRK10115 189 VRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLAS--ATTSEVLLLDAELADAEPFVFLP 266 (686)
T ss_pred EEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEEC--CccccEEEEECcCCCCCceEEEE
Confidence 987543 234799999999983 2211 1112122234555 77 66644432 22345777664332122333333
Q ss_pred ecCCCeEEEEEeCCCCcEEEEEEccc-cccEEEEEECCCCCceeEeeecccc-eeeeEeecCCEEEEEeccCCCCCcEEE
Q 006375 171 EKDDIYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNSELL 248 (648)
Q Consensus 171 ~~~~~~~~~~~~s~Dg~~l~~~~~~~-~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~ 248 (648)
....... .+. ..+..+++.++.. ....|..+++.+...++.+.+...+ ..-.+...++.|++..+.+ ...+|+
T Consensus 267 ~~~~~~~-~~~--~~~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~--g~~~l~ 341 (686)
T PRK10115 267 RRKDHEY-SLD--HYQHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQR--GLTSLR 341 (686)
T ss_pred CCCCCEE-EEE--eCCCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeC--CEEEEE
Confidence 3222222 222 2235566666543 4578888888742236667665333 2223444477888888863 345788
Q ss_pred EEeCCCCCcceeEe-cCCCCcccceEE--EeCCEEEEEEecC-CeeEEEEEEcC
Q 006375 249 ACPVDNTSETTVLI-PHRESVKLQDIQ--LFIDHLAVYEREG-GLQKITTYRLP 298 (648)
Q Consensus 249 ~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~l~~~~~~~-~~~~l~v~~~~ 298 (648)
.++..+ +....+. +........+.. ...+.+++....- ....++.+++.
T Consensus 342 ~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~ 394 (686)
T PRK10115 342 QINRKT-REVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMD 394 (686)
T ss_pred EEcCCC-CceEEecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECC
Confidence 888754 2222122 211111111111 2234454444433 34577777776
No 202
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.04 E-value=0.00092 Score=68.69 Aligned_cols=222 Identities=13% Similarity=0.120 Sum_probs=130.1
Q ss_pred CceEEEecccccCC-------CCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee---eccccCccceeEE
Q 006375 64 PEHLILDENVKAEG-------RGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV---GKPLVGVTASVEW 133 (648)
Q Consensus 64 ~~~~lld~n~~~~~-------~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~---~~~~~~~~~~~~W 133 (648)
..-++.|..+.... .....-.-++||.|+|++|-..- ..|.|++..+-..+ ...+.++.. ++|
T Consensus 282 ~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~------~sisIyEtpsf~lld~Kslki~gIr~-Fsw 354 (698)
T KOG2314|consen 282 QQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG------NSISIYETPSFMLLDKKSLKISGIRD-FSW 354 (698)
T ss_pred ceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc------ceEEEEecCceeeecccccCCccccC-ccc
Confidence 44567776554321 12233346799999999997753 35667765442222 224566554 999
Q ss_pred ecCC-eEEEEEeCCCCCCceEEEEECCCCCCCc-EEEEeecCCCeEEEEEeCCCCcEEEEEEccccc---------cEEE
Q 006375 134 AGNE-ALVYITMDEILRPDKAWLHKLEADQSND-ICLYHEKDDIYSLGLQASESKKFLFIASESKIT---------RFVF 202 (648)
Q Consensus 134 spDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~---------~~l~ 202 (648)
||-+ -|+|=..-.++.+.++-++.+.+++.-. ..++...| +...|-+.|.||.+...+... -+|+
T Consensus 355 sP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsD----ckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIf 430 (698)
T KOG2314|consen 355 SPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSD----CKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIF 430 (698)
T ss_pred CCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeec----cEEEeccCCcEEEEEEEeeccccccceEeeEEEE
Confidence 9999 7777655446677888888887763211 11232222 245799999999998765322 2455
Q ss_pred EEECCCCCceeEeeecccceeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcc--cceEEEeCCEE
Q 006375 203 YLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVK--LQDIQLFIDHL 280 (648)
Q Consensus 203 ~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 280 (648)
.++-..- +...+.-...-..+.|.|.|+.+.+++......+.+.|.+.... ...+ ++..-+... -..+++-|..+
T Consensus 431 rireKdI-pve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~-~~~~-lVk~~dk~~~N~vfwsPkG~fv 507 (698)
T KOG2314|consen 431 RIREKDI-PVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNI-KKPS-LVKELDKKFANTVFWSPKGRFV 507 (698)
T ss_pred EeeccCC-CceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCC-Cchh-hhhhhcccccceEEEcCCCcEE
Confidence 5443221 12222212223456799999999988876555566677665422 2222 332222222 23455566777
Q ss_pred EEEEecCCeeEEEEEEcCC
Q 006375 281 AVYEREGGLQKITTYRLPA 299 (648)
Q Consensus 281 ~~~~~~~~~~~l~v~~~~~ 299 (648)
++.........+..++.+.
T Consensus 508 vva~l~s~~g~l~F~D~~~ 526 (698)
T KOG2314|consen 508 VVAALVSRRGDLEFYDTDY 526 (698)
T ss_pred EEEEecccccceEEEecch
Confidence 7777766667888888773
No 203
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=98.04 E-value=0.00074 Score=62.55 Aligned_cols=149 Identities=15% Similarity=0.149 Sum_probs=88.2
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCc---cceeEEecCCeEEEEEeCCC--------
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV---TASVEWAGNEALVYITMDEI-------- 147 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~---~~~~~WspDg~l~y~~~~~~-------- 147 (648)
...+..+.++||++.||-+ | +..|+++|+.++.+.+. ++++. ...+.|--||+..|++..+.
T Consensus 40 dsqVNrLeiTpdk~~LAaa----~--~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR 113 (311)
T KOG0315|consen 40 DSQVNRLEITPDKKDLAAA----G--NQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLR 113 (311)
T ss_pred ccceeeEEEcCCcchhhhc----c--CCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEecc
Confidence 4466788999999999965 3 56899999999876432 33332 34477888885556654321
Q ss_pred -----------------------------CCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccc
Q 006375 148 -----------------------------LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKIT 198 (648)
Q Consensus 148 -----------------------------~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~ 198 (648)
.+...|+.+||+...-..+++ .|. ....-++...|||++++. .+++
T Consensus 114 ~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~li-Pe~-~~~i~sl~v~~dgsml~a-~nnk-- 188 (311)
T KOG0315|consen 114 SLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELI-PED-DTSIQSLTVMPDGSMLAA-ANNK-- 188 (311)
T ss_pred CcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccC-CCC-CcceeeEEEcCCCcEEEE-ecCC--
Confidence 112335556665542222222 122 234446788999998874 3433
Q ss_pred cEEEEEECCCCC---ceeEeeecccc----eeeeEeecCCEEEEEecc
Q 006375 199 RFVFYLDVSKPE---ELRVLTPRVVG----VDTAASHRGNHFFITRRS 239 (648)
Q Consensus 199 ~~l~~~dl~~~~---~~~~l~~~~~~----~~~~~s~dg~~l~~~~~~ 239 (648)
...|++++-+.. ++.++.+-... ....+|||+++|+-.+.+
T Consensus 189 G~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssd 236 (311)
T KOG0315|consen 189 GNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSD 236 (311)
T ss_pred ccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCC
Confidence 356777765544 34444432221 234599999988766554
No 204
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.01 E-value=0.00016 Score=70.09 Aligned_cols=211 Identities=18% Similarity=0.150 Sum_probs=109.7
Q ss_pred EEEEecCCCCCCCCCCCchhHHHHH-HCCCE--EEEEccCCCC--CCChhhhhccc-------ccCCCC-----cHhHHH
Q 006375 408 LLLYGYGSYEICNDPAFNSSRLSLL-DRGFI--FAIAQIRGGG--ELGRQWYENGK-------FLKKKN-----TFTDFI 470 (648)
Q Consensus 408 ~vl~~hGg~~~~~~~~~~~~~~~l~-~~G~~--v~~~~~rG~g--~~g~~~~~~~~-------~~~~~~-----~~~D~~ 470 (648)
..|++||..+. ..+|...+..+. +.|.+ ++.+++.-.| .+...|..... ..+..+ ...=+.
T Consensus 13 PTifihG~~gt--~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 13 PTIFIHGYGGT--ANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp EEEEE--TTGG--CCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred cEEEECCCCCC--hhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 46778884443 345777788886 55543 5555554322 22223322100 111221 234466
Q ss_pred HHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCC-----ceeEEEecCCcccccccccCCCCCCCcccccccCCCC
Q 006375 471 ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----LFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPW 545 (648)
Q Consensus 471 ~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~ 545 (648)
.++.+|.++..+ .++-++||||||..+..++..+.. .++.+|..++..|-...... . ........-| |.
T Consensus 91 ~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~-~--~~~~~~~~~g-p~ 164 (255)
T PF06028_consen 91 KVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMND-D--QNQNDLNKNG-PK 164 (255)
T ss_dssp HHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC----TTTT-CSTT--BS
T ss_pred HHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccc-c--chhhhhcccC-Cc
Confidence 788888888665 899999999999999888877422 35666666655554332211 0 0001112224 52
Q ss_pred -CHHHHHHHHcC-CccccCCCCCCCeEEEeecC------CCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCC
Q 006375 546 -KEEFYFYMKSY-SPVDNVKAQNYPHILVTAGL------NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS 617 (648)
Q Consensus 546 -~~~~~~~~~~~-sp~~~~~~~~~P~~li~~g~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~ 617 (648)
.-+.+..+.+. . .++.+ +. .||-+.|. .|-+||...++.+..-++......+-+.+... ++.|....
T Consensus 165 ~~~~~y~~l~~~~~--~~~p~-~i-~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~-~a~HS~Lh 239 (255)
T PF06028_consen 165 SMTPMYQDLLKNRR--KNFPK-NI-QVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGK-DAQHSQLH 239 (255)
T ss_dssp S--HHHHHHHHTHG--GGSTT-T--EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESG-GGSCCGGG
T ss_pred ccCHHHHHHHHHHH--hhCCC-Ce-EEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECC-CCccccCC
Confidence 33344444332 1 11111 23 49999998 89999988887776666655445555566532 56786554
Q ss_pred chHHHHHHHHHHHHHHH
Q 006375 618 GRFERLREAAFTYTFLM 634 (648)
Q Consensus 618 ~~~~~~~~~~~~~~fl~ 634 (648)
...+..+ .+..||.
T Consensus 240 eN~~V~~---~I~~FLw 253 (255)
T PF06028_consen 240 ENPQVDK---LIIQFLW 253 (255)
T ss_dssp CCHHHHH---HHHHHHC
T ss_pred CCHHHHH---HHHHHhc
Confidence 4443222 4456764
No 205
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=98.01 E-value=0.00074 Score=66.25 Aligned_cols=126 Identities=18% Similarity=0.108 Sum_probs=73.8
Q ss_pred CCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc--cCccceeEEecCC-eEEEEEeCCCCCCceEE
Q 006375 78 RGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE-ALVYITMDEILRPDKAW 154 (648)
Q Consensus 78 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~ 154 (648)
|+.. +-..++||||++||- |+...++++||+.|..+.-..- .+-...++||||| .|+-... ...|.
T Consensus 114 H~e~-Vl~~~fsp~g~~l~t-----GsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~-----dg~I~ 182 (480)
T KOG0271|consen 114 HGEA-VLSVQFSPTGSRLVT-----GSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSK-----DGSIR 182 (480)
T ss_pred CCCc-EEEEEecCCCceEEe-----cCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhcccc-----CCeEE
Confidence 4433 346799999999873 4447899999999877654321 2234569999999 7754322 34577
Q ss_pred EEECCCCCCCcEEEEeecCCCeEEEEEe-----CCCCcEEEEEEccccccEEEEEECCCCCceeEeeecc
Q 006375 155 LHKLEADQSNDICLYHEKDDIYSLGLQA-----SESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV 219 (648)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~ 219 (648)
+++..+++..-.. +..+ ..+...++| .|..++++ ++..++.+.++|+..+.....+....
T Consensus 183 lwdpktg~~~g~~-l~gH-~K~It~Lawep~hl~p~~r~la---s~skDg~vrIWd~~~~~~~~~lsgHT 247 (480)
T KOG0271|consen 183 LWDPKTGQQIGRA-LRGH-KKWITALAWEPLHLVPPCRRLA---SSSKDGSVRIWDTKLGTCVRTLSGHT 247 (480)
T ss_pred EecCCCCCccccc-ccCc-ccceeEEeecccccCCCcccee---cccCCCCEEEEEccCceEEEEeccCc
Confidence 8887776432222 2222 334444444 45667554 22233556677776654233343333
No 206
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.01 E-value=3.8e-05 Score=85.17 Aligned_cols=99 Identities=13% Similarity=0.053 Sum_probs=67.4
Q ss_pred CCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChh--hh-----hc---cc---------ccCCCCc
Q 006375 405 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ--WY-----EN---GK---------FLKKKNT 465 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~--~~-----~~---~~---------~~~~~~~ 465 (648)
..|+||++||-.+... .|...+..|+++||.|+++|+||+|..... +. .. +. +.+-...
T Consensus 448 g~P~VVllHG~~g~~~--~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE--NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CCcEEEEeCCCCCCHH--HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 4589999999655433 355666788889999999999999865322 00 00 00 0122345
Q ss_pred HhHHHHHHHHHH------Hc----CCCCCCeEEEEeeChhHHHHHHHHhh
Q 006375 466 FTDFIACAEYLI------KN----CYCTKEKLCIEGRSAGGLLIGAVLNM 505 (648)
Q Consensus 466 ~~D~~~~~~~l~------~~----~~~d~~~i~i~G~S~GG~l~~~~~~~ 505 (648)
+.|+......|. .. +..+..++.++||||||.++..++..
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 677777777776 11 12456899999999999998887764
No 207
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.01 E-value=0.00061 Score=74.60 Aligned_cols=116 Identities=12% Similarity=0.114 Sum_probs=76.5
Q ss_pred EeeEEeCCCCCEEEEEEeCC-------CCeEEEEEEEECCCCCeeeccccCccceeEEecCC-eEEEEEeCCCCCCceEE
Q 006375 83 VGCFQVSPDNKLVAYAEDTK-------GDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAW 154 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~-------G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~ 154 (648)
+..|+|||||+.|+|..+.+ .+...+|+++++++++... .+.+....+.||||| +|+|+.. .+|+
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~-~~~g~Issl~wSpDG~RiA~i~~------g~v~ 471 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS-RVPGPISELQLSRDGVRAAMIIG------GKVY 471 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh-ccCCCcCeEEECCCCCEEEEEEC------CEEE
Confidence 67899999999998886531 1124588999998887754 444445679999999 9999872 2577
Q ss_pred E---EECCCCCCCcEEE-----EeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 155 L---HKLEADQSNDICL-----YHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 155 ~---~~l~~~~~~~~~~-----~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
. ...+.+ + ..+ .......-..++.|..|++.+ +. .......+|.+++++..
T Consensus 472 Va~Vvr~~~G--~-~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~-~~~~~~~v~~v~vDG~~ 530 (591)
T PRK13616 472 LAVVEQTEDG--Q-YALTNPREVGPGLGDTAVSLDWRTGDSLV-VG-RSDPEHPVWYVNLDGSN 530 (591)
T ss_pred EEEEEeCCCC--c-eeecccEEeecccCCccccceEecCCEEE-EE-ecCCCCceEEEecCCcc
Confidence 6 443343 1 222 111111112457899999844 43 33455779999999775
No 208
>PTZ00420 coronin; Provisional
Probab=98.00 E-value=0.004 Score=67.67 Aligned_cols=199 Identities=13% Similarity=0.047 Sum_probs=107.3
Q ss_pred EEEeeEEeCCC-CCEEEEEEeCCCCeEEEEEEEECCCCCe-ee------cccc---CccceeEEecCC-eEEEEEeCCCC
Q 006375 81 YSVGCFQVSPD-NKLVAYAEDTKGDEIYTVYVIDIETGTP-VG------KPLV---GVTASVEWAGNE-ALVYITMDEIL 148 (648)
Q Consensus 81 ~~~~~~~~SPD-G~~la~~~~~~G~e~~~l~v~dl~~g~~-~~------~~~~---~~~~~~~WspDg-~l~y~~~~~~~ 148 (648)
-.+..+.|||+ +++||-.. .+| .|+|||+.++.. .. ..+. .....++|+|++ .++.+...
T Consensus 75 ~~V~~lafsP~~~~lLASgS-~Dg----tIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~--- 146 (568)
T PTZ00420 75 SSILDLQFNPCFSEILASGS-EDL----TIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGF--- 146 (568)
T ss_pred CCEEEEEEcCCCCCEEEEEe-CCC----eEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeC---
Confidence 35778899997 67665443 233 799999976432 10 0111 224569999999 77655442
Q ss_pred CCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccce--ee--
Q 006375 149 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV--DT-- 224 (648)
Q Consensus 149 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~--~~-- 224 (648)
...|.++++.++. ....+.. ......+.|++||+.|+..+ ....|.++|+.+++....+....... ..
T Consensus 147 -DgtIrIWDl~tg~--~~~~i~~--~~~V~SlswspdG~lLat~s---~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~ 218 (568)
T PTZ00420 147 -DSFVNIWDIENEK--RAFQINM--PKKLSSLKWNIKGNLLSGTC---VGKHMHIIDPRKQEIASSFHIHDGGKNTKNIW 218 (568)
T ss_pred -CCeEEEEECCCCc--EEEEEec--CCcEEEEEECCCCCEEEEEe---cCCEEEEEECCCCcEEEEEecccCCceeEEEE
Confidence 2347888888763 2222222 23345789999999886543 23568999998876222232222211 11
Q ss_pred --eEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeC--CEEEEEEecCCeeEEEEEEcC
Q 006375 225 --AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 225 --~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~l~v~~~~ 298 (648)
.++++++.|+-.... +.....|.+.|+.........+..+.........++. +.+++....+ ..+++|++.
T Consensus 219 ~~~fs~d~~~IlTtG~d-~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD--~tIr~~e~~ 293 (568)
T PTZ00420 219 IDGLGGDDNYILSTGFS-KNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGD--GNCRYYQHS 293 (568)
T ss_pred eeeEcCCCCEEEEEEcC-CCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECC--CeEEEEEcc
Confidence 134777766554443 2223468888887533222122222111111122222 3444444433 456777775
No 209
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.99 E-value=0.00051 Score=65.56 Aligned_cols=51 Identities=25% Similarity=0.277 Sum_probs=41.9
Q ss_pred HHHHHHHHHc-CCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 006375 470 IACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 520 (648)
Q Consensus 470 ~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~ 520 (648)
..-+.=.+++ .-+|++|.+|+|+|+||++++.++..+|+.|.+.++.+|-+
T Consensus 121 ~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 121 TEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 3444433444 56899999999999999999999999999999999999843
No 210
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=97.98 E-value=0.00022 Score=69.33 Aligned_cols=123 Identities=17% Similarity=0.208 Sum_probs=76.2
Q ss_pred CCceEEEecccccCCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc--cCccceeEEecCC-eE
Q 006375 63 PPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE-AL 139 (648)
Q Consensus 63 ~~~~~lld~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~WspDg-~l 139 (648)
...+|+=|+ |+..+..++|.+||..++=++- | ...|.|||+++|.-.+... .+-.+.+.||||| .|
T Consensus 185 ~~~qvl~~p-------gh~pVtsmqwn~dgt~l~tAS~--g--sssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~l 253 (445)
T KOG2139|consen 185 HHLQVLQDP-------GHNPVTSMQWNEDGTILVTASF--G--SSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVL 253 (445)
T ss_pred cchhheeCC-------CCceeeEEEEcCCCCEEeeccc--C--cceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEE
Confidence 344565554 4467889999999998875543 3 3578999999988765432 2224568999999 87
Q ss_pred EEEEeCCCCCCceEE-EEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECC
Q 006375 140 VYITMDEILRPDKAW-LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 207 (648)
Q Consensus 140 ~y~~~~~~~~~~~l~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~ 207 (648)
|-.+.+. ...|| .++.-+. + +-+. ..+..-...|||+|++|+|.... ...||.+...
T Consensus 254 faAt~da---vfrlw~e~q~wt~--e-rw~l---gsgrvqtacWspcGsfLLf~~sg--sp~lysl~f~ 311 (445)
T KOG2139|consen 254 FAATCDA---VFRLWQENQSWTK--E-RWIL---GSGRVQTACWSPCGSFLLFACSG--SPRLYSLTFD 311 (445)
T ss_pred EEecccc---eeeeehhccccee--c-ceec---cCCceeeeeecCCCCEEEEEEcC--CceEEEEeec
Confidence 7666543 23344 2222221 1 1111 12233466899999999997642 3455655543
No 211
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=97.95 E-value=0.0038 Score=61.53 Aligned_cols=193 Identities=15% Similarity=0.149 Sum_probs=113.7
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-c-ccCccceeEEecCCeEEEEEeCCCCCCceEEEEECC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~-~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
.+..+.|+|++++|+.... + ..|+++++.+++.... . .......+.|+|++.++++.. ....|+.+++.
T Consensus 53 ~i~~~~~~~~~~~l~~~~~-~----~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~i~~~~~~ 123 (289)
T cd00200 53 PVRDVAASADGTYLASGSS-D----KTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSS----RDKTIKVWDVE 123 (289)
T ss_pred ceeEEEECCCCCEEEEEcC-C----CeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEec----CCCeEEEEECC
Confidence 3467899999988887654 2 3799999988654432 1 122345589999985555543 23458888887
Q ss_pred CCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc-eeeeEeecCCEEEEEec
Q 006375 160 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRR 238 (648)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~~ 238 (648)
+. +....+... ......+.++|++++++... ....|+++|+.+++....+...... ....|+++++.+++.+.
T Consensus 124 ~~--~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~---~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 197 (289)
T cd00200 124 TG--KCLTTLRGH-TDWVNSVAFSPDGTFVASSS---QDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSS 197 (289)
T ss_pred Cc--EEEEEeccC-CCcEEEEEEcCcCCEEEEEc---CCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecC
Confidence 54 223333322 22344678999988776543 2356889998866522233222212 23458899988877765
Q ss_pred cCCCCCcEEEEEeCCCCCcceeEe-cCCCCcccceEEEeCCE-EEEEEecCCeeEEEEEEcCC
Q 006375 239 SDELFNSELLACPVDNTSETTVLI-PHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLPA 299 (648)
Q Consensus 239 ~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~l~v~~~~~ 299 (648)
. ..+..+++....... .+ .+.. .+..+.+.++. +++....+ ..+.++++..
T Consensus 198 ~-----~~i~i~d~~~~~~~~-~~~~~~~--~i~~~~~~~~~~~~~~~~~~--~~i~i~~~~~ 250 (289)
T cd00200 198 D-----GTIKLWDLSTGKCLG-TLRGHEN--GVNSVAFSPDGYLLASGSED--GTIRVWDLRT 250 (289)
T ss_pred C-----CcEEEEECCCCceec-chhhcCC--ceEEEEEcCCCcEEEEEcCC--CcEEEEEcCC
Confidence 2 357777876522222 22 2222 35666776643 33333323 3677778763
No 212
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.94 E-value=0.00023 Score=73.43 Aligned_cols=85 Identities=12% Similarity=0.059 Sum_probs=56.5
Q ss_pred hHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhC
Q 006375 427 SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 506 (648)
Q Consensus 427 ~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~ 506 (648)
....|+. |+.|.+.|.+--+.- ....+.-.++|++..+...++. +.++ +-++|.|+||.+++++++..
T Consensus 122 ~V~~Ll~-g~dVYl~DW~~p~~v--------p~~~~~f~ldDYi~~l~~~i~~--~G~~-v~l~GvCqgG~~~laa~Al~ 189 (406)
T TIGR01849 122 TVEALLP-DHDVYITDWVNARMV--------PLSAGKFDLEDYIDYLIEFIRF--LGPD-IHVIAVCQPAVPVLAAVALM 189 (406)
T ss_pred HHHHHhC-CCcEEEEeCCCCCCC--------chhcCCCCHHHHHHHHHHHHHH--hCCC-CcEEEEchhhHHHHHHHHHH
Confidence 3467777 999999986522210 1123445678887655544433 3344 99999999999876555443
Q ss_pred -----CCceeEEEecCCccccc
Q 006375 507 -----PDLFKAAVAAVPFVDVL 523 (648)
Q Consensus 507 -----p~~~~a~v~~~~~~d~~ 523 (648)
|+.++.+++..+.+|..
T Consensus 190 a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 190 AENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred HhcCCCCCcceEEEEecCccCC
Confidence 55789999888888854
No 213
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.94 E-value=1.6e-05 Score=87.82 Aligned_cols=125 Identities=18% Similarity=0.211 Sum_probs=82.4
Q ss_pred EeEEEEEeeCccccCCCCcEEEEecCCCCCCCC-CCC--chhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccC-CCC
Q 006375 389 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAF--NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK-KKN 464 (648)
Q Consensus 389 i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~-~~~--~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~-~~~ 464 (648)
+.+.++.|+.. ...+ .|++|++|||.-.... ..| ......+..+..+|+.++||-|- +| |...+.... +-.
T Consensus 97 LylNV~tp~~~-~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~-lG--F~st~d~~~~gN~ 171 (545)
T KOG1516|consen 97 LYLNVYTPQGC-SESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGP-LG--FLSTGDSAAPGNL 171 (545)
T ss_pred ceEEEeccCCC-ccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEeccccee-ce--eeecCCCCCCCcc
Confidence 55565666553 2212 8999999997432222 222 12223445568999999999642 22 222222222 224
Q ss_pred cHhHHHHHHHHHHHc---CCCCCCeEEEEeeChhHHHHHHHHhhCC---CceeEEEecCCc
Q 006375 465 TFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPF 519 (648)
Q Consensus 465 ~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~~~a~v~~~~~ 519 (648)
.+.|...|++|+.++ -.-||++|.++|+|+||..+..++.. | .+|+.+|+.+|.
T Consensus 172 gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~S-p~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 172 GLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLS-PHSRGLFHKAISMSGN 231 (545)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcC-HhhHHHHHHHHhhccc
Confidence 678999999999876 33699999999999999988777763 4 378888888774
No 214
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=97.93 E-value=0.00022 Score=71.49 Aligned_cols=157 Identities=14% Similarity=0.179 Sum_probs=102.3
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee-ccccCccceeEEecCC-eEEEEEeCCCCCCceEEEEE
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~-~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~ 157 (648)
.-.+..+.+|||+++||+.-. ...|+++-..|++... ..+++....+.|+.|| .|+.+.. ..+||.++
T Consensus 303 ~~~~e~FeVShd~~fia~~G~-----~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~-----~GeV~v~n 372 (514)
T KOG2055|consen 303 EKSMERFEVSHDSNFIAIAGN-----NGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGG-----TGEVYVWN 372 (514)
T ss_pred cchhheeEecCCCCeEEEccc-----CceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcC-----CceEEEEe
Confidence 346778999999999998643 3478999999988664 3678888889999999 6655432 33799999
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECC--CCCceeEeeec---ccc-eeeeEeecCC
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS--KPEELRVLTPR---VVG-VDTAASHRGN 231 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~--~~~~~~~l~~~---~~~-~~~~~s~dg~ 231 (648)
++.. .-...+...+......++.|.+|+|++..+.++ --.||-.+-. +. .++++..- .-. ....|+||+.
T Consensus 373 l~~~--~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~G-iVNIYd~~s~~~s~-~PkPik~~dNLtt~Itsl~Fn~d~q 448 (514)
T KOG2055|consen 373 LRQN--SCLHRFVDDGSVHGTSLCISLNGSYLATGSDSG-IVNIYDGNSCFAST-NPKPIKTVDNLTTAITSLQFNHDAQ 448 (514)
T ss_pred cCCc--ceEEEEeecCccceeeeeecCCCceEEeccCcc-eEEEeccchhhccC-CCCchhhhhhhheeeeeeeeCcchh
Confidence 9887 334445444445566788899999988755443 2344432211 11 13333211 111 2346999999
Q ss_pred EEEEEeccCCCCCcEEEEEe
Q 006375 232 HFFITRRSDELFNSELLACP 251 (648)
Q Consensus 232 ~l~~~~~~~~~~~~~l~~~~ 251 (648)
.|++.++.. ....+|.-++
T Consensus 449 iLAiaS~~~-knalrLVHvP 467 (514)
T KOG2055|consen 449 ILAIASRVK-KNALRLVHVP 467 (514)
T ss_pred hhhhhhhcc-ccceEEEecc
Confidence 999988862 3335665554
No 215
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=97.93 E-value=0.0002 Score=68.80 Aligned_cols=189 Identities=16% Similarity=0.162 Sum_probs=107.6
Q ss_pred EEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec--cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCC
Q 006375 86 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQ 162 (648)
Q Consensus 86 ~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~ 162 (648)
..+||+|++||-.+ ++++.|+|..|=+.... -+..+.. +.|+.|+ .++-..+.+ ..|..+++..+
T Consensus 14 c~fSp~g~yiAs~~------~yrlviRd~~tlq~~qlf~cldki~y-ieW~ads~~ilC~~yk~----~~vqvwsl~Qp- 81 (447)
T KOG4497|consen 14 CSFSPCGNYIASLS------RYRLVIRDSETLQLHQLFLCLDKIVY-IEWKADSCHILCVAYKD----PKVQVWSLVQP- 81 (447)
T ss_pred eeECCCCCeeeeee------eeEEEEeccchhhHHHHHHHHHHhhh-eeeeccceeeeeeeecc----ceEEEEEeecc-
Confidence 47899999999776 46899999988766542 2344444 9999999 776655422 12555555433
Q ss_pred CCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc-eeeeEeecCCEEEEEeccCC
Q 006375 163 SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDE 241 (648)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~~~~~ 241 (648)
+-..-..++ +.-.....||||||.|+.++. -..+|-++.+.+.+ -..+.--..+ --+.+.+||+..++.++++-
T Consensus 82 -ew~ckIdeg-~agls~~~WSPdgrhiL~tse--F~lriTVWSL~t~~-~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDC 156 (447)
T KOG4497|consen 82 -EWYCKIDEG-QAGLSSISWSPDGRHILLTSE--FDLRITVWSLNTQK-GYLLPHPKTNVKGYAFHPDGQFCAILSRRDC 156 (447)
T ss_pred -eeEEEeccC-CCcceeeeECCCcceEeeeec--ceeEEEEEEeccce-eEEecccccCceeEEECCCCceeeeeecccH
Confidence 333333332 223346799999999987553 34566667776655 2222211122 23568899999888888753
Q ss_pred CCCcEEEEEeCCCCCccee-EecC--CCCcccceEEEeCCEEEEEEecCCe-eEEEEEEcC
Q 006375 242 LFNSELLACPVDNTSETTV-LIPH--RESVKLQDIQLFIDHLAVYEREGGL-QKITTYRLP 298 (648)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~-~~l~v~~~~ 298 (648)
..-.+|..+ ..| +..+ -+..++.+++|.+|+.++...++-. ..++.|...
T Consensus 157 kdyv~i~~c-------~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~ 210 (447)
T KOG4497|consen 157 KDYVQISSC-------KAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERG 210 (447)
T ss_pred HHHHHHHhh-------HHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeec
Confidence 322333211 123 1110 1122355666666655444444432 244555443
No 216
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=97.85 E-value=0.0061 Score=58.67 Aligned_cols=195 Identities=10% Similarity=0.128 Sum_probs=104.8
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee-ccccCccceeEEecCCeEEEEEeCCCCCCceEEEEECC
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~-~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
-.+..+..||-+... .+ ++..-+|++||+...+-.- ....+ ..-.++.|.|=++-+... ...|.++|+.
T Consensus 101 ~~V~sL~~sP~~d~F--lS---~S~D~tvrLWDlR~~~cqg~l~~~~-~pi~AfDp~GLifA~~~~----~~~IkLyD~R 170 (311)
T KOG1446|consen 101 KRVNSLSVSPKDDTF--LS---SSLDKTVRLWDLRVKKCQGLLNLSG-RPIAAFDPEGLIFALANG----SELIKLYDLR 170 (311)
T ss_pred ceEEEEEecCCCCeE--Ee---cccCCeEEeeEecCCCCceEEecCC-CcceeECCCCcEEEEecC----CCeEEEEEec
Confidence 456788899988643 32 2223489999998654321 11122 223778888833333321 1146666665
Q ss_pred CCCCCcEEEEeec--CCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEee--ecccc--eeeeEeecCCEE
Q 006375 160 ADQSNDICLYHEK--DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT--PRVVG--VDTAASHRGNHF 233 (648)
Q Consensus 160 ~~~~~~~~~~~~~--~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~--~~~~~--~~~~~s~dg~~l 233 (648)
.-.+..-..|.-. +..-+..+.+|||||+|+++.+ .+.+|++|.=+|+....+. ++... ....++|||+.+
T Consensus 171 s~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~---~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fv 247 (311)
T KOG1446|consen 171 SFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTN---ASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFV 247 (311)
T ss_pred ccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeC---CCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEE
Confidence 4333333333222 2222347899999999998754 3679999998886111121 12111 345689999865
Q ss_pred EEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEc
Q 006375 234 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRL 297 (648)
Q Consensus 234 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~ 297 (648)
+-.++ +.+|.+++++++.+.. .+.........-+.+.+.+..+... .+.+..|-.
T Consensus 248 l~gs~-----dg~i~vw~~~tg~~v~-~~~~~~~~~~~~~~fnP~~~mf~sa---~s~l~fw~p 302 (311)
T KOG1446|consen 248 LSGSD-----DGTIHVWNLETGKKVA-VLRGPNGGPVSCVRFNPRYAMFVSA---SSNLVFWLP 302 (311)
T ss_pred EEecC-----CCcEEEEEcCCCcEee-EecCCCCCCccccccCCceeeeeec---CceEEEEec
Confidence 44333 2578888887643222 2211112223334455565544443 244555543
No 217
>PRK04940 hypothetical protein; Provisional
Probab=97.83 E-value=0.00019 Score=64.79 Aligned_cols=118 Identities=17% Similarity=0.066 Sum_probs=67.4
Q ss_pred CeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHHHHHHHHcCCccccCCC
Q 006375 485 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKA 564 (648)
Q Consensus 485 ~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~ 564 (648)
++++++|.|+||+.|.+++.++. + .+|+..|.+.+...+.. .+... .+|. ...++..+.++
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P~~~L~~-~ig~~----~~y~-~~~~~h~~eL~---------- 120 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFPEENMEG-KIDRP----EEYA-DIATKCVTNFR---------- 120 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCChHHHHHH-HhCCC----cchh-hhhHHHHHHhh----------
Confidence 46999999999999999999875 3 46777787776543211 01000 0111 11233222333
Q ss_pred CCCC-eEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHH
Q 006375 565 QNYP-HILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 634 (648)
Q Consensus 565 ~~~P-~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 634 (648)
++-| ..+++..+.|.+.++.++.+.++.. .+.++. +|+.|.+. ..+. -+..+.+|+.
T Consensus 121 ~~~p~r~~vllq~gDEvLDyr~a~~~y~~~------y~~~v~---~GGdH~f~--~fe~--~l~~I~~F~~ 178 (180)
T PRK04940 121 EKNRDRCLVILSRNDEVLDSQRTAEELHPY------YEIVWD---EEQTHKFK--NISP--HLQRIKAFKT 178 (180)
T ss_pred hcCcccEEEEEeCCCcccCHHHHHHHhccC------ceEEEE---CCCCCCCC--CHHH--HHHHHHHHHh
Confidence 1222 3788889999999887776665332 022333 48888543 2221 2335677873
No 218
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=97.83 E-value=0.0018 Score=60.50 Aligned_cols=188 Identities=13% Similarity=0.111 Sum_probs=103.2
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc-ccCccceeEEecCC-eEEEEEeCCC------------
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEI------------ 147 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~------------ 147 (648)
++....|+|...-+.++... | -+|++||...++..... ..+-.....|+||| ++++...++.
T Consensus 66 svdql~w~~~~~d~~atas~-d---k~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~ 141 (313)
T KOG1407|consen 66 SVDQLCWDPKHPDLFATASG-D---KTIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIV 141 (313)
T ss_pred chhhheeCCCCCcceEEecC-C---ceEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEeccccee
Confidence 66678888876665555442 2 47999999998876532 22223458999999 8877654331
Q ss_pred --------------CCCceEEEEECCCCCCCcEEEEeecC--------CCeEEEEEeCCCCcEEEEEEccccccEEEEEE
Q 006375 148 --------------LRPDKAWLHKLEADQSNDICLYHEKD--------DIYSLGLQASESKKFLFIASESKITRFVFYLD 205 (648)
Q Consensus 148 --------------~~~~~l~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d 205 (648)
+-..+++...-|-+. -..+-|.+-. +.-.+-+.++|||||+++.+.+ .-+-++|
T Consensus 142 ~~~~~~~e~ne~~w~~~nd~Fflt~GlG~-v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsAD---AlvSLWD 217 (313)
T KOG1407|consen 142 NEEQFKFEVNEISWNNSNDLFFLTNGLGC-VEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSAD---ALVSLWD 217 (313)
T ss_pred ehhcccceeeeeeecCCCCEEEEecCCce-EEEEeccccccccccccCCcceEEEEECCCCceEeecccc---ceeeccC
Confidence 112334444443321 1122222111 2223346899999999875543 3344556
Q ss_pred CCCCCceeEeeecccce-eeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEE
Q 006375 206 VSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYE 284 (648)
Q Consensus 206 l~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 284 (648)
++.--=.+.++.....+ ..++|+||+.|+-.+.+ .-|-+..+++ +..-|-++.... .-.++|-+++.++.+
T Consensus 218 ~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSED-----h~IDIA~vet-Gd~~~eI~~~~~--t~tVAWHPk~~LLAy 289 (313)
T KOG1407|consen 218 VDELICERCISRLDWPVRTLSFSHDGRMLASASED-----HFIDIAEVET-GDRVWEIPCEGP--TFTVAWHPKRPLLAY 289 (313)
T ss_pred hhHhhhheeeccccCceEEEEeccCcceeeccCcc-----ceEEeEeccc-CCeEEEeeccCC--ceeEEecCCCceeeE
Confidence 55432012232222223 46799999977644432 3455666666 445565554433 345666666544444
Q ss_pred e
Q 006375 285 R 285 (648)
Q Consensus 285 ~ 285 (648)
.
T Consensus 290 A 290 (313)
T KOG1407|consen 290 A 290 (313)
T ss_pred E
Confidence 3
No 219
>PTZ00421 coronin; Provisional
Probab=97.79 E-value=0.0047 Score=66.48 Aligned_cols=160 Identities=16% Similarity=0.138 Sum_probs=91.7
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc--ccCccceeEEecCCeEEEEEeCCCCCCceEEEEEC
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~--~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l 158 (648)
..+..+.|+|++..+..+...+| .|.|||+++++..... -.+....++|+|||.++++... ...|..+++
T Consensus 126 ~~V~~l~f~P~~~~iLaSgs~Dg----tVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~----Dg~IrIwD~ 197 (493)
T PTZ00421 126 KKVGIVSFHPSAMNVLASAGADM----VVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSK----DKKLNIIDP 197 (493)
T ss_pred CcEEEEEeCcCCCCEEEEEeCCC----EEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecC----CCEEEEEEC
Confidence 45678899999753333433333 7999999998765321 1223456999999944444432 235888888
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEcc-ccccEEEEEECCCCC-ceeEeeecc-cce-eeeEeecCCEEE
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES-KITRFVFYLDVSKPE-ELRVLTPRV-VGV-DTAASHRGNHFF 234 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~-~~~~~l~~~dl~~~~-~~~~l~~~~-~~~-~~~~s~dg~~l~ 234 (648)
.++. ....+..+.........|.+++..|+....+ .....|.++|+.+.. ......... ... ...+++++..|+
T Consensus 198 rsg~--~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~ 275 (493)
T PTZ00421 198 RDGT--IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLY 275 (493)
T ss_pred CCCc--EEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEE
Confidence 8762 2222222222222346788888776644333 345789999997654 122211111 112 235788988776
Q ss_pred EEeccCCCCCcEEEEEeCCC
Q 006375 235 ITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~ 254 (648)
.....+ ..|..+++..
T Consensus 276 lggkgD----g~Iriwdl~~ 291 (493)
T PTZ00421 276 IGSKGE----GNIRCFELMN 291 (493)
T ss_pred EEEeCC----CeEEEEEeeC
Confidence 654321 3566666654
No 220
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=97.78 E-value=0.0084 Score=61.33 Aligned_cols=254 Identities=14% Similarity=0.119 Sum_probs=136.3
Q ss_pred CCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee------ccc-cCccceeEEecCC-eEEEEEeCCC
Q 006375 76 EGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG------KPL-VGVTASVEWAGNE-ALVYITMDEI 147 (648)
Q Consensus 76 ~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~------~~~-~~~~~~~~WspDg-~l~y~~~~~~ 147 (648)
-.||+-.+..+.+-|.|-+++ .|+-.++|..||+++....- ++- ......++||+.| .|+.++...
T Consensus 163 l~hgtk~Vsal~~Dp~GaR~~-----sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~a- 236 (641)
T KOG0772|consen 163 LKHGTKIVSALAVDPSGARFV-----SGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSA- 236 (641)
T ss_pred ccCCceEEEEeeecCCCceee-----eccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCc-
Confidence 347888899999999998876 36667899999998754321 111 2235569999999 887765422
Q ss_pred CCCceEEEEECCCCCCCcEEEEeecC----------C--CeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEe
Q 006375 148 LRPDKAWLHKLEADQSNDICLYHEKD----------D--IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL 215 (648)
Q Consensus 148 ~~~~~l~~~~l~~~~~~~~~~~~~~~----------~--~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l 215 (648)
+..+++-++- ...-+...| . .......|.|+.+-.++++...++-+||-++-...+ .+.+
T Consensus 237 ----qakl~DRdG~---~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q-~qVi 308 (641)
T KOG0772|consen 237 ----QAKLLDRDGF---EIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQ-LQVI 308 (641)
T ss_pred ----ceeEEccCCc---eeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhh-eeEE
Confidence 2333333221 111111111 0 011235799999999988877766666655433332 3444
Q ss_pred eeccc------ceeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCC-cceeEe--cCCCCcccceEEEeCCEEEEEEec
Q 006375 216 TPRVV------GVDTAASHRGNHFFITRRSDELFNSELLACPVDNTS-ETTVLI--PHRESVKLQDIQLFIDHLAVYERE 286 (648)
Q Consensus 216 ~~~~~------~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~ 286 (648)
.+... ...+.|++||.+|+-.... +.|-..+..+.. .....+ .|.....|..+.+..++-++..+
T Consensus 309 k~k~~~g~Rv~~tsC~~nrdg~~iAagc~D-----GSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSR- 382 (641)
T KOG0772|consen 309 KTKPAGGKRVPVTSCAWNRDGKLIAAGCLD-----GSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSR- 382 (641)
T ss_pred eeccCCCcccCceeeecCCCcchhhhcccC-----CceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhc-
Confidence 33322 1345699999986544332 334444432211 111122 24444456666666665555543
Q ss_pred CCeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCC---CCCEEEEEECCCCc
Q 006375 287 GGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLR---TPPSVYDYDMDMGI 356 (648)
Q Consensus 287 ~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~---~P~~~~~~d~~~~~ 356 (648)
.....+.+|++....+.+. ..+.+|.+ +.-....++++.. |+++-+|.. .++.|+-||..+-+
T Consensus 383 g~D~tLKvWDLrq~kkpL~-----~~tgL~t~-~~~tdc~FSPd~k-li~TGtS~~~~~~~g~L~f~d~~t~d 448 (641)
T KOG0772|consen 383 GFDDTLKVWDLRQFKKPLN-----VRTGLPTP-FPGTDCCFSPDDK-LILTGTSAPNGMTAGTLFFFDRMTLD 448 (641)
T ss_pred cCCCceeeeeccccccchh-----hhcCCCcc-CCCCccccCCCce-EEEecccccCCCCCceEEEEecccee
Confidence 3345688888874333221 11112211 0111123345544 555555442 55678888765544
No 221
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.70 E-value=0.0062 Score=65.41 Aligned_cols=199 Identities=17% Similarity=0.199 Sum_probs=111.1
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCe-eeccccC---ccceeEEecCCeEEEEEeCCCCCCceEEE
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGKPLVG---VTASVEWAGNEALVYITMDEILRPDKAWL 155 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~-~~~~~~~---~~~~~~WspDg~l~y~~~~~~~~~~~l~~ 155 (648)
...+....+||||+.++.+... ..+.++++.+++. +...+.+ ....+.|+|||.++.+..+ ...++.
T Consensus 159 ~~sv~~~~fs~~g~~l~~~~~~-----~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~----D~tiri 229 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRALAAASSD-----GLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSD----DKTLRI 229 (456)
T ss_pred cCceEEEEEcCCCCeEEEccCC-----CcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecC----CceEEE
Confidence 3556678999999998877542 2567777766651 1112222 2456999999954444433 345788
Q ss_pred EECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccccee-eeEeecCCEEE
Q 006375 156 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFF 234 (648)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~ 234 (648)
+++..+. .-..++. ....+...+.++|+|+.|+ ... .+..++++|+.+++..+.+......+. ..++++|..|+
T Consensus 230 wd~~~~~-~~~~~l~-gH~~~v~~~~f~p~g~~i~-Sgs--~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~ 304 (456)
T KOG0266|consen 230 WDLKDDG-RNLKTLK-GHSTYVTSVAFSPDGNLLV-SGS--DDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLV 304 (456)
T ss_pred eeccCCC-eEEEEec-CCCCceEEEEecCCCCEEE-Eec--CCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEE
Confidence 8883321 2233333 3345566889999995554 332 335678888888762334444444443 45889998665
Q ss_pred EEeccCCCCCcEEEEEeCCCCCcc-eeEecCCCCc-ccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 235 ITRRSDELFNSELLACPVDNTSET-TVLIPHRESV-KLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
-.+. +..|.+.|+.+.... ...+...+.. .+..+.+..+..++...... ..+.+|++.
T Consensus 305 s~s~-----d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d-~~~~~w~l~ 364 (456)
T KOG0266|consen 305 SASY-----DGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLD-RTLKLWDLR 364 (456)
T ss_pred EcCC-----CccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCC-CeEEEEEcc
Confidence 4422 356788888763211 1122222222 23444444544333322211 356666776
No 222
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=97.69 E-value=0.015 Score=55.99 Aligned_cols=148 Identities=19% Similarity=0.198 Sum_probs=84.4
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecccc---CccceeEEecCCeEEEEEeCCCCCCceEEEEECCC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~---~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
...+||+-|.+||.... +| .|.|+|+.|-.+-. .+. ....+++||+||+++.++.. ...+-.+++-.
T Consensus 27 ~~~~Fs~~G~~lAvGc~-nG----~vvI~D~~T~~iar-~lsaH~~pi~sl~WS~dgr~LltsS~----D~si~lwDl~~ 96 (405)
T KOG1273|consen 27 ECCQFSRWGDYLAVGCA-NG----RVVIYDFDTFRIAR-MLSAHVRPITSLCWSRDGRKLLTSSR----DWSIKLWDLLK 96 (405)
T ss_pred ceEEeccCcceeeeecc-CC----cEEEEEccccchhh-hhhccccceeEEEecCCCCEeeeecC----CceeEEEeccC
Confidence 36799999999999875 34 68889998855321 111 12456999999955555432 34577778776
Q ss_pred CCCCcEEEEeecCCCeEEEEEeCCCC--cEEEEEEccccccEEEEEECCCCCceeEeeecccc---eee---eEeecCCE
Q 006375 161 DQSNDICLYHEKDDIYSLGLQASESK--KFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG---VDT---AASHRGNH 232 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~Dg--~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~---~~~---~~s~dg~~ 232 (648)
+..-.+..| ..+.+ +..|.|-. +.++...... -++++...+. -+.|....++ ... .+.+.|++
T Consensus 97 gs~l~rirf--~spv~--~~q~hp~k~n~~va~~~~~s----p~vi~~s~~~-h~~Lp~d~d~dln~sas~~~fdr~g~y 167 (405)
T KOG1273|consen 97 GSPLKRIRF--DSPVW--GAQWHPRKRNKCVATIMEES----PVVIDFSDPK-HSVLPKDDDGDLNSSASHGVFDRRGKY 167 (405)
T ss_pred CCceeEEEc--cCccc--eeeeccccCCeEEEEEecCC----cEEEEecCCc-eeeccCCCccccccccccccccCCCCE
Confidence 632222233 22333 45566643 3333222221 4666776654 3444333222 111 26677887
Q ss_pred EEEEeccCCCCCcEEEEEeCCCC
Q 006375 233 FFITRRSDELFNSELLACPVDNT 255 (648)
Q Consensus 233 l~~~~~~~~~~~~~l~~~~~~~~ 255 (648)
|+.-+.. ++|..++.++.
T Consensus 168 IitGtsK-----Gkllv~~a~t~ 185 (405)
T KOG1273|consen 168 IITGTSK-----GKLLVYDAETL 185 (405)
T ss_pred EEEecCc-----ceEEEEecchh
Confidence 7644433 57888887663
No 223
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.68 E-value=0.00015 Score=77.46 Aligned_cols=128 Identities=20% Similarity=0.181 Sum_probs=74.9
Q ss_pred EEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCC-CCchhHHHHHHC-CCEEEEEccCCCCCCChhhhhccc------c
Q 006375 388 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-AFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGK------F 459 (648)
Q Consensus 388 ~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~-~~~~~~~~l~~~-G~~v~~~~~rG~g~~g~~~~~~~~------~ 459 (648)
+.....+.-... -+.+ .|++|++-| -+..... .....+..|+++ |..+++...| -||++..-... .
T Consensus 13 tf~qRY~~n~~~-~~~~-gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHR---yYG~S~P~~~~s~~nL~y 86 (434)
T PF05577_consen 13 TFSQRYWVNDQY-YKPG-GPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHR---YYGKSQPFGDLSTENLRY 86 (434)
T ss_dssp EEEEEEEEE-TT---TT-SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--T---TSTTB-TTGGGGGSTTTC
T ss_pred eEEEEEEEEhhh-cCCC-CCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehh---hhcCCCCccccchhhHHh
Confidence 344454555554 2223 789998844 3221110 011234466665 9999999999 45555422111 1
Q ss_pred cCCCCcHhHHHHHHHHHHHcC-CCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccc
Q 006375 460 LKKKNTFTDFIACAEYLIKNC-YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 521 (648)
Q Consensus 460 ~~~~~~~~D~~~~~~~l~~~~-~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d 521 (648)
+.-++.+.|+..-++++..+. ..+..++.++|+|+||.|++++-..+|++|.++++.++++.
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 222357899999999988653 34556999999999999999999999999999998877654
No 224
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.67 E-value=0.00084 Score=68.11 Aligned_cols=168 Identities=17% Similarity=0.186 Sum_probs=102.9
Q ss_pred hHHHHHHHHHHHcCCCCC--CeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccc-cccccCCCCCC----------
Q 006375 467 TDFIACAEYLIKNCYCTK--EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV-LTTMLDPTIPL---------- 533 (648)
Q Consensus 467 ~D~~~~~~~l~~~~~~d~--~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~-~~~~~~~~~~~---------- 533 (648)
-|.+.|+.+|+.+-.... -++.++|+|+||+|+..++.-.|..|.+++=.++.+-. +++.+...+-+
T Consensus 164 iD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~~~ 243 (403)
T PF11144_consen 164 IDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGEFF 243 (403)
T ss_pred HHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCccccccccccc
Confidence 688889999988743333 48999999999999999999999999999866554322 12221111110
Q ss_pred ----------Ccccc-cccCCCC--CHHHHHHHHcCCccccCCCC----CCCeEEEeecCCCCccCCchHHHHHHHHHhc
Q 006375 534 ----------TTAEW-EEWGDPW--KEEFYFYMKSYSPVDNVKAQ----NYPHILVTAGLNDPRVMYSEPAKFVAKLREM 596 (648)
Q Consensus 534 ----------~~~~~-~~~g~~~--~~~~~~~~~~~sp~~~~~~~----~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~ 596 (648)
....| ...++|. .++. ..++...-..++.-+ .-|-....|+..|+.+|+.+-.++++.+++.
T Consensus 244 ~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~-~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~l 322 (403)
T PF11144_consen 244 NFKNIRIYCFDKTFWTRNKNSPYYFSKAR-YIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKNL 322 (403)
T ss_pred ccCCEEEEEEeccccccCCCCccccChHH-HHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHHc
Confidence 00011 1112231 1111 233333222222211 2255778899999999999999999999999
Q ss_pred CCCCCeEEEEecC--------CCCccCCCchHHHHHHHHHHHHHHHHhcC
Q 006375 597 KTDDNILLFKCEL--------GAGHFSKSGRFERLREAAFTYTFLMRALS 638 (648)
Q Consensus 597 ~~~~~~~~~~~~~--------~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 638 (648)
|-++++.+++.+. +-.|+.+......++ .++.-+.+.+.
T Consensus 323 gfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~---KeLp~~lek~~ 369 (403)
T PF11144_consen 323 GFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFK---KELPLMLEKLQ 369 (403)
T ss_pred CCCeEEEEecChhhccchheeccccCCCCCHHHHHH---HHhHHHHHHhh
Confidence 9998888874322 245765555444333 34555555553
No 225
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.63 E-value=0.0086 Score=58.67 Aligned_cols=156 Identities=15% Similarity=0.037 Sum_probs=88.0
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEecCCeEEEEEeCCCCCCceEEEEECC
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
...+..+.+||||+.+|+.....+ ...|++....+.......-. ....++|+++|+++..... .....+++ +..
T Consensus 23 ~~~~~s~AvS~dg~~~A~v~~~~~--~~~L~~~~~~~~~~~~~~g~-~l~~PS~d~~g~~W~v~~~--~~~~~~~~-~~~ 96 (253)
T PF10647_consen 23 GYDVTSPAVSPDGSRVAAVSEGDG--GRSLYVGPAGGPVRPVLTGG-SLTRPSWDPDGWVWTVDDG--SGGVRVVR-DSA 96 (253)
T ss_pred CccccceEECCCCCeEEEEEEcCC--CCEEEEEcCCCcceeeccCC-ccccccccCCCCEEEEEcC--CCceEEEE-ecC
Confidence 345678999999999999983333 56899988765444332222 3456999999966655432 22222322 222
Q ss_pred CCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECC---CCC-----ceeEeeec-ccc-eeeeEeec
Q 006375 160 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS---KPE-----ELRVLTPR-VVG-VDTAASHR 229 (648)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~---~~~-----~~~~l~~~-~~~-~~~~~s~d 229 (648)
++......+-......-...+.+||||.++++.....+..+||+.-+. .+. ....+... ... ....|.++
T Consensus 97 ~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~ 176 (253)
T PF10647_consen 97 SGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDD 176 (253)
T ss_pred CCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCC
Confidence 221122222111111134478999999999998877777888887543 221 11122211 111 24568887
Q ss_pred CCEEEEEeccCCC
Q 006375 230 GNHFFITRRSDEL 242 (648)
Q Consensus 230 g~~l~~~~~~~~~ 242 (648)
+. |++.+...+.
T Consensus 177 ~~-L~V~~~~~~~ 188 (253)
T PF10647_consen 177 ST-LVVLGRSAGG 188 (253)
T ss_pred CE-EEEEeCCCCC
Confidence 76 5555554333
No 226
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.62 E-value=0.00031 Score=70.82 Aligned_cols=90 Identities=16% Similarity=0.131 Sum_probs=61.0
Q ss_pred hhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhh
Q 006375 426 SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 505 (648)
Q Consensus 426 ~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 505 (648)
.....++++|..|.+++.|+-... .. .........+++..|++.+.+. +..++|-++|.|.||.+..++++.
T Consensus 130 s~V~~l~~~g~~vfvIsw~nPd~~-~~-----~~~~edYi~e~l~~aid~v~~i--tg~~~InliGyCvGGtl~~~ala~ 201 (445)
T COG3243 130 SLVRWLLEQGLDVFVISWRNPDAS-LA-----AKNLEDYILEGLSEAIDTVKDI--TGQKDINLIGYCVGGTLLAAALAL 201 (445)
T ss_pred cHHHHHHHcCCceEEEeccCchHh-hh-----hccHHHHHHHHHHHHHHHHHHH--hCccccceeeEecchHHHHHHHHh
Confidence 346788899999999998753321 11 1111112225555777777765 334899999999999999888888
Q ss_pred CCCc-eeEEEecCCccccc
Q 006375 506 RPDL-FKAAVAAVPFVDVL 523 (648)
Q Consensus 506 ~p~~-~~a~v~~~~~~d~~ 523 (648)
.+.. ++.+......+|..
T Consensus 202 ~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 202 MAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred hhhcccccceeeecchhhc
Confidence 7776 77777666656643
No 227
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.62 E-value=0.002 Score=68.86 Aligned_cols=128 Identities=20% Similarity=0.209 Sum_probs=83.8
Q ss_pred EEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCc-hhHHHHHHCCCEEEEEccCCCCCCC----hhhhh--ccccc
Q 006375 388 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN-SSRLSLLDRGFIFAIAQIRGGGELG----RQWYE--NGKFL 460 (648)
Q Consensus 388 ~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~~~rG~g~~g----~~~~~--~~~~~ 460 (648)
.|..-+-.|.+. +++ .+..+-||+.......-. .....-+.+||+++.-| -|+.+.. ..|.. .....
T Consensus 16 ~i~fev~LP~~W---NgR--~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD-~Gh~~~~~~~~~~~~~n~~~~~d 89 (474)
T PF07519_consen 16 NIRFEVWLPDNW---NGR--FLQVGGGGFAGGINYADGKASMATALARGYATASTD-SGHQGSAGSDDASFGNNPEALLD 89 (474)
T ss_pred eEEEEEECChhh---ccC--eEEECCCeeeCcccccccccccchhhhcCeEEEEec-CCCCCCcccccccccCCHHHHHH
Confidence 566565667644 232 445555555433322110 01234467899999999 4444332 22320 01123
Q ss_pred CCCCcHhHHHHHHHHHHHcCC-CCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccc
Q 006375 461 KKKNTFTDFIACAEYLIKNCY-CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 521 (648)
Q Consensus 461 ~~~~~~~D~~~~~~~l~~~~~-~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d 521 (648)
+....+.+...+.+.|++..| ..|++-...|.|-||--++.+|.++|+.|.++|+.+|..+
T Consensus 90 fa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 90 FAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 344567788888888887744 5789999999999999999999999999999999999654
No 228
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.60 E-value=0.00022 Score=55.62 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=50.7
Q ss_pred CeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCc
Q 006375 386 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNT 465 (648)
Q Consensus 386 g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~ 465 (648)
|.+|......|++ .+..+|+++||-...+. .|...+..|+++||.|+..|.||+|..... ....+.
T Consensus 1 G~~L~~~~w~p~~-----~~k~~v~i~HG~~eh~~--ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~-------rg~~~~ 66 (79)
T PF12146_consen 1 GTKLFYRRWKPEN-----PPKAVVVIVHGFGEHSG--RYAHLAEFLAEQGYAVFAYDHRGHGRSEGK-------RGHIDS 66 (79)
T ss_pred CcEEEEEEecCCC-----CCCEEEEEeCCcHHHHH--HHHHHHHHHHhCCCEEEEECCCcCCCCCCc-------ccccCC
Confidence 4566666444433 14789999999543332 477778899999999999999999976421 111245
Q ss_pred HhHHHHHHHHH
Q 006375 466 FTDFIACAEYL 476 (648)
Q Consensus 466 ~~D~~~~~~~l 476 (648)
++++++-+..+
T Consensus 67 ~~~~v~D~~~~ 77 (79)
T PF12146_consen 67 FDDYVDDLHQF 77 (79)
T ss_pred HHHHHHHHHHH
Confidence 56666555443
No 229
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=97.60 E-value=0.015 Score=56.06 Aligned_cols=263 Identities=15% Similarity=0.114 Sum_probs=129.3
Q ss_pred EecccccCCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee-----ecccc-CccceeEEecCC-eEEE
Q 006375 69 LDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-----GKPLV-GVTASVEWAGNE-ALVY 141 (648)
Q Consensus 69 ld~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~-----~~~~~-~~~~~~~WspDg-~l~y 141 (648)
||.+.+.. | --.+..+.||-|||+||-.... -.|++|+++.=+.. ....+ +....++|+||- .+++
T Consensus 77 l~~~~LKg-H-~~~vt~~~FsSdGK~lat~~~D-----r~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv 149 (420)
T KOG2096|consen 77 LNVSVLKG-H-KKEVTDVAFSSDGKKLATISGD-----RSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVV 149 (420)
T ss_pred hhhhhhhc-c-CCceeeeEEcCCCceeEEEeCC-----ceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEE
Confidence 45555543 2 2357789999999999977642 36888888752211 11111 123458899998 6665
Q ss_pred EEeCCCCCCceEEEEECCCC--CC-------CcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCce
Q 006375 142 ITMDEILRPDKAWLHKLEAD--QS-------NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL 212 (648)
Q Consensus 142 ~~~~~~~~~~~l~~~~l~~~--~~-------~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~ 212 (648)
... +...|+.+.+... .+ .|-+-|++....-.+++.....+++|. ++ ..++.|.++++.+.. +
T Consensus 150 ~~~----~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~im-sa--s~dt~i~lw~lkGq~-L 221 (420)
T KOG2096|consen 150 SVK----RGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIM-SA--SLDTKICLWDLKGQL-L 221 (420)
T ss_pred EEc----cCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEE-Ee--cCCCcEEEEecCCce-e
Confidence 543 2234665554321 11 122223322222233444444555554 22 234678899998554 4
Q ss_pred eEeeecc-cceeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCccee---EecCCC-CcccceEEEeCC-EEEEEEec
Q 006375 213 RVLTPRV-VGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIPHRE-SVKLQDIQLFID-HLAVYERE 286 (648)
Q Consensus 213 ~~l~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~-~l~~~~~~ 286 (648)
.-+..+. .+....+||+|+.|+...-. +..+++-.=....+..+. ++.-.. ...+..+.+.++ ...+...+
T Consensus 222 ~~idtnq~~n~~aavSP~GRFia~~gFT---pDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSk 298 (420)
T KOG2096|consen 222 QSIDTNQSSNYDAAVSPDGRFIAVSGFT---PDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSK 298 (420)
T ss_pred eeeccccccccceeeCCCCcEEEEecCC---CCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEec
Confidence 4443332 33456699999976655433 344555433322122211 222111 122445555554 45667778
Q ss_pred CCeeEEEEEEcCC-CCCcccccCCCceeecCCCeeeee-CCCCcccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 287 GGLQKITTYRLPA-VGEPLKSLQGGKSVEFIDPVYSID-PSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 287 ~~~~~l~v~~~~~-~g~~~~~l~~~~~i~~~~~~~~v~-~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
+|.-++|=.++.- .++.+..|-.. .+.+- .+++-+ -+..+++++.+.+++.|. +..|..++|+
T Consensus 299 DG~wriwdtdVrY~~~qDpk~Lk~g-~~pl~-aag~~p~RL~lsP~g~~lA~s~gs~-----l~~~~se~g~ 363 (420)
T KOG2096|consen 299 DGKWRIWDTDVRYEAGQDPKILKEG-SAPLH-AAGSEPVRLELSPSGDSLAVSFGSD-----LKVFASEDGK 363 (420)
T ss_pred CCcEEEeeccceEecCCCchHhhcC-Ccchh-hcCCCceEEEeCCCCcEEEeecCCc-----eEEEEcccCc
Confidence 8876665333221 11211111111 01110 000100 134457777776665543 6666666665
No 230
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=97.57 E-value=0.006 Score=59.71 Aligned_cols=199 Identities=11% Similarity=0.065 Sum_probs=111.3
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc---ccCccceeEEecCC-eEEEEEeCCCCCCceEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP---LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~---~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~ 156 (648)
..+..++|.+ ..++|++-... ..|+++|-....+.... -.+ ...++|-|-+ .-+-+..... -=+|..
T Consensus 99 ~dlr~~aWhq--H~~~fava~nd---dvVriy~ksst~pt~Lks~sQrn-vtclawRPlsaselavgCr~g---IciW~~ 169 (445)
T KOG2139|consen 99 IDLRGVAWHQ--HIIAFAVATND---DVVRIYDKSSTCPTKLKSVSQRN-VTCLAWRPLSASELAVGCRAG---ICIWSD 169 (445)
T ss_pred cceeeEeech--hhhhhhhhccC---cEEEEeccCCCCCceecchhhcc-eeEEEeccCCcceeeeeecce---eEEEEc
Confidence 5677888888 55666654332 36777776553332211 122 3459999988 4333333211 001110
Q ss_pred E--------CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEee-eccccee-eeE
Q 006375 157 K--------LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGVD-TAA 226 (648)
Q Consensus 157 ~--------l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~-~~~~~~~-~~~ 226 (648)
+ +..+.+....++..+.........|.+||..++ +.+.+++.|.++|.+++. -++|. .+.+++. ..|
T Consensus 170 s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~--tAS~gsssi~iWdpdtg~-~~pL~~~glgg~slLkw 246 (445)
T KOG2139|consen 170 SRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILV--TASFGSSSIMIWDPDTGQ-KIPLIPKGLGGFSLLKW 246 (445)
T ss_pred CcccccccccccccccchhheeCCCCceeeEEEEcCCCCEEe--ecccCcceEEEEcCCCCC-cccccccCCCceeeEEE
Confidence 0 001111223344444434455679999997765 455677889999999987 45555 3445553 569
Q ss_pred eecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 227 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 227 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
||||++|+..+-+ ..++|+-..- ....++|++..+ .+++..|+..+-.+.+.--+.+.++....+
T Consensus 247 SPdgd~lfaAt~d---avfrlw~e~q-~wt~erw~lgsg---rvqtacWspcGsfLLf~~sgsp~lysl~f~ 311 (445)
T KOG2139|consen 247 SPDGDVLFAATCD---AVFRLWQENQ-SWTKERWILGSG---RVQTACWSPCGSFLLFACSGSPRLYSLTFD 311 (445)
T ss_pred cCCCCEEEEeccc---ceeeeehhcc-cceecceeccCC---ceeeeeecCCCCEEEEEEcCCceEEEEeec
Confidence 9999987666554 2366663221 123456766554 366666665543333334466777766655
No 231
>COG3150 Predicted esterase [General function prediction only]
Probab=97.55 E-value=0.0026 Score=55.63 Aligned_cols=115 Identities=17% Similarity=0.154 Sum_probs=61.3
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEe---cCCcccccccccCCCCCCCcccccccCC
Q 006375 467 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA---AVPFVDVLTTMLDPTIPLTTAEWEEWGD 543 (648)
Q Consensus 467 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~---~~~~~d~~~~~~~~~~~~~~~~~~~~g~ 543 (648)
....+-++-++.+. .|+ .++|+|.|.||+.+.++..+.- +++++. ..|.-++..+...+..|++..+|. -.
T Consensus 43 ~~a~~ele~~i~~~-~~~-~p~ivGssLGGY~At~l~~~~G--irav~~NPav~P~e~l~gylg~~en~ytg~~y~--le 116 (191)
T COG3150 43 QQALKELEKAVQEL-GDE-SPLIVGSSLGGYYATWLGFLCG--IRAVVFNPAVRPYELLTGYLGRPENPYTGQEYV--LE 116 (191)
T ss_pred HHHHHHHHHHHHHc-CCC-CceEEeecchHHHHHHHHHHhC--ChhhhcCCCcCchhhhhhhcCCCCCCCCcceEE--ee
Confidence 45555555555543 232 3999999999999999998753 555542 233333333333344455544331 00
Q ss_pred CCCHHHHHHHHcCCccccCCCCCCCeEEEeecCC-CCccCCchHHHHHHHHH
Q 006375 544 PWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLN-DPRVMYSEPAKFVAKLR 594 (648)
Q Consensus 544 ~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~-D~~v~~~~~~~~~~~l~ 594 (648)
+ .....+. ..+++.++-|..|++.... |.+..+.++..++....
T Consensus 117 ~---~hI~~l~----~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~~~ 161 (191)
T COG3150 117 S---RHIATLC----VLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYHPCY 161 (191)
T ss_pred h---hhHHHHH----HhhccccCCCcEEEeecccccHHHHHHHHHHHhhhhh
Confidence 1 1111111 1234455556566665555 88776665555554443
No 232
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.55 E-value=0.0084 Score=61.12 Aligned_cols=160 Identities=18% Similarity=0.144 Sum_probs=100.7
Q ss_pred HHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecC-CcccccccccC--CCCC-CCccccccc---CC
Q 006375 471 ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV-PFVDVLTTMLD--PTIP-LTTAEWEEW---GD 543 (648)
Q Consensus 471 ~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~-~~~d~~~~~~~--~~~~-~~~~~~~~~---g~ 543 (648)
++-+++.+....+.++.+|.|.|==|..+..+++ ...+++|+|..+ +++|+...+.. .... .+...+..| |-
T Consensus 158 ~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi 236 (367)
T PF10142_consen 158 AVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGI 236 (367)
T ss_pred HHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCc
Confidence 3334445545567899999999999998877777 445788877654 33333222100 0000 001111111 22
Q ss_pred C---CCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchH
Q 006375 544 P---WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRF 620 (648)
Q Consensus 544 ~---~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~ 620 (648)
. ..++..+.+.-.+|+...++.+.| -||+.|.+|+...+..+.-|+..|.. ++.+..+ ++++|.... .
T Consensus 237 ~~~l~tp~f~~L~~ivDP~~Y~~rL~~P-K~ii~atgDeFf~pD~~~~y~d~L~G---~K~lr~v---PN~~H~~~~--~ 307 (367)
T PF10142_consen 237 TQQLDTPEFDKLMQIVDPYSYRDRLTMP-KYIINATGDEFFVPDSSNFYYDKLPG---EKYLRYV---PNAGHSLIG--S 307 (367)
T ss_pred hhhcCCHHHHHHHHhcCHHHHHHhcCcc-EEEEecCCCceeccCchHHHHhhCCC---CeeEEeC---CCCCcccch--H
Confidence 2 345555566678999999888998 99999999999999999999999984 3223333 489996543 2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCC
Q 006375 621 ERLREAAFTYTFLMRALSMLPSV 643 (648)
Q Consensus 621 ~~~~~~~~~~~fl~~~l~~~~~~ 643 (648)
. ....+.+|+...+...+-|
T Consensus 308 ~---~~~~l~~f~~~~~~~~~lP 327 (367)
T PF10142_consen 308 D---VVQSLRAFYNRIQNGRPLP 327 (367)
T ss_pred H---HHHHHHHHHHHHHcCCCCC
Confidence 2 2224578888866554444
No 233
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.54 E-value=0.012 Score=60.23 Aligned_cols=195 Identities=13% Similarity=0.136 Sum_probs=121.9
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc-----ccCccceeEEecCC---eEEEEEeCCCCCCceEEEE
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-----LVGVTASVEWAGNE---ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~-----~~~~~~~~~WspDg---~l~y~~~~~~~~~~~l~~~ 156 (648)
-++||-|.+++|+.+ | ..|+|.++ |+..-..+ ..+ ...++|||-| .|+|-.....+.+..+..+
T Consensus 136 ~~k~s~~D~y~ARvv---~---~sl~i~e~-t~n~~~~p~~~lr~~g-i~dFsisP~~n~~~la~~tPEk~~kpa~~~i~ 207 (561)
T COG5354 136 VLKFSIDDKYVARVV---G---SSLYIHEI-TDNIEEHPFKNLRPVG-ILDFSISPEGNHDELAYWTPEKLNKPAMVRIL 207 (561)
T ss_pred eeeeeecchhhhhhc---c---CeEEEEec-CCccccCchhhccccc-eeeEEecCCCCCceEEEEccccCCCCcEEEEE
Confidence 468899999999885 3 37888887 55443222 222 3569999974 6677665445667777777
Q ss_pred ECCCCCCCc-EEEEeecCCCeEEEEEeCCCCcEEEEEEccc--------cccEEEEEECCCCCceeEeeecc-cceeeeE
Q 006375 157 KLEADQSND-ICLYHEKDDIYSLGLQASESKKFLFIASESK--------ITRFVFYLDVSKPEELRVLTPRV-VGVDTAA 226 (648)
Q Consensus 157 ~l~~~~~~~-~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~--------~~~~l~~~dl~~~~~~~~l~~~~-~~~~~~~ 226 (648)
.+..+.... ..++... .+.+.|.+.|++|++...+. +.++||++++.... +....... .-.++.|
T Consensus 208 sIp~~s~l~tk~lfk~~----~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~-i~V~~~~~~pVhdf~W 282 (561)
T COG5354 208 SIPKNSVLVTKNLFKVS----GVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS-IPVEKDLKDPVHDFTW 282 (561)
T ss_pred EccCCCeeeeeeeEeec----ccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc-cceeccccccceeeee
Confidence 777442111 1222221 24578999999999875432 34799999998665 33222222 2356779
Q ss_pred eecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 227 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 227 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
+|+++.+.+.+... ...+...|+.+ ..+..+|++..- -..|++...++++..-.+-...+.+++..
T Consensus 283 ~p~S~~F~vi~g~~---pa~~s~~~lr~--Nl~~~~Pe~~rN-T~~fsp~~r~il~agF~nl~gni~i~~~~ 348 (561)
T COG5354 283 EPLSSRFAVISGYM---PASVSVFDLRG--NLRFYFPEQKRN-TIFFSPHERYILFAGFDNLQGNIEIFDPA 348 (561)
T ss_pred cccCCceeEEeccc---ccceeeccccc--ceEEecCCcccc-cccccCcccEEEEecCCccccceEEeccC
Confidence 99999999887532 23566667654 233355555432 33466667777776665555566676655
No 234
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.54 E-value=0.0017 Score=72.10 Aligned_cols=142 Identities=16% Similarity=0.142 Sum_probs=78.5
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCC----------CCee-e------ccccC---ccceeEEecCCeE
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET----------GTPV-G------KPLVG---VTASVEWAGNEAL 139 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~----------g~~~-~------~~~~~---~~~~~~WspDg~l 139 (648)
...+..++|||||++||..+| ..-|.||+-+. |... . -.+.+ -...+.|+||+.+
T Consensus 69 ~~sv~CVR~S~dG~~lAsGSD-----D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~ 143 (942)
T KOG0973|consen 69 DGSVNCVRFSPDGSYLASGSD-----DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSL 143 (942)
T ss_pred cCceeEEEECCCCCeEeeccC-----cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccE
Confidence 457788999999999998655 34566666552 1110 0 01111 1346999999944
Q ss_pred EEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecc
Q 006375 140 VYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV 219 (648)
Q Consensus 140 ~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~ 219 (648)
+.+..- ...|..++..+- +...++..+ ....-++.|.|-|+|++-++.++ .|-++.+.+=.-.+.++...
T Consensus 144 lvS~s~----DnsViiwn~~tF--~~~~vl~~H-~s~VKGvs~DP~Gky~ASqsdDr---tikvwrt~dw~i~k~It~pf 213 (942)
T KOG0973|consen 144 LVSVSL----DNSVIIWNAKTF--ELLKVLRGH-QSLVKGVSWDPIGKYFASQSDDR---TLKVWRTSDWGIEKSITKPF 213 (942)
T ss_pred EEEecc----cceEEEEccccc--eeeeeeecc-cccccceEECCccCeeeeecCCc---eEEEEEcccceeeEeeccch
Confidence 444321 233666666554 334444433 33444789999999998655433 23333332211022333222
Q ss_pred c---ce----eeeEeecCCEEEEE
Q 006375 220 V---GV----DTAASHRGNHFFIT 236 (648)
Q Consensus 220 ~---~~----~~~~s~dg~~l~~~ 236 (648)
. .. ...|||||++|...
T Consensus 214 ~~~~~~T~f~RlSWSPDG~~las~ 237 (942)
T KOG0973|consen 214 EESPLTTFFLRLSWSPDGHHLASP 237 (942)
T ss_pred hhCCCcceeeecccCCCcCeecch
Confidence 1 11 23599999977543
No 235
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.53 E-value=0.001 Score=60.27 Aligned_cols=128 Identities=13% Similarity=0.154 Sum_probs=78.3
Q ss_pred hHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhC
Q 006375 427 SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 506 (648)
Q Consensus 427 ~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~ 506 (648)
.+..|+++|+.|+.+|-+ +-|.. ....+..-.|+...+++..++- ..+++.++|.|.|+-++-.+.++-
T Consensus 21 ~a~~l~~~G~~VvGvdsl------~Yfw~---~rtP~~~a~Dl~~~i~~y~~~w--~~~~vvLiGYSFGADvlP~~~nrL 89 (192)
T PF06057_consen 21 IAEALAKQGVPVVGVDSL------RYFWS---ERTPEQTAADLARIIRHYRARW--GRKRVVLIGYSFGADVLPFIYNRL 89 (192)
T ss_pred HHHHHHHCCCeEEEechH------HHHhh---hCCHHHHHHHHHHHHHHHHHHh--CCceEEEEeecCCchhHHHHHhhC
Confidence 357889999999999964 11111 1222345678888888777663 348999999999999888888887
Q ss_pred CC----ceeEEEecCCcccccccccCCCCCCCcccccccCCCCCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCc
Q 006375 507 PD----LFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPR 580 (648)
Q Consensus 507 p~----~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~ 580 (648)
|. .++.+++.+|-... .+. + ....| +|.+... .++.+...++++...+++++.|.+|.-
T Consensus 90 p~~~r~~v~~v~Ll~p~~~~-dFe----i--hv~~w--lg~~~~~------~~~~~~pei~~l~~~~v~CiyG~~E~d 152 (192)
T PF06057_consen 90 PAALRARVAQVVLLSPSTTA-DFE----I--HVSGW--LGMGGDD------AAYPVIPEIAKLPPAPVQCIYGEDEDD 152 (192)
T ss_pred CHHHHhheeEEEEeccCCcc-eEE----E--Ehhhh--cCCCCCc------ccCCchHHHHhCCCCeEEEEEcCCCCC
Confidence 76 45556666553211 110 0 01111 1222111 123444455566444599999998875
No 236
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.47 E-value=0.091 Score=61.00 Aligned_cols=194 Identities=10% Similarity=0.066 Sum_probs=104.8
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCC----e----e-eccccCccceeEEecCC-eEEEEEeCCCCCC
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT----P----V-GKPLVGVTASVEWAGNE-ALVYITMDEILRP 150 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~----~----~-~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~ 150 (648)
-.+..+.|||||++||-... ...|.||++.+.. . . ..........++|++.. .++.+... .
T Consensus 484 ~~V~~i~fs~dg~~latgg~-----D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~----D 554 (793)
T PLN00181 484 NLVCAIGFDRDGEFFATAGV-----NKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNF----E 554 (793)
T ss_pred CcEEEEEECCCCCEEEEEeC-----CCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeC----C
Confidence 34678899999999886542 2378888875421 1 0 00111223458998864 44444432 2
Q ss_pred ceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCC-CCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeE-ee
Q 006375 151 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAA-SH 228 (648)
Q Consensus 151 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~-Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~-s~ 228 (648)
..|.++++.++ +....+..+. .....+.|+| |+..|+..+ .+..|.++|+.++.....+..........| ++
T Consensus 555 g~v~lWd~~~~--~~~~~~~~H~-~~V~~l~~~p~~~~~L~Sgs---~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~ 628 (793)
T PLN00181 555 GVVQVWDVARS--QLVTEMKEHE-KRVWSIDYSSADPTLLASGS---DDGSVKLWSINQGVSIGTIKTKANICCVQFPSE 628 (793)
T ss_pred CeEEEEECCCC--eEEEEecCCC-CCEEEEEEcCCCCCEEEEEc---CCCEEEEEECCCCcEEEEEecCCCeEEEEEeCC
Confidence 35778888765 2333343332 3345778886 677665432 235688889887652222222111122335 34
Q ss_pred cCCEEEEEeccCCCCCcEEEEEeCCCCCccee-EecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 229 RGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 229 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
+|..|+..+. +..|..+|+........ +..+.. .+..+.+.....++....++ .+.+|++.
T Consensus 629 ~g~~latgs~-----dg~I~iwD~~~~~~~~~~~~~h~~--~V~~v~f~~~~~lvs~s~D~--~ikiWd~~ 690 (793)
T PLN00181 629 SGRSLAFGSA-----DHKVYYYDLRNPKLPLCTMIGHSK--TVSYVRFVDSSTLVSSSTDN--TLKLWDLS 690 (793)
T ss_pred CCCEEEEEeC-----CCeEEEEECCCCCccceEecCCCC--CEEEEEEeCCCEEEEEECCC--EEEEEeCC
Confidence 5665554433 24788888865322211 222322 34556665444445555554 47777775
No 237
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.47 E-value=0.011 Score=61.99 Aligned_cols=198 Identities=15% Similarity=0.092 Sum_probs=120.7
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc-c--cCccceeEEecCCeEEEEEeCCCCCCceEEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-L--VGVTASVEWAGNEALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~-~--~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~ 157 (648)
..+..+.|+|+|++||..... ..|.|+|++..+.+... . ....+.++|. +.++-+. .+...+..++
T Consensus 218 ~~vtSv~ws~~G~~LavG~~~-----g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssG----sr~~~I~~~d 286 (484)
T KOG0305|consen 218 ELVTSVKWSPDGSHLAVGTSD-----GTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSG----SRDGKILNHD 286 (484)
T ss_pred CceEEEEECCCCCEEEEeecC-----CeEEEEehhhccccccccCCcCceeEEEecc--CceEEEe----cCCCcEEEEE
Confidence 467788999999999998652 37899999887655432 2 1235678997 3232222 2334466666
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccccee-eeEeecCCEEEEE
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFIT 236 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~ 236 (648)
+...+..-. ....+ ..-..+..|++|+++++ ..+.++.++++|..+......+......+. ..|+|.-.-|+.+
T Consensus 287 vR~~~~~~~-~~~~H-~qeVCgLkws~d~~~lA---SGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAs 361 (484)
T KOG0305|consen 287 VRISQHVVS-TLQGH-RQEVCGLKWSPDGNQLA---SGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLAT 361 (484)
T ss_pred Eecchhhhh-hhhcc-cceeeeeEECCCCCeec---cCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEE
Confidence 665532212 22222 23455789999999986 445568899999865553344444444433 4588876666554
Q ss_pred eccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEE-EEEEecCCeeEEEEEEcCC
Q 006375 237 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHL-AVYEREGGLQKITTYRLPA 299 (648)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~l~v~~~~~ 299 (648)
.. |.....|...+..++...+ .-.....+..+.|.+.+- ++...-....++.||.++.
T Consensus 362 GG--Gs~D~~i~fwn~~~g~~i~---~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps 420 (484)
T KOG0305|consen 362 GG--GSADRCIKFWNTNTGARID---SVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS 420 (484)
T ss_pred cC--CCcccEEEEEEcCCCcEec---ccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc
Confidence 33 3455677777876532222 223345688899988762 3333333455788888874
No 238
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=97.46 E-value=0.00058 Score=66.96 Aligned_cols=112 Identities=14% Similarity=0.118 Sum_probs=70.1
Q ss_pred ceEEEecccccC----CCCc-EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC---ccceeEEecC
Q 006375 65 EHLILDENVKAE----GRGF-YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGN 136 (648)
Q Consensus 65 ~~~lld~n~~~~----~~~~-~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~WspD 136 (648)
.-.|.+|++... -.|. ..+....+||||++||-++- ...|.+|+-.+|+.+. ++.+ ....++||.|
T Consensus 347 tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSF-----DkSVkLW~g~tGk~la-sfRGHv~~VYqvawsaD 420 (480)
T KOG0271|consen 347 TLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASF-----DKSVKLWDGRTGKFLA-SFRGHVAAVYQVAWSAD 420 (480)
T ss_pred eEEEecccccccchhhhhchhhheeeEEECCCccEEEEeec-----ccceeeeeCCCcchhh-hhhhccceeEEEEeccC
Confidence 345566666541 1222 34568899999999997654 2468999999999875 3332 2456999999
Q ss_pred CeEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeec-CCCeEEEEEeCCCCcEEE
Q 006375 137 EALVYITMDEILRPDKAWLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLF 190 (648)
Q Consensus 137 g~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~s~Dg~~l~ 190 (648)
++|+.+...+ ..|-.+++.+. ++.++-+ ...-.+.+.|||||+.++
T Consensus 421 sRLlVS~SkD----sTLKvw~V~tk----Kl~~DLpGh~DEVf~vDwspDG~rV~ 467 (480)
T KOG0271|consen 421 SRLLVSGSKD----STLKVWDVRTK----KLKQDLPGHADEVFAVDWSPDGQRVA 467 (480)
T ss_pred ccEEEEcCCC----ceEEEEEeeee----eecccCCCCCceEEEEEecCCCceee
Confidence 9888876532 22444455443 2222111 111233578999999875
No 239
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.46 E-value=0.092 Score=52.42 Aligned_cols=263 Identities=17% Similarity=0.202 Sum_probs=127.9
Q ss_pred ceEEEecccccCCCCcEE---EeeEEeCCCCCEEEEEEe-----CCCCeEEEEEEEECCCCCeeec-cccC--------c
Q 006375 65 EHLILDENVKAEGRGFYS---VGCFQVSPDNKLVAYAED-----TKGDEIYTVYVIDIETGTPVGK-PLVG--------V 127 (648)
Q Consensus 65 ~~~lld~n~~~~~~~~~~---~~~~~~SPDG~~la~~~~-----~~G~e~~~l~v~dl~~g~~~~~-~~~~--------~ 127 (648)
...++|.++..- .|... ++++.+||||+.+..... ..|...--|-++|.+|=.+..+ .++. .
T Consensus 18 rv~viD~d~~k~-lGmi~~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~ 96 (342)
T PF06433_consen 18 RVYVIDADSGKL-LGMIDTGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPY 96 (342)
T ss_dssp EEEEEETTTTEE-EEEEEEESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--
T ss_pred eEEEEECCCCcE-EEEeecccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheeccc
Confidence 356677665432 23322 247889999999886531 2343334588899998655422 2221 1
Q ss_pred cceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEEC
Q 006375 128 TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV 206 (648)
Q Consensus 128 ~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl 206 (648)
...++.|+|| ++++.... -...|-.+|+... +.+-+-+-+.+.. +..+...++..+ +. .+.--.+.+|.
T Consensus 97 ~~~~~ls~dgk~~~V~N~T---Pa~SVtVVDl~~~----kvv~ei~~PGC~~-iyP~~~~~F~~l-C~-DGsl~~v~Ld~ 166 (342)
T PF06433_consen 97 KNMFALSADGKFLYVQNFT---PATSVTVVDLAAK----KVVGEIDTPGCWL-IYPSGNRGFSML-CG-DGSLLTVTLDA 166 (342)
T ss_dssp GGGEEE-TTSSEEEEEEES---SSEEEEEEETTTT----EEEEEEEGTSEEE-EEEEETTEEEEE-ET-TSCEEEEEETS
T ss_pred ccceEEccCCcEEEEEccC---CCCeEEEEECCCC----ceeeeecCCCEEE-EEecCCCceEEE-ec-CCceEEEEECC
Confidence 3458899999 55444332 2345778888764 2333333355542 222332233221 12 12222333443
Q ss_pred CCCCceeEeee---cccc---eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCc---cee-EecCC---CC-----c
Q 006375 207 SKPEELRVLTP---RVVG---VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE---TTV-LIPHR---ES-----V 268 (648)
Q Consensus 207 ~~~~~~~~l~~---~~~~---~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~---~~~-~~~~~---~~-----~ 268 (648)
++.. .+.-++ .... ....++.++.+++|.|-. ++|+.+++++... ..| +++.. .+ .
T Consensus 167 ~Gk~-~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~-----G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~ 240 (342)
T PF06433_consen 167 DGKE-AQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYE-----GNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGW 240 (342)
T ss_dssp TSSE-EEEEEEESSTTTS-B-S--EEETTTTEEEEEBTT-----SEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SS
T ss_pred CCCE-eEeeccccCCCCcccccccceECCCCeEEEEecC-----CEEEEEeccCCcccccCcccccCccccccCcCCcce
Confidence 3332 222111 1111 112355677889998775 4799999876321 123 22211 11 2
Q ss_pred ccceEEEeCCEEEEEEecC-------CeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeC
Q 006375 269 KLQDIQLFIDHLAVYEREG-------GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSL 341 (648)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~~-------~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~ 341 (648)
++.++....+++++.-..+ +..++|++++.+ ++.+ .++.++.+..+|. .+-+..-++|..+.
T Consensus 241 Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t-~krv------~Ri~l~~~~~Si~---Vsqd~~P~L~~~~~- 309 (342)
T PF06433_consen 241 QLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKT-HKRV------ARIPLEHPIDSIA---VSQDDKPLLYALSA- 309 (342)
T ss_dssp S-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTT-TEEE------EEEEEEEEESEEE---EESSSS-EEEEEET-
T ss_pred eeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCC-CeEE------EEEeCCCccceEE---EccCCCcEEEEEcC-
Confidence 2233333446776654332 235789888875 2222 2444443332332 22344445555543
Q ss_pred CCCCEEEEEECCCCc
Q 006375 342 RTPPSVYDYDMDMGI 356 (648)
Q Consensus 342 ~~P~~~~~~d~~~~~ 356 (648)
.-..++.+|..+|+
T Consensus 310 -~~~~l~v~D~~tGk 323 (342)
T PF06433_consen 310 -GDGTLDVYDAATGK 323 (342)
T ss_dssp -TTTEEEEEETTT--
T ss_pred -CCCeEEEEeCcCCc
Confidence 33679999999998
No 240
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.40 E-value=0.0034 Score=58.87 Aligned_cols=212 Identities=20% Similarity=0.198 Sum_probs=109.7
Q ss_pred CCcEEEEecCCCCCCCCCCCchhHHHHHHCC-----CEEEEEccCCCCCCChhhhhccc-------ccCCCCcHhH----
Q 006375 405 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRG-----FIFAIAQIRGGGELGRQWYENGK-------FLKKKNTFTD---- 468 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G-----~~v~~~~~rG~g~~g~~~~~~~~-------~~~~~~~~~D---- 468 (648)
..| .+++||..|...+ +......+++++ -.++.++.-|+-..-........ .+.+.....|
T Consensus 45 ~iP-TIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 45 AIP-TIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ccc-eEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 345 4577885555433 344455555554 45677776664321111111100 1122223333
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhC------CCceeEEEecCCcccccccccCCCCCCCcccccccC
Q 006375 469 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWG 542 (648)
Q Consensus 469 ~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g 542 (648)
+..++.||.++..+ .++-++||||||......+..+ |. ++..|+..+..+.-....++++ + +...-+
T Consensus 122 lk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~-lnK~V~l~gpfN~~~l~~de~v--~--~v~~~~ 194 (288)
T COG4814 122 LKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPP-LNKLVSLAGPFNVGNLVPDETV--T--DVLKDG 194 (288)
T ss_pred HHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcc-hhheEEecccccccccCCCcch--h--eeeccC
Confidence 45688899988765 7899999999999887777654 43 4555555544441111111111 0 110012
Q ss_pred CC-CCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCC------ccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccC
Q 006375 543 DP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDP------RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 615 (648)
Q Consensus 543 ~~-~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~------~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~ 615 (648)
.+ ..-..++++... +..+.+ +. -+|++.|+-|+ .||...++-.+.-+..+++....-+++.. ++-|.-
T Consensus 195 ~~~~~t~y~~y~~~n--~k~v~~-~~-evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk-~a~Hs~ 269 (288)
T COG4814 195 PGLIKTPYYDYIAKN--YKKVSP-NT-EVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGK-DARHSK 269 (288)
T ss_pred ccccCcHHHHHHHhc--ceeCCC-Cc-EEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCC-cchhhc
Confidence 11 122233333211 111111 34 38999998654 78888888877777766655544455543 678865
Q ss_pred CCchHHHHHHHHHHHHHHH
Q 006375 616 KSGRFERLREAAFTYTFLM 634 (648)
Q Consensus 616 ~~~~~~~~~~~~~~~~fl~ 634 (648)
..+.....+ .+..||.
T Consensus 270 lhen~~v~~---yv~~FLw 285 (288)
T COG4814 270 LHENPTVAK---YVKNFLW 285 (288)
T ss_pred cCCChhHHH---HHHHHhh
Confidence 544444333 3456664
No 241
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=97.40 E-value=0.14 Score=49.50 Aligned_cols=243 Identities=12% Similarity=0.075 Sum_probs=131.3
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-ccc--CccceeEEecCC-eEEEEEeCCCCCCceEEEEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV--GVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~--~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~ 157 (648)
.+..+.+|+||..|+-..+ + -.|.++|..+|+.+.. .-. ++. -+.|.... .+++.+. .....|.+..
T Consensus 16 ~i~sl~fs~~G~~litss~-d----Dsl~LYd~~~g~~~~ti~skkyG~~-~~~Fth~~~~~i~sSt---k~d~tIryLs 86 (311)
T KOG1446|consen 16 KINSLDFSDDGLLLITSSE-D----DSLRLYDSLSGKQVKTINSKKYGVD-LACFTHHSNTVIHSST---KEDDTIRYLS 86 (311)
T ss_pred ceeEEEecCCCCEEEEecC-C----CeEEEEEcCCCceeeEeeccccccc-EEEEecCCceEEEccC---CCCCceEEEE
Confidence 4567899999999887443 2 3799999999887642 112 333 37787666 7777654 3345688888
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEEe
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITR 237 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~ 237 (648)
+-+. +-...|..+.. -..++..+|-+..++ ++ .-+..|+++|+...+ .+-+..........++|.|-.++...
T Consensus 87 l~dN--kylRYF~GH~~-~V~sL~~sP~~d~Fl-S~--S~D~tvrLWDlR~~~-cqg~l~~~~~pi~AfDp~GLifA~~~ 159 (311)
T KOG1446|consen 87 LHDN--KYLRYFPGHKK-RVNSLSVSPKDDTFL-SS--SLDKTVRLWDLRVKK-CQGLLNLSGRPIAAFDPEGLIFALAN 159 (311)
T ss_pred eecC--ceEEEcCCCCc-eEEEEEecCCCCeEE-ec--ccCCeEEeeEecCCC-CceEEecCCCcceeECCCCcEEEEec
Confidence 8876 45566665533 345778888775443 22 233568888988665 22222222223345788884333332
Q ss_pred ccCCCCCcEEEEEeCCCC--Cccee-EecCCCCcccce--EEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCce
Q 006375 238 RSDELFNSELLACPVDNT--SETTV-LIPHRESVKLQD--IQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKS 312 (648)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~--~~~~~-~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~ 312 (648)
.. . .|-.+|+... +..+. .+.......... |+.+|+.+++.... +.+++++.=. |.... .
T Consensus 160 ~~---~--~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~---s~~~~lDAf~-G~~~~------t 224 (311)
T KOG1446|consen 160 GS---E--LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNA---SFIYLLDAFD-GTVKS------T 224 (311)
T ss_pred CC---C--eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCC---CcEEEEEccC-CcEee------e
Confidence 22 1 5666676532 23332 233222222333 44555566655543 3455554321 33211 1
Q ss_pred eecCCCeeeee-CCCCcccccEEEEEEeeCCCCCEEEEEECCCCcEEE
Q 006375 313 VEFIDPVYSID-PSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVL 359 (648)
Q Consensus 313 i~~~~~~~~v~-~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~ 359 (648)
.........++ +....||+.- ++..+ .-++++.|++++|+...
T Consensus 225 fs~~~~~~~~~~~a~ftPds~F-vl~gs---~dg~i~vw~~~tg~~v~ 268 (311)
T KOG1446|consen 225 FSGYPNAGNLPLSATFTPDSKF-VLSGS---DDGTIHVWNLETGKKVA 268 (311)
T ss_pred EeeccCCCCcceeEEECCCCcE-EEEec---CCCcEEEEEcCCCcEee
Confidence 11110011111 1334567773 33333 23679999999998543
No 242
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=97.40 E-value=0.017 Score=58.50 Aligned_cols=170 Identities=15% Similarity=0.183 Sum_probs=100.1
Q ss_pred EEEecccccCCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee-ccccCc-cceeEEecCC-eEEEEE
Q 006375 67 LILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGV-TASVEWAGNE-ALVYIT 143 (648)
Q Consensus 67 ~lld~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~-~~~~~~-~~~~~WspDg-~l~y~~ 143 (648)
.|-|.|.-... .-.+..++|.|.-..|. +...+| ..+||-+|-++...++ ..+... .....++|+| ..++++
T Consensus 202 rlkDaNa~~ps--~~~I~sv~FHp~~plll-vaG~d~--~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s 276 (514)
T KOG2055|consen 202 RLKDANAAHPS--HGGITSVQFHPTAPLLL-VAGLDG--TLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTS 276 (514)
T ss_pred eecccccCCcC--cCCceEEEecCCCceEE-EecCCC--cEEEEEecCccChhheeeeeccCccceeeecCCCceEEEec
Confidence 45666765443 34567788888766544 444445 4556655554444332 122332 3458899999 566664
Q ss_pred eCCCCCCceEEEEECCCCCCCcE-EEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc-
Q 006375 144 MDEILRPDKAWLHKLEADQSNDI-CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG- 221 (648)
Q Consensus 144 ~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~- 221 (648)
. +..-+|.+|+.+.+.... .++... ....-.+.+|+|+++|++..+ ...|+++...+++ +.--.+-.+.
T Consensus 277 ~----rrky~ysyDle~ak~~k~~~~~g~e-~~~~e~FeVShd~~fia~~G~---~G~I~lLhakT~e-li~s~KieG~v 347 (514)
T KOG2055|consen 277 G----RRKYLYSYDLETAKVTKLKPPYGVE-EKSMERFEVSHDSNFIAIAGN---NGHIHLLHAKTKE-LITSFKIEGVV 347 (514)
T ss_pred c----cceEEEEeeccccccccccCCCCcc-cchhheeEecCCCCeEEEccc---CceEEeehhhhhh-hhheeeeccEE
Confidence 3 333488899987632211 122111 233445788999999987643 4679999988876 2111111111
Q ss_pred eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCC
Q 006375 222 VDTAASHRGNHFFITRRSDELFNSELLACPVDNT 255 (648)
Q Consensus 222 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 255 (648)
....|+.||+.|+..... ++|+..|+...
T Consensus 348 ~~~~fsSdsk~l~~~~~~-----GeV~v~nl~~~ 376 (514)
T KOG2055|consen 348 SDFTFSSDSKELLASGGT-----GEVYVWNLRQN 376 (514)
T ss_pred eeEEEecCCcEEEEEcCC-----ceEEEEecCCc
Confidence 234588899887766443 48999999764
No 243
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=97.39 E-value=0.043 Score=52.93 Aligned_cols=161 Identities=14% Similarity=0.152 Sum_probs=89.1
Q ss_pred CceEEEecccccCC----CCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-
Q 006375 64 PEHLILDENVKAEG----RGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE- 137 (648)
Q Consensus 64 ~~~~lld~n~~~~~----~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg- 137 (648)
+..|+.|..++..+ .-...+.++.||+||++|.-++. ...|.+||+..|..+.. .++.......|.|-.
T Consensus 45 G~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~-----D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~ 119 (405)
T KOG1273|consen 45 GRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSR-----DWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKR 119 (405)
T ss_pred CcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecC-----CceeEEEeccCCCceeEEEccCccceeeeccccC
Confidence 55778887776421 12457889999999999875543 34789999999986643 445445558898876
Q ss_pred -eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEE---EeCCCCcEEEEEEccccccEEEEEECCCCC--c
Q 006375 138 -ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGL---QASESKKFLFIASESKITRFVFYLDVSKPE--E 211 (648)
Q Consensus 138 -~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~--~ 211 (648)
..+.+-.+.. -+..+++.+ ....+-...+....... .+.+-|++|+.. +++ ..|-+++.++-+ .
T Consensus 120 n~~va~~~~~s-----p~vi~~s~~--~h~~Lp~d~d~dln~sas~~~fdr~g~yIitG-tsK--Gkllv~~a~t~e~va 189 (405)
T KOG1273|consen 120 NKCVATIMEES-----PVVIDFSDP--KHSVLPKDDDGDLNSSASHGVFDRRGKYIITG-TSK--GKLLVYDAETLECVA 189 (405)
T ss_pred CeEEEEEecCC-----cEEEEecCC--ceeeccCCCccccccccccccccCCCCEEEEe-cCc--ceEEEEecchheeee
Confidence 3333333221 234444443 12222211111111122 267789988743 222 456777777755 1
Q ss_pred eeEeeecccceeeeEeecCCEEEEEecc
Q 006375 212 LRVLTPRVVGVDTAASHRGNHFFITRRS 239 (648)
Q Consensus 212 ~~~l~~~~~~~~~~~s~dg~~l~~~~~~ 239 (648)
.-+++.-..--...++..|+.|++-+.+
T Consensus 190 s~rits~~~IK~I~~s~~g~~liiNtsD 217 (405)
T KOG1273|consen 190 SFRITSVQAIKQIIVSRKGRFLIINTSD 217 (405)
T ss_pred eeeechheeeeEEEEeccCcEEEEecCC
Confidence 1122211111123477788877666553
No 244
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=97.38 E-value=0.13 Score=50.70 Aligned_cols=113 Identities=15% Similarity=0.255 Sum_probs=77.5
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec---cccCccceeEEecCCeEEEEEeCCCCCCceEEEEEC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~---~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l 158 (648)
++....||.||.+||=. +-+| .|.|++..+|...-. ...++.. +.|.|-+.|++....+ ..||.+.+
T Consensus 108 SVt~~~FshdgtlLATG-dmsG----~v~v~~~stg~~~~~~~~e~~dieW-l~WHp~a~illAG~~D----GsvWmw~i 177 (399)
T KOG0296|consen 108 SVTCCSFSHDGTLLATG-DMSG----KVLVFKVSTGGEQWKLDQEVEDIEW-LKWHPRAHILLAGSTD----GSVWMWQI 177 (399)
T ss_pred ceEEEEEccCceEEEec-CCCc----cEEEEEcccCceEEEeecccCceEE-EEecccccEEEeecCC----CcEEEEEC
Confidence 66788999999999832 3334 789999999876532 2233333 7889987555555433 35999999
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
... ....++..+...... -.+.||||.++.... +.-|.++++.++.
T Consensus 178 p~~--~~~kv~~Gh~~~ct~-G~f~pdGKr~~tgy~---dgti~~Wn~ktg~ 223 (399)
T KOG0296|consen 178 PSQ--ALCKVMSGHNSPCTC-GEFIPDGKRILTGYD---DGTIIVWNPKTGQ 223 (399)
T ss_pred CCc--ceeeEecCCCCCccc-ccccCCCceEEEEec---CceEEEEecCCCc
Confidence 885 355666665444332 357999999986544 4568888988887
No 245
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=97.32 E-value=0.0074 Score=57.95 Aligned_cols=197 Identities=15% Similarity=0.177 Sum_probs=102.3
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc-------c---cCccceeEEecCC-eEEEEEeCCCCCC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-------L---VGVTASVEWAGNE-ALVYITMDEILRP 150 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~-------~---~~~~~~~~WspDg-~l~y~~~~~~~~~ 150 (648)
.+...++||||++|+-.+ .+| -|-|||.-+|+.+.+- + +.....+.||.|+ .++-... +..
T Consensus 215 h~EcA~FSPDgqyLvsgS-vDG----FiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsq---DGk 286 (508)
T KOG0275|consen 215 HVECARFSPDGQYLVSGS-VDG----FIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQ---DGK 286 (508)
T ss_pred chhheeeCCCCceEeecc-ccc----eeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCc---CCc
Confidence 344678999999987543 234 6888999999876321 1 2223447778887 5543222 223
Q ss_pred ceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc-eeeeEeec
Q 006375 151 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHR 229 (648)
Q Consensus 151 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~d 229 (648)
-+||+ +.+++ -..-|+.....-...+.+|.|+..|+-.+. +.-+.+--+.+++-++.......- .+..+++|
T Consensus 287 IKvWr--i~tG~--ClRrFdrAHtkGvt~l~FSrD~SqiLS~sf---D~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~d 359 (508)
T KOG0275|consen 287 IKVWR--IETGQ--CLRRFDRAHTKGVTCLSFSRDNSQILSASF---DQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDD 359 (508)
T ss_pred EEEEE--Eecch--HHHHhhhhhccCeeEEEEccCcchhhcccc---cceEEEeccccchhHHHhcCccccccceEEcCC
Confidence 34454 55552 223343322233345688999999874333 233455556666511111111111 12348899
Q ss_pred CCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeC---CEEEEEEecCCeeEEEEEEcCCCCCc
Q 006375 230 GNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI---DHLAVYEREGGLQKITTYRLPAVGEP 303 (648)
Q Consensus 230 g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~l~v~~~~~~g~~ 303 (648)
|..+.-.+.+ ..+-+.+.++.+-....-+...+..+..+.+.+ .++++..+ .+.++++++. |+.
T Consensus 360 G~~iisaSsD-----gtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNr---sntv~imn~q--GQv 426 (508)
T KOG0275|consen 360 GHHIISASSD-----GTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNR---SNTVYIMNMQ--GQV 426 (508)
T ss_pred CCeEEEecCC-----ccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcC---CCeEEEEecc--ceE
Confidence 9887655553 234444544422111111222333445555544 35554443 3467888877 553
No 246
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.31 E-value=0.079 Score=57.22 Aligned_cols=148 Identities=13% Similarity=-0.017 Sum_probs=82.6
Q ss_pred EEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCC
Q 006375 86 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQS 163 (648)
Q Consensus 86 ~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~ 163 (648)
.=++|||+.|--. ......+.++|.++.+.... ..++......++||| ++|.+.++... ...+-.++.++.
T Consensus 198 ~PlpnDGk~l~~~----~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~-G~tl~em~a~e~-- 270 (635)
T PRK02888 198 IPLPNDGKDLDDP----KKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEE-GVTLAEMMAAER-- 270 (635)
T ss_pred cccCCCCCEeecc----cceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCccc-CcceeeeccccC--
Confidence 3468999977322 22356788889998776533 344444568999999 66666554322 223333333221
Q ss_pred CcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCC----CCceeE-eeecccceeeeEeecCCEEEEEec
Q 006375 164 NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK----PEELRV-LTPRVVGVDTAASHRGNHFFITRR 238 (648)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~----~~~~~~-l~~~~~~~~~~~s~dg~~l~~~~~ 238 (648)
....+|.-. . ...+.+||++.++. .+.+-++|..+ +..... |.-...-.-..+||||+++|....
T Consensus 271 d~~vvfni~--~---iea~vkdGK~~~V~-----gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVank 340 (635)
T PRK02888 271 DWVVVFNIA--R---IEEAVKAGKFKTIG-----GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGK 340 (635)
T ss_pred ceEEEEchH--H---HHHhhhCCCEEEEC-----CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCC
Confidence 122222111 1 01457899988862 46788999887 211222 221222233458999998765533
Q ss_pred cCCCCCcEEEEEeCCC
Q 006375 239 SDELFNSELLACPVDN 254 (648)
Q Consensus 239 ~~~~~~~~l~~~~~~~ 254 (648)
. . -.+-++|+++
T Consensus 341 l--S--~tVSVIDv~k 352 (635)
T PRK02888 341 L--S--PTVTVIDVRK 352 (635)
T ss_pred C--C--CcEEEEEChh
Confidence 2 2 2466667654
No 247
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=97.28 E-value=0.028 Score=62.66 Aligned_cols=117 Identities=12% Similarity=0.154 Sum_probs=74.3
Q ss_pred CEEEEEEeCCCCeEEEEEEEECCCCCeeeccc--cCccceeEEecCC-eEEE-EEeCCCCCCceEEEEECCCCCCCcEEE
Q 006375 93 KLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE-ALVY-ITMDEILRPDKAWLHKLEADQSNDICL 168 (648)
Q Consensus 93 ~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~WspDg-~l~y-~~~~~~~~~~~l~~~~l~~~~~~~~~~ 168 (648)
.+|||..+..| +|.++|.++...+...+ ......+.||||| .|+| ++...-.+...||+.+|.+..+....+
T Consensus 319 tkiAfv~~~~~----~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl 394 (912)
T TIGR02171 319 AKLAFRNDVTG----NLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKL 394 (912)
T ss_pred eeEEEEEcCCC----eEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEe
Confidence 47899988655 89999999877664322 2234459999999 9999 665432356679999999876543333
Q ss_pred Eeec--CCCeEEEEEeCCCCcEEEEE-Ecccc--------ccEEEEEECCCCC--ceeEeee
Q 006375 169 YHEK--DDIYSLGLQASESKKFLFIA-SESKI--------TRFVFYLDVSKPE--ELRVLTP 217 (648)
Q Consensus 169 ~~~~--~~~~~~~~~~s~Dg~~l~~~-~~~~~--------~~~l~~~dl~~~~--~~~~l~~ 217 (648)
--+. -|+|- +.+.|.-+++. ++..+ ....|.+....|+ ++++|..
T Consensus 395 ~ve~aaiprwr----v~e~gdt~ivyv~~a~nn~d~~~~~~~stw~v~f~~gkfg~p~kl~d 452 (912)
T TIGR02171 395 PVENAAIPRWR----VLENGDTVIVYVSDASNNKDDATFAAYSTWQVPFANGKFGTPKKLFD 452 (912)
T ss_pred ecccccccceE----ecCCCCeEEEEEcCCCCCcchhhhhhcceEEEEecCCCCCCchhhhc
Confidence 2222 14443 46666554443 32211 1357888888887 4566654
No 248
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=97.28 E-value=0.0097 Score=63.99 Aligned_cols=193 Identities=15% Similarity=0.096 Sum_probs=111.3
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCc--cceeEEecCCeEEEEEeCCCCCCceEEEEECC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV--TASVEWAGNEALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~--~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
.+.+.++|||-++|.= .+|..++++|.+++-.-+..--... ...+.|+|-|..|.+.. .++..+||..+-
T Consensus 453 PVyg~sFsPd~rfLlS-----cSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas--~D~tArLWs~d~- 524 (707)
T KOG0263|consen 453 PVYGCSFSPDRRFLLS-----CSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATAS--HDQTARLWSTDH- 524 (707)
T ss_pred ceeeeeecccccceee-----ccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecC--CCceeeeeeccc-
Confidence 4567899999998763 3445678888888866543211111 23477888883323332 234446776543
Q ss_pred CCCCCcEEEEeecCCCeEEE-EEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccccee-eeEeecCCEEEEEe
Q 006375 160 ADQSNDICLYHEKDDIYSLG-LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITR 237 (648)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~-~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~ 237 (648)
. ....+|..+-.. ++ +.+.|+..|++-. ..+.-+.++|..++...+..+....-+. ..+||+|++|+-.
T Consensus 525 -~--~PlRifaghlsD--V~cv~FHPNs~Y~aTG---SsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg- 595 (707)
T KOG0263|consen 525 -N--KPLRIFAGHLSD--VDCVSFHPNSNYVATG---SSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASG- 595 (707)
T ss_pred -C--Cchhhhcccccc--cceEEECCcccccccC---CCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeec-
Confidence 2 345566543211 22 4689999888633 3345677888888873344444333333 4599999876433
Q ss_pred ccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 238 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
+..+.|.+.|+.++.....+..|.. .+-++++..++-++.+. .+...+.+|++.
T Consensus 596 ----~ed~~I~iWDl~~~~~v~~l~~Ht~--ti~SlsFS~dg~vLasg-g~DnsV~lWD~~ 649 (707)
T KOG0263|consen 596 ----DEDGLIKIWDLANGSLVKQLKGHTG--TIYSLSFSRDGNVLASG-GADNSVRLWDLT 649 (707)
T ss_pred ----ccCCcEEEEEcCCCcchhhhhcccC--ceeEEEEecCCCEEEec-CCCCeEEEEEch
Confidence 2336788888876332222555532 35566665554443332 334567788775
No 249
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.27 E-value=0.031 Score=53.87 Aligned_cols=131 Identities=11% Similarity=0.075 Sum_probs=86.0
Q ss_pred eEEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCC---CCCCCC-CchhHHHHHHCCCEEEEEccCCCCCCCh
Q 006375 376 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYE---ICNDPA-FNSSRLSLLDRGFIFAIAQIRGGGELGR 451 (648)
Q Consensus 376 ~~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~---~~~~~~-~~~~~~~l~~~G~~v~~~~~rG~g~~g~ 451 (648)
+++..+.+..|. |.+.+. + ++.++.|+||..|.-.- ++...- +.+.++.++++ ++|+-+|.+|.-.-..
T Consensus 22 ~~e~~V~T~~G~-v~V~V~---G--d~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp 94 (326)
T KOG2931|consen 22 CQEHDVETAHGV-VHVTVY---G--DPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAP 94 (326)
T ss_pred ceeeeecccccc-EEEEEe---c--CCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCc
Confidence 345555555664 665533 2 22346789999998211 111111 23456777777 9999999998653222
Q ss_pred hhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCc
Q 006375 452 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 519 (648)
Q Consensus 452 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~ 519 (648)
.+.. .....+++|+.+-+..+.+.-.. +-|.-+|.-+|+++-++.|..+|+++-++|+..+.
T Consensus 95 ~~p~----~y~yPsmd~LAd~l~~VL~~f~l--k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 95 SFPE----GYPYPSMDDLADMLPEVLDHFGL--KSVIGMGVGAGAYILARFALNHPERVLGLVLINCD 156 (326)
T ss_pred cCCC----CCCCCCHHHHHHHHHHHHHhcCc--ceEEEecccccHHHHHHHHhcChhheeEEEEEecC
Confidence 2211 11235677887777777665333 78999999999999999999999999999988764
No 250
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=97.25 E-value=0.012 Score=61.39 Aligned_cols=202 Identities=14% Similarity=0.132 Sum_probs=113.5
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee-ccccCccceeEEecCC--eEEEEEeCCCCCCceEEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGVTASVEWAGNE--ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~-~~~~~~~~~~~WspDg--~l~y~~~~~~~~~~~l~~~~ 157 (648)
-.+.++++.|.|.+||= |++..+|+||.++||.-+. ..+.+....++|.|.+ .++-+..... +.+.+
T Consensus 401 g~Vr~iSvdp~G~wlas-----GsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~-----~~ivn 470 (733)
T KOG0650|consen 401 GLVRSISVDPSGEWLAS-----GSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGEC-----VLIVN 470 (733)
T ss_pred CeEEEEEecCCcceeee-----cCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCc-----eEEeC
Confidence 45678899999999884 4445589999999998654 3455666679999997 5555443211 11211
Q ss_pred CCCC------CC-----------------------------CcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEE
Q 006375 158 LEAD------QS-----------------------------NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVF 202 (648)
Q Consensus 158 l~~~------~~-----------------------------~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~ 202 (648)
-.-+ .+ ....+.-. .+.-.-.+.|..+|.||+....+.....++
T Consensus 471 p~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~-~~k~i~~vtWHrkGDYlatV~~~~~~~~Vl 549 (733)
T KOG0650|consen 471 PIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIK-HPKSIRQVTWHRKGDYLATVMPDSGNKSVL 549 (733)
T ss_pred ccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEe-cCCccceeeeecCCceEEEeccCCCcceEE
Confidence 1000 00 00000000 111223578999999999888888888999
Q ss_pred EEECCCCCceeEeeeccccee-eeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEE
Q 006375 203 YLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLA 281 (648)
Q Consensus 203 ~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 281 (648)
+..|........+.....-+. ..|-|.--+|++.|.+ .|..+|+......+.+.+...-..-.++++.||.++
T Consensus 550 iHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~------~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli 623 (733)
T KOG0650|consen 550 IHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQR------SVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLI 623 (733)
T ss_pred EEecccccccCchhhcCCceeEEEecCCCceEEEEecc------ceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEE
Confidence 999877651111211111122 2355555556555544 466667754211111333332222223444557887
Q ss_pred EEEecCCeeEEEEEEcCCCCC
Q 006375 282 VYEREGGLQKITTYRLPAVGE 302 (648)
Q Consensus 282 ~~~~~~~~~~l~v~~~~~~g~ 302 (648)
+.... .++..++++...+
T Consensus 624 ~gs~d---~k~~WfDldlssk 641 (733)
T KOG0650|consen 624 LGSYD---KKMCWFDLDLSSK 641 (733)
T ss_pred EecCC---CeeEEEEcccCcc
Confidence 76654 4678888886443
No 251
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=97.24 E-value=0.0062 Score=60.75 Aligned_cols=190 Identities=17% Similarity=0.111 Sum_probs=102.3
Q ss_pred cEEEeeEEeCCC--CCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC---ccceeEEecCC-eEEEEEeCCCCCCceE
Q 006375 80 FYSVGCFQVSPD--NKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKA 153 (648)
Q Consensus 80 ~~~~~~~~~SPD--G~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~l 153 (648)
...++.+.|+|. +.-||= ...+| .+.+|++++..++.+ +.+ ..+.++|.|+| .|.-.++|..+
T Consensus 217 ~~~v~~~~fhP~~~~~~lat-~s~Dg----tvklw~~~~e~~l~~-l~gH~~RVs~VafHPsG~~L~TasfD~tW----- 285 (459)
T KOG0272|consen 217 TSRVGAAVFHPVDSDLNLAT-ASADG----TVKLWKLSQETPLQD-LEGHLARVSRVAFHPSGKFLGTASFDSTW----- 285 (459)
T ss_pred ccceeeEEEccCCCccceee-eccCC----ceeeeccCCCcchhh-hhcchhhheeeeecCCCceeeecccccch-----
Confidence 456788999998 445543 23334 688889887666543 222 24569999999 66555555443
Q ss_pred EEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEee-ecccc-eeeeEeecCC
Q 006375 154 WLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVG-VDTAASHRGN 231 (648)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~-~~~~~-~~~~~s~dg~ 231 (648)
.++|+.++ .+++..+....-..+++|.+||..++ +..-....+ ++|+.++. -..+. ..... ....|||+|-
T Consensus 286 RlWD~~tk---~ElL~QEGHs~~v~~iaf~~DGSL~~-tGGlD~~~R--vWDlRtgr-~im~L~gH~k~I~~V~fsPNGy 358 (459)
T KOG0272|consen 286 RLWDLETK---SELLLQEGHSKGVFSIAFQPDGSLAA-TGGLDSLGR--VWDLRTGR-CIMFLAGHIKEILSVAFSPNGY 358 (459)
T ss_pred hhcccccc---hhhHhhcccccccceeEecCCCceee-ccCccchhh--eeecccCc-EEEEecccccceeeEeECCCce
Confidence 34567776 33455555444455889999997554 222222234 56888876 33322 22222 3356999996
Q ss_pred EEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCC-cccceEEEeCCEEEEEEecCCeeEEE
Q 006375 232 HFFITRRSDELFNSELLACPVDNTSETTVLIPHRES-VKLQDIQLFIDHLAVYEREGGLQKIT 293 (648)
Q Consensus 232 ~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~l~ 293 (648)
.|+--+.+ ...-+.|+..-.... ++|...+ +.-.-+++..+..++...-+..-+||
T Consensus 359 ~lATgs~D-----nt~kVWDLR~r~~ly-~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiW 415 (459)
T KOG0272|consen 359 HLATGSSD-----NTCKVWDLRMRSELY-TIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIW 415 (459)
T ss_pred EEeecCCC-----CcEEEeeecccccce-ecccccchhhheEecccCCeEEEEcccCcceeee
Confidence 65433332 233444554422222 4553333 22223344334444455444433333
No 252
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=97.20 E-value=0.016 Score=59.91 Aligned_cols=204 Identities=11% Similarity=0.081 Sum_probs=116.3
Q ss_pred EEEecccccCCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee-ccccCc-cceeEEecCC-eEEEEE
Q 006375 67 LILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGV-TASVEWAGNE-ALVYIT 143 (648)
Q Consensus 67 ~lld~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~-~~~~~~-~~~~~WspDg-~l~y~~ 143 (648)
.|+|..++.. --+.++.|||-+..|||-.....+--.++-++.+-+++.+. ..+.++ .-.+-|-..| +|.+-.
T Consensus 337 ~lld~Kslki----~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkv 412 (698)
T KOG2314|consen 337 MLLDKKSLKI----SGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKV 412 (698)
T ss_pred eeecccccCC----ccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEE
Confidence 3455444432 24678999999999999987766656788889988877653 234443 3458899999 776654
Q ss_pred eCC-CC------CCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccc--cEEEEEECCCCCceeE
Q 006375 144 MDE-IL------RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKIT--RFVFYLDVSKPEELRV 214 (648)
Q Consensus 144 ~~~-~~------~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~--~~l~~~dl~~~~~~~~ 214 (648)
.+- .. .+.++++++ .. +..+-...-....+.++|-|.|..+++.+..... -..|-+.....+ +.+
T Consensus 413 dR~tK~~~~g~f~n~eIfrir--eK---dIpve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~-~~l 486 (698)
T KOG2314|consen 413 DRHTKSKVKGQFSNLEIFRIR--EK---DIPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKK-PSL 486 (698)
T ss_pred EeeccccccceEeeEEEEEee--cc---CCCceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCc-hhh
Confidence 321 11 122344433 21 2211111111234567899999777766655433 345555543443 444
Q ss_pred eeec--ccceeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEE
Q 006375 215 LTPR--VVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYE 284 (648)
Q Consensus 215 l~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 284 (648)
+..- ......+|||.|+++++.+-. +.++.|.-+|.+-.... .+...++.....+.|++.+.|+..
T Consensus 487 Vk~~dk~~~N~vfwsPkG~fvvva~l~--s~~g~l~F~D~~~a~~k--~~~~~eh~~at~veWDPtGRYvvT 554 (698)
T KOG2314|consen 487 VKELDKKFANTVFWSPKGRFVVVAALV--SRRGDLEFYDTDYADLK--DTASPEHFAATEVEWDPTGRYVVT 554 (698)
T ss_pred hhhhcccccceEEEcCCCcEEEEEEec--ccccceEEEecchhhhh--hccCccccccccceECCCCCEEEE
Confidence 3321 122356799999988776654 35677888887631111 233333444455666665544443
No 253
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.19 E-value=0.0024 Score=68.23 Aligned_cols=131 Identities=13% Similarity=0.036 Sum_probs=77.7
Q ss_pred CeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCch----------------hHHHHHHCCCEEEEEcc-CCCCC
Q 006375 386 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS----------------SRLSLLDRGFIFAIAQI-RGGGE 448 (648)
Q Consensus 386 g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~----------------~~~~l~~~G~~v~~~~~-rG~g~ 448 (648)
+..+..|++..+.. ....|+||+++||+|.+...++-. .-..|.+. ..++.+|. +|.|.
T Consensus 60 ~~~lFyw~~~s~~~---~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~ 135 (462)
T PTZ00472 60 DKHYFYWAFGPRNG---NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGF 135 (462)
T ss_pred CceEEEEEEEcCCC---CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCc
Confidence 44577776654432 356799999999998764332110 11245544 45667775 56552
Q ss_pred -CChhhhhcccccCCCCcHhHHHHHHHHHHHc-CCCCCCeEEEEeeChhHHHHHHHHhh----CC------CceeEEEec
Q 006375 449 -LGRQWYENGKFLKKKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNM----RP------DLFKAAVAA 516 (648)
Q Consensus 449 -~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~----~p------~~~~a~v~~ 516 (648)
++.. . ..........+|+...++...++ ......++.|+|+||||..+-.++.+ .. =.++++++.
T Consensus 136 S~~~~-~--~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IG 212 (462)
T PTZ00472 136 SYADK-A--DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVG 212 (462)
T ss_pred ccCCC-C--CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEe
Confidence 2211 0 01111123557777777755443 33345799999999999977555443 11 147899999
Q ss_pred CCccccc
Q 006375 517 VPFVDVL 523 (648)
Q Consensus 517 ~~~~d~~ 523 (648)
.|++|..
T Consensus 213 Ng~~dp~ 219 (462)
T PTZ00472 213 NGLTDPY 219 (462)
T ss_pred ccccChh
Confidence 9988754
No 254
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=97.19 E-value=0.06 Score=50.69 Aligned_cols=100 Identities=12% Similarity=0.117 Sum_probs=61.4
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccC---ccceeEEecCC-eEEEEEeCCCCCCceEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWL 155 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~l~~ 155 (648)
..+.++.|+-||++||-.+. ...+.|++++.++.+.. ...+ ..-.+.|.|-. -++++...+ ..+.+
T Consensus 21 ~~v~Sv~wn~~g~~lasgs~-----dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~d----k~ir~ 91 (313)
T KOG1407|consen 21 QKVHSVAWNCDGTKLASGSF-----DKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGD----KTIRI 91 (313)
T ss_pred hcceEEEEcccCceeeeccc-----CCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCC----ceEEE
Confidence 35678899999999997654 23677778776644321 1111 23458899887 666665422 23667
Q ss_pred EECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEE
Q 006375 156 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIAS 193 (648)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~ 193 (648)
+++..+ +.....+..... +.+.|||||.++++..
T Consensus 92 wd~r~~--k~~~~i~~~~en--i~i~wsp~g~~~~~~~ 125 (313)
T KOG1407|consen 92 WDIRSG--KCTARIETKGEN--INITWSPDGEYIAVGN 125 (313)
T ss_pred EEeccC--cEEEEeeccCcc--eEEEEcCCCCEEEEec
Confidence 777665 222222222222 3568999999998754
No 255
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=97.18 E-value=0.048 Score=52.92 Aligned_cols=90 Identities=19% Similarity=0.190 Sum_probs=48.8
Q ss_pred eeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCC--EEEEEEecCCeeEEEEEEcCCCC
Q 006375 224 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVG 301 (648)
Q Consensus 224 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~l~v~~~~~~g 301 (648)
..||+|..++. +.| +..+| .|+..|+........++ ... .+..+.|++. ++++.. |.++++.+.+. |
T Consensus 324 lafs~Ds~y~a-Trn-d~~Pn-alW~Wdlq~l~l~avLi-Qk~--piraf~WdP~~prL~vct---g~srLY~W~ps--g 392 (447)
T KOG4497|consen 324 LAFSCDSTYAA-TRN-DKYPN-ALWLWDLQNLKLHAVLI-QKH--PIRAFEWDPGRPRLVVCT---GKSRLYFWAPS--G 392 (447)
T ss_pred eeecCCceEEe-eec-CCCCc-eEEEEechhhhhhhhhh-hcc--ceeEEEeCCCCceEEEEc---CCceEEEEcCC--C
Confidence 35888875332 223 34554 78999987633222222 222 3677888775 455443 55788888766 4
Q ss_pred CcccccCCCceeecCCCeeeeeCCCCccccc
Q 006375 302 EPLKSLQGGKSVEFIDPVYSIDPSESVFSSR 332 (648)
Q Consensus 302 ~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~ 332 (648)
- ..+..|.++++|..+.+.-.++
T Consensus 393 ~--------~~V~vP~~GF~i~~l~W~~~g~ 415 (447)
T KOG4497|consen 393 P--------RVVGVPKKGFNIQKLQWLQPGE 415 (447)
T ss_pred c--------eEEecCCCCceeeeEEecCCCc
Confidence 2 2344455555554444433333
No 256
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=97.15 E-value=0.024 Score=58.82 Aligned_cols=144 Identities=10% Similarity=0.108 Sum_probs=87.5
Q ss_pred eeEEeCCCCCEEEEEE----eCCCC---eEEEEEEEECCCCCee-eccccCccceeEEecCC-eEEEEEeCCCCCCceEE
Q 006375 84 GCFQVSPDNKLVAYAE----DTKGD---EIYTVYVIDIETGTPV-GKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAW 154 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~----~~~G~---e~~~l~v~dl~~g~~~-~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~ 154 (648)
-.+.|.+-|.-|.... |..|. ...+||+++.++...+ +..-.+....+.|+|+| .+..+- +-.+..+-
T Consensus 221 vqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~Vvy---GfMPAkvt 297 (566)
T KOG2315|consen 221 VQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVY---GFMPAKVT 297 (566)
T ss_pred eEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEE---ecccceEE
Confidence 4678999999777663 22221 1468999999844433 33445656679999999 554332 23456677
Q ss_pred EEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeee-ccccee-eeEeecCCE
Q 006375 155 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVD-TAASHRGNH 232 (648)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~-~~~~~~-~~~s~dg~~ 232 (648)
++++... .++.-+.... -.+.|+|.|++|++..-..-..++-++|..+.+ ++.. ...+.. +.|+|||++
T Consensus 298 ifnlr~~-----~v~df~egpR-N~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K---~i~~~~a~~tt~~eW~PdGe~ 368 (566)
T KOG2315|consen 298 IFNLRGK-----PVFDFPEGPR-NTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRK---LIAKFKAANTTVFEWSPDGEY 368 (566)
T ss_pred EEcCCCC-----EeEeCCCCCc-cceEECCCCCEEEEeecCCCCCceEEEeccchh---hccccccCCceEEEEcCCCcE
Confidence 8887764 3443332222 134689999999986432223445556766643 2322 223333 459999998
Q ss_pred EEEEecc
Q 006375 233 FFITRRS 239 (648)
Q Consensus 233 l~~~~~~ 239 (648)
|+..+..
T Consensus 369 flTATTa 375 (566)
T KOG2315|consen 369 FLTATTA 375 (566)
T ss_pred EEEEecc
Confidence 8777664
No 257
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.14 E-value=0.00059 Score=69.24 Aligned_cols=113 Identities=13% Similarity=0.110 Sum_probs=62.2
Q ss_pred CCCCcEEEEecCCCCCCCCCCCchh-HHHHHH---CCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHH
Q 006375 403 DGSDPLLLYGYGSYEICNDPAFNSS-RLSLLD---RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK 478 (648)
Q Consensus 403 ~~~~P~vl~~hGg~~~~~~~~~~~~-~~~l~~---~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 478 (648)
+.+.|+++++||-.+......+... ...++. +.+.|+++|...+... .+..+.... ...-..+...+..|..
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n~--~~vg~~la~~l~~L~~ 143 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVANT--RLVGRQLAKFLSFLIN 143 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhhH--HHHHHHHHHHHHHHHh
Confidence 4568999999995444423333333 344555 4899999998632221 122111110 0111344455667775
Q ss_pred cCCCCCCeEEEEeeChhHHHHHHHHhhCCC--ceeEEEecCCc
Q 006375 479 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAAVPF 519 (648)
Q Consensus 479 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~--~~~a~v~~~~~ 519 (648)
...+++++|-++|||+|+.+|+.+..+-.. ++..+...-|.
T Consensus 144 ~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPA 186 (331)
T PF00151_consen 144 NFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPA 186 (331)
T ss_dssp HH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B
T ss_pred hcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcc
Confidence 555889999999999999999999887665 56666666553
No 258
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.11 E-value=0.0028 Score=62.52 Aligned_cols=111 Identities=18% Similarity=0.155 Sum_probs=71.3
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHH---HCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHH----HHHHHHH
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLL---DRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIA----CAEYLIK 478 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~---~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~----~~~~l~~ 478 (648)
.++|+++.|.||... -|......|. ...+.|+++...|....... ... ....+..+++|.+. .++.++.
T Consensus 2 ~~li~~IPGNPGlv~--fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~-~~~-~~~~~~~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE--FYEEFLSALYEKLNPQFEILGISHAGHSTSPSN-SKF-SPNGRLFSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCChHH--HHHHHHHHHHHhCCCCCeeEEecCCCCcCCccc-ccc-cCCCCccCHHHHHHHHHHHHHHHhh
Confidence 468999999888532 1222233343 34899999999887644332 000 01233345555554 3333333
Q ss_pred cCCCCCCeEEEEeeChhHHHHHHHHhhCC---CceeEEEecCCcc
Q 006375 479 NCYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPFV 520 (648)
Q Consensus 479 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~~~a~v~~~~~~ 520 (648)
.......++.++|||.|+++++.++.+.+ ..+..+++..|.+
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 22114579999999999999999999998 5788888888864
No 259
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=97.11 E-value=0.065 Score=50.60 Aligned_cols=187 Identities=15% Similarity=0.124 Sum_probs=107.6
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
++-...++-|.++|. .|+....+.+||+++|+.+.. ..+.....+.|+++| .++++....-+....|..+++.
T Consensus 54 avW~~Did~~s~~li-----TGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~ 128 (327)
T KOG0643|consen 54 AVWCCDIDWDSKHLI-----TGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIR 128 (327)
T ss_pred eEEEEEecCCcceee-----eccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEcc
Confidence 455566666777654 255567899999999998854 334445568999999 8888777666667778888777
Q ss_pred CCC----CCc-EEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeee-cc--cc-eeeeEeecC
Q 006375 160 ADQ----SND-ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RV--VG-VDTAASHRG 230 (648)
Q Consensus 160 ~~~----~~~-~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~-~~--~~-~~~~~s~dg 230 (648)
... +++ .+....++.. ....-|+|-+++|+... ....|-.+|+.++. ..+.. .. .. .+..+|+|.
T Consensus 129 ~~~~~~~s~ep~~kI~t~~sk-it~a~Wg~l~~~ii~Gh---e~G~is~~da~~g~--~~v~s~~~h~~~Ind~q~s~d~ 202 (327)
T KOG0643|consen 129 DDSSDIDSEEPYLKIPTPDSK-ITSALWGPLGETIIAGH---EDGSISIYDARTGK--ELVDSDEEHSSKINDLQFSRDR 202 (327)
T ss_pred CChhhhcccCceEEecCCccc-eeeeeecccCCEEEEec---CCCcEEEEEcccCc--eeeechhhhccccccccccCCc
Confidence 432 122 3333333322 33567999999987532 33567888998875 22211 11 11 234588887
Q ss_pred CEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEe
Q 006375 231 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYER 285 (648)
Q Consensus 231 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 285 (648)
..+. +...+ .+.+| +|..+....+....+. .+.-..+.+..|++++..-
T Consensus 203 T~Fi-T~s~D--ttakl--~D~~tl~v~Kty~te~-PvN~aaisP~~d~VilgGG 251 (327)
T KOG0643|consen 203 TYFI-TGSKD--TTAKL--VDVRTLEVLKTYTTER-PVNTAAISPLLDHVILGGG 251 (327)
T ss_pred ceEE-ecccC--cccee--eeccceeeEEEeeecc-cccceecccccceEEecCC
Confidence 6433 32322 23344 3444432222222222 2223445566677766543
No 260
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=97.10 E-value=0.033 Score=59.07 Aligned_cols=158 Identities=13% Similarity=0.170 Sum_probs=91.3
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee--eccccC---ccceeEEecCC-eEEEEEeCCCCCCceE
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV--GKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKA 153 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~--~~~~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~l 153 (648)
...+....+||||++|||..-. +..||-+..+....+ .+..+- ......++-|+ .+++...+ ..+|
T Consensus 382 ~~nIs~~aiSPdg~~Ia~st~~----~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~----~~~l 453 (691)
T KOG2048|consen 382 KENISCAAISPDGNLIAISTVS----RTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKN----IFSL 453 (691)
T ss_pred ccceeeeccCCCCCEEEEeecc----ceEEEEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEecc----ccee
Confidence 4567788999999999998632 234444444331111 111111 13457889999 88777622 2446
Q ss_pred EEEECCCCCCCcEEEEeec-CCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc--ceeeeEeec-
Q 006375 154 WLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV--GVDTAASHR- 229 (648)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~--~~~~~~s~d- 229 (648)
....+.++..+...-.... .......+..|+||.||++.+ +...|+++++++.+ .+.+..+.. .....++|.
T Consensus 454 e~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~---t~g~I~v~nl~~~~-~~~l~~rln~~vTa~~~~~~~ 529 (691)
T KOG2048|consen 454 EEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAIS---TRGQIFVYNLETLE-SHLLKVRLNIDVTAAAFSPFV 529 (691)
T ss_pred EEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEe---ccceEEEEEcccce-eecchhccCcceeeeeccccc
Confidence 6667776643333222221 223344677899999999765 45789999999987 555543332 222335533
Q ss_pred CCEEEEEeccCCCCCcEEEEEeCCC
Q 006375 230 GNHFFITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 230 g~~l~~~~~~~~~~~~~l~~~~~~~ 254 (648)
-..|++.+.. .+++..|++.
T Consensus 530 ~~~lvvats~-----nQv~efdi~~ 549 (691)
T KOG2048|consen 530 RNRLVVATSN-----NQVFEFDIEA 549 (691)
T ss_pred cCcEEEEecC-----CeEEEEecch
Confidence 3445444332 3677777743
No 261
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.10 E-value=0.014 Score=64.98 Aligned_cols=205 Identities=15% Similarity=0.060 Sum_probs=101.1
Q ss_pred CCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCC----C----Ceee------ccccCccceeEEecCC-eEEEE
Q 006375 78 RGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET----G----TPVG------KPLVGVTASVEWAGNE-ALVYI 142 (648)
Q Consensus 78 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~----g----~~~~------~~~~~~~~~~~WspDg-~l~y~ 142 (648)
|...++..+.++|||.++|=.-.. . ...+.||+.+. . +.++ ..-.+....+.||||| +|+..
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~--~-d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsG 87 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQV--L-DGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASG 87 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCcc--c-cccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeec
Confidence 444567788999999987733211 1 11222554331 0 0011 1112334558899999 77654
Q ss_pred EeCCCCCCceEEEEEC-C------C-CCC------CcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCC
Q 006375 143 TMDEILRPDKAWLHKL-E------A-DQS------NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 208 (648)
Q Consensus 143 ~~~~~~~~~~l~~~~l-~------~-~~~------~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~ 208 (648)
+.| +.-.||...- + + +.. +...++..++ .-..++.||||+++++-.+ -++.|.+++..+
T Consensus 88 SDD---~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~-~DV~Dv~Wsp~~~~lvS~s---~DnsViiwn~~t 160 (942)
T KOG0973|consen 88 SDD---RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHD-SDVLDVNWSPDDSLLVSVS---LDNSVIIWNAKT 160 (942)
T ss_pred cCc---ceEEEeeecccCCcccccccccccccceeeEEEEEecCC-CccceeccCCCccEEEEec---ccceEEEEcccc
Confidence 432 2333454441 1 1 000 0123444443 3345789999999887433 346688888877
Q ss_pred CCceeEeeecccce-eeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCC-------CcccceEEEeCCEE
Q 006375 209 PEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE-------SVKLQDIQLFIDHL 280 (648)
Q Consensus 209 ~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l 280 (648)
.+..+.+.....-+ -..|+|-|++|+-.+++ ...++++ ..+.+..+ .+.... ...-.+|+++++++
T Consensus 161 F~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdD---rtikvwr--t~dw~i~k-~It~pf~~~~~~T~f~RlSWSPDG~~l 234 (942)
T KOG0973|consen 161 FELLKVLRGHQSLVKGVSWDPIGKYFASQSDD---RTLKVWR--TSDWGIEK-SITKPFEESPLTTFFLRLSWSPDGHHL 234 (942)
T ss_pred ceeeeeeecccccccceEECCccCeeeeecCC---ceEEEEE--cccceeeE-eeccchhhCCCcceeeecccCCCcCee
Confidence 64222222222111 24599999977666554 1234554 32222222 122111 11123455566666
Q ss_pred EEEE-ecCCeeEEEEEEcC
Q 006375 281 AVYE-REGGLQKITTYRLP 298 (648)
Q Consensus 281 ~~~~-~~~~~~~l~v~~~~ 298 (648)
+... .+++.+.+.+++.+
T Consensus 235 as~nA~n~~~~~~~IieR~ 253 (942)
T KOG0973|consen 235 ASPNAVNGGKSTIAIIERG 253 (942)
T ss_pred cchhhccCCcceeEEEecC
Confidence 4432 23445566666554
No 262
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.08 E-value=0.0066 Score=59.04 Aligned_cols=236 Identities=14% Similarity=0.196 Sum_probs=116.0
Q ss_pred EeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCC---CCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcc
Q 006375 381 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEI---CNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 457 (648)
Q Consensus 381 ~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~---~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~ 457 (648)
+++.-| .|.+.+. + +++++.|+||..|--.-. +...-|...........++++=+|.+|..+-......
T Consensus 4 v~t~~G-~v~V~v~---G--~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~-- 75 (283)
T PF03096_consen 4 VETPYG-SVHVTVQ---G--DPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPE-- 75 (283)
T ss_dssp EEETTE-EEEEEEE---S--S--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----T--
T ss_pred eccCce-EEEEEEE---e--cCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccc--
Confidence 334445 3555533 2 233468999999972111 1111122222333445799999999998763333321
Q ss_pred cccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccc------ccccccC-CC
Q 006375 458 KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD------VLTTMLD-PT 530 (648)
Q Consensus 458 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d------~~~~~~~-~~ 530 (648)
.....+++++.+.+..+.+.-.+ +.+..+|.-+|+++-+..|..+|+++-++|+..|... +...-+. ..
T Consensus 76 --~y~yPsmd~LAe~l~~Vl~~f~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~ 151 (283)
T PF03096_consen 76 --GYQYPSMDQLAEMLPEVLDHFGL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWL 151 (283)
T ss_dssp --T-----HHHHHCTHHHHHHHHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH---
T ss_pred --cccccCHHHHHHHHHHHHHhCCc--cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccc
Confidence 11234667777666666655333 6799999999999999999999999999999887543 2211000 00
Q ss_pred CC---CC--cccc---cccCCC---CCHH-----------------HHHHHHcC---Ccc-ccCCCCCCCeEEEeecCCC
Q 006375 531 IP---LT--TAEW---EEWGDP---WKEE-----------------FYFYMKSY---SPV-DNVKAQNYPHILVTAGLND 578 (648)
Q Consensus 531 ~~---~~--~~~~---~~~g~~---~~~~-----------------~~~~~~~~---sp~-~~~~~~~~P~~li~~g~~D 578 (648)
+. .+ ..++ ..||.. .+.+ ...++.+| ..+ ...+...+| +|++.|++-
T Consensus 152 L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~-vLlvvG~~S 230 (283)
T PF03096_consen 152 LYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCP-VLLVVGDNS 230 (283)
T ss_dssp ----CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS--EEEEEETTS
T ss_pred ccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCC-eEEEEecCC
Confidence 00 00 0010 112211 0111 11122222 112 123334788 999999998
Q ss_pred CccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCCCchHHHHHHHHHHHHHHHHhcCC
Q 006375 579 PRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 639 (648)
Q Consensus 579 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 639 (648)
+. ..++.++..+|... +--+++.+ ++|=.. ..++-..++..+.+|.+-+|.
T Consensus 231 p~--~~~vv~~ns~Ldp~----~ttllkv~-dcGglV---~eEqP~klaea~~lFlQG~G~ 281 (283)
T PF03096_consen 231 PH--VDDVVEMNSKLDPT----KTTLLKVA-DCGGLV---LEEQPGKLAEAFKLFLQGMGY 281 (283)
T ss_dssp TT--HHHHHHHHHHS-CC----CEEEEEET-T-TT-H---HHH-HHHHHHHHHHHHHHTTB
T ss_pred cc--hhhHHHHHhhcCcc----cceEEEec-ccCCcc---cccCcHHHHHHHHHHHccCCc
Confidence 76 45778888888543 23455544 565432 344455666778888887764
No 263
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=97.07 E-value=0.015 Score=59.49 Aligned_cols=163 Identities=14% Similarity=0.135 Sum_probs=93.9
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee-e----cccc--Cc-cceeEEecCC-eEEEEEeCCCCCC
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-G----KPLV--GV-TASVEWAGNE-ALVYITMDEILRP 150 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~-~----~~~~--~~-~~~~~WspDg-~l~y~~~~~~~~~ 150 (648)
.+.+..-.|.|+.+-...+...+| ++++||+..-+.. . .... .+ ....+|++|| .|+-...+ ..
T Consensus 268 ia~lt~g~whP~~k~~FlT~s~Dg----tlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~D---GS 340 (641)
T KOG0772|consen 268 IAELTCGCWHPDNKEEFLTCSYDG----TLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLD---GS 340 (641)
T ss_pred eeeeeccccccCcccceEEecCCC----cEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccC---Cc
Confidence 467788899999998877777666 7888898754321 1 1111 12 4568899999 65543332 23
Q ss_pred ceEEEEECCCCCCCcEEEEe-ecCC-CeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCce----eEeeecccceee
Q 006375 151 DKAWLHKLEADQSNDICLYH-EKDD-IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL----RVLTPRVVGVDT 224 (648)
Q Consensus 151 ~~l~~~~l~~~~~~~~~~~~-~~~~-~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~----~~l~~~~~~~~~ 224 (648)
-|+| +.++-.......+. .+.+ .-...+.+|.||++|+ ++..+..|-++||...+++ .-|.......+.
T Consensus 341 IQ~W--~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~Ll---SRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc 415 (641)
T KOG0772|consen 341 IQIW--DKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLL---SRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDC 415 (641)
T ss_pred eeee--ecCCcccccceEeeeccCCCCceeEEEeccccchhh---hccCCCceeeeeccccccchhhhcCCCccCCCCcc
Confidence 3444 43433222222222 2222 2344688999999987 4555667888898876511 112222334456
Q ss_pred eEeecCCEEEEEeccC-CCCCcEEEEEeCCC
Q 006375 225 AASHRGNHFFITRRSD-ELFNSELLACPVDN 254 (648)
Q Consensus 225 ~~s~dg~~l~~~~~~~-~~~~~~l~~~~~~~ 254 (648)
-||||.+.|+--+... +.....|+.+|.-+
T Consensus 416 ~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t 446 (641)
T KOG0772|consen 416 CFSPDDKLILTGTSAPNGMTAGTLFFFDRMT 446 (641)
T ss_pred ccCCCceEEEecccccCCCCCceEEEEeccc
Confidence 6999987554333321 22234677777544
No 264
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=97.06 E-value=0.028 Score=61.70 Aligned_cols=166 Identities=14% Similarity=0.056 Sum_probs=99.7
Q ss_pred CceEEEecccccCCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee--ccccCccceeEEecCC-eEE
Q 006375 64 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG--KPLVGVTASVEWAGNE-ALV 140 (648)
Q Consensus 64 ~~~~lld~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~--~~~~~~~~~~~WspDg-~l~ 140 (648)
.+..+|+.-++ .+....+|-+|+++|..++ .+.|.++++.+..... ....+....+.+.|.+ -|+
T Consensus 87 ~~~~iL~Rftl-------p~r~~~v~g~g~~iaagsd-----D~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLA 154 (933)
T KOG1274|consen 87 EEDTILARFTL-------PIRDLAVSGSGKMIAAGSD-----DTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLA 154 (933)
T ss_pred Cccceeeeeec-------cceEEEEecCCcEEEeecC-----ceeEEEEeccccchheeecccCCceeeeeEcCCCCEEE
Confidence 44556665544 4567899999999998654 5789999987754332 2334445668999999 665
Q ss_pred EEEeCCCCCCceEEEEECCCCCCCcEE--EE---eecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEe
Q 006375 141 YITMDEILRPDKAWLHKLEADQSNDIC--LY---HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL 215 (648)
Q Consensus 141 y~~~~~~~~~~~l~~~~l~~~~~~~~~--~~---~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l 215 (648)
....+ ..|+.+++.++.-...+ +. +..+.+....++|+|+|..+++-.. .+.|-+++..+.+..-.+
T Consensus 155 vss~d-----G~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~---d~~Vkvy~r~~we~~f~L 226 (933)
T KOG1274|consen 155 VSSCD-----GKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPV---DNTVKVYSRKGWELQFKL 226 (933)
T ss_pred EEecC-----ceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeecc---CCeEEEEccCCceeheee
Confidence 55543 34888888765221111 10 1111234456899999655555433 345677777665411122
Q ss_pred eecc--c-ceeeeEeecCCEEEEEeccCCCCCcEEEEEeCCC
Q 006375 216 TPRV--V-GVDTAASHRGNHFFITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 216 ~~~~--~-~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 254 (648)
.... . -....|||.|++|+-.+-. .+|.+.|+++
T Consensus 227 r~~~~ss~~~~~~wsPnG~YiAAs~~~-----g~I~vWnv~t 263 (933)
T KOG1274|consen 227 RDKLSSSKFSDLQWSPNGKYIAASTLD-----GQILVWNVDT 263 (933)
T ss_pred cccccccceEEEEEcCCCcEEeeeccC-----CcEEEEeccc
Confidence 2211 1 1234699999988766543 4677888764
No 265
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=97.03 E-value=0.019 Score=58.66 Aligned_cols=175 Identities=13% Similarity=0.144 Sum_probs=100.6
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccC---ccceeEEecCCeEEEEEeCCCCCCceEEEEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG---VTASVEWAGNEALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~---~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~ 157 (648)
-+....++|||+.|.. |+|..+|-||||++...+.. .+.. ....++-|||..+.|....+.+ |..+|
T Consensus 467 yiRSckL~pdgrtLiv-----GGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGn----I~vwD 537 (705)
T KOG0639|consen 467 YIRSCKLLPDGRTLIV-----GGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGN----IAVWD 537 (705)
T ss_pred ceeeeEecCCCceEEe-----ccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCc----EEEEE
Confidence 4678899999999875 55688999999998766532 1221 2344888999988888774432 66667
Q ss_pred CCCCCCCcEEEEeec-CCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeec-ccc--eeeeEeecCCEE
Q 006375 158 LEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-VVG--VDTAASHRGNHF 233 (648)
Q Consensus 158 l~~~~~~~~~~~~~~-~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~-~~~--~~~~~s~dg~~l 233 (648)
|... .-..-|... |..- -+..|+||..|.- .+-++-+.-+|+..+. .+... ..- +....+|.|+||
T Consensus 538 Lhnq--~~VrqfqGhtDGas--cIdis~dGtklWT---GGlDntvRcWDlregr---qlqqhdF~SQIfSLg~cP~~dWl 607 (705)
T KOG0639|consen 538 LHNQ--TLVRQFQGHTDGAS--CIDISKDGTKLWT---GGLDNTVRCWDLREGR---QLQQHDFSSQIFSLGYCPTGDWL 607 (705)
T ss_pred cccc--eeeecccCCCCCce--eEEecCCCceeec---CCCccceeehhhhhhh---hhhhhhhhhhheecccCCCccce
Confidence 7543 112222222 2222 3467899988752 2334677888887764 22221 111 223467899998
Q ss_pred EEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEE
Q 006375 234 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLA 281 (648)
Q Consensus 234 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 281 (648)
++--. +..+.+....++.+.+ +.-+...+.-.-|+.++.+.+
T Consensus 608 avGMe-----ns~vevlh~skp~kyq-lhlheScVLSlKFa~cGkwfv 649 (705)
T KOG0639|consen 608 AVGME-----NSNVEVLHTSKPEKYQ-LHLHESCVLSLKFAYCGKWFV 649 (705)
T ss_pred eeecc-----cCcEEEEecCCcccee-ecccccEEEEEEecccCceee
Confidence 76533 2345555555543332 332332322233445555543
No 266
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=97.03 E-value=0.0012 Score=43.62 Aligned_cols=28 Identities=25% Similarity=0.529 Sum_probs=21.2
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEE
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYV 111 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v 111 (648)
..+.|||||++|+|++++.+....+||+
T Consensus 12 ~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 12 GSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp EEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred cCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 5789999999999999988222577875
No 267
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=97.01 E-value=0.0035 Score=60.09 Aligned_cols=97 Identities=20% Similarity=0.324 Sum_probs=61.8
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec----cccCccceeEEecCC-eEEEEEeCCCCCCceEEEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK----PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~----~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~ 156 (648)
.+-.+.+|.|...||- |+....|.||.+.+|.-+.. ...++. .+.||.|+ .|+-.+.| ..+..|
T Consensus 265 aVlci~FSRDsEMlAs-----GsqDGkIKvWri~tG~ClRrFdrAHtkGvt-~l~FSrD~SqiLS~sfD-----~tvRiH 333 (508)
T KOG0275|consen 265 AVLCISFSRDSEMLAS-----GSQDGKIKVWRIETGQCLRRFDRAHTKGVT-CLSFSRDNSQILSASFD-----QTVRIH 333 (508)
T ss_pred ceEEEeecccHHHhhc-----cCcCCcEEEEEEecchHHHHhhhhhccCee-EEEEccCcchhhccccc-----ceEEEe
Confidence 3456788999888874 33345899999999975421 123333 48999999 77654443 346777
Q ss_pred ECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEE
Q 006375 157 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIA 192 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~ 192 (648)
-+.++ +-..-|..+ ..|.....+++||.+|+-.
T Consensus 334 GlKSG--K~LKEfrGH-sSyvn~a~ft~dG~~iisa 366 (508)
T KOG0275|consen 334 GLKSG--KCLKEFRGH-SSYVNEATFTDDGHHIISA 366 (508)
T ss_pred ccccc--hhHHHhcCc-cccccceEEcCCCCeEEEe
Confidence 77776 222223222 3455567788999887643
No 268
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.01 E-value=0.39 Score=46.88 Aligned_cols=196 Identities=15% Similarity=0.112 Sum_probs=104.4
Q ss_pred eeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeC-CCCcEEEEEEccccccEEEEEECC
Q 006375 130 SVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQAS-ESKKFLFIASESKITRFVFYLDVS 207 (648)
Q Consensus 130 ~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s-~Dg~~l~~~~~~~~~~~l~~~dl~ 207 (648)
++.|.++. .||++-.. ..+|++++..++ ...++.... ..+.... +||+.++. .. ..+.++|..
T Consensus 4 gp~~d~~~g~l~~~D~~----~~~i~~~~~~~~---~~~~~~~~~---~~G~~~~~~~g~l~v~-~~----~~~~~~d~~ 68 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIP----GGRIYRVDPDTG---EVEVIDLPG---PNGMAFDRPDGRLYVA-DS----GGIAVVDPD 68 (246)
T ss_dssp EEEEETTTTEEEEEETT----TTEEEEEETTTT---EEEEEESSS---EEEEEEECTTSEEEEE-ET----TCEEEEETT
T ss_pred ceEEECCCCEEEEEEcC----CCEEEEEECCCC---eEEEEecCC---CceEEEEccCCEEEEE-Ec----CceEEEecC
Confidence 48999854 88887432 357999998876 233343332 3355555 77665543 22 234556988
Q ss_pred CCCceeEeeecc----cc---eeeeEeecCCEEEEEeccCCC--CC--cEEEEEeCCCCCcceeEecCCCCcccceEEEe
Q 006375 208 KPEELRVLTPRV----VG---VDTAASHRGNHFFITRRSDEL--FN--SELLACPVDNTSETTVLIPHRESVKLQDIQLF 276 (648)
Q Consensus 208 ~~~~~~~l~~~~----~~---~~~~~s~dg~~l~~~~~~~~~--~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (648)
+++ .+.+.... .. .+..++++|+ ||+....... .. .+|++++.+. ..+.+... . ....++.++
T Consensus 69 ~g~-~~~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~~--~~~~~~~~-~-~~pNGi~~s 142 (246)
T PF08450_consen 69 TGK-VTVLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPDG--KVTVVADG-L-GFPNGIAFS 142 (246)
T ss_dssp TTE-EEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETTS--EEEEEEEE-E-SSEEEEEEE
T ss_pred CCc-EEEEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCCC--eEEEEecC-c-ccccceEEC
Confidence 886 55554331 11 2345888887 8887654221 11 6799999872 22223222 1 124456666
Q ss_pred CC--EEEEEEecCCeeEEEEEEcCCCCCcccccCCCc-eeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECC
Q 006375 277 ID--HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGK-SVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMD 353 (648)
Q Consensus 277 ~~--~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~-~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~ 353 (648)
++ .+++... ...+|+.++++..+..+. ..+ -+.++.......++..+.+++ |++... ....++++++.
T Consensus 143 ~dg~~lyv~ds--~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~g~pDG~~vD~~G~-l~va~~---~~~~I~~~~p~ 213 (246)
T PF08450_consen 143 PDGKTLYVADS--FNGRIWRFDLDADGGELS---NRRVFIDFPGGPGYPDGLAVDSDGN-LWVADW---GGGRIVVFDPD 213 (246)
T ss_dssp TTSSEEEEEET--TTTEEEEEEEETTTCCEE---EEEEEEE-SSSSCEEEEEEEBTTS--EEEEEE---TTTEEEEEETT
T ss_pred Ccchheeeccc--ccceeEEEecccccccee---eeeeEEEcCCCCcCCCcceEcCCCC-EEEEEc---CCCEEEEECCC
Confidence 54 5554443 345688888875443221 011 122222211122345556665 444433 55789999997
Q ss_pred CCc
Q 006375 354 MGI 356 (648)
Q Consensus 354 ~~~ 356 (648)
|+
T Consensus 214 -G~ 215 (246)
T PF08450_consen 214 -GK 215 (246)
T ss_dssp -SC
T ss_pred -cc
Confidence 66
No 269
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=97.01 E-value=0.098 Score=54.49 Aligned_cols=229 Identities=9% Similarity=0.029 Sum_probs=131.6
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC-ccceeEEecCC---eEEEEEeCCCCCCceEEEEECCC
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNE---ALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~-~~~~~~WspDg---~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
.++||+|..+.|..+. ..++++++.+-+.....+.. -.+.++.||-+ .+++-.-...+.+..|.++...-
T Consensus 130 ~~qfs~dEsl~arlv~------nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~ 203 (566)
T KOG2315|consen 130 VPQFSIDESLAARLVS------NEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPE 203 (566)
T ss_pred ccccccchhhhhhhhc------ceEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEecccc
Confidence 6899999999888763 37888888763322222222 13458888885 34332222345566666666542
Q ss_pred CCC----CcEEEEeecCCCeEEEEEeCCCCcEEEEEEccc---------cccEEEEEECCCCCceeEeeecccceeeeEe
Q 006375 161 DQS----NDICLYHEKDDIYSLGLQASESKKFLFIASESK---------ITRFVFYLDVSKPEELRVLTPRVVGVDTAAS 227 (648)
Q Consensus 161 ~~~----~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~---------~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s 227 (648)
... ..+..| ..| -+...|.+-|.-|++.+.+. +.+.||++++++.+....|.....-.++.|+
T Consensus 204 ~~~~~~~a~ksFF-kad---kvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~ 279 (566)
T KOG2315|consen 204 EGQHQPVANKSFF-KAD---KVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWS 279 (566)
T ss_pred ccccchhhhcccc-ccc---eeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEEC
Confidence 111 011111 111 23567999888777654321 3478999999843322333333334567799
Q ss_pred ecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCccccc
Q 006375 228 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSL 307 (648)
Q Consensus 228 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l 307 (648)
++|+.+.++-.- .-.++-..|++. ....-++++..- -.-+.+.++.+++..--+-...+.++++.. .+
T Consensus 280 ~s~~EF~VvyGf---MPAkvtifnlr~--~~v~df~egpRN-~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n--~K---- 347 (566)
T KOG2315|consen 280 PSGREFAVVYGF---MPAKVTIFNLRG--KPVFDFPEGPRN-TAFFNPHGNIILLAGFGNLPGDMEVWDVPN--RK---- 347 (566)
T ss_pred CCCCEEEEEEec---ccceEEEEcCCC--CEeEeCCCCCcc-ceEECCCCCEEEEeecCCCCCceEEEeccc--hh----
Confidence 999998887553 234677777764 222244444432 334677778888887777777899998873 21
Q ss_pred CCCceeecCCCeeeeeCCCCcccccEEEEEEee
Q 006375 308 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSS 340 (648)
Q Consensus 308 ~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss 340 (648)
.|.-+.... -....+.+|+..+.-..++
T Consensus 348 ----~i~~~~a~~-tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 348 ----LIAKFKAAN-TTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred ----hccccccCC-ceEEEEcCCCcEEEEEecc
Confidence 122111111 1125677888865544444
No 270
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.00 E-value=0.002 Score=60.93 Aligned_cols=89 Identities=13% Similarity=0.111 Sum_probs=49.5
Q ss_pred EEEecCCCCCCCCCCCchhHHHHHHCCCE---EEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCC
Q 006375 409 LLYGYGSYEICNDPAFNSSRLSLLDRGFI---FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 485 (648)
Q Consensus 409 vl~~hGg~~~~~~~~~~~~~~~l~~~G~~---v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 485 (648)
||++||-.+ .....|......|.++||. |...+|-..... ....... .......++.+.++.+.+. +..
T Consensus 4 VVlVHG~~~-~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~--~~~~~~~--~~~~~~~~l~~fI~~Vl~~--TGa- 75 (219)
T PF01674_consen 4 VVLVHGTGG-NAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGS--PSVQNAH--MSCESAKQLRAFIDAVLAY--TGA- 75 (219)
T ss_dssp EEEE--TTT-TTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHH--THHHHHH--B-HHHHHHHHHHHHHHHHH--HT--
T ss_pred EEEECCCCc-chhhCHHHHHHHHHHcCCCcceeEeccCCCCCCC--Ccccccc--cchhhHHHHHHHHHHHHHh--hCC-
Confidence 778899543 3445688888999999999 799988433321 1111000 1112234555666655542 556
Q ss_pred eEEEEeeChhHHHHHHHHhh
Q 006375 486 KLCIEGRSAGGLLIGAVLNM 505 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~~ 505 (648)
+|-|+||||||.++-+++..
T Consensus 76 kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp -EEEEEETCHHHHHHHHHHH
T ss_pred EEEEEEcCCcCHHHHHHHHH
Confidence 99999999999988777753
No 271
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.98 E-value=0.0011 Score=69.64 Aligned_cols=89 Identities=19% Similarity=0.245 Sum_probs=62.3
Q ss_pred CCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHH
Q 006375 422 PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 501 (648)
Q Consensus 422 ~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 501 (648)
..|...+..|.+.||.+ ..|.+|. |.+|+... .....++++...++.+.+.. ...++.++||||||.++..
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~---gYDwR~~~---~~~~~~~~Lk~lIe~~~~~~--g~~kV~LVGHSMGGlva~~ 178 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGF---GYDFRQSN---RLPETMDGLKKKLETVYKAS--GGKKVNIISHSMGGLLVKC 178 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccC---CCCccccc---cHHHHHHHHHHHHHHHHHHc--CCCCEEEEEECHhHHHHHH
Confidence 44667778899999977 6788864 45566421 11234677777777776542 2368999999999999999
Q ss_pred HHhhCCCc----eeEEEecCCc
Q 006375 502 VLNMRPDL----FKAAVAAVPF 519 (648)
Q Consensus 502 ~~~~~p~~----~~a~v~~~~~ 519 (648)
++.++|+. ++..|+.++.
T Consensus 179 fl~~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 179 FMSLHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred HHHHCCHhHHhHhccEEEECCC
Confidence 88888864 4666665543
No 272
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=96.96 E-value=0.16 Score=50.09 Aligned_cols=155 Identities=15% Similarity=0.143 Sum_probs=96.5
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-c-ccCccceeEEecCCeEEEEEeCCCCCCceEEEEE
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNEALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~-~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~ 157 (648)
.-++..++++|+.+++| + |++.-.-++|++.+|+..-. + -.+......||-||.++-+. +-..+|..+.
T Consensus 64 ~~svFavsl~P~~~l~a-T----GGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATG----dmsG~v~v~~ 134 (399)
T KOG0296|consen 64 TDSVFAVSLHPNNNLVA-T----GGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATG----DMSGKVLVFK 134 (399)
T ss_pred CCceEEEEeCCCCceEE-e----cCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEec----CCCccEEEEE
Confidence 34666788999776655 2 44456778999999985422 1 12234568999999665553 3345688888
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeec-ccceee-eEeecCCEEEE
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-VVGVDT-AASHRGNHFFI 235 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~-~~~~~~-~~s~dg~~l~~ 235 (648)
..++..+ ..++.+.. -.....|.|-+..|+..+. ...+|++.+..+. ..++..+ ...... .+.|||+.++-
T Consensus 135 ~stg~~~-~~~~~e~~--dieWl~WHp~a~illAG~~---DGsvWmw~ip~~~-~~kv~~Gh~~~ct~G~f~pdGKr~~t 207 (399)
T KOG0296|consen 135 VSTGGEQ-WKLDQEVE--DIEWLKWHPRAHILLAGST---DGSVWMWQIPSQA-LCKVMSGHNSPCTCGEFIPDGKRILT 207 (399)
T ss_pred cccCceE-EEeecccC--ceEEEEecccccEEEeecC---CCcEEEEECCCcc-eeeEecCCCCCcccccccCCCceEEE
Confidence 8887432 23332222 1235689998877765443 3568999888754 3444433 222332 38999998765
Q ss_pred EeccCCCCCcEEEEEeCCCC
Q 006375 236 TRRSDELFNSELLACPVDNT 255 (648)
Q Consensus 236 ~~~~~~~~~~~l~~~~~~~~ 255 (648)
... +..|.+.++++.
T Consensus 208 gy~-----dgti~~Wn~ktg 222 (399)
T KOG0296|consen 208 GYD-----DGTIIVWNPKTG 222 (399)
T ss_pred Eec-----CceEEEEecCCC
Confidence 544 246777888763
No 273
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.95 E-value=0.8 Score=49.56 Aligned_cols=200 Identities=14% Similarity=0.118 Sum_probs=121.3
Q ss_pred CCCCCEEEEEEeCCCCeEEEEEEEECCCCCe---e-ecc---ccC--c--cceeEEecCC-eEEEEEeCCCCCCceEEEE
Q 006375 89 SPDNKLVAYAEDTKGDEIYTVYVIDIETGTP---V-GKP---LVG--V--TASVEWAGNE-ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 89 SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~---~-~~~---~~~--~--~~~~~WspDg-~l~y~~~~~~~~~~~l~~~ 156 (648)
..+|.+--|.....|. .+-++..-+..|.. + .+. ..+ . .+.++-|||. .++|.......+.+.|...
T Consensus 82 ~~~~~~~Yy~r~~~g~-~y~~~~R~~~~g~~~eevlLD~n~~A~g~~f~~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~k 160 (682)
T COG1770 82 YRKGPYEYYSRTEEGK-EYPIYCRQPDEGGEGEEVLLDVNKEAEGHDFFSLGAASISPDHNLLAYSVDVLGDEQYTLRFK 160 (682)
T ss_pred cccCCeeEEEEecCCC-cceeEEeccCCCCCceeEeecchhccCcccceeeeeeeeCCCCceEEEEEecccccEEEEEEE
Confidence 4578887888777665 44566664444322 2 111 111 1 2457778999 8888887777888889999
Q ss_pred ECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEcccc--ccEEEEEECCCCC-ceeEeeecccc-ee--eeEeecC
Q 006375 157 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI--TRFVFYLDVSKPE-ELRVLTPRVVG-VD--TAASHRG 230 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~--~~~l~~~dl~~~~-~~~~l~~~~~~-~~--~~~s~dg 230 (648)
+|.+++.-...+ .....++.|.+|++.++++..... ...||...+.+.. .-+++....+. .. ..-+...
T Consensus 161 dL~tg~~~~d~i-----~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~gt~~~~d~lvyeE~d~~f~~~v~~s~s~ 235 (682)
T COG1770 161 DLATGEELPDEI-----TNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPGSSDELVYEEKDDRFFLSVGRSRSE 235 (682)
T ss_pred ecccccccchhh-----cccccceEEecCCCeEEEEEEcCCCCcceEEEEecCCCCCcceEEEEcCCCcEEEEeeeccCC
Confidence 998873211111 112335689999999999876543 4789999888843 23444433222 22 2245566
Q ss_pred CEEEEEeccCCCCCcEEEEEeCCCCCcceeE-ecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 231 NHFFITRRSDELFNSELLACPVDNTSETTVL-IPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 231 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
++|++..+. ....+++.++.+.++...++ .+...+.. =.+...+++.++..+.+| ....++...
T Consensus 236 ~yi~i~~~~--~~tsE~~ll~a~~p~~~p~vv~pr~~g~e-Y~~eh~~d~f~i~sN~~g-knf~l~~ap 300 (682)
T COG1770 236 AYIVISLGS--HITSEVRLLDADDPEAEPKVVLPRENGVE-YSVEHGGDRFYILSNADG-KNFKLVRAP 300 (682)
T ss_pred ceEEEEcCC--CcceeEEEEecCCCCCceEEEEEcCCCcE-EeeeecCcEEEEEecCCC-cceEEEEcc
Confidence 777776643 34568888888776554444 44333332 234555778888888888 444555544
No 274
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=96.93 E-value=0.13 Score=51.78 Aligned_cols=151 Identities=13% Similarity=0.147 Sum_probs=96.0
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecccc---Cc-cceeEEecCCeEEEEEeCCCCCCceEEEEEC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV---GV-TASVEWAGNEALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~---~~-~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l 158 (648)
+......|.|.|+..++++ ..+.+-|+.+|..+..... ++ ....++.|||-||-+.. ....|..+++
T Consensus 306 V~~ls~h~tgeYllsAs~d-----~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt----~d~~vkiwdl 376 (506)
T KOG0289|consen 306 VTGLSLHPTGEYLLSASND-----GTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGT----PDGVVKIWDL 376 (506)
T ss_pred ceeeeeccCCcEEEEecCC-----ceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccC----CCceEEEEEc
Confidence 5677889999999888763 2677788888886643221 22 56799999996654433 2345778888
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEee--ecccceeeeEeecCCEEEEE
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT--PRVVGVDTAASHRGNHFFIT 236 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~--~~~~~~~~~~s~dg~~l~~~ 236 (648)
.... ...-|..+... .-.+.++.+|-||+..+++ ..+.++||..-+.++.+. ...+-..+.++..|..|.+.
T Consensus 377 ks~~--~~a~Fpght~~-vk~i~FsENGY~Lat~add---~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~ 450 (506)
T KOG0289|consen 377 KSQT--NVAKFPGHTGP-VKAISFSENGYWLATAADD---GSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIA 450 (506)
T ss_pred CCcc--ccccCCCCCCc-eeEEEeccCceEEEEEecC---CeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEee
Confidence 7652 33344333222 3367899999998876553 338899997654222222 12223456788889887766
Q ss_pred eccCCCCCcEEEEEeCC
Q 006375 237 RRSDELFNSELLACPVD 253 (648)
Q Consensus 237 ~~~~~~~~~~l~~~~~~ 253 (648)
.+ ..++|.++-.
T Consensus 451 g~-----~l~Vy~~~k~ 462 (506)
T KOG0289|consen 451 GS-----DLQVYICKKK 462 (506)
T ss_pred cc-----eeEEEEEecc
Confidence 33 2577777643
No 275
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.92 E-value=0.0044 Score=66.03 Aligned_cols=140 Identities=14% Similarity=0.066 Sum_probs=76.6
Q ss_pred EEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCch-----------------hHHHHHHCCCEEEEEc
Q 006375 380 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-----------------SRLSLLDRGFIFAIAQ 442 (648)
Q Consensus 380 ~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~-----------------~~~~l~~~G~~v~~~~ 442 (648)
.+....+..+..|++..++ ...+.|+||++.||||.+....+-. ....|.+ -..++.+|
T Consensus 17 ~~~~~~~~~lfyw~~~s~~---~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l~iD 92 (415)
T PF00450_consen 17 PVNDNENAHLFYWFFESRN---DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLLFID 92 (415)
T ss_dssp EECTTTTEEEEEEEEE-SS---GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEEEE-
T ss_pred ecCCCCCcEEEEEEEEeCC---CCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc-ccceEEEe
Confidence 3444466778877554433 2456799999999998765432100 0124444 47889999
Q ss_pred cCCCCCCChhhhhcccccCCCCcHhHHHHHHHHH-HHcCCCCCCeEEEEeeChhHHHHH----HHHhhC------CCcee
Q 006375 443 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYL-IKNCYCTKEKLCIEGRSAGGLLIG----AVLNMR------PDLFK 511 (648)
Q Consensus 443 ~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l-~~~~~~d~~~i~i~G~S~GG~l~~----~~~~~~------p~~~~ 511 (648)
.+-+.|+...-........-....+|+..+++.. ...+......+.|+|.|+||..+- +++.+. +-.++
T Consensus 93 ~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLk 172 (415)
T PF00450_consen 93 QPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLK 172 (415)
T ss_dssp -STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEE
T ss_pred ecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccc
Confidence 7766666543222111111123345555555433 333444556999999999998543 333433 23488
Q ss_pred EEEecCCccccc
Q 006375 512 AAVAAVPFVDVL 523 (648)
Q Consensus 512 a~v~~~~~~d~~ 523 (648)
++++..|++|..
T Consensus 173 Gi~IGng~~dp~ 184 (415)
T PF00450_consen 173 GIAIGNGWIDPR 184 (415)
T ss_dssp EEEEESE-SBHH
T ss_pred cceecCcccccc
Confidence 999999998854
No 276
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.91 E-value=0.0039 Score=60.15 Aligned_cols=113 Identities=16% Similarity=0.199 Sum_probs=65.6
Q ss_pred CCCcEEEEecCCCCCCCCCCCchhHHHHHHCCC--EEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCC
Q 006375 404 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF--IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 481 (648)
Q Consensus 404 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~--~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 481 (648)
.+..++|++|| |...........++.....|+ .++.+..+..|.. ..|..+ ...-..+-.++...++.|.+.
T Consensus 16 ~~~~vlvfVHG-yn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~-~~Y~~d--~~~a~~s~~~l~~~L~~L~~~-- 89 (233)
T PF05990_consen 16 PDKEVLVFVHG-YNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSL-LGYFYD--RESARFSGPALARFLRDLARA-- 89 (233)
T ss_pred CCCeEEEEEeC-CCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCh-hhhhhh--hhhHHHHHHHHHHHHHHHHhc--
Confidence 34679999999 444332222222232223333 7888888866542 122211 111123446666667777665
Q ss_pred CCCCeEEEEeeChhHHHHHHHHhhC----C-----CceeEEEecCCcccc
Q 006375 482 CTKEKLCIEGRSAGGLLIGAVLNMR----P-----DLFKAAVAAVPFVDV 522 (648)
Q Consensus 482 ~d~~~i~i~G~S~GG~l~~~~~~~~----p-----~~~~a~v~~~~~~d~ 522 (648)
....+|-|++||||+.++..++.+- + ..|.-+|+.+|-+|.
T Consensus 90 ~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 90 PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 2348999999999999988776641 1 245666677765553
No 277
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.88 E-value=0.0013 Score=57.47 Aligned_cols=106 Identities=16% Similarity=0.212 Sum_probs=70.2
Q ss_pred HHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccccc---CCCCCCCcccccccCCC---
Q 006375 471 ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML---DPTIPLTTAEWEEWGDP--- 544 (648)
Q Consensus 471 ~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~---~~~~~~~~~~~~~~g~~--- 544 (648)
+--+|++++.. |.+..+.|.||||+.++....++|++|..+|+.+|+.|...+.. +... -|..|
T Consensus 89 AyerYv~eEal--pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yyddDv--------~ynsP~dy 158 (227)
T COG4947 89 AYERYVIEEAL--PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDDDV--------YYNSPSDY 158 (227)
T ss_pred HHHHHHHHhhc--CCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccCce--------eecChhhh
Confidence 34456666543 57789999999999999999999999999999999998654321 1110 01111
Q ss_pred ----CCHHHHHHHHcCCccccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCC
Q 006375 545 ----WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 600 (648)
Q Consensus 545 ----~~~~~~~~~~~~sp~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~ 600 (648)
.+|...+ .++++ .+.+.+|..|+..+ +..++-+.|.+.+++.
T Consensus 159 lpg~~dp~~l~---------rlr~~---~~vfc~G~e~~~L~--~~~~L~~~l~dKqipa 204 (227)
T COG4947 159 LPGLADPFRLE---------RLRRI---DMVFCIGDEDPFLD--NNQHLSRLLSDKQIPA 204 (227)
T ss_pred ccCCcChHHHH---------HHhhc---cEEEEecCcccccc--chHHHHHHhccccccH
Confidence 1221111 12222 47788899998755 4567777887766665
No 278
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=96.88 E-value=0.011 Score=64.76 Aligned_cols=116 Identities=13% Similarity=0.129 Sum_probs=73.4
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee---c------cc-cCccceeEEecCC-eEEEEEeCCCC
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG---K------PL-VGVTASVEWAGNE-ALVYITMDEIL 148 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~---~------~~-~~~~~~~~WspDg-~l~y~~~~~~~ 148 (648)
...+..+.++|.|++||.+. .+| +|+|||++++.... . .+ ..+...++|+||| .+++...+.
T Consensus 138 ~apVl~l~~~p~~~fLAvss-~dG----~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~-- 210 (933)
T KOG1274|consen 138 DAPVLQLSYDPKGNFLAVSS-CDG----KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDN-- 210 (933)
T ss_pred CCceeeeeEcCCCCEEEEEe-cCc----eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCC--
Confidence 35677899999999999875 345 79999999876431 1 11 1235669999998 777765432
Q ss_pred CCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCC
Q 006375 149 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 209 (648)
Q Consensus 149 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~ 209 (648)
.|..++..+-...-.+. ......-+..++|||.|+||+... -.+.|-++|.++-
T Consensus 211 ---~Vkvy~r~~we~~f~Lr-~~~~ss~~~~~~wsPnG~YiAAs~---~~g~I~vWnv~t~ 264 (933)
T KOG1274|consen 211 ---TVKVYSRKGWELQFKLR-DKLSSSKFSDLQWSPNGKYIAAST---LDGQILVWNVDTH 264 (933)
T ss_pred ---eEEEEccCCceeheeec-ccccccceEEEEEcCCCcEEeeec---cCCcEEEEecccc
Confidence 25555554442111111 111122255789999999997533 3467888887753
No 279
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=96.88 E-value=0.44 Score=45.49 Aligned_cols=198 Identities=13% Similarity=0.089 Sum_probs=112.5
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCC-----CeeeccccC---ccceeEEecCCeEEEEEeCCCCCCce
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG-----TPVGKPLVG---VTASVEWAGNEALVYITMDEILRPDK 152 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g-----~~~~~~~~~---~~~~~~WspDg~l~y~~~~~~~~~~~ 152 (648)
-.+..++..+++.-+.+..+++ ..+.++++... .++. .+.+ ....++-++||.++++.. ....
T Consensus 16 d~Vt~la~~~~~~~~l~sasrD----k~ii~W~L~~dd~~~G~~~r-~~~GHsH~v~dv~~s~dg~~alS~s----wD~~ 86 (315)
T KOG0279|consen 16 DWVTALAIKIKNSDILVSASRD----KTIIVWKLTSDDIKYGVPVR-RLTGHSHFVSDVVLSSDGNFALSAS----WDGT 86 (315)
T ss_pred ceEEEEEeecCCCceEEEcccc----eEEEEEEeccCccccCceee-eeeccceEecceEEccCCceEEecc----ccce
Confidence 4566778888888888887653 46778877543 2222 2222 245688999996666543 2345
Q ss_pred EEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeec-cccee-eeEeecC
Q 006375 153 AWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-VVGVD-TAASHRG 230 (648)
Q Consensus 153 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~-~~~~~-~~~s~dg 230 (648)
++++|+.++ +....|..+ ..-.+++++|+|.+.|+-. +. +.-|-+++.-+....+..... .+.+. ..|+|..
T Consensus 87 lrlWDl~~g--~~t~~f~GH-~~dVlsva~s~dn~qivSG--Sr-DkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~ 160 (315)
T KOG0279|consen 87 LRLWDLATG--ESTRRFVGH-TKDVLSVAFSTDNRQIVSG--SR-DKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNE 160 (315)
T ss_pred EEEEEecCC--cEEEEEEec-CCceEEEEecCCCceeecC--CC-cceeeeeeecccEEEEEecCCCcCcEEEEEEcCCC
Confidence 889999988 344555544 2345678999999998732 22 234556666554312211111 23344 3489987
Q ss_pred CEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 006375 231 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 299 (648)
Q Consensus 231 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~ 299 (648)
...++++... ...+-+.|+++.+..+-.+.+... +..+.+.+|+-...+ -+...++.+++++.
T Consensus 161 ~~p~Ivs~s~---DktvKvWnl~~~~l~~~~~gh~~~--v~t~~vSpDGslcas-Ggkdg~~~LwdL~~ 223 (315)
T KOG0279|consen 161 SNPIIVSASW---DKTVKVWNLRNCQLRTTFIGHSGY--VNTVTVSPDGSLCAS-GGKDGEAMLWDLNE 223 (315)
T ss_pred CCcEEEEccC---CceEEEEccCCcchhhcccccccc--EEEEEECCCCCEEec-CCCCceEEEEEccC
Confidence 6666666531 134556677664333324444443 344444444322222 11234788889984
No 280
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.87 E-value=0.23 Score=51.94 Aligned_cols=198 Identities=11% Similarity=0.053 Sum_probs=113.5
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc-cCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
-.+..++++|+++..... . ...|.++|.++........ ...-..++|+||+ .+|...... ....+...+-.+
T Consensus 76 p~~i~v~~~~~~vyv~~~-~---~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~--~~~~vsvid~~t 149 (381)
T COG3391 76 PAGVAVNPAGNKVYVTTG-D---SNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGN--GNNTVSVIDAAT 149 (381)
T ss_pred ccceeeCCCCCeEEEecC-C---CCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEeccc--CCceEEEEeCCC
Confidence 346788999997654432 2 2478999977766554322 2234569999999 665543321 345677777666
Q ss_pred CCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeE------eeecccceeeeEeecCCEEE
Q 006375 161 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV------LTPRVVGVDTAASHRGNHFF 234 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~------l~~~~~~~~~~~s~dg~~l~ 234 (648)
... ...++....+ .+..++|+|.++++.. ...+.|.++|.++.. ... +..........++++|..+|
T Consensus 150 ~~~-~~~~~vG~~P---~~~a~~p~g~~vyv~~--~~~~~v~vi~~~~~~-v~~~~~~~~~~~~~~P~~i~v~~~g~~~y 222 (381)
T COG3391 150 NKV-TATIPVGNTP---TGVAVDPDGNKVYVTN--SDDNTVSVIDTSGNS-VVRGSVGSLVGVGTGPAGIAVDPDGNRVY 222 (381)
T ss_pred CeE-EEEEecCCCc---ceEEECCCCCeEEEEe--cCCCeEEEEeCCCcc-eeccccccccccCCCCceEEECCCCCEEE
Confidence 522 1223332223 5678999999988754 556889999977765 332 11111112345899999877
Q ss_pred EEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccce--EEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 235 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQD--IQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
..-... ....+.++|........+..+.... ...+ +.+.+..+++... ....+.+++..
T Consensus 223 V~~~~~--~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~--~~~~V~vid~~ 283 (381)
T COG3391 223 VANDGS--GSNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANS--QGGTVSVIDGA 283 (381)
T ss_pred EEeccC--CCceEEEEeCCCceEEEeccccccC-CCCceeECCCCCEEEEEec--CCCeEEEEeCC
Confidence 665542 2357888887663222222232222 2333 4444444444433 34566666654
No 281
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=96.86 E-value=0.0057 Score=58.65 Aligned_cols=101 Identities=17% Similarity=0.209 Sum_probs=55.0
Q ss_pred cEEEEecCCCCCCCCCCCchhHHHH--------HHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHH
Q 006375 407 PLLLYGYGSYEICNDPAFNSSRLSL--------LDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK 478 (648)
Q Consensus 407 P~vl~~hGg~~~~~~~~~~~~~~~l--------~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 478 (648)
..||++||..|+... +......+ ....+.++..|+.... ..++ |.... ...+-+..+++++.+
T Consensus 5 ~pVlFIhG~~Gs~~q--~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~---s~~~--g~~l~--~q~~~~~~~i~~i~~ 75 (225)
T PF07819_consen 5 IPVLFIHGNAGSYKQ--VRSLASELQRKALLNDNSSHFDFFTVDFNEEL---SAFH--GRTLQ--RQAEFLAEAIKYILE 75 (225)
T ss_pred CEEEEECcCCCCHhH--HHHHHHHHhhhhhhccCccceeEEEeccCccc---cccc--cccHH--HHHHHHHHHHHHHHH
Confidence 469999995554221 11111111 1125778888876422 1111 00010 112344556666655
Q ss_pred cC---CCCCCeEEEEeeChhHHHHHHHHhhCC---CceeEEEec
Q 006375 479 NC---YCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAA 516 (648)
Q Consensus 479 ~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~~~a~v~~ 516 (648)
.. ...+.+|.++||||||.++-.++...+ +.++.+|..
T Consensus 76 ~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl 119 (225)
T PF07819_consen 76 LYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITL 119 (225)
T ss_pred hhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEE
Confidence 43 467899999999999988877776533 345555543
No 282
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=96.85 E-value=0.49 Score=45.53 Aligned_cols=197 Identities=13% Similarity=0.103 Sum_probs=105.4
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee-eccccCc-cceeEEecCC-eEEEEEeCCCCCCceEEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-GKPLVGV-TASVEWAGNE-ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~-~~~~~~~-~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~ 157 (648)
-.+..+.||+|.|+|.-++ .+| .+-|||.-|...+ ..+.+.. .-..+++|.| .++-...++ ...||...
T Consensus 56 ~Ki~~~~ws~Dsr~ivSaS-qDG----klIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN---~Csiy~ls 127 (343)
T KOG0286|consen 56 NKIYAMDWSTDSRRIVSAS-QDG----KLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDN---KCSIYPLS 127 (343)
T ss_pred cceeeeEecCCcCeEEeec-cCC----eEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCc---eeEEEecc
Confidence 3566789999999987544 445 7889998876543 3344443 3458899999 776655432 23455444
Q ss_pred CCCCCC--CcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccce-eeeEee-cCCEE
Q 006375 158 LEADQS--NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASH-RGNHF 233 (648)
Q Consensus 158 l~~~~~--~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~s~-dg~~l 233 (648)
...... .-...+.. ...|..-..+.+|+. |+- ..++...-++|+++++..+.+.....++ ...++| +++++
T Consensus 128 ~~d~~g~~~v~r~l~g-HtgylScC~f~dD~~-ilT---~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntF 202 (343)
T KOG0286|consen 128 TRDAEGNVRVSRELAG-HTGYLSCCRFLDDNH-ILT---GSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTF 202 (343)
T ss_pred cccccccceeeeeecC-ccceeEEEEEcCCCc-eEe---cCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeE
Confidence 321110 01111111 133444456677764 332 2244567788999987233333333333 345788 66643
Q ss_pred EEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEE-EEecCCeeEEEEEEcCC
Q 006375 234 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAV-YEREGGLQKITTYRLPA 299 (648)
Q Consensus 234 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~l~v~~~~~ 299 (648)
++.. -...-.+.|+..+...+ .++.. +..|.++.+++++-.+ ...+++.- ++|++..
T Consensus 203 --vSg~---cD~~aklWD~R~~~c~q-tF~gh-esDINsv~ffP~G~afatGSDD~tc--RlyDlRa 260 (343)
T KOG0286|consen 203 --VSGG---CDKSAKLWDVRSGQCVQ-TFEGH-ESDINSVRFFPSGDAFATGSDDATC--RLYDLRA 260 (343)
T ss_pred --Eecc---cccceeeeeccCcceeE-eeccc-ccccceEEEccCCCeeeecCCCcee--EEEeecC
Confidence 3321 12234556776533232 34332 2346777777765433 44455543 4456653
No 283
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=96.84 E-value=0.31 Score=51.44 Aligned_cols=236 Identities=13% Similarity=0.093 Sum_probs=127.9
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cc-cCccceeEEecCC-eEEEEEeCCCCCCceEEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~ 157 (648)
+-+.-+.|| ....||.+.. ..||+|+..+++.+.. .+ .+....+.|+++| .|+....+ ..|.++|
T Consensus 178 fY~nlldWs-s~n~laValg------~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~-----g~v~iwD 245 (484)
T KOG0305|consen 178 FYLNLLDWS-SANVLAVALG------QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSD-----GTVQIWD 245 (484)
T ss_pred HhhhHhhcc-cCCeEEEEec------ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecC-----CeEEEEe
Confidence 344557899 6667888763 5899999999997654 33 3445679999999 77665432 3477777
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeEeeec-ccceeeeEeecCCEEEE
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPR-VVGVDTAASHRGNHFFI 235 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~-~~~~~~~~s~dg~~l~~ 235 (648)
+.... ...-+..........++|.. .+ +.+..+ ...|...|+...+ ....+... ....-..|++|+.+++-
T Consensus 246 ~~~~k--~~~~~~~~h~~rvg~laW~~---~~-lssGsr-~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lAS 318 (484)
T KOG0305|consen 246 VKEQK--KTRTLRGSHASRVGSLAWNS---SV-LSSGSR-DGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLAS 318 (484)
T ss_pred hhhcc--ccccccCCcCceeEEEeccC---ce-EEEecC-CCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeecc
Confidence 76542 22222221122333566762 12 222222 2445566665544 11112111 11122459999987653
Q ss_pred EeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeec
Q 006375 236 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEF 315 (648)
Q Consensus 236 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~ 315 (648)
-.|+ ..+++.|...+.....+..+...+...+|.+....++...--.....|.+++... |..+ .-
T Consensus 319 GgnD-----N~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~-g~~i---------~~ 383 (484)
T KOG0305|consen 319 GGND-----NVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNT-GARI---------DS 383 (484)
T ss_pred CCCc-----cceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCC-CcEe---------cc
Confidence 3332 3677777755343333666666655556666556666555444456788888873 3322 11
Q ss_pred CCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEE
Q 006375 316 IDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDY 350 (648)
Q Consensus 316 ~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~ 350 (648)
.+....|..+.+.+...++..+..-...-=+||.|
T Consensus 384 vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ 418 (484)
T KOG0305|consen 384 VDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKY 418 (484)
T ss_pred cccCCceeeEEEcCCCCEEEEecCCCCCcEEEEec
Confidence 11111244455666666666555444332234444
No 284
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=96.82 E-value=0.48 Score=45.07 Aligned_cols=157 Identities=16% Similarity=0.171 Sum_probs=82.0
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee-eccccCc---cceeEEecCC-eEEEEEeCCCCCCceEE
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-GKPLVGV---TASVEWAGNE-ALVYITMDEILRPDKAW 154 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~-~~~~~~~---~~~~~WspDg-~l~y~~~~~~~~~~~l~ 154 (648)
.-++..++|||.|++||-.+-. .++.|+.-..++.. ..++++. .-.++||++| .|+-.+. ...||
T Consensus 61 krsVRsvAwsp~g~~La~aSFD-----~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSR-----DKSVW 130 (312)
T KOG0645|consen 61 KRSVRSVAWSPHGRYLASASFD-----ATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSR-----DKSVW 130 (312)
T ss_pred hheeeeeeecCCCcEEEEeecc-----ceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeC-----CCeEE
Confidence 4678999999999999987642 34555554444432 2244442 3459999999 6654332 34588
Q ss_pred EEECCCCCCCc-EEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeee---cccce-eeeEeec
Q 006375 155 LHKLEADQSND-ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP---RVVGV-DTAASHR 229 (648)
Q Consensus 155 ~~~l~~~~~~~-~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~---~~~~~-~~~~s~d 229 (648)
.+.+..+..-+ .-+++++... .=.+.|.|-.. |+++.+-.++-.+|.-+. +.. +..+.. +..-+ ...|++.
T Consensus 131 iWe~deddEfec~aVL~~HtqD-VK~V~WHPt~d-lL~S~SYDnTIk~~~~~~-ddd-W~c~~tl~g~~~TVW~~~F~~~ 206 (312)
T KOG0645|consen 131 IWEIDEDDEFECIAVLQEHTQD-VKHVIWHPTED-LLFSCSYDNTIKVYRDED-DDD-WECVQTLDGHENTVWSLAFDNI 206 (312)
T ss_pred EEEecCCCcEEEEeeecccccc-ccEEEEcCCcc-eeEEeccCCeEEEEeecC-CCC-eeEEEEecCccceEEEEEecCC
Confidence 88887542111 1233322111 11346777543 444443333344444433 333 333322 21111 1236777
Q ss_pred CCEEEEEeccCCCCCcEEEE--EeCC
Q 006375 230 GNHFFITRRSDELFNSELLA--CPVD 253 (648)
Q Consensus 230 g~~l~~~~~~~~~~~~~l~~--~~~~ 253 (648)
|..+.-.++. ...+|++ +++.
T Consensus 207 G~rl~s~sdD---~tv~Iw~~~~~~~ 229 (312)
T KOG0645|consen 207 GSRLVSCSDD---GTVSIWRLYTDLS 229 (312)
T ss_pred CceEEEecCC---cceEeeeeccCcc
Confidence 8776655553 3456666 5554
No 285
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=96.81 E-value=0.024 Score=63.20 Aligned_cols=78 Identities=24% Similarity=0.367 Sum_probs=50.7
Q ss_pred EEEeeEEeCCCCCEEEE-EEeCC--CCeEEEEEEEECCCCC--eeeccccCccceeEE--ecCC--eEEEEEeCCCCC--
Q 006375 81 YSVGCFQVSPDNKLVAY-AEDTK--GDEIYTVYVIDIETGT--PVGKPLVGVTASVEW--AGNE--ALVYITMDEILR-- 149 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~-~~~~~--G~e~~~l~v~dl~~g~--~~~~~~~~~~~~~~W--spDg--~l~y~~~~~~~~-- 149 (648)
..+-+|.|||||++||| ++-.+ | ...|||.+|.+.. .+....+++.- +.| .+.| .|.|++...++.
T Consensus 350 ~~i~sP~~SPDG~~vAY~ts~e~~~g--~s~vYv~~L~t~~~~~vkl~ve~aai-prwrv~e~gdt~ivyv~~a~nn~d~ 426 (912)
T TIGR02171 350 ISVYHPDISPDGKKVAFCTGIEGLPG--KSSVYVRNLNASGSGLVKLPVENAAI-PRWRVLENGDTVIVYVSDASNNKDD 426 (912)
T ss_pred CceecCcCCCCCCEEEEEEeecCCCC--CceEEEEehhccCCCceEeecccccc-cceEecCCCCeEEEEEcCCCCCcch
Confidence 35568999999999999 54444 4 6789999998743 33344555432 666 5767 788887644332
Q ss_pred ----CceEEEEECCCC
Q 006375 150 ----PDKAWLHKLEAD 161 (648)
Q Consensus 150 ----~~~l~~~~l~~~ 161 (648)
...-|.+....+
T Consensus 427 ~~~~~~stw~v~f~~g 442 (912)
T TIGR02171 427 ATFAAYSTWQVPFANG 442 (912)
T ss_pred hhhhhcceEEEEecCC
Confidence 234566655544
No 286
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=96.78 E-value=0.066 Score=51.91 Aligned_cols=176 Identities=15% Similarity=0.093 Sum_probs=83.7
Q ss_pred EEEEECCCCCeee-----ccccCc--cceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEee----cC--C
Q 006375 109 VYVIDIETGTPVG-----KPLVGV--TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHE----KD--D 174 (648)
Q Consensus 109 l~v~dl~~g~~~~-----~~~~~~--~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~----~~--~ 174 (648)
|.+||.-+|+.+. +..+.+ ..+++|+||| +| |..+. .-|...++..+. .+-.++.. +. .
T Consensus 135 Ih~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeql-faGyk-----rcirvFdt~RpG-r~c~vy~t~~~~k~gq~ 207 (406)
T KOG2919|consen 135 IHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQL-FAGYK-----RCIRVFDTSRPG-RDCPVYTTVTKGKFGQK 207 (406)
T ss_pred eeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeE-eeccc-----ceEEEeeccCCC-CCCcchhhhhccccccc
Confidence 5566666666552 111111 3358999999 66 44442 224444442221 12222211 11 1
Q ss_pred CeEEEEEeCCC-CcEEEEEEccccccEEEEEECCCCCceeEeeeccccee-eeEeecCCEEEEEeccCCCCCcEEEEEeC
Q 006375 175 IYSLGLQASES-KKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPV 252 (648)
Q Consensus 175 ~~~~~~~~s~D-g~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 252 (648)
....-++++|- .+-+++.+. .....||.-| +..+...+-.+..++. ..|.+||..|+.-+..+ -+|...|+
T Consensus 208 giisc~a~sP~~~~~~a~gsY-~q~~giy~~~--~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~----dkIl~WDi 280 (406)
T KOG2919|consen 208 GIISCFAFSPMDSKTLAVGSY-GQRVGIYNDD--GRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKD----DKILCWDI 280 (406)
T ss_pred ceeeeeeccCCCCcceeeecc-cceeeeEecC--CCCceeeecccCCCeeeEEeccCcCeecccccCC----CeEEEEee
Confidence 23334567774 334444322 1223455443 3333555555666655 46999999887666543 37888888
Q ss_pred CCCCccee-EecCCCCcc-cceEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 006375 253 DNTSETTV-LIPHRESVK-LQDIQLFIDHLAVYEREGGLQKITTYRLPA 299 (648)
Q Consensus 253 ~~~~~~~~-~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~ 299 (648)
.......| +-.+..+.. -.-|+.+++.-++..- +....+.+|+++.
T Consensus 281 R~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG-~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 281 RYSRDPVYALERHVGDTNQRILFDLDPKGEILASG-DTDGSVRVWDLKD 328 (406)
T ss_pred hhccchhhhhhhhccCccceEEEecCCCCceeecc-CCCccEEEEecCC
Confidence 65333333 222222111 1123444433322221 1234577778774
No 287
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=96.78 E-value=0.11 Score=56.62 Aligned_cols=148 Identities=13% Similarity=0.157 Sum_probs=76.3
Q ss_pred eeEEecCCeEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCC-CCcEEEEEEccccccEEEEEECCC
Q 006375 130 SVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSK 208 (648)
Q Consensus 130 ~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~-Dg~~l~~~~~~~~~~~l~~~dl~~ 208 (648)
.+.||.++.|+=.+.|. .|.++.++.. +=+.+|... .|..-+++.| |.+|++- .+ -+..+.++++..
T Consensus 374 DlSWSKn~fLLSSSMDK-----TVRLWh~~~~--~CL~~F~Hn--dfVTcVaFnPvDDryFiS--GS-LD~KvRiWsI~d 441 (712)
T KOG0283|consen 374 DLSWSKNNFLLSSSMDK-----TVRLWHPGRK--ECLKVFSHN--DFVTCVAFNPVDDRYFIS--GS-LDGKVRLWSISD 441 (712)
T ss_pred ecccccCCeeEeccccc-----cEEeecCCCc--ceeeEEecC--CeeEEEEecccCCCcEee--cc-cccceEEeecCc
Confidence 47888887665544433 2666677765 456777665 3555677888 6677652 22 234566666665
Q ss_pred CCceeEeeecccce-eeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCc-ceeEecCC-----CCcccceEEEeC---C
Q 006375 209 PEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSE-TTVLIPHR-----ESVKLQDIQLFI---D 278 (648)
Q Consensus 209 ~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~---~ 278 (648)
.+ +..-+.-.+-+ ...++|||+..++-+-. +....++..+... ..+-+... .+..|.++.++. +
T Consensus 442 ~~-Vv~W~Dl~~lITAvcy~PdGk~avIGt~~-----G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~ 515 (712)
T KOG0283|consen 442 KK-VVDWNDLRDLITAVCYSPDGKGAVIGTFN-----GYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPD 515 (712)
T ss_pred Ce-eEeehhhhhhheeEEeccCCceEEEEEec-----cEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCC
Confidence 54 22111111111 23478888866655543 2233333322110 01111111 122477777764 3
Q ss_pred EEEEEEecCCeeEEEEEEcC
Q 006375 279 HLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 279 ~l~~~~~~~~~~~l~v~~~~ 298 (648)
.+++..++ ++|++++..
T Consensus 516 ~vLVTSnD---SrIRI~d~~ 532 (712)
T KOG0283|consen 516 EVLVTSND---SRIRIYDGR 532 (712)
T ss_pred eEEEecCC---CceEEEecc
Confidence 45555443 678888874
No 288
>PLN00181 protein SPA1-RELATED; Provisional
Probab=96.73 E-value=1.5 Score=51.10 Aligned_cols=150 Identities=17% Similarity=0.169 Sum_probs=83.3
Q ss_pred EEeeEEeCCC-CCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc--cCccceeEEec-CCeEEEEEeCCCCCCceEEEEE
Q 006375 82 SVGCFQVSPD-NKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAG-NEALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 82 ~~~~~~~SPD-G~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~Wsp-Dg~l~y~~~~~~~~~~~l~~~~ 157 (648)
.+..+.|+|. +++||-. ..+| +|.+||+.+++.+.... .+....++|+| |+.++.+...+ ..|..++
T Consensus 534 ~v~~l~~~~~~~~~las~-~~Dg----~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~D----g~v~iWd 604 (793)
T PLN00181 534 KLSGICWNSYIKSQVASS-NFEG----VVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDD----GSVKLWS 604 (793)
T ss_pred ceeeEEeccCCCCEEEEE-eCCC----eEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCC----CEEEEEE
Confidence 4567788775 5666543 3334 79999999887654211 22244699997 55665665432 3477888
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEe-CCCCcEEEEEEccccccEEEEEECCCCC-ceeEeeeccccee-eeEeecCCEEE
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQA-SESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAASHRGNHFF 234 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~-s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~~-~~~s~dg~~l~ 234 (648)
+.++. ....+... .....+.| +++|.+|+..+. +..|+++|+.+.. ....+......+. ..|. ++..|+
T Consensus 605 ~~~~~--~~~~~~~~--~~v~~v~~~~~~g~~latgs~---dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lv 676 (793)
T PLN00181 605 INQGV--SIGTIKTK--ANICCVQFPSESGRSLAFGSA---DHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLV 676 (793)
T ss_pred CCCCc--EEEEEecC--CCeEEEEEeCCCCCEEEEEeC---CCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEE
Confidence 87652 22233222 12234556 467888776443 3579999997654 2223333322232 2354 666554
Q ss_pred EEeccCCCCCcEEEEEeCC
Q 006375 235 ITRRSDELFNSELLACPVD 253 (648)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~ 253 (648)
..+.+ ..|...|+.
T Consensus 677 s~s~D-----~~ikiWd~~ 690 (793)
T PLN00181 677 SSSTD-----NTLKLWDLS 690 (793)
T ss_pred EEECC-----CEEEEEeCC
Confidence 44432 245555654
No 289
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=96.65 E-value=0.69 Score=44.55 Aligned_cols=195 Identities=12% Similarity=0.090 Sum_probs=99.0
Q ss_pred cceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEEC
Q 006375 128 TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV 206 (648)
Q Consensus 128 ~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl 206 (648)
...+.|++|+ .|+-.++| .+|..++.-|..+... . .....|.+..+++|.|.+++... -++.--++++
T Consensus 58 i~~~~ws~Dsr~ivSaSqD-----GklIvWDs~TtnK~ha--i-pl~s~WVMtCA~sPSg~~VAcGG---LdN~Csiy~l 126 (343)
T KOG0286|consen 58 IYAMDWSTDSRRIVSASQD-----GKLIVWDSFTTNKVHA--I-PLPSSWVMTCAYSPSGNFVACGG---LDNKCSIYPL 126 (343)
T ss_pred eeeeEecCCcCeEEeeccC-----CeEEEEEcccccceeE--E-ecCceeEEEEEECCCCCeEEecC---cCceeEEEec
Confidence 3459999999 66544332 3577888776533222 1 12346888899999999987532 1233334455
Q ss_pred CCC--CceeEeeecccceee-----eEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeC-C
Q 006375 207 SKP--EELRVLTPRVVGVDT-----AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-D 278 (648)
Q Consensus 207 ~~~--~~~~~l~~~~~~~~~-----~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 278 (648)
.+. +...++.....+..- .+-.|+ +|+-.+ +.......|++++...+....|..+ +.++++.+ +
T Consensus 127 s~~d~~g~~~v~r~l~gHtgylScC~f~dD~-~ilT~S-----GD~TCalWDie~g~~~~~f~GH~gD--V~slsl~p~~ 198 (343)
T KOG0286|consen 127 STRDAEGNVRVSRELAGHTGYLSCCRFLDDN-HILTGS-----GDMTCALWDIETGQQTQVFHGHTGD--VMSLSLSPSD 198 (343)
T ss_pred ccccccccceeeeeecCccceeEEEEEcCCC-ceEecC-----CCceEEEEEcccceEEEEecCCccc--EEEEecCCCC
Confidence 443 212233222233221 233444 343222 2356778898874333323334444 45555544 3
Q ss_pred -EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 279 -HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 279 -~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
..++....+... .+|++... . -.-.|+.....|..+.+-|++. .|...|...--++ ||+...+
T Consensus 199 ~ntFvSg~cD~~a--klWD~R~~-~--------c~qtF~ghesDINsv~ffP~G~--afatGSDD~tcRl--yDlRaD~ 262 (343)
T KOG0286|consen 199 GNTFVSGGCDKSA--KLWDVRSG-Q--------CVQTFEGHESDINSVRFFPSGD--AFATGSDDATCRL--YDLRADQ 262 (343)
T ss_pred CCeEEecccccce--eeeeccCc-c--------eeEeecccccccceEEEccCCC--eeeecCCCceeEE--EeecCCc
Confidence 344555555444 45566532 2 1234554443455555555555 3444444444444 5555544
No 290
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.64 E-value=0.0067 Score=60.89 Aligned_cols=130 Identities=20% Similarity=0.315 Sum_probs=82.2
Q ss_pred eEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCch---hHHHHHH-CCCEEEEEccCCCCC---CChhhhhccc-
Q 006375 387 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS---SRLSLLD-RGFIFAIAQIRGGGE---LGRQWYENGK- 458 (648)
Q Consensus 387 ~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~---~~~~l~~-~G~~v~~~~~rG~g~---~g~~~~~~~~- 458 (648)
.+.+..++....++++ ++.|+++|. |.-|. .. .|.. .+..++. .+-.++.+..|-=|+ +|.+=+....
T Consensus 63 ~tF~qRylin~~fw~~-g~gPIffYt-GNEGd-ie-~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~h 138 (492)
T KOG2183|consen 63 KTFDQRYLINDDFWKK-GEGPIFFYT-GNEGD-IE-WFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARH 138 (492)
T ss_pred cceeeEEEEecccccC-CCCceEEEe-CCccc-HH-HHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhh
Confidence 4455565666555333 446776665 42221 11 1221 1233443 488889999885443 3333111111
Q ss_pred --ccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeE-EEecCCcc
Q 006375 459 --FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKA-AVAAVPFV 520 (648)
Q Consensus 459 --~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a-~v~~~~~~ 520 (648)
-..-++.+.|+...+.+|+.........|.++|+|+||+|+++.-..+|+++.+ .++.+|++
T Consensus 139 lgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 139 LGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred hccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 123346889999999999988666778999999999999999999999997664 44566755
No 291
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.63 E-value=0.6 Score=55.52 Aligned_cols=196 Identities=15% Similarity=0.141 Sum_probs=105.2
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc------------------cCccceeEEecCC-eEEEEE
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL------------------VGVTASVEWAGNE-ALVYIT 143 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~------------------~~~~~~~~WspDg-~l~y~~ 143 (648)
-.++.++++|+.| |..|..+ ..|+++|+.++....... -+.-..++++|++ .+|++
T Consensus 626 P~GIavd~~gn~L-YVaDt~n---~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVa- 700 (1057)
T PLN02919 626 PQGLAYNAKKNLL-YVADTEN---HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIA- 700 (1057)
T ss_pred CcEEEEeCCCCEE-EEEeCCC---ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEE-
Confidence 3577888988875 4445433 578889988776542210 0011348899976 66554
Q ss_pred eCCCCCCceEEEEECCCCCCCcEEEEeecC--------------CCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCC
Q 006375 144 MDEILRPDKAWLHKLEADQSNDICLYHEKD--------------DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 209 (648)
Q Consensus 144 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~--------------~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~ 209 (648)
. ....+|+.++..++. ...+.... ...-.+++++|||++|++.. ...+.|+++|++++
T Consensus 701 d---~~~~~I~v~d~~~g~---v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVAD--s~n~~Irv~D~~tg 772 (1057)
T PLN02919 701 M---AGQHQIWEYNISDGV---TRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIAD--SESSSIRALDLKTG 772 (1057)
T ss_pred E---CCCCeEEEEECCCCe---EEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEE--CCCCeEEEEECCCC
Confidence 3 234568888876541 12221100 01123578999999887743 34578999999876
Q ss_pred CceeEeeecc-------------cc----------eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCC
Q 006375 210 EELRVLTPRV-------------VG----------VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE 266 (648)
Q Consensus 210 ~~~~~l~~~~-------------~~----------~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 266 (648)
. ...+.... ++ ....++++|. +|+. +. .+.+|.++|.++. ....+.....
T Consensus 773 ~-~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYVA-Ds---~N~rIrviD~~tg-~v~tiaG~G~ 845 (1057)
T PLN02919 773 G-SRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYVA-DS---YNHKIKKLDPATK-RVTTLAGTGK 845 (1057)
T ss_pred c-EEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEEE-EC---CCCEEEEEECCCC-eEEEEeccCC
Confidence 5 33322110 00 1123677775 5444 32 3568888887652 2221221110
Q ss_pred ------------CcccceEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 006375 267 ------------SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 299 (648)
Q Consensus 267 ------------~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~ 299 (648)
-....++.++.++-+++ .+....+|.+++++.
T Consensus 846 ~G~~dG~~~~a~l~~P~GIavd~dG~lyV-aDt~Nn~Irvid~~~ 889 (1057)
T PLN02919 846 AGFKDGKALKAQLSEPAGLALGENGRLFV-ADTNNSLIRYLDLNK 889 (1057)
T ss_pred cCCCCCcccccccCCceEEEEeCCCCEEE-EECCCCEEEEEECCC
Confidence 01244556655433222 233445788888874
No 292
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=96.61 E-value=0.069 Score=53.34 Aligned_cols=107 Identities=14% Similarity=0.067 Sum_probs=52.1
Q ss_pred EEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccce-eeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCc
Q 006375 179 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 257 (648)
Q Consensus 179 ~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 257 (648)
.+.|.|.-..|+ + .+++ +-+-++|..++..+..+.....-+ ...|++++.+|+-.+.+ ..+.++|+..-.+
T Consensus 227 svdWHP~kgLia-s-gskD-nlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD-----~~~kv~DiR~mkE 298 (464)
T KOG0284|consen 227 SVDWHPTKGLIA-S-GSKD-NLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKD-----QSCKVFDIRTMKE 298 (464)
T ss_pred eeccCCccceeE-E-ccCC-ceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCC-----ceEEEEehhHhHH
Confidence 356777644333 2 2222 266777887765111122221112 24589999877655443 2455667653222
Q ss_pred ceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEE
Q 006375 258 TTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKIT 293 (648)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 293 (648)
....-.+..++.-..+.+....++...--+|.-..+
T Consensus 299 l~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~ 334 (464)
T KOG0284|consen 299 LFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHW 334 (464)
T ss_pred HHHhhcchhhheeeccccccccceeeccCCCceEEE
Confidence 221222333433344566666776665555543333
No 293
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=96.60 E-value=0.014 Score=61.25 Aligned_cols=152 Identities=13% Similarity=0.157 Sum_probs=87.7
Q ss_pred EEeeEEeCCCC-CEEEEEEeCCCCeEEEEEEEECCCCCeeec---cccCccceeEEecCC-eEEEEEeCCCCCCceEEEE
Q 006375 82 SVGCFQVSPDN-KLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 82 ~~~~~~~SPDG-~~la~~~~~~G~e~~~l~v~dl~~g~~~~~---~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~ 156 (648)
.+..++|.|=- ..||.++ -..+|.+||+++++.... ..+.++ +++||||| .++-+..|. .|+.|
T Consensus 679 KI~slRfHPLAadvLa~as-----yd~Ti~lWDl~~~~~~~~l~gHtdqIf-~~AWSpdGr~~AtVcKDg-----~~rVy 747 (1012)
T KOG1445|consen 679 KITSLRFHPLAADVLAVAS-----YDSTIELWDLANAKLYSRLVGHTDQIF-GIAWSPDGRRIATVCKDG-----TLRVY 747 (1012)
T ss_pred eEEEEEecchhhhHhhhhh-----ccceeeeeehhhhhhhheeccCcCcee-EEEECCCCcceeeeecCc-----eEEEe
Confidence 45677888732 2233222 246899999999876532 223344 59999999 777665543 46677
Q ss_pred ECCCCCCCcEEEEeecCCC--eEEEEEeCCCCcEEEEEEccc-cccEEEEEECCCCCceeEeeecccce-----eeeEee
Q 006375 157 KLEADQSNDICLYHEKDDI--YSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVGV-----DTAASH 228 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~--~~~~~~~s~Dg~~l~~~~~~~-~~~~l~~~dl~~~~~~~~l~~~~~~~-----~~~~s~ 228 (648)
...+. ...+++.+.+. -...+.|.=||++|++..-++ ....|-++|.++-. ...|....-++ ..+.++
T Consensus 748 ~Prs~---e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~-~~pl~t~~lDvaps~LvP~YD~ 823 (1012)
T KOG1445|consen 748 EPRSR---EQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLD-LRPLYTQVLDVAPSPLVPHYDY 823 (1012)
T ss_pred CCCCC---CCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhcc-CCcceeeeecccCccccccccC
Confidence 66554 45667665432 234567888999998875444 33567777766544 22222211111 123556
Q ss_pred cCCEEEEEeccCCCCCcEEEEEeC
Q 006375 229 RGNHFFITRRSDELFNSELLACPV 252 (648)
Q Consensus 229 dg~~l~~~~~~~~~~~~~l~~~~~ 252 (648)
|.. ++|++..+ ...++.+.+
T Consensus 824 Ds~-~lfltGKG---D~~v~~yEv 843 (1012)
T KOG1445|consen 824 DSN-VLFLTGKG---DRFVNMYEV 843 (1012)
T ss_pred CCc-eEEEecCC---CceEEEEEe
Confidence 665 55666652 235555554
No 294
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.59 E-value=0.023 Score=59.83 Aligned_cols=164 Identities=19% Similarity=0.174 Sum_probs=93.3
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHC-C--CEEEEEccCC-CCCCChhhhhcccccCCCCcHhHHHHHHHHHHH--c
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDR-G--FIFAIAQIRG-GGELGRQWYENGKFLKKKNTFTDFIACAEYLIK--N 479 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G--~~v~~~~~rG-~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~--~ 479 (648)
.|+++..||++-......|...++..+.. | .-|..+|++. .|| .+-....+-++...++.+. .
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-----------~nI~h~ae~~vSf~r~kvlei~ 244 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-----------ANIKHAAEYSVSFDRYKVLEIT 244 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-----------cchHHHHHHHHHHhhhhhhhhh
Confidence 58999999987322233344444433332 3 4455666652 222 1111122334444443222 2
Q ss_pred CCCCCCeEEEEeeChhHHHHHHHHhhCCCc-eeEEEecCCcccccccccCCCCCCCcccccccCCCCCHHHHHHHHcCCc
Q 006375 480 CYCTKEKLCIEGRSAGGLLIGAVLNMRPDL-FKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSP 558 (648)
Q Consensus 480 ~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~-~~a~v~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp 558 (648)
+..--..|.++|+|||..++..+...+-|. +.|+||..=.+|-..- + -|.+ |+.
T Consensus 245 gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg------p--------rgir-DE~---------- 299 (784)
T KOG3253|consen 245 GEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG------P--------RGIR-DEA---------- 299 (784)
T ss_pred ccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc------c--------cCCc-chh----------
Confidence 333447899999999987776666555443 5566665422221110 0 0221 111
Q ss_pred cccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccC
Q 006375 559 VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 615 (648)
Q Consensus 559 ~~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~ 615 (648)
+-..+.| +|++.|.+|.+|++..-+++.+++++ +++++++. +++|..
T Consensus 300 ---Lldmk~P-VLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~---~adhsm 346 (784)
T KOG3253|consen 300 ---LLDMKQP-VLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIG---GADHSM 346 (784)
T ss_pred ---hHhcCCc-eEEEecCCcccCCHHHHHHHHHHhhc---cceEEEec---CCCccc
Confidence 1123456 99999999999999999999988886 45667775 889944
No 295
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=96.58 E-value=0.075 Score=55.96 Aligned_cols=199 Identities=11% Similarity=0.039 Sum_probs=101.5
Q ss_pred EEEeeEEeCC-CCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC-------ccceeEEecCC--eEEEEEeCCCCCC
Q 006375 81 YSVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-------VTASVEWAGNE--ALVYITMDEILRP 150 (648)
Q Consensus 81 ~~~~~~~~SP-DG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~-------~~~~~~WspDg--~l~y~~~~~~~~~ 150 (648)
..+..+.|.| |-.+||...+. | +.+||-+...+......+... ....+.|.|=- -|+...+ .
T Consensus 628 t~vtDl~WdPFD~~rLAVa~dd-g--~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asy-----d 699 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATDD-G--QINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASY-----D 699 (1012)
T ss_pred ceeeecccCCCChHHeeecccC-c--eEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhc-----c
Confidence 4667888888 77788887663 3 344554444433322111111 12336666543 2222222 2
Q ss_pred ceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecc-----cceeee
Q 006375 151 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-----VGVDTA 225 (648)
Q Consensus 151 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~-----~~~~~~ 225 (648)
..|.++|+.+. ++..-+..+... .++++|||||+.++-...+ ..|+++....++ +.+..+. .+....
T Consensus 700 ~Ti~lWDl~~~--~~~~~l~gHtdq-If~~AWSpdGr~~AtVcKD---g~~rVy~Prs~e--~pv~Eg~gpvgtRgARi~ 771 (1012)
T KOG1445|consen 700 STIELWDLANA--KLYSRLVGHTDQ-IFGIAWSPDGRRIATVCKD---GTLRVYEPRSRE--QPVYEGKGPVGTRGARIL 771 (1012)
T ss_pred ceeeeeehhhh--hhhheeccCcCc-eeEEEECCCCcceeeeecC---ceEEEeCCCCCC--CccccCCCCccCcceeEE
Confidence 34667788776 334444444333 3489999999998754332 456777666654 3333221 234456
Q ss_pred EeecCCEEEEEeccCCCCCcEEEEEeCCCCCcce---eEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 226 ASHRGNHFFITRRSDELFNSELLACPVDNTSETT---VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 226 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
|.=||+.++.+.-. .....+|..++..+..... ..+.......+..++.+.+-+++. -.|...++.|.+-
T Consensus 772 wacdgr~viv~Gfd-k~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lflt--GKGD~~v~~yEv~ 844 (1012)
T KOG1445|consen 772 WACDGRIVIVVGFD-KSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLT--GKGDRFVNMYEVI 844 (1012)
T ss_pred EEecCcEEEEeccc-ccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEe--cCCCceEEEEEec
Confidence 88888877666543 3334456666654322111 122222222333444444433333 3345566666553
No 296
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.56 E-value=0.0056 Score=56.02 Aligned_cols=105 Identities=16% Similarity=0.101 Sum_probs=74.4
Q ss_pred EEEEecCCCCCCC--CCCCchhHHHHHHCCCEEEEEccCCCC-CCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCC
Q 006375 408 LLLYGYGSYEICN--DPAFNSSRLSLLDRGFIFAIAQIRGGG-ELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 484 (648)
Q Consensus 408 ~vl~~hGg~~~~~--~~~~~~~~~~l~~~G~~v~~~~~rG~g-~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 484 (648)
.||++ ||-+... .+.-......+.+.+|..+.+-.|-+- |||.. .-+.+.+|+..++++++..+..
T Consensus 38 ~vvfi-GGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~--------slk~D~edl~~l~~Hi~~~~fS-- 106 (299)
T KOG4840|consen 38 KVVFI-GGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF--------SLKDDVEDLKCLLEHIQLCGFS-- 106 (299)
T ss_pred EEEEE-cccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc--------cccccHHHHHHHHHHhhccCcc--
Confidence 34444 5444433 232334456777889999999988654 35432 2235679999999999877653
Q ss_pred CeEEEEeeChhHHHHHHHHhhC--CCceeEEEecCCccccc
Q 006375 485 EKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPFVDVL 523 (648)
Q Consensus 485 ~~i~i~G~S~GG~l~~~~~~~~--p~~~~a~v~~~~~~d~~ 523 (648)
..|.++|||-|+-=++.++++. |..++|+|+++|+.|.-
T Consensus 107 t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 107 TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred cceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 5999999999999777777543 55788999999999854
No 297
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=96.55 E-value=0.71 Score=43.44 Aligned_cols=176 Identities=13% Similarity=0.110 Sum_probs=102.3
Q ss_pred EEEEEEEECCCCCeeec--cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEe
Q 006375 106 IYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQA 182 (648)
Q Consensus 106 ~~~l~v~dl~~g~~~~~--~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 182 (648)
..+|++|...||.=... ..+.....++-+||+ .|+. ....+|.++|+.+........|+..... ...+.+
T Consensus 19 DhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAa------a~~qhvRlyD~~S~np~Pv~t~e~h~kN-VtaVgF 91 (311)
T KOG0315|consen 19 DHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAA------AGNQHVRLYDLNSNNPNPVATFEGHTKN-VTAVGF 91 (311)
T ss_pred cceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhh------ccCCeeEEEEccCCCCCceeEEeccCCc-eEEEEE
Confidence 46899999999974321 223334558899999 6643 2345689999998865566667655333 335677
Q ss_pred CCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccce-eeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeE
Q 006375 183 SESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVL 261 (648)
Q Consensus 183 s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 261 (648)
.-||||++- .++.+. +.++|+.... .+++......+ ...+-|+-..| |+.+. +++|.+.|+....-...+
T Consensus 92 ~~dgrWMyT-gseDgt--~kIWdlR~~~-~qR~~~~~spVn~vvlhpnQteL-is~dq----sg~irvWDl~~~~c~~~l 162 (311)
T KOG0315|consen 92 QCDGRWMYT-GSEDGT--VKIWDLRSLS-CQRNYQHNSPVNTVVLHPNQTEL-ISGDQ----SGNIRVWDLGENSCTHEL 162 (311)
T ss_pred eecCeEEEe-cCCCce--EEEEeccCcc-cchhccCCCCcceEEecCCcceE-EeecC----CCcEEEEEccCCcccccc
Confidence 889999863 333333 4455665554 33333222222 22344444444 44443 246777888652233337
Q ss_pred ecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 006375 262 IPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 299 (648)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~ 299 (648)
+|+.+ ..++++....|+-.+...+ .....+++++-.
T Consensus 163 iPe~~-~~i~sl~v~~dgsml~a~n-nkG~cyvW~l~~ 198 (311)
T KOG0315|consen 163 IPEDD-TSIQSLTVMPDGSMLAAAN-NKGNCYVWRLLN 198 (311)
T ss_pred CCCCC-cceeeEEEcCCCcEEEEec-CCccEEEEEccC
Confidence 77665 4577777766644333322 235678888764
No 298
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.53 E-value=0.011 Score=61.58 Aligned_cols=85 Identities=19% Similarity=0.139 Sum_probs=63.9
Q ss_pred CcEEEEecCCC-CCCCCCCCchhHHHHHHC-CCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHc----
Q 006375 406 DPLLLYGYGSY-EICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN---- 479 (648)
Q Consensus 406 ~P~vl~~hGg~-~~~~~~~~~~~~~~l~~~-G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---- 479 (648)
.-+|+++|||. -.+...+.......|+.. |.-|+.+||.-..|- .-....+++.-|.-|++.+
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEa-----------PFPRaleEv~fAYcW~inn~all 464 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEA-----------PFPRALEEVFFAYCWAINNCALL 464 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCC-----------CCCcHHHHHHHHHHHHhcCHHHh
Confidence 45899999964 344556677777777765 999999999866542 2235678999999999876
Q ss_pred CCCCCCeEEEEeeChhHHHHHHH
Q 006375 480 CYCTKEKLCIEGRSAGGLLIGAV 502 (648)
Q Consensus 480 ~~~d~~~i~i~G~S~GG~l~~~~ 502 (648)
|+ ..+||+++|.|+||.|..-+
T Consensus 465 G~-TgEriv~aGDSAGgNL~~~V 486 (880)
T KOG4388|consen 465 GS-TGERIVLAGDSAGGNLCFTV 486 (880)
T ss_pred Cc-ccceEEEeccCCCcceeehh
Confidence 44 46899999999999965433
No 299
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=96.52 E-value=0.79 Score=43.69 Aligned_cols=153 Identities=14% Similarity=0.140 Sum_probs=82.5
Q ss_pred EEeeEEeCCC-CCEEEEEEeCCCCeEEEEEEEECCCCCeee--cccc----CccceeEEecCC-eEEEEEeCCCCCCceE
Q 006375 82 SVGCFQVSPD-NKLVAYAEDTKGDEIYTVYVIDIETGTPVG--KPLV----GVTASVEWAGNE-ALVYITMDEILRPDKA 153 (648)
Q Consensus 82 ~~~~~~~SPD-G~~la~~~~~~G~e~~~l~v~dl~~g~~~~--~~~~----~~~~~~~WspDg-~l~y~~~~~~~~~~~l 153 (648)
++-.+.|+|- |..|| +. +..-.|+++++.++.... ..+. .....++|+|.| .|+-.++|.. . +
T Consensus 16 r~W~~awhp~~g~ilA-sc----g~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t---~-~ 86 (312)
T KOG0645|consen 16 RVWSVAWHPGKGVILA-SC----GTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT---V-V 86 (312)
T ss_pred cEEEEEeccCCceEEE-ee----cCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce---E-E
Confidence 5667899998 87554 32 224578999987544321 1221 124569999999 7766666542 1 1
Q ss_pred EEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCcee---Eeeeccccee-eeEeec
Q 006375 154 WLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR---VLTPRVVGVD-TAASHR 229 (648)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~---~l~~~~~~~~-~~~s~d 229 (648)
...+- .+.-+-...++.++ .-.=.++||++|++|+-.+. ...+|++..+...++. .|.+...++- ..|-|-
T Consensus 87 Iw~k~-~~efecv~~lEGHE-nEVK~Vaws~sG~~LATCSR---DKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt 161 (312)
T KOG0645|consen 87 IWKKE-DGEFECVATLEGHE-NEVKCVAWSASGNYLATCSR---DKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPT 161 (312)
T ss_pred EeecC-CCceeEEeeeeccc-cceeEEEEcCCCCEEEEeeC---CCeEEEEEecCCCcEEEEeeeccccccccEEEEcCC
Confidence 12222 22112222333332 22235789999999975433 3457777666443233 3444443333 336554
Q ss_pred CCEEEEEeccCCCCCcEEEEEe
Q 006375 230 GNHFFITRRSDELFNSELLACP 251 (648)
Q Consensus 230 g~~l~~~~~~~~~~~~~l~~~~ 251 (648)
.+ |+|....++ ..++|+-+
T Consensus 162 ~d-lL~S~SYDn--TIk~~~~~ 180 (312)
T KOG0645|consen 162 ED-LLFSCSYDN--TIKVYRDE 180 (312)
T ss_pred cc-eeEEeccCC--eEEEEeec
Confidence 44 666666532 24666654
No 300
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.45 E-value=0.083 Score=50.20 Aligned_cols=179 Identities=16% Similarity=0.096 Sum_probs=99.6
Q ss_pred EEEEecCCCCCCCCCC--CchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCC
Q 006375 408 LLLYGYGSYEICNDPA--FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 485 (648)
Q Consensus 408 ~vl~~hGg~~~~~~~~--~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 485 (648)
.||++-||......|. |......|+++||+|++.-|.-+-.. +..+ ...++.+..|++.|...+..++.
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH---~~~A------~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDH---QAIA------REVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcH---HHHH------HHHHHHHHHHHHHHHHhcCCCcc
Confidence 6888888755444443 44455688899999999988643221 1111 12346778888888877544443
Q ss_pred --eEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccccccccCCCCCCCcc---c-ccccCCCCCHHHHHHHHcCCcc
Q 006375 486 --KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTA---E-WEEWGDPWKEEFYFYMKSYSPV 559 (648)
Q Consensus 486 --~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~---~-~~~~g~~~~~~~~~~~~~~sp~ 559 (648)
.+.-+|||+|+-+-+.+....+..-++-|+.+ +-| .-.++.+|+... . -.|| .|.-.+....+++.-
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS-FNN---~~a~~aIP~~~~l~~~l~~EF-~PsP~ET~~li~~~Y-- 161 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS-FNN---FPADEAIPLLEQLAPALRLEF-TPSPEETRRLIRESY-- 161 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCcccceEEEe-cCC---hHHHhhCchHhhhccccccCc-cCCHHHHHHHHHHhc--
Confidence 67789999999987776655433223333332 111 112234443210 0 0122 233333333333311
Q ss_pred ccCCCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCcc
Q 006375 560 DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 614 (648)
Q Consensus 560 ~~~~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~ 614 (648)
..|..|++-=.+|. ..|+..+.+.|+....+ ++....- .+.|.
T Consensus 162 ------~~~rnLLIkF~~D~---iDqt~~L~~~L~~r~~~--~~~~~~L-~G~HL 204 (250)
T PF07082_consen 162 ------QVRRNLLIKFNDDD---IDQTDELEQILQQRFPD--MVSIQTL-PGNHL 204 (250)
T ss_pred ------CCccceEEEecCCC---ccchHHHHHHHhhhccc--cceEEeC-CCCCC
Confidence 22346777777776 36899999999875322 2333222 46673
No 301
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=96.44 E-value=0.6 Score=47.81 Aligned_cols=151 Identities=11% Similarity=0.092 Sum_probs=85.5
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc-cCccceeEEecCC-eEEEEEeCCCCCCceEEEEE
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~ 157 (648)
.-.+..+.||-||..||+..- +| .+++|+..++....... .+....+-|..+| +|+-...+ ....+++
T Consensus 235 nkdVT~L~Wn~~G~~LatG~~-~G----~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD-----~ttilwd 304 (524)
T KOG0273|consen 235 NKDVTSLDWNNDGTLLATGSE-DG----EARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVD-----GTTILWD 304 (524)
T ss_pred cCCcceEEecCCCCeEEEeec-Cc----EEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCC-----ccEEEEe
Confidence 356789999999999998764 34 78888887766543321 2334459999999 77654332 2355667
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccccee-eeEeecCCEEEEE
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFIT 236 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~ 236 (648)
.-++ +....|+.... -.+++.|-.+.++.. +..+..-.+|.++-+.+ ...+......+. ..|.|.|..|+-.
T Consensus 305 ~~~g--~~~q~f~~~s~-~~lDVdW~~~~~F~t--s~td~~i~V~kv~~~~P--~~t~~GH~g~V~alk~n~tg~LLaS~ 377 (524)
T KOG0273|consen 305 AHTG--TVKQQFEFHSA-PALDVDWQSNDEFAT--SSTDGCIHVCKVGEDRP--VKTFIGHHGEVNALKWNPTGSLLASC 377 (524)
T ss_pred ccCc--eEEEeeeeccC-CccceEEecCceEee--cCCCceEEEEEecCCCc--ceeeecccCceEEEEECCCCceEEEe
Confidence 6555 23444444322 134566766665442 33333344555554444 333444333332 4588888755444
Q ss_pred eccCCCCCcEEEEE
Q 006375 237 RRSDELFNSELLAC 250 (648)
Q Consensus 237 ~~~~~~~~~~l~~~ 250 (648)
+++ ...+|+-.
T Consensus 378 SdD---~TlkiWs~ 388 (524)
T KOG0273|consen 378 SDD---GTLKIWSM 388 (524)
T ss_pred cCC---CeeEeeec
Confidence 443 23456553
No 302
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=96.44 E-value=0.0046 Score=63.35 Aligned_cols=111 Identities=22% Similarity=0.248 Sum_probs=72.0
Q ss_pred EEEEecCCCCCCCCCCCchh-HHHHHHC-CCEEEEEccCCCCCCChhhhhcccccCCCC-cHhHHHHHHHHHHHc---CC
Q 006375 408 LLLYGYGSYEICNDPAFNSS-RLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKN-TFTDFIACAEYLIKN---CY 481 (648)
Q Consensus 408 ~vl~~hGg~~~~~~~~~~~~-~~~l~~~-G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~-~~~D~~~~~~~l~~~---~~ 481 (648)
++|++|||...+..++.... ...|+.. ..+|+.+|||-|. +|-= +-.+..+...| .+-|..=|++|+.++ -.
T Consensus 137 VlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~-FGFL-~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFG 214 (601)
T KOG4389|consen 137 VLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGA-FGFL-YLPGHPEAPGNMGLLDQQLALQWVQENIAAFG 214 (601)
T ss_pred EEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeecc-ceEE-ecCCCCCCCCccchHHHHHHHHHHHHhHHHhC
Confidence 88999997544444443322 2344444 5889999999543 2211 11122222222 567889999999887 33
Q ss_pred CCCCeEEEEeeChhHHHHHHHHhhCCC---ceeEEEecCCccc
Q 006375 482 CTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVD 521 (648)
Q Consensus 482 ~d~~~i~i~G~S~GG~l~~~~~~~~p~---~~~a~v~~~~~~d 521 (648)
-||+||.++|.|+|+.-+.+-+. .|. +|+-+|+++|-++
T Consensus 215 Gnp~~vTLFGESAGaASv~aHLl-sP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 215 GNPSRVTLFGESAGAASVVAHLL-SPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred CCcceEEEeccccchhhhhheec-CCCchhhHHHHHhhcCCCC
Confidence 69999999999999975544443 243 7999999988654
No 303
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.43 E-value=0.07 Score=56.89 Aligned_cols=83 Identities=17% Similarity=0.246 Sum_probs=70.3
Q ss_pred CCCceEEEecccccCCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCc-cceeEEecCC-eE
Q 006375 62 APPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV-TASVEWAGNE-AL 139 (648)
Q Consensus 62 ~~~~~~lld~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~-~~~~~WspDg-~l 139 (648)
..++++++|+|+... ++++.+..-++|-|++|+||.....|+++..|..+....|....+.+... ...++|.+|+ .+
T Consensus 106 ~~e~~~~ld~~~~~d-d~tV~Ld~~~~aed~~Y~~~gls~~spD~~~ia~~~~~~~~e~~~~v~~~~~~~~~~~~~~~g~ 184 (712)
T KOG2237|consen 106 EKEEEVFLDPNALGD-DGTVLLDTNQIAEDFKYFAYGLSESSPDHKYIAYTKDTEGKELFTVVIDVKFSGPVWTHDGKGV 184 (712)
T ss_pred hcccceecCCccCCC-CceEEechhhhhhcCCceEEeecccCCCceEEEEEEcCCCCccceeeeeeccCCceeeccCCce
Confidence 357789999999987 68899999999999999999999999999999999888887776555554 5679999999 88
Q ss_pred EEEEeC
Q 006375 140 VYITMD 145 (648)
Q Consensus 140 ~y~~~~ 145 (648)
+|.+..
T Consensus 185 ~y~~w~ 190 (712)
T KOG2237|consen 185 SYLAWA 190 (712)
T ss_pred Eeeeec
Confidence 887653
No 304
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.42 E-value=0.2 Score=47.10 Aligned_cols=195 Identities=13% Similarity=0.113 Sum_probs=105.1
Q ss_pred eEEeCCC-CCEEEEEEeC----CCCeEEEEEEEECCCCC-eeec---cccCccceeEEecCC-eEEEEEeCCCCCCceEE
Q 006375 85 CFQVSPD-NKLVAYAEDT----KGDEIYTVYVIDIETGT-PVGK---PLVGVTASVEWAGNE-ALVYITMDEILRPDKAW 154 (648)
Q Consensus 85 ~~~~SPD-G~~la~~~~~----~G~e~~~l~v~dl~~g~-~~~~---~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~ 154 (648)
+.++||= ..+||.+... .| ..+|+|.++..++ .... ...+....++|++.- .++++...+ ..|.
T Consensus 13 svqfSPf~~nrLavAt~q~yGl~G--~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GD----GSLr 86 (311)
T KOG0277|consen 13 SVQFSPFVENRLAVATAQHYGLAG--NGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGD----GSLR 86 (311)
T ss_pred eeEecccccchhheeehhhccccc--CceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecC----ceEE
Confidence 4577772 3344544221 23 3589999996433 3321 122223459999987 777766532 2366
Q ss_pred EEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceee--eEeecCCE
Q 006375 155 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT--AASHRGNH 232 (648)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~--~~s~dg~~ 232 (648)
++++..+ +....++.|+.. -..++.|.+-.++++++++-.++-.||..+.... ++..... ....| .|+|.-..
T Consensus 87 l~d~~~~-s~Pi~~~kEH~~-EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~S--v~Tf~gh-~~~Iy~a~~sp~~~n 161 (311)
T KOG0277|consen 87 LFDLTMP-SKPIHKFKEHKR-EVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNS--VQTFNGH-NSCIYQAAFSPHIPN 161 (311)
T ss_pred EeccCCC-CcchhHHHhhhh-heEEeccccccceeEEeeccCCceEeecCCCCcc--eEeecCC-ccEEEEEecCCCCCC
Confidence 6665544 456667766543 3447788988888888775555566665554332 3333222 22223 38886655
Q ss_pred EEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEe--CCEEEEEEecCCeeEEEEEEcC
Q 006375 233 FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF--IDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 233 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
++..+..+ ..+-..|++.+++.. .++... ..+....|. ++.+++....+. -++.+++.
T Consensus 162 lfas~Sgd----~~l~lwdvr~~gk~~-~i~ah~-~Eil~cdw~ky~~~vl~Tg~vd~--~vr~wDir 221 (311)
T KOG0277|consen 162 LFASASGD----GTLRLWDVRSPGKFM-SIEAHN-SEILCCDWSKYNHNVLATGGVDN--LVRGWDIR 221 (311)
T ss_pred eEEEccCC----ceEEEEEecCCCcee-EEEecc-ceeEeecccccCCcEEEecCCCc--eEEEEehh
Confidence 55444332 345555666555443 343222 234444444 455665555444 45666665
No 305
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.40 E-value=2 Score=51.28 Aligned_cols=154 Identities=12% Similarity=0.138 Sum_probs=85.1
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc---c------------CccceeEEecCCeEEEEEeCCCC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL---V------------GVTASVEWAGNEALVYITMDEIL 148 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~---~------------~~~~~~~WspDg~l~y~~~~~~~ 148 (648)
+++.+++++..| |..|..+ .+|+++|+.+........ . +.-.++++.+++..+|+...
T Consensus 571 ~gvavd~~~g~l-yVaDs~n---~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt--- 643 (1057)
T PLN02919 571 GKLAIDLLNNRL-FISDSNH---NRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADT--- 643 (1057)
T ss_pred ceEEEECCCCeE-EEEECCC---CeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeC---
Confidence 467888876655 4445433 588899987543321110 0 01245888888843455442
Q ss_pred CCceEEEEECCCCCCCcEEEEeec----------C------CCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCce
Q 006375 149 RPDKAWLHKLEADQSNDICLYHEK----------D------DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL 212 (648)
Q Consensus 149 ~~~~l~~~~l~~~~~~~~~~~~~~----------~------~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~ 212 (648)
....|..+++.++ ....+... . -..-.++.++|++..|+++. .....|+++|..++. .
T Consensus 644 ~n~~Ir~id~~~~---~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad--~~~~~I~v~d~~~g~-v 717 (1057)
T PLN02919 644 ENHALREIDFVNE---TVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAM--AGQHQIWEYNISDGV-T 717 (1057)
T ss_pred CCceEEEEecCCC---EEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEE--CCCCeEEEEECCCCe-E
Confidence 2345777776554 12112110 0 00113568888766776643 345679999987765 3
Q ss_pred eEeeec-----ccc-----------eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCC
Q 006375 213 RVLTPR-----VVG-----------VDTAASHRGNHFFITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 213 ~~l~~~-----~~~-----------~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 254 (648)
..+... ..+ ....++|+|++||+.... +.+|.++|+++
T Consensus 718 ~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~----n~~Irv~D~~t 771 (1057)
T PLN02919 718 RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSE----SSSIRALDLKT 771 (1057)
T ss_pred EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECC----CCeEEEEECCC
Confidence 322211 000 113488999988876442 35888888875
No 306
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=96.40 E-value=0.15 Score=52.49 Aligned_cols=143 Identities=10% Similarity=0.087 Sum_probs=86.2
Q ss_pred eEEeCCCCCEEEEEEeCCC----C--eEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEE
Q 006375 85 CFQVSPDNKLVAYAEDTKG----D--EIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G----~--e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~ 156 (648)
.+.|.+.|++|++...+.- + ...+|+++++.......+ ...+....++|.|++ ++..... -.+..+..+
T Consensus 227 qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g---~~pa~~s~~ 303 (561)
T COG5354 227 QLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISG---YMPASVSVF 303 (561)
T ss_pred EEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecccCCceeEEec---ccccceeec
Confidence 5789999999999865421 1 136899999975443333 345556679999999 7766552 223446666
Q ss_pred ECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeee-cccceee-eEeecCCEEE
Q 006375 157 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVDT-AASHRGNHFF 234 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~ 234 (648)
++.+. +.+-.+...- -...+||.++||++..-......+-++|..+. ...+.. ...+..+ .|||||..++
T Consensus 304 ~lr~N-----l~~~~Pe~~r-NT~~fsp~~r~il~agF~nl~gni~i~~~~~r--f~~~~~~~~~n~s~~~wspd~qF~~ 375 (561)
T COG5354 304 DLRGN-----LRFYFPEQKR-NTIFFSPHERYILFAGFDNLQGNIEIFDPAGR--FKVAGAFNGLNTSYCDWSPDGQFYD 375 (561)
T ss_pred ccccc-----eEEecCCccc-ccccccCcccEEEEecCCccccceEEeccCCc--eEEEEEeecCCceEeeccCCceEEE
Confidence 76654 2222211111 12347999999998654444556667777664 343422 2233344 5999998555
Q ss_pred EEec
Q 006375 235 ITRR 238 (648)
Q Consensus 235 ~~~~ 238 (648)
..+.
T Consensus 376 ~~~t 379 (561)
T COG5354 376 TDTT 379 (561)
T ss_pred ecCC
Confidence 4443
No 307
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=96.39 E-value=0.031 Score=56.88 Aligned_cols=72 Identities=14% Similarity=0.069 Sum_probs=49.8
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEEC
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l 158 (648)
-.+..+.||++|+.+.-+.- ...|.+||++||+.+.. ....+...+.+.||+ .+|+.+.- ..+|..+|+
T Consensus 259 k~Vrd~~~s~~g~~fLS~sf-----D~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~s----d~ki~~wDi 329 (503)
T KOG0282|consen 259 KPVRDASFNNCGTSFLSASF-----DRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGS----DKKIRQWDI 329 (503)
T ss_pred hhhhhhhccccCCeeeeeec-----ceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecC----CCcEEEEec
Confidence 35678899999998764432 34799999999997753 333445568899999 77776542 334666666
Q ss_pred CCC
Q 006375 159 EAD 161 (648)
Q Consensus 159 ~~~ 161 (648)
.++
T Consensus 330 Rs~ 332 (503)
T KOG0282|consen 330 RSG 332 (503)
T ss_pred cch
Confidence 665
No 308
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=96.34 E-value=0.057 Score=58.30 Aligned_cols=112 Identities=19% Similarity=0.156 Sum_probs=74.6
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc--cCccceeEEecCC-eEEEEEeCCCCCCceEEEEEC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l 158 (648)
.+....+-|+..|+| .|+...++++||+-+|..+..-. .+....+++||+| +|+- . .....|.++|+
T Consensus 537 DV~cv~FHPNs~Y~a-----TGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaS-g----~ed~~I~iWDl 606 (707)
T KOG0263|consen 537 DVDCVSFHPNSNYVA-----TGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLAS-G----DEDGLIKIWDL 606 (707)
T ss_pred ccceEEECCcccccc-----cCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEee-c----ccCCcEEEEEc
Confidence 455688999999887 34556799999999998765321 1224569999999 6643 2 33445888999
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCC
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 209 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~ 209 (648)
+++ .....+.++ .....++.+|.||..|+.. +.++.|.++|+...
T Consensus 607 ~~~--~~v~~l~~H-t~ti~SlsFS~dg~vLasg---g~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 607 ANG--SLVKQLKGH-TGTIYSLSFSRDGNVLASG---GADNSVRLWDLTKV 651 (707)
T ss_pred CCC--cchhhhhcc-cCceeEEEEecCCCEEEec---CCCCeEEEEEchhh
Confidence 886 233333233 3344578899999877643 34566777787653
No 309
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.29 E-value=0.013 Score=56.68 Aligned_cols=97 Identities=12% Similarity=0.036 Sum_probs=58.2
Q ss_pred cEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHH-HHHHHHcCCCCCC
Q 006375 407 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCTKE 485 (648)
Q Consensus 407 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~ 485 (648)
+.|+++|++.|. ...|...+..+...++.|..+..+|.+.. .....+++++.+. ++.+..... .+
T Consensus 1 ~~lf~~p~~gG~--~~~y~~la~~l~~~~~~v~~i~~~~~~~~----------~~~~~si~~la~~y~~~I~~~~~--~g 66 (229)
T PF00975_consen 1 RPLFCFPPAGGS--ASSYRPLARALPDDVIGVYGIEYPGRGDD----------EPPPDSIEELASRYAEAIRARQP--EG 66 (229)
T ss_dssp -EEEEESSTTCS--GGGGHHHHHHHTTTEEEEEEECSTTSCTT----------SHEESSHHHHHHHHHHHHHHHTS--SS
T ss_pred CeEEEEcCCccC--HHHHHHHHHhCCCCeEEEEEEecCCCCCC----------CCCCCCHHHHHHHHHHHhhhhCC--CC
Confidence 368889987663 23466656655544588999998876511 1112445555533 333333322 13
Q ss_pred eEEEEeeChhHHHHHHHHhh---CCCceeEEEecC
Q 006375 486 KLCIEGRSAGGLLIGAVLNM---RPDLFKAAVAAV 517 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~~---~p~~~~a~v~~~ 517 (648)
.+.++|+|+||.+|..+|.+ .-..+..+++..
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD 101 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEAGEEVSRLILID 101 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEES
T ss_pred CeeehccCccHHHHHHHHHHHHHhhhccCceEEec
Confidence 89999999999999887765 222355555554
No 310
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.24 E-value=0.12 Score=51.89 Aligned_cols=159 Identities=15% Similarity=0.058 Sum_probs=83.5
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-c---ccCccceeEEecCC---eEEEEEeCCCCCCce
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P---LVGVTASVEWAGNE---ALVYITMDEILRPDK 152 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~---~~~~~~~~~WspDg---~l~y~~~~~~~~~~~ 152 (648)
.-.+..+.|||||+.||+.... ...||++++|..+.. + -+..+....|+.|+ .++..........-.
T Consensus 186 ~~eV~DL~FS~dgk~lasig~d------~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~ 259 (398)
T KOG0771|consen 186 HAEVKDLDFSPDGKFLASIGAD------SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVR 259 (398)
T ss_pred cCccccceeCCCCcEEEEecCC------ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCcee
Confidence 3567889999999999998532 578999999965432 1 12235567788776 332222211111111
Q ss_pred EEEEECCCCCCCcEEEEee-cCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc---eeeeEee
Q 006375 153 AWLHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG---VDTAASH 228 (648)
Q Consensus 153 l~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~---~~~~~s~ 228 (648)
++...+-.+. .-...... ....-.....+|+||+++++.+.+ ..+-+++..+-+ ...+.++.-. ....|+|
T Consensus 260 ~~~~~~w~~~-~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~d---GsVai~~~~~lq-~~~~vk~aH~~~VT~ltF~P 334 (398)
T KOG0771|consen 260 LCDISLWSGS-NFLRLRKKIKRFKSISSLAVSDDGKFLALGTMD---GSVAIYDAKSLQ-RLQYVKEAHLGFVTGLTFSP 334 (398)
T ss_pred EEEeeeeccc-cccchhhhhhccCcceeEEEcCCCcEEEEeccC---CcEEEEEeceee-eeEeehhhheeeeeeEEEcC
Confidence 2222221110 00011000 011123356889999999987763 456666665543 3333343222 1245888
Q ss_pred cCCEEEEEeccCCCCCcEEEEEeC
Q 006375 229 RGNHFFITRRSDELFNSELLACPV 252 (648)
Q Consensus 229 dg~~l~~~~~~~~~~~~~l~~~~~ 252 (648)
|.+.+.=++.. ....|..+.+
T Consensus 335 dsr~~~svSs~---~~~~v~~l~v 355 (398)
T KOG0771|consen 335 DSRYLASVSSD---NEAAVTKLAV 355 (398)
T ss_pred CcCcccccccC---CceeEEEEee
Confidence 88766544332 2234555554
No 311
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=96.20 E-value=0.86 Score=44.13 Aligned_cols=176 Identities=16% Similarity=0.160 Sum_probs=90.7
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCC-CCeeec---cccCccceeEEecCC-eEEEEEeCCCCCCceEEEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-GTPVGK---PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~-g~~~~~---~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~ 156 (648)
+++.+.|||.-..++...+.+| +|++|+++. |...+. ...+....++|+.|| .+|-...+ .++-.+
T Consensus 29 sIS~l~FSP~~~~~~~A~SWD~----tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~D-----k~~k~w 99 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAAGSWDG----TVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCD-----KQAKLW 99 (347)
T ss_pred chheeEeccccCceEEecccCC----ceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccC-----CceEEE
Confidence 5778899996555555555555 788888875 454432 344445569999999 55443332 347788
Q ss_pred ECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEE
Q 006375 157 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFIT 236 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~ 236 (648)
+|.+++. ..+- -++...- ...|-+...+=.+...+ -+.-|..+|.....+...+ ...+..|..+---. ++.+
T Consensus 100 DL~S~Q~--~~v~-~Hd~pvk-t~~wv~~~~~~cl~TGS-WDKTlKfWD~R~~~pv~t~--~LPeRvYa~Dv~~p-m~vV 171 (347)
T KOG0647|consen 100 DLASGQV--SQVA-AHDAPVK-TCHWVPGMNYQCLVTGS-WDKTLKFWDTRSSNPVATL--QLPERVYAADVLYP-MAVV 171 (347)
T ss_pred EccCCCe--eeee-eccccee-EEEEecCCCcceeEecc-cccceeecccCCCCeeeee--eccceeeehhccCc-eeEE
Confidence 9988843 2232 2332221 34455544332222222 1245677777655411111 11222233222122 3333
Q ss_pred eccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCC
Q 006375 237 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID 278 (648)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (648)
... +..|.+++++.+..+...+...-...+..+..+.|
T Consensus 172 ata----~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d 209 (347)
T KOG0647|consen 172 ATA----ERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQD 209 (347)
T ss_pred Eec----CCcEEEEEcCCCcchhhhhcCcccceeeEEEEEec
Confidence 332 24688888865322211333344555666666654
No 312
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.19 E-value=0.12 Score=51.91 Aligned_cols=182 Identities=12% Similarity=0.079 Sum_probs=92.5
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc--cCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
..+++++||..||-. ++.-.++|++........... ..-...+.||||| .|++++.+ ...||-.+-+.
T Consensus 148 k~vaf~~~gs~latg-----g~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d----~~~VW~~~~g~ 218 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATG-----GTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD----SARVWSVNTGA 218 (398)
T ss_pred eEEEEcCCCCEeeec-----cccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC----ceEEEEeccCc
Confidence 567899999998853 334578899854443332211 1113359999999 88887654 23455443331
Q ss_pred CCCCcEEEEeecCCCeEEEEEeCCCC--cEEEEEEcccccc--EEEEEECCCCC---ceeEeeecccce-eeeEeecCCE
Q 006375 161 DQSNDICLYHEKDDIYSLGLQASESK--KFLFIASESKITR--FVFYLDVSKPE---ELRVLTPRVVGV-DTAASHRGNH 232 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~Dg--~~l~~~~~~~~~~--~l~~~dl~~~~---~~~~l~~~~~~~-~~~~s~dg~~ 232 (648)
.-+ .+..+ +.+.. +-...++.|+ ..+.+.+...... .++.+.+..+. ..+....+...+ ...+|.||+.
T Consensus 219 ~~a-~~t~~-~k~~~-~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf 295 (398)
T KOG0771|consen 219 ALA-RKTPF-SKDEM-FSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKF 295 (398)
T ss_pred hhh-hcCCc-ccchh-hhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcE
Confidence 110 11111 11221 2234555554 2333333332222 22222222221 122233333333 3569999999
Q ss_pred EEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEE
Q 006375 233 FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVY 283 (648)
Q Consensus 233 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 283 (648)
+++-++. ..+.+++..+.+.. .++++.....+.++.+.++.-++.
T Consensus 296 ~AlGT~d-----GsVai~~~~~lq~~-~~vk~aH~~~VT~ltF~Pdsr~~~ 340 (398)
T KOG0771|consen 296 LALGTMD-----GSVAIYDAKSLQRL-QYVKEAHLGFVTGLTFSPDSRYLA 340 (398)
T ss_pred EEEeccC-----CcEEEEEeceeeee-EeehhhheeeeeeEEEcCCcCccc
Confidence 9888885 24666666542211 266655555566777766644333
No 313
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.15 E-value=0.095 Score=47.84 Aligned_cols=101 Identities=17% Similarity=0.146 Sum_probs=61.2
Q ss_pred CCCCcEEEEecCCCCCC-CCCC-------------CchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCC--CCcH
Q 006375 403 DGSDPLLLYGYGSYEIC-NDPA-------------FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK--KNTF 466 (648)
Q Consensus 403 ~~~~P~vl~~hGg~~~~-~~~~-------------~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~--~~~~ 466 (648)
..+..++|++||..-.. ..+. --+.+..-...||-|++.|.- .-+.+++.-....+ ...+
T Consensus 98 t~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N----~~~kfye~k~np~kyirt~v 173 (297)
T KOG3967|consen 98 TNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPN----RERKFYEKKRNPQKYIRTPV 173 (297)
T ss_pred cCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCc----hhhhhhhcccCcchhccchH
Confidence 44556899999942111 1110 012223444569999998853 11234422111111 1356
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCc
Q 006375 467 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL 509 (648)
Q Consensus 467 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~ 509 (648)
+-+..+..+++.. ..+..|+++.||+||++++.++.+.|+.
T Consensus 174 eh~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~d 214 (297)
T KOG3967|consen 174 EHAKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPDD 214 (297)
T ss_pred HHHHHHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcCCc
Confidence 6666666666653 4678999999999999999999999873
No 314
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.15 E-value=1.4 Score=42.71 Aligned_cols=205 Identities=15% Similarity=0.182 Sum_probs=103.9
Q ss_pred CceEEEecccccCCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee-ccccCc--cceeEEecCCeEE
Q 006375 64 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGV--TASVEWAGNEALV 140 (648)
Q Consensus 64 ~~~~lld~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~-~~~~~~--~~~~~WspDg~l~ 140 (648)
.-++.++.-.++.-. -.++++.|.||.+.|+...+..+ .|+.++++ |+.+. ..+.+. .-++++..++.++
T Consensus 7 ~y~~~i~~~~l~g~~--~e~SGLTy~pd~~tLfaV~d~~~----~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~v 79 (248)
T PF06977_consen 7 DYRVVIEAKPLPGIL--DELSGLTYNPDTGTLFAVQDEPG----EIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYV 79 (248)
T ss_dssp T-EEEEEEEE-TT----S-EEEEEEETTTTEEEEEETTTT----EEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEE
T ss_pred CcEEEEeeeECCCcc--CCccccEEcCCCCeEEEEECCCC----EEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEE
Confidence 346667744443221 14889999999998888877655 68888975 55543 233332 3348888777554
Q ss_pred EEEeCCCCCCceEEEEECCCCCCC-cE---EEEe--ec--CCCeEEEEEeCCCCcEEEEEEccccccEEEEEEC--CCCC
Q 006375 141 YITMDEILRPDKAWLHKLEADQSN-DI---CLYH--EK--DDIYSLGLQASESKKFLFIASESKITRFVFYLDV--SKPE 210 (648)
Q Consensus 141 y~~~~~~~~~~~l~~~~l~~~~~~-~~---~~~~--~~--~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl--~~~~ 210 (648)
.+. .+..+|+.++++..... .. .-++ .. +..-+-+++|.+.++.+++. ..+....||-++. ....
T Consensus 80 l~~----Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~-kE~~P~~l~~~~~~~~~~~ 154 (248)
T PF06977_consen 80 LSE----ERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVA-KERKPKRLYEVNGFPGGFD 154 (248)
T ss_dssp EEE----TTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEE-EESSSEEEEEEESTT-SS-
T ss_pred EEE----cCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEE-eCCCChhhEEEccccCccc
Confidence 432 34567888888543211 11 1111 11 11224588999987777764 4445567888887 2222
Q ss_pred ceeEee--ecc-cc------eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcce-eEecC------CCCcccceEE
Q 006375 211 ELRVLT--PRV-VG------VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETT-VLIPH------RESVKLQDIQ 274 (648)
Q Consensus 211 ~~~~l~--~~~-~~------~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~------~~~~~~~~~~ 274 (648)
..... ... .. ....+.|..+.||+++... ..|..+|.++ .... .-+.. ..-.+.+++.
T Consensus 155 -~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es----~~l~~~d~~G-~~~~~~~L~~g~~gl~~~~~QpEGIa 228 (248)
T PF06977_consen 155 -LFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDES----RLLLELDRQG-RVVSSLSLDRGFHGLSKDIPQPEGIA 228 (248)
T ss_dssp --EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTT----TEEEEE-TT---EEEEEE-STTGGG-SS---SEEEEE
T ss_pred -eeeccccccccccceeccccceEEcCCCCeEEEEECCC----CeEEEECCCC-CEEEEEEeCCcccCcccccCCccEEE
Confidence 11111 000 00 1134678888899998862 4788888654 2222 12222 1123577888
Q ss_pred EeCCEEEEEEec
Q 006375 275 LFIDHLAVYERE 286 (648)
Q Consensus 275 ~~~~~l~~~~~~ 286 (648)
++.++-++..++
T Consensus 229 ~d~~G~LYIvsE 240 (248)
T PF06977_consen 229 FDPDGNLYIVSE 240 (248)
T ss_dssp E-TT--EEEEET
T ss_pred ECCCCCEEEEcC
Confidence 888765555554
No 315
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=95.99 E-value=0.61 Score=50.60 Aligned_cols=183 Identities=17% Similarity=0.198 Sum_probs=94.8
Q ss_pred EeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc--cCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCC--C
Q 006375 87 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA--D 161 (648)
Q Consensus 87 ~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~--~ 161 (648)
.+=|-+++|..... +| .|.|+|+++...+.... ++...+++-+||+ +++-.+.|. .-+.|-..+-. +
T Consensus 419 ~Fvpgd~~Iv~G~k-~G----el~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDk---tVkfWdf~l~~~~~ 490 (888)
T KOG0306|consen 419 KFVPGDRYIVLGTK-NG----ELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADK---TVKFWDFKLVVSVP 490 (888)
T ss_pred EecCCCceEEEecc-CC----ceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCc---EEEEEeEEEEeccC
Confidence 45566666655433 23 68888888877654322 3444557778999 765444332 22233221111 1
Q ss_pred CCCcE-------EEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-ceeeeEeecCCEE
Q 006375 162 QSNDI-------CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHF 233 (648)
Q Consensus 162 ~~~~~-------~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l 233 (648)
.++.+ .+.+-.+ -.+-+..||||++|++.--+ .+-.+|.+| +-+=..-|..+.- -....+|||++.+
T Consensus 491 gt~~k~lsl~~~rtLel~d--dvL~v~~Spdgk~LaVsLLd-nTVkVyflD--tlKFflsLYGHkLPV~smDIS~DSkli 565 (888)
T KOG0306|consen 491 GTQKKVLSLKHTRTLELED--DVLCVSVSPDGKLLAVSLLD-NTVKVYFLD--TLKFFLSLYGHKLPVLSMDISPDSKLI 565 (888)
T ss_pred cccceeeeeccceEEeccc--cEEEEEEcCCCcEEEEEecc-CeEEEEEec--ceeeeeeecccccceeEEeccCCcCeE
Confidence 11111 1111112 23457889999999986433 334566665 3220112333222 2234699999854
Q ss_pred EEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeC-CEEEEEEecCCe
Q 006375 234 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGL 289 (648)
Q Consensus 234 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~ 289 (648)
+ +... ..|.+++=+|... -.+-++.|+.. +..+.+.+ .++++...+++.
T Consensus 566 v-TgSA--DKnVKiWGLdFGD--CHKS~fAHdDS--vm~V~F~P~~~~FFt~gKD~k 615 (888)
T KOG0306|consen 566 V-TGSA--DKNVKIWGLDFGD--CHKSFFAHDDS--VMSVQFLPKTHLFFTCGKDGK 615 (888)
T ss_pred E-eccC--CCceEEeccccch--hhhhhhcccCc--eeEEEEcccceeEEEecCcce
Confidence 4 3332 2467777776643 12227777655 34444444 567777766653
No 316
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=95.96 E-value=1.9 Score=42.68 Aligned_cols=119 Identities=16% Similarity=0.135 Sum_probs=70.6
Q ss_pred eEEeCC-CCCEEEEEEeCCCCeEEEEEEEECCCCCeeec--cccC--ccceeEEecCCeEEEEEeCC-CCCCceEEEEEC
Q 006375 85 CFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVG--VTASVEWAGNEALVYITMDE-ILRPDKAWLHKL 158 (648)
Q Consensus 85 ~~~~SP-DG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~--~~~~~~WspDg~l~y~~~~~-~~~~~~l~~~~l 158 (648)
++..+| ++..+||... -| .-+.++|..+|+.... ..++ .++..+|||||+++|++.++ ......|-.++.
T Consensus 9 ~~a~~p~~~~avafaRR-PG---~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~ 84 (305)
T PF07433_consen 9 GVAAHPTRPEAVAFARR-PG---TFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDA 84 (305)
T ss_pred ceeeCCCCCeEEEEEeC-CC---cEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEEC
Confidence 577899 5666666654 45 3678999999987642 2233 36779999999666776544 223344556776
Q ss_pred CCCCCCcEEEEeecCCCe-EEEEEeCCCCcEEEEEEcc---c------------cccEEEEEECCCCC
Q 006375 159 EADQSNDICLYHEKDDIY-SLGLQASESKKFLFIASES---K------------ITRFVFYLDVSKPE 210 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~-~~~~~~s~Dg~~l~~~~~~---~------------~~~~l~~~dl~~~~ 210 (648)
... -..+-+-..... --.+.+.|||+.|++.-.- . -...|-++|..+++
T Consensus 85 ~~~---~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ 149 (305)
T PF07433_consen 85 ARG---YRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGA 149 (305)
T ss_pred cCC---cEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCc
Confidence 522 122222211111 1135789999988874211 0 02357778888776
No 317
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=95.95 E-value=0.61 Score=47.42 Aligned_cols=197 Identities=12% Similarity=0.127 Sum_probs=111.9
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee-----ecc-c---cCccceeEEecCC-eEEEEEeCCCCCCceEE
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-----GKP-L---VGVTASVEWAGNE-ALVYITMDEILRPDKAW 154 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~-----~~~-~---~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~ 154 (648)
++.||+.-.--.. ++++..+|.+||+...... +.. + ..+...++|.+-. .+|-... ....|.
T Consensus 182 glsWn~~~~g~Ll----s~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~----dd~~L~ 253 (422)
T KOG0264|consen 182 GLSWNRQQEGTLL----SGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVG----DDGKLM 253 (422)
T ss_pred ccccccccceeEe----eccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeec----CCCeEE
Confidence 3566664332222 2344568999998754331 111 1 2234558899887 5544332 234688
Q ss_pred EEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeEeeecccc-eeeeEeecCCE
Q 006375 155 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVG-VDTAASHRGNH 232 (648)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~-~~~~~s~dg~~ 232 (648)
++|+.+++.+......... .-...+++.|-+.+|+.+.+ .++.|.++|+..-. .+..+....+. ....|||+.+.
T Consensus 254 iwD~R~~~~~~~~~~~ah~-~~vn~~~fnp~~~~ilAT~S--~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~et 330 (422)
T KOG0264|consen 254 IWDTRSNTSKPSHSVKAHS-AEVNCVAFNPFNEFILATGS--ADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNET 330 (422)
T ss_pred EEEcCCCCCCCcccccccC-CceeEEEeCCCCCceEEecc--CCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCc
Confidence 8998864222222222222 22335678898888876544 34678889988765 22223333332 34569999998
Q ss_pred EEEEeccCCCCCcEEEEEeCCCCCcce-----------eEecCCCC-cccceEEEeCC--EEEEEEecCCeeEEEEEEcC
Q 006375 233 FFITRRSDELFNSELLACPVDNTSETT-----------VLIPHRES-VKLQDIQLFID--HLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 233 l~~~~~~~~~~~~~l~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~~~--~l~~~~~~~~~~~l~v~~~~ 298 (648)
++.++..+ .+|.+.|+..-++.+ .++.|..+ ..+.+|+|.++ +++....+++. +.||.+.
T Consensus 331 vLASSg~D----~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~--LqIW~~s 404 (422)
T KOG0264|consen 331 VLASSGTD----RRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNI--LQIWQMA 404 (422)
T ss_pred eeEecccC----CcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCce--EEEeecc
Confidence 87776542 478888875432221 14444433 35777888775 66667766654 5555554
No 318
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=95.94 E-value=2.3 Score=45.69 Aligned_cols=153 Identities=8% Similarity=0.065 Sum_probs=93.0
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc----cCccceeEEecCCeEEEEEeCCCCCCceEEEEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL----VGVTASVEWAGNEALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~----~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~ 157 (648)
.+..+++|.+.+.||.+.. .| .|-+|++..+--....+ .....+++|++.++||=... ...|..+|
T Consensus 27 ~I~slA~s~kS~~lAvsRt-~g----~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~-----sg~i~EwD 96 (691)
T KOG2048|consen 27 EIVSLAYSHKSNQLAVSRT-DG----NIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGL-----SGSITEWD 96 (691)
T ss_pred ceEEEEEeccCCceeeecc-CC----cEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecC-----CceEEEEe
Confidence 3567889999999998764 34 67788887754332222 22344699995558865433 34588888
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeEeeecccce--eeeEeecCCEEE
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGV--DTAASHRGNHFF 234 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~--~~~~s~dg~~l~ 234 (648)
+-+. +.+...+.. ..-..+.+..|-+..+.+.+.++ .++.++...++ +...+..++.+. ...|.++|..|+
T Consensus 97 l~~l--k~~~~~d~~-gg~IWsiai~p~~~~l~IgcddG---vl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~ 170 (691)
T KOG2048|consen 97 LHTL--KQKYNIDSN-GGAIWSIAINPENTILAIGCDDG---VLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIA 170 (691)
T ss_pred cccC--ceeEEecCC-CcceeEEEeCCccceEEeecCCc---eEEEEecCCceEEEEeecccccceEEEEEecCCccEEE
Confidence 8876 333333322 23334667788888888765543 67777766655 333444444332 345888887765
Q ss_pred EEeccCCCCCcEEEEEeCCCC
Q 006375 235 ITRRSDELFNSELLACPVDNT 255 (648)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~ 255 (648)
.-+- .+.|...|+..+
T Consensus 171 ~Gs~-----Dg~Iriwd~~~~ 186 (691)
T KOG2048|consen 171 GGSI-----DGVIRIWDVKSG 186 (691)
T ss_pred eccc-----CceEEEEEcCCC
Confidence 4333 356777777653
No 319
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.93 E-value=0.025 Score=56.32 Aligned_cols=110 Identities=18% Similarity=0.235 Sum_probs=64.8
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHCCC--EEEEEccCCCC-CCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCC
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGF--IFAIAQIRGGG-ELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 482 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~--~v~~~~~rG~g-~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 482 (648)
.-++|++|| |+.+....-...++...+.|+ +.+++-.+-.| -+|..+- ++.-..+-.++...+++|.+....
T Consensus 116 k~vlvFvHG-fNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~D----reS~~~Sr~aLe~~lr~La~~~~~ 190 (377)
T COG4782 116 KTVLVFVHG-FNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYD----RESTNYSRPALERLLRYLATDKPV 190 (377)
T ss_pred CeEEEEEcc-cCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccc----hhhhhhhHHHHHHHHHHHHhCCCC
Confidence 358999999 444333222222343334443 33333333222 1111110 111224668899999999987643
Q ss_pred CCCeEEEEeeChhHHHHHHHHhh----C----CCceeEEEecCCcccc
Q 006375 483 TKEKLCIEGRSAGGLLIGAVLNM----R----PDLFKAAVAAVPFVDV 522 (648)
Q Consensus 483 d~~~i~i~G~S~GG~l~~~~~~~----~----p~~~~a~v~~~~~~d~ 522 (648)
.+|.|++||||.++++.++.| . +..|+-+|+.+|=.|.
T Consensus 191 --~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 191 --KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred --ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 799999999999998876654 2 2257778888886664
No 320
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=95.92 E-value=0.35 Score=46.77 Aligned_cols=193 Identities=13% Similarity=0.228 Sum_probs=103.8
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCC------------CC-----eeeccc-cCc--cceeEEecCCeEEEEE
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET------------GT-----PVGKPL-VGV--TASVEWAGNEALVYIT 143 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~------------g~-----~~~~~~-~~~--~~~~~WspDg~l~y~~ 143 (648)
...++||||.++|- |+....|.++|++- |. ++..++ +.+ ...+.|.|-..|+.+.
T Consensus 116 R~aafs~DG~lvAT-----GsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~ 190 (430)
T KOG0640|consen 116 RAAAFSPDGSLVAT-----GSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISG 190 (430)
T ss_pred eeeeeCCCCcEEEc-----cCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEec
Confidence 45689999999883 55567899999861 11 111111 111 3458899988777765
Q ss_pred eCCCCCCceEEEEECCCCCC-CcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeee-cc--
Q 006375 144 MDEILRPDKAWLHKLEADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RV-- 219 (648)
Q Consensus 144 ~~~~~~~~~l~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~-~~-- 219 (648)
.++ .-|-+.++..... +.-.+|++..+ ...+++.|.|.+|++.... .-+.++|+.+-+ ...+ +.
T Consensus 191 srD----~tvKlFDfsK~saKrA~K~~qd~~~--vrsiSfHPsGefllvgTdH---p~~rlYdv~T~Q---cfvsanPd~ 258 (430)
T KOG0640|consen 191 SRD----NTVKLFDFSKTSAKRAFKVFQDTEP--VRSISFHPSGEFLLVGTDH---PTLRLYDVNTYQ---CFVSANPDD 258 (430)
T ss_pred cCC----CeEEEEecccHHHHHHHHHhhccce--eeeEeecCCCceEEEecCC---CceeEEecccee---EeeecCccc
Confidence 432 3366666654322 22234444322 3356789999999986443 335666776643 2221 11
Q ss_pred ---cce-eeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEE
Q 006375 220 ---VGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTY 295 (648)
Q Consensus 220 ---~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~ 295 (648)
+.+ ....|+.|+ ||++...++ .|-..|--...-.+.+-....+..+.+..+.+++.++... +-.+-+.+|
T Consensus 259 qht~ai~~V~Ys~t~~-lYvTaSkDG----~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsS-G~DS~vkLW 332 (430)
T KOG0640|consen 259 QHTGAITQVRYSSTGS-LYVTASKDG----AIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSS-GKDSTVKLW 332 (430)
T ss_pred ccccceeEEEecCCcc-EEEEeccCC----cEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeec-CCcceeeee
Confidence 111 233666665 777776643 3444442210101101112334457777787776655543 223456677
Q ss_pred EcCC
Q 006375 296 RLPA 299 (648)
Q Consensus 296 ~~~~ 299 (648)
.+.+
T Consensus 333 Ei~t 336 (430)
T KOG0640|consen 333 EIST 336 (430)
T ss_pred eecC
Confidence 7764
No 321
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=95.89 E-value=1.3 Score=45.43 Aligned_cols=196 Identities=14% Similarity=0.124 Sum_probs=100.3
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCcc-ceeEEecCCeEEEEEeCCCCCCceEEEEEC
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVT-ASVEWAGNEALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~-~~~~WspDg~l~y~~~~~~~~~~~l~~~~l 158 (648)
-.+.+++|+.+|.||+-.. . ..++.+||..+|+..+. ++.... -.+.|-.+..++-...+ ..++.+.+
T Consensus 277 gPI~slKWnk~G~yilS~~-v----D~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td-----~~i~V~kv 346 (524)
T KOG0273|consen 277 GPIFSLKWNKKGTYILSGG-V----DGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTD-----GCIHVCKV 346 (524)
T ss_pred CceEEEEEcCCCCEEEecc-C----CccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCC-----ceEEEEEe
Confidence 3567889999999987442 2 23778999999987653 333322 34889766666543321 22556666
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-ceeeeEeecCCE-----
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNH----- 232 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~----- 232 (648)
+.+. +...+..++. -...+.|.|-|..|+ ++++.++-.||-..-... ...+..... -....|||+|.-
T Consensus 347 ~~~~--P~~t~~GH~g-~V~alk~n~tg~LLa-S~SdD~TlkiWs~~~~~~--~~~l~~Hskei~t~~wsp~g~v~~n~~ 420 (524)
T KOG0273|consen 347 GEDR--PVKTFIGHHG-EVNALKWNPTGSLLA-SCSDDGTLKIWSMGQSNS--VHDLQAHSKEIYTIKWSPTGPVTSNPN 420 (524)
T ss_pred cCCC--cceeeecccC-ceEEEEECCCCceEE-EecCCCeeEeeecCCCcc--hhhhhhhccceeeEeecCCCCccCCCc
Confidence 6542 3333444433 234678999997654 445555556664432221 222222211 123458887652
Q ss_pred --EEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 233 --FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 233 --l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
+.+.+- ..+.-|...|+..+.....+..+++.+.-..+++++.+++. ...++ .+.+++..
T Consensus 421 ~~~~l~sa---s~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAs-Gs~dg--~V~iws~~ 482 (524)
T KOG0273|consen 421 MNLMLASA---SFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLAS-GSLDG--CVHIWSTK 482 (524)
T ss_pred CCceEEEe---ecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEe-cCCCC--eeEecccc
Confidence 111111 11234555666553333324456665444344444444432 22233 45555555
No 322
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=95.89 E-value=0.2 Score=51.28 Aligned_cols=150 Identities=12% Similarity=0.127 Sum_probs=86.9
Q ss_pred EEEeeEEeCC-CCCEEEEEEeCCCCeEEEEEEEECCC-CCeeeccccC---ccceeEEecCC-eEEEEEeCCCCCCceEE
Q 006375 81 YSVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIET-GTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAW 154 (648)
Q Consensus 81 ~~~~~~~~SP-DG~~la~~~~~~G~e~~~l~v~dl~~-g~~~~~~~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~l~ 154 (648)
-.++.++|.| .|.+|+ +... ...|+||++-+ ++.+. +.-+ ....+.|+++| .|+-.++|. -|.
T Consensus 215 kgvsai~~fp~~~hLlL-S~gm----D~~vklW~vy~~~~~lr-tf~gH~k~Vrd~~~s~~g~~fLS~sfD~-----~lK 283 (503)
T KOG0282|consen 215 KGVSAIQWFPKKGHLLL-SGGM----DGLVKLWNVYDDRRCLR-TFKGHRKPVRDASFNNCGTSFLSASFDR-----FLK 283 (503)
T ss_pred cccchhhhccceeeEEE-ecCC----CceEEEEEEecCcceeh-hhhcchhhhhhhhccccCCeeeeeecce-----eee
Confidence 3567889999 565554 3222 34889999876 44433 3322 24569999999 887666643 367
Q ss_pred EEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc--eeeeEeecCCE
Q 006375 155 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNH 232 (648)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~--~~~~~s~dg~~ 232 (648)
++|+.|++ -..-|....... -+.+.||+..+++... ...+|..+|+.+++ +..-..+..+ ....+-++|++
T Consensus 284 lwDtETG~--~~~~f~~~~~~~--cvkf~pd~~n~fl~G~--sd~ki~~wDiRs~k-vvqeYd~hLg~i~~i~F~~~g~r 356 (503)
T KOG0282|consen 284 LWDTETGQ--VLSRFHLDKVPT--CVKFHPDNQNIFLVGG--SDKKIRQWDIRSGK-VVQEYDRHLGAILDITFVDEGRR 356 (503)
T ss_pred eeccccce--EEEEEecCCCce--eeecCCCCCcEEEEec--CCCcEEEEeccchH-HHHHHHhhhhheeeeEEccCCce
Confidence 78888883 333343332222 3467888877766433 34678999999887 3222222212 12346677776
Q ss_pred EEEEeccCCCCCcEEEEEe
Q 006375 233 FFITRRSDELFNSELLACP 251 (648)
Q Consensus 233 l~~~~~~~~~~~~~l~~~~ 251 (648)
++-+++. ...+++-..
T Consensus 357 FissSDd---ks~riWe~~ 372 (503)
T KOG0282|consen 357 FISSSDD---KSVRIWENR 372 (503)
T ss_pred EeeeccC---ccEEEEEcC
Confidence 5554443 234554433
No 323
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=95.88 E-value=0.059 Score=53.01 Aligned_cols=170 Identities=14% Similarity=0.139 Sum_probs=102.8
Q ss_pred EEEecccccC----CCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC-ccceeEEecCCeEEE
Q 006375 67 LILDENVKAE----GRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNEALVY 141 (648)
Q Consensus 67 ~lld~n~~~~----~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~-~~~~~~WspDg~l~y 141 (648)
-++|++-..+ .-|+-.+..++++|-..-|.-+... ...|.++|+.++.++...+-. ....++|+| ..+-|
T Consensus 170 ~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~s----DrsIvLyD~R~~~Pl~KVi~~mRTN~IswnP-eafnF 244 (433)
T KOG0268|consen 170 DIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCAS----DRSIVLYDLRQASPLKKVILTMRTNTICWNP-EAFNF 244 (433)
T ss_pred eecccccCCccceeecCCCceeEEecCCCcchheeeecc----CCceEEEecccCCccceeeeeccccceecCc-cccce
Confidence 3577643321 1245567788889987766655422 236899999999888643332 245699999 53334
Q ss_pred EEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEe--eecc
Q 006375 142 ITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL--TPRV 219 (648)
Q Consensus 142 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l--~~~~ 219 (648)
+.. ++.+.+|.+|+.-- .....++... ..-.+++.+||-|+-++-.+- +..|.++....+. -+.+ +.+.
T Consensus 245 ~~a---~ED~nlY~~DmR~l-~~p~~v~~dh-vsAV~dVdfsptG~Efvsgsy---DksIRIf~~~~~~-SRdiYhtkRM 315 (433)
T KOG0268|consen 245 VAA---NEDHNLYTYDMRNL-SRPLNVHKDH-VSAVMDVDFSPTGQEFVSGSY---DKSIRIFPVNHGH-SRDIYHTKRM 315 (433)
T ss_pred eec---cccccceehhhhhh-cccchhhccc-ceeEEEeccCCCcchhccccc---cceEEEeecCCCc-chhhhhHhhh
Confidence 443 45667999887654 2334444433 234568899999998874332 3456677666654 3333 2343
Q ss_pred ccee-eeEeecCCEEEEEeccCCCCCcEEEEEeCC
Q 006375 220 VGVD-TAASHRGNHFFITRRSDELFNSELLACPVD 253 (648)
Q Consensus 220 ~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 253 (648)
..+. .-||.|.++++--++ ..|.+|++....
T Consensus 316 q~V~~Vk~S~Dskyi~SGSd---d~nvRlWka~As 347 (433)
T KOG0268|consen 316 QHVFCVKYSMDSKYIISGSD---DGNVRLWKAKAS 347 (433)
T ss_pred heeeEEEEeccccEEEecCC---Ccceeeeecchh
Confidence 3333 349999885543333 367888887654
No 324
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=95.85 E-value=0.37 Score=48.68 Aligned_cols=135 Identities=14% Similarity=0.117 Sum_probs=81.3
Q ss_pred EEEEEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCC-CchhHHHHHHCCCEEEEEccCCCC-CCChhh-
Q 006375 377 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQIRGGG-ELGRQW- 453 (648)
Q Consensus 377 ~~~~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~~~rG~g-~~g~~~- 453 (648)
+.+++.. ++.++.+. +.|... ..+.-+||++||-......+. .......|.+.||..+.+....-- ..-...
T Consensus 63 e~~~L~~-~~~~flaL-~~~~~~---~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~ 137 (310)
T PF12048_consen 63 EVQWLQA-GEERFLAL-WRPANS---AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRA 137 (310)
T ss_pred hcEEeec-CCEEEEEE-EecccC---CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccC
Confidence 3444543 55556554 555443 344568999999544333222 233456888899999998876510 000000
Q ss_pred ------hhcccc---------------------cCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhC
Q 006375 454 ------YENGKF---------------------LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 506 (648)
Q Consensus 454 ------~~~~~~---------------------~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~ 506 (648)
..++.. ......+.-+.+++.++..++. .+|+++|++.|+++++.++...
T Consensus 138 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~---~~ivlIg~G~gA~~~~~~la~~ 214 (310)
T PF12048_consen 138 TEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG---KNIVLIGHGTGAGWAARYLAEK 214 (310)
T ss_pred CCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC---ceEEEEEeChhHHHHHHHHhcC
Confidence 000000 0011334566677778777764 5699999999999999999887
Q ss_pred CC-ceeEEEecCCc
Q 006375 507 PD-LFKAAVAAVPF 519 (648)
Q Consensus 507 p~-~~~a~v~~~~~ 519 (648)
+. .+.+.|+..+.
T Consensus 215 ~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 215 PPPMPDALVLINAY 228 (310)
T ss_pred CCcccCeEEEEeCC
Confidence 64 46788887764
No 325
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=95.77 E-value=0.078 Score=56.53 Aligned_cols=116 Identities=16% Similarity=0.169 Sum_probs=70.5
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC---ccceeEEecCC-eEEEEEeCCCCCCceEEE
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWL 155 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~l~~ 155 (648)
.+.+.....||+|+.||=+...+--+...|++++..+=.... .+.+ ....++||||| .|+-++.| |...||-
T Consensus 525 GyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~-~L~~HsLTVT~l~FSpdg~~LLsvsRD---Rt~sl~~ 600 (764)
T KOG1063|consen 525 GYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQ-ELEGHSLTVTRLAFSPDGRYLLSVSRD---RTVSLYE 600 (764)
T ss_pred ceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhh-eecccceEEEEEEECCCCcEEEEeecC---ceEEeee
Confidence 378889999999999998876666778899999976533322 2222 13569999999 66554443 3344444
Q ss_pred EECCCCCCCcEEEE--eecCCCeEEEEEeCCCCcEEEEEEccccccEEEE
Q 006375 156 HKLEADQSNDICLY--HEKDDIYSLGLQASESKKFLFIASESKITRFVFY 203 (648)
Q Consensus 156 ~~l~~~~~~~~~~~--~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~ 203 (648)
. ..+. .+..-| .....+...+..|+||++++ ++++++-.-.+|.
T Consensus 601 ~--~~~~-~~e~~fa~~k~HtRIIWdcsW~pde~~F-aTaSRDK~VkVW~ 646 (764)
T KOG1063|consen 601 V--QEDI-KDEFRFACLKAHTRIIWDCSWSPDEKYF-ATASRDKKVKVWE 646 (764)
T ss_pred e--eccc-chhhhhccccccceEEEEcccCccccee-EEecCCceEEEEe
Confidence 3 2211 111112 22234566688999999984 3444432233443
No 326
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=95.73 E-value=0.25 Score=50.69 Aligned_cols=115 Identities=17% Similarity=0.194 Sum_probs=83.5
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec--cccC-ccceeEEecCC-eEEEEEeCCCCCCceEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVG-VTASVEWAGNE-ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~-~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~ 156 (648)
-.+.-+.+||.-|.+.-+....| .+.+||+.+..+.-. .... ...+++|+|-+ .|+.+- +...+|+.+
T Consensus 165 qsvRll~ys~skr~lL~~asd~G----~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsV----G~Dkki~~y 236 (673)
T KOG4378|consen 165 QSVRLLRYSPSKRFLLSIASDKG----AVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSV----GYDKKINIY 236 (673)
T ss_pred CeEEEeecccccceeeEeeccCC----eEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEe----cccceEEEe
Confidence 34567889999999998887777 788899987665421 1111 24569999999 665442 445679999
Q ss_pred ECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 157 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
|+++....+.+.++.+ +..++++++|.+|++... ..+|+.+|+...+
T Consensus 237 D~~s~~s~~~l~y~~P----lstvaf~~~G~~L~aG~s---~G~~i~YD~R~~k 283 (673)
T KOG4378|consen 237 DIRSQASTDRLTYSHP----LSTVAFSECGTYLCAGNS---KGELIAYDMRSTK 283 (673)
T ss_pred ecccccccceeeecCC----cceeeecCCceEEEeecC---CceEEEEecccCC
Confidence 9998877777777654 235788999988876433 3689999998765
No 327
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=95.71 E-value=0.75 Score=45.72 Aligned_cols=134 Identities=13% Similarity=0.081 Sum_probs=80.3
Q ss_pred EEEEEECCCCCeeec--cc-cCccceeEEecC--C-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEE
Q 006375 108 TVYVIDIETGTPVGK--PL-VGVTASVEWAGN--E-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQ 181 (648)
Q Consensus 108 ~l~v~dl~~g~~~~~--~~-~~~~~~~~WspD--g-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 181 (648)
.|||+|+.+.+.+.. +. ++..+-.+.||. + +++|-.. ....+|+++++.+- +.......++... .-++
T Consensus 107 ~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s---~t~GdV~l~d~~nl--~~v~~I~aH~~~l-Aala 180 (391)
T KOG2110|consen 107 SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGS---TTSGDVVLFDTINL--QPVNTINAHKGPL-AALA 180 (391)
T ss_pred cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCC---CCCceEEEEEcccc--eeeeEEEecCCce-eEEE
Confidence 599999999987742 22 344444566654 4 7877543 34677999988765 3344444444333 3568
Q ss_pred eCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc---eeeeEeecCCEEEEEeccCCCCCcEEEEEeC
Q 006375 182 ASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG---VDTAASHRGNHFFITRRSDELFNSELLACPV 252 (648)
Q Consensus 182 ~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~---~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 252 (648)
+++||..|+-.+. + ..-|.++...+++.+..+..+..- ....|++|+..|..+++. ...+|++++.
T Consensus 181 fs~~G~llATASe-K-GTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~T---eTVHiFKL~~ 249 (391)
T KOG2110|consen 181 FSPDGTLLATASE-K-GTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNT---ETVHIFKLEK 249 (391)
T ss_pred ECCCCCEEEEecc-C-ceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCC---CeEEEEEecc
Confidence 9999998874333 2 345666677766512222111111 123489999977777765 3467777654
No 328
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=95.70 E-value=0.87 Score=45.76 Aligned_cols=153 Identities=10% Similarity=0.040 Sum_probs=78.0
Q ss_pred EEEeeEEeCCCCCEEEEEEe-----CC-CCeEEEEEEEECCCCCeeeccc-cCccceeEEecCC-eEEEEEeCCCCCCce
Q 006375 81 YSVGCFQVSPDNKLVAYAED-----TK-GDEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITMDEILRPDK 152 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~-----~~-G~e~~~l~v~dl~~g~~~~~~~-~~~~~~~~WspDg-~l~y~~~~~~~~~~~ 152 (648)
.+....++.|||++.+=+.. .. ..+.-.||.+|..++..+.... -.+..+++||||+ .+|++ . ....+
T Consensus 111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~a-D---T~~~~ 186 (307)
T COG3386 111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVA-D---TPANR 186 (307)
T ss_pred CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEE-e---CCCCe
Confidence 44456688899986443333 11 1223368888875544443221 1234569999999 66554 3 22356
Q ss_pred EEEEECCC--CC-CCcE-EEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEee-eccc-ceeeeE
Q 006375 153 AWLHKLEA--DQ-SNDI-CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVV-GVDTAA 226 (648)
Q Consensus 153 l~~~~l~~--~~-~~~~-~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~-~~~~-~~~~~~ 226 (648)
+++++++. +. .... .++....+..--+.....||..-+ +.......|-+++.++.. ...+. +... ..-.+-
T Consensus 187 i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~--~a~~~g~~v~~~~pdG~l-~~~i~lP~~~~t~~~Fg 263 (307)
T COG3386 187 IHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWV--AAVWGGGRVVRFNPDGKL-LGEIKLPVKRPTNPAFG 263 (307)
T ss_pred EEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEE--ecccCCceEEEECCCCcE-EEEEECCCCCCccceEe
Confidence 88887752 11 1111 222111222222445556664322 233334578888877332 22222 2111 112345
Q ss_pred eecCCEEEEEeccC
Q 006375 227 SHRGNHFFITRRSD 240 (648)
Q Consensus 227 s~dg~~l~~~~~~~ 240 (648)
.++.+.||+++...
T Consensus 264 G~~~~~L~iTs~~~ 277 (307)
T COG3386 264 GPDLNTLYITSARS 277 (307)
T ss_pred CCCcCEEEEEecCC
Confidence 67789999998874
No 329
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=95.62 E-value=0.042 Score=56.75 Aligned_cols=56 Identities=27% Similarity=0.414 Sum_probs=41.1
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec--cccCccceeEEecCC-eEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE-ALVY 141 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~~~~~~WspDg-~l~y 141 (648)
..+..+.+||||++||..+. +| -|+|+|.++.+.+-. ...+-...++||||| .|+-
T Consensus 291 g~in~f~FS~DG~~LA~VSq-DG----fLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvt 349 (636)
T KOG2394|consen 291 GSINEFAFSPDGKYLATVSQ-DG----FLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVT 349 (636)
T ss_pred ccccceeEcCCCceEEEEec-Cc----eEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEe
Confidence 37788999999999998865 34 789999988776531 223334458999999 6644
No 330
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=95.55 E-value=0.033 Score=36.60 Aligned_cols=28 Identities=11% Similarity=0.081 Sum_probs=22.4
Q ss_pred eEEEEEeCCCCcEEEEEEccc--cccEEEE
Q 006375 176 YSLGLQASESKKFLFIASESK--ITRFVFY 203 (648)
Q Consensus 176 ~~~~~~~s~Dg~~l~~~~~~~--~~~~l~~ 203 (648)
....+.|||||++|+|.+... +..+||+
T Consensus 10 ~~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 10 DDGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp SEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred cccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 445789999999999999887 7788885
No 331
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=95.51 E-value=0.18 Score=51.81 Aligned_cols=131 Identities=21% Similarity=0.238 Sum_probs=82.0
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc---ccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP---LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~---~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
..+.+|||.| |+|+.-.+| +|.|||+.....+.+. .++ .+.+.-++|| .|+-...| .-|..+|+.
T Consensus 513 yALa~spDak-vcFsccsdG----nI~vwDLhnq~~VrqfqGhtDG-ascIdis~dGtklWTGGlD-----ntvRcWDlr 581 (705)
T KOG0639|consen 513 YALAISPDAK-VCFSCCSDG----NIAVWDLHNQTLVRQFQGHTDG-ASCIDISKDGTKLWTGGLD-----NTVRCWDLR 581 (705)
T ss_pred hhhhcCCccc-eeeeeccCC----cEEEEEcccceeeecccCCCCC-ceeEEecCCCceeecCCCc-----cceeehhhh
Confidence 4578899997 688877777 7999999877655431 222 3458889999 77654333 336677777
Q ss_pred CCCCCcEEEEeecC-CCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc-eeeeEeecCCEEE
Q 006375 160 ADQSNDICLYHEKD-DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFF 234 (648)
Q Consensus 160 ~~~~~~~~~~~~~~-~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~ 234 (648)
++. ... +.+ ..-.+++...|.+.|+++... ++.++++...+.+ .-.|...+.- ....|++-|+|++
T Consensus 582 egr--qlq---qhdF~SQIfSLg~cP~~dWlavGMe---ns~vevlh~skp~-kyqlhlheScVLSlKFa~cGkwfv 649 (705)
T KOG0639|consen 582 EGR--QLQ---QHDFSSQIFSLGYCPTGDWLAVGME---NSNVEVLHTSKPE-KYQLHLHESCVLSLKFAYCGKWFV 649 (705)
T ss_pred hhh--hhh---hhhhhhhheecccCCCccceeeecc---cCcEEEEecCCcc-ceeecccccEEEEEEecccCceee
Confidence 652 111 112 122346678999999998654 3568888877665 2233322221 1234888898643
No 332
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=95.49 E-value=2.1 Score=39.61 Aligned_cols=68 Identities=9% Similarity=0.156 Sum_probs=41.0
Q ss_pred EEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceee-eEeecCCEEEEEeccCCCCCcEEEEEeCCC
Q 006375 179 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 179 ~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 254 (648)
.+...|.||.|+ ....++.-.++|+.++..++...+....+.. .+||...++ ++-. ...+|-+.|+.+
T Consensus 236 av~vdpsgrll~---sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yl--lt~s---yd~~ikltdlqg 304 (350)
T KOG0641|consen 236 AVAVDPSGRLLA---SGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYL--LTCS---YDMKIKLTDLQG 304 (350)
T ss_pred EEEECCCcceee---eccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEE--EEec---ccceEEEeeccc
Confidence 456778887665 2233455667788887645566666555543 488855433 3322 224788888875
No 333
>PLN02209 serine carboxypeptidase
Probab=95.48 E-value=0.073 Score=56.33 Aligned_cols=134 Identities=10% Similarity=0.089 Sum_probs=73.7
Q ss_pred CCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchh---------------------HHHHHHCCCEEEEEcc
Q 006375 385 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSS---------------------RLSLLDRGFIFAIAQI 443 (648)
Q Consensus 385 ~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~---------------------~~~l~~~G~~v~~~~~ 443 (648)
.+..+-.|++.... .....|+|+++-||+|.+....+-.+ -..|.+ -..++.+|.
T Consensus 50 ~~~~lf~~f~es~~---~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~anllfiDq 125 (437)
T PLN02209 50 ENVQFFYYFIKSDK---NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTK-TANIIFLDQ 125 (437)
T ss_pred CCeEEEEEEEecCC---CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhh-cCcEEEecC
Confidence 35556666554332 23457999999999887643311100 013333 356888887
Q ss_pred CCCCCCChhhhhcccccCCCCcHhHHHHHHHHHH-HcCCCCCCeEEEEeeChhHHHH----HHHHhhC-----C-CceeE
Q 006375 444 RGGGELGRQWYENGKFLKKKNTFTDFIACAEYLI-KNCYCTKEKLCIEGRSAGGLLI----GAVLNMR-----P-DLFKA 512 (648)
Q Consensus 444 rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~-~~~~~d~~~i~i~G~S~GG~l~----~~~~~~~-----p-~~~~a 512 (648)
+-+.|+...-..... .......+|+...++... ....-....+.|+|.|+||.-+ ..+..+. + =-+++
T Consensus 126 PvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~G 204 (437)
T PLN02209 126 PVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQG 204 (437)
T ss_pred CCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeee
Confidence 766665422111111 111123355555555333 3333344679999999999843 3333222 1 14789
Q ss_pred EEecCCccccc
Q 006375 513 AVAAVPFVDVL 523 (648)
Q Consensus 513 ~v~~~~~~d~~ 523 (648)
+++..|++|..
T Consensus 205 i~igng~td~~ 215 (437)
T PLN02209 205 YVLGNPITHIE 215 (437)
T ss_pred EEecCcccChh
Confidence 99999988853
No 334
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=95.47 E-value=0.64 Score=45.02 Aligned_cols=118 Identities=12% Similarity=0.100 Sum_probs=73.9
Q ss_pred CcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc-----ccCccceeEEecCCeEEEEEeCCCCCCceE
Q 006375 79 GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-----LVGVTASVEWAGNEALVYITMDEILRPDKA 153 (648)
Q Consensus 79 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~-----~~~~~~~~~WspDg~l~y~~~~~~~~~~~l 153 (648)
+...+..+++-|.|.+|+...+ ...++++|++|-+-.... -.+....+.+|+.|.+|.+...+ .. |
T Consensus 215 d~~~vrsiSfHPsGefllvgTd-----Hp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkD--G~--I 285 (430)
T KOG0640|consen 215 DTEPVRSISFHPSGEFLLVGTD-----HPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKD--GA--I 285 (430)
T ss_pred ccceeeeEeecCCCceEEEecC-----CCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccC--Cc--E
Confidence 4567889999999999997544 678999999986643211 12234458889999887776533 22 3
Q ss_pred EEEECCCCCCCcEEEE-eecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 154 WLHKLEADQSNDICLY-HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 154 ~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
.+++=-++ .=...+ ..++..-..+..++++||||+ .++-++-++++.+.++.
T Consensus 286 klwDGVS~--rCv~t~~~AH~gsevcSa~Ftkn~kyiL---sSG~DS~vkLWEi~t~R 338 (430)
T KOG0640|consen 286 KLWDGVSN--RCVRTIGNAHGGSEVCSAVFTKNGKYIL---SSGKDSTVKLWEISTGR 338 (430)
T ss_pred EeeccccH--HHHHHHHhhcCCceeeeEEEccCCeEEe---ecCCcceeeeeeecCCc
Confidence 33331111 111111 123344456778999999997 33334667777777775
No 335
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=95.33 E-value=0.67 Score=50.87 Aligned_cols=58 Identities=14% Similarity=0.067 Sum_probs=38.6
Q ss_pred EEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEEec
Q 006375 178 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRR 238 (648)
Q Consensus 178 ~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~ 238 (648)
.+..+|||||||+..+.+ +.|.++|+-++.-+.-+.-...-....+||.|+.|+-+.-
T Consensus 580 td~~FS~DgrWlisasmD---~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hv 637 (910)
T KOG1539|consen 580 TDMTFSPDGRWLISASMD---STIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHV 637 (910)
T ss_pred eeeEeCCCCcEEEEeecC---CcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEe
Confidence 367899999999976654 4588899988761222222222234568999997766554
No 336
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=95.32 E-value=3.4 Score=41.02 Aligned_cols=191 Identities=14% Similarity=0.050 Sum_probs=99.1
Q ss_pred CCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc--ccCc-cceeEEecCC-eEEEEEe-----CCC-
Q 006375 78 RGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGV-TASVEWAGNE-ALVYITM-----DEI- 147 (648)
Q Consensus 78 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~--~~~~-~~~~~WspDg-~l~y~~~-----~~~- 147 (648)
.+....+.-.+||||++|.-+.+.-.+.+-.|-|+|++.+=.+... ..++ -..+.|.||| +|+...- ++.
T Consensus 48 ~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~G 127 (305)
T PF07433_consen 48 PGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSG 127 (305)
T ss_pred CCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccC
Confidence 4566777889999999987776655555779999999844333322 2333 3458899999 8866421 111
Q ss_pred --------CCCceEEEEECCCCCCCcEEEEeecCCCe-EEEEEeCCCCcEEEEEEcccc---c-cEEEEEECCCCCceeE
Q 006375 148 --------LRPDKAWLHKLEADQSNDICLYHEKDDIY-SLGLQASESKKFLFIASESKI---T-RFVFYLDVSKPEELRV 214 (648)
Q Consensus 148 --------~~~~~l~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~s~Dg~~l~~~~~~~~---~-~~l~~~dl~~~~~~~~ 214 (648)
.++. |.+++..++.--++..+...+... .--+++.+||.-++-.-.... . .=|.+.+... . ++.
T Consensus 128 R~kLNl~tM~ps-L~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~-~-~~~ 204 (305)
T PF07433_consen 128 RAKLNLDTMQPS-LVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGG-A-LRL 204 (305)
T ss_pred ceecChhhcCCc-eEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCC-c-cee
Confidence 1122 444555554211221121111111 123577888854433222211 1 2233333322 1 333
Q ss_pred eeec------ccc--eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCE
Q 006375 215 LTPR------VVG--VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH 279 (648)
Q Consensus 215 l~~~------~~~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (648)
+... ..+ ....++.+|+.+++++.+. ..+.+.|..+. + ++....-....++...++.
T Consensus 205 ~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrG----g~~~~~d~~tg---~-~~~~~~l~D~cGva~~~~~ 269 (305)
T PF07433_consen 205 LPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRG----GRVAVWDAATG---R-LLGSVPLPDACGVAPTDDG 269 (305)
T ss_pred ccCChHHHHhhCCceEEEEEeCCCCEEEEECCCC----CEEEEEECCCC---C-EeeccccCceeeeeecCCc
Confidence 3211 111 1234778888888888773 35666777652 2 2222222235667776666
No 337
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=95.32 E-value=3 Score=40.47 Aligned_cols=116 Identities=12% Similarity=0.051 Sum_probs=67.0
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee---eccccCccceeEEecCCeEEEEEeCCCCCCceEEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV---GKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~---~~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~ 157 (648)
-.+....|+|||..+|= +|. ...|++|++.+...- ..--.++...+.|++|+..+|+...+ ..|+.+|
T Consensus 48 geI~~~~F~P~gs~~aS----gG~-Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtD----k~v~~wD 118 (338)
T KOG0265|consen 48 GEIYTIKFHPDGSCFAS----GGS-DRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTD----KTVRGWD 118 (338)
T ss_pred ceEEEEEECCCCCeEee----cCC-cceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCC----ceEEEEe
Confidence 45677899999998873 344 458999997654322 11112345669999999444444322 3588899
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
+.+++. ..-+.. +..+.-....+.-|..++.+.. .+..+.++|..+.+
T Consensus 119 ~~tG~~--~rk~k~-h~~~vNs~~p~rrg~~lv~Sgs--dD~t~kl~D~R~k~ 166 (338)
T KOG0265|consen 119 AETGKR--IRKHKG-HTSFVNSLDPSRRGPQLVCSGS--DDGTLKLWDIRKKE 166 (338)
T ss_pred ccccee--eehhcc-ccceeeecCccccCCeEEEecC--CCceEEEEeecccc
Confidence 988732 222222 2334333333444555554333 34556667777554
No 338
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=95.27 E-value=6.2 Score=46.30 Aligned_cols=99 Identities=12% Similarity=0.112 Sum_probs=58.5
Q ss_pred EEEEEeCCCCcEEEEEEcc--cc-ccEEEEEECCCCCceeEeeeccccee--eeEeecCCEEEEEeccCCCCCcEEEEEe
Q 006375 177 SLGLQASESKKFLFIASES--KI-TRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITRRSDELFNSELLACP 251 (648)
Q Consensus 177 ~~~~~~s~Dg~~l~~~~~~--~~-~~~l~~~dl~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 251 (648)
...++|-.||+|+++++-. .+ ...+.+++-+ |+ +.-......+.+ ..|-|.|..|+-.... ..+..|.-..
T Consensus 212 ~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~-L~stSE~v~gLe~~l~WrPsG~lIA~~q~~--~~~~~VvFfE 287 (928)
T PF04762_consen 212 RVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GE-LQSTSEPVDGLEGALSWRPSGNLIASSQRL--PDRHDVVFFE 287 (928)
T ss_pred ceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ce-EEeccccCCCccCCccCCCCCCEEEEEEEc--CCCcEEEEEe
Confidence 3468999999999998753 23 4667777766 33 444444334433 4699999977766653 2335566555
Q ss_pred CCCCCcceeEecC-CCCcccceEEEeCCE
Q 006375 252 VDNTSETTVLIPH-RESVKLQDIQLFIDH 279 (648)
Q Consensus 252 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 279 (648)
-++.......++. .....+..+.|..+.
T Consensus 288 rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds 316 (928)
T PF04762_consen 288 RNGLRHGEFTLRFDPEEEKVIELAWNSDS 316 (928)
T ss_pred cCCcEeeeEecCCCCCCceeeEEEECCCC
Confidence 4442222222332 234456778887764
No 339
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=95.26 E-value=0.75 Score=45.04 Aligned_cols=62 Identities=26% Similarity=0.453 Sum_probs=40.3
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECC---CCCee--ec--cc----cCccceeEEecCCeEEEEEeC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE---TGTPV--GK--PL----VGVTASVEWAGNEALVYITMD 145 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~---~g~~~--~~--~~----~~~~~~~~WspDg~l~y~~~~ 145 (648)
.+..+++||||.++|+.....+. .+|+|.-+. .|... .. .. ......++|++|++|++....
T Consensus 113 ~I~~l~vSpDG~RvA~v~~~~~~--~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~ 185 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVVEDGGG--GRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRS 185 (253)
T ss_pred ceEEEEECCCCcEEEEEEecCCC--CeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCC
Confidence 78899999999999999977664 445555432 23111 11 11 112346999999987776653
No 340
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.21 E-value=0.044 Score=52.30 Aligned_cols=74 Identities=19% Similarity=0.167 Sum_probs=44.7
Q ss_pred cCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCC----CceeEEEecC
Q 006375 443 IRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP----DLFKAAVAAV 517 (648)
Q Consensus 443 ~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p----~~~~a~v~~~ 517 (648)
+||.-.....|.+....... ........|++|+...-.-.++.|.+.|||.||.+|.+++...+ +++..+....
T Consensus 43 FRGTd~t~~~W~ed~~~~~~-~~~~~q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fD 120 (224)
T PF11187_consen 43 FRGTDDTLVDWKEDFNMSFQ-DETPQQKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFD 120 (224)
T ss_pred EECCCCchhhHHHHHHhhcC-CCCHHHHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEee
Confidence 36665445566654333221 12234456777776542223457999999999999998888743 2455555443
No 341
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=95.20 E-value=0.31 Score=47.39 Aligned_cols=46 Identities=17% Similarity=0.217 Sum_probs=38.3
Q ss_pred CCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccC
Q 006375 566 NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 615 (648)
Q Consensus 566 ~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~ 615 (648)
.+| -|.+.+.+|..|+..+.+++++..++.|.++....+. ++.|..
T Consensus 178 ~~p-~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~---~S~HV~ 223 (240)
T PF05705_consen 178 RCP-RLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFE---DSPHVA 223 (240)
T ss_pred CCC-eEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCC---CCchhh
Confidence 566 8999999999999999999999999998887666665 556643
No 342
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.15 E-value=0.11 Score=53.86 Aligned_cols=112 Identities=19% Similarity=0.157 Sum_probs=76.0
Q ss_pred CCcEEEEecC-CCCCCCCC-CC-chhHHHHHHC-CCEEEEEccCCCCCCChhhhhccc------ccCCCCcHhHHHHHHH
Q 006375 405 SDPLLLYGYG-SYEICNDP-AF-NSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGK------FLKKKNTFTDFIACAE 474 (648)
Q Consensus 405 ~~P~vl~~hG-g~~~~~~~-~~-~~~~~~l~~~-G~~v~~~~~rG~g~~g~~~~~~~~------~~~~~~~~~D~~~~~~ 474 (648)
..|+.|++-| |+.. ..+ .. ...+..||.+ |..|+....| -||+.+.-... ...-...+.|+...|+
T Consensus 85 ~gPiFLmIGGEgp~~-~~wv~~~~~~~~~~AkkfgA~v~~lEHR---FYG~S~P~~~~st~nlk~LSs~QALaDla~fI~ 160 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPES-DKWVGNENLTWLQWAKKFGATVFQLEHR---FYGQSSPIGDLSTSNLKYLSSLQALADLAEFIK 160 (514)
T ss_pred CCceEEEEcCCCCCC-CCccccCcchHHHHHHHhCCeeEEeeee---ccccCCCCCCCcccchhhhhHHHHHHHHHHHHH
Confidence 3589999966 2222 112 11 2235566665 9999999999 45544321111 1112357788888888
Q ss_pred HHHHcC-CCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcc
Q 006375 475 YLIKNC-YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 520 (648)
Q Consensus 475 ~l~~~~-~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~ 520 (648)
.+-.+. .-++.+....|+|+-|.|++++=..+|+++.++|+.+..+
T Consensus 161 ~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 161 AMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 887664 5566799999999999999999999999988888776544
No 343
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.11 E-value=3.5 Score=39.95 Aligned_cols=131 Identities=9% Similarity=0.056 Sum_probs=74.3
Q ss_pred EEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEecCC--eEEEEEeCCCCCCceEEEEECCCCCC
Q 006375 86 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE--ALVYITMDEILRPDKAWLHKLEADQS 163 (648)
Q Consensus 86 ~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg--~l~y~~~~~~~~~~~l~~~~l~~~~~ 163 (648)
...-+||++=+.+.+..|. -.-...++.....++++|-. .++|.+.+. .-.+.++..+.+
T Consensus 41 af~~~dgs~g~a~~~eaGk-------------~v~~~~lpaR~Hgi~~~p~~~ravafARrPG----tf~~vfD~~~~~- 102 (366)
T COG3490 41 AFDARDGSFGAATLSEAGK-------------IVFATALPARGHGIAFHPALPRAVAFARRPG----TFAMVFDPNGAQ- 102 (366)
T ss_pred eeeccCCceeEEEEccCCc-------------eeeeeecccccCCeecCCCCcceEEEEecCC----ceEEEECCCCCc-
Confidence 3445666665555554441 11122334444458888886 777776542 224456666653
Q ss_pred CcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccc--cEEEEEECCCCCceeEeee----cccceeeeEeecCCEEEEE
Q 006375 164 NDICLYHEKDDIYSLGLQASESKKFLFIASESKIT--RFVFYLDVSKPEELRVLTP----RVVGVDTAASHRGNHFFIT 236 (648)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~--~~l~~~dl~~~~~~~~l~~----~~~~~~~~~s~dg~~l~~~ 236 (648)
+..++....+..|+-.-.+|+||++|+.+-++.+. .-|=++|...+ ++.+-. ...-.+..|.+||+.+++.
T Consensus 103 ~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~--fqrvgE~~t~GiGpHev~lm~DGrtlvva 179 (366)
T COG3490 103 EPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREG--FQRVGEFSTHGIGPHEVTLMADGRTLVVA 179 (366)
T ss_pred CcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccc--cceecccccCCcCcceeEEecCCcEEEEe
Confidence 34444444444455445789999999877665433 45666776543 444321 2223456799999977654
No 344
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.11 E-value=0.2 Score=56.65 Aligned_cols=178 Identities=11% Similarity=0.128 Sum_probs=108.8
Q ss_pred CCCceEEEecccccCC----------CCcEEEeeEEeCCCCC-EEEEEEeCCCCeEEEEEEEECCCCCee-ec-c--ccC
Q 006375 62 APPEHLILDENVKAEG----------RGFYSVGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDIETGTPV-GK-P--LVG 126 (648)
Q Consensus 62 ~~~~~~lld~n~~~~~----------~~~~~~~~~~~SPDG~-~la~~~~~~G~e~~~l~v~dl~~g~~~-~~-~--~~~ 126 (648)
++|..+|.|++.+..+ ..+-.+.++.|+|.+. .||= |+...+|+|||+..-+.- .- . ..+
T Consensus 88 edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLAS-----Ga~~geI~iWDlnn~~tP~~~~~~~~~~ 162 (1049)
T KOG0307|consen 88 EDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLAS-----GADDGEILIWDLNKPETPFTPGSQAPPS 162 (1049)
T ss_pred cCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeec-----cCCCCcEEEeccCCcCCCCCCCCCCCcc
Confidence 3456788999886211 1245677799999987 6663 334568999999863321 10 1 112
Q ss_pred ccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCe-EEEEEeCCCCc-EEEEEEccccccEEEE
Q 006375 127 VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIY-SLGLQASESKK-FLFIASESKITRFVFY 203 (648)
Q Consensus 127 ~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~s~Dg~-~l~~~~~~~~~~~l~~ 203 (648)
-...++|...- .|+-.... .....++||... +..+-+.....+. ...+.|.||+. .|++.++++...-|-+
T Consensus 163 eI~~lsWNrkvqhILAS~s~----sg~~~iWDlr~~--~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~Pviql 236 (1049)
T KOG0307|consen 163 EIKCLSWNRKVSHILASGSP----SGRAVIWDLRKK--KPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQL 236 (1049)
T ss_pred cceEeccchhhhHHhhccCC----CCCceeccccCC--CcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEe
Confidence 23458887665 66544332 223556677654 3344444333322 44689999974 5655556666678888
Q ss_pred EECCCCC-ceeEeeeccccee-eeEeecCCEEEEEeccCCCCCcEEEEEeCCC
Q 006375 204 LDVSKPE-ELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 204 ~dl~~~~-~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 254 (648)
+|+.-.. +.+.++.+..|+. ..|.+.+..+++.+..+ .+++..+.++
T Consensus 237 WDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD----~~ii~wN~~t 285 (1049)
T KOG0307|consen 237 WDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKD----NRIICWNPNT 285 (1049)
T ss_pred ecccccCCchhhhcccccceeeeccCCCCchhhhcccCC----CCeeEecCCC
Confidence 8876554 3455555555543 56999888888887763 4677777765
No 345
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=95.05 E-value=2 Score=42.08 Aligned_cols=159 Identities=12% Similarity=0.080 Sum_probs=89.2
Q ss_pred CCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEEC-CCCCeee---c------cccCccceeEEecCC--eEEEEEeC
Q 006375 78 RGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDI-ETGTPVG---K------PLVGVTASVEWAGNE--ALVYITMD 145 (648)
Q Consensus 78 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl-~~g~~~~---~------~~~~~~~~~~WspDg--~l~y~~~~ 145 (648)
++.....++.|||||.+|.-.- +..|+|+|+ ..|..-+ . ...++.+.++++|-. .++..++
T Consensus 156 de~taAhsL~Fs~DGeqlfaGy------krcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY- 228 (406)
T KOG2919|consen 156 DEYTAAHSLQFSPDGEQLFAGY------KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSY- 228 (406)
T ss_pred HhhhhheeEEecCCCCeEeecc------cceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecc-
Confidence 3456667899999999986432 457999998 4554321 1 123456778899865 4544443
Q ss_pred CCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeEeeeccc----
Q 006375 146 EILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVV---- 220 (648)
Q Consensus 146 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~---- 220 (648)
.+...||..+=. ....+..+. ..-...+.|-+||..++. ..+-...|-.+|+.... .+..|.....
T Consensus 229 --~q~~giy~~~~~----~pl~llggh-~gGvThL~~~edGn~lfs--GaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQ 299 (406)
T KOG2919|consen 229 --GQRVGIYNDDGR----RPLQLLGGH-GGGVTHLQWCEDGNKLFS--GARKDDKILCWDIRYSRDPVYALERHVGDTNQ 299 (406)
T ss_pred --cceeeeEecCCC----Cceeeeccc-CCCeeeEEeccCcCeecc--cccCCCeEEEEeehhccchhhhhhhhccCccc
Confidence 222335543311 122222222 223346789999998874 33334677788886644 1112221111
Q ss_pred ceeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCc
Q 006375 221 GVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 257 (648)
Q Consensus 221 ~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 257 (648)
.+.+..+|+|++|+-- ...+-|-+.|+++.+.
T Consensus 300 RI~FDld~~~~~LasG-----~tdG~V~vwdlk~~gn 331 (406)
T KOG2919|consen 300 RILFDLDPKGEILASG-----DTDGSVRVWDLKDLGN 331 (406)
T ss_pred eEEEecCCCCceeecc-----CCCccEEEEecCCCCC
Confidence 1334577888866422 2335677778877554
No 346
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.94 E-value=0.036 Score=53.81 Aligned_cols=85 Identities=18% Similarity=0.053 Sum_probs=53.4
Q ss_pred cEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCe
Q 006375 407 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 486 (648)
Q Consensus 407 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~ 486 (648)
|.|+++|++.|.. +.|.+....|... ..|+....+|-+... ....+++|+.++.-..+.+. -....
T Consensus 1 ~pLF~fhp~~G~~--~~~~~L~~~l~~~-~~v~~l~a~g~~~~~----------~~~~~l~~~a~~yv~~Ir~~-QP~GP 66 (257)
T COG3319 1 PPLFCFHPAGGSV--LAYAPLAAALGPL-LPVYGLQAPGYGAGE----------QPFASLDDMAAAYVAAIRRV-QPEGP 66 (257)
T ss_pred CCEEEEcCCCCcH--HHHHHHHHHhccC-ceeeccccCcccccc----------cccCCHHHHHHHHHHHHHHh-CCCCC
Confidence 5789999966542 3355555555544 888888888765322 22244556555443333221 11257
Q ss_pred EEEEeeChhHHHHHHHHhh
Q 006375 487 LCIEGRSAGGLLIGAVLNM 505 (648)
Q Consensus 487 i~i~G~S~GG~l~~~~~~~ 505 (648)
..+.|+|+||.++..+|.+
T Consensus 67 y~L~G~S~GG~vA~evA~q 85 (257)
T COG3319 67 YVLLGWSLGGAVAFEVAAQ 85 (257)
T ss_pred EEEEeeccccHHHHHHHHH
Confidence 9999999999999888776
No 347
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.87 E-value=0.13 Score=54.44 Aligned_cols=132 Identities=14% Similarity=0.094 Sum_probs=73.3
Q ss_pred CeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCC-------c--------------hhHHHHHHCCCEEEEEccC
Q 006375 386 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF-------N--------------SSRLSLLDRGFIFAIAQIR 444 (648)
Q Consensus 386 g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~-------~--------------~~~~~l~~~G~~v~~~~~r 444 (648)
+..+..|++...+ .....|+||++-||+|.+...++ . ..-..|.+ -..++.+|.+
T Consensus 49 ~~~lfy~f~es~~---~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~-~anllfiDqP 124 (433)
T PLN03016 49 NVQFFYYFIKSEN---NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTK-MANIIFLDQP 124 (433)
T ss_pred CeEEEEEEEecCC---CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhh-cCcEEEecCC
Confidence 4556666554332 23567999999999886542111 0 00123333 3678888977
Q ss_pred CCCCCChhhhhcccccCC-CCcHhHHHHHHH-HHHHcCCCCCCeEEEEeeChhHHHHHHHH----hhC------CCceeE
Q 006375 445 GGGELGRQWYENGKFLKK-KNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVL----NMR------PDLFKA 512 (648)
Q Consensus 445 G~g~~g~~~~~~~~~~~~-~~~~~D~~~~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~~~~----~~~------p~~~~a 512 (648)
-|.|+... ........ ....+|+...+. |+..........+.|+|.|+||..+-.++ ..+ +=-+++
T Consensus 125 vGtGfSy~--~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkG 202 (433)
T PLN03016 125 VGSGFSYS--KTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQG 202 (433)
T ss_pred CCCCccCC--CCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCccccee
Confidence 66555421 11111111 112245554444 33333333456799999999998443333 222 115789
Q ss_pred EEecCCccccc
Q 006375 513 AVAAVPFVDVL 523 (648)
Q Consensus 513 ~v~~~~~~d~~ 523 (648)
+++..|++|..
T Consensus 203 i~iGNg~t~~~ 213 (433)
T PLN03016 203 YMLGNPVTYMD 213 (433)
T ss_pred eEecCCCcCch
Confidence 99999988764
No 348
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=94.85 E-value=1.4 Score=41.55 Aligned_cols=189 Identities=16% Similarity=0.153 Sum_probs=106.3
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC---ccceeEEecCC-eEEEEEeCCCCCCceEEEEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~ 157 (648)
-+....+|-|.++|. .+|. .--|+|+|+...+..+..+.+ ....+.|.-.. .|+-...+ ..|.++|
T Consensus 102 ivk~~af~~ds~~ll----tgg~-ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd-----~tVRLWD 171 (334)
T KOG0278|consen 102 IVKAVAFSQDSNYLL----TGGQ-EKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADD-----KTVRLWD 171 (334)
T ss_pred eeeeEEecccchhhh----ccch-HHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccC-----CceEEEE
Confidence 345677788877765 2333 446889998876655444433 23458897666 77544332 2366677
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecc--cce-eeeEeecCCEEE
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV--VGV-DTAASHRGNHFF 234 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~--~~~-~~~~s~dg~~l~ 234 (648)
..++.. -..+.... + .-+..+|+||++|.+... +.|-.+|..+-. +|.... -.+ ..+++|+. .+|
T Consensus 172 ~rTgt~-v~sL~~~s-~--VtSlEvs~dG~ilTia~g----ssV~Fwdaksf~---~lKs~k~P~nV~SASL~P~k-~~f 239 (334)
T KOG0278|consen 172 HRTGTE-VQSLEFNS-P--VTSLEVSQDGRILTIAYG----SSVKFWDAKSFG---LLKSYKMPCNVESASLHPKK-EFF 239 (334)
T ss_pred eccCcE-EEEEecCC-C--CcceeeccCCCEEEEecC----ceeEEecccccc---ceeeccCccccccccccCCC-ceE
Confidence 777622 22222221 2 225678999999987543 346667766533 232221 122 23577876 354
Q ss_pred EEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCE-EEEEEecCCeeEEEEEEc
Q 006375 235 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRL 297 (648)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~l~v~~~ 297 (648)
+.-+ ..+.++++|-.++ ......-.+....+..+.+.+++ ++....++|.-+||....
T Consensus 240 VaGg----ed~~~~kfDy~Tg-eEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~ 298 (334)
T KOG0278|consen 240 VAGG----EDFKVYKFDYNTG-EEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTP 298 (334)
T ss_pred EecC----cceEEEEEeccCC-ceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecC
Confidence 4433 3489999998873 33223212222335566677765 455566777766666543
No 349
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=94.77 E-value=0.99 Score=50.62 Aligned_cols=100 Identities=16% Similarity=0.056 Sum_probs=62.7
Q ss_pred EEEeeEEeCCCCCEEEEEEeCC-C---CeEEEEEEEECCCCCeeeccccCccceeEEecCC-eEEEEEeCCCCCCceEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTK-G---DEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWL 155 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~-G---~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~ 155 (648)
..++.+.++|+|+.++|..+.- . .....+|+.|..+ ............+.|+||| .+++... ......++|.
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~spdg~~~~~~~~-~~~~~~~l~l 89 (620)
T COG1506 13 ARVSDPRVSPPGGRLAYILTGLDFLKPLYKSSLWVSDGKT--VRLLTFGGGVSELRWSPDGSVLAFVST-DGGRVAQLYL 89 (620)
T ss_pred hcccCcccCCCCceeEEeeccccccccccccceEEEeccc--ccccccCCcccccccCCCCCEEEEEec-cCCCcceEEE
Confidence 4566789999999999998741 1 1235788877665 2222333335569999999 7777763 3444677888
Q ss_pred EECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEE
Q 006375 156 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFI 191 (648)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~ 191 (648)
...+ + ....... ......|+++|+.+++
T Consensus 90 ~~~~-g---~~~~~~~----~v~~~~~~~~g~~~~~ 117 (620)
T COG1506 90 VDVG-G---LITKTAF----GVSDARWSPDGDRIAF 117 (620)
T ss_pred EecC-C---ceeeeec----ccccceeCCCCCeEEE
Confidence 8776 3 1111111 1123567888887777
No 350
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=94.75 E-value=2.7 Score=42.30 Aligned_cols=114 Identities=14% Similarity=0.130 Sum_probs=74.7
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee-ec-----cccC---ccceeEEecCC-eEEEEEeCCCCCCc
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-GK-----PLVG---VTASVEWAGNE-ALVYITMDEILRPD 151 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~-~~-----~~~~---~~~~~~WspDg-~l~y~~~~~~~~~~ 151 (648)
.+-...|+|=...+.- +|+|..+|.||.+-.+... .. .+.+ ..+.++|.|-- -++.+. +..+
T Consensus 83 ~vLDi~w~PfnD~vIA----SgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsa----g~Dn 154 (472)
T KOG0303|consen 83 PVLDIDWCPFNDCVIA----SGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSA----GSDN 154 (472)
T ss_pred cccccccCccCCceee----cCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhc----cCCc
Confidence 3446678886554432 4788899999987543322 11 1222 24569999987 665543 3345
Q ss_pred eEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 152 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 152 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
.|..++++++ +..+-.. .+....+.+|+.||..++-++. +..|.++|..+++
T Consensus 155 ~v~iWnv~tg--eali~l~--hpd~i~S~sfn~dGs~l~Ttck---DKkvRv~dpr~~~ 206 (472)
T KOG0303|consen 155 TVSIWNVGTG--EALITLD--HPDMVYSMSFNRDGSLLCTTCK---DKKVRVIDPRRGT 206 (472)
T ss_pred eEEEEeccCC--ceeeecC--CCCeEEEEEeccCCceeeeecc---cceeEEEcCCCCc
Confidence 6999999998 3333333 4566778899999998875443 3578899988876
No 351
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=94.69 E-value=5.4 Score=41.33 Aligned_cols=225 Identities=12% Similarity=0.062 Sum_probs=113.3
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc--ccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~--~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
+.+..+-.||+++|. |++...|.|+|.++...+..- -........|+|++ +++.+..|+. .+..+++.
T Consensus 71 v~s~~fR~DG~Llaa-----GD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~----v~k~~d~s 141 (487)
T KOG0310|consen 71 VYSVDFRSDGRLLAA-----GDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDK----VVKYWDLS 141 (487)
T ss_pred eeEEEeecCCeEEEc-----cCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCc----eEEEEEcC
Confidence 456678899999885 344458999996663333211 11113346789988 7776665432 24456666
Q ss_pred CCCCCcEEEEeecC-CCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeEeeecccceeeeEeecCCEEEEEe
Q 006375 160 ADQSNDICLYHEKD-DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFITR 237 (648)
Q Consensus 160 ~~~~~~~~~~~~~~-~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~~~~~s~dg~~l~~~~ 237 (648)
+.. . ..+..+ ..+.-..+|+|-..+|+++.+ .+..|.++|+.... ....+..+.+-...-+-|.|..|+ +.
T Consensus 142 ~a~---v-~~~l~~htDYVR~g~~~~~~~hivvtGs--YDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~ia-sA 214 (487)
T KOG0310|consen 142 TAY---V-QAELSGHTDYVRCGDISPANDHIVVTGS--YDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIA-SA 214 (487)
T ss_pred CcE---E-EEEecCCcceeEeeccccCCCeEEEecC--CCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEE-Ec
Confidence 652 2 322222 234435678998888887543 33456666766543 122232222222222445565443 21
Q ss_pred ccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCC-EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecC
Q 006375 238 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFI 316 (648)
Q Consensus 238 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~ 316 (648)
+++ .+-++|+-++++...... .....+..+....+ ..++...-++ ++.+++.. .-+. -+...+|
T Consensus 215 ---gGn--~vkVWDl~~G~qll~~~~-~H~KtVTcL~l~s~~~rLlS~sLD~--~VKVfd~t--~~Kv-----v~s~~~~ 279 (487)
T KOG0310|consen 215 ---GGN--SVKVWDLTTGGQLLTSMF-NHNKTVTCLRLASDSTRLLSGSLDR--HVKVFDTT--NYKV-----VHSWKYP 279 (487)
T ss_pred ---CCC--eEEEEEecCCceehhhhh-cccceEEEEEeecCCceEeeccccc--ceEEEEcc--ceEE-----EEeeecc
Confidence 122 455567764332221111 12233555555443 3344443333 46666644 2222 1455677
Q ss_pred CCeeeeeCCCCcccccEEEEEEeeC
Q 006375 317 DPVYSIDPSESVFSSRILRFHYSSL 341 (648)
Q Consensus 317 ~~~~~v~~~~~~~~~~~l~~~~ss~ 341 (648)
.|..++ ..+++++.+.+.-++-
T Consensus 280 ~pvLsi---avs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 280 GPVLSI---AVSPDDQTVVIGMSNG 301 (487)
T ss_pred cceeeE---EecCCCceEEEecccc
Confidence 665443 3345666666555443
No 352
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=94.58 E-value=0.91 Score=45.14 Aligned_cols=112 Identities=19% Similarity=0.244 Sum_probs=68.5
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec--cccCccceeEEecCCeEEEEEeCCCCCCceEEEEECCC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
+-.+++|+.+.+|||-.+..- .+|+++|+.+-++... .-.+....+++++||.++-+..+. ..-++.+.+.+
T Consensus 132 l~AlS~n~~n~ylAyp~s~t~---GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeK---GTVIRVf~v~~ 205 (391)
T KOG2110|consen 132 LCALSPNNANCYLAYPGSTTS---GDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEK---GTVIRVFSVPE 205 (391)
T ss_pred eEeeccCCCCceEEecCCCCC---ceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccC---ceEEEEEEcCC
Confidence 556677888889999866542 4899999887665532 123335568999999554454422 23344555555
Q ss_pred CCCCcEEEEeecC---CCeEEEEEeCCCCcEEEEEEccccccEEEEEE
Q 006375 161 DQSNDICLYHEKD---DIYSLGLQASESKKFLFIASESKITRFVFYLD 205 (648)
Q Consensus 161 ~~~~~~~~~~~~~---~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d 205 (648)
+ .++++--. +.-..+++++||+++|..+++.. +-+|+.++
T Consensus 206 G----~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~Te-TVHiFKL~ 248 (391)
T KOG2110|consen 206 G----QKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTE-TVHIFKLE 248 (391)
T ss_pred c----cEeeeeeCCceeeEEEEEEECCCCCeEEEecCCC-eEEEEEec
Confidence 4 23343222 22345789999999988765543 33444444
No 353
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.54 E-value=0.79 Score=43.33 Aligned_cols=114 Identities=17% Similarity=0.139 Sum_probs=61.7
Q ss_pred CCCCcEEEEecCCCCCCCCCCCchh-HHHHHHC-C--CEEEEEccCCCCCCChhhhhcccccC-CCCcHhHHHHHHHHHH
Q 006375 403 DGSDPLLLYGYGSYEICNDPAFNSS-RLSLLDR-G--FIFAIAQIRGGGELGRQWYENGKFLK-KKNTFTDFIACAEYLI 477 (648)
Q Consensus 403 ~~~~P~vl~~hGg~~~~~~~~~~~~-~~~l~~~-G--~~v~~~~~rG~g~~g~~~~~~~~~~~-~~~~~~D~~~~~~~l~ 477 (648)
....|.|+++-|.+|.. +|-.. ...|... + ..|..+---|+-.....-.+.....+ ..-+++|.+.---..+
T Consensus 26 ~~~~~li~~IpGNPG~~---gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFi 102 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLL---GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFI 102 (301)
T ss_pred CCCceEEEEecCCCCch---hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHH
Confidence 35678999999988753 23322 2222221 2 33444444444333322222222111 1124455554333334
Q ss_pred HcCCCCCCeEEEEeeChhHHHHHHHHhhC-CC-ceeEEEecCCc
Q 006375 478 KNCYCTKEKLCIEGRSAGGLLIGAVLNMR-PD-LFKAAVAAVPF 519 (648)
Q Consensus 478 ~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~-~~~a~v~~~~~ 519 (648)
++..-...||.++|||-|+++++.++-.. ++ .++.+++..|-
T Consensus 103 k~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 103 KEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred HHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 44444558999999999999999988743 22 35566766663
No 354
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=94.45 E-value=1.4 Score=42.07 Aligned_cols=135 Identities=14% Similarity=0.075 Sum_probs=79.7
Q ss_pred ceEEEeccccc---CCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCC-------CCeee-c-cccCccceeE
Q 006375 65 EHLILDENVKA---EGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-------GTPVG-K-PLVGVTASVE 132 (648)
Q Consensus 65 ~~~lld~n~~~---~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~-------g~~~~-~-~~~~~~~~~~ 132 (648)
.-.|.|..+-. .-.--..+....+|++|++++++.+..=+-...|.++|+.. .++.. . +.+.....+.
T Consensus 75 t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~ 154 (327)
T KOG0643|consen 75 TAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSAL 154 (327)
T ss_pred eeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeee
Confidence 34667754422 11123567888999999999999876544467888888873 33221 1 1222344588
Q ss_pred EecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEee-cCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 133 WAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 133 WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
|+|-+ .|++. .+...|-.+++.++. +++-.. ....-..+.++|+|..+++ +++...+.. ++|..+-+
T Consensus 155 Wg~l~~~ii~G-----he~G~is~~da~~g~---~~v~s~~~h~~~Ind~q~s~d~T~Fi-T~s~Dttak--l~D~~tl~ 223 (327)
T KOG0643|consen 155 WGPLGETIIAG-----HEDGSISIYDARTGK---ELVDSDEEHSSKINDLQFSRDRTYFI-TGSKDTTAK--LVDVRTLE 223 (327)
T ss_pred ecccCCEEEEe-----cCCCcEEEEEcccCc---eeeechhhhccccccccccCCcceEE-ecccCccce--eeecccee
Confidence 99999 77663 334458888888762 222211 1122334678999998765 333333344 34555433
No 355
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=94.28 E-value=0.53 Score=47.14 Aligned_cols=102 Identities=18% Similarity=0.146 Sum_probs=59.7
Q ss_pred EEEEEEECCCCCeeeccccCccceeEEecCC-eEEEEE-----eCCCCCCceEEEEECCCCCCCcEEEEeecCCCeE---
Q 006375 107 YTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYIT-----MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYS--- 177 (648)
Q Consensus 107 ~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg-~l~y~~-----~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~--- 177 (648)
.+++|+|.++++.+-....+...++.-|||| .+|... ...+.|..-|-.+|..+-....+.+...+ +++.
T Consensus 17 ~rv~viD~d~~k~lGmi~~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k-~R~~~~~ 95 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDTGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPK-PRAQVVP 95 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS--B--BS-
T ss_pred ceEEEEECCCCcEEEEeecccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCc-chheecc
Confidence 4799999999887643334455678899999 554322 12222333355677766532222222211 1221
Q ss_pred --EEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 178 --LGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 178 --~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
.....|.|||++++. |-...+.+-++|++.++
T Consensus 96 ~~~~~~ls~dgk~~~V~-N~TPa~SVtVVDl~~~k 129 (342)
T PF06433_consen 96 YKNMFALSADGKFLYVQ-NFTPATSVTVVDLAAKK 129 (342)
T ss_dssp -GGGEEE-TTSSEEEEE-EESSSEEEEEEETTTTE
T ss_pred cccceEEccCCcEEEEE-ccCCCCeEEEEECCCCc
Confidence 135789999999885 33345778999999876
No 356
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=94.28 E-value=0.12 Score=42.65 Aligned_cols=42 Identities=33% Similarity=0.517 Sum_probs=34.0
Q ss_pred CeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccCC
Q 006375 568 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 616 (648)
Q Consensus 568 P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~ 616 (648)
+|+||+.++.|+..|+..++++.++|.. .+++... +.||+..
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~---g~gHg~~ 76 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVD---GAGHGVY 76 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEe---ccCccee
Confidence 4599999999999999999999988874 3456665 6689654
No 357
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=94.14 E-value=5.1 Score=41.03 Aligned_cols=247 Identities=11% Similarity=0.079 Sum_probs=125.1
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec---------cccCc---cceeEEecCC-eEEEEEeCCCCCCc
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---------PLVGV---TASVEWAGNE-ALVYITMDEILRPD 151 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~---------~~~~~---~~~~~WspDg-~l~y~~~~~~~~~~ 151 (648)
..+.-|....|.-+.... .+++|+|......++. .+.+. ..+++|++.. ..+.+..+ ..
T Consensus 129 RaRymPQnp~iVAt~t~~----~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~----d~ 200 (422)
T KOG0264|consen 129 RARYMPQNPNIVATKTSS----GDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSD----DH 200 (422)
T ss_pred hhhhCCCCCcEEEecCCC----CCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccC----CC
Confidence 334455555554443333 4788998765332211 12211 2358999887 44444332 23
Q ss_pred eEEEEECCCCCC-----CcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeEee-eccccee-
Q 006375 152 KAWLHKLEADQS-----NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLT-PRVVGVD- 223 (648)
Q Consensus 152 ~l~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~-~~~~~~~- 223 (648)
.+-.+++..... ..+.+|.... ...-+++|.+-...++.... .++.|.++|+.+++ +++... .....+.
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~-~~VeDV~~h~~h~~lF~sv~--dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~ 277 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHE-DVVEDVAWHPLHEDLFGSVG--DDGKLMIWDTRSNTSKPSHSVKAHSAEVNC 277 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCC-cceehhhccccchhhheeec--CCCeEEEEEcCCCCCCCcccccccCCceeE
Confidence 355556554432 2334454432 33346788887777765443 45678888888532 122222 2222233
Q ss_pred eeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCC--EEEEEEecCCeeEEEEEEcCCCC
Q 006375 224 TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVG 301 (648)
Q Consensus 224 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~l~v~~~~~~g 301 (648)
..|.|.++.|+.+... +..|...|+......--.+... ...+-.+.|+++ .++..... ..++.+|++..-|
T Consensus 278 ~~fnp~~~~ilAT~S~----D~tV~LwDlRnL~~~lh~~e~H-~dev~~V~WSPh~etvLASSg~--D~rl~vWDls~ig 350 (422)
T KOG0264|consen 278 VAFNPFNEFILATGSA----DKTVALWDLRNLNKPLHTFEGH-EDEVFQVEWSPHNETVLASSGT--DRRLNVWDLSRIG 350 (422)
T ss_pred EEeCCCCCceEEeccC----CCcEEEeechhcccCceeccCC-CcceEEEEeCCCCCceeEeccc--CCcEEEEeccccc
Confidence 4588888877655443 3578888987643322133322 223556666664 55544443 4578888887544
Q ss_pred Cccc--ccCC-CceeecCCCe--eeeeCCCCcccccEEEEEEeeCCCCCEEEEEEC
Q 006375 302 EPLK--SLQG-GKSVEFIDPV--YSIDPSESVFSSRILRFHYSSLRTPPSVYDYDM 352 (648)
Q Consensus 302 ~~~~--~l~~-~~~i~~~~~~--~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~ 352 (648)
+... .-.+ +.++.|-..+ ..|..+++++...-++++.+.. ..+..+.+
T Consensus 351 ~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeD---N~LqIW~~ 403 (422)
T KOG0264|consen 351 EEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAED---NILQIWQM 403 (422)
T ss_pred cccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCC---ceEEEeec
Confidence 4211 0000 0122222111 1244566777766555555444 44444444
No 358
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=94.12 E-value=4.4 Score=39.43 Aligned_cols=75 Identities=7% Similarity=-0.011 Sum_probs=49.4
Q ss_pred ccceeEEecCCeEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEEC
Q 006375 127 VTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV 206 (648)
Q Consensus 127 ~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl 206 (648)
......|+|||..+.+ .+...+|+++++-.... -.-+.... ..-.+++.|++|++.|+- ..++..++.+|.
T Consensus 49 eI~~~~F~P~gs~~aS----gG~Dr~I~LWnv~gdce-N~~~lkgH-sgAVM~l~~~~d~s~i~S---~gtDk~v~~wD~ 119 (338)
T KOG0265|consen 49 EIYTIKFHPDGSCFAS----GGSDRAIVLWNVYGDCE-NFWVLKGH-SGAVMELHGMRDGSHILS---CGTDKTVRGWDA 119 (338)
T ss_pred eEEEEEECCCCCeEee----cCCcceEEEEecccccc-ceeeeccc-cceeEeeeeccCCCEEEE---ecCCceEEEEec
Confidence 3456899999944443 23456788888765522 22222222 334568899999999873 334578999999
Q ss_pred CCCC
Q 006375 207 SKPE 210 (648)
Q Consensus 207 ~~~~ 210 (648)
++++
T Consensus 120 ~tG~ 123 (338)
T KOG0265|consen 120 ETGK 123 (338)
T ss_pred ccce
Confidence 9987
No 359
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=93.95 E-value=1.8 Score=43.01 Aligned_cols=117 Identities=15% Similarity=0.219 Sum_probs=68.4
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee--ccccCccceeEEecCC---eEEEEEeCC--------CC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG--KPLVGVTASVEWAGNE---ALVYITMDE--------IL 148 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~--~~~~~~~~~~~WspDg---~l~y~~~~~--------~~ 148 (648)
-+.-++++-||+.+|--.. ..+|.+|-+++++-.. ...+...--++|.|+. .|...+... ..
T Consensus 237 wvr~v~v~~DGti~As~s~-----dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~S 311 (406)
T KOG0295|consen 237 WVRMVRVNQDGTIIASCSN-----DQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGS 311 (406)
T ss_pred hEEEEEecCCeeEEEecCC-----CceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeec
Confidence 3456788999998874332 3578888888873221 1122222336666654 222211110 12
Q ss_pred CCceEEEEECCCCCCCcEEEEe-ecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 149 RPDKAWLHKLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 149 ~~~~l~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
+..-+..+++.++ ..+++ .....|.-+++++|.||||+-.+. +..|.++|+.+++
T Consensus 312 rDktIk~wdv~tg----~cL~tL~ghdnwVr~~af~p~Gkyi~ScaD---Dktlrvwdl~~~~ 367 (406)
T KOG0295|consen 312 RDKTIKIWDVSTG----MCLFTLVGHDNWVRGVAFSPGGKYILSCAD---DKTLRVWDLKNLQ 367 (406)
T ss_pred ccceEEEEeccCC----eEEEEEecccceeeeeEEcCCCeEEEEEec---CCcEEEEEeccce
Confidence 2344667788776 23333 233567778999999999975443 3457778887765
No 360
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=93.94 E-value=3.4 Score=44.97 Aligned_cols=208 Identities=11% Similarity=0.073 Sum_probs=107.9
Q ss_pred CceEEEecccccC-----CCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee-ccc-cCccceeEEecC
Q 006375 64 PEHLILDENVKAE-----GRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPL-VGVTASVEWAGN 136 (648)
Q Consensus 64 ~~~~lld~n~~~~-----~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~-~~~-~~~~~~~~WspD 136 (648)
+...+.|.+.-.. ...+..+.++.+++|+.-+.+... .-.+.|||+..-+.+. .+. .... ++...++
T Consensus 171 ~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~R-----Dkvi~vwd~~~~~~l~~lp~ye~~E-~vv~l~~ 244 (775)
T KOG0319|consen 171 GTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGR-----DKVIIVWDLVQYKKLKTLPLYESLE-SVVRLRE 244 (775)
T ss_pred ceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEecc-----CcEEEEeehhhhhhhheechhhhee-eEEEech
Confidence 3445667663221 023567889999999998887653 2378899996544332 122 2223 2555555
Q ss_pred -----CeEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeec-CCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 137 -----EALVYITMDEILRPDKAWLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 137 -----g~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
|.++++... ...+..++..++. .......+ .+.+........+++.+++++ ..+|+++|.++.+
T Consensus 245 ~~~~~~~~~~TaG~----~g~~~~~d~es~~--~~~~~~~~~~~e~~~~~~~~~~~~~l~vta----eQnl~l~d~~~l~ 314 (775)
T KOG0319|consen 245 ELGGKGEYIITAGG----SGVVQYWDSESGK--CVYKQRQSDSEEIDHLLAIESMSQLLLVTA----EQNLFLYDEDELT 314 (775)
T ss_pred hcCCcceEEEEecC----CceEEEEecccch--hhhhhccCCchhhhcceeccccCceEEEEc----cceEEEEEccccE
Confidence 235555432 2224445544431 11000001 111211223345566666653 3678889887765
Q ss_pred ceeEeeecccce-e-eeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCC-EEEEEEecC
Q 006375 211 ELRVLTPRVVGV-D-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREG 287 (648)
Q Consensus 211 ~~~~l~~~~~~~-~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~ 287 (648)
..+.+....+.+ + .++.|+.+.+++.+|. +..++| ++.+.. .+ +++...+. +.+++...+ .++....++
T Consensus 315 i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs---~~lr~y--~~~~~~-c~-ii~GH~e~-vlSL~~~~~g~llat~sKD 386 (775)
T KOG0319|consen 315 IVKQIVGYNDEILDMKFLGPEESHLAVATNS---PELRLY--TLPTSY-CQ-IIPGHTEA-VLSLDVWSSGDLLATGSKD 386 (775)
T ss_pred EehhhcCCchhheeeeecCCccceEEEEeCC---CceEEE--ecCCCc-eE-EEeCchhh-eeeeeecccCcEEEEecCC
Confidence 112222221111 1 2488888999999986 456776 665532 23 55544443 556664344 366666666
Q ss_pred CeeEEEEE
Q 006375 288 GLQKITTY 295 (648)
Q Consensus 288 ~~~~l~v~ 295 (648)
..-++|.+
T Consensus 387 ~svilWr~ 394 (775)
T KOG0319|consen 387 KSVILWRL 394 (775)
T ss_pred ceEEEEEe
Confidence 55455544
No 361
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=93.77 E-value=3.5 Score=45.38 Aligned_cols=191 Identities=11% Similarity=0.019 Sum_probs=104.3
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc-ccCccceeEEecCC-eEEEEEeCCCCCCceEEEEEC
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l 158 (648)
-.+=.+.||.++-+|--++| -++++|++...+-+-.- -.+....++|.|-+ ..|.++. -..++.++.|
T Consensus 370 ~DILDlSWSKn~fLLSSSMD------KTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGS----LD~KvRiWsI 439 (712)
T KOG0283|consen 370 ADILDLSWSKNNFLLSSSMD------KTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGS----LDGKVRLWSI 439 (712)
T ss_pred hhheecccccCCeeEecccc------ccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecc----cccceEEeec
Confidence 45668899999977766555 37899999876655321 23445679999976 6666543 2345667776
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC---cee-Eee------e-cccceeeeEe
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---ELR-VLT------P-RVVGVDTAAS 227 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~---~~~-~l~------~-~~~~~~~~~s 227 (648)
-.. .+++...-..+...+.++|||+++++.+-.+ ..+.++..+.+ ... .+. . +.-|.+ +.
T Consensus 440 ~d~----~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G---~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q--~~ 510 (712)
T KOG0283|consen 440 SDK----KVVDWNDLRDLITAVCYSPDGKGAVIGTFNG---YCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQ--FF 510 (712)
T ss_pred CcC----eeEeehhhhhhheeEEeccCCceEEEEEecc---EEEEEEccCCeEEEeeeEeeccCccccCceeeeeE--ec
Confidence 543 3333322234555788999999999876432 33444444332 000 010 0 111222 22
Q ss_pred e-cCCEEEEEeccCCCCCcEEEEEeCCCCCcceeE--ecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcC
Q 006375 228 H-RGNHFFITRRSDELFNSELLACPVDNTSETTVL--IPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 228 ~-dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~ 298 (648)
| +-+.+++++++ .+|-++|..+......+ +.......-..+..++++|+... + ...+++|+.+
T Consensus 511 p~~~~~vLVTSnD-----SrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~s-e--Ds~VYiW~~~ 576 (712)
T KOG0283|consen 511 PGDPDEVLVTSND-----SRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSAS-E--DSWVYIWKND 576 (712)
T ss_pred CCCCCeEEEecCC-----CceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEee-c--CceEEEEeCC
Confidence 2 22357777775 36777777431111100 10111112234555667776555 3 2578888875
No 362
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=93.70 E-value=1.8 Score=43.74 Aligned_cols=106 Identities=14% Similarity=0.121 Sum_probs=62.2
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc--cCccceeEEecCC-eEEEEEeCCCCCC------ceE
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE-ALVYITMDEILRP------DKA 153 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~WspDg-~l~y~~~~~~~~~------~~l 153 (648)
+..+.||||+.++...+- ...++++|+..|....... ......++|.|-+ .|.-.+.+...+. ..+
T Consensus 126 iydL~Ws~d~~~l~s~s~-----dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~ 200 (434)
T KOG1009|consen 126 IYDLAWSPDSNFLVSGSV-----DNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVI 200 (434)
T ss_pred hhhhhccCCCceeeeeec-----cceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeee
Confidence 446789999999987653 3578999999998775322 2234569999988 6655554432111 112
Q ss_pred EEEE-----CCCC---CCCcEEEEee-cCCCeEEEEEeCCCCcEEEEEE
Q 006375 154 WLHK-----LEAD---QSNDICLYHE-KDDIYSLGLQASESKKFLFIAS 193 (648)
Q Consensus 154 ~~~~-----l~~~---~~~~~~~~~~-~~~~~~~~~~~s~Dg~~l~~~~ 193 (648)
+++. .+.. ...-..+|.. .-..|+...+|||||..++.-+
T Consensus 201 ~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPa 249 (434)
T KOG1009|consen 201 KRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPA 249 (434)
T ss_pred eeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEccc
Confidence 2221 0100 0111223322 2245677789999998877543
No 363
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=93.55 E-value=1.5 Score=44.08 Aligned_cols=144 Identities=17% Similarity=0.139 Sum_probs=77.6
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCCeEEEEEeCCCCCCceEEEEECC
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
-.++.+.|.|--.-+..+. |. .++|.+||+.||+.+.. .-++...++.|+-||.++.++.. ..+|..++..
T Consensus 132 rrVg~V~wHPtA~NVLlsa---g~-Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~Ttck----DKkvRv~dpr 203 (472)
T KOG0303|consen 132 RRVGLVQWHPTAPNVLLSA---GS-DNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCK----DKKVRVIDPR 203 (472)
T ss_pred eeEEEEeecccchhhHhhc---cC-CceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecc----cceeEEEcCC
Confidence 3455666666544444332 22 46899999999997642 34555667999999955555542 2457777776
Q ss_pred CCCCCcEEEEeec--CCCeEEEEEeCCCCcEEEEEE-ccccccEEEEEECCCCCce---eEeeecccce-eeeEeecCCE
Q 006375 160 ADQSNDICLYHEK--DDIYSLGLQASESKKFLFIAS-ESKITRFVFYLDVSKPEEL---RVLTPRVVGV-DTAASHRGNH 232 (648)
Q Consensus 160 ~~~~~~~~~~~~~--~~~~~~~~~~s~Dg~~l~~~~-~~~~~~~l~~~dl~~~~~~---~~l~~~~~~~-~~~~s~dg~~ 232 (648)
++ +++.+.. ...-....-|-.+|+ |+-+. +......+-++|.+.-+++ +.|-.. .|+ ..++++|.+.
T Consensus 204 ~~----~~v~e~~~heG~k~~Raifl~~g~-i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtS-nGvl~PFyD~dt~i 277 (472)
T KOG0303|consen 204 RG----TVVSEGVAHEGAKPARAIFLASGK-IFTTGFSRMSERQIALWDPNNLEEPIALQELDTS-NGVLLPFYDPDTSI 277 (472)
T ss_pred CC----cEeeecccccCCCcceeEEeccCc-eeeeccccccccceeccCcccccCcceeEEeccC-CceEEeeecCCCCE
Confidence 65 2232221 011112345667777 33222 2233456666665554312 222111 233 3457777776
Q ss_pred EEEEec
Q 006375 233 FFITRR 238 (648)
Q Consensus 233 l~~~~~ 238 (648)
||+..-
T Consensus 278 vYl~GK 283 (472)
T KOG0303|consen 278 VYLCGK 283 (472)
T ss_pred EEEEec
Confidence 665543
No 364
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=93.54 E-value=0.074 Score=50.78 Aligned_cols=20 Identities=35% Similarity=0.559 Sum_probs=16.9
Q ss_pred CeEEEEeeChhHHHHHHHHh
Q 006375 485 EKLCIEGRSAGGLLIGAVLN 504 (648)
Q Consensus 485 ~~i~i~G~S~GG~l~~~~~~ 504 (648)
.+|.++|||+||.++-.++.
T Consensus 78 ~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALG 97 (217)
T ss_pred ccceEEEecccHHHHHHHHH
Confidence 58999999999998866555
No 365
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=93.27 E-value=0.36 Score=59.64 Aligned_cols=99 Identities=12% Similarity=0.021 Sum_probs=62.5
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCC
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 485 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 485 (648)
.|.++++||+.+... .|......| ..++.|+.++.+|.+.. .....+++++.+.+...+..-. ...
T Consensus 1068 ~~~l~~lh~~~g~~~--~~~~l~~~l-~~~~~v~~~~~~g~~~~----------~~~~~~l~~la~~~~~~i~~~~-~~~ 1133 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW--QFSVLSRYL-DPQWSIYGIQSPRPDGP----------MQTATSLDEVCEAHLATLLEQQ-PHG 1133 (1296)
T ss_pred CCCeEEecCCCCchH--HHHHHHHhc-CCCCcEEEEECCCCCCC----------CCCCCCHHHHHHHHHHHHHhhC-CCC
Confidence 366889999766432 344333333 45799999999876532 1122455665554443333211 124
Q ss_pred eEEEEeeChhHHHHHHHHhh---CCCceeEEEecCC
Q 006375 486 KLCIEGRSAGGLLIGAVLNM---RPDLFKAAVAAVP 518 (648)
Q Consensus 486 ~i~i~G~S~GG~l~~~~~~~---~p~~~~a~v~~~~ 518 (648)
+..++|+|+||.++..++.+ +++.+..+++..+
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 79999999999999888875 5677777776554
No 366
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=93.27 E-value=0.49 Score=47.63 Aligned_cols=98 Identities=13% Similarity=0.033 Sum_probs=66.0
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCc-----cceeEEecCC-eEEEEEeCCCCCCceEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV-----TASVEWAGNE-ALVYITMDEILRPDKAW 154 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~-----~~~~~WspDg-~l~y~~~~~~~~~~~l~ 154 (648)
.+.++.+|+||..|.-.+. ..++-++|+.+.++... ..++. ...+.||||+ +++-.+. ...||
T Consensus 343 ~vtSl~ls~~g~~lLsssR-----Ddtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~-----dgsv~ 412 (459)
T KOG0288|consen 343 RVTSLDLSMDGLELLSSSR-----DDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSA-----DGSVY 412 (459)
T ss_pred ceeeEeeccCCeEEeeecC-----CCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccC-----CCcEE
Confidence 7788999999998876532 23789999999887642 22221 4568899999 6655433 34589
Q ss_pred EEECCCCCCCcEEEEeecC-CCeEEEEEeCCCCcEEEE
Q 006375 155 LHKLEADQSNDICLYHEKD-DIYSLGLQASESKKFLFI 191 (648)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~-~~~~~~~~~s~Dg~~l~~ 191 (648)
++++.++.- +.+..... ..-...+.|+|.|++++-
T Consensus 413 iW~v~tgKl--E~~l~~s~s~~aI~s~~W~~sG~~Lls 448 (459)
T KOG0288|consen 413 IWSVFTGKL--EKVLSLSTSNAAITSLSWNPSGSGLLS 448 (459)
T ss_pred EEEccCceE--EEEeccCCCCcceEEEEEcCCCchhhc
Confidence 999888733 23333222 213457899999999874
No 367
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=93.14 E-value=0.26 Score=51.68 Aligned_cols=88 Identities=18% Similarity=0.195 Sum_probs=54.2
Q ss_pred CCchhHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHH
Q 006375 423 AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 502 (648)
Q Consensus 423 ~~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~ 502 (648)
.|...+..|.+.||..- .+++ +.+-+|+.... .....+..+...++.+.+.. ..+|.|+||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~-~~l~---~~pYDWR~~~~--~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRG-KDLF---AAPYDWRLSPA--ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccC-CEEE---EEeechhhchh--hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHH
Confidence 46677788888787631 0111 11123443222 11233456666777665543 5899999999999999998
Q ss_pred HhhCCC------ceeEEEecCCc
Q 006375 503 LNMRPD------LFKAAVAAVPF 519 (648)
Q Consensus 503 ~~~~p~------~~~a~v~~~~~ 519 (648)
+...+. .+++.|..++.
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCC
Confidence 887643 36677766653
No 368
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=93.07 E-value=1.6 Score=42.13 Aligned_cols=142 Identities=11% Similarity=0.184 Sum_probs=83.1
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee-ec-----ccc--CccceeEEec--CC-eEEEEEeCCCCCC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-GK-----PLV--GVTASVEWAG--NE-ALVYITMDEILRP 150 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~-~~-----~~~--~~~~~~~Wsp--Dg-~l~y~~~~~~~~~ 150 (648)
.+..+.|-|++++||-..+ .+|.+|+++.+..+ .. ... ..+.+-.||| || .++-+..
T Consensus 125 ~i~cvew~Pns~klasm~d------n~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d------ 192 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASMDD------NNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSD------ 192 (370)
T ss_pred ceeeEEEcCCCCeeEEecc------CceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCC------
Confidence 5678899999999997763 47889999877652 11 111 1245688998 67 6654432
Q ss_pred ceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeEeeeccccee-eeEee
Q 006375 151 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAASH 228 (648)
Q Consensus 151 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~~-~~~s~ 228 (648)
..++.+++.+.. +.. -.+........+..+.|..++++++..+. .-|.++|+...+ +.+.+.+..-++. ..+.|
T Consensus 193 ~tl~~~D~RT~~-~~~-sI~dAHgq~vrdlDfNpnkq~~lvt~gDd--gyvriWD~R~tk~pv~el~~HsHWvW~VRfn~ 268 (370)
T KOG1007|consen 193 STLQFWDLRTMK-KNN-SIEDAHGQRVRDLDFNPNKQHILVTCGDD--GYVRIWDTRKTKFPVQELPGHSHWVWAVRFNP 268 (370)
T ss_pred CcEEEEEccchh-hhc-chhhhhcceeeeccCCCCceEEEEEcCCC--ccEEEEeccCCCccccccCCCceEEEEEEecC
Confidence 237788887652 211 22222233445677889999998766544 456667776554 2333333222221 12445
Q ss_pred cCCEEEEEecc
Q 006375 229 RGNHFFITRRS 239 (648)
Q Consensus 229 dg~~l~~~~~~ 239 (648)
--++|++....
T Consensus 269 ~hdqLiLs~~S 279 (370)
T KOG1007|consen 269 EHDQLILSGGS 279 (370)
T ss_pred ccceEEEecCC
Confidence 55566555443
No 369
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=93.06 E-value=1.8 Score=41.61 Aligned_cols=90 Identities=17% Similarity=0.159 Sum_probs=52.4
Q ss_pred CcEEEEecCCCCCCCCCCCchhHHHHHHC-CCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCC
Q 006375 406 DPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 484 (648)
Q Consensus 406 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 484 (648)
.| +|+.||-...+....+....+.+.+. |..|.+.+.--+ -...|.. +..+.+.-+.+.+. +..--+
T Consensus 24 ~P-~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g--~~~s~l~--------pl~~Qv~~~ce~v~-~m~~ls 91 (296)
T KOG2541|consen 24 VP-VIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDG--IKDSSLM--------PLWEQVDVACEKVK-QMPELS 91 (296)
T ss_pred CC-EEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCC--cchhhhc--------cHHHHHHHHHHHHh-cchhcc
Confidence 44 56679965555554455444555554 888888875322 1122221 22234444555555 333346
Q ss_pred CeEEEEeeChhHHHHHHHHhhCC
Q 006375 485 EKLCIEGRSAGGLLIGAVLNMRP 507 (648)
Q Consensus 485 ~~i~i~G~S~GG~l~~~~~~~~p 507 (648)
+-..++|.|.||.++=+++..-+
T Consensus 92 qGynivg~SQGglv~Raliq~cd 114 (296)
T KOG2541|consen 92 QGYNIVGYSQGGLVARALIQFCD 114 (296)
T ss_pred CceEEEEEccccHHHHHHHHhCC
Confidence 78999999999977766665543
No 370
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=93.05 E-value=0.73 Score=48.63 Aligned_cols=140 Identities=16% Similarity=0.062 Sum_probs=80.8
Q ss_pred EEeCCCCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhH----------------HHHHHCCCEEEEEcc
Q 006375 380 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSR----------------LSLLDRGFIFAIAQI 443 (648)
Q Consensus 380 ~~~s~~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~----------------~~l~~~G~~v~~~~~ 443 (648)
.+.-..+..+..|++--.. .....|+||++-||||=+.-.+...+. -.|. +=..++..|.
T Consensus 50 ~v~~~~~~~LFYwf~eS~~---~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWn-k~aNiLfLd~ 125 (454)
T KOG1282|consen 50 TVNESEGRQLFYWFFESEN---NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWN-KEANILFLDQ 125 (454)
T ss_pred ECCCCCCceEEEEEEEccC---CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCcccc-ccccEEEEec
Confidence 3333457778888665432 234579999999998754322221111 0122 1245777777
Q ss_pred CCCCCCChhhhhcccccCCCCcHhHHH-HHHHHHHHcCCCCCCeEEEEeeChhHH----HHHHHHhhCC------CceeE
Q 006375 444 RGGGELGRQWYENGKFLKKKNTFTDFI-ACAEYLIKNCYCTKEKLCIEGRSAGGL----LIGAVLNMRP------DLFKA 512 (648)
Q Consensus 444 rG~g~~g~~~~~~~~~~~~~~~~~D~~-~~~~~l~~~~~~d~~~i~i~G~S~GG~----l~~~~~~~~p------~~~~a 512 (648)
+-|.|+.-.-........-..+.+|.. ...+|+.+.+.-....+.|.|.|++|. ||..+...+. --+++
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG 205 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKG 205 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceE
Confidence 765555332111111111122334444 556677776655567999999999997 4444444331 14789
Q ss_pred EEecCCccccc
Q 006375 513 AVAAVPFVDVL 523 (648)
Q Consensus 513 ~v~~~~~~d~~ 523 (648)
+++..|++|..
T Consensus 206 ~~IGNg~td~~ 216 (454)
T KOG1282|consen 206 YAIGNGLTDPE 216 (454)
T ss_pred EEecCcccCcc
Confidence 99999998854
No 371
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=93.01 E-value=2.1 Score=43.17 Aligned_cols=103 Identities=21% Similarity=0.269 Sum_probs=62.5
Q ss_pred CcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECC--------C-----CC-eee-ccc----cCccceeEEecCC-e
Q 006375 79 GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE--------T-----GT-PVG-KPL----VGVTASVEWAGNE-A 138 (648)
Q Consensus 79 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~--------~-----g~-~~~-~~~----~~~~~~~~WspDg-~ 138 (648)
...++..++|||+|..||=..| ..++.+|... + .+ .+. ... .++ ...+|+||+ .
T Consensus 64 H~~aVN~vRf~p~gelLASg~D-----~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~di-ydL~Ws~d~~~ 137 (434)
T KOG1009|consen 64 HTRAVNVVRFSPDGELLASGGD-----GGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDI-YDLAWSPDSNF 137 (434)
T ss_pred CcceeEEEEEcCCcCeeeecCC-----CceEEEEEecCcCCccccchhhhCccceEEEEEecccccch-hhhhccCCCce
Confidence 4578889999999999985443 2244444433 3 11 111 111 222 349999999 6
Q ss_pred EEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEcc
Q 006375 139 LVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES 195 (648)
Q Consensus 139 l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~ 195 (648)
+...+.+. .++.+++..++ -..+..+ +..+..+++|.|-++++.-.+.+
T Consensus 138 l~s~s~dn-----s~~l~Dv~~G~--l~~~~~d-h~~yvqgvawDpl~qyv~s~s~d 186 (434)
T KOG1009|consen 138 LVSGSVDN-----SVRLWDVHAGQ--LLAILDD-HEHYVQGVAWDPLNQYVASKSSD 186 (434)
T ss_pred eeeeeccc-----eEEEEEeccce--eEeeccc-cccccceeecchhhhhhhhhccC
Confidence 66655433 37888888873 2223322 24566678999999998765443
No 372
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=93.01 E-value=8.8 Score=36.79 Aligned_cols=186 Identities=12% Similarity=0.093 Sum_probs=92.0
Q ss_pred eCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCCeEEEEEeCCCCCCceEEEEECCCCCCCcE
Q 006375 88 VSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDI 166 (648)
Q Consensus 88 ~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~~~~~ 166 (648)
..+++++|... +.. ..|+.+|.++|+.+-. ..++......-..++.+++... ...|+.+++.++.....
T Consensus 32 ~~~~~~~v~~~-~~~----~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~v~v~~~-----~~~l~~~d~~tG~~~W~ 101 (238)
T PF13360_consen 32 AVPDGGRVYVA-SGD----GNLYALDAKTGKVLWRFDLPGPISGAPVVDGGRVYVGTS-----DGSLYALDAKTGKVLWS 101 (238)
T ss_dssp EEEETTEEEEE-ETT----SEEEEEETTTSEEEEEEECSSCGGSGEEEETTEEEEEET-----TSEEEEEETTTSCEEEE
T ss_pred EEEeCCEEEEE-cCC----CEEEEEECCCCCEEEEeeccccccceeeecccccccccc-----eeeeEecccCCcceeee
Confidence 34456655444 333 3899999999987632 2333222122223447765542 12799999888732111
Q ss_pred EEEeec--CCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCc-eeEeeecccc-e--------eeeEeecCCEEE
Q 006375 167 CLYHEK--DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEE-LRVLTPRVVG-V--------DTAASHRGNHFF 234 (648)
Q Consensus 167 ~~~~~~--~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~-~~~l~~~~~~-~--------~~~~s~dg~~l~ 234 (648)
..... ............++..+++... ...|+.+|+++++. +..-...... . .....-.++.+|
T Consensus 102 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 177 (238)
T PF13360_consen 102 -IYLTSSPPAGVRSSSSPAVDGDRLYVGTS---SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVY 177 (238)
T ss_dssp -EEE-SSCTCSTB--SEEEEETTEEEEEET---CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEE
T ss_pred -eccccccccccccccCceEecCEEEEEec---cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEE
Confidence 11111 1111112222233666665443 56789999988871 1111111111 0 112222334666
Q ss_pred EEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccce-EEEeCCEEEEEEecCCeeEEEEEEcCC
Q 006375 235 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQD-IQLFIDHLAVYEREGGLQKITTYRLPA 299 (648)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~l~v~~~~~ 299 (648)
+.+.. + +++.+|+.+ +...|..+ ... ... +...++.+++.. ++ ..+..+++.+
T Consensus 178 ~~~~~-g----~~~~~d~~t-g~~~w~~~--~~~-~~~~~~~~~~~l~~~~-~~--~~l~~~d~~t 231 (238)
T PF13360_consen 178 VSSGD-G----RVVAVDLAT-GEKLWSKP--ISG-IYSLPSVDGGTLYVTS-SD--GRLYALDLKT 231 (238)
T ss_dssp EECCT-S----SEEEEETTT-TEEEEEEC--SS--ECECEECCCTEEEEEE-TT--TEEEEEETTT
T ss_pred EEcCC-C----eEEEEECCC-CCEEEEec--CCC-ccCCceeeCCEEEEEe-CC--CEEEEEECCC
Confidence 65544 2 366678877 44446333 121 333 556667776666 33 4677788773
No 373
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=92.85 E-value=9.1 Score=37.15 Aligned_cols=137 Identities=14% Similarity=0.131 Sum_probs=79.9
Q ss_pred EEEEEEECCCCCe---eeccc--cCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCC-CeEEE
Q 006375 107 YTVYVIDIETGTP---VGKPL--VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDD-IYSLG 179 (648)
Q Consensus 107 ~~l~v~dl~~g~~---~~~~~--~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~-~~~~~ 179 (648)
.+.-|||+++|.. .+.-+ +.-...++|+.+| .+|-+.. ....|..+||.... -.+.+|+.+.+ .-.+.
T Consensus 173 TTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvg----aDGSvRmFDLR~le-HSTIIYE~p~~~~pLlR 247 (364)
T KOG0290|consen 173 TTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVG----ADGSVRMFDLRSLE-HSTIIYEDPSPSTPLLR 247 (364)
T ss_pred CeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEec----CCCcEEEEEecccc-cceEEecCCCCCCccee
Confidence 4788889998733 22212 1123459999988 6654432 22347788887763 45678876652 23456
Q ss_pred EEeCCC-CcEEEEEEccccccEEEEEECCCCC-ceeEeeeccccee-eeEeecCCEEEEEeccCCCCCcEEEEEeCCC
Q 006375 180 LQASES-KKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 180 ~~~s~D-g~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 254 (648)
.+|.+. -++++- -..+.+++.++|+.-+. +...|......+. ..|.|....-.-+.. ...+....|+..
T Consensus 248 LswnkqDpnymAT--f~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaG----DD~qaliWDl~q 319 (364)
T KOG0290|consen 248 LSWNKQDPNYMAT--FAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAG----DDCQALIWDLQQ 319 (364)
T ss_pred eccCcCCchHHhh--hhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecC----CcceEEEEeccc
Confidence 777774 445432 23456889999998776 3333433333222 458887654433332 235777788865
No 374
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=92.83 E-value=0.31 Score=49.98 Aligned_cols=97 Identities=15% Similarity=0.085 Sum_probs=57.9
Q ss_pred EEEEecCCCCCCCCCCCchhHHHHHHCCCE---EEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCCC
Q 006375 408 LLLYGYGSYEICNDPAFNSSRLSLLDRGFI---FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 484 (648)
Q Consensus 408 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~---v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 484 (648)
.++++||.... ...|......+...|+. +..+++.+....+..+ ...+-+.+-++.+.... ..
T Consensus 61 pivlVhG~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~ql~~~V~~~l~~~--ga 126 (336)
T COG1075 61 PIVLVHGLGGG--YGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYSLA----------VRGEQLFAYVDEVLAKT--GA 126 (336)
T ss_pred eEEEEccCcCC--cchhhhhhhhhcchHHHhcccccccccccCCCcccc----------ccHHHHHHHHHHHHhhc--CC
Confidence 58888995222 22244444445555776 7777766542111111 12233444444444332 23
Q ss_pred CeEEEEeeChhHHHHHHHHhhCC--CceeEEEecCC
Q 006375 485 EKLCIEGRSAGGLLIGAVLNMRP--DLFKAAVAAVP 518 (648)
Q Consensus 485 ~~i~i~G~S~GG~l~~~~~~~~p--~~~~a~v~~~~ 518 (648)
.++.++||||||.++-.++...+ ..++.++...+
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCccceEEEEEEecc
Confidence 89999999999999988888877 67887776654
No 375
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=92.83 E-value=0.31 Score=35.89 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=28.5
Q ss_pred CCcceEEEEEeCCCCeEEeEEEEEeeC-ccccCCCCcEEEEecCCCCCCCC
Q 006375 372 NNYFTERKWASASDGTQIPICIVYRKN-LVKLDGSDPLLLYGYGSYEICND 421 (648)
Q Consensus 372 ~~~~~~~~~~~s~~g~~i~~~l~~~~~-~~~~~~~~P~vl~~hGg~~~~~~ 421 (648)
-.|.+|...+++.||--+.++-+.++. ......+.|.|++.||-.+++..
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 367889999999999988888776665 11235668999999997665543
No 376
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=92.82 E-value=2.1 Score=40.43 Aligned_cols=111 Identities=15% Similarity=0.058 Sum_probs=68.2
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee-ccccCccceeEEecCCeEEEEEeCCCCCCceEEEEECCC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~-~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
.+.++.+|+||++|..+- | ..|..+|.++=..+. -..+-...+.+-+|+..+|.. .++...+|.+|..+
T Consensus 186 ~VtSlEvs~dG~ilTia~---g---ssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVa----Gged~~~~kfDy~T 255 (334)
T KOG0278|consen 186 PVTSLEVSQDGRILTIAY---G---SSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVA----GGEDFKVYKFDYNT 255 (334)
T ss_pred CCcceeeccCCCEEEEec---C---ceeEEeccccccceeeccCccccccccccCCCceEEe----cCcceEEEEEeccC
Confidence 456788999999876542 3 267888887755442 223333334778888855443 35567799999999
Q ss_pred CCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEcc-ccccEEEEEEC
Q 006375 161 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASES-KITRFVFYLDV 206 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~-~~~~~l~~~dl 206 (648)
+ +++-.+......-..-+.+||||..- .+.+ .++-+||....
T Consensus 256 g--eEi~~~nkgh~gpVhcVrFSPdGE~y--AsGSEDGTirlWQt~~ 298 (334)
T KOG0278|consen 256 G--EEIGSYNKGHFGPVHCVRFSPDGELY--ASGSEDGTIRLWQTTP 298 (334)
T ss_pred C--ceeeecccCCCCceEEEEECCCCcee--eccCCCceEEEEEecC
Confidence 8 45555522223334457899999643 3333 34456666543
No 377
>PRK13613 lipoprotein LpqB; Provisional
Probab=92.79 E-value=11 Score=41.78 Aligned_cols=165 Identities=18% Similarity=0.177 Sum_probs=89.0
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCe----eecccc-CccceeEEecCCeEEEEEeCCCCCCceEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP----VGKPLV-GVTASVEWAGNEALVYITMDEILRPDKAWL 155 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~----~~~~~~-~~~~~~~WspDg~l~y~~~~~~~~~~~l~~ 155 (648)
..+..+.+|+||+.+|+... . ...+++-.+..+.. ...... .....++|.++|+++-. ........-|+.
T Consensus 363 ~~~~s~avS~~g~~~A~v~~-~---~~~l~vg~~~~~~~~~~~~~~~~~~~~Lt~PS~d~~g~vWtv-d~~~~~~~vl~v 437 (599)
T PRK13613 363 VPLRRVAVSRDESRAAGISA-D---GDSVYVGSLTPGASIGVHSWGVTADGRLTSPSWDGRGDLWVV-DRDPADPRLLWL 437 (599)
T ss_pred CCccceEEcCCCceEEEEcC-C---CcEEEEeccCCCCccccccceeeccCcccCCcCcCCCCEEEe-cCCCCCceEEEE
Confidence 45678999999999999843 2 24788877654443 111122 22456899988865533 211122222333
Q ss_pred EECCCCCCCcEEEEe-ecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECC---CCC----ceeEeeecccc-eeeeE
Q 006375 156 HKLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS---KPE----ELRVLTPRVVG-VDTAA 226 (648)
Q Consensus 156 ~~l~~~~~~~~~~~~-~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~---~~~----~~~~l~~~~~~-~~~~~ 226 (648)
.. .++. ...+-. .....-...+..|+||-++++.....+...||+--+. .+. .++.+...... ....|
T Consensus 438 ~~-~~G~--~~~V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~~~l~~~~~l~~~l~~v~~~~W 514 (599)
T PRK13613 438 LQ-GDGE--PVEVRTPELDGHRVVAVRVARDGVRVALIVEKDGRRSLQIGRIVRDAKAVVSVEEFRSLAPELEDVTDMSW 514 (599)
T ss_pred Ec-CCCc--EEEeeccccCCCEeEEEEECCCccEEEEEEecCCCcEEEEEEEEeCCCCcEEeeccEEeccCCCccceeEE
Confidence 33 2331 111111 1112235578999999999887766555666654332 222 12223222222 23457
Q ss_pred eecCCEEEEEeccCCCCCcEEEEEeCCCC
Q 006375 227 SHRGNHFFITRRSDELFNSELLACPVDNT 255 (648)
Q Consensus 227 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 255 (648)
..++. |+++... ...+..++++.+++.
T Consensus 515 ~~~~s-L~Vlg~~-~~~~~~v~~v~vdG~ 541 (599)
T PRK13613 515 AGDSQ-LVVLGRE-EGGVQQARYVQVDGS 541 (599)
T ss_pred cCCCE-EEEEecc-CCCCcceEEEecCCc
Confidence 77665 6554432 224567888888764
No 378
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=92.77 E-value=1.7 Score=45.13 Aligned_cols=106 Identities=19% Similarity=0.218 Sum_probs=65.9
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC-ccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 161 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~-~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~ 161 (648)
....+-|.| .||.... .| .+.|+|.++...+.....+ ..+-+.++||| .|+..+.| ..||++.+..+
T Consensus 411 ~~~~fhpsg-~va~Gt~-~G----~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d-----~~iyiy~Vs~~ 479 (626)
T KOG2106|consen 411 ECADFHPSG-VVAVGTA-TG----RWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHD-----NHIYIYRVSAN 479 (626)
T ss_pred eEeeccCcc-eEEEeec-cc----eEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCC-----CeEEEEEECCC
Confidence 345677888 6665543 23 7899999986665443333 35568999999 88776543 34787777665
Q ss_pred CCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEE
Q 006375 162 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYL 204 (648)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 204 (648)
.. ...........+...+.||+|++++.- ++ .+-+|..+
T Consensus 480 g~-~y~r~~k~~gs~ithLDwS~Ds~~~~~--~S-~d~eiLyW 518 (626)
T KOG2106|consen 480 GR-KYSRVGKCSGSPITHLDWSSDSQFLVS--NS-GDYEILYW 518 (626)
T ss_pred Cc-EEEEeeeecCceeEEeeecCCCceEEe--cc-CceEEEEE
Confidence 32 222222222356667899999999863 33 33455444
No 379
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=92.75 E-value=10 Score=36.84 Aligned_cols=254 Identities=11% Similarity=0.085 Sum_probs=122.3
Q ss_pred EEEeeEEeC--CC-CCEEEEEEeCC-CCeEEEEEEEECCCCCeeecc-ccCc--cceeEEecCC-eEEEEEe-CCCCCCc
Q 006375 81 YSVGCFQVS--PD-NKLVAYAEDTK-GDEIYTVYVIDIETGTPVGKP-LVGV--TASVEWAGNE-ALVYITM-DEILRPD 151 (648)
Q Consensus 81 ~~~~~~~~S--PD-G~~la~~~~~~-G~e~~~l~v~dl~~g~~~~~~-~~~~--~~~~~WspDg-~l~y~~~-~~~~~~~ 151 (648)
+.+.++.|| || .-+||..+-.. -+-+.+|.-.|.++++.+.+. ++.. ..-+.|.||. ..+ ... ......-
T Consensus 45 ~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~-pdlLATs~D~L 123 (364)
T KOG0290|consen 45 WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVY-PDLLATSSDFL 123 (364)
T ss_pred CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccC-cchhhcccCeE
Confidence 445566677 44 44677664221 112456666677788877543 2222 3458899997 442 111 0112223
Q ss_pred eEEEEECCCCCCCcEEEEee-cCCCe---EEEEEeCC-CCcEEEEEEccccccEEEEEECCCCC----ceeEeeecccce
Q 006375 152 KAWLHKLEADQSNDICLYHE-KDDIY---SLGLQASE-SKKFLFIASESKITRFVFYLDVSKPE----ELRVLTPRVVGV 222 (648)
Q Consensus 152 ~l~~~~l~~~~~~~~~~~~~-~~~~~---~~~~~~s~-Dg~~l~~~~~~~~~~~l~~~dl~~~~----~~~~l~~~~~~~ 222 (648)
+||+...+........++.. ....+ ..++.|.. |-++| .+++-.++--|| |++++. +.+++.....-.
T Consensus 124 RlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~i-gtSSiDTTCTiW--die~~~~~~vkTQLIAHDKEV~ 200 (364)
T KOG0290|consen 124 RLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLI-GTSSIDTTCTIW--DIETGVSGTVKTQLIAHDKEVY 200 (364)
T ss_pred EEEeccCcCCceehhhhhccCcccccCCcccccccccCCccee-EeecccCeEEEE--EEeeccccceeeEEEecCccee
Confidence 34444332221111111111 11111 23456665 44444 444444455555 555542 355666555555
Q ss_pred eeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCC-CcccceEEEeCC-EEEEEEecCCeeEEEEEEcCCC
Q 006375 223 DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE-SVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAV 300 (648)
Q Consensus 223 ~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~l~~~~~~~~~~~l~v~~~~~~ 300 (648)
+..|+..|..++..-..+ +.+...|+......+.+..... ...+..++|.+. --++........++.++++...
T Consensus 201 DIaf~~~s~~~FASvgaD----GSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P 276 (364)
T KOG0290|consen 201 DIAFLKGSRDVFASVGAD----GSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVP 276 (364)
T ss_pred EEEeccCccceEEEecCC----CcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCC
Confidence 667888666665554433 4566677766444443333222 445666777663 2233333334456777776543
Q ss_pred CCcccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECC
Q 006375 301 GEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMD 353 (648)
Q Consensus 301 g~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~ 353 (648)
...+. .+-....+|.++.+.+.+..-+++.... .+...+|+.
T Consensus 277 ~tpva--------~L~~H~a~VNgIaWaPhS~~hictaGDD---~qaliWDl~ 318 (364)
T KOG0290|consen 277 CTPVA--------RLRNHQASVNGIAWAPHSSSHICTAGDD---CQALIWDLQ 318 (364)
T ss_pred Cccee--------hhhcCcccccceEecCCCCceeeecCCc---ceEEEEecc
Confidence 32211 1222233455666666666555544332 234445554
No 380
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=92.70 E-value=13 Score=38.08 Aligned_cols=198 Identities=10% Similarity=0.087 Sum_probs=98.0
Q ss_pred CceEEEeccccc-----CCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee--eccccCccceeEEecC
Q 006375 64 PEHLILDENVKA-----EGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV--GKPLVGVTASVEWAGN 136 (648)
Q Consensus 64 ~~~~lld~n~~~-----~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~--~~~~~~~~~~~~WspD 136 (648)
.+.|++|-.... +|| .-.+....++||...++-.+. ...|+||.+-..... ....+.......-.|.
T Consensus 241 ~~av~~d~~s~q~l~~~~Gh-~kki~~v~~~~~~~~v~~aSa-----d~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~t 314 (506)
T KOG0289|consen 241 KTAVLFDKPSNQILATLKGH-TKKITSVKFHKDLDTVITASA-----DEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPT 314 (506)
T ss_pred CceEEEecchhhhhhhccCc-ceEEEEEEeccchhheeecCC-----cceEEeeccccccCccccccccccceeeeeccC
Confidence 456778854322 222 456778899999987664432 457777766443321 1122222233444555
Q ss_pred C-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEee-cCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeE
Q 006375 137 E-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV 214 (648)
Q Consensus 137 g-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~ 214 (648)
| +|+-...+. ..-..++.++ .-..+... ....-.....+.||| ++|.... .++.|-++|+..+.....
T Consensus 315 geYllsAs~d~-----~w~Fsd~~~g--~~lt~vs~~~s~v~~ts~~fHpDg--Lifgtgt-~d~~vkiwdlks~~~~a~ 384 (506)
T KOG0289|consen 315 GEYLLSASNDG-----TWAFSDISSG--SQLTVVSDETSDVEYTSAAFHPDG--LIFGTGT-PDGVVKIWDLKSQTNVAK 384 (506)
T ss_pred CcEEEEecCCc-----eEEEEEccCC--cEEEEEeeccccceeEEeeEcCCc--eEEeccC-CCceEEEEEcCCcccccc
Confidence 5 443322211 0112334443 11222211 111223367899999 4443332 346788889887652222
Q ss_pred eeecccce-eeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEE--eCCEEEEE
Q 006375 215 LTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQL--FIDHLAVY 283 (648)
Q Consensus 215 l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~ 283 (648)
.-.....+ ...|+.+|=||+..+++ ..+...|+.+....+ .++-++...+.++++ .+.++...
T Consensus 385 Fpght~~vk~i~FsENGY~Lat~add-----~~V~lwDLRKl~n~k-t~~l~~~~~v~s~~fD~SGt~L~~~ 450 (506)
T KOG0289|consen 385 FPGHTGPVKAISFSENGYWLATAADD-----GSVKLWDLRKLKNFK-TIQLDEKKEVNSLSFDQSGTYLGIA 450 (506)
T ss_pred CCCCCCceeEEEeccCceEEEEEecC-----CeEEEEEehhhcccc-eeeccccccceeEEEcCCCCeEEee
Confidence 22222222 34588888777666664 237777887644333 222232223444444 45555544
No 381
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=92.66 E-value=8 Score=42.43 Aligned_cols=192 Identities=17% Similarity=0.132 Sum_probs=96.4
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECC-----CCCe---------eeccccCccceeEEecCC-eEEEEEeC
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE-----TGTP---------VGKPLVGVTASVEWAGNE-ALVYITMD 145 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~-----~g~~---------~~~~~~~~~~~~~WspDg-~l~y~~~~ 145 (648)
-.+..++.+||++..+-.+ ...+|.+||.. .|.. +...+++-...++.|||| .++..-.|
T Consensus 455 gaIWsi~~~pD~~g~vT~s-----aDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLd 529 (888)
T KOG0306|consen 455 GAIWSISLSPDNKGFVTGS-----ADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLD 529 (888)
T ss_pred cceeeeeecCCCCceEEec-----CCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEecc
Confidence 4678889999999876432 23466666543 1221 122345545569999999 55544333
Q ss_pred CCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccce-ee
Q 006375 146 EILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DT 224 (648)
Q Consensus 146 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~-~~ 224 (648)
. ..+||.+| +- +=-..+|...-|.. ....|||++.|+-.+.+ -+-.+|=+| =|.=-+-+..+.+.+ ..
T Consensus 530 n---TVkVyflD--tl-KFflsLYGHkLPV~--smDIS~DSklivTgSAD-KnVKiWGLd--FGDCHKS~fAHdDSvm~V 598 (888)
T KOG0306|consen 530 N---TVKVYFLD--TL-KFFLSLYGHKLPVL--SMDISPDSKLIVTGSAD-KNVKIWGLD--FGDCHKSFFAHDDSVMSV 598 (888)
T ss_pred C---eEEEEEec--ce-eeeeeeccccccee--EEeccCCcCeEEeccCC-CceEEeccc--cchhhhhhhcccCceeEE
Confidence 2 34455543 33 11234554443433 45679999877643332 223444444 343011223333332 23
Q ss_pred eEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCE-EEEEEecCCeeEEEEEEc
Q 006375 225 AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRL 297 (648)
Q Consensus 225 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~l~v~~~ 297 (648)
.+-| ..+++|+..++ .++-..|.++....+.+-.|... +.......++ .++...++- .|++|..
T Consensus 599 ~F~P-~~~~FFt~gKD----~kvKqWDg~kFe~iq~L~~H~~e--v~cLav~~~G~~vvs~shD~--sIRlwE~ 663 (888)
T KOG0306|consen 599 QFLP-KTHLFFTCGKD----GKVKQWDGEKFEEIQKLDGHHSE--VWCLAVSPNGSFVVSSSHDK--SIRLWER 663 (888)
T ss_pred EEcc-cceeEEEecCc----ceEEeechhhhhhheeeccchhe--eeeeEEcCCCCeEEeccCCc--eeEeeec
Confidence 4666 45677887764 46666776554333323333322 3334444443 334444433 3444443
No 382
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=92.61 E-value=12 Score=38.75 Aligned_cols=58 Identities=7% Similarity=0.085 Sum_probs=40.1
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC--ccceeEEecCCeEEEEEeC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNEALVYITMD 145 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~--~~~~~~WspDg~l~y~~~~ 145 (648)
+..+.-||+|.+|+-. .+.-+||+|.+.+|..+..-... ...-+.|+.||..+++...
T Consensus 84 v~al~s~n~G~~l~ag-----~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgsk 143 (476)
T KOG0646|consen 84 VHALASSNLGYFLLAG-----TISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSK 143 (476)
T ss_pred eeeeecCCCceEEEee-----cccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCC
Confidence 5677889999988743 24458999999999977422111 1345889999966666653
No 383
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=92.58 E-value=2.4 Score=42.88 Aligned_cols=215 Identities=13% Similarity=0.095 Sum_probs=115.2
Q ss_pred CCceEEEecccc----cCCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCe-eeccccCc-cceeEEecC
Q 006375 63 PPEHLILDENVK----AEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGKPLVGV-TASVEWAGN 136 (648)
Q Consensus 63 ~~~~~lld~n~~----~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~-~~~~~~~~-~~~~~WspD 136 (648)
++-.-..+||-- ...+..-++..+++||.-.+.+=.++ + .+|.|||..-.+. +.....+. ...+.|.|.
T Consensus 159 gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~Sd-D----g~ikiWdf~~~kee~vL~GHgwdVksvdWHP~ 233 (464)
T KOG0284|consen 159 GGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSD-D----GTIKIWDFRMPKEERVLRGHGWDVKSVDWHPT 233 (464)
T ss_pred CceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecC-C----CeEEEEeccCCchhheeccCCCCcceeccCCc
Confidence 344445666531 11233457889999995554443222 2 3789999765443 22233332 345999999
Q ss_pred CeEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEee
Q 006375 137 EALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT 216 (648)
Q Consensus 137 g~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~ 216 (648)
-.++++...++ -|-++|..++. -..-.. ......+.+.|++++.||+-.+. +..+.++|+.+.+++....
T Consensus 234 kgLiasgskDn----lVKlWDprSg~--cl~tlh-~HKntVl~~~f~~n~N~Llt~sk---D~~~kv~DiR~mkEl~~~r 303 (464)
T KOG0284|consen 234 KGLIASGSKDN----LVKLWDPRSGS--CLATLH-GHKNTVLAVKFNPNGNWLLTGSK---DQSCKVFDIRTMKELFTYR 303 (464)
T ss_pred cceeEEccCCc----eeEeecCCCcc--hhhhhh-hccceEEEEEEcCCCCeeEEccC---CceEEEEehhHhHHHHHhh
Confidence 87766655432 46677777662 222111 12345567899999988874333 2467788887544344343
Q ss_pred ecccc-eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeC-CEEEEEEecCCeeEEEE
Q 006375 217 PRVVG-VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITT 294 (648)
Q Consensus 217 ~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~l~v 294 (648)
..... ....|.|-...|+.+...+ ..|+...+.. .+....++...+..|-++.+-+ .+|+....++...+.+.
T Consensus 304 ~Hkkdv~~~~WhP~~~~lftsgg~D----gsvvh~~v~~-~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 304 GHKKDVTSLTWHPLNESLFTSGGSD----GSVVHWVVGL-EEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWT 378 (464)
T ss_pred cchhhheeeccccccccceeeccCC----CceEEEeccc-cccccCCCcccccceeeeeccccceeEeecCCCcceeeec
Confidence 33333 2345888777665543332 2343333321 1122234444444566666655 45655555554445554
Q ss_pred EEc
Q 006375 295 YRL 297 (648)
Q Consensus 295 ~~~ 297 (648)
...
T Consensus 379 r~r 381 (464)
T KOG0284|consen 379 RNR 381 (464)
T ss_pred cCC
Confidence 433
No 384
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=92.56 E-value=4.7 Score=39.51 Aligned_cols=147 Identities=12% Similarity=0.065 Sum_probs=76.9
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC--ccceeEEecCC-eEEEEEeCCCCCCceEEEEEC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~--~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l 158 (648)
.+.++-+.-.+++|+-.+. ..+|.+|+++ |+.+.....+ .....+-|||| .|+...+.. .-.||..-.
T Consensus 189 ~~i~iGiA~~~k~imsas~-----dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTp---DVkVwE~~f 259 (420)
T KOG2096|consen 189 DIINIGIAGNAKYIMSASL-----DTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTP---DVKVWEPIF 259 (420)
T ss_pred ceEEEeecCCceEEEEecC-----CCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCC---CceEEEEEe
Confidence 3444556667777664432 3589999998 6666432222 23457889999 555544422 233554333
Q ss_pred CCCC--CCcEEEEeecC-CCeEEEEEeCCCCcEEEEEEccccccEEEEEECCC--CCceeEeeec--------ccceeee
Q 006375 159 EADQ--SNDICLYHEKD-DIYSLGLQASESKKFLFIASESKITRFVFYLDVSK--PEELRVLTPR--------VVGVDTA 225 (648)
Q Consensus 159 ~~~~--~~~~~~~~~~~-~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~--~~~~~~l~~~--------~~~~~~~ 225 (648)
+.+. .+-..+|+-.. ..-...+++|++.+.++- .+..+.-+||-.|..= ++.+..|... .......
T Consensus 260 ~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vt-vSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~ 338 (420)
T KOG2096|consen 260 TKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVT-VSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLE 338 (420)
T ss_pred ccCcchhhhhhhheeccchhheeeeeeCCCcceeEE-EecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEE
Confidence 3221 12233443322 122345678898888763 3444455666554421 1112222111 1123456
Q ss_pred EeecCCEEEEEec
Q 006375 226 ASHRGNHFFITRR 238 (648)
Q Consensus 226 ~s~dg~~l~~~~~ 238 (648)
.+|.|+.|+....
T Consensus 339 lsP~g~~lA~s~g 351 (420)
T KOG2096|consen 339 LSPSGDSLAVSFG 351 (420)
T ss_pred eCCCCcEEEeecC
Confidence 8999997776654
No 385
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=92.55 E-value=0.5 Score=51.77 Aligned_cols=74 Identities=19% Similarity=0.201 Sum_probs=52.2
Q ss_pred ceEEEeccccc-----CCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCC-
Q 006375 65 EHLILDENVKA-----EGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE- 137 (648)
Q Consensus 65 ~~~lld~n~~~-----~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg- 137 (648)
.-+++|.-+.. .+| .-.+..+.+|||||+|+-+... ..|++||+.+|....- ..+....++.+||.|
T Consensus 557 ~I~vvD~~t~kvvR~f~gh-~nritd~~FS~DgrWlisasmD-----~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD 630 (910)
T KOG1539|consen 557 SIRVVDVVTRKVVREFWGH-GNRITDMTFSPDGRWLISASMD-----STIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGD 630 (910)
T ss_pred eEEEEEchhhhhhHHhhcc-ccceeeeEeCCCCcEEEEeecC-----CcEEEEeccCcceeeeEecCCcceeeEECCCCC
Confidence 34667866432 122 3478899999999999877642 4899999999987642 345556679999999
Q ss_pred eEEEEEe
Q 006375 138 ALVYITM 144 (648)
Q Consensus 138 ~l~y~~~ 144 (648)
.|+-+-.
T Consensus 631 ~LAT~Hv 637 (910)
T KOG1539|consen 631 FLATVHV 637 (910)
T ss_pred EEEEEEe
Confidence 6655443
No 386
>KOG4328 consensus WD40 protein [Function unknown]
Probab=92.40 E-value=14 Score=38.08 Aligned_cols=195 Identities=14% Similarity=0.135 Sum_probs=106.8
Q ss_pred EEEeeEEeCCCCC-EEEEEEeCCCCeEEEEEEEECCCCCeeecc-----cc-CccceeEEecCC--eEEEEEeCCCCCCc
Q 006375 81 YSVGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDIETGTPVGKP-----LV-GVTASVEWAGNE--ALVYITMDEILRPD 151 (648)
Q Consensus 81 ~~~~~~~~SPDG~-~la~~~~~~G~e~~~l~v~dl~~g~~~~~~-----~~-~~~~~~~WspDg--~l~y~~~~~~~~~~ 151 (648)
-++..+.|-|-.. .|..+-+..| +|-+||+.+.+...+. .. ...+++.|+|.+ .|+-++++..
T Consensus 187 ~Rit~l~fHPt~~~~lva~GdK~G----~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGt---- 258 (498)
T KOG4328|consen 187 RRITSLAFHPTENRKLVAVGDKGG----QVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGT---- 258 (498)
T ss_pred cceEEEEecccCcceEEEEccCCC----cEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCce----
Confidence 4677888999876 5555556656 8999999754443221 11 125668999988 6666655542
Q ss_pred eEEEEECCCCCCCcEEEEee-cCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-cee--EeeecccceeeeEe
Q 006375 152 KAWLHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELR--VLTPRVVGVDTAAS 227 (648)
Q Consensus 152 ~l~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~--~l~~~~~~~~~~~s 227 (648)
+...++.+...+ .++.. .+..++.+..++.+.+.+++..+-+ ..-++|+.++. +.. .+... .-....+.
T Consensus 259 -iR~~D~~~~i~e--~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G---~f~~iD~R~~~s~~~~~~lh~k-KI~sv~~N 331 (498)
T KOG4328|consen 259 -IRLQDFEGNISE--EVLSLDTDNIWFSSLDFSAESRSVLFGDNVG---NFNVIDLRTDGSEYENLRLHKK-KITSVALN 331 (498)
T ss_pred -eeeeeecchhhH--HHhhcCccceeeeeccccCCCccEEEeeccc---ceEEEEeecCCccchhhhhhhc-ccceeecC
Confidence 667777776432 23322 2345666778888888877754433 34455555443 122 22222 11234467
Q ss_pred ecCCEEEEEeccCCCCCcEEEEEeCCCCCcce--e--EecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEc
Q 006375 228 HRGNHFFITRRSDELFNSELLACPVDNTSETT--V--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRL 297 (648)
Q Consensus 228 ~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~ 297 (648)
|...+++.++..+ ..+.+.|+....... . .+++...+...-|++++..++-... ...|+|++.
T Consensus 332 P~~p~~laT~s~D----~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~---D~~IRv~ds 398 (498)
T KOG4328|consen 332 PVCPWFLATASLD----QTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQ---DNEIRVFDS 398 (498)
T ss_pred CCCchheeecccC----cceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeecc---CCceEEeec
Confidence 7777766655443 233445554321111 1 4445544444445666656433332 246777765
No 387
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=92.39 E-value=1.5 Score=42.91 Aligned_cols=132 Identities=20% Similarity=0.271 Sum_probs=79.5
Q ss_pred ceEEEecccccCCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee----eccccCccceeEEecCC-eE
Q 006375 65 EHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV----GKPLVGVTASVEWAGNE-AL 139 (648)
Q Consensus 65 ~~~lld~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~----~~~~~~~~~~~~WspDg-~l 139 (648)
..||+-.|.-+ ..+.|||.++++|..+ |.....|+-+.-+..=.+ ..++......+.|.|++ -+
T Consensus 93 tlvLlRiNrAA--------t~V~WsP~enkFAVgS---gar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLl 161 (361)
T KOG1523|consen 93 TLVLLRINRAA--------TCVKWSPKENKFAVGS---GARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLL 161 (361)
T ss_pred ceeEEEeccce--------eeEeecCcCceEEecc---CccEEEEEEEecccceehhhhhCCccccceeeeeccCCccee
Confidence 34666555433 4789999999999764 332333333332221111 22445555679999999 77
Q ss_pred EEEEeCCCCCCceEEEEECCCCCCC----cEEEE-----ee-cCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCC
Q 006375 140 VYITMDEILRPDKAWLHKLEADQSN----DICLY-----HE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 209 (648)
Q Consensus 140 ~y~~~~~~~~~~~l~~~~l~~~~~~----~~~~~-----~~-~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~ 209 (648)
+..+.|..-+-...|+-.++...+. .++.| +- ..+.|..++.|||+|..|.+...+ +-+++.|..++
T Consensus 162 aaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hd---s~v~~~da~~p 238 (361)
T KOG1523|consen 162 AAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHD---STVSFVDAAGP 238 (361)
T ss_pred cccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCC---CceEEeecCCC
Confidence 6666665555566777777765321 11111 11 235567788999999999886543 44677777666
Q ss_pred C
Q 006375 210 E 210 (648)
Q Consensus 210 ~ 210 (648)
.
T Consensus 239 ~ 239 (361)
T KOG1523|consen 239 S 239 (361)
T ss_pred c
Confidence 4
No 388
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=92.37 E-value=1.2 Score=46.62 Aligned_cols=118 Identities=19% Similarity=0.152 Sum_probs=72.7
Q ss_pred CCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHCCCE-EEEEccCCCCC---CChhhhhccccc
Q 006375 385 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFI-FAIAQIRGGGE---LGRQWYENGKFL 460 (648)
Q Consensus 385 ~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~-v~~~~~rG~g~---~g~~~~~~~~~~ 460 (648)
.+.++-.+ +.|-+. |.|+.||+-|--. ..+|.... .+-..|.- .++-|.|--|| .|.+-++
T Consensus 274 ~reEi~yY-FnPGD~-----KPPL~VYFSGyR~---aEGFEgy~-MMk~Lg~PfLL~~DpRleGGaFYlGs~eyE----- 338 (511)
T TIGR03712 274 KRQEFIYY-FNPGDF-----KPPLNVYFSGYRP---AEGFEGYF-MMKRLGAPFLLIGDPRLEGGAFYLGSDEYE----- 338 (511)
T ss_pred CCCeeEEe-cCCcCC-----CCCeEEeeccCcc---cCcchhHH-HHHhcCCCeEEeeccccccceeeeCcHHHH-----
Confidence 35555444 666554 5699999988322 34455322 22233544 56678885443 1332221
Q ss_pred CCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccc
Q 006375 461 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT 525 (648)
Q Consensus 461 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~ 525 (648)
+-++..++...+.-..+.+.+.+.|.|||.+-|+..++.- ..+|+|..-|++++-+.
T Consensus 339 ------~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l--~P~AIiVgKPL~NLGti 395 (511)
T TIGR03712 339 ------QGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL--SPHAIIVGKPLVNLGTI 395 (511)
T ss_pred ------HHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC--CCceEEEcCcccchhhh
Confidence 2344444433333235789999999999999999888864 24789999999986543
No 389
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=92.33 E-value=0.34 Score=42.45 Aligned_cols=38 Identities=18% Similarity=0.314 Sum_probs=28.1
Q ss_pred HhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhh
Q 006375 466 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 505 (648)
Q Consensus 466 ~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 505 (648)
.+.+...++.+.++.. +.+|.+.|||+||.+|..++..
T Consensus 47 ~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 3466666666666544 4899999999999988766654
No 390
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=92.29 E-value=15 Score=37.86 Aligned_cols=58 Identities=21% Similarity=0.155 Sum_probs=38.3
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec--cccCccceeEEecCC-eEEEEEe
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE-ALVYITM 144 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~~~~~~WspDg-~l~y~~~ 144 (648)
.+-.+.+||||+|||..- . ...|.||+.++.+.+.. ...+...+.+|-..- .+|-.+.
T Consensus 204 eil~~avS~Dgkylatgg----~-d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~ 264 (479)
T KOG0299|consen 204 EILTLAVSSDGKYLATGG----R-DRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASA 264 (479)
T ss_pred eeEEEEEcCCCcEEEecC----C-CceEEEecCcccchhhcccccccceeeeeeecCccceeeeec
Confidence 455789999999999752 1 35788999999987753 123344557775443 5544443
No 391
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=91.78 E-value=12 Score=43.89 Aligned_cols=105 Identities=12% Similarity=0.133 Sum_probs=63.4
Q ss_pred eEEeCCCCCEEEEEEe--CCCCeEEEEEEEECCCCCee--eccccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECC
Q 006375 85 CFQVSPDNKLVAYAED--TKGDEIYTVYVIDIETGTPV--GKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~--~~G~e~~~l~v~dl~~g~~~--~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
.++|-.||+++|.+.- ..| .+-.|+|++-+ |+.. ....++....++|.|.| .|+-+.. ..++ .+|..+.-.
T Consensus 214 ~ISWRGDG~yFAVss~~~~~~-~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~-~~~~-~~VvFfErN 289 (928)
T PF04762_consen 214 RISWRGDGEYFAVSSVEPETG-SRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQR-LPDR-HDVVFFERN 289 (928)
T ss_pred EEEECCCCcEEEEEEEEcCCC-ceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEE-cCCC-cEEEEEecC
Confidence 5689999999999864 233 36789999876 4433 23456667789999999 6655443 2222 444444333
Q ss_pred CCCC-CcEEEEeecCCCeEEEEEeCCCCcEEEEEEc
Q 006375 160 ADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASE 194 (648)
Q Consensus 160 ~~~~-~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~ 194 (648)
+-.- +-.+.+ .....-...+.|++|+.-|++...
T Consensus 290 GLrhgeF~l~~-~~~~~~v~~l~Wn~ds~iLAv~~~ 324 (928)
T PF04762_consen 290 GLRHGEFTLRF-DPEEEKVIELAWNSDSEILAVWLE 324 (928)
T ss_pred CcEeeeEecCC-CCCCceeeEEEECCCCCEEEEEec
Confidence 2211 111111 112223457899999999988653
No 392
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=91.76 E-value=13 Score=40.76 Aligned_cols=106 Identities=13% Similarity=0.218 Sum_probs=57.2
Q ss_pred EEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc---c--eeeeEeecCCEEEEEeccCCCCCcEEEEEeCC
Q 006375 179 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV---G--VDTAASHRGNHFFITRRSDELFNSELLACPVD 253 (648)
Q Consensus 179 ~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~---~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 253 (648)
+..+.|..++++.... +..|.+++++.++ .++..++.. | +....+|.| +|+.+.- .+..|..+|..
T Consensus 601 Dm~Vdp~~k~v~t~cQ---Drnirif~i~sgK-q~k~FKgs~~~eG~lIKv~lDPSg--iY~atSc---sdktl~~~Df~ 671 (1080)
T KOG1408|consen 601 DMAVDPTSKLVVTVCQ---DRNIRIFDIESGK-QVKSFKGSRDHEGDLIKVILDPSG--IYLATSC---SDKTLCFVDFV 671 (1080)
T ss_pred EeeeCCCcceEEEEec---ccceEEEeccccc-eeeeecccccCCCceEEEEECCCc--cEEEEee---cCCceEEEEec
Confidence 4556677777665443 3468888999887 555554322 2 123466666 4555443 22468888876
Q ss_pred CCCcceeEecCCCCcccceEEEeCC--EEEEEEecCCeeEEEEEEcC
Q 006375 254 NTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLP 298 (648)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~l~v~~~~ 298 (648)
.++-.-..+.|.+- +.++.+.+| +++ ...-+ .-|.+|.++
T Consensus 672 sgEcvA~m~GHsE~--VTG~kF~nDCkHlI-SvsgD--gCIFvW~lp 713 (1080)
T KOG1408|consen 672 SGECVAQMTGHSEA--VTGVKFLNDCKHLI-SVSGD--GCIFVWKLP 713 (1080)
T ss_pred cchhhhhhcCcchh--eeeeeecccchhhe-eecCC--ceEEEEECc
Confidence 53222114445443 455666554 433 33333 345666665
No 393
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=91.71 E-value=3.6 Score=41.69 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=73.2
Q ss_pred EEEEEECCCCCeee-ccccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCC---CeEEEEEe
Q 006375 108 TVYVIDIETGTPVG-KPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDD---IYSLGLQA 182 (648)
Q Consensus 108 ~l~v~dl~~g~~~~-~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~ 182 (648)
.|+.||..++..+. .+..+...++.-++|| .++-.+.++ -+-.+++.+. +-...|....- .-...+.+
T Consensus 323 kvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDd-----tl~viDlRt~--eI~~~~sA~g~k~asDwtrvvf 395 (459)
T KOG0288|consen 323 KVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDD-----TLKVIDLRTK--EIRQTFSAEGFKCASDWTRVVF 395 (459)
T ss_pred ceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCC-----ceeeeecccc--cEEEEeeccccccccccceeEE
Confidence 58999988877654 2445556668899999 776543332 2556777665 33444433211 11224679
Q ss_pred CCCCcEEEEEEccccccEEEEEECCCCCceeEeee--ccc-ce-eeeEeecCCEEEEEec
Q 006375 183 SESKKFLFIASESKITRFVFYLDVSKPEELRVLTP--RVV-GV-DTAASHRGNHFFITRR 238 (648)
Q Consensus 183 s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~--~~~-~~-~~~~s~dg~~l~~~~~ 238 (648)
|||++|++..+. +..||+++..+++ ...+.. ... ++ ...|++.|..++-..+
T Consensus 396 Spd~~YvaAGS~---dgsv~iW~v~tgK-lE~~l~~s~s~~aI~s~~W~~sG~~Llsadk 451 (459)
T KOG0288|consen 396 SPDGSYVAAGSA---DGSVYIWSVFTGK-LEKVLSLSTSNAAITSLSWNPSGSGLLSADK 451 (459)
T ss_pred CCCCceeeeccC---CCcEEEEEccCce-EEEEeccCCCCcceEEEEEcCCCchhhcccC
Confidence 999999986443 3569999999987 333322 222 22 3458888876654433
No 394
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=91.37 E-value=0.76 Score=46.04 Aligned_cols=120 Identities=18% Similarity=0.180 Sum_probs=71.8
Q ss_pred CCeEEeEEEEEeeCccccCCCCcEEEEecCCCCCCCCCCCchhHHHHHHC---------CCEEEEEccCCCCCCChhhhh
Q 006375 385 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR---------GFIFAIAQIRGGGELGRQWYE 455 (648)
Q Consensus 385 ~g~~i~~~l~~~~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~---------G~~v~~~~~rG~g~~g~~~~~ 455 (648)
.|.+|+...+.|++. +..++.--||++||-+|+-.+ |-..+..|.+- -|-|++|...|=| |.+
T Consensus 132 eGL~iHFlhvk~p~~-k~~k~v~PlLl~HGwPGsv~E--FykfIPlLT~p~~hg~~~d~~FEVI~PSlPGyg-----wSd 203 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQK-KKKKKVKPLLLLHGWPGSVRE--FYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYG-----WSD 203 (469)
T ss_pred cceeEEEEEecCCcc-ccCCcccceEEecCCCchHHH--HHhhhhhhcCccccCCccceeEEEeccCCCCcc-----cCc
Confidence 577787766666654 333333347888998876443 33333333331 3678899888533 443
Q ss_pred cccccCCCCcHhHHHHHHHHH-HHcCCCCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecC
Q 006375 456 NGKFLKKKNTFTDFIACAEYL-IKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV 517 (648)
Q Consensus 456 ~~~~~~~~~~~~D~~~~~~~l-~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~ 517 (648)
+.. ..+-+.. .+..+++-| ...|+ ++..|-|+-+|..++..++.-+|+.+.+.=+..
T Consensus 204 ~~s-k~GFn~~-a~ArvmrkLMlRLg~---nkffiqGgDwGSiI~snlasLyPenV~GlHlnm 261 (469)
T KOG2565|consen 204 APS-KTGFNAA-ATARVMRKLMLRLGY---NKFFIQGGDWGSIIGSNLASLYPENVLGLHLNM 261 (469)
T ss_pred CCc-cCCccHH-HHHHHHHHHHHHhCc---ceeEeecCchHHHHHHHHHhhcchhhhHhhhcc
Confidence 211 1111222 222333333 34455 799999999999999999999999776644333
No 395
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=91.30 E-value=17 Score=38.00 Aligned_cols=157 Identities=17% Similarity=0.153 Sum_probs=94.2
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee-cccc-C-ccceeEEecCC-eEEEEEeCCCCCCceEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLV-G-VTASVEWAGNE-ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~-~~~~-~-~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~ 156 (648)
-.+..+...-...|||-.++ +| +|-|..++++.... ..++ + ...-+.++|-. .++-+..+. ..|.++
T Consensus 122 stvt~v~YN~~DeyiAsvs~-gG----diiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~----G~Vtlw 192 (673)
T KOG4378|consen 122 STVTYVDYNNTDEYIASVSD-GG----DIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDK----GAVTLW 192 (673)
T ss_pred ceeEEEEecCCcceeEEecc-CC----cEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccC----CeEEEE
Confidence 45556666667777776554 33 68888888876543 2333 2 23347788888 554444332 236677
Q ss_pred ECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEE
Q 006375 157 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFIT 236 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~ 236 (648)
|+.+. ....-+.+....-..++.+||....|+++. +-+..|+++|.........|+-..+-....++++|-+|..-
T Consensus 193 Dv~g~--sp~~~~~~~HsAP~~gicfspsne~l~vsV--G~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG 268 (673)
T KOG4378|consen 193 DVQGM--SPIFHASEAHSAPCRGICFSPSNEALLVSV--GYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAG 268 (673)
T ss_pred eccCC--CcccchhhhccCCcCcceecCCccceEEEe--cccceEEEeecccccccceeeecCCcceeeecCCceEEEee
Confidence 77654 222223222222234678899888887654 34578999998765523334333233345688998766543
Q ss_pred eccCCCCCcEEEEEeCCCC
Q 006375 237 RRSDELFNSELLACPVDNT 255 (648)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~ 255 (648)
+ .+++|+.+|+...
T Consensus 269 ~-----s~G~~i~YD~R~~ 282 (673)
T KOG4378|consen 269 N-----SKGELIAYDMRST 282 (673)
T ss_pred c-----CCceEEEEecccC
Confidence 3 3579999999763
No 396
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=91.28 E-value=13 Score=34.99 Aligned_cols=56 Identities=23% Similarity=0.176 Sum_probs=33.3
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cc-cCccceeEEecCCeEEEEE
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNEALVYIT 143 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~-~~~~~~~~WspDg~l~y~~ 143 (648)
+-....|-|..++|- . |. .-.+++||++||+.... .. .+....+.|..++.++++.
T Consensus 62 VlD~~~s~Dnskf~s---~-Gg-Dk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~Sg 119 (307)
T KOG0316|consen 62 VLDAALSSDNSKFAS---C-GG-DKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASG 119 (307)
T ss_pred eeecccccccccccc---C-CC-CceEEEEEcccCeeeeecccccceeeEEEecCcceEEEec
Confidence 334566777777662 2 33 45799999999987642 11 1123447776666555543
No 397
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=91.27 E-value=22 Score=41.60 Aligned_cols=115 Identities=11% Similarity=0.078 Sum_probs=60.1
Q ss_pred EEEeCCCCcEEEEEEccc--cccEEEEEECCCCCceeEeeecccc--eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCC
Q 006375 179 GLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 179 ~~~~s~Dg~~l~~~~~~~--~~~~l~~~dl~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 254 (648)
.++|--||++++++.... +...|.++|.+ +. +........+ ....|-|.|..++..-... .. .+|....-++
T Consensus 200 ~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~-Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~-sd-~~IvffErNG 275 (1265)
T KOG1920|consen 200 SISWRGDGEYFAVSFVESETGTRKIRVYDRE-GA-LNSTSEPVEGLQHSLSWKPSGSLIAAIQCKT-SD-SDIVFFERNG 275 (1265)
T ss_pred eEEEccCCcEEEEEEEeccCCceeEEEeccc-ch-hhcccCcccccccceeecCCCCeEeeeeecC-CC-CcEEEEecCC
Confidence 478999999999875433 23678888877 33 2222222222 2346888887766554432 22 2565555444
Q ss_pred CCcceeEecCCCCcc-cceEEEeCCE--EEEEEecCCeeEEEEEEc
Q 006375 255 TSETTVLIPHRESVK-LQDIQLFIDH--LAVYEREGGLQKITTYRL 297 (648)
Q Consensus 255 ~~~~~~~~~~~~~~~-~~~~~~~~~~--l~~~~~~~~~~~l~v~~~ 297 (648)
.......++...+.. +..+.|..+. +++........++.+|..
T Consensus 276 L~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~ 321 (1265)
T KOG1920|consen 276 LRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTT 321 (1265)
T ss_pred ccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEe
Confidence 222222344333333 6677776543 333222222334555543
No 398
>KOG4328 consensus WD40 protein [Function unknown]
Probab=91.24 E-value=19 Score=37.31 Aligned_cols=140 Identities=15% Similarity=0.128 Sum_probs=80.1
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-c---ccCccceeEEecCC-eEEEEEeCCCCCCceEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P---LVGVTASVEWAGNE-ALVYITMDEILRPDKAWL 155 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~---~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~ 155 (648)
..++++.+||-..--.|+.+.+| +|+..|++++..... . ..-.++.+.++.+. .+++... .....++-
T Consensus 235 ~~Vs~l~F~P~n~s~i~ssSyDG----tiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~---~G~f~~iD 307 (498)
T KOG4328|consen 235 GPVSGLKFSPANTSQIYSSSYDG----TIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDN---VGNFNVID 307 (498)
T ss_pred ccccceEecCCChhheeeeccCc----eeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeec---ccceEEEE
Confidence 35788999998887788888778 799999998753321 1 22235668888887 6655432 11333444
Q ss_pred EECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-cee-Ee--ee-cccceeeeEeecC
Q 006375 156 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELR-VL--TP-RVVGVDTAASHRG 230 (648)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~-~l--~~-~~~~~~~~~s~dg 230 (648)
+.++.++-..+.- ++. -..++++.|-..+++++++.+.+..|| |+..-. ... .| .+ +..-...++||.|
T Consensus 308 --~R~~~s~~~~~~l-h~k-KI~sv~~NP~~p~~laT~s~D~T~kIW--D~R~l~~K~sp~lst~~HrrsV~sAyFSPs~ 381 (498)
T KOG4328|consen 308 --LRTDGSEYENLRL-HKK-KITSVALNPVCPWFLATASLDQTAKIW--DLRQLRGKASPFLSTLPHRRSVNSAYFSPSG 381 (498)
T ss_pred --eecCCccchhhhh-hhc-ccceeecCCCCchheeecccCcceeee--ehhhhcCCCCcceecccccceeeeeEEcCCC
Confidence 4444332111111 111 233677889888888877665555555 543321 011 11 11 2222335699999
Q ss_pred CEE
Q 006375 231 NHF 233 (648)
Q Consensus 231 ~~l 233 (648)
..|
T Consensus 382 gtl 384 (498)
T KOG4328|consen 382 GTL 384 (498)
T ss_pred Cce
Confidence 984
No 399
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=91.13 E-value=6.4 Score=39.53 Aligned_cols=118 Identities=15% Similarity=0.090 Sum_probs=74.2
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecccc-CccceeEEecCCeEEEEEeCCCCCCceEEEEEC
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV-GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~-~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l 158 (648)
+-.+..+.|++ .-.+|+... ..+|.+||+.+|........ .....+.-+|...++..... ...+.+||.
T Consensus 260 t~~Vs~V~w~d--~~v~yS~Sw----DHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gss----dr~irl~DP 329 (423)
T KOG0313|consen 260 TEPVSSVVWSD--ATVIYSVSW----DHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSS----DRHIRLWDP 329 (423)
T ss_pred ccceeeEEEcC--CCceEeecc----cceEEEEEeecccceeeeecCcceeEeecccccceeeecCC----CCceeecCC
Confidence 44678899998 557888765 46999999999987643222 23556888887755554431 234677777
Q ss_pred CCCCCCcE-EEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 159 EADQSNDI-CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 159 ~~~~~~~~-~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
.++...-. .-|.. ...|.-.+.|+|-..+++++....+. +.++|+.+.+
T Consensus 330 R~~~gs~v~~s~~g-H~nwVssvkwsp~~~~~~~S~S~D~t--~klWDvRS~k 379 (423)
T KOG0313|consen 330 RTGDGSVVSQSLIG-HKNWVSSVKWSPTNEFQLVSGSYDNT--VKLWDVRSTK 379 (423)
T ss_pred CCCCCceeEEeeec-chhhhhheecCCCCceEEEEEecCCe--EEEEEeccCC
Confidence 76633211 11222 23466678999999999886554443 4455665543
No 400
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=91.04 E-value=9.8 Score=41.65 Aligned_cols=153 Identities=14% Similarity=0.092 Sum_probs=83.0
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCe-eeccc---cCccceeEEecCC-eEEEEEeCCCCCCceEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGKPL---VGVTASVEWAGNE-ALVYITMDEILRPDKAWL 155 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~-~~~~~---~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~ 155 (648)
+.-+.++||++|+.|+-.. | ..|-+.|+++++. .+... +.....+.-+||+ .+++.. +...+..
T Consensus 20 YtGG~~~~s~nG~~L~t~~---~---d~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~-----rs~llrv 88 (775)
T KOG0319|consen 20 YTGGPVAWSSNGQHLYTAC---G---DRVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTAS-----RSQLLRV 88 (775)
T ss_pred ecCCceeECCCCCEEEEec---C---ceEEEEEccCCceecccCCccchhhhheeeecCCccEEEEee-----ccceEEE
Confidence 4445689999999987664 3 3688899999988 33211 1224558889999 665432 2334556
Q ss_pred EECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeee--EeecCC-E
Q 006375 156 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA--ASHRGN-H 232 (648)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~--~s~dg~-~ 232 (648)
+.+.++.--+........|. +..+++|-| .++- ..+-...+-++|...+. .+--..+.++.... +.|+-. +
T Consensus 89 ~~L~tgk~irswKa~He~Pv--i~ma~~~~g-~LlA--tggaD~~v~VWdi~~~~-~th~fkG~gGvVssl~F~~~~~~~ 162 (775)
T KOG0319|consen 89 WSLPTGKLIRSWKAIHEAPV--ITMAFDPTG-TLLA--TGGADGRVKVWDIKNGY-CTHSFKGHGGVVSSLLFHPHWNRW 162 (775)
T ss_pred EEcccchHhHhHhhccCCCe--EEEEEcCCC-ceEE--eccccceEEEEEeeCCE-EEEEecCCCceEEEEEeCCccchh
Confidence 66766621111111112233 344677877 3332 22334667778887764 22222233343322 333322 2
Q ss_pred EEEEeccCCCCCcEEEEEeCCC
Q 006375 233 FFITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 233 l~~~~~~~~~~~~~l~~~~~~~ 254 (648)
+++. ++++..+.++++..
T Consensus 163 lL~s----g~~D~~v~vwnl~~ 180 (775)
T KOG0319|consen 163 LLAS----GATDGTVRVWNLND 180 (775)
T ss_pred heee----cCCCceEEEEEccc
Confidence 3333 23456788888864
No 401
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=90.87 E-value=1.5 Score=45.85 Aligned_cols=124 Identities=17% Similarity=0.202 Sum_probs=63.7
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEe--cCC-eEEEEEeCCCCCCceEEEEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWA--GNE-ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~Ws--pDg-~l~y~~~~~~~~~~~l~~~~ 157 (648)
.++..++|=|-++-+-...-..| +++++|.. +......+.|+ +++ .+............-|.++.
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~sG----nlyly~~~--------~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~ 287 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHASG----NLYLYDKE--------IVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWH 287 (636)
T ss_pred cceEEEEEEeCCCceEEEEEecC----ceEEeecc--------ccccCCCCcccccCCCCeeEEeeeeccccCCccceeE
Confidence 56777788776665544455556 57777761 11111123343 455 44333221111011123333
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeec-cccee-eeEeecCCEEE
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-VVGVD-TAASHRGNHFF 234 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~-~~~~~-~~~s~dg~~l~ 234 (648)
++.+ -...+.+||||++|+..+.+ .-|.++|.++.+ +.-+.+. ..+.. ..|||||++|+
T Consensus 288 ~~~g--------------~in~f~FS~DG~~LA~VSqD---GfLRvF~fdt~e-Llg~mkSYFGGLLCvcWSPDGKyIv 348 (636)
T KOG2394|consen 288 IGEG--------------SINEFAFSPDGKYLATVSQD---GFLRIFDFDTQE-LLGVMKSYFGGLLCVCWSPDGKYIV 348 (636)
T ss_pred eccc--------------cccceeEcCCCceEEEEecC---ceEEEeeccHHH-HHHHHHhhccceEEEEEcCCccEEE
Confidence 3222 12245789999999976543 346677776654 3333332 23333 35999999654
No 402
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=90.79 E-value=3.7 Score=43.64 Aligned_cols=171 Identities=13% Similarity=0.202 Sum_probs=77.5
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEecCCeEEEEEeCCCCCCceEEE-EECCCC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWL-HKLEAD 161 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~-~~l~~~ 161 (648)
...++.||+|+.++.. .+| .+.|+. +...+. ...+....++|++.+.++.... ...|-. .++...
T Consensus 35 p~~ls~npngr~v~V~--g~g--eY~iyt----~~~~r~-k~~G~g~~~vw~~~n~yAv~~~-----~~~I~I~kn~~~~ 100 (443)
T PF04053_consen 35 PQSLSHNPNGRFVLVC--GDG--EYEIYT----ALAWRN-KAFGSGLSFVWSSRNRYAVLES-----SSTIKIYKNFKNE 100 (443)
T ss_dssp -SEEEE-TTSSEEEEE--ETT--EEEEEE----TTTTEE-EEEEE-SEEEE-TSSEEEEE-T-----TS-EEEEETTEE-
T ss_pred CeeEEECCCCCEEEEE--cCC--EEEEEE----ccCCcc-cccCceeEEEEecCccEEEEEC-----CCeEEEEEcCccc
Confidence 5688999999999982 223 677765 111111 2233345699999777554322 233444 344322
Q ss_pred CCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc-eeeeEeecCCEEEEEeccC
Q 006375 162 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSD 240 (648)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~~~~ 240 (648)
.. ..+ ..+ +...--+. |..|.+.++ ..|.++|.++++.++.+. ... ....|+++|+.+++.+..
T Consensus 101 ~~--k~i-~~~---~~~~~If~--G~LL~~~~~----~~i~~yDw~~~~~i~~i~--v~~vk~V~Ws~~g~~val~t~~- 165 (443)
T PF04053_consen 101 VV--KSI-KLP---FSVEKIFG--GNLLGVKSS----DFICFYDWETGKLIRRID--VSAVKYVIWSDDGELVALVTKD- 165 (443)
T ss_dssp TT--------S---S-EEEEE---SSSEEEEET----TEEEEE-TTT--EEEEES--S-E-EEEEE-TTSSEEEEE-S--
T ss_pred cc--eEE-cCC---cccceEEc--CcEEEEECC----CCEEEEEhhHcceeeEEe--cCCCcEEEEECCCCEEEEEeCC-
Confidence 10 111 111 11110111 766665433 259999999876223332 122 245699999999998764
Q ss_pred CCCCcEEEEEeCC------CCCcc-ee-EecCCCCcccceEEEeCCEEEEEEecC
Q 006375 241 ELFNSELLACPVD------NTSET-TV-LIPHRESVKLQDIQLFIDHLAVYEREG 287 (648)
Q Consensus 241 ~~~~~~l~~~~~~------~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 287 (648)
..-|+..+.+ ..+.. .. ++.+ -...+.+..|.++ ++++...+
T Consensus 166 ---~i~il~~~~~~~~~~~~~g~e~~f~~~~E-~~~~IkSg~W~~d-~fiYtT~~ 215 (443)
T PF04053_consen 166 ---SIYILKYNLEAVAAIPEEGVEDAFELIHE-ISERIKSGCWVED-CFIYTTSN 215 (443)
T ss_dssp ---SEEEEEE-HHHHHHBTTTB-GGGEEEEEE-E-S--SEEEEETT-EEEEE-TT
T ss_pred ---eEEEEEecchhcccccccCchhceEEEEE-ecceeEEEEEEcC-EEEEEcCC
Confidence 2455555554 00111 11 3322 1335788899999 55555443
No 403
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=90.78 E-value=12 Score=41.30 Aligned_cols=198 Identities=10% Similarity=-0.018 Sum_probs=106.6
Q ss_pred CceEEEecccccCC-------CCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC--ccceeEEe
Q 006375 64 PEHLILDENVKAEG-------RGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWA 134 (648)
Q Consensus 64 ~~~~lld~n~~~~~-------~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~--~~~~~~Ws 134 (648)
+..++.|.|....+ .-.-++..+.|++-.-.|..+-..+| .|..||+...........+ ....+.|+
T Consensus 110 G~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg----~vK~~DlR~~~S~~t~~~nSESiRDV~fs 185 (839)
T KOG0269|consen 110 GVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDG----TVKCWDLRSKKSKSTFRSNSESIRDVKFS 185 (839)
T ss_pred CcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCc----eEEEEeeecccccccccccchhhhceeec
Confidence 45667787772211 11356678889888888877755444 8999999877665433222 23469999
Q ss_pred cCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC--c
Q 006375 135 GNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE--E 211 (648)
Q Consensus 135 pDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~--~ 211 (648)
|-- ..|++..+.+ -|..+||.-... -..-+..+ .+..+-..|+|++.||+-. . .+..+.++|..++. .
T Consensus 186 p~~~~~F~s~~dsG----~lqlWDlRqp~r-~~~k~~AH-~GpV~c~nwhPnr~~lATG-G--RDK~vkiWd~t~~~~~~ 256 (839)
T KOG0269|consen 186 PGYGNKFASIHDSG----YLQLWDLRQPDR-CEKKLTAH-NGPVLCLNWHPNREWLATG-G--RDKMVKIWDMTDSRAKP 256 (839)
T ss_pred cCCCceEEEecCCc----eEEEeeccCchh-HHHHhhcc-cCceEEEeecCCCceeeec-C--CCccEEEEeccCCCccc
Confidence 976 5555554432 255667765421 11222222 2334457899998888632 2 33456666666554 1
Q ss_pred eeEeeecccceeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeC
Q 006375 212 LRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI 277 (648)
Q Consensus 212 ~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (648)
...+..-..-....|=|+..+.+-++.- -....|.+.|+..|=.....+.+..+ .+.++.|..
T Consensus 257 ~~tInTiapv~rVkWRP~~~~hLAtcsm--v~dtsV~VWDvrRPYIP~~t~~eH~~-~vt~i~W~~ 319 (839)
T KOG0269|consen 257 KHTINTIAPVGRVKWRPARSYHLATCSM--VVDTSVHVWDVRRPYIPYATFLEHTD-SVTGIAWDS 319 (839)
T ss_pred eeEEeecceeeeeeeccCccchhhhhhc--cccceEEEEeeccccccceeeeccCc-cccceeccC
Confidence 1112111111223466665543333222 23467888888764222223333323 356677765
No 404
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=90.57 E-value=0.63 Score=43.41 Aligned_cols=86 Identities=15% Similarity=0.133 Sum_probs=55.0
Q ss_pred CCEEEEEccCCCCCCChh-hhhcccccCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhC----C--
Q 006375 435 GFIFAIAQIRGGGELGRQ-WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR----P-- 507 (648)
Q Consensus 435 G~~v~~~~~rG~g~~g~~-~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~----p-- 507 (648)
-..|.+|-||=..-...- -..........-.+.|+.+|.+|.+++.. +-..+.|+|||.|+.+...++.++ |
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~ 123 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEEIAGDPLR 123 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHHhcCchHH
Confidence 467888888843321110 00011111223578999999998877642 346899999999999999998874 2
Q ss_pred -CceeEEEecCCccc
Q 006375 508 -DLFKAAVAAVPFVD 521 (648)
Q Consensus 508 -~~~~a~v~~~~~~d 521 (648)
.+++|-+...++..
T Consensus 124 ~rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 124 KRLVAAYLIGYPVTV 138 (207)
T ss_pred hhhheeeecCccccH
Confidence 25666666666543
No 405
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=90.40 E-value=23 Score=36.25 Aligned_cols=118 Identities=15% Similarity=0.196 Sum_probs=61.1
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCe--eeccccC-------ccceeEEecC----C--eEEEEEeC--C
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP--VGKPLVG-------VTASVEWAGN----E--ALVYITMD--E 146 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~--~~~~~~~-------~~~~~~WspD----g--~l~y~~~~--~ 146 (648)
..++|.|||+. |..++.| .|++++. .|.. ....+.. -..++++.|+ + +++|+... .
T Consensus 5 ~~~a~~pdG~l--~v~e~~G----~i~~~~~-~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~ 77 (331)
T PF07995_consen 5 RSMAFLPDGRL--LVAERSG----RIWVVDK-DGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDG 77 (331)
T ss_dssp EEEEEETTSCE--EEEETTT----EEEEEET-TTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSS
T ss_pred eEEEEeCCCcE--EEEeCCc----eEEEEeC-CCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCC
Confidence 36789999975 4455567 7888883 3332 1111111 1345888885 4 44444331 1
Q ss_pred CCCCceEEEEECCCCC---CCcEEEEee-cC----CCeEEEEEeCCCCcEEEEEEcccc-----------ccEEEEEECC
Q 006375 147 ILRPDKAWLHKLEADQ---SNDICLYHE-KD----DIYSLGLQASESKKFLFIASESKI-----------TRFVFYLDVS 207 (648)
Q Consensus 147 ~~~~~~l~~~~l~~~~---~~~~~~~~~-~~----~~~~~~~~~s~Dg~~l~~~~~~~~-----------~~~l~~~dl~ 207 (648)
......|.++.+..+. ...+.++.. +. ......+.+.||| +|+++..+.. ...|.+++.+
T Consensus 78 ~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG-~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d 156 (331)
T PF07995_consen 78 GDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDG-KLYVSVGDGGNDDNAQDPNSLRGKILRIDPD 156 (331)
T ss_dssp SSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTS-EEEEEEB-TTTGGGGCSTTSSTTEEEEEETT
T ss_pred CCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCC-cEEEEeCCCCCcccccccccccceEEEeccc
Confidence 2233467777765441 112233322 21 2334467899999 7777654321 2478888876
Q ss_pred CC
Q 006375 208 KP 209 (648)
Q Consensus 208 ~~ 209 (648)
+.
T Consensus 157 G~ 158 (331)
T PF07995_consen 157 GS 158 (331)
T ss_dssp SS
T ss_pred Cc
Confidence 54
No 406
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=90.32 E-value=21 Score=41.63 Aligned_cols=121 Identities=12% Similarity=0.106 Sum_probs=69.8
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee--ccccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECCCC
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG--KPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 161 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~--~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~ 161 (648)
.+.|--||++.|.+.-....+.-.|.|+|-+ |..-. .+..+....++|-|.| .|+-....... . +|..+.-.+-
T Consensus 200 ~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd-~-~IvffErNGL 276 (1265)
T KOG1920|consen 200 SISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSD-S-DIVFFERNGL 276 (1265)
T ss_pred eEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCC-C-cEEEEecCCc
Confidence 4789999999998854444434678999887 43322 2334446679999998 66655443222 2 3444332221
Q ss_pred CC-CcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCC
Q 006375 162 QS-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 209 (648)
Q Consensus 162 ~~-~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~ 209 (648)
.- +-.+-+. .+..-...+.|..++.-|++.......+.|+++.+.+-
T Consensus 277 ~hg~f~l~~p-~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 277 RHGEFVLPFP-LDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred cccccccCCc-ccccchheeeecCCCCceeeeecccccceEEEEEecCe
Confidence 10 1111111 11111346789999988887666555566777766554
No 407
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=90.11 E-value=23 Score=35.80 Aligned_cols=153 Identities=8% Similarity=0.080 Sum_probs=83.9
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc--ccC---ccceeEEecCC-eEEEEEeCCCCCCceEEEEEC
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~--~~~---~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l 158 (648)
++.||| +.+..-..|.=...|+++...+|....+. +.+ ..-.++|||.. .+|++..-+ ..+.++++
T Consensus 216 ~LdWSp----~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~D----gsIrIWDi 287 (440)
T KOG0302|consen 216 GLDWSP----IKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCD----GSIRIWDI 287 (440)
T ss_pred eeeccc----ccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecC----ceEEEEEe
Confidence 567888 22222233554668999999988766432 211 13359999998 777766422 23666777
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC---ceeEeeecccce-eeeEeecCCEEE
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---ELRVLTPRVVGV-DTAASHRGNHFF 234 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~---~~~~l~~~~~~~-~~~~s~dg~~l~ 234 (648)
..++.+..+.. .....-.--++|+.+-..|+. ..+...+-++||..-+ ++..+.-....+ ...|.|....++
T Consensus 288 Rs~~~~~~~~~-kAh~sDVNVISWnr~~~lLas---G~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~i 363 (440)
T KOG0302|consen 288 RSGPKKAAVST-KAHNSDVNVISWNRREPLLAS---GGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVI 363 (440)
T ss_pred cCCCccceeEe-eccCCceeeEEccCCcceeee---cCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceE
Confidence 77654444333 332222334678877663332 2233456667776543 122222222222 245888777766
Q ss_pred EEeccCCCCCcEEEEEeCC
Q 006375 235 ITRRSDELFNSELLACPVD 253 (648)
Q Consensus 235 ~~~~~~~~~~~~l~~~~~~ 253 (648)
.++..+ -+|...|++
T Consensus 364 aasg~D----~QitiWDls 378 (440)
T KOG0302|consen 364 AASGED----NQITIWDLS 378 (440)
T ss_pred EeccCC----CcEEEEEee
Confidence 665542 256666653
No 408
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=90.04 E-value=4.3 Score=44.53 Aligned_cols=117 Identities=12% Similarity=0.108 Sum_probs=75.1
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee--ecc-ccCccceeEEecCC-eEEEEEeCCCCCCceEEEEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV--GKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~--~~~-~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~ 157 (648)
++..++|||--...-++...+| .|.+||+.-...- ..+ -.+....+.|+|++ +|+- . +|...+.+++
T Consensus 178 SiRDV~fsp~~~~~F~s~~dsG----~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lAT-G----GRDK~vkiWd 248 (839)
T KOG0269|consen 178 SIRDVKFSPGYGNKFASIHDSG----YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLAT-G----GRDKMVKIWD 248 (839)
T ss_pred hhhceeeccCCCceEEEecCCc----eEEEeeccCchhHHHHhhcccCceEEEeecCCCceeee-c----CCCccEEEEe
Confidence 5677888886554445555556 7888898653321 111 23445568899988 6643 2 3445577777
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCC
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 209 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~ 209 (648)
.+++....+.......+ ..-+.|-|+.++.+.++.-.....|+++|+..+
T Consensus 249 ~t~~~~~~~~tInTiap--v~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRP 298 (839)
T KOG0269|consen 249 MTDSRAKPKHTINTIAP--VGRVKWRPARSYHLATCSMVVDTSVHVWDVRRP 298 (839)
T ss_pred ccCCCccceeEEeecce--eeeeeeccCccchhhhhhccccceEEEEeeccc
Confidence 87765444443333212 235789999998887777777889999998765
No 409
>PRK13614 lipoprotein LpqB; Provisional
Probab=89.91 E-value=14 Score=40.63 Aligned_cols=162 Identities=13% Similarity=-0.011 Sum_probs=85.9
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC-ccceeEEecCCeEEEEEeCCCCCCceEEEEECC
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNEALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~-~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
..+..+.+|+||+.+|+... . ...+++.... +.... ...+ ....++|.++|+++-. .+ +.+.+|.+..-.
T Consensus 343 ~~~~s~avS~~g~~~A~~~~---~-~~~l~~~~~g-~~~~~-~~~g~~Lt~PS~d~~g~vWtv-~~--g~~~~vv~~~~~ 413 (573)
T PRK13614 343 LGPASPAESPVSQTVAFLNG---S-RTTLYTVSPG-QPARA-LTSGSTLTRPSFSPQDWVWTA-GP--GGNGRIVAYRPT 413 (573)
T ss_pred ccccceeecCCCceEEEecC---C-CcEEEEecCC-Cccee-eecCCCccCCcccCCCCEEEe-eC--CCCceEEEEecC
Confidence 45678899999999999732 2 3477776652 32222 2222 2455889888855533 22 222345554422
Q ss_pred -CCCCC--c--EEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEEC---CCCCceeEeeec-c-----cceeee
Q 006375 160 -ADQSN--D--ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV---SKPEELRVLTPR-V-----VGVDTA 225 (648)
Q Consensus 160 -~~~~~--~--~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl---~~~~~~~~l~~~-~-----~~~~~~ 225 (648)
++... . .......+..-...+..|+||-++++.....+...|++.-+ ..+. ++.|+.. . ......
T Consensus 414 g~~~~~~~~~~~v~~~~l~g~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~G~-P~~L~~~~~~~~~~~~~sl~ 492 (573)
T PRK13614 414 GVAEGAQAPTVTLTADWLAGRTVKELRVSREGVRALVISEQNGKSRVQVAGIVRNEDGT-PRELTAPITLAADSDADTGA 492 (573)
T ss_pred CCcccccccceeecccccCCCeeEEEEECCCccEEEEEEEeCCccEEEEEEEEeCCCCC-eEEccCceecccCCCcceeE
Confidence 11100 0 11111111222557899999999888776555556776433 2333 3444321 1 123345
Q ss_pred EeecCCEEEEEeccCCCCCcEEEEEeCCC
Q 006375 226 ASHRGNHFFITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 226 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 254 (648)
|..++. |+..+... ..+..++++.+..
T Consensus 493 W~~~~s-l~V~~~~~-~~~~~~~~v~v~~ 519 (573)
T PRK13614 493 WVGDST-VVVTKASA-TSNVVPELLSVDA 519 (573)
T ss_pred EcCCCE-EEEEeccC-CCcceEEEEEeCC
Confidence 776665 66665432 3455667777743
No 410
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=89.73 E-value=5.9 Score=31.50 Aligned_cols=72 Identities=7% Similarity=0.065 Sum_probs=42.5
Q ss_pred eEEecC-CeEEEEEeCC-------------CCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccc
Q 006375 131 VEWAGN-EALVYITMDE-------------ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK 196 (648)
Q Consensus 131 ~~WspD-g~l~y~~~~~-------------~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~ 196 (648)
+.-.+| |.|||+-... .....+|++++..++ +-.++.+. -.+.-+++.|+|++++++.- .
T Consensus 3 ldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~--~~~vl~~~--L~fpNGVals~d~~~vlv~E--t 76 (89)
T PF03088_consen 3 LDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTK--ETTVLLDG--LYFPNGVALSPDESFVLVAE--T 76 (89)
T ss_dssp EEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTT--EEEEEEEE--ESSEEEEEE-TTSSEEEEEE--G
T ss_pred eeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCC--eEEEehhC--CCccCeEEEcCCCCEEEEEe--c
Confidence 556677 4777765421 123467999999887 33344433 24666899999999998743 3
Q ss_pred cccEEEEEECCC
Q 006375 197 ITRFVFYLDVSK 208 (648)
Q Consensus 197 ~~~~l~~~dl~~ 208 (648)
...+|..+-+++
T Consensus 77 ~~~Ri~rywl~G 88 (89)
T PF03088_consen 77 GRYRILRYWLKG 88 (89)
T ss_dssp GGTEEEEEESSS
T ss_pred cCceEEEEEEeC
Confidence 446676666654
No 411
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=89.71 E-value=17 Score=39.43 Aligned_cols=53 Identities=19% Similarity=0.254 Sum_probs=39.6
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecc--ccCccceeEEecCC-eEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNE-ALV 140 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~--~~~~~~~~~WspDg-~l~ 140 (648)
.+..+.+-|||..|..+. | ..++++|+..|..+..- -.+....++||.|| .++
T Consensus 14 ci~d~afkPDGsqL~lAA---g---~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFA 69 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA---G---SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFA 69 (1081)
T ss_pred chheeEECCCCceEEEec---C---CEEEEEeCCCcccccccccccceEEEEEEccCCceec
Confidence 667889999999998875 3 38999999988876421 12334569999999 554
No 412
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=89.61 E-value=0.5 Score=42.21 Aligned_cols=39 Identities=18% Similarity=0.162 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCC
Q 006375 467 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP 507 (648)
Q Consensus 467 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p 507 (648)
..+...++....+ ....+|.++|||+||.+|..++.+..
T Consensus 12 ~~i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 12 NLVLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred HHHHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 3444444444332 24579999999999999988777653
No 413
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=89.43 E-value=4.6 Score=39.13 Aligned_cols=138 Identities=16% Similarity=0.144 Sum_probs=76.7
Q ss_pred CCCceEEEecccccCCCCc---EEEeeEEeCCC---CCEEEEEEeCCCCeEEEEEEEECCCCCeeec---cccCccceeE
Q 006375 62 APPEHLILDENVKAEGRGF---YSVGCFQVSPD---NKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVGVTASVE 132 (648)
Q Consensus 62 ~~~~~~lld~n~~~~~~~~---~~~~~~~~SPD---G~~la~~~~~~G~e~~~l~v~dl~~g~~~~~---~~~~~~~~~~ 132 (648)
.+...-+.|.|++.+...+ -.+..-.|||= .-+||... ...+|++.|+++|.-... .-.++ ..+.
T Consensus 122 FDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gt-----r~~~VrLCDi~SGs~sH~LsGHr~~v-laV~ 195 (397)
T KOG4283|consen 122 FDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGT-----RDVQVRLCDIASGSFSHTLSGHRDGV-LAVE 195 (397)
T ss_pred ccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEec-----CCCcEEEEeccCCcceeeeccccCce-EEEE
Confidence 3455677999998753221 12344567773 34455433 246899999999985432 12233 4599
Q ss_pred EecCC-eEEEEEeCCCCCCceEEEEECCCC--------CCCcEEEEeec--CCCeEEEEEeCCCCcEEEEEEccccccEE
Q 006375 133 WAGNE-ALVYITMDEILRPDKAWLHKLEAD--------QSNDICLYHEK--DDIYSLGLQASESKKFLFIASESKITRFV 201 (648)
Q Consensus 133 WspDg-~l~y~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~~--~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l 201 (648)
|+|.. +++++..-+ ...++|-++-.++ +.+...+.+.. ...-+.+.+|+.||++++. ....+++
T Consensus 196 Wsp~~e~vLatgsaD--g~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~---~gtd~r~ 270 (397)
T KOG4283|consen 196 WSPSSEWVLATGSAD--GAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLAS---CGTDDRI 270 (397)
T ss_pred eccCceeEEEecCCC--ceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhh---ccCccce
Confidence 99999 999987532 2223332221111 10111111111 1122457899999999863 3344566
Q ss_pred EEEECCCCC
Q 006375 202 FYLDVSKPE 210 (648)
Q Consensus 202 ~~~dl~~~~ 210 (648)
.+++...+.
T Consensus 271 r~wn~~~G~ 279 (397)
T KOG4283|consen 271 RVWNMESGR 279 (397)
T ss_pred EEeecccCc
Confidence 666666665
No 414
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=89.33 E-value=7.2 Score=40.52 Aligned_cols=128 Identities=14% Similarity=0.160 Sum_probs=58.5
Q ss_pred EEEEEEECCCCCeeec-ccc--C-ccceeEEe--cCCeEEEEEeCCCCCCceEEEEEC-CCCCCCcEEEEeecC------
Q 006375 107 YTVYVIDIETGTPVGK-PLV--G-VTASVEWA--GNEALVYITMDEILRPDKAWLHKL-EADQSNDICLYHEKD------ 173 (648)
Q Consensus 107 ~~l~v~dl~~g~~~~~-~~~--~-~~~~~~Ws--pDg~l~y~~~~~~~~~~~l~~~~l-~~~~~~~~~~~~~~~------ 173 (648)
.+|.|||+.+.+.++. .+. + .-..+.|. |+..--|+... -...||++-- ..+.=+.+.+.+-+.
T Consensus 222 ~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~a---Lss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~ 298 (461)
T PF05694_consen 222 HSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCA---LSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGW 298 (461)
T ss_dssp -EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE-----EEEEEEEE-ETTEEEEEEEEEE--EE--SS
T ss_pred CeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEe---ccceEEEEEEcCCCCeeeeEEEECCCcccCcc
Confidence 5899999999887753 222 2 22335554 55533344431 2334554322 222111112222111
Q ss_pred ------------CCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeee-ccc------------------c-
Q 006375 174 ------------DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVV------------------G- 221 (648)
Q Consensus 174 ------------~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~-~~~------------------~- 221 (648)
+....++..|.|.|+|+++.- ...+|..+|++++..++++-. ... +
T Consensus 299 ~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W--~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgP 376 (461)
T PF05694_consen 299 ILPEMLKPFGAVPPLITDILISLDDRFLYVSNW--LHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGP 376 (461)
T ss_dssp ---GGGGGG-EE------EEE-TTS-EEEEEET--TTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S--
T ss_pred cccccccccccCCCceEeEEEccCCCEEEEEcc--cCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCC
Confidence 234567889999999998543 456888999988763333221 000 1
Q ss_pred eeeeEeecCCEEEEEecc
Q 006375 222 VDTAASHRGNHFFITRRS 239 (648)
Q Consensus 222 ~~~~~s~dg~~l~~~~~~ 239 (648)
.-.++|-||++||+++..
T Consensus 377 qMvqlS~DGkRlYvTnSL 394 (461)
T PF05694_consen 377 QMVQLSLDGKRLYVTNSL 394 (461)
T ss_dssp --EEE-TTSSEEEEE---
T ss_pred CeEEEccCCeEEEEEeec
Confidence 124589999999988753
No 415
>PRK02888 nitrous-oxide reductase; Validated
Probab=89.28 E-value=19 Score=39.58 Aligned_cols=109 Identities=12% Similarity=0.075 Sum_probs=59.6
Q ss_pred EEEeCCCCcEEEEEEc-cccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEEeccCCCCCcEEEEEeCCC---
Q 006375 179 GLQASESKKFLFIASE-SKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDN--- 254 (648)
Q Consensus 179 ~~~~s~Dg~~l~~~~~-~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~--- 254 (648)
.+.+++||+++++++. +.....+..++..... ..... +....+ .+.++|+..++ + ..++.++|..+
T Consensus 239 ~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d-~~vvf-ni~~ie-a~vkdGK~~~V--~-----gn~V~VID~~t~~~ 308 (635)
T PRK02888 239 NVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERD-WVVVF-NIARIE-EAVKAGKFKTI--G-----GSKVPVVDGRKAAN 308 (635)
T ss_pred cceECCCCCEEEEeccCcccCcceeeeccccCc-eEEEE-chHHHH-HhhhCCCEEEE--C-----CCEEEEEECCcccc
Confidence 4578999999998863 2334556666654433 22111 111111 24567886665 1 13688888765
Q ss_pred -CCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 006375 255 -TSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 299 (648)
Q Consensus 255 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~ 299 (648)
.......++.... ..++..++|+-+++......+.+.|+++..
T Consensus 309 ~~~~v~~yIPVGKs--PHGV~vSPDGkylyVanklS~tVSVIDv~k 352 (635)
T PRK02888 309 AGSALTRYVPVPKN--PHGVNTSPDGKYFIANGKLSPTVTVIDVRK 352 (635)
T ss_pred CCcceEEEEECCCC--ccceEECCCCCEEEEeCCCCCcEEEEEChh
Confidence 1112224444332 445555555555555555567888888863
No 416
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=89.02 E-value=8.2 Score=40.61 Aligned_cols=86 Identities=10% Similarity=0.018 Sum_probs=52.4
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecccc-CccceeEEecCCeEEEEEeCCCCCCceEEEEECCCCC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV-GVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 162 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~-~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~ 162 (648)
-...|||....|+ .|+|.....|||-.+......... -...+++|.|| .+|.... |+.
T Consensus 190 L~~~W~~~s~lI~-----sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva~npd-~~~~v~S-----------~nt---- 248 (737)
T KOG1524|consen 190 LSLSWSTQSNIIA-----SGGEDFRFKIWDAQGANLFTSAAEEYAITSVAFNPE-KDYLLWS-----------YNT---- 248 (737)
T ss_pred EEeecCcccccee-----ecCCceeEEeecccCcccccCChhccceeeeeeccc-cceeeee-----------eee----
Confidence 3567888887776 467789999999765433322222 23567999999 4443322 110
Q ss_pred CCcEEEEeecCCCeEEEEEeCCCCcEEEEEEc
Q 006375 163 SNDICLYHEKDDIYSLGLQASESKKFLFIASE 194 (648)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~ 194 (648)
+-++.+..+..+.++||+||..+.....
T Consensus 249 ----~R~~~p~~GSifnlsWS~DGTQ~a~gt~ 276 (737)
T KOG1524|consen 249 ----ARFSSPRVGSIFNLSWSADGTQATCGTS 276 (737)
T ss_pred ----eeecCCCccceEEEEEcCCCceeecccc
Confidence 1133333344557899999999876543
No 417
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=88.98 E-value=6.3 Score=31.32 Aligned_cols=53 Identities=17% Similarity=0.083 Sum_probs=36.1
Q ss_pred cccEEEEEECCCCCceeEeeecccc-eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCC
Q 006375 197 ITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 197 ~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 254 (648)
.+.+|+.+|..+++ .+.+..+... .-..+++|++.|++.-.. ..+|.++-+++
T Consensus 35 ~~GRll~ydp~t~~-~~vl~~~L~fpNGVals~d~~~vlv~Et~----~~Ri~rywl~G 88 (89)
T PF03088_consen 35 PTGRLLRYDPSTKE-TTVLLDGLYFPNGVALSPDESFVLVAETG----RYRILRYWLKG 88 (89)
T ss_dssp --EEEEEEETTTTE-EEEEEEEESSEEEEEE-TTSSEEEEEEGG----GTEEEEEESSS
T ss_pred CCcCEEEEECCCCe-EEEehhCCCccCeEEEcCCCCEEEEEecc----CceEEEEEEeC
Confidence 34689999999987 6666655432 224589999988777553 36888887765
No 418
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=88.74 E-value=11 Score=35.55 Aligned_cols=121 Identities=13% Similarity=0.115 Sum_probs=62.3
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCe----EEEEEEEECCCCCeeeccccCccceeEEecCC-eEEEEEeCCCCCCceE--E
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDE----IYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKA--W 154 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e----~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l--~ 154 (648)
++..-.++||||+.+=++...|.+ ...||.+-+...-.+...--++..+++|+-|- .+||+-. -++.| |
T Consensus 110 R~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDs----ln~~V~a~ 185 (310)
T KOG4499|consen 110 RLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQVELIWNCVGISNGLAWDSDAKKFYYIDS----LNYEVDAY 185 (310)
T ss_pred ccccCccCCCCceeeeeeccccccccccccEEEEeccCCCceeeehhccCCccccccccCcEEEEEcc----CceEEeee
Confidence 444557899999966555544421 12455554433222211122345569999888 7766532 23455 6
Q ss_pred EEECCCCCC-CcEEEEeecCCCeEEEEEeCCCCcE------EEEEEccccccEEEEEECCCCC
Q 006375 155 LHKLEADQS-NDICLYHEKDDIYSLGLQASESKKF------LFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 155 ~~~l~~~~~-~~~~~~~~~~~~~~~~~~~s~Dg~~------l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
-++..+++. ....+|.-...+-+ -..-|||-- |++.. -....++.+|..+++
T Consensus 186 dyd~~tG~~snr~~i~dlrk~~~~--e~~~PDGm~ID~eG~L~Va~--~ng~~V~~~dp~tGK 244 (310)
T KOG4499|consen 186 DYDCPTGDLSNRKVIFDLRKSQPF--ESLEPDGMTIDTEGNLYVAT--FNGGTVQKVDPTTGK 244 (310)
T ss_pred ecCCCcccccCcceeEEeccCCCc--CCCCCCcceEccCCcEEEEE--ecCcEEEEECCCCCc
Confidence 666777643 33445432211100 012344421 22222 234678888988887
No 419
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=88.66 E-value=3.4 Score=44.89 Aligned_cols=134 Identities=10% Similarity=0.111 Sum_probs=74.0
Q ss_pred CCceEEEecccccCCC----CcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCc--cceeEEecC
Q 006375 63 PPEHLILDENVKAEGR----GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV--TASVEWAGN 136 (648)
Q Consensus 63 ~~~~~lld~n~~~~~~----~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~--~~~~~WspD 136 (648)
|-..||+|+..-...| ..-.+..++|||+|||+|-..- | ....+.||+++....+....+.. ...++|+|-
T Consensus 57 GCvVVlfn~~~~tQ~hlvnssRk~~t~vAfS~~GryvatGEc--G-~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp~ 133 (1080)
T KOG1408|consen 57 GCVVVLFNVDSCTQSHLVNSSRKPLTCVAFSQNGRYVATGEC--G-RTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSPG 133 (1080)
T ss_pred CcEEEEEcccccchhheecccCcceeEEEEcCCCcEEEeccc--C-CCccceeeeeccccchhhhhhccccceeeeecCC
Confidence 4567888886643321 1236788999999999986543 2 24578999999877654333332 345889999
Q ss_pred C-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCC
Q 006375 137 E-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 208 (648)
Q Consensus 137 g-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~ 208 (648)
+ ++.-+...-.. --.+|.++.....+ ...+ ..-...+++|.||.|.+-..+++ -.+|.++...
T Consensus 134 ~kyvvSVGsQHDM-IVnv~dWr~N~~~a-snki-----ss~Vsav~fsEdgSYfvT~gnrH--vk~wyl~~~~ 197 (1080)
T KOG1408|consen 134 NKYVVSVGSQHDM-IVNVNDWRVNSSGA-SNKI-----SSVVSAVAFSEDGSYFVTSGNRH--VKLWYLQIQS 197 (1080)
T ss_pred CcEEEeeccccce-EEEhhhhhhccccc-cccc-----ceeEEEEEEccCCceeeeeeeee--EEEEEeeccc
Confidence 9 66544332110 11122222211111 1111 11223467899999876443322 3455555443
No 420
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=88.47 E-value=6.8 Score=41.76 Aligned_cols=114 Identities=11% Similarity=0.116 Sum_probs=74.0
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee-ec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEEC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-GK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~-~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l 158 (648)
.+..+.|.-+|+|||-....+| ...|.|..|.-+... +. ...+....+.|.|-. +++..+.. .|..++|
T Consensus 523 ~i~~vtWHrkGDYlatV~~~~~--~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~------~vRiYdL 594 (733)
T KOG0650|consen 523 SIRQVTWHRKGDYLATVMPDSG--NKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQR------SVRIYDL 594 (733)
T ss_pred ccceeeeecCCceEEEeccCCC--cceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEecc------ceEEEeh
Confidence 4678899999999999887666 567888888655433 11 223444558899998 77766542 3777887
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCC
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 209 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~ 209 (648)
.......+ +. ....|....+.+|.|..|++.+.. +.+..+|++-.
T Consensus 595 ~kqelvKk-L~--tg~kwiS~msihp~GDnli~gs~d---~k~~WfDldls 639 (733)
T KOG0650|consen 595 SKQELVKK-LL--TGSKWISSMSIHPNGDNLILGSYD---KKMCWFDLDLS 639 (733)
T ss_pred hHHHHHHH-Hh--cCCeeeeeeeecCCCCeEEEecCC---CeeEEEEcccC
Confidence 65311111 11 123455567889999999876543 45666776654
No 421
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=88.46 E-value=1.4 Score=46.27 Aligned_cols=119 Identities=13% Similarity=0.111 Sum_probs=66.2
Q ss_pred CCCCcEEEEecCCCCCCCCCCCc-------------h----hHHHHHHCCCEEEEEccCCCCCCChhhhhcccccCCCCc
Q 006375 403 DGSDPLLLYGYGSYEICNDPAFN-------------S----SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNT 465 (648)
Q Consensus 403 ~~~~P~vl~~hGg~~~~~~~~~~-------------~----~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~ 465 (648)
..+.|+|+++-||+|.+....+. + .--.|.+. -.++.+|.+-+.||.+.- ...........
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~-~~e~~~d~~~~ 175 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRAL-GDEKKKDFEGA 175 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCccccc-ccccccchhcc
Confidence 35689999999998765433221 1 11245544 457778877666666541 11111222234
Q ss_pred HhHHHHHHHHHHHc---CCCCCCeEEEEeeChhHH----HHHHHHhh--CCC---ceeEEEecCC-ccccc
Q 006375 466 FTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGL----LIGAVLNM--RPD---LFKAAVAAVP-FVDVL 523 (648)
Q Consensus 466 ~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~----l~~~~~~~--~p~---~~~a~v~~~~-~~d~~ 523 (648)
-+|+....+.+.+. ..-.-.+..|+|.|+||. +|..+..+ .+. ++..+...++ .+|.+
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng~~t~Pl 246 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNGLWTDPL 246 (498)
T ss_pred chhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCCcccChh
Confidence 46777766655443 111225899999999998 34444443 122 3445555555 44443
No 422
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=88.31 E-value=26 Score=36.43 Aligned_cols=100 Identities=13% Similarity=0.124 Sum_probs=53.0
Q ss_pred ceeEEecCCeEEEEEeCCCCCCceEEEE-ECCCCCC---CcEEEEeecCC------CeEEEEEeCCCCcEEEEEEccc--
Q 006375 129 ASVEWAGNEALVYITMDEILRPDKAWLH-KLEADQS---NDICLYHEKDD------IYSLGLQASESKKFLFIASESK-- 196 (648)
Q Consensus 129 ~~~~WspDg~l~y~~~~~~~~~~~l~~~-~l~~~~~---~~~~~~~~~~~------~~~~~~~~s~Dg~~l~~~~~~~-- 196 (648)
.+++|.++| +|++. ..+|+++ +.+.+.. +.+++++.-.. ....++.+.|||+ |+++..+.
T Consensus 75 ~Gi~~~~~G-lyV~~------~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~-LYv~~G~~~~ 146 (367)
T TIGR02604 75 TGLAVAVGG-VYVAT------PPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGW-LYFNHGNTLA 146 (367)
T ss_pred cceeEecCC-EEEeC------CCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCC-EEEecccCCC
Confidence 458898998 55432 1247766 3332211 22334432111 2233678999995 55543321
Q ss_pred ---------------cccEEEEEECCCCCceeEeeecccc-eeeeEeecCCEEEEEec
Q 006375 197 ---------------ITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRR 238 (648)
Q Consensus 197 ---------------~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~~ 238 (648)
....+++++.++++ .+.+.....+ ....|+++|+ ++++.+
T Consensus 147 ~~~~~~~~~~~~~~~~~g~i~r~~pdg~~-~e~~a~G~rnp~Gl~~d~~G~-l~~tdn 202 (367)
T TIGR02604 147 SKVTRPGTSDESRQGLGGGLFRYNPDGGK-LRVVAHGFQNPYGHSVDSWGD-VFFCDN 202 (367)
T ss_pred ceeccCCCccCcccccCceEEEEecCCCe-EEEEecCcCCCccceECCCCC-EEEEcc
Confidence 01368888888876 5555543322 2245778775 555544
No 423
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=88.23 E-value=36 Score=35.56 Aligned_cols=131 Identities=12% Similarity=-0.004 Sum_probs=79.6
Q ss_pred CceEEEeccccc----CCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc---cCccceeEEecC
Q 006375 64 PEHLILDENVKA----EGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL---VGVTASVEWAGN 136 (648)
Q Consensus 64 ~~~~lld~n~~~----~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~---~~~~~~~~WspD 136 (648)
+..-+||.++.. -..-...+....++|+++.++.+.+. ...+.+||+.++.. ...+ .+.....+|+|-
T Consensus 90 G~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sD----d~v~k~~d~s~a~v-~~~l~~htDYVR~g~~~~~ 164 (487)
T KOG0310|consen 90 GHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSD----DKVVKYWDLSTAYV-QAELSGHTDYVRCGDISPA 164 (487)
T ss_pred CcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCC----CceEEEEEcCCcEE-EEEecCCcceeEeeccccC
Confidence 445678876621 11124566778999999988876543 34788888888775 3233 233456889998
Q ss_pred C-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 137 E-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 137 g-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
. .+++++ .....|..|++.+.. ....-+... .-.-.+-.-|.|..|+-. +.+.+-++|+.+|.
T Consensus 165 ~~hivvtG----sYDg~vrl~DtR~~~-~~v~elnhg--~pVe~vl~lpsgs~iasA----gGn~vkVWDl~~G~ 228 (487)
T KOG0310|consen 165 NDHIVVTG----SYDGKVRLWDTRSLT-SRVVELNHG--CPVESVLALPSGSLIASA----GGNSVKVWDLTTGG 228 (487)
T ss_pred CCeEEEec----CCCceEEEEEeccCC-ceeEEecCC--CceeeEEEcCCCCEEEEc----CCCeEEEEEecCCc
Confidence 8 888875 334457788877652 222222221 112234456777665422 35778899998664
No 424
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=88.03 E-value=37 Score=35.50 Aligned_cols=245 Identities=13% Similarity=0.078 Sum_probs=128.7
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-ccc-CccceeEEecCC-eEEEEEeCCCCCCceEEEEECCC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV-GVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~-~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
......|+|..+.++..... ++.+.+......... ... ..-.+.+-++++ .+|....+ ...+..++..+
T Consensus 34 ~~v~~~~~g~~~~v~~~~~~----~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~----~~~v~vid~~~ 105 (381)
T COG3391 34 GGVAVNPDGTQVYVANSGSN----DVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGD----SNTVSVIDTAT 105 (381)
T ss_pred ceeEEcCccCEEEEEeecCc----eeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCC----CCeEEEEcCcc
Confidence 35678999988777765332 566666553222221 112 123457778888 66554432 23466666444
Q ss_pred CCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeE-eeecccceeeeEeecCCEEEEEecc
Q 006375 161 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-LTPRVVGVDTAASHRGNHFFITRRS 239 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~-l~~~~~~~~~~~s~dg~~l~~~~~~ 239 (648)
. +.+....-...-.++.+++|++++++.......+.++++|..+.+ ... +..........++|+|..+|....
T Consensus 106 ~----~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~-~~~~~~vG~~P~~~a~~p~g~~vyv~~~- 179 (381)
T COG3391 106 N----TVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNK-VTATIPVGNTPTGVAVDPDGNKVYVTNS- 179 (381)
T ss_pred c----ceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCe-EEEEEecCCCcceEEECCCCCeEEEEec-
Confidence 3 111111111233467899999999886443357889999998876 222 222222234558999998776652
Q ss_pred CCCCCcEEEEEeCCCCCccee----EecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeec
Q 006375 240 DELFNSELLACPVDNTSETTV----LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEF 315 (648)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~ 315 (648)
....|..++.+.....+. .+..........+..++.++++....+....+..++... .... ....
T Consensus 180 ---~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~--~~v~------~~~~ 248 (381)
T COG3391 180 ---DDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTAT--GNVT------ATDL 248 (381)
T ss_pred ---CCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCC--ceEE------Eecc
Confidence 235788888654211100 122222212233444556666665554334566666552 2211 1101
Q ss_pred CCCeeeeeCCCCcccccEEEEEEeeCCCCCEEEEEECCCCc
Q 006375 316 IDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 356 (648)
Q Consensus 316 ~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 356 (648)
+.....-.+...++++..+++..+. ...++..|..+.+
T Consensus 249 ~~~~~~~~~v~~~p~g~~~yv~~~~---~~~V~vid~~~~~ 286 (381)
T COG3391 249 PVGSGAPRGVAVDPAGKAAYVANSQ---GGTVSVIDGATDR 286 (381)
T ss_pred ccccCCCCceeECCCCCEEEEEecC---CCeEEEEeCCCCc
Confidence 1111001124456777755444333 7788888888776
No 425
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=87.94 E-value=2.5 Score=41.41 Aligned_cols=47 Identities=19% Similarity=0.159 Sum_probs=28.4
Q ss_pred HHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCCC-ceeEEEecC
Q 006375 470 IACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-LFKAAVAAV 517 (648)
Q Consensus 470 ~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-~~~a~v~~~ 517 (648)
..+.+-|....... +-+-++|+|.||.+.=+++.+.|+ .++-.|...
T Consensus 66 ~~vc~~l~~~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlg 113 (279)
T PF02089_consen 66 EQVCEQLANDPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLG 113 (279)
T ss_dssp HHHHHHHHH-GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES
T ss_pred HHHHHHHhhChhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEec
Confidence 33444444433222 579999999999988788877654 466666543
No 426
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=87.90 E-value=33 Score=34.74 Aligned_cols=190 Identities=17% Similarity=0.126 Sum_probs=106.1
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCe-----------------------ee-ccccC---ccceeEE
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-----------------------VG-KPLVG---VTASVEW 133 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~-----------------------~~-~~~~~---~~~~~~W 133 (648)
-.+..++..+||.+++= |+-...|.+|+.++.+. .+ .++.+ ....+.|
T Consensus 194 ~~V~sVsv~~sgtr~~S-----gS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w 268 (423)
T KOG0313|consen 194 RSVDSVSVDSSGTRFCS-----GSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVW 268 (423)
T ss_pred cceeEEEecCCCCeEEe-----ecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEE
Confidence 46678888999998763 33346788887322110 01 12222 2566999
Q ss_pred ecCCeEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC---
Q 006375 134 AGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE--- 210 (648)
Q Consensus 134 spDg~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~--- 210 (648)
++ ...+|+..- .+.|..+|+.+++..+. +.. ..-+..+..+|..+.|+..+ ....|.++|..++.
T Consensus 269 ~d-~~v~yS~Sw----DHTIk~WDletg~~~~~-~~~---~ksl~~i~~~~~~~Ll~~gs---sdr~irl~DPR~~~gs~ 336 (423)
T KOG0313|consen 269 SD-ATVIYSVSW----DHTIKVWDLETGGLKST-LTT---NKSLNCISYSPLSKLLASGS---SDRHIRLWDPRTGDGSV 336 (423)
T ss_pred cC-CCceEeecc----cceEEEEEeecccceee-eec---CcceeEeecccccceeeecC---CCCceeecCCCCCCCce
Confidence 87 544455432 24488888888743332 221 23344677888776665322 34678888888776
Q ss_pred ceeEeeeccccee-eeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCccee-EecCCCCcccceEEEeCCEEEEEEecCC
Q 006375 211 ELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFIDHLAVYEREGG 288 (648)
Q Consensus 211 ~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 288 (648)
....+......+. ..|+|-..+.+.....+ ..+...|+......-. +..+ +..+..+.|.....++....+
T Consensus 337 v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D----~t~klWDvRS~k~plydI~~h--~DKvl~vdW~~~~~IvSGGaD- 409 (423)
T KOG0313|consen 337 VSQSLIGHKNWVSSVKWSPTNEFQLVSGSYD----NTVKLWDVRSTKAPLYDIAGH--NDKVLSVDWNEGGLIVSGGAD- 409 (423)
T ss_pred eEEeeecchhhhhheecCCCCceEEEEEecC----CeEEEEEeccCCCcceeeccC--CceEEEEeccCCceEEeccCc-
Confidence 1223334444433 45899877665554443 3566667765321211 3333 334677888777555554433
Q ss_pred eeEEEEE
Q 006375 289 LQKITTY 295 (648)
Q Consensus 289 ~~~l~v~ 295 (648)
..|+++
T Consensus 410 -~~l~i~ 415 (423)
T KOG0313|consen 410 -NKLRIF 415 (423)
T ss_pred -ceEEEe
Confidence 345544
No 427
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=87.81 E-value=1.8 Score=49.40 Aligned_cols=138 Identities=14% Similarity=0.134 Sum_probs=78.4
Q ss_pred CCceEEEecccccCCCC------cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec---ccc-CccceeE
Q 006375 63 PPEHLILDENVKAEGRG------FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLV-GVTASVE 132 (648)
Q Consensus 63 ~~~~~lld~n~~~~~~~------~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~---~~~-~~~~~~~ 132 (648)
+++-.|.|.|......- .-.+..++|.-.=..|.-+ ++....+.|||+...++... ... ...+.++
T Consensus 138 ~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS----~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~ 213 (1049)
T KOG0307|consen 138 DGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILAS----GSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLA 213 (1049)
T ss_pred CCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhc----cCCCCCceeccccCCCcccccccCCCccceeeee
Confidence 46778899888653211 1123334444333333322 22233678899988765532 122 2256799
Q ss_pred EecCC--eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 133 WAGNE--ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 133 WspDg--~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
|.||+ +|+..+.++..-..++|-.+..+ ....+++.+ .+-.+...|.+.+..+++++. -+++++.++.++++
T Consensus 214 WhP~~aTql~~As~dd~~PviqlWDlR~as---sP~k~~~~H-~~GilslsWc~~D~~lllSsg--kD~~ii~wN~~tgE 287 (1049)
T KOG0307|consen 214 WHPDHATQLLVASGDDSAPVIQLWDLRFAS---SPLKILEGH-QRGILSLSWCPQDPRLLLSSG--KDNRIICWNPNTGE 287 (1049)
T ss_pred eCCCCceeeeeecCCCCCceeEeecccccC---Cchhhhccc-ccceeeeccCCCCchhhhccc--CCCCeeEecCCCce
Confidence 99999 66555544433334444333333 234455444 344567889998766666544 45788899988876
No 428
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=87.69 E-value=1.2 Score=44.16 Aligned_cols=131 Identities=12% Similarity=0.153 Sum_probs=74.4
Q ss_pred CCceEEEecccccCCCC---cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCe-eec--cccCccceeEEecC
Q 006375 63 PPEHLILDENVKAEGRG---FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGK--PLVGVTASVEWAGN 136 (648)
Q Consensus 63 ~~~~~lld~n~~~~~~~---~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~-~~~--~~~~~~~~~~WspD 136 (648)
++.-+|+|..+-..-+. ...-..+.|+|.+ .-|+. ++|.++||.+|+..-+. +.. .-..+...+.|||-
T Consensus 209 DrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPea--fnF~~---a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfspt 283 (433)
T KOG0268|consen 209 DRSIVLYDLRQASPLKKVILTMRTNTICWNPEA--FNFVA---ANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPT 283 (433)
T ss_pred CCceEEEecccCCccceeeeeccccceecCccc--cceee---ccccccceehhhhhhcccchhhcccceeEEEeccCCC
Confidence 34568888766443211 2233578999932 33443 67789999999865332 211 11123456889999
Q ss_pred C-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEEC
Q 006375 137 E-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV 206 (648)
Q Consensus 137 g-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl 206 (648)
| .|+-.++|. .|.++....+.+ .-+|....=...+.+.||-|.+||+-.+ +..+-+||...+
T Consensus 284 G~EfvsgsyDk-----sIRIf~~~~~~S--RdiYhtkRMq~V~~Vk~S~Dskyi~SGS-dd~nvRlWka~A 346 (433)
T KOG0268|consen 284 GQEFVSGSYDK-----SIRIFPVNHGHS--RDIYHTKRMQHVFCVKYSMDSKYIISGS-DDGNVRLWKAKA 346 (433)
T ss_pred cchhccccccc-----eEEEeecCCCcc--hhhhhHhhhheeeEEEEeccccEEEecC-CCcceeeeecch
Confidence 9 776554443 355666655533 2344333223345789999999987332 223345555544
No 429
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=87.62 E-value=27 Score=38.31 Aligned_cols=239 Identities=12% Similarity=0.116 Sum_probs=113.3
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCc-cceeEEecCC-eEEEEEeCCCCCCceEEEEE
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV-TASVEWAGNE-ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~-~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~ 157 (648)
...+.+++|.-||.+|+..-.. | .|.|=.+++.++.-..+.+. ...+.||+|. .++|...+ .+..+++
T Consensus 115 KSvV~SmsWn~dG~kIcIvYeD-G----avIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~Lf~~an-----ge~hlyd 184 (1189)
T KOG2041|consen 115 KSVVVSMSWNLDGTKICIVYED-G----AVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQALFKKAN-----GETHLYD 184 (1189)
T ss_pred ccEEEEEEEcCCCcEEEEEEcc-C----CEEEEeeccceecchhcchheccceeecccHHHHHhhhcC-----CcEEEec
Confidence 3567899999999999988643 3 34455555555544344443 3469999999 66665432 1222222
Q ss_pred CCCCCC----CcEEE-----Eee-----cCCCeEEE--EEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc
Q 006375 158 LEADQS----NDICL-----YHE-----KDDIYSLG--LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG 221 (648)
Q Consensus 158 l~~~~~----~~~~~-----~~~-----~~~~~~~~--~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~ 221 (648)
..+.-. .+-.+ ++. ..-.|+.+ ...-||.-.+++.-. .+...|.+ ...+.. +..+..+...
T Consensus 185 nqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~-nGr~QiMR-~eND~~-Pvv~dtgm~~ 261 (1189)
T KOG2041|consen 185 NQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYA-NGRMQIMR-SENDPE-PVVVDTGMKI 261 (1189)
T ss_pred ccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEc-Cceehhhh-hcCCCC-CeEEecccEe
Confidence 221100 01100 000 00001111 112346555554322 22222221 122333 5555444444
Q ss_pred eeeeEeecCCEEEEEeccCCCCC----cEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEc
Q 006375 222 VDTAASHRGNHFFITRRSDELFN----SELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRL 297 (648)
Q Consensus 222 ~~~~~s~dg~~l~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~ 297 (648)
+...|+|+|..|++..+..++.. .++.-+..=+ ...-.+ .-++..|.+++|.+.++-+....++ .|++-++
T Consensus 262 vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~G--~i~gtl-kvpg~~It~lsWEg~gLriA~Avds--fiyfanI 336 (1189)
T KOG2041|consen 262 VGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPYG--HIVGTL-KVPGSCITGLSWEGTGLRIAIAVDS--FIYFANI 336 (1189)
T ss_pred ecceecCCCcEEEEccCcccccCccccceEEEeccch--hheEEE-ecCCceeeeeEEcCCceEEEEEecc--eEEEEee
Confidence 55679999998888766532211 1222222111 110011 1123346777777766544333332 3443333
Q ss_pred CCCCCcccccCCCceeecCCCeeeeeCCCCcccccEEEEEEeeCCCCCE-EEEEECCCCcEEEE
Q 006375 298 PAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPS-VYDYDMDMGISVLK 360 (648)
Q Consensus 298 ~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~~~l~~~~ss~~~P~~-~~~~d~~~~~~~~~ 360 (648)
.. .+ -+.+=..++.|.++....|-- +.-||.++.+..++
T Consensus 337 RP-------------------~y-----kWgy~e~TvVy~y~~~e~p~y~i~Fwdtk~nek~vK 376 (1189)
T KOG2041|consen 337 RP-------------------EY-----KWGYIEETVVYVYQKEELPQYGIMFWDTKTNEKTVK 376 (1189)
T ss_pred cc-------------------cc-----eEEEeeeEEEEEEccCCCcceEEEEEecccChhhhh
Confidence 21 01 111123467888888877754 44577777664443
No 430
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.51 E-value=23 Score=34.60 Aligned_cols=75 Identities=11% Similarity=0.020 Sum_probs=48.1
Q ss_pred EEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceee---eEeecCCEEEEEeccCCCCCcEEEEEeCCC
Q 006375 179 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT---AASHRGNHFFITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 179 ~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~---~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 254 (648)
++.++|--+..++- .++....-+++|..+..+++.+........| .+||||.+||.+.|.-+..+.-|-++|...
T Consensus 72 gi~~~p~~~ravaf-ARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~ 149 (366)
T COG3490 72 GIAFHPALPRAVAF-ARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDARE 149 (366)
T ss_pred CeecCCCCcceEEE-EecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccc
Confidence 45667765544433 3344566788899887745555444333333 399999999999887555566677777653
No 431
>PF03283 PAE: Pectinacetylesterase
Probab=87.44 E-value=0.46 Score=48.91 Aligned_cols=37 Identities=24% Similarity=0.184 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHH
Q 006375 467 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVL 503 (648)
Q Consensus 467 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~ 503 (648)
.-+.+++++|..++.-++++|.+.|.|+||+-+..-+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 5678999999999889999999999999998765533
No 432
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=87.24 E-value=30 Score=34.13 Aligned_cols=68 Identities=16% Similarity=0.202 Sum_probs=45.6
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee-eccccCccceeEEecCC-eEEEEEeCCCCCCceEEEEECC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-GKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~-~~~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
.+..+++-|.|| ||.++-.+ ..++.|||-.|+.- ...+......+.|+|.| +++....+ .|-.|.++
T Consensus 129 ~Vt~lsiHPS~K-LALsVg~D----~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~------~i~i~q~d 197 (362)
T KOG0294|consen 129 QVTDLSIHPSGK-LALSVGGD----QVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRN------KIDIYQLD 197 (362)
T ss_pred ccceeEecCCCc-eEEEEcCC----ceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEecc------EEEEEecc
Confidence 488899999998 57676433 47889998877643 23445555569999999 77665432 24455555
Q ss_pred C
Q 006375 160 A 160 (648)
Q Consensus 160 ~ 160 (648)
+
T Consensus 198 ~ 198 (362)
T KOG0294|consen 198 N 198 (362)
T ss_pred c
Confidence 4
No 433
>PLN02454 triacylglycerol lipase
Probab=87.05 E-value=1 Score=46.61 Aligned_cols=40 Identities=18% Similarity=0.170 Sum_probs=30.4
Q ss_pred cHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHh
Q 006375 465 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 504 (648)
Q Consensus 465 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 504 (648)
..+++.+.++.|+++..-..-+|.++|||+||.||..+|.
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHH
Confidence 4468888888888764322236999999999999987765
No 434
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=86.70 E-value=42 Score=34.70 Aligned_cols=150 Identities=11% Similarity=0.164 Sum_probs=86.1
Q ss_pred eeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCC
Q 006375 130 SVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 208 (648)
Q Consensus 130 ~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~ 208 (648)
.++|.-.- .++.++. ....|..+++.++.. ...++..... .-...|.|....++++.. ....+-+.|+..
T Consensus 248 ~Ls~n~~~~nVLaSgs----aD~TV~lWD~~~g~p--~~s~~~~~k~-Vq~l~wh~~~p~~LLsGs--~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASGS----ADKTVKLWDVDTGKP--KSSITHHGKK-VQTLEWHPYEPSVLLSGS--YDGTVALKDCRD 318 (463)
T ss_pred HHHhccccceeEEecC----CCceEEEEEcCCCCc--ceehhhcCCc-eeEEEecCCCceEEEecc--ccceEEeeeccC
Confidence 46777666 6666543 334588889988843 3444322222 225678886655554332 234566667653
Q ss_pred CC----ceeEeeecccce-eeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCccee-EecCCCCcccceEEEeCCEEEE
Q 006375 209 PE----ELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFIDHLAV 282 (648)
Q Consensus 209 ~~----~~~~l~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 282 (648)
.. .++ +. ..+ ...|.|.....+|.+..+ +.|+.+|...++...| +..|.. .|.+++.+...-.+
T Consensus 319 ~~~s~~~wk-~~---g~VEkv~w~~~se~~f~~~tdd----G~v~~~D~R~~~~~vwt~~AHd~--~ISgl~~n~~~p~~ 388 (463)
T KOG0270|consen 319 PSNSGKEWK-FD---GEVEKVAWDPHSENSFFVSTDD----GTVYYFDIRNPGKPVWTLKAHDD--EISGLSVNIQTPGL 388 (463)
T ss_pred ccccCceEE-ec---cceEEEEecCCCceeEEEecCC----ceEEeeecCCCCCceeEEEeccC--CcceEEecCCCCcc
Confidence 22 121 11 122 245888887777777653 5799999988777778 555554 47777776643222
Q ss_pred EEecCCeeEEEEEEcC
Q 006375 283 YEREGGLQKITTYRLP 298 (648)
Q Consensus 283 ~~~~~~~~~l~v~~~~ 298 (648)
.....+...+.+++++
T Consensus 389 l~t~s~d~~Vklw~~~ 404 (463)
T KOG0270|consen 389 LSTASTDKVVKLWKFD 404 (463)
T ss_pred eeeccccceEEEEeec
Confidence 2233344456677766
No 435
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=86.55 E-value=0.71 Score=50.73 Aligned_cols=46 Identities=15% Similarity=0.257 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHcC----CCC---CCeEEEEeeChhHHHHHHHHhhCCCceeEE
Q 006375 467 TDFIACAEYLIKNC----YCT---KEKLCIEGRSAGGLLIGAVLNMRPDLFKAA 513 (648)
Q Consensus 467 ~D~~~~~~~l~~~~----~~d---~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~ 513 (648)
+=+.+|+.++.+.. .-+ |.-|+++||||||.+|-++++ .|...+..
T Consensus 157 EYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t-lkn~~~~s 209 (973)
T KOG3724|consen 157 EYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT-LKNEVQGS 209 (973)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh-hhhhccch
Confidence 44556777776542 122 677999999999988777776 46544443
No 436
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=86.44 E-value=34 Score=33.42 Aligned_cols=94 Identities=13% Similarity=-0.016 Sum_probs=61.8
Q ss_pred CCeEEEEEEEECCCCCeee-ccccCccceeEEecCC---eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEE
Q 006375 103 GDEIYTVYVIDIETGTPVG-KPLVGVTASVEWAGNE---ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSL 178 (648)
Q Consensus 103 G~e~~~l~v~dl~~g~~~~-~~~~~~~~~~~WspDg---~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 178 (648)
++-..+|.|||..|-+... ...++....-+|||=. .|+-+. .+..+|.+.|+.++. -.-.+..+. .-.+
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~g----tr~~~VrLCDi~SGs--~sH~LsGHr-~~vl 192 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAG----TRDVQVRLCDIASGS--FSHTLSGHR-DGVL 192 (397)
T ss_pred ccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEe----cCCCcEEEEeccCCc--ceeeecccc-CceE
Confidence 4556789999998866543 3556655568899865 454443 344678899998883 233333332 2345
Q ss_pred EEEeCCCCcEEEEEEccccccEEEE
Q 006375 179 GLQASESKKFLFIASESKITRFVFY 203 (648)
Q Consensus 179 ~~~~s~Dg~~l~~~~~~~~~~~l~~ 203 (648)
.+.|||...|++.+....+.-++|-
T Consensus 193 aV~Wsp~~e~vLatgsaDg~irlWD 217 (397)
T KOG4283|consen 193 AVEWSPSSEWVLATGSADGAIRLWD 217 (397)
T ss_pred EEEeccCceeEEEecCCCceEEEEE
Confidence 7899999999998766555444443
No 437
>PRK13615 lipoprotein LpqB; Provisional
Probab=86.40 E-value=44 Score=36.68 Aligned_cols=158 Identities=8% Similarity=-0.072 Sum_probs=84.0
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEecCCeEEEEEeCCCCCCceEEEEECCCCC
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 162 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~ 162 (648)
..++.+|+||+.+|+... . ..+++-...+....... ......++|.++|+++-. .+.. ...+.+.. .++
T Consensus 336 ~~s~avS~dg~~~A~v~~-~----~~l~vg~~~~~~~~~~~-~~~Lt~PS~d~~g~vWtv-~~g~--~~~l~~~~-~~G- 404 (557)
T PRK13615 336 ADAATLSADGRQAAVRNA-S----GVWSVGDGDRDAVLLDT-RPGLVAPSLDAQGYVWST-PASD--PRGLVAWG-PDG- 404 (557)
T ss_pred cccceEcCCCceEEEEcC-C----ceEEEecCCCcceeecc-CCccccCcCcCCCCEEEE-eCCC--ceEEEEec-CCC-
Confidence 367899999999999843 1 26777665522222111 122445889888855533 3222 23333322 122
Q ss_pred CCcEEE-EeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEEC--CCCCceeEe-e-eccc------ceeeeEeecCC
Q 006375 163 SNDICL-YHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV--SKPEELRVL-T-PRVV------GVDTAASHRGN 231 (648)
Q Consensus 163 ~~~~~~-~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl--~~~~~~~~l-~-~~~~------~~~~~~s~dg~ 231 (648)
+...+ .......-...+..|+||-++++.....+...|++.-+ .++. ++.| + ++.- .....|..++.
T Consensus 405 -~~~~v~v~~~~~~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~~-P~~L~~~p~~l~~~l~~v~sl~W~~~~~ 482 (557)
T PRK13615 405 -VGHPVAVSWTATGRVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGV-PTSLTTTPLELLASPGTPLDATWVDELD 482 (557)
T ss_pred -ceEEeeccccCCCeeEEEEeCCCccEEEEEEecCCCCEEEEEEEEeCCCc-ceEeeeccEEcccCcCcceeeEEcCCCE
Confidence 11111 11112233557899999999988776555566765322 3332 3333 2 2111 12345777665
Q ss_pred EEEEEeccCCCCCcEEEEEeCCCC
Q 006375 232 HFFITRRSDELFNSELLACPVDNT 255 (648)
Q Consensus 232 ~l~~~~~~~~~~~~~l~~~~~~~~ 255 (648)
|+.++... ..+..++++.+.++
T Consensus 483 -laVl~~~~-~~~~~v~~v~v~g~ 504 (557)
T PRK13615 483 -VATLTLAP-DGERQVELHQVGGP 504 (557)
T ss_pred -EEEEeccC-CCCceEEEEECCCc
Confidence 66665432 24567788888763
No 438
>PLN02408 phospholipase A1
Probab=85.76 E-value=1.2 Score=45.36 Aligned_cols=39 Identities=18% Similarity=0.036 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhh
Q 006375 467 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 505 (648)
Q Consensus 467 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 505 (648)
+.+.+.++.++++..-.+.+|.++|||+||.||..++..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 566677777776543334579999999999998777663
No 439
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=85.71 E-value=1.5 Score=42.11 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhh
Q 006375 467 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 505 (648)
Q Consensus 467 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 505 (648)
+++...++.+.++. ...+|.+.|||+||.+|..++..
T Consensus 112 ~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 112 NQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHH
Confidence 45555555555442 34789999999999988776654
No 440
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=85.69 E-value=37 Score=33.10 Aligned_cols=161 Identities=8% Similarity=0.069 Sum_probs=82.4
Q ss_pred CCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc-eeeeEeecCCEEEEEeccCCCCCcEEEEEeC
Q 006375 174 DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNSELLACPV 252 (648)
Q Consensus 174 ~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 252 (648)
..|.-++.+..|| .|+-++...+.+.|..+|+++++ ...-.+-... +--.+..-++.||.++.+. ...+++|.
T Consensus 44 ~aFTQGL~~~~~g-~LyESTG~yG~S~l~~~d~~tg~-~~~~~~l~~~~FgEGit~~~d~l~qLTWk~----~~~f~yd~ 117 (264)
T PF05096_consen 44 TAFTQGLEFLDDG-TLYESTGLYGQSSLRKVDLETGK-VLQSVPLPPRYFGEGITILGDKLYQLTWKE----GTGFVYDP 117 (264)
T ss_dssp T-EEEEEEEEETT-EEEEEECSTTEEEEEEEETTTSS-EEEEEE-TTT--EEEEEEETTEEEEEESSS----SEEEEEET
T ss_pred cccCccEEecCCC-EEEEeCCCCCcEEEEEEECCCCc-EEEEEECCccccceeEEEECCEEEEEEecC----CeEEEEcc
Confidence 3455566665666 45555666678999999999987 3322221111 1112455588899999973 47888898
Q ss_pred CCCCcceeEec-CCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCC-Cccc
Q 006375 253 DNTSETTVLIP-HRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE-SVFS 330 (648)
Q Consensus 253 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~-~~~~ 330 (648)
++..... .++ ..++ -++..+++.+++ .+|.++|+.++... -.. .+.+........+..+| ..+-
T Consensus 118 ~tl~~~~-~~~y~~EG---WGLt~dg~~Li~---SDGS~~L~~~dP~~--f~~-----~~~i~V~~~g~pv~~LNELE~i 183 (264)
T PF05096_consen 118 NTLKKIG-TFPYPGEG---WGLTSDGKRLIM---SDGSSRLYFLDPET--FKE-----VRTIQVTDNGRPVSNLNELEYI 183 (264)
T ss_dssp TTTEEEE-EEE-SSS-----EEEECSSCEEE---E-SSSEEEEE-TTT---SE-----EEEEE-EETTEE---EEEEEEE
T ss_pred ccceEEE-EEecCCcc---eEEEcCCCEEEE---ECCccceEEECCcc--cce-----EEEEEEEECCEECCCcEeEEEE
Confidence 7643222 222 2222 233445555543 36778899888652 211 11222211111111111 1111
Q ss_pred ccEEEEEEeeCCCCCEEEEEECCCCcE
Q 006375 331 SRILRFHYSSLRTPPSVYDYDMDMGIS 357 (648)
Q Consensus 331 ~~~l~~~~ss~~~P~~~~~~d~~~~~~ 357 (648)
+..++ .+--+-..+.++|+.+|+.
T Consensus 184 ~G~Iy---ANVW~td~I~~Idp~tG~V 207 (264)
T PF05096_consen 184 NGKIY---ANVWQTDRIVRIDPETGKV 207 (264)
T ss_dssp TTEEE---EEETTSSEEEEEETTT-BE
T ss_pred cCEEE---EEeCCCCeEEEEeCCCCeE
Confidence 23333 3444567899999999983
No 441
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=85.57 E-value=13 Score=36.11 Aligned_cols=142 Identities=12% Similarity=0.058 Sum_probs=74.4
Q ss_pred EEEeCCCCcEEEEEEccccccEEEEEECCCCCc-eeEe-eecccc--ee---eeEee--cCCEEEEEeccCCCCCcEEEE
Q 006375 179 GLQASESKKFLFIASESKITRFVFYLDVSKPEE-LRVL-TPRVVG--VD---TAASH--RGNHFFITRRSDELFNSELLA 249 (648)
Q Consensus 179 ~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~-~~~l-~~~~~~--~~---~~~s~--dg~~l~~~~~~~~~~~~~l~~ 249 (648)
-+.|-|++..++... .++|.+++++.+.+ ...+ .+.... .. ..||| ||..+..+.. ..|.-
T Consensus 128 cvew~Pns~klasm~----dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d------~tl~~ 197 (370)
T KOG1007|consen 128 CVEWEPNSDKLASMD----DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSD------STLQF 197 (370)
T ss_pred eEEEcCCCCeeEEec----cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCC------CcEEE
Confidence 367999998887543 57788888887652 1222 121111 11 23876 6666554433 24666
Q ss_pred EeCCCCCcceeEecCCCCcccceEEEeCC--EEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCCC
Q 006375 250 CPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSES 327 (648)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~ 327 (648)
+|+.+ ....+.+....+..+.++.+..+ ++++..-+++ .+.+|+......++ ..+++...-++.+.+
T Consensus 198 ~D~RT-~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdg--yvriWD~R~tk~pv--------~el~~HsHWvW~VRf 266 (370)
T KOG1007|consen 198 WDLRT-MKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDG--YVRIWDTRKTKFPV--------QELPGHSHWVWAVRF 266 (370)
T ss_pred EEccc-hhhhcchhhhhcceeeeccCCCCceEEEEEcCCCc--cEEEEeccCCCccc--------cccCCCceEEEEEEe
Confidence 77765 33344444333334556666555 4555554544 56666765322222 223333323444555
Q ss_pred cccccEEEEEEeeC
Q 006375 328 VFSSRILRFHYSSL 341 (648)
Q Consensus 328 ~~~~~~l~~~~ss~ 341 (648)
++.-+.|+++.+|.
T Consensus 267 n~~hdqLiLs~~SD 280 (370)
T KOG1007|consen 267 NPEHDQLILSGGSD 280 (370)
T ss_pred cCccceEEEecCCC
Confidence 55566666665544
No 442
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=85.43 E-value=35 Score=32.66 Aligned_cols=153 Identities=12% Similarity=0.062 Sum_probs=88.0
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-----cccCccceeEEecCC-eEEEEEeCCCCCCceEEEE
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-----PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-----~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~ 156 (648)
+..+.||+...-++++...+| .|.++|+. ....+. .-..++ ++.|.+-. .++.++. -+..-+||.
T Consensus 63 LfdV~Wse~~e~~~~~a~GDG----SLrl~d~~-~~s~Pi~~~kEH~~EV~-Svdwn~~~r~~~ltsS--WD~TiKLW~- 133 (311)
T KOG0277|consen 63 LFDVAWSENHENQVIAASGDG----SLRLFDLT-MPSKPIHKFKEHKREVY-SVDWNTVRRRIFLTSS--WDGTIKLWD- 133 (311)
T ss_pred eeEeeecCCCcceEEEEecCc----eEEEeccC-CCCcchhHHHhhhhheE-EeccccccceeEEeec--cCCceEeec-
Confidence 446789999999999988666 57778843 222221 112233 48899876 6666653 122334443
Q ss_pred ECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecc-cceeeeEeecCCEEEE
Q 006375 157 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFI 235 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~ 235 (648)
...+ +....|.+. ........|||--.-++.+.+....-+||-++..+. ...+.... ......|+.-...++.
T Consensus 134 -~~r~--~Sv~Tf~gh-~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk--~~~i~ah~~Eil~cdw~ky~~~vl~ 207 (311)
T KOG0277|consen 134 -PNRP--NSVQTFNGH-NSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGK--FMSIEAHNSEILCCDWSKYNHNVLA 207 (311)
T ss_pred -CCCC--cceEeecCC-ccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCc--eeEEEeccceeEeecccccCCcEEE
Confidence 3333 234456554 344567889997666665555555566666655533 22232222 2233468888887777
Q ss_pred EeccCCCCCcEEEEEeCCC
Q 006375 236 TRRSDELFNSELLACPVDN 254 (648)
Q Consensus 236 ~~~~~~~~~~~l~~~~~~~ 254 (648)
+...+ .-|...|+..
T Consensus 208 Tg~vd----~~vr~wDir~ 222 (311)
T KOG0277|consen 208 TGGVD----NLVRGWDIRN 222 (311)
T ss_pred ecCCC----ceEEEEehhh
Confidence 65542 3566667754
No 443
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=85.37 E-value=40 Score=33.19 Aligned_cols=148 Identities=12% Similarity=0.081 Sum_probs=82.1
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCccceeEEecCCeEEEEEeCCCCCCceEEEEECCC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 160 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~ 160 (648)
.++.+++||.+..|+.++ .+| .|.++|+.+.+.+.. .........+|.++..++.... ..+|.++|+.+
T Consensus 15 ~IS~v~f~~~~~~LLvss-WDg----slrlYdv~~~~l~~~~~~~~plL~c~F~d~~~~~~G~~-----dg~vr~~Dln~ 84 (323)
T KOG1036|consen 15 GISSVKFSPSSSDLLVSS-WDG----SLRLYDVPANSLKLKFKHGAPLLDCAFADESTIVTGGL-----DGQVRRYDLNT 84 (323)
T ss_pred ceeeEEEcCcCCcEEEEe-ccC----cEEEEeccchhhhhheecCCceeeeeccCCceEEEecc-----CceEEEEEecC
Confidence 467889999999888876 667 688888877654432 2233344577877777766443 34699999998
Q ss_pred CCCCcEEEEeecCCCeEEEEEeCC-CCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEEecc
Q 006375 161 DQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRS 239 (648)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~-Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~ 239 (648)
+. ...+-.. +.... .+..++ +|. +++.+ -+..|-++|..... ...+.....-.+..+-.|..|++-+..
T Consensus 85 ~~--~~~igth-~~~i~-ci~~~~~~~~--vIsgs--WD~~ik~wD~R~~~--~~~~~d~~kkVy~~~v~g~~LvVg~~~ 154 (323)
T KOG1036|consen 85 GN--EDQIGTH-DEGIR-CIEYSYEVGC--VISGS--WDKTIKFWDPRNKV--VVGTFDQGKKVYCMDVSGNRLVVGTSD 154 (323)
T ss_pred Cc--ceeeccC-CCceE-EEEeeccCCe--EEEcc--cCccEEEEeccccc--cccccccCceEEEEeccCCEEEEeecC
Confidence 73 2233322 22221 233333 232 22211 23456667765422 112222222335566667777664543
Q ss_pred CCCCCcEEEEEeCCC
Q 006375 240 DELFNSELLACPVDN 254 (648)
Q Consensus 240 ~~~~~~~l~~~~~~~ 254 (648)
.++..+|+..
T Consensus 155 -----r~v~iyDLRn 164 (323)
T KOG1036|consen 155 -----RKVLIYDLRN 164 (323)
T ss_pred -----ceEEEEEccc
Confidence 3667777754
No 444
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=84.74 E-value=4.2 Score=37.94 Aligned_cols=71 Identities=21% Similarity=0.145 Sum_probs=41.7
Q ss_pred CCCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHH-HHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhh---CCCc
Q 006375 434 RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIA-CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM---RPDL 509 (648)
Q Consensus 434 ~G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~---~p~~ 509 (648)
..+.|+.++.+|.+.. ......++++.. .++.+... ....++.++|+|+||.++..++.+ .++.
T Consensus 24 ~~~~v~~~~~~g~~~~----------~~~~~~~~~~~~~~~~~l~~~--~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~ 91 (212)
T smart00824 24 GRRDVSALPLPGFGPG----------EPLPASADALVEAQAEAVLRA--AGGRPFVLVGHSSGGLLAHAVAARLEARGIP 91 (212)
T ss_pred CCccEEEecCCCCCCC----------CCCCCCHHHHHHHHHHHHHHh--cCCCCeEEEEECHHHHHHHHHHHHHHhCCCC
Confidence 4688999998876421 111123444433 22333332 223679999999999998777664 3444
Q ss_pred eeEEEec
Q 006375 510 FKAAVAA 516 (648)
Q Consensus 510 ~~a~v~~ 516 (648)
+..+++.
T Consensus 92 ~~~l~~~ 98 (212)
T smart00824 92 PAAVVLL 98 (212)
T ss_pred CcEEEEE
Confidence 5555544
No 445
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=84.57 E-value=2.3 Score=38.87 Aligned_cols=39 Identities=15% Similarity=0.177 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhhCC
Q 006375 468 DFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP 507 (648)
Q Consensus 468 D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p 507 (648)
++...++-|.... ....++.++|||||+.+++.++.+.+
T Consensus 93 ~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~ 131 (177)
T PF06259_consen 93 RLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGG 131 (177)
T ss_pred HHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCC
Confidence 3444444444433 45679999999999999999888733
No 446
>PLN02571 triacylglycerol lipase
Probab=84.56 E-value=1.4 Score=45.70 Aligned_cols=41 Identities=15% Similarity=0.058 Sum_probs=29.8
Q ss_pred cHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHhh
Q 006375 465 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 505 (648)
Q Consensus 465 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 505 (648)
..+++.+.++.|+++..-..-+|.++|||+||.||..+|..
T Consensus 206 ar~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 206 ARDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 34677788888776532222379999999999998776653
No 447
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=84.38 E-value=85 Score=36.17 Aligned_cols=75 Identities=19% Similarity=0.208 Sum_probs=44.6
Q ss_pred EeCCCC-cEEEEEEcccc-ccEEEEEECCCCCceeEeeeccccee--eeEeecCCEEEEEeccCCCCCcEEEEEeCCCC
Q 006375 181 QASESK-KFLFIASESKI-TRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITRRSDELFNSELLACPVDNT 255 (648)
Q Consensus 181 ~~s~Dg-~~l~~~~~~~~-~~~l~~~dl~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 255 (648)
.++.|+ .++.+.+...+ ...+..+....+..+..++.....+. +.++.+.+.++|.+..++....+|+++++...
T Consensus 346 ~~~~d~~~~~~~~~~~~~~~~hi~~~~~~~~~~~~~lt~g~w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~~~~ 424 (755)
T KOG2100|consen 346 VFSSDGSSYLKVDSVSDGGYNHIAYLKLSNGSEPRMLTSGNWEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISLGSG 424 (755)
T ss_pred eEeecCCceeEEEeeccCCEEEEEEEEcCCCCccccccccceEEEEeccccCCCceEEEEecCCCCCceEEEEEEcccc
Confidence 356665 34444343333 46666666666521444444332222 23556788999998876566789999998753
No 448
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=84.24 E-value=35 Score=37.06 Aligned_cols=144 Identities=15% Similarity=0.141 Sum_probs=69.4
Q ss_pred EEEEEEEECCCCCeeec-ccc---------Cc-c--ceeEEecCCeEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeec
Q 006375 106 IYTVYVIDIETGTPVGK-PLV---------GV-T--ASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEK 172 (648)
Q Consensus 106 ~~~l~v~dl~~g~~~~~-~~~---------~~-~--~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 172 (648)
...|++||+.+|..+.. ... +. . .+++=.+.|.++..+ +-...|..++-.+.. ..+-+..+
T Consensus 139 D~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsG----gtek~lr~wDprt~~--kimkLrGH 212 (735)
T KOG0308|consen 139 DRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSG----GTEKDLRLWDPRTCK--KIMKLRGH 212 (735)
T ss_pred CccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEec----CcccceEEecccccc--ceeeeecc
Confidence 45899999998854211 111 11 1 112222333343322 222346666666652 22222222
Q ss_pred CCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeEeeeccccee-eeEeecCCEEEEEeccCCCCCcEEEEE
Q 006375 173 DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLAC 250 (648)
Q Consensus 173 ~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~ 250 (648)
....- .+-.++||+.++-.++ +.-|.++||.... -.+... ..+++. ...+|+=+.+|+-.. ...|+++
T Consensus 213 TdNVr-~ll~~dDGt~~ls~sS---DgtIrlWdLgqQrCl~T~~v-H~e~VWaL~~~~sf~~vYsG~r-----d~~i~~T 282 (735)
T KOG0308|consen 213 TDNVR-VLLVNDDGTRLLSASS---DGTIRLWDLGQQRCLATYIV-HKEGVWALQSSPSFTHVYSGGR-----DGNIYRT 282 (735)
T ss_pred ccceE-EEEEcCCCCeEeecCC---CceEEeeeccccceeeeEEe-ccCceEEEeeCCCcceEEecCC-----CCcEEec
Confidence 22222 3457899999874332 2446777876543 111111 222222 224444444554322 2579999
Q ss_pred eCCCCCcceeEecCC
Q 006375 251 PVDNTSETTVLIPHR 265 (648)
Q Consensus 251 ~~~~~~~~~~~~~~~ 265 (648)
|+..+...+.++.++
T Consensus 283 dl~n~~~~tlick~d 297 (735)
T KOG0308|consen 283 DLRNPAKSTLICKED 297 (735)
T ss_pred ccCCchhheEeecCC
Confidence 998764444455544
No 449
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=83.78 E-value=34 Score=34.67 Aligned_cols=148 Identities=13% Similarity=0.206 Sum_probs=75.6
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCC------CCeeecc-ccC--ccceeEEecCCeEEEEEeCCCCCC
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET------GTPVGKP-LVG--VTASVEWAGNEALVYITMDEILRP 150 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~------g~~~~~~-~~~--~~~~~~WspDg~l~y~~~~~~~~~ 150 (648)
+--+..+.+|.+|++||- |++..++.||.++. .++.... -+. ....++|.-.++++|.. .+.
T Consensus 56 ~GCiNAlqFS~N~~~L~S-----GGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG----~~~ 126 (609)
T KOG4227|consen 56 TGCINALQFSHNDRFLAS-----GGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSG----ERW 126 (609)
T ss_pred ccccceeeeccCCeEEee-----cCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecC----CCc
Confidence 345678899999999873 44456777787753 1221110 011 12336665445777864 345
Q ss_pred ceEEEEECCCCCCCcEEEEeecCC-CeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeEeeecc--cce-eee
Q 006375 151 DKAWLHKLEADQSNDICLYHEKDD-IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRV--VGV-DTA 225 (648)
Q Consensus 151 ~~l~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~--~~~-~~~ 225 (648)
.+|..|++.+. +..-++.+.+. .-......+|-...++..+ ....+-++|..... ...++.+.. ..+ ...
T Consensus 127 ~~VI~HDiEt~--qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t---~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~ 201 (609)
T KOG4227|consen 127 GTVIKHDIETK--QSIYVANENNNRGDVYHMDQHPTDNTLIVVT---RAKLVSFIDNRDRQNPISLVLPANSGKNFYTAE 201 (609)
T ss_pred ceeEeeecccc--eeeeeecccCcccceeecccCCCCceEEEEe---cCceEEEEeccCCCCCCceeeecCCCccceeee
Confidence 67999999987 34556655542 1222344566433332222 12345566665433 222222211 111 122
Q ss_pred EeecCCEEEEEeccCC
Q 006375 226 ASHRGNHFFITRRSDE 241 (648)
Q Consensus 226 ~s~dg~~l~~~~~~~~ 241 (648)
+.|---.|+.+.+..+
T Consensus 202 F~P~~P~Li~~~~~~~ 217 (609)
T KOG4227|consen 202 FHPETPALILVNSETG 217 (609)
T ss_pred ecCCCceeEEeccccC
Confidence 5555555655555433
No 450
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=83.60 E-value=7.3 Score=39.15 Aligned_cols=126 Identities=17% Similarity=0.155 Sum_probs=73.2
Q ss_pred ecccccCCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee----ccccCccceeEEecCCeEEEEEeC
Q 006375 70 DENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG----KPLVGVTASVEWAGNEALVYITMD 145 (648)
Q Consensus 70 d~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~----~~~~~~~~~~~WspDg~l~y~~~~ 145 (648)
|.+.+.. -+-++-.++|||..+-+.++...+| .|+|||+..+.... .....-..-++|+.+-.++.+..+
T Consensus 249 d~~Pf~g--H~~SVEDLqWSptE~~vfaScS~Dg----sIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~D 322 (440)
T KOG0302|consen 249 DQRPFTG--HTKSVEDLQWSPTEDGVFASCSCDG----SIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGD 322 (440)
T ss_pred cCccccc--cccchhhhccCCccCceEEeeecCc----eEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCC
Confidence 4444432 2467789999999999999988877 69999998884332 111222334889877654333333
Q ss_pred CCCCCceEEEEECCCCCC-CcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCC
Q 006375 146 EILRPDKAWLHKLEADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 208 (648)
Q Consensus 146 ~~~~~~~l~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~ 208 (648)
+ .. +.+++|..-+. +....|.-+... ...+.|+|....++..+. ..+.|-++|+..
T Consensus 323 d--Gt--~~iwDLR~~~~~~pVA~fk~Hk~p-ItsieW~p~e~s~iaasg--~D~QitiWDlsv 379 (440)
T KOG0302|consen 323 D--GT--LSIWDLRQFKSGQPVATFKYHKAP-ITSIEWHPHEDSVIAASG--EDNQITIWDLSV 379 (440)
T ss_pred C--ce--EEEEEhhhccCCCcceeEEeccCC-eeEEEeccccCceEEecc--CCCcEEEEEeec
Confidence 2 12 33344433221 233444444333 347899997766665443 345666666654
No 451
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=83.45 E-value=19 Score=38.70 Aligned_cols=85 Identities=12% Similarity=0.189 Sum_probs=52.5
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCccceeEEecCCeEEEEEeCCCCCCceEEEEECCCC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 161 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~ 161 (648)
.+...++||+.++++..... | .|.++|...+........-....++|.|||.++.+..+ ..++..+|++-.
T Consensus 261 ~v~~ca~sp~E~kLvlGC~D-g----SiiLyD~~~~~t~~~ka~~~P~~iaWHp~gai~~V~s~----qGelQ~FD~ALs 331 (545)
T PF11768_consen 261 QVICCARSPSEDKLVLGCED-G----SIILYDTTRGVTLLAKAEFIPTLIAWHPDGAIFVVGSE----QGELQCFDMALS 331 (545)
T ss_pred cceEEecCcccceEEEEecC-C----eEEEEEcCCCeeeeeeecccceEEEEcCCCcEEEEEcC----CceEEEEEeecC
Confidence 34567889999999988652 3 68899987765443222222345899999966666532 345667776655
Q ss_pred CCCcEEEEeecCCC
Q 006375 162 QSNDICLYHEKDDI 175 (648)
Q Consensus 162 ~~~~~~~~~~~~~~ 175 (648)
.-+-.++-++..+.
T Consensus 332 pi~~qLlsEd~~P~ 345 (545)
T PF11768_consen 332 PIKMQLLSEDATPK 345 (545)
T ss_pred ccceeeccccCCCc
Confidence 33334443443333
No 452
>PLN02324 triacylglycerol lipase
Probab=83.41 E-value=1.8 Score=44.84 Aligned_cols=40 Identities=10% Similarity=0.053 Sum_probs=29.7
Q ss_pred cHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHh
Q 006375 465 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 504 (648)
Q Consensus 465 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 504 (648)
..+.+.+.++.|+++..-..-+|.++|||+||.||..+|.
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 3466777788888764322348999999999999877765
No 453
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=83.22 E-value=50 Score=32.66 Aligned_cols=139 Identities=15% Similarity=0.161 Sum_probs=71.2
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc--cCccceeEEecCC--eEEEEEeCCCCCCceEEEEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE--ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~WspDg--~l~y~~~~~~~~~~~l~~~~ 157 (648)
++..+++ +|.++|- |+-.-+|+|+|+.........+ .+....+.|.++- .-+....+ ..++..++
T Consensus 45 sitavAV--s~~~~aS-----GssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sd----DG~i~iw~ 113 (362)
T KOG0294|consen 45 SITALAV--SGPYVAS-----GSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSD----DGHIIIWR 113 (362)
T ss_pred ceeEEEe--cceeEec-----cCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecC----CCcEEEEE
Confidence 3444443 4666653 3334589999998765543211 2233446676664 22233322 23455555
Q ss_pred CCCCCCCcEEEEeec-CCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeee-cccceeeeEeecCCEEEE
Q 006375 158 LEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVDTAASHRGNHFFI 235 (648)
Q Consensus 158 l~~~~~~~~~~~~~~-~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~ 235 (648)
.+. .+++-.-. ...-..+++..|.|+..+ +.. ++..|.+++|-.+. ...+.+ ........|+|.|+++++
T Consensus 114 ~~~----W~~~~slK~H~~~Vt~lsiHPS~KLAL-sVg--~D~~lr~WNLV~Gr-~a~v~~L~~~at~v~w~~~Gd~F~v 185 (362)
T KOG0294|consen 114 VGS----WELLKSLKAHKGQVTDLSIHPSGKLAL-SVG--GDQVLRTWNLVRGR-VAFVLNLKNKATLVSWSPQGDHFVV 185 (362)
T ss_pred cCC----eEEeeeecccccccceeEecCCCceEE-EEc--CCceeeeehhhcCc-cceeeccCCcceeeEEcCCCCEEEE
Confidence 443 22222111 111244678889987544 333 34557777777665 111111 122233568999998887
Q ss_pred Eecc
Q 006375 236 TRRS 239 (648)
Q Consensus 236 ~~~~ 239 (648)
....
T Consensus 186 ~~~~ 189 (362)
T KOG0294|consen 186 SGRN 189 (362)
T ss_pred Eecc
Confidence 7653
No 454
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=83.04 E-value=17 Score=40.62 Aligned_cols=111 Identities=15% Similarity=0.199 Sum_probs=66.7
Q ss_pred EeeEEeCCCCCEEEEEEeCCCCeEEEEEEEE-CC-CCCe-eeccccC---ccceeEEecCCeEEEEEeCCCCCCceEEEE
Q 006375 83 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVID-IE-TGTP-VGKPLVG---VTASVEWAGNEALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 83 ~~~~~~SPDG~~la~~~~~~G~e~~~l~v~d-l~-~g~~-~~~~~~~---~~~~~~WspDg~l~y~~~~~~~~~~~l~~~ 156 (648)
+...++||.|+++|-+-. .| +|.||. .. .+.. ....+.+ .....+||+||..+|++ ++-..+.++
T Consensus 208 ~t~~~~spn~~~~Aa~d~-dG----rI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSG----G~E~VLv~W 278 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDS-DG----RILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSG----GREGVLVLW 278 (792)
T ss_pred ceeEEeccccceEEEecc-CC----cEEEEeccccccccccceEEEecccccceeEEecCCceEeec----ccceEEEEE
Confidence 566899999999987644 35 466664 33 1222 1222222 14569999999444553 344557889
Q ss_pred ECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCC
Q 006375 157 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 209 (648)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~ 209 (648)
.++++. .+. +..- ..-...+.+|||+....+... ++.|.++.+.+.
T Consensus 279 q~~T~~--kqf-LPRL-gs~I~~i~vS~ds~~~sl~~~---DNqI~li~~~dl 324 (792)
T KOG1963|consen 279 QLETGK--KQF-LPRL-GSPILHIVVSPDSDLYSLVLE---DNQIHLIKASDL 324 (792)
T ss_pred eecCCC--ccc-cccc-CCeeEEEEEcCCCCeEEEEec---CceEEEEeccch
Confidence 999984 222 2111 233557889999987655433 466777766443
No 455
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=82.70 E-value=42 Score=31.34 Aligned_cols=132 Identities=12% Similarity=0.166 Sum_probs=67.1
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEE----ECCCCCeee-----------ccccCccceeEEecCCeEEEEEe
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVI----DIETGTPVG-----------KPLVGVTASVEWAGNEALVYITM 144 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~----dl~~g~~~~-----------~~~~~~~~~~~WspDg~l~y~~~ 144 (648)
...+....|.|.|++-|..++ +..++|.-+ |+..+...+ ..-.+.....+|||+|.++-+..
T Consensus 32 sqairav~fhp~g~lyavgsn---skt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgs 108 (350)
T KOG0641|consen 32 SQAIRAVAFHPAGGLYAVGSN---SKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGS 108 (350)
T ss_pred hhheeeEEecCCCceEEeccC---CceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecC
Confidence 457788999999998887654 334555544 343222111 01122345589999997766665
Q ss_pred CCCCCCceEEEEECCCCCC-CcEEEEeecCCCeEEEEEeC---CCCcEEEEEEccccccEEEEEECCCCCceeEeeec
Q 006375 145 DEILRPDKAWLHKLEADQS-NDICLYHEKDDIYSLGLQAS---ESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR 218 (648)
Q Consensus 145 ~~~~~~~~l~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~s---~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~ 218 (648)
++ ..-++..++.++.+. ...+-|.-.|... -+..+- ..|..|++ +..-++-.||+-|...++.+..+...
T Consensus 109 nd--k~ik~l~fn~dt~~~~g~dle~nmhdgti-rdl~fld~~~s~~~il~-s~gagdc~iy~tdc~~g~~~~a~sgh 182 (350)
T KOG0641|consen 109 ND--KTIKVLPFNADTCNATGHDLEFNMHDGTI-RDLAFLDDPESGGAILA-SAGAGDCKIYITDCGRGQGFHALSGH 182 (350)
T ss_pred CC--ceEEEEecccccccccCcceeeeecCCce-eeeEEecCCCcCceEEE-ecCCCcceEEEeecCCCCcceeecCC
Confidence 33 233444444443321 1112222222221 112222 22333443 34445678888888777644444443
No 456
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=82.43 E-value=23 Score=34.52 Aligned_cols=36 Identities=36% Similarity=0.389 Sum_probs=27.6
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV 120 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~ 120 (648)
+..-..+.||||+..|||+.+. | +|+|+|+.+.+..
T Consensus 43 ~PQWRkl~WSpD~tlLa~a~S~-G----~i~vfdl~g~~lf 78 (282)
T PF15492_consen 43 NPQWRKLAWSPDCTLLAYAEST-G----TIRVFDLMGSELF 78 (282)
T ss_pred CchheEEEECCCCcEEEEEcCC-C----eEEEEecccceeE
Confidence 3455678999999999999763 3 7889999875543
No 457
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=82.08 E-value=2 Score=46.40 Aligned_cols=75 Identities=12% Similarity=0.133 Sum_probs=50.2
Q ss_pred CchhHHHHHHCCCEEEEEccCCCCCCChhhhhccccc-CCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHH
Q 006375 424 FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL-KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 502 (648)
Q Consensus 424 ~~~~~~~l~~~G~~v~~~~~rG~g~~g~~~~~~~~~~-~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~ 502 (648)
|...+..|++.||. --|.+|. ..+|+.+.... .+..-+..+...++.+.... ..++|.|+||||||.++...
T Consensus 158 w~kLIe~L~~iGY~--~~nL~gA---PYDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNMYMA---AYDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred HHHHHHHHHHcCCC--CCceeec---ccccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHH
Confidence 35667888999997 4566643 34676553222 22344567777777766542 23799999999999999887
Q ss_pred Hhh
Q 006375 503 LNM 505 (648)
Q Consensus 503 ~~~ 505 (648)
+..
T Consensus 231 L~w 233 (642)
T PLN02517 231 MKW 233 (642)
T ss_pred HHh
Confidence 764
No 458
>PLN02802 triacylglycerol lipase
Probab=81.66 E-value=2.2 Score=45.17 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHh
Q 006375 467 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 504 (648)
Q Consensus 467 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 504 (648)
+++...++.|++...-...+|.|+|||+||.||..++.
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~ 349 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVAD 349 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHH
Confidence 56777777777653222348999999999998876665
No 459
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=81.47 E-value=6.3 Score=39.62 Aligned_cols=124 Identities=15% Similarity=0.082 Sum_probs=71.9
Q ss_pred CCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCccccccccc---------CCCCCCCcccccccCC---CCCHHH
Q 006375 482 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML---------DPTIPLTTAEWEEWGD---PWKEEF 549 (648)
Q Consensus 482 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~~~~~~---------~~~~~~~~~~~~~~g~---~~~~~~ 549 (648)
..-++..|.|.|--|..+...|...|. +.|+|..+ .|.+.... ..+-|.....|-+-|- .+.+..
T Consensus 231 ~~Ik~F~VTGaSKRgWttwLTAIaDpr-v~aIvp~v--~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~f 307 (507)
T COG4287 231 VEIKGFMVTGASKRGWTTWLTAIADPR-VFAIVPFV--YDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLF 307 (507)
T ss_pred eeeeeEEEeccccchHHHHHHHhcCcc-hhhhhhhH--HhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHH
Confidence 445899999999999988777776775 44444432 45443220 0011111111100011 123333
Q ss_pred HHHHHcCCccccC-----CCCCCCeEEEeecCCCCccCCchHHHHHHHHHhcCCCCCeEEEEecCCCCccC
Q 006375 550 YFYMKSYSPVDNV-----KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 615 (648)
Q Consensus 550 ~~~~~~~sp~~~~-----~~~~~P~~li~~g~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~ 615 (648)
...+.-.+|+... .+...| -.|+.|..|+..++..+.-++..|...+ -++..++..|..
T Consensus 308 kqL~~IiDPlay~~try~~RLalp-KyivnaSgDdff~pDsa~lYyd~LPG~k------aLrmvPN~~H~~ 371 (507)
T COG4287 308 KQLLEIIDPLAYRNTRYQLRLALP-KYIVNASGDDFFVPDSANLYYDDLPGEK------ALRMVPNDPHNL 371 (507)
T ss_pred HHHHHhhcHHHHhhhhhhhhcccc-ceeecccCCcccCCCccceeeccCCCce------eeeeCCCCcchh
Confidence 3344456777655 345778 7777888888888999999999886432 234445888854
No 460
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=81.29 E-value=84 Score=33.86 Aligned_cols=31 Identities=23% Similarity=0.276 Sum_probs=23.4
Q ss_pred eeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCC
Q 006375 84 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT 118 (648)
Q Consensus 84 ~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~ 118 (648)
..+.+||||+||.-+ |.-..+|.++|++.-.
T Consensus 55 t~ik~s~DGqY~lAt----G~YKP~ikvydlanLS 85 (703)
T KOG2321|consen 55 TRIKVSPDGQYLLAT----GTYKPQIKVYDLANLS 85 (703)
T ss_pred ceeEecCCCcEEEEe----cccCCceEEEEcccce
Confidence 478999999998754 4445689999987643
No 461
>PLN02606 palmitoyl-protein thioesterase
Probab=81.16 E-value=13 Score=36.92 Aligned_cols=100 Identities=15% Similarity=0.106 Sum_probs=55.4
Q ss_pred CCcEEEEecCCCCCCCCCCCchhHHHHHHC-CCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCC
Q 006375 405 SDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 483 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 483 (648)
+.| ||+.||-......+++......+.+. |.-+.++. -|.+. -..| -.+..+.+..+.+.|.+....
T Consensus 26 ~~P-vViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~-~~s~--------~~~~~~Qv~~vce~l~~~~~L- 93 (306)
T PLN02606 26 SVP-FVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV-QDSL--------FMPLRQQASIACEKIKQMKEL- 93 (306)
T ss_pred CCC-EEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc-cccc--------ccCHHHHHHHHHHHHhcchhh-
Confidence 456 55569954444444444444444323 66555554 23211 0011 113345666666666654333
Q ss_pred CCeEEEEeeChhHHHHHHHHhhCCC--ceeEEEec
Q 006375 484 KEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAA 516 (648)
Q Consensus 484 ~~~i~i~G~S~GG~l~~~~~~~~p~--~~~a~v~~ 516 (648)
++-+-++|+|.||.++=+++.+.|+ .++-.|..
T Consensus 94 ~~G~naIGfSQGglflRa~ierc~~~p~V~nlISl 128 (306)
T PLN02606 94 SEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSL 128 (306)
T ss_pred cCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEe
Confidence 2468999999999988888887766 25555543
No 462
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=80.96 E-value=58 Score=31.78 Aligned_cols=149 Identities=12% Similarity=0.040 Sum_probs=71.0
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccC--ccceeEEecCCeEEEEEeCCCCCCceEEEEECCCCC
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 162 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~--~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~ 162 (648)
.+..+|||. +=|+.+..| .|--+|.+||+...-.+.. .-..+.--|||..+++-. ...|.+++-.+..
T Consensus 66 dvapapdG~-VWft~qg~g----aiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~-----~~aI~R~dpkt~e 135 (353)
T COG4257 66 DVAPAPDGA-VWFTAQGTG----AIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDT-----GLAIGRLDPKTLE 135 (353)
T ss_pred ccccCCCCc-eEEecCccc----cceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecC-----cceeEEecCcccc
Confidence 457789995 345544333 5777899999876544432 223466678884333321 1135555443432
Q ss_pred CCcEEEE-eecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccccee--eeEeecCCEEEEEecc
Q 006375 163 SNDICLY-HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITRRS 239 (648)
Q Consensus 163 ~~~~~~~-~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~~~~ 239 (648)
.+.-.+- +..+.. .....+.++|. |.|+....-.. ++|-.++. ++..-.-....- ....|||+ +||.+-.
T Consensus 136 vt~f~lp~~~a~~n-let~vfD~~G~-lWFt~q~G~yG---rLdPa~~~-i~vfpaPqG~gpyGi~atpdGs-vwyasla 208 (353)
T COG4257 136 VTRFPLPLEHADAN-LETAVFDPWGN-LWFTGQIGAYG---RLDPARNV-ISVFPAPQGGGPYGICATPDGS-VWYASLA 208 (353)
T ss_pred eEEeecccccCCCc-ccceeeCCCcc-EEEeeccccce---ecCcccCc-eeeeccCCCCCCcceEECCCCc-EEEEecc
Confidence 2111111 112222 22456677774 44543332111 33443332 222111111111 23678886 7777665
Q ss_pred CCCCCcEEEEEeCCC
Q 006375 240 DELFNSELLACPVDN 254 (648)
Q Consensus 240 ~~~~~~~l~~~~~~~ 254 (648)
+ .-|.++|...
T Consensus 209 g----naiaridp~~ 219 (353)
T COG4257 209 G----NAIARIDPFA 219 (353)
T ss_pred c----cceEEccccc
Confidence 2 2477777654
No 463
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=80.82 E-value=52 Score=31.20 Aligned_cols=189 Identities=8% Similarity=0.018 Sum_probs=96.7
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCc-cceeEEecCC-eEEEEEeCCCCCCceEEEEEC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV-TASVEWAGNE-ALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~-~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l 158 (648)
.+...++.-||+|..- -|+++ +|++|++..|..+.+ ...+. ...++-+-|+ +|.- .+....++.+++
T Consensus 19 aV~avryN~dGnY~lt----cGsdr-tvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s-----~GgDk~v~vwDV 88 (307)
T KOG0316|consen 19 AVRAVRYNVDGNYCLT----CGSDR-TVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFAS-----CGGDKAVQVWDV 88 (307)
T ss_pred ceEEEEEccCCCEEEE----cCCCc-eEEeecccccceeeeecCCCceeeecccccccccccc-----CCCCceEEEEEc
Confidence 4567899999998542 25544 799999988876542 11121 2235556677 6643 234456888999
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC-ceeE-eeecccceeeeEeecCCEEEEE
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRV-LTPRVVGVDTAASHRGNHFFIT 236 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~-l~~~~~~~~~~~s~dg~~l~~~ 236 (648)
.+++ -..-|..+.... ..+.+..+.. +++ +. .-++.+.++|..+.. ++.+ +....+++ .++.-.+..|+--
T Consensus 89 ~TGk--v~Rr~rgH~aqV-NtV~fNeesS-Vv~-Sg-sfD~s~r~wDCRS~s~ePiQildea~D~V-~Si~v~~heIvaG 161 (307)
T KOG0316|consen 89 NTGK--VDRRFRGHLAQV-NTVRFNEESS-VVA-SG-SFDSSVRLWDCRSRSFEPIQILDEAKDGV-SSIDVAEHEIVAG 161 (307)
T ss_pred ccCe--eeeeccccccee-eEEEecCcce-EEE-ec-cccceeEEEEcccCCCCccchhhhhcCce-eEEEecccEEEee
Confidence 9983 333444443332 2455555543 333 22 234567777877665 2333 32222332 2333344444332
Q ss_pred eccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCC--EEEEEEecCCeeEEEEEEcCC
Q 006375 237 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPA 299 (648)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~l~v~~~~~ 299 (648)
+. .+.+..+|+..+.. ...-....+..+.+.++ -.+..... +.+++++.++
T Consensus 162 S~-----DGtvRtydiR~G~l----~sDy~g~pit~vs~s~d~nc~La~~l~---stlrLlDk~t 214 (307)
T KOG0316|consen 162 SV-----DGTVRTYDIRKGTL----SSDYFGHPITSVSFSKDGNCSLASSLD---STLRLLDKET 214 (307)
T ss_pred cc-----CCcEEEEEeeccee----ehhhcCCcceeEEecCCCCEEEEeecc---ceeeecccch
Confidence 22 23555666654221 11111222444555444 33333332 4567777663
No 464
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=80.69 E-value=68 Score=32.43 Aligned_cols=194 Identities=9% Similarity=0.012 Sum_probs=97.7
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCee--ec-cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV--GK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 157 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~--~~-~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~ 157 (648)
++..++++-.|++||=.+. ...+.+||.++-..- .. .-+...+.+.+-|-| .|+=... ...+..++
T Consensus 152 sv~di~~~a~Gk~l~tcSs-----Dl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~sr-----D~tik~We 221 (406)
T KOG0295|consen 152 SVFDISFDASGKYLATCSS-----DLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSR-----DNTIKAWE 221 (406)
T ss_pred ceeEEEEecCccEEEecCC-----ccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeeccc-----ccceeEEe
Confidence 4678889999988775433 234777887653211 11 112234568888999 7754332 33477788
Q ss_pred CCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccccee---------e----
Q 006375 158 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD---------T---- 224 (648)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~---------~---- 224 (648)
+.++ .-...|..+ +.|.-.+..+-||..++ ....+..|.++-+.+++-...+...+-.++ +
T Consensus 222 ~~tg--~cv~t~~~h-~ewvr~v~v~~DGti~A---s~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~ 295 (406)
T KOG0295|consen 222 CDTG--YCVKTFPGH-SEWVRMVRVNQDGTIIA---SCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSIS 295 (406)
T ss_pred cccc--eeEEeccCc-hHhEEEEEecCCeeEEE---ecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchh
Confidence 8887 333444433 34655677888986543 223344455555555520001111110011 1
Q ss_pred --eEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCCEEE-EEEecCCeeEEEEEEcCC
Q 006375 225 --AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLA-VYEREGGLQKITTYRLPA 299 (648)
Q Consensus 225 --~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~l~v~~~~~ 299 (648)
.-+.+|.++.+...++ ..+-..|+..+.-.-.+..+..- +.++.+.+.+-| +...+++ .+.+|++..
T Consensus 296 ~at~~~~~~~~l~s~SrD----ktIk~wdv~tg~cL~tL~ghdnw--Vr~~af~p~Gkyi~ScaDDk--tlrvwdl~~ 365 (406)
T KOG0295|consen 296 EATGSTNGGQVLGSGSRD----KTIKIWDVSTGMCLFTLVGHDNW--VRGVAFSPGGKYILSCADDK--TLRVWDLKN 365 (406)
T ss_pred hccCCCCCccEEEeeccc----ceEEEEeccCCeEEEEEecccce--eeeeEEcCCCeEEEEEecCC--cEEEEEecc
Confidence 0122334454444432 24555666653211114545443 566666544333 3344443 577788874
No 465
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=80.66 E-value=29 Score=36.77 Aligned_cols=93 Identities=17% Similarity=0.185 Sum_probs=51.8
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec--cccCccceeEEecCC-eEEEEEeCCCCCCceEEEEEC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 158 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l 158 (648)
.+..-+|||||.-|.-+ -. ...|.+|.- +|-.+.. ........++|.|++ .++|... .+++.-.|
T Consensus 106 A~~~gRW~~dGtgLlt~-GE----DG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g------~h~~IKpL 173 (737)
T KOG1524|consen 106 AISSGRWSPDGAGLLTA-GE----DGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFCQG------GHISIKPL 173 (737)
T ss_pred hhhhcccCCCCceeeee-cC----CceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEecC------CeEEEeec
Confidence 44567999999876532 22 336777764 4433321 122234569999999 9999753 23555555
Q ss_pred CCCCCCcEEEEeecCCCeEEEEEeCCCCcEE
Q 006375 159 EADQSNDICLYHEKDDIYSLGLQASESKKFL 189 (648)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l 189 (648)
... ....-.. ..++..+.+.|++....|
T Consensus 174 ~~n--~k~i~Wk-AHDGiiL~~~W~~~s~lI 201 (737)
T KOG1524|consen 174 AAN--SKIIRWR-AHDGLVLSLSWSTQSNII 201 (737)
T ss_pred ccc--cceeEEe-ccCcEEEEeecCccccce
Confidence 443 1122222 223455566666665444
No 466
>PLN00413 triacylglycerol lipase
Probab=79.28 E-value=3.2 Score=43.69 Aligned_cols=38 Identities=16% Similarity=0.264 Sum_probs=28.1
Q ss_pred cHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHh
Q 006375 465 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 504 (648)
Q Consensus 465 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 504 (648)
.+..+...++.+.++. ...+|.++|||+||.+|..++.
T Consensus 266 ayy~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 266 AYYTILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred hHHHHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHH
Confidence 3456677777766653 2468999999999999977664
No 467
>PLN02753 triacylglycerol lipase
Probab=79.09 E-value=2.9 Score=44.47 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=30.6
Q ss_pred CcHhHHHHHHHHHHHcCCCC---CCeEEEEeeChhHHHHHHHHh
Q 006375 464 NTFTDFIACAEYLIKNCYCT---KEKLCIEGRSAGGLLIGAVLN 504 (648)
Q Consensus 464 ~~~~D~~~~~~~l~~~~~~d---~~~i~i~G~S~GG~l~~~~~~ 504 (648)
...+++.+.++.|+++...+ ..+|.++|||+||.||..+|.
T Consensus 288 S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 288 SAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred hHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 34567778888887654221 469999999999999877764
No 468
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=77.79 E-value=71 Score=31.03 Aligned_cols=112 Identities=9% Similarity=0.141 Sum_probs=59.2
Q ss_pred cceeEEecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEEC
Q 006375 128 TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV 206 (648)
Q Consensus 128 ~~~~~WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl 206 (648)
.++++|.||+ +|+.+. +++..|+.+++.+. .-...-+.. ..-.-++.+..++++++. .. ....|+.+++
T Consensus 24 ~SGLTy~pd~~tLfaV~----d~~~~i~els~~G~-vlr~i~l~g--~~D~EgI~y~g~~~~vl~-~E--r~~~L~~~~~ 93 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAVQ----DEPGEIYELSLDGK-VLRRIPLDG--FGDYEGITYLGNGRYVLS-EE--RDQRLYIFTI 93 (248)
T ss_dssp EEEEEEETTTTEEEEEE----TTTTEEEEEETT---EEEEEE-SS---SSEEEEEE-STTEEEEE-ET--TTTEEEEEEE
T ss_pred ccccEEcCCCCeEEEEE----CCCCEEEEEcCCCC-EEEEEeCCC--CCCceeEEEECCCEEEEE-Ec--CCCcEEEEEE
Confidence 4679999998 776554 33567888887543 111122221 122346778888876653 22 2357777777
Q ss_pred CCCC---c---eeEeeec-----cccee-eeEeecCCEEEEEeccCCCCCcEEEEEeC
Q 006375 207 SKPE---E---LRVLTPR-----VVGVD-TAASHRGNHFFITRRSDELFNSELLACPV 252 (648)
Q Consensus 207 ~~~~---~---~~~l~~~-----~~~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 252 (648)
.... . .+.+.-. ..+.+ ..|++.++.|++...+ .+ ..|+.++.
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~--~P-~~l~~~~~ 148 (248)
T PF06977_consen 94 DDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKER--KP-KRLYEVNG 148 (248)
T ss_dssp ----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEES--SS-EEEEEEES
T ss_pred eccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCC--CC-hhhEEEcc
Confidence 3322 1 1122111 11223 4589999999887654 23 46888775
No 469
>PLN02633 palmitoyl protein thioesterase family protein
Probab=77.65 E-value=21 Score=35.61 Aligned_cols=101 Identities=17% Similarity=0.106 Sum_probs=56.6
Q ss_pred CCcEEEEecCCCCCCCCCCCchhHHHHHHC-CCEEEEEccCCCCCCChhhhhcccccCCCCcHhHHHHHHHHHHHcCCCC
Q 006375 405 SDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 483 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 483 (648)
+.|+| +-||-...+..++.....+.+.+. |.-+.++.. |.+ . ++ ..-.+..+.+..+.+.|.+....
T Consensus 25 ~~P~V-iwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~-~-----~~---s~~~~~~~Qve~vce~l~~~~~l- 92 (314)
T PLN02633 25 SVPFI-MLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNG-V-----GD---SWLMPLTQQAEIACEKVKQMKEL- 92 (314)
T ss_pred CCCeE-EecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCC-c-----cc---cceeCHHHHHHHHHHHHhhchhh-
Confidence 46654 458854444444433333344332 666666654 222 1 11 11123445566666666654333
Q ss_pred CCeEEEEeeChhHHHHHHHHhhCCC--ceeEEEecC
Q 006375 484 KEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAAV 517 (648)
Q Consensus 484 ~~~i~i~G~S~GG~l~~~~~~~~p~--~~~a~v~~~ 517 (648)
++-+-++|+|.||.++=+++.+.|+ .++-.|...
T Consensus 93 ~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlg 128 (314)
T PLN02633 93 SQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLA 128 (314)
T ss_pred hCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEec
Confidence 2469999999999988888888776 366666443
No 470
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=77.63 E-value=77 Score=31.31 Aligned_cols=133 Identities=17% Similarity=0.199 Sum_probs=73.8
Q ss_pred CceEEEecccccCCCCcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCc--cceeEEecCCeEEE
Q 006375 64 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV--TASVEWAGNEALVY 141 (648)
Q Consensus 64 ~~~~lld~n~~~~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~--~~~~~WspDg~l~y 141 (648)
+-++.++...... ....++++.||||-+.|- ++...+ ..|.-++.++.-.+..++.+. .-.++|.-+|.++.
T Consensus 71 ~y~~~i~akpi~g--~~~nvS~LTynp~~rtLF-av~n~p---~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi 144 (316)
T COG3204 71 EYRARIDAKPILG--ETANVSSLTYNPDTRTLF-AVTNKP---AAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVI 144 (316)
T ss_pred CceEEEecccccc--ccccccceeeCCCcceEE-EecCCC---ceEEEEecCCceEEEecccccCChhHeEEecCCEEEE
Confidence 3455566443322 233488999999999874 443233 456666665443333333332 23488888885544
Q ss_pred EEeCCCCCCceEEEEECCCCCC----Cc-EEEEeecC--CCeEEEEEeCCCCcEEEEEEccccccEEEEEECC
Q 006375 142 ITMDEILRPDKAWLHKLEADQS----ND-ICLYHEKD--DIYSLGLQASESKKFLFIASESKITRFVFYLDVS 207 (648)
Q Consensus 142 ~~~~~~~~~~~l~~~~l~~~~~----~~-~~~~~~~~--~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~ 207 (648)
+. .+.++++.+.++.+.. .. ...++... ..-+-+++|+|..+.+++ +.++....||.++..
T Consensus 145 ~d----ER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~-aKEr~P~~I~~~~~~ 212 (316)
T COG3204 145 VD----ERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFV-AKERNPIGIFEVTQS 212 (316)
T ss_pred Ee----hhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEE-EEccCCcEEEEEecC
Confidence 42 3445677766654411 11 11111111 123458899998887776 455666788888743
No 471
>PLN02761 lipase class 3 family protein
Probab=77.59 E-value=3.7 Score=43.71 Aligned_cols=40 Identities=15% Similarity=0.106 Sum_probs=29.6
Q ss_pred cHhHHHHHHHHHHHcCC----CCCCeEEEEeeChhHHHHHHHHh
Q 006375 465 TFTDFIACAEYLIKNCY----CTKEKLCIEGRSAGGLLIGAVLN 504 (648)
Q Consensus 465 ~~~D~~~~~~~l~~~~~----~d~~~i~i~G~S~GG~l~~~~~~ 504 (648)
.-+++.+.++.|++... -..-+|.++|||+||.||..++.
T Consensus 270 aR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 270 AREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 45677888888876531 12358999999999999876664
No 472
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=77.22 E-value=74 Score=34.67 Aligned_cols=60 Identities=18% Similarity=0.137 Sum_probs=38.2
Q ss_pred cEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec--ccc--CccceeEEecCC-eEEEEEe
Q 006375 80 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLV--GVTASVEWAGNE-ALVYITM 144 (648)
Q Consensus 80 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~--~~~--~~~~~~~WspDg-~l~y~~~ 144 (648)
+-.+-.+.|-| |+....+.. | ..++++||+++++.+-. -+. +..-++++.|++ -+|.++.
T Consensus 100 ~nAifDl~wap-ge~~lVsas--G--DsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGg 164 (720)
T KOG0321|consen 100 KNAIFDLKWAP-GESLLVSAS--G--DSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGG 164 (720)
T ss_pred cceeEeeccCC-CceeEEEcc--C--CceeeeeeeccceeecceeecccccccchhhhccCCCcceeecc
Confidence 34667889999 777666543 4 36899999998776532 111 123347777777 5555543
No 473
>PLN02310 triacylglycerol lipase
Probab=76.69 E-value=4.1 Score=42.27 Aligned_cols=40 Identities=18% Similarity=0.142 Sum_probs=28.3
Q ss_pred cHhHHHHHHHHHHHcCC--CCCCeEEEEeeChhHHHHHHHHh
Q 006375 465 TFTDFIACAEYLIKNCY--CTKEKLCIEGRSAGGLLIGAVLN 504 (648)
Q Consensus 465 ~~~D~~~~~~~l~~~~~--~d~~~i~i~G~S~GG~l~~~~~~ 504 (648)
..+.+.+.++.|++... -...+|.|+|||+||.||..++.
T Consensus 187 a~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 187 ASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 44667777777775421 12358999999999999877664
No 474
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=76.41 E-value=4.2 Score=42.50 Aligned_cols=77 Identities=17% Similarity=0.191 Sum_probs=45.6
Q ss_pred CchhHHHHHHCCCEEEEEccCCCC--CCChhhhhcccc-cCCCCcHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHH
Q 006375 424 FNSSRLSLLDRGFIFAIAQIRGGG--ELGRQWYENGKF-LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG 500 (648)
Q Consensus 424 ~~~~~~~l~~~G~~v~~~~~rG~g--~~g~~~~~~~~~-~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~ 500 (648)
|...+..++.-||. ||-. +.+-+|+..-.. +.....+..+..-++...+.. ..++|.+++|||||.++.
T Consensus 126 w~~~i~~lv~~GYe------~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~--G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 126 WHELIENLVGIGYE------RGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLN--GGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHhhCcc------cCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHc--CCCceEEEecCCccHHHH
Confidence 44555667777776 2211 233455542111 112234455555555544321 238999999999999999
Q ss_pred HHHhhCCC
Q 006375 501 AVLNMRPD 508 (648)
Q Consensus 501 ~~~~~~p~ 508 (648)
..+...++
T Consensus 198 yFl~w~~~ 205 (473)
T KOG2369|consen 198 YFLKWVEA 205 (473)
T ss_pred HHHhcccc
Confidence 99998876
No 475
>PLN02162 triacylglycerol lipase
Probab=76.11 E-value=4 Score=42.85 Aligned_cols=38 Identities=16% Similarity=0.174 Sum_probs=27.0
Q ss_pred cHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHh
Q 006375 465 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 504 (648)
Q Consensus 465 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 504 (648)
.+..+...++.+..+. ...+|.++|||.||.+|..++.
T Consensus 260 ay~~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 260 AYYTIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred hHHHHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHH
Confidence 4556666666555542 2368999999999999876654
No 476
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=75.93 E-value=51 Score=32.92 Aligned_cols=73 Identities=21% Similarity=0.195 Sum_probs=43.1
Q ss_pred EEEECCCCCeeeccccCccceeEEecCCeEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEE
Q 006375 110 YVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFL 189 (648)
Q Consensus 110 ~v~dl~~g~~~~~~~~~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l 189 (648)
.|+|+.+++.+.+.+.- ..++.|- ||+|++.- ....+|+.++.+++ +.+.+..- +.+.-++.|. |+++
T Consensus 188 ~vidv~s~evl~~GLsm-PhSPRWh-dgrLwvld----sgtGev~~vD~~~G--~~e~Va~v--pG~~rGL~f~--G~ll 255 (335)
T TIGR03032 188 CVIDIPSGEVVASGLSM-PHSPRWY-QGKLWLLN----SGRGELGYVDPQAG--KFQPVAFL--PGFTRGLAFA--GDFA 255 (335)
T ss_pred EEEEeCCCCEEEcCccC-CcCCcEe-CCeEEEEE----CCCCEEEEEcCCCC--cEEEEEEC--CCCCccccee--CCEE
Confidence 56788888876532221 2247785 45666653 23456888888776 33444333 3444456665 8888
Q ss_pred EEEEc
Q 006375 190 FIASE 194 (648)
Q Consensus 190 ~~~~~ 194 (648)
++..+
T Consensus 256 vVgmS 260 (335)
T TIGR03032 256 FVGLS 260 (335)
T ss_pred EEEec
Confidence 87643
No 477
>PLN02934 triacylglycerol lipase
Probab=75.21 E-value=4.4 Score=43.06 Aligned_cols=38 Identities=21% Similarity=0.266 Sum_probs=28.8
Q ss_pred cHhHHHHHHHHHHHcCCCCCCeEEEEeeChhHHHHHHHHh
Q 006375 465 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 504 (648)
Q Consensus 465 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 504 (648)
.+..+...++.+.++.. ..+|.++|||.||.+|..++.
T Consensus 303 Ay~~v~~~lk~ll~~~p--~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 303 AYYAVRSKLKSLLKEHK--NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHHCC--CCeEEEeccccHHHHHHHHHH
Confidence 45667778877776532 368999999999999877664
No 478
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=74.31 E-value=33 Score=33.95 Aligned_cols=103 Identities=13% Similarity=0.176 Sum_probs=60.7
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCC-eee-ccc---cCccceeEEecCC-eEEEEEeCCCCCCceEEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT-PVG-KPL---VGVTASVEWAGNE-ALVYITMDEILRPDKAWL 155 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~-~~~-~~~---~~~~~~~~WspDg-~l~y~~~~~~~~~~~l~~ 155 (648)
.+....|++|+..+|..-. ..+|.|+...+.. ... .++ ......+.|+|.+ +|.-...|+ +.-||-
T Consensus 12 pitchAwn~drt~iAv~~~-----~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~dr---nayVw~ 83 (361)
T KOG1523|consen 12 PITCHAWNSDRTQIAVSPN-----NHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDR---NAYVWT 83 (361)
T ss_pred ceeeeeecCCCceEEeccC-----CceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCC---Cccccc
Confidence 4567799999999998754 3467777766655 221 122 2234569999999 986555433 333443
Q ss_pred EECCCCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEc
Q 006375 156 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASE 194 (648)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~ 194 (648)
.. .++.=+.++++-+.+. -...+.|+|.+..+++.+.
T Consensus 84 ~~-~~~~WkptlvLlRiNr-AAt~V~WsP~enkFAVgSg 120 (361)
T KOG1523|consen 84 QP-SGGTWKPTLVLLRINR-AATCVKWSPKENKFAVGSG 120 (361)
T ss_pred cC-CCCeeccceeEEEecc-ceeeEeecCcCceEEeccC
Confidence 22 2221123344433332 2346799999888876544
No 479
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=74.24 E-value=81 Score=29.93 Aligned_cols=136 Identities=13% Similarity=0.142 Sum_probs=68.5
Q ss_pred EEEEEECCCCCeeec-ccc-CccceeE-EecCC-eEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeC
Q 006375 108 TVYVIDIETGTPVGK-PLV-GVTASVE-WAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQAS 183 (648)
Q Consensus 108 ~l~v~dl~~g~~~~~-~~~-~~~~~~~-WspDg-~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s 183 (648)
+|..+|+++|+.+-. .+. .....+. -.+++ .++... ....|+.+++.++. ..--++... .....+ .
T Consensus 4 ~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~-----~~~~l~~~d~~tG~--~~W~~~~~~-~~~~~~--~ 73 (238)
T PF13360_consen 4 TLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVAS-----GDGNLYALDAKTGK--VLWRFDLPG-PISGAP--V 73 (238)
T ss_dssp EEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEE-----TTSEEEEEETTTSE--EEEEEECSS-CGGSGE--E
T ss_pred EEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEc-----CCCEEEEEECCCCC--EEEEeeccc-ccccee--e
Confidence 577777777776522 221 1222221 23355 665542 34569999988872 111122111 111112 2
Q ss_pred CCCcEEEEEEccccccEEEEEECCCCC-cee-Eeeecc-cc--eeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCcc
Q 006375 184 ESKKFLFIASESKITRFVFYLDVSKPE-ELR-VLTPRV-VG--VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET 258 (648)
Q Consensus 184 ~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~-~l~~~~-~~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 258 (648)
.++..+++.. ....|+.+|+.+++ .++ ...... .. .......+++.+++.... ..|+.+|+++ +..
T Consensus 74 ~~~~~v~v~~---~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~l~~~d~~t-G~~ 144 (238)
T PF13360_consen 74 VDGGRVYVGT---SDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSS-----GKLVALDPKT-GKL 144 (238)
T ss_dssp EETTEEEEEE---TTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETC-----SEEEEEETTT-TEE
T ss_pred eccccccccc---ceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEecc-----CcEEEEecCC-CcE
Confidence 2333454444 22389999999887 233 121111 11 112244457777777653 5899999887 556
Q ss_pred eeEe
Q 006375 259 TVLI 262 (648)
Q Consensus 259 ~~~~ 262 (648)
.|-.
T Consensus 145 ~w~~ 148 (238)
T PF13360_consen 145 LWKY 148 (238)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6633
No 480
>PLN02719 triacylglycerol lipase
Probab=74.10 E-value=5.1 Score=42.57 Aligned_cols=41 Identities=15% Similarity=0.157 Sum_probs=29.9
Q ss_pred CcHhHHHHHHHHHHHcCCC---CCCeEEEEeeChhHHHHHHHHh
Q 006375 464 NTFTDFIACAEYLIKNCYC---TKEKLCIEGRSAGGLLIGAVLN 504 (648)
Q Consensus 464 ~~~~D~~~~~~~l~~~~~~---d~~~i~i~G~S~GG~l~~~~~~ 504 (648)
...+++.+.++-|+++..- ...+|.++|||+||.||..+|.
T Consensus 274 SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 274 SAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred hHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 3456777888887765321 2358999999999999877664
No 481
>PRK13613 lipoprotein LpqB; Provisional
Probab=73.61 E-value=1.1e+02 Score=34.02 Aligned_cols=124 Identities=10% Similarity=0.110 Sum_probs=70.3
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec---cccC-ccceeEEecCC-eEEEEEeCCCCCCceEEEE
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVG-VTASVEWAGNE-ALVYITMDEILRPDKAWLH 156 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~---~~~~-~~~~~~WspDg-~l~y~~~~~~~~~~~l~~~ 156 (648)
.+..|+|.++| -+|+.+........+++..- +|+.... .+.+ ....+.-|+|| ++++..... ...+|+.-
T Consensus 410 ~Lt~PS~d~~g--~vWtvd~~~~~~~vl~v~~~-~G~~~~V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~--g~~~v~va 484 (599)
T PRK13613 410 RLTSPSWDGRG--DLWVVDRDPADPRLLWLLQG-DGEPVEVRTPELDGHRVVAVRVARDGVRVALIVEKD--GRRSLQIG 484 (599)
T ss_pred cccCCcCcCCC--CEEEecCCCCCceEEEEEcC-CCcEEEeeccccCCCEeEEEEECCCccEEEEEEecC--CCcEEEEE
Confidence 57789999998 36777643222233666654 5555322 1223 34568899999 998876532 22345543
Q ss_pred ECCCCCCCcEEEEe--e--cCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 157 KLEADQSNDICLYH--E--KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 157 ~l~~~~~~~~~~~~--~--~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
.+..+......+-. + ..-.-..++.|..++..+++.....+...+|++.+++..
T Consensus 485 ~V~R~~~G~~~l~~~~~l~~~l~~v~~~~W~~~~sL~Vlg~~~~~~~~v~~v~vdG~~ 542 (599)
T PRK13613 485 RIVRDAKAVVSVEEFRSLAPELEDVTDMSWAGDSQLVVLGREEGGVQQARYVQVDGST 542 (599)
T ss_pred EEEeCCCCcEEeeccEEeccCCCccceeEEcCCCEEEEEeccCCCCcceEEEecCCcC
Confidence 33222111222211 0 011114578899999866655444456789999998765
No 482
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=73.49 E-value=13 Score=36.64 Aligned_cols=59 Identities=22% Similarity=0.303 Sum_probs=0.0
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccccCc----cceeEEecCC-eEEEEEe
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV----TASVEWAGNE-ALVYITM 144 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~----~~~~~WspDg-~l~y~~~ 144 (648)
.+..++++-+|.+||=.+..+. -|+|+|..+|+.+..--.++ ...++||||+ +|+..+.
T Consensus 183 ~Iacv~Ln~~Gt~vATaStkGT----LIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSd 246 (346)
T KOG2111|consen 183 DIACVALNLQGTLVATASTKGT----LIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSD 246 (346)
T ss_pred ceeEEEEcCCccEEEEeccCcE----EEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcC
No 483
>PRK13615 lipoprotein LpqB; Provisional
Probab=72.36 E-value=36 Score=37.33 Aligned_cols=80 Identities=18% Similarity=0.188 Sum_probs=50.8
Q ss_pred EEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-----cc-cC--ccceeEEecCCeEEEEEeCCCCCCce
Q 006375 81 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-----PL-VG--VTASVEWAGNEALVYITMDEILRPDK 152 (648)
Q Consensus 81 ~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-----~~-~~--~~~~~~WspDg~l~y~~~~~~~~~~~ 152 (648)
-.|..+++|+||-++|...+.+|..+..|-.+--.++.++.. .+ .+ ....++|..|+.|+...... ....+
T Consensus 417 ~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~~P~~L~~~p~~l~~~l~~v~sl~W~~~~~laVl~~~~-~~~~~ 495 (557)
T PRK13615 417 GRVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGVPTSLTTTPLELLASPGTPLDATWVDELDVATLTLAP-DGERQ 495 (557)
T ss_pred CeeEEEEeCCCccEEEEEEecCCCCEEEEEEEEeCCCcceEeeeccEEcccCcCcceeeEEcCCCEEEEEeccC-CCCce
Confidence 368899999999999999876664444443232244422111 11 11 23458999999887776432 34466
Q ss_pred EEEEECCCC
Q 006375 153 AWLHKLEAD 161 (648)
Q Consensus 153 l~~~~l~~~ 161 (648)
++++.++..
T Consensus 496 v~~v~v~g~ 504 (557)
T PRK13615 496 VELHQVGGP 504 (557)
T ss_pred EEEEECCCc
Confidence 888898865
No 484
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=72.18 E-value=1.3e+02 Score=31.27 Aligned_cols=156 Identities=15% Similarity=0.133 Sum_probs=76.4
Q ss_pred EEEEEECCCCCeeec-ccc------------CccceeEEecCCeEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCC
Q 006375 108 TVYVIDIETGTPVGK-PLV------------GVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDD 174 (648)
Q Consensus 108 ~l~v~dl~~g~~~~~-~~~------------~~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~ 174 (648)
.++.+|+++|+.+-. ... .....+.. .++.++.... ...++.+++.++. .+......
T Consensus 201 ~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~-~~~~vy~~~~-----~g~l~a~d~~tG~----~~W~~~~~ 270 (377)
T TIGR03300 201 KLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVV-DGGQVYAVSY-----QGRVAALDLRSGR----VLWKRDAS 270 (377)
T ss_pred EEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEE-ECCEEEEEEc-----CCEEEEEECCCCc----EEEeeccC
Confidence 688889988876521 110 01122222 2335555433 2358888887762 23322211
Q ss_pred CeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEEeccCCCCCcEEEEEeCCC
Q 006375 175 IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDN 254 (648)
Q Consensus 175 ~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 254 (648)
.. ..+ ..++..|++.+ ....|+.+|.++++.......-...........|+.||+.+.. ..|+.++.++
T Consensus 271 ~~-~~p--~~~~~~vyv~~---~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~~~~~-----G~l~~~d~~t 339 (377)
T TIGR03300 271 SY-QGP--AVDDNRLYVTD---ADGVVVALDRRSGSELWKNDELKYRQLTAPAVVGGYLVVGDFE-----GYLHWLSRED 339 (377)
T ss_pred Cc-cCc--eEeCCEEEEEC---CCCeEEEEECCCCcEEEccccccCCccccCEEECCEEEEEeCC-----CEEEEEECCC
Confidence 11 112 22455666543 3467999999888611111110111111222356677765432 4788888876
Q ss_pred CCcceeEecCCCCcccceEEEeCCEEEEEEe
Q 006375 255 TSETTVLIPHRESVKLQDIQLFIDHLAVYER 285 (648)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 285 (648)
++..|..+.............++.+++...
T Consensus 340 -G~~~~~~~~~~~~~~~sp~~~~~~l~v~~~ 369 (377)
T TIGR03300 340 -GSFVARLKTDGSGIASPPVVVGDGLLVQTR 369 (377)
T ss_pred -CCEEEEEEcCCCccccCCEEECCEEEEEeC
Confidence 455564443222123334455666665544
No 485
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=72.08 E-value=1.1e+02 Score=30.34 Aligned_cols=176 Identities=16% Similarity=0.128 Sum_probs=0.0
Q ss_pred CCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeeccc-ceeeeEeecCCEEEEEeccC
Q 006375 162 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSD 240 (648)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~~~~~ 240 (648)
++.+.++..-.-+..+.++.++.+--|++ +..+-|.++|+.+++.++++..-.- +..+.|+-.|++.|.....+
T Consensus 74 ~t~~~l~~~i~~~~l~~Dv~vse~yvyva-----d~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vsGn~aYVadldd 148 (370)
T COG5276 74 QTHDVLLSVINARDLFADVRVSEEYVYVA-----DWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLDD 148 (370)
T ss_pred ccCcceEEEEehhhhhheeEecccEEEEE-----cCCCceEEEeccCCCCcceeccccCCceEEEEEecCCEEEEeeccC
Q ss_pred CCCCcEEEEEeCCCCCccee-EecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecCCCe
Q 006375 241 ELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPV 319 (648)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~ 319 (648)
+ +..+|+.++...+. ---.........+...+++-++..+.+|..-+-+-+.....- -....+....
T Consensus 149 g-----fLivdvsdpssP~lagrya~~~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvl-------i~~~n~g~g~ 216 (370)
T COG5276 149 G-----FLIVDVSDPSSPQLAGRYALPGGDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVL-------IGSYNTGPGT 216 (370)
T ss_pred c-----EEEEECCCCCCceeeeeeccCCCCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeE-------EEEEecCCce
Q ss_pred eeee-----CCCCcccccEEEEEEeeCCCCCEEEEEECCC
Q 006375 320 YSID-----PSESVFSSRILRFHYSSLRTPPSVYDYDMDM 354 (648)
Q Consensus 320 ~~v~-----~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~ 354 (648)
+++. ..-.+.+...+.+-.+.+.+|..+=.|+.++
T Consensus 217 ~sv~vsdnr~y~vvy~egvlivd~s~~ssp~~~gsyet~~ 256 (370)
T COG5276 217 YSVSVSDNRAYLVVYDEGVLIVDVSGPSSPTVFGSYETSN 256 (370)
T ss_pred EEEEecCCeeEEEEcccceEEEecCCCCCceEeeccccCC
No 486
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=71.88 E-value=46 Score=35.65 Aligned_cols=102 Identities=18% Similarity=0.137 Sum_probs=63.2
Q ss_pred CcEEEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeeccc--cCccceeEEec--CC--eEEEEEeCCCCCCce
Q 006375 79 GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAG--NE--ALVYITMDEILRPDK 152 (648)
Q Consensus 79 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~Wsp--Dg--~l~y~~~~~~~~~~~ 152 (648)
+.-.+.+..+||||+.|+.++ .+|.++|+++++.+.... .+....++|.- || .-++.+.....+...
T Consensus 143 ~~~~~~sl~is~D~~~l~~as-------~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~ 215 (541)
T KOG4547|consen 143 QKPLVSSLCISPDGKILLTAS-------RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGIT 215 (541)
T ss_pred CCCccceEEEcCCCCEEEecc-------ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeecccccccee
Confidence 345677899999999988654 389999999999875321 22344566654 34 344555544555666
Q ss_pred EEEEECCCCCCCcEEEEeecCCCeEEEEEeCCCCc
Q 006375 153 AWLHKLEADQSNDICLYHEKDDIYSLGLQASESKK 187 (648)
Q Consensus 153 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~ 187 (648)
+|..+-.....+....+..++.....+-....|+.
T Consensus 216 ~w~v~~~~kkks~~~sl~~~dipv~~ds~~~ed~~ 250 (541)
T KOG4547|consen 216 VWVVEKEDKKKSLSCSLTVPDIPVTSDSGLLEDGT 250 (541)
T ss_pred EEEEEcccccchhheeeccCCCCeEeccccccccc
Confidence 77776644444444556556655544444455555
No 487
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=71.81 E-value=73 Score=36.51 Aligned_cols=129 Identities=12% Similarity=0.201 Sum_probs=66.4
Q ss_pred EEEEEEEECCCCCeeec-cccCccceeEEecCCeE-------EEEEeCCCCCCceEEEEECCCCCCCcEEEEeec-----
Q 006375 106 IYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEAL-------VYITMDEILRPDKAWLHKLEADQSNDICLYHEK----- 172 (648)
Q Consensus 106 ~~~l~v~dl~~g~~~~~-~~~~~~~~~~WspDg~l-------~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~----- 172 (648)
...||-|||+.|+++.. ....-..-..+.|+..+ .|++.+ ...|+++|..-.. ..++....
T Consensus 503 ~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls----~n~lfriDpR~~~--~k~v~~~~k~Y~~ 576 (794)
T PF08553_consen 503 PNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLS----DNSLFRIDPRLSG--NKLVDSQSKQYSS 576 (794)
T ss_pred CCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEEC----CCceEEeccCCCC--Cceeecccccccc
Confidence 45799999999998753 11111101334454211 133332 2348888876542 23332111
Q ss_pred CCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccc--eeeeEeecCCEEEEEeccCCCCCcEEEEE
Q 006375 173 DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASHRGNHFFITRRSDELFNSELLAC 250 (648)
Q Consensus 173 ~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 250 (648)
...|. .++-+.+| +|++.+.. .+|.++|--+.. .+...+..+. ....++.||+||+.++.. -|+++
T Consensus 577 ~~~Fs-~~aTt~~G-~iavgs~~---G~IRLyd~~g~~-AKT~lp~lG~pI~~iDvt~DGkwilaTc~t------yLlLi 644 (794)
T PF08553_consen 577 KNNFS-CFATTEDG-YIAVGSNK---GDIRLYDRLGKR-AKTALPGLGDPIIGIDVTADGKWILATCKT------YLLLI 644 (794)
T ss_pred CCCce-EEEecCCc-eEEEEeCC---CcEEeecccchh-hhhcCCCCCCCeeEEEecCCCcEEEEeecc------eEEEE
Confidence 12232 34567777 55555432 456777743332 2223333222 334589999998777653 35555
Q ss_pred eC
Q 006375 251 PV 252 (648)
Q Consensus 251 ~~ 252 (648)
+.
T Consensus 645 ~t 646 (794)
T PF08553_consen 645 DT 646 (794)
T ss_pred EE
Confidence 53
No 488
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=71.56 E-value=1.3e+02 Score=31.18 Aligned_cols=139 Identities=13% Similarity=0.091 Sum_probs=68.5
Q ss_pred eeEEecCCeEEEEEeCC-----C--CC-CceEEEEECC--CCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEcccccc
Q 006375 130 SVEWAGNEALVYITMDE-----I--LR-PDKAWLHKLE--ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITR 199 (648)
Q Consensus 130 ~~~WspDg~l~y~~~~~-----~--~~-~~~l~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~ 199 (648)
.++|.++|.|+...... . .. ..+|+++.-. ++......+|.+. ...-.++.+.++| |+++. ..
T Consensus 18 ~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~-l~~p~Gi~~~~~G--lyV~~----~~ 90 (367)
T TIGR02604 18 AVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEE-LSMVTGLAVAVGG--VYVAT----PP 90 (367)
T ss_pred eeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecC-CCCccceeEecCC--EEEeC----CC
Confidence 48888888776654321 0 11 1256665432 2222233455433 2233467778888 55542 24
Q ss_pred EEEEE-ECCCCC----ceeEeeecccc---------eeeeEeecCCEEEEEeccCC---------------CCCcEEEEE
Q 006375 200 FVFYL-DVSKPE----ELRVLTPRVVG---------VDTAASHRGNHFFITRRSDE---------------LFNSELLAC 250 (648)
Q Consensus 200 ~l~~~-dl~~~~----~~~~l~~~~~~---------~~~~~s~dg~~l~~~~~~~~---------------~~~~~l~~~ 250 (648)
+|+.+ |.++.. ..+.+...... ....+.||| +||+...... .....++++
T Consensus 91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG-~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~ 169 (367)
T TIGR02604 91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDG-WLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRY 169 (367)
T ss_pred eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCC-CEEEecccCCCceeccCCCccCcccccCceEEEE
Confidence 58777 332210 13334332211 123488887 5887654210 112578888
Q ss_pred eCCCCCcceeEecCCCCcccceEEEeCCE
Q 006375 251 PVDNTSETTVLIPHRESVKLQDIQLFIDH 279 (648)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (648)
+.++ +... ++... -....++.++.+.
T Consensus 170 ~pdg-~~~e-~~a~G-~rnp~Gl~~d~~G 195 (367)
T TIGR02604 170 NPDG-GKLR-VVAHG-FQNPYGHSVDSWG 195 (367)
T ss_pred ecCC-CeEE-EEecC-cCCCccceECCCC
Confidence 8775 2333 34333 2234566666554
No 489
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=71.49 E-value=81 Score=33.96 Aligned_cols=160 Identities=11% Similarity=0.099 Sum_probs=84.1
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeee-----cc---ccCc-----cceeEEecCC-eEEEEEeCCC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-----KP---LVGV-----TASVEWAGNE-ALVYITMDEI 147 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~-----~~---~~~~-----~~~~~WspDg-~l~y~~~~~~ 147 (648)
.+..+.++|-..+||+... ...+-.||..+..... .. .++. ...+.|+.|| .+...+.
T Consensus 177 ~lN~v~in~~hgLla~Gt~-----~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts--- 248 (703)
T KOG2321|consen 177 ELNVVSINEEHGLLACGTE-----DGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTS--- 248 (703)
T ss_pred cceeeeecCccceEEeccc-----CceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeecc---
Confidence 4556788999999987543 3467777776654331 01 1111 3558899999 8877543
Q ss_pred CCCceEEEEECCCCCCCcEEEEeecCCCeEEEEEeCC-CCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeE
Q 006375 148 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAA 226 (648)
Q Consensus 148 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~-Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~ 226 (648)
...+++|||.+. +..++-.....--...+.|-+ |+.-.+++.+. .-+-++|-.+++...-+.+..+-.+.-+
T Consensus 249 --~G~v~iyDLRa~--~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk---~~~kiWd~~~Gk~~asiEpt~~lND~C~ 321 (703)
T KOG2321|consen 249 --TGSVLIYDLRAS--KPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDK---RILKIWDECTGKPMASIEPTSDLNDFCF 321 (703)
T ss_pred --CCcEEEEEcccC--CceeecccCCccceeeecccccCCCceEEecch---HHhhhcccccCCceeeccccCCcCceee
Confidence 345999999886 344443222211122344543 33333333322 2345566666663333333222122234
Q ss_pred eecCCEEEEEeccCCCCCcEEEEEeCCCCCccee
Q 006375 227 SHRGNHFFITRRSDELFNSELLACPVDNTSETTV 260 (648)
Q Consensus 227 s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 260 (648)
-|+++ ++|+.+. +.. -..|.++.=+ ...+|
T Consensus 322 ~p~sG-m~f~Ane-~~~-m~~yyiP~LG-PaPrW 351 (703)
T KOG2321|consen 322 VPGSG-MFFTANE-SSK-MHTYYIPSLG-PAPRW 351 (703)
T ss_pred ecCCc-eEEEecC-CCc-ceeEEccccC-CCchh
Confidence 45555 7788886 333 3444444333 34567
No 490
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=71.44 E-value=80 Score=32.27 Aligned_cols=117 Identities=13% Similarity=0.201 Sum_probs=62.0
Q ss_pred eeEEecCCeEEEEEeCCCCCCceEEEEECCCCCCCcEEEEee-----cCCCeEEEEEeCCC---CcEEEEEEcc------
Q 006375 130 SVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHE-----KDDIYSLGLQASES---KKFLFIASES------ 195 (648)
Q Consensus 130 ~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~s~D---g~~l~~~~~~------ 195 (648)
.++|.|||.++++.. ..+|++++.++. ....+... ....-.++++++|+ ..+|++....
T Consensus 6 ~~a~~pdG~l~v~e~-----~G~i~~~~~~g~--~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~ 78 (331)
T PF07995_consen 6 SMAFLPDGRLLVAER-----SGRIWVVDKDGS--LKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG 78 (331)
T ss_dssp EEEEETTSCEEEEET-----TTEEEEEETTTE--ECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS
T ss_pred EEEEeCCCcEEEEeC-----CceEEEEeCCCc--CcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC
Confidence 489999998866543 346888883332 11222221 12234567888885 3455554332
Q ss_pred ccccEEEEEECCCCC----ceeEeeecc-c-------ceeeeEeecCCEEEEEeccCC---------CCCcEEEEEeCCC
Q 006375 196 KITRFVFYLDVSKPE----ELRVLTPRV-V-------GVDTAASHRGNHFFITRRSDE---------LFNSELLACPVDN 254 (648)
Q Consensus 196 ~~~~~l~~~dl~~~~----~~~~l~~~~-~-------~~~~~~s~dg~~l~~~~~~~~---------~~~~~l~~~~~~~ 254 (648)
...+.|.++.++.+. ..+.|.... . +....+.||| .||+..-... ....+|++++.++
T Consensus 79 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG-~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG 157 (331)
T PF07995_consen 79 DNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDG-KLYVSVGDGGNDDNAQDPNSLRGKILRIDPDG 157 (331)
T ss_dssp SEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTS-EEEEEEB-TTTGGGGCSTTSSTTEEEEEETTS
T ss_pred CcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCC-cEEEEeCCCCCcccccccccccceEEEecccC
Confidence 123577777665541 122222111 1 1234589998 7888765321 2357899998765
No 491
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=71.44 E-value=9.7 Score=38.74 Aligned_cols=85 Identities=8% Similarity=-0.007 Sum_probs=49.4
Q ss_pred EEEEEccCCCCCCChhhhhccccc-CCCCcHhHHHHHHHHHHH-cCCCCCCeEEEEeeChhHHHHHHHHh----hCC---
Q 006375 437 IFAIAQIRGGGELGRQWYENGKFL-KKKNTFTDFIACAEYLIK-NCYCTKEKLCIEGRSAGGLLIGAVLN----MRP--- 507 (648)
Q Consensus 437 ~v~~~~~rG~g~~g~~~~~~~~~~-~~~~~~~D~~~~~~~l~~-~~~~d~~~i~i~G~S~GG~l~~~~~~----~~p--- 507 (648)
.++.+|.+-|.|+.. ....... ......+|+..+++-..+ .+.-....+.|+|.|+||..+-+++. .+.
T Consensus 3 NvLfiDqPvGvGfSy--~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~ 80 (319)
T PLN02213 3 NIIFLDQPVGSGFSY--SKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICC 80 (319)
T ss_pred cEEEecCCCCCCCCC--CCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccccc
Confidence 477888875555532 1111111 111233677666664443 33345678999999999984433332 221
Q ss_pred ---CceeEEEecCCccccc
Q 006375 508 ---DLFKAAVAAVPFVDVL 523 (648)
Q Consensus 508 ---~~~~a~v~~~~~~d~~ 523 (648)
=-++++++..|++|..
T Consensus 81 ~~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 81 EPPINLQGYMLGNPVTYMD 99 (319)
T ss_pred CCceeeeEEEeCCCCCCcc
Confidence 1478999999988754
No 492
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=70.97 E-value=10 Score=25.38 Aligned_cols=31 Identities=32% Similarity=0.605 Sum_probs=23.2
Q ss_pred EEeeEEeCCCC---CEEEEEEeCCCCeEEEEEEEECCCC
Q 006375 82 SVGCFQVSPDN---KLVAYAEDTKGDEIYTVYVIDIETG 117 (648)
Q Consensus 82 ~~~~~~~SPDG---~~la~~~~~~G~e~~~l~v~dl~~g 117 (648)
++..+++||+. .+|||+.+. ..+.|+|+.++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~-----g~vhi~D~R~~ 35 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQ-----GRVHIVDTRSN 35 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccC-----CeEEEEEcccC
Confidence 35678999854 599998763 37899998853
No 493
>PLN03037 lipase class 3 family protein; Provisional
Probab=70.85 E-value=6.4 Score=41.98 Aligned_cols=38 Identities=21% Similarity=0.173 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHcCC--CCCCeEEEEeeChhHHHHHHHHh
Q 006375 467 TDFIACAEYLIKNCY--CTKEKLCIEGRSAGGLLIGAVLN 504 (648)
Q Consensus 467 ~D~~~~~~~l~~~~~--~d~~~i~i~G~S~GG~l~~~~~~ 504 (648)
+.+.+.+..|++... -....|.|+|||+||.||..+|.
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 455566666664321 12357999999999999877664
No 494
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=70.84 E-value=1.1e+02 Score=29.96 Aligned_cols=170 Identities=17% Similarity=0.129 Sum_probs=90.4
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeecccc--C---ccceeEEecCCeEEEEEeCCCCCCceEEEEECC
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV--G---VTASVEWAGNEALVYITMDEILRPDKAWLHKLE 159 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~~~~--~---~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~ 159 (648)
.+.+-|||. ++..|. | .-|.-+|.++.+.+..+++ . .-...+|-++|.++|+.+... .. +.+-.
T Consensus 108 giv~gpdg~--~Witd~-~---~aI~R~dpkt~evt~f~lp~~~a~~nlet~vfD~~G~lWFt~q~G~--yG---rLdPa 176 (353)
T COG4257 108 GIVVGPDGS--AWITDT-G---LAIGRLDPKTLEVTRFPLPLEHADANLETAVFDPWGNLWFTGQIGA--YG---RLDPA 176 (353)
T ss_pred eEEECCCCC--eeEecC-c---ceeEEecCcccceEEeecccccCCCcccceeeCCCccEEEeecccc--ce---ecCcc
Confidence 567889997 466553 2 2577778888876643222 1 123588989998889876321 11 22222
Q ss_pred CCCCCcEEEEeecCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEee-ecc--cce-eeeEeecCCEEEE
Q 006375 160 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRV--VGV-DTAASHRGNHFFI 235 (648)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~-~~~--~~~-~~~~s~dg~~l~~ 235 (648)
.....+|..+...--.++..+|||. +.+.+. ..+-|-++|..++. ...+. +.. .+. ....++.|. +++
T Consensus 177 ---~~~i~vfpaPqG~gpyGi~atpdGs-vwyasl--agnaiaridp~~~~-aev~p~P~~~~~gsRriwsdpig~-~wi 248 (353)
T COG4257 177 ---RNVISVFPAPQGGGPYGICATPDGS-VWYASL--AGNAIARIDPFAGH-AEVVPQPNALKAGSRRIWSDPIGR-AWI 248 (353)
T ss_pred ---cCceeeeccCCCCCCcceEECCCCc-EEEEec--cccceEEcccccCC-cceecCCCcccccccccccCccCc-EEE
Confidence 2345566554332334677899996 344332 23556677766654 22222 221 122 223455554 666
Q ss_pred EeccCCCCCcEEEEEeCCCCCcceeEecCCCCcccceEEEeCC
Q 006375 236 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID 278 (648)
Q Consensus 236 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (648)
++.. +.+|+++|.+...-..|-+|.... ...++.++..
T Consensus 249 ttwg----~g~l~rfdPs~~sW~eypLPgs~a-rpys~rVD~~ 286 (353)
T COG4257 249 TTWG----TGSLHRFDPSVTSWIEYPLPGSKA-RPYSMRVDRH 286 (353)
T ss_pred eccC----CceeeEeCcccccceeeeCCCCCC-CcceeeeccC
Confidence 6543 368999987653322334443322 2344445543
No 495
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=70.23 E-value=1.4e+02 Score=30.96 Aligned_cols=239 Identities=13% Similarity=0.051 Sum_probs=109.2
Q ss_pred EEEEEECCCCCeeec-cccC-ccceeEEecCCeEEEEEeCCCCCCceEEEEECCCCCCCcEEEEeecCCCeE----EEEE
Q 006375 108 TVYVIDIETGTPVGK-PLVG-VTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYS----LGLQ 181 (648)
Q Consensus 108 ~l~v~dl~~g~~~~~-~~~~-~~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~----~~~~ 181 (648)
.|+.+|.++|+.+-. ...+ ....+.. .++.+++... ...|+.+++.++..... +....+... ..+.
T Consensus 116 ~l~ald~~tG~~~W~~~~~~~~~~~p~v-~~~~v~v~~~-----~g~l~a~d~~tG~~~W~--~~~~~~~~~~~~~~sp~ 187 (377)
T TIGR03300 116 EVIALDAEDGKELWRAKLSSEVLSPPLV-ANGLVVVRTN-----DGRLTALDAATGERLWT--YSRVTPALTLRGSASPV 187 (377)
T ss_pred EEEEEECCCCcEeeeeccCceeecCCEE-ECCEEEEECC-----CCeEEEEEcCCCceeeE--EccCCCceeecCCCCCE
Confidence 789999988887632 2222 1221222 1335544322 23488888776622111 111111110 0111
Q ss_pred eCCCCcEEEEEEccccccEEEEEECCCCC-ceeEeeecccc---------eeeeEeecCCEEEEEeccCCCCCcEEEEEe
Q 006375 182 ASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVG---------VDTAASHRGNHFFITRRSDELFNSELLACP 251 (648)
Q Consensus 182 ~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~-~~~~l~~~~~~---------~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 251 (648)
. .++ .+++... ...++.+|+.+++ .++.-.....+ ......-.++.+|+.+.. ..|+.+|
T Consensus 188 ~-~~~-~v~~~~~---~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~-----g~l~a~d 257 (377)
T TIGR03300 188 I-ADG-GVLVGFA---GGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQ-----GRVAALD 257 (377)
T ss_pred E-ECC-EEEEECC---CCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcC-----CEEEEEE
Confidence 1 133 3443222 3468889988876 12111100000 011111235667766543 3699999
Q ss_pred CCCCCcceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCCCCCcccccCCCceeecCCCeeeeeCCCCcccc
Q 006375 252 VDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSS 331 (648)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~~g~~~~~l~~~~~i~~~~~~~~v~~~~~~~~~ 331 (648)
.++ ++..|..+... ...+...++.+++... ...++.++... |..+-.. . .++... .. .+...+
T Consensus 258 ~~t-G~~~W~~~~~~---~~~p~~~~~~vyv~~~---~G~l~~~d~~t-G~~~W~~---~--~~~~~~--~s--sp~i~g 320 (377)
T TIGR03300 258 LRS-GRVLWKRDASS---YQGPAVDDNRLYVTDA---DGVVVALDRRS-GSELWKN---D--ELKYRQ--LT--APAVVG 320 (377)
T ss_pred CCC-CcEEEeeccCC---ccCceEeCCEEEEECC---CCeEEEEECCC-CcEEEcc---c--cccCCc--cc--cCEEEC
Confidence 876 56667544221 2344566777766542 24677777653 2211100 0 111111 11 111234
Q ss_pred cEEEEEEeeCCCCCEEEEEECCCCcEEEEEEeeecC-CCCCC-CcceEEEEEeCCCCe
Q 006375 332 RILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLG-GFDTN-NYFTERKWASASDGT 387 (648)
Q Consensus 332 ~~l~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~s~~g~ 387 (648)
+.+++. + .-+.+|.+|..+|+.. .+. +... .+... .+.-..+.+.+.||.
T Consensus 321 ~~l~~~-~---~~G~l~~~d~~tG~~~-~~~-~~~~~~~~~sp~~~~~~l~v~~~dG~ 372 (377)
T TIGR03300 321 GYLVVG-D---FEGYLHWLSREDGSFV-ARL-KTDGSGIASPPVVVGDGLLVQTRDGD 372 (377)
T ss_pred CEEEEE-e---CCCEEEEEECCCCCEE-EEE-EcCCCccccCCEEECCEEEEEeCCce
Confidence 444433 2 2367999999999842 222 2211 22222 223355777777775
No 496
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=70.18 E-value=40 Score=33.66 Aligned_cols=172 Identities=17% Similarity=0.210 Sum_probs=83.3
Q ss_pred CCeEEEEEEEECCCCCeeeccccCc--cceeEEecCCeEEEEEeCCCCCCceEEEEECCCCCCCcEE---EEeecCCCeE
Q 006375 103 GDEIYTVYVIDIETGTPVGKPLVGV--TASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDIC---LYHEKDDIYS 177 (648)
Q Consensus 103 G~e~~~l~v~dl~~g~~~~~~~~~~--~~~~~WspDg~l~y~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~~~~~~~~ 177 (648)
|+-..+|.|||+.+|+++..-+... ...+.++ +|.+ .+.. .++...||. +.++. +.. ++..+....
T Consensus 253 GSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~-ng~m-vtcS--kDrsiaVWd--m~sps--~it~rrVLvGHrAaV- 323 (499)
T KOG0281|consen 253 GSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS-NGYM-VTCS--KDRSIAVWD--MASPT--DITLRRVLVGHRAAV- 323 (499)
T ss_pred cCCCceEEEEeccCCchhhHHhhhcceeEEEEEe-CCEE-EEec--CCceeEEEe--ccCch--HHHHHHHHhhhhhhe-
Confidence 5556799999999999886433322 2335564 3333 2222 233344554 44431 221 111111111
Q ss_pred EEEEeCCCCcEEEEEEccccccEEEEEECCCCCceeEeeecccceeeeEeecCCEEEEEeccCCCCCcEEEEEeCCCCCc
Q 006375 178 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 257 (648)
Q Consensus 178 ~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 257 (648)
. ...-|.|+|+-.+ ++.-|.+++.++.+=.+.+.....|+... ...+.|.+.... ...|...|.+.+.-
T Consensus 324 -N-vVdfd~kyIVsAS---gDRTikvW~~st~efvRtl~gHkRGIACl--QYr~rlvVSGSS----DntIRlwdi~~G~c 392 (499)
T KOG0281|consen 324 -N-VVDFDDKYIVSAS---GDRTIKVWSTSTCEFVRTLNGHKRGIACL--QYRDRLVVSGSS----DNTIRLWDIECGAC 392 (499)
T ss_pred -e-eeccccceEEEec---CCceEEEEeccceeeehhhhcccccceeh--hccCeEEEecCC----CceEEEEeccccHH
Confidence 1 1233667765333 23457777888876123344444443321 112334443222 23566667765333
Q ss_pred ceeEecCCCCcccceEEEeCCEEEEEEecCCeeEEEEEEcCC
Q 006375 258 TTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 299 (648)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~v~~~~~ 299 (648)
.+ ++...++ .+..+.++.+.++ ...-+| .+.+|++.+
T Consensus 393 LR-vLeGHEe-LvRciRFd~krIV-SGaYDG--kikvWdl~a 429 (499)
T KOG0281|consen 393 LR-VLEGHEE-LVRCIRFDNKRIV-SGAYDG--KIKVWDLQA 429 (499)
T ss_pred HH-HHhchHH-hhhheeecCceee-eccccc--eEEEEeccc
Confidence 33 3333322 3566666666654 433344 577778874
No 497
>PRK13614 lipoprotein LpqB; Provisional
Probab=69.75 E-value=1.1e+02 Score=33.79 Aligned_cols=123 Identities=8% Similarity=0.016 Sum_probs=65.5
Q ss_pred EEeeEEeCCCCCEEEEEEeCCCCeEEEEEEEEC-CCCCe-------ee-ccccCc-cceeEEecCC-eEEEEEeCCCCCC
Q 006375 82 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDI-ETGTP-------VG-KPLVGV-TASVEWAGNE-ALVYITMDEILRP 150 (648)
Q Consensus 82 ~~~~~~~SPDG~~la~~~~~~G~e~~~l~v~dl-~~g~~-------~~-~~~~~~-~~~~~WspDg-~l~y~~~~~~~~~ 150 (648)
.+..|+|+++| -+|+...+.. . +|....- .+++. .. .-+.+. ...+.-|+|| +++.....+. .
T Consensus 384 ~Lt~PS~d~~g--~vWtv~~g~~-~-~vv~~~~~g~~~~~~~~~~~v~~~~l~g~~I~~lrvSrDG~R~Avi~~~~g--~ 457 (573)
T PRK13614 384 TLTRPSFSPQD--WVWTAGPGGN-G-RIVAYRPTGVAEGAQAPTVTLTADWLAGRTVKELRVSREGVRALVISEQNG--K 457 (573)
T ss_pred CccCCcccCCC--CEEEeeCCCC-c-eEEEEecCCCcccccccceeecccccCCCeeEEEEECCCccEEEEEEEeCC--c
Confidence 47789999999 5677664321 2 3333332 22221 11 112222 4568899999 9888765322 2
Q ss_pred ceEEEEECCCCCCCc-EEEEe--e-cCCCeEEEEEeCCCCcEEEEEEccccccEEEEEECCCCC
Q 006375 151 DKAWLHKLEADQSND-ICLYH--E-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 210 (648)
Q Consensus 151 ~~l~~~~l~~~~~~~-~~~~~--~-~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~dl~~~~ 210 (648)
.+|+.-.+..+.... +.+.. + ....-..++.|..|+..++......+...++++.+..+.
T Consensus 458 ~~V~va~V~R~~~G~P~~L~~~~~~~~~~~~~sl~W~~~~sl~V~~~~~~~~~~~~~v~v~~g~ 521 (573)
T PRK13614 458 SRVQVAGIVRNEDGTPRELTAPITLAADSDADTGAWVGDSTVVVTKASATSNVVPELLSVDAGQ 521 (573)
T ss_pred cEEEEEEEEeCCCCCeEEccCceecccCCCcceeEEcCCCEEEEEeccCCCcceEEEEEeCCCC
Confidence 345543322211111 22211 0 001123467899999877766544555678888886554
No 498
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=69.72 E-value=1.3e+02 Score=30.53 Aligned_cols=184 Identities=14% Similarity=0.139 Sum_probs=0.0
Q ss_pred EECCCCCeeeccccCccceeEEecCC-eEEEEEeCCC-CCCceEEEEECCC-----CCCCcEEEEeecCCC---------
Q 006375 112 IDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEI-LRPDKAWLHKLEA-----DQSNDICLYHEKDDI--------- 175 (648)
Q Consensus 112 ~dl~~g~~~~~~~~~~~~~~~WspDg-~l~y~~~~~~-~~~~~l~~~~l~~-----~~~~~~~~~~~~~~~--------- 175 (648)
+.+.++........+-.+++.|.|++ .++.++.+.. ..+.++|...+.. ..........-.++.
T Consensus 6 ~~~~~~~~~~~~~~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~ 85 (326)
T PF13449_consen 6 YTLPSGWEFDGIPFGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGL 85 (326)
T ss_pred EeeccCcccCCCccCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCC
Q ss_pred eEEEEEeCCCCcEEEEEEccccc------cEEEEEECCCCC--------ce-------eEeeecccceeeeEeecCCEEE
Q 006375 176 YSLGLQASESKKFLFIASESKIT------RFVFYLDVSKPE--------EL-------RVLTPRVVGVDTAASHRGNHFF 234 (648)
Q Consensus 176 ~~~~~~~s~Dg~~l~~~~~~~~~------~~l~~~dl~~~~--------~~-------~~l~~~~~~~~~~~s~dg~~l~ 234 (648)
-.-++++.+||.+++ ..... ..|+.++.++.. .. ..+..+..-....++|||+.||
T Consensus 86 D~Egi~~~~~g~~~i---s~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~ 162 (326)
T PF13449_consen 86 DPEGIAVPPDGSFWI---SSEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLF 162 (326)
T ss_pred ChhHeEEecCCCEEE---EeCCccCCCCCCEEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEE
Q ss_pred EEecc----CCCCC-------cEEEEEeCCCCC--cceeEecCC------CCcccceEEEeCC-EEEEEEec-----CCe
Q 006375 235 ITRRS----DELFN-------SELLACPVDNTS--ETTVLIPHR------ESVKLQDIQLFID-HLAVYERE-----GGL 289 (648)
Q Consensus 235 ~~~~~----~~~~~-------~~l~~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~~-~l~~~~~~-----~~~ 289 (648)
..... ++... .+|+.+|....+ ..++.++-. ....+.++.+.++ .+++.++. ...
T Consensus 163 ~~~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~ 242 (326)
T PF13449_consen 163 AAMESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNY 242 (326)
T ss_pred EEECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccce
Q ss_pred eEEEEEEcC
Q 006375 290 QKITTYRLP 298 (648)
Q Consensus 290 ~~l~v~~~~ 298 (648)
.+|+.+++.
T Consensus 243 ~ri~~v~l~ 251 (326)
T PF13449_consen 243 KRIYRVDLS 251 (326)
T ss_pred EEEEEEEcc
No 499
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=68.93 E-value=8.4 Score=39.69 Aligned_cols=107 Identities=24% Similarity=0.210 Sum_probs=74.3
Q ss_pred CCcEEEEecCCCCCCCCCCCchhHHHHHHCCCEEEEEccCCCCCC---ChhhhhcccccCCCCcHhHHHHHHHHHHHcCC
Q 006375 405 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL---GRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 481 (648)
Q Consensus 405 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~rG~g~~---g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 481 (648)
..|+|++.-| |+....+... +...|++ ..-+.+.+|-=+.+ +.+|.. +.-.+...|.-.+++.|+...
T Consensus 62 drPtV~~T~G-Y~~~~~p~r~-Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~----Lti~QAA~D~Hri~~A~K~iY- 132 (448)
T PF05576_consen 62 DRPTVLYTEG-YNVSTSPRRS-EPTQLLD--GNQLSVEHRFFGPSRPEPADWSY----LTIWQAASDQHRIVQAFKPIY- 132 (448)
T ss_pred CCCeEEEecC-cccccCcccc-chhHhhc--cceEEEEEeeccCCCCCCCCccc----ccHhHhhHHHHHHHHHHHhhc-
Confidence 4699999866 7766555443 3444443 45566777754432 234542 333466789999999887643
Q ss_pred CCCCeEEEEeeChhHHHHHHHHhhCCCceeEEEecCCcccc
Q 006375 482 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV 522 (648)
Q Consensus 482 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~~~a~v~~~~~~d~ 522 (648)
+++-.-.|.|=||..+...=.-+|+.+.+.|+.+...|.
T Consensus 133 --~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 133 --PGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPNDV 171 (448)
T ss_pred --cCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccccc
Confidence 578999999999988777777789999999988766553
No 500
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=68.57 E-value=1.3e+02 Score=32.16 Aligned_cols=105 Identities=14% Similarity=0.104 Sum_probs=0.0
Q ss_pred eEEeCCCCCEEEEEEeCCCCeEEEEEEEECCCCCeeec-cccCcc--------ceeEEecCC---------eEEEEEeCC
Q 006375 85 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVT--------ASVEWAGNE---------ALVYITMDE 146 (648)
Q Consensus 85 ~~~~SPDG~~la~~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~--------~~~~WspDg---------~l~y~~~~~ 146 (648)
.+.|.||| .|.++....| +|++++..++..... .++.+. ..++++||= +++|+....
T Consensus 34 ~maflPDG-~llVtER~~G----~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~ 108 (454)
T TIGR03606 34 ALLWGPDN-QLWVTERATG----KILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNG 108 (454)
T ss_pred EEEEcCCC-eEEEEEecCC----EEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCC
Q ss_pred CCC---CceEEEEECCCC---CCCcEEEEeec---CCCeEEEEEeCCCCcEEEEEEcc
Q 006375 147 ILR---PDKAWLHKLEAD---QSNDICLYHEK---DDIYSLGLQASESKKFLFIASES 195 (648)
Q Consensus 147 ~~~---~~~l~~~~l~~~---~~~~~~~~~~~---~~~~~~~~~~s~Dg~~l~~~~~~ 195 (648)
... ...|.++.+... ....+.++... ...+.-.+.+.|||+ |+++..+
T Consensus 109 ~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~-LYVs~GD 165 (454)
T TIGR03606 109 DKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGK-IYYTIGE 165 (454)
T ss_pred CCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCc-EEEEECC
Done!