BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006376
(648 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O54922|EXOC7_RAT Exocyst complex component 7 OS=Rattus norvegicus GN=Exoc7 PE=2 SV=1
Length = 653
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 30/254 (11%)
Query: 401 GGVLHLTKYVMNYLRTLTDYTETLNLLLRNHDKEDPSSAPANMNSALEEESLSGSLTSNF 460
G V LT + +L+ L D+ ET +L + ++ SS+ + NS + LS +
Sbjct: 415 GTVHELTSNAILFLQQLLDFQETAGAMLAS---QETSSSATSYNSEFSKRLLSTYICK-- 469
Query: 461 SPMAIRYRSVTSILESKLHEKSKMYKDVSLQHIFLMNNIHYMAQKVKNSEL-RLIFGDNW 519
V L+ L KSK+Y+D +L IFL NN +Y+ + ++ SEL +L+
Sbjct: 470 ---------VLGNLQLNLLSKSKVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAVTQK 520
Query: 520 IRKHNWK--FQQHAMDYERATWSSI--------LPLLKDDGNSGSSSVSKLKERFKNFYL 569
+ +++ +Q Y+R+ W + LP+ + +KERFK F
Sbjct: 521 TAERSYREHIEQQIQTYQRS-WLKVTDYIAEKNLPVFQPGVKLRDKERQMIKERFKGFND 579
Query: 570 AFEEVYKTQSAWVIPNVHLREDLRISISLKVIQAYRTFESRHKN----QISDKHIKYSAD 625
EE+ K Q AW IP+ R+ +R + V + Y F R+ + + +K+IKY +
Sbjct: 580 GLEELCKIQKAWAIPDTEQRDKIRQAQKSIVKETYGAFLHRYSSVPFTKNPEKYIKYRVE 639
Query: 626 DLQSYLLDLFEGSS 639
+ + LF+ S+
Sbjct: 640 QVGDMIDRLFDTSA 653
>sp|O35250|EXOC7_MOUSE Exocyst complex component 7 OS=Mus musculus GN=Exoc7 PE=1 SV=2
Length = 697
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 119/256 (46%), Gaps = 21/256 (8%)
Query: 401 GGVLHLTKYVMNYLRTLTDYTETLNLLLRNHDKEDPSSAPANMNSALEEESLSGSLTSNF 460
G V LT + +L+ L D+ ET +L + D + P + E S + S +S F
Sbjct: 446 GTVHELTSNAILFLQQLLDFQETAGAMLASQVLGDTYNIPLD---PRETSSSATSYSSEF 502
Query: 461 SP--MAIRYRSVTSILESKLHEKSKMYKDVSLQHIFLMNNIHYMAQKVKNSEL-RLIFGD 517
S ++ V L+ L KSK+Y+D +L IFL NN +Y+ + ++ SEL +L+
Sbjct: 503 SKRLLSTYICKVLGNLQLNLLSKSKVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAVT 562
Query: 518 NWIRKHNWK--FQQHAMDYERATWSSI--------LPLLKDDGNSGSSSVSKLKERFKNF 567
+ +++ +Q Y+R+ W + LP+ + +KERFK F
Sbjct: 563 QKTAERSYREHIEQQIQTYQRS-WLKVTDYIAEKNLPVFQPGVKLRDKERQMIKERFKGF 621
Query: 568 YLAFEEVYKTQSAWVIPNVHLREDLRISISLKVIQAYRTFESRHKN----QISDKHIKYS 623
EE+ K Q W IP+ R+ +R + V + Y F R+ + + +K+IKY
Sbjct: 622 NDGLEELCKIQKVWAIPDTEQRDKIRQAQKDIVKETYGAFLHRYGSVPFTKNPEKYIKYR 681
Query: 624 ADDLQSYLLDLFEGSS 639
+ + + LF+ S+
Sbjct: 682 VEQVGDMIDRLFDTSA 697
>sp|Q9UPT5|EXOC7_HUMAN Exocyst complex component 7 OS=Homo sapiens GN=EXOC7 PE=1 SV=3
Length = 735
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 30/254 (11%)
Query: 401 GGVLHLTKYVMNYLRTLTDYTETLNLLLRNHDKEDPSSAPANMNSALEEESLSGSLTSNF 460
G V LT + +L+ L D+ ET +L +S + ++ S L S +
Sbjct: 497 GTVHELTSNAILFLQQLLDFQETAGAML--------ASQETSSSATSYSSEFSKRLLSTY 548
Query: 461 SPMAIRYRSVTSILESKLHEKSKMYKDVSLQHIFLMNNIHYMAQKVKNSEL-RLIFGDNW 519
V L+ L KSK+Y+D +L IFL NN +Y+ + ++ SEL +L+
Sbjct: 549 ------ICKVLGNLQLNLLSKSKVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAVTQK 602
Query: 520 IRKHNWK--FQQHAMDYERATWSSI--------LPLLKDDGNSGSSSVSKLKERFKNFYL 569
+ +++ +Q Y+R +W + LP+ + +KERFK F
Sbjct: 603 TAERSYREHIEQQIQTYQR-SWLKVTDYIAEKNLPVFQPGVKLRDKERQIIKERFKGFND 661
Query: 570 AFEEVYKTQSAWVIPNVHLREDLRISISLKVIQAY----RTFESRHKNQISDKHIKYSAD 625
EE+ K Q AW IP+ R+ +R + V + Y + F S + +K+IKY +
Sbjct: 662 GLEELCKIQKAWAIPDTEQRDRIRQAQKTIVKETYGAFLQKFGSVPFTKNPEKYIKYGVE 721
Query: 626 DLQSYLLDLFEGSS 639
+ + LF+ S+
Sbjct: 722 QVGDMIDRLFDTSA 735
>sp|Q9VSJ8|EXOC7_DROME Exocyst complex component 7 OS=Drosophila melanogaster GN=exo70
PE=1 SV=2
Length = 693
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 22/199 (11%)
Query: 459 NFSPMAIRYRSVTSILESKLHEKSKMYKDVSLQHIFLMNNIHYMAQKVKNSEL-RLIFGD 517
N + +AI + + L + K + Y D + +H+F +NNIHY+ + ++ S L L+
Sbjct: 499 NKALLAIYIKKALAELNLSIMNKCEQYNDQATKHLFRLNNIHYILKSLQRSNLIDLVTLA 558
Query: 518 NWIRKHNW--KFQQHAMDYERATWSSIL-----------PLLKDDGNSGSSSVSKLKERF 564
+H++ ++ Y++ TWS +L P+ G S LKERF
Sbjct: 559 EPECEHSYMEMIRELKASYQK-TWSKMLVGIYSLDELPKPVA---GKVKDKDRSVLKERF 614
Query: 565 KNFYLAFEEVYKTQSAWVIPNVHLREDLRISISLKVIQAYRTF----ESRHKNQISDKHI 620
NF FEE K Q IP+V LRE ++ ++ Y F H ++ DK++
Sbjct: 615 SNFNKDFEEACKIQRGISIPDVILREGIKRDNVEHILPIYNRFYEIYSGVHFSKNPDKYV 674
Query: 621 KYSADDLQSYLLDLFEGSS 639
KY ++ + L LF+ S+
Sbjct: 675 KYRQHEINAMLSKLFDDSA 693
>sp|Q6CK11|EXO70_KLULA Exocyst complex protein EXO70 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=EXO70 PE=3 SV=1
Length = 619
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 27/284 (9%)
Query: 371 LRRVGDSVRGTFMEFENAIASYTASNPFAGGGVLHLTKYVMNYLRTLTDYTE----TLNL 426
++R+ S+ + N + P + GV T +M+ +R ++Y T+
Sbjct: 335 IQRISHSLFQELFAYINTKTRSMSQLP-SDNGVPEPTVDIMSKIRKFSEYKSGCLSTIQA 393
Query: 427 LLRNH-DKEDPSSAPANMNSALEEESLSGSLTSNFSPMAIRY------RSVTSILESKLH 479
+ R+ +DP + + LE+ S S +L S+F AI Y R L + H
Sbjct: 394 MSRSQWLPKDPKISWTITKNQLEDLS-SANLLSSFFGDAIDYLLFGLERRAQETLNPQ-H 451
Query: 480 E----KSKMYKDVSLQHIFLMNNIHYMAQKVKNSELRLIFGDNWIRKHNWKFQQHAMDYE 535
E +K + ++ FL+NN+ + Q V+ SE+ I G + + ++ ++Y
Sbjct: 452 EIHLLSNKRFPNIQRIGFFLLNNLSLIDQIVQRSEINSILGSAGLARLE-SLRKKYINYY 510
Query: 536 RATWSSILPLLKDD------GNSGSSSVSKLKERFKNFYLAFEEVYKTQSAWVIPNVHLR 589
+ W + +L D G S ++KE+FK F+ FE++ ++ I + L+
Sbjct: 511 VSDWRDLTSILLDQIFVDSSGKVSSKEKDQIKEKFKKFHDGFEDLVSRSKSYRISDPALK 570
Query: 590 EDLRISISLKVIQAYRTFESRHKNQISD--KHIKYSADDLQSYL 631
+ LR I V+ Y F +R+K+ KHIKY+ +L + L
Sbjct: 571 KILRQEILSLVLPMYERFYNRYKDSFKHPRKHIKYTPSELMNVL 614
>sp|P19658|EXO70_YEAST Exocyst complex component EXO70 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=EXO70 PE=1 SV=1
Length = 623
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 494 FLMNNIHYMAQKVKNSELRLIF-GDNWIRKHNWKFQQHAMDYERATWSSILPLLKDD--- 549
F++ N+ + Q V+ SEL L+ G+ R + ++ + Y + W + L D
Sbjct: 475 FILMNLTLVEQIVEKSELNLMLAGEGHSRLE--RLKKRYISYMVSDWRDLTANLMDSVFI 532
Query: 550 GNSGSSSVSK--LKERFKNFYLAFEEVYKTQSAWVIPNVHLREDLRISISLKVIQAYRTF 607
+SG S K +KE+F+ F FE++ + + + L+ L+ I V+ Y F
Sbjct: 533 DSSGKKSKDKEQIKEKFRKFNEGFEDLVSKTKQYKLSDPSLKVTLKSEIISLVMPMYERF 592
Query: 608 ESRHKNQISD--KHIKYSADDLQSYL 631
SR+K+ + KHIKY+ D+L + L
Sbjct: 593 YSRYKDSFKNPRKHIKYTPDELTTVL 618
>sp|Q6FJW2|EXO70_CANGA Exocyst complex protein EXO70 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=EXO70
PE=3 SV=1
Length = 623
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 494 FLMNNIHYMAQKVKNSELRLIFGDNWIRKHNWKFQQHAMDYERATWSSIL-----PLLKD 548
++ N+ + Q V+ SEL ++ G N + K ++ ++Y A W + ++ D
Sbjct: 475 LVLMNMTLVEQIVEKSELSVMLG-NLGKARIEKLKKRYVNYLVADWKDLTVNLMDTVVID 533
Query: 549 DGNSGSSSVSKLKERFKNFYLAFEEVYKTQSAWVIPNVHLREDLRISISLKVIQAYRTFE 608
S ++KE+F+ F FE++ + + + L+ L+ I ++ Y F
Sbjct: 534 SVGKKSKDKEQIKEKFRRFNEGFEDLISRTKQYKLSDPALKRLLKSEIVALLMPMYDRFY 593
Query: 609 SRHKNQISD--KHIKYSADDLQSYL 631
R+K+ + KHIKY+ DD+ + +
Sbjct: 594 GRYKDSFKNPRKHIKYTPDDITNVI 618
>sp|Q754H0|EXO70_ASHGO Exocyst complex protein EXO70 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=EXO70 PE=3
SV=1
Length = 614
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 119/281 (42%), Gaps = 23/281 (8%)
Query: 371 LRRVGDSVRGTFMEFENAIASYTASNPFAGGGVLHLTKYVMNYLRTLTDYTETLNLLLRN 430
L+ + +S+ +++ + A P GV T VM+ LR ++Y +++
Sbjct: 332 LKSISESLFKDLIQYIGQKTASLAQLP-TDNGVTEATVDVMSRLRKFSEYKSGCLATIQS 390
Query: 431 HDKED--PSSAPANMNSALEEESLSGSLTSNFSPMAIRY------RSVTSILESKLH-EK 481
+E P+ + ++ ++ L+ FS AI Y R IL L E
Sbjct: 391 MTRESWLPNESKNVWTISMTPKNAQQLLSCFFSD-AIDYLTISLERKAQKILNPNLEPEV 449
Query: 482 SKMYKDVS-LQHI--FLMNNIHYMAQKVKNSELRLIFGDNWIRKHNWKFQQHAMDYERAT 538
+K + +Q I F++ NI + Q V+ SE+ + D + K ++Y +
Sbjct: 450 GAPHKRIPQMQRIGFFVLTNITLIEQIVQRSEINTVLEDIGAARL-VKLNARYVNYFASD 508
Query: 539 WSSILPLLKDD------GNSGSSSVSKLKERFKNFYLAFEEVYKTQSAWVIPNVHLREDL 592
W + L D G S ++KE+F+ F FE++ I + +++ L
Sbjct: 509 WRDLASNLLDQVFVDSSGKISSKDKDQVKEKFRKFNEGFEQLVSNYKTCRITDPAMKKLL 568
Query: 593 RISISLKVIQAYRTFESRHKNQISD--KHIKYSADDLQSYL 631
+ I V Y F +R+K+ + KHIKY+ ++L + L
Sbjct: 569 KQEIFALVAPMYERFHNRYKDSFKNPRKHIKYTPNELMNIL 609
>sp|Q6CC70|EXO70_YARLI Exocyst complex protein EXO70 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=EXO70 PE=3 SV=1
Length = 603
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 31/254 (12%)
Query: 402 GVLHLTKYVMNYLRTLTDYTETLNLLLRNHDKED------P------SSAPANMNSALEE 449
GV T VM+ +R +Y ++ L + + P SSAPA + +
Sbjct: 358 GVCDATVEVMSRIRRFAEYKDSAVLAISGMKYQQWIPQPRPAWMSTFSSAPAGYTTTKPQ 417
Query: 450 ESLSGSLTSNFSPMAIRYRSVTSILESKLHEKSKMYKDVSLQHIFLMNNIHYMAQKVKNS 509
E LS + + + LE K + + K S FL+ N+ + + V S
Sbjct: 418 ELLSAVFSDSIDAFYV-------TLEMKAKQLNP--KKPSQVGFFLLTNLTLIERFVTKS 468
Query: 510 ELRLIFGDNWIRKHNWKFQQHAMDYERATWSSILPLLKDDG--NSGSSSVSK----LKER 563
E+ + G R+ K ++ ++ W + LL D NS S SK +K++
Sbjct: 469 EVYKVLGGQG-RERLEKLRKRGLNLFLEGWKATASLLMDTTVVNSKGSLSSKDRELVKDK 527
Query: 564 FKNFYLAFEEVYKTQSAWVIPNVHLREDLRISISLKVIQAYRTFESRHKNQIS---DKHI 620
FK F FEE+ K + I + L++ L ++ +R ++ S DK+I
Sbjct: 528 FKTFNADFEELVKNHKTYTITDPALKQLLAKEVAFICPLYHRYYDKHIGGDFSKNVDKYI 587
Query: 621 KYSADDLQSYLLDL 634
KY L +L
Sbjct: 588 KYDKAQFDRVLQEL 601
>sp|Q42694|RUBA_CHLRE RuBisCO large subunit-binding protein subunit alpha, chloroplastic
OS=Chlamydomonas reinhardtii PE=2 SV=1
Length = 580
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 19/163 (11%)
Query: 358 KIGSSVRIEYYEVLRRVGDSVRGTFMEFENAIASYTASNPFAGGGVLHLTKYVMNYLRTL 417
K+G++ E + R+ D+ TF E I P G +LHL++ V + TL
Sbjct: 413 KVGAATEAELEDRKLRIEDAKNATFAAVEEGIV------PGGGAALLHLSELVPAFKETL 466
Query: 418 TDYTETLNLLLRNHDKEDPSSAPANMNSALEEESLSGSLTSNFSPMAIRYRS----VTSI 473
TD E L + P A+ N+ +E E + L P + Y + V ++
Sbjct: 467 TDAEEKLGADIVMKSLRAPCRLIAD-NAGVEGEVIVQRLLGK--PFEVGYNAMIDKVENL 523
Query: 474 LESKLHEKSKMYKD-----VSLQHIFLMNNIHYMAQKVKNSEL 511
L++ + + +K+ ++ VS+ I L M +K K SE+
Sbjct: 524 LDAGVIDPAKVTRNGLLNSVSIAGIMLTTQ-AVMVEKHKPSEI 565
>sp|A9A972|CARA_METM6 Carbamoyl-phosphate synthase small chain OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=carA PE=3
SV=1
Length = 366
Score = 36.6 bits (83), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 18/116 (15%)
Query: 7 IVPEMGEEENLIAAAEHLVRALGSNKNLTSNMKRVLADLGSQLSTMATISDEGVSEIEEQ 66
+VPE+ +E ++ +A+ K VL D G + S + + + G S I+
Sbjct: 152 LVPEVSTKETVVYSADD------------EKTKCVLIDCGVKQSIVNCLVERGCSVIKVP 199
Query: 67 LNIVQEKILSREADQSMIWDSGPDEASEYLNAADEARKLIERLD--GLCLEKNGHE 120
N +E+ILS D ++ +GP + D + LI L G+CL GH+
Sbjct: 200 YNSKKEEILSYTPDFVLV-SNGPGDPENMAETVDTVKNLIGTLPVTGICL---GHQ 251
>sp|A6VHH7|CARA_METM7 Carbamoyl-phosphate synthase small chain OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=carA PE=3
SV=1
Length = 366
Score = 36.2 bits (82), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 7 IVPEMGEEENLIAAAEHLVRALGSNKNLTSNMKRVLADLGSQLSTMATISDEGVSEIEEQ 66
+VPE+ +E + AE+ VL D G + S + + + G S I+
Sbjct: 152 LVPEVSTKETVTYNAEN------------EKTSCVLIDCGVKQSIVNCLVERGCSVIKVP 199
Query: 67 LNIVQEKILSREADQSMIWDSGPDEASEYLNAADEARKLIERLD--GLCLEKNGHE 120
N +E+ILS D ++ +GP + L D + LI L G+CL GH+
Sbjct: 200 YNSKKEEILSYNPDFVLV-SNGPGDPENMLETVDTVKNLIGTLPVTGICL---GHQ 251
>sp|P08823|RUBA_WHEAT RuBisCO large subunit-binding protein subunit alpha, chloroplastic
(Fragment) OS=Triticum aestivum PE=1 SV=1
Length = 543
Score = 35.8 bits (81), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 358 KIGSSVRIEYYEVLRRVGDSVRGTFMEFENAIASYTASNPFAGGGVLHLTKYVMNYLRTL 417
K+G++ E + R+ D+ TF E I P G +HL+ YV T+
Sbjct: 380 KVGATTETELEDRQLRIEDAKNATFAAIEEGIV------PGGGAAYVHLSTYVPAIKETI 433
Query: 418 TDYTETLNLLLRNHDKEDPSSAPANMNSALEEE 450
D+ E L + + P+S AN N+ +E E
Sbjct: 434 EDHDERLGADIIQKALQAPASLIAN-NAGVEGE 465
>sp|Q4X0X6|EXO70_ASPFU Exocyst complex protein exo70 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=exo70
PE=3 SV=1
Length = 628
Score = 35.8 bits (81), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 50/304 (16%)
Query: 367 YYEVLRRVGDSVRGTFMEFENAIASYTASNPF--AGGGVLHLTKYVMNYLRTLTDYTETL 424
+ E LR V ++ + + E AS P GG + L VM+ L TLT Y+ L
Sbjct: 338 FIEALRPVRETAKSSLSELLEETKRKAASIPVLPPDGGSVPLVNEVMSSLTTLTGYSGPL 397
Query: 425 NLLLRN-HDKEDPSSAPANMNSALEEESLSGSLTSNFSPMAIRYRSVTSILESKLHEKSK 483
+L + D S+A A+ + L+ S +L S+F + L S L + +
Sbjct: 398 ASILTSLGDGNWRSTANASGTAPLDVSPDSSALLSHF------ILDMIEALMSSLEARGR 451
Query: 484 -MYKDVSLQHIFLMNNIHYMAQKVKNS-ELRLIFG--------DNWIRKHN------WK- 526
+++ ++Q +FL N + + ++ S EL G D + ++ WK
Sbjct: 452 ALHRSKAVQGVFLSNVFCIVDRAIRQSPELARHLGTPDSIARIDTFRKRATSTYLDAWKE 511
Query: 527 FQQHAMDYERATWSSILPLLKDDGNSGSSSVSK---------LKERFKNFYLAFEEVYKT 577
Q+ +D + + + P G SS++ K +K++FK F +F+E+
Sbjct: 512 TSQYLLDVQYTSRAGARP--ASGGIVDSSAIVKSLSSKDKDAIKDKFKAFNASFDELVNR 569
Query: 578 QSAWVIPNVHLREDLRISISLKVIQA-----YRTFESRHK--NQISDKHIKYSADDLQSY 630
A +++ ++R + + +QA Y F R+ ++ K++KY L +
Sbjct: 570 HKA-----LYMEREVR-GVLAREVQAVLEPLYARFWDRYHEIDKGRGKYVKYDKGSLSAQ 623
Query: 631 LLDL 634
L L
Sbjct: 624 LAAL 627
Score = 33.5 bits (75), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 55 ISDEGVSEIEEQLNIVQEKILSREADQSMIWDSGPD--EASEYLNAADEARKLIERLDGL 112
I++ + ++ E + +++ + ++ ++ +I +GP E S+YL A K + L
Sbjct: 63 ITNSNIDKVNEAIERLRQPLDAKNREEGIIR-AGPQSVELSQYLAAMKRVDKALVDLSST 121
Query: 113 CLEKNGHEKELLRKAHDVLQMAMNRLEEEFRHILVQNRQPFEPEH-----MSFRSSEEDI 167
L+ N ++ + + +++L +L++ R IL Q P EP H + F S ++
Sbjct: 122 NLKSN---QKAISEFNNLLSTGNAKLQDMLRGILNQYASPIEPLHYLTKDLPFPSIPQET 178
Query: 168 MDESSIISYGDDS 180
+ E + I DS
Sbjct: 179 ISELTSICAAIDS 191
>sp|A3QAX8|PGK_SHELP Phosphoglycerate kinase OS=Shewanella loihica (strain ATCC BAA-1088
/ PV-4) GN=pgk PE=3 SV=1
Length = 391
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%)
Query: 2 GDIDKIVPEMGEEENLIAAAEHLVRALGSNKNLTSNMKRVLADLGSQLSTMATISDEGVS 61
G +D++V G IAAA H V +L KR++A+ S+ + +D V+
Sbjct: 206 GIVDQLVVGGGIANTFIAAAGHNVGKSLYEADLIDEAKRLVANAQSRGGDIPVPTDVVVA 265
Query: 62 EIEEQLNIVQEKILSREADQSMIWDSGPDEA 92
K + + AD+ MI+D GPD A
Sbjct: 266 SEFSPTASATLKAVDQVADEDMIFDIGPDSA 296
>sp|Q0HM62|PGK_SHESM Phosphoglycerate kinase OS=Shewanella sp. (strain MR-4) GN=pgk PE=3
SV=1
Length = 391
Score = 33.5 bits (75), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%)
Query: 2 GDIDKIVPEMGEEENLIAAAEHLVRALGSNKNLTSNMKRVLADLGSQLSTMATISDEGVS 61
G +D++V G IAAA H V +L KR++A+ S+ + +D V+
Sbjct: 206 GIVDQLVVGGGIANTFIAAAGHNVGKSLYEADLIDEAKRLVANAQSRGGDIPVPTDVVVA 265
Query: 62 EIEEQLNIVQEKILSREADQSMIWDSGPDEA 92
K ++ AD MI+D GPD A
Sbjct: 266 GEFSPTAAATLKAVNEVADSDMIFDIGPDSA 296
>sp|A6UQN4|CARA_METVS Carbamoyl-phosphate synthase small chain OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=carA PE=3 SV=1
Length = 369
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 41 VLADLGSQLSTMATISDEGVSEIEEQLNIVQEKILSREADQSMIWDSGPDEASEYLNAAD 100
V+ D G + S + + + G S ++ + +E+ILS D ++ +GP + + L A+
Sbjct: 174 VVIDCGVKQSILNCLLERGCSVVKVPYDTKEEEILSYNPDFVLV-SNGPGDPEKMLETAN 232
Query: 101 EARKLIERLD--GLCLEKNGHE 120
+ L +L G+CL GH+
Sbjct: 233 TVKNLFGKLPVTGICL---GHQ 251
>sp|Q8EIB1|PGK_SHEON Phosphoglycerate kinase OS=Shewanella oneidensis (strain MR-1)
GN=pgk PE=3 SV=1
Length = 391
Score = 33.1 bits (74), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%)
Query: 2 GDIDKIVPEMGEEENLIAAAEHLVRALGSNKNLTSNMKRVLADLGSQLSTMATISDEGVS 61
G +D++V G IAAA H V +L KR++A+ S+ + +D V+
Sbjct: 206 GIVDQLVVGGGIANTFIAAAGHNVGKSLYEADLIDEAKRLVANAQSRGGDIPVPTDVVVA 265
Query: 62 EIEEQLNIVQEKILSREADQSMIWDSGPDEA 92
K +S D MI+D GPD A
Sbjct: 266 GEFSPTAAATLKAVSDVGDSDMIFDIGPDSA 296
>sp|A3D0U1|PGK_SHEB5 Phosphoglycerate kinase OS=Shewanella baltica (strain OS155 / ATCC
BAA-1091) GN=pgk PE=3 SV=1
Length = 391
Score = 33.1 bits (74), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%)
Query: 2 GDIDKIVPEMGEEENLIAAAEHLVRALGSNKNLTSNMKRVLADLGSQLSTMATISDEGVS 61
G +D++V G IAAA + V +L KR++A+ S+ + + +D V+
Sbjct: 206 GIVDQLVVGGGIANTFIAAAGYNVGKSLYEADLIDEAKRLVANAKSRGADIPVPTDVVVA 265
Query: 62 EIEEQLNIVQEKILSREADQSMIWDSGPDEA 92
+ K +S AD MI+D GPD A
Sbjct: 266 GEFSPIAAATLKSVSEVADGEMIFDIGPDSA 296
>sp|Q558Z9|EXOC7_DICDI Exocyst complex component 7 OS=Dictyostelium discoideum GN=exoc7
PE=3 SV=1
Length = 840
Score = 33.1 bits (74), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 334 LFCILDMYEVLADLLSDIDALYADKIGSSVRIEYYEVLRRVGDSVRGTFMEF----ENAI 389
+F +LD+++ LL D + + G + E ++ + D+ + ++F E I
Sbjct: 502 IFPLLDLFDTFTKLLPDFITAISSRDGKHIS-ELKTQIKHLQDTC-ASLLDFSLDEEKEI 559
Query: 390 ASYTASNPFAGGGVLHLTKYVMNYLRTLTDYTETLNLLLRNHD 432
+S + V ++ ++NY + L +Y ++ LLL+ D
Sbjct: 560 SSSNRKEIISDATVDEISSNMINYFKRLIEYKHSVELLLKGQD 602
>sp|A1RN68|PGK_SHESW Phosphoglycerate kinase OS=Shewanella sp. (strain W3-18-1) GN=pgk
PE=3 SV=1
Length = 391
Score = 32.7 bits (73), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%)
Query: 2 GDIDKIVPEMGEEENLIAAAEHLVRALGSNKNLTSNMKRVLADLGSQLSTMATISDEGVS 61
G +D++V G IAAA H V +L KR++A+ S+ + +D V+
Sbjct: 206 GIVDQLVVGGGIANTFIAAAGHNVGKSLYEADLIDEAKRLVANAQSRGGDIPVPTDVVVA 265
Query: 62 EIEEQLNIVQEKILSREADQSMIWDSGPDEA 92
K +S +D MI+D GPD A
Sbjct: 266 GEFSPTATATLKSVSDVSDSDMIFDIGPDSA 296
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 228,886,653
Number of Sequences: 539616
Number of extensions: 9331092
Number of successful extensions: 28646
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 28562
Number of HSP's gapped (non-prelim): 153
length of query: 648
length of database: 191,569,459
effective HSP length: 124
effective length of query: 524
effective length of database: 124,657,075
effective search space: 65320307300
effective search space used: 65320307300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)