Query 006376
Match_columns 648
No_of_seqs 239 out of 493
Neff 7.4
Searched_HMMs 46136
Date Thu Mar 28 22:23:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006376.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006376hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2344 Exocyst component prot 100.0 1E-112 2E-117 957.8 57.6 599 14-642 6-619 (623)
2 PF03081 Exo70: Exo70 exocyst 100.0 9.5E-77 2.1E-81 643.1 26.7 357 269-634 1-371 (371)
3 PF06419 COG6: Conserved oligo 99.3 5.1E-07 1.1E-11 104.1 48.3 522 15-631 34-618 (618)
4 PF04129 Vps52: Vps52 / Sac2 f 98.6 0.00056 1.2E-08 77.5 38.7 419 20-534 15-507 (508)
5 KOG1961 Vacuolar sorting prote 98.5 0.0021 4.5E-08 71.2 39.0 126 26-152 82-221 (683)
6 KOG3758 Uncharacterized conser 98.1 0.026 5.7E-07 63.0 44.5 463 60-631 122-651 (655)
7 PF09763 Sec3_C: Exocyst compl 97.1 1.1 2.4E-05 53.1 41.1 214 366-609 438-693 (701)
8 KOG2148 Exocyst protein Sec3 [ 92.2 26 0.00057 40.3 36.7 209 367-612 605-839 (867)
9 PF04136 Sec34: Sec34-like fam 91.6 2.3 4.9E-05 40.6 11.1 90 58-150 56-150 (157)
10 PF07393 Sec10: Exocyst comple 87.4 71 0.0015 38.1 27.0 133 208-355 127-275 (710)
11 PF10191 COG7: Golgi complex c 87.1 77 0.0017 38.1 31.7 133 208-357 199-335 (766)
12 KOG1916 Nuclear protein, conta 55.9 61 0.0013 38.9 9.5 102 493-609 961-1065(1283)
13 PRK10807 paraquat-inducible pr 52.4 42 0.00092 38.6 7.7 26 6-31 406-432 (547)
14 KOG3821 Heparin sulfate cell s 49.6 25 0.00054 39.7 5.0 63 560-636 100-168 (563)
15 KOG1062 Vesicle coat complex A 43.2 1.1E+02 0.0025 36.2 9.1 85 342-427 138-231 (866)
16 PHA01746 hypothetical protein 41.6 9.6 0.00021 33.6 0.3 22 604-626 76-97 (131)
17 TIGR02553 SipD_IpaD_SspD type 38.7 1.2E+02 0.0026 32.0 7.7 108 514-635 116-237 (308)
18 PF05659 RPW8: Arabidopsis bro 31.1 2.4E+02 0.0053 26.5 7.9 97 11-112 5-116 (147)
19 KOG0994 Extracellular matrix g 30.8 2.9E+02 0.0063 34.5 9.9 48 90-140 1664-1711(1758)
20 COG2733 Predicted membrane pro 27.5 3.5E+02 0.0077 29.6 9.2 90 530-633 290-383 (415)
21 KOG2047 mRNA splicing factor [ 26.0 72 0.0016 37.0 3.9 39 597-635 137-180 (835)
22 KOG3745 Exocyst subunit - Sec1 25.6 1.2E+03 0.026 27.9 23.5 70 283-355 279-352 (763)
23 PF10732 DUF2524: Protein of u 22.5 2.1E+02 0.0045 24.2 4.9 44 89-132 33-76 (84)
24 PF15335 CAAP1: Caspase activi 22.1 1.1E+02 0.0024 24.6 3.2 23 229-251 5-27 (64)
No 1
>KOG2344 consensus Exocyst component protein and related proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-112 Score=957.76 Aligned_cols=599 Identities=42% Similarity=0.642 Sum_probs=504.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhhhccccCccchhhHHHHHHHHHHHHHhcccCc-----ccccc--
Q 006376 14 EENLIAAAEHLVRALGSNKNLTSNMKRVLADLGSQLSTMATISDEGVSEIEEQLNIVQEKILSREADQ-----SMIWD-- 86 (648)
Q Consensus 14 ~~~~~a~~~~l~~~L~~s~~lt~~~~~~l~~~d~rl~~~~~~~p~~~~nie~~l~~~e~~i~~~~~~~-----~~i~~-- 86 (648)
.++.+....+....+...++.+.+ .+++++. .... ....++.+++.++.++.+|+.+. ..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~s~~~~-----~~~~~~~---~~s~--~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~~i~~~ 75 (623)
T KOG2344|consen 6 MEKRIFSLNSDVLPLSQEKSQAKN-----LNLDASS---NQSE--EKSPKEATIEQAEEIIEKFLTALNLRSSSKIISFL 75 (623)
T ss_pred hhhhhhhhhhcccccccccccccc-----cCCCcch---hhhc--chhHHHhhhhhHHHHHHHHhhhcccchhhhhhhcc
Confidence 344555555666666655555555 4555541 1100 01126788888889999888754 23333
Q ss_pred CChhcHHHHHHHHHHHHHHHHHhhccCcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccCCCcchh
Q 006376 87 SGPDEASEYLNAADEARKLIERLDGLCLEKNGHEKELLRKAHDVLQMAMNRLEEEFRHILVQNRQPFEPEHMSFRSSEED 166 (648)
Q Consensus 87 ~~~~~~~~yL~av~~l~~~~~~l~~~~~~~~~~~~~~l~~~~~Ll~~am~~Le~eF~~lL~~~~~~~~p~~~~~~s~~~~ 166 (648)
.++.++..|+++|++|+.+++++.+.+.. +. .+....++..+++.||.+||+||++||..++.+++|...+.++...+
T Consensus 76 ~~~~e~~~~~~~v~~l~~~l~~l~s~~~~-~~-~~~~~~~~d~l~~~am~~le~EF~~il~~~r~~~~~~~~~~~~~~~~ 153 (623)
T KOG2344|consen 76 ESREEAKNFLSAVNTLQETLQFLVSQNGL-QS-SKLLKAQADSLLQIAMSRLEKEFRQILENNREELDPERLSVRLRSSL 153 (623)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhcCCc-ch-hhhHHHhHHHHHHHHHHHHHHHHHHHHHhcccccchHhhhhcccccc
Confidence 56899999999999999999999977654 11 12344455559999999999999999999999999987766543332
Q ss_pred hcccc--ccccCCCCCcccccccccCCCCCCccccccccCCCCcHHHHHHHHHHHHhCCCchHHHHHHHHhhHHHHHHHH
Q 006376 167 IMDES--SIISYGDDSISIDDSFQRDSVSRTSEEFIVHLVRADVIPDLRCIANLMFLSNYDHECCQAYVMARKDALDECL 244 (648)
Q Consensus 167 ~~~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~Ia~~m~~~g~~~e~~~~Y~~~R~~~l~~sL 244 (648)
...++ +..+.++...+... . ........++.+|++++.+|+.||++|+++||.++|+++|..+|+++++++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~v~~dLk~Ia~~mi~~gy~~eC~~~Y~~vrk~i~~e~l 227 (623)
T KOG2344|consen 154 NSKDEEASLNSDSKYSALSDE--E----SFGDDEIEPDLFPPDVMTDLKAIAQRMIAAGYEKECFKVYKSIRKSILDESL 227 (623)
T ss_pred cccccccccccCccccccccc--c----cccCceeeccCCCchhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 21110 01111111110000 0 0122356688999999999999999999999999999999999999999999
Q ss_pred HhhccccCcHHHhhhhchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 006376 245 FILEMEKLSIEDVLKMEWGHLNSKIKRWVWALKIFVRSYLASEKFLSEQIFGEFEPVNVSCFVEASKASMLQLLNFGEAV 324 (648)
Q Consensus 245 ~~L~~~~~~~e~v~k~~w~~~~~~i~~wi~a~~~~vk~L~~~E~~L~~~vf~~~~~~~~~~F~~i~~~~~~~ll~f~~~v 324 (648)
.+||+++++++++++|+|+.++.+|++|++++++++++||++|+.||++||++..+....||.+|++.++++||+|+++|
T Consensus 228 ~~L~~e~ls~~~vq~~~we~le~~I~~Wi~~~kv~v~~lf~~E~~Lcd~If~~~~~~~~~cF~eI~~~~~~~ll~F~eav 307 (623)
T KOG2344|consen 228 VNLGVEKLSIEDVQRMDWEVLEGKIKKWIKAVKVAVSVLFEGEKKLCDQIFSDLESIVESCFPEIVKEAALQLLSFPEAV 307 (623)
T ss_pred HhcCeeeccHHHHhhccHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhccchhe
Confidence 99999999999999999999999999999999999999999999999999998765332899999999999999999999
Q ss_pred hcCCCCchhhhhhhhHHHHHHhhHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccc
Q 006376 325 SIGPHKPEKLFCILDMYEVLADLLSDIDALYADKIGSSVRIEYYEVLRRVGDSVRGTFMEFENAIASYTASNPFAGGGVL 404 (648)
Q Consensus 325 a~~~~~peklf~lLdm~e~L~~l~p~~~~lf~~~~~~~~~~~~~~~l~~L~~~~~~~f~ef~~~I~~~~s~~~~~dG~Vh 404 (648)
+.++|+|||+|++||||+++.+++|+++.+|++..|.++++++..++++|+++++++|.||++.|+++++++|++|||||
T Consensus 308 a~~kr~pEklf~iLd~y~~i~~l~p~ie~lF~~~~~s~vr~~~~~~~~rL~~~~~~~~~efe~~I~~d~sk~pv~gG~VH 387 (623)
T KOG2344|consen 308 AISKRSPEKLFKLLDLYETIVELRPDIERLFSDASCSEVRSQALSLLKRLGEGVRSIFVEFESAIRKDSSKTPVPGGGVH 387 (623)
T ss_pred eeccCCHHHHHHHHHHHHHHHHHHHHHHHhccCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHhhcHHHHHHHHhcCCCCCCCCCccCCCcchhhhhhcCCCCCCCChHHHHHHHHHHHHHHHHHhhhcc
Q 006376 405 HLTKYVMNYLRTLTDYTETLNLLLRNHDKEDPSSAPANMNSALEEESLSGSLTSNFSPMAIRYRSVTSILESKLHEKSKM 484 (648)
Q Consensus 405 ~lT~~vmnyl~~L~~y~~~L~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~i~~ii~~L~~~Le~Ksk~ 484 (648)
|||+||||||+.|++|+++|.++|...+ |.... +.+ + .......++++.++.|||.+|++||++||+.
T Consensus 388 pLTryvmnyl~~L~dy~~tL~~il~~~~-~~~~~-~~~-------~---~~~~~~~s~l~~~~~~ii~~L~~nLd~Ks~~ 455 (623)
T KOG2344|consen 388 PLTRYVMNYLNFLADYKDTLEQLLMEDP-VDTSL-PKS-------E---SEDESSNSLLAVHIARIILALECNLDTKSKL 455 (623)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccc-ccccc-Ccc-------c---ccccccccHHHHHHHHHHHHHHhhhHHHHhh
Confidence 9999999999999999999999998764 33211 100 0 0112345799999999999999999999999
Q ss_pred ccccccchhhhhhhHHHHHHHhhcchhhhhhchHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccCCCCCCCchhh--hHH
Q 006376 485 YKDVSLQHIFLMNNIHYMAQKVKNSELRLIFGDNWIRKHNWKFQQHAMDYERATWSSILPLLKDDGNSGSSSVSK--LKE 562 (648)
Q Consensus 485 y~d~aL~~iFLmNN~~yI~~~v~~SeL~~lLG~~w~~~~~~~i~~~~~~Y~~~sW~~vl~~L~~~~~~~~~~~~k--iKe 562 (648)
|+|++|+|||||||+|||+++|++++|+.+||++|+++|..+++||++.|++++|++|+++|.+++.+++++.+| +||
T Consensus 456 Y~D~aL~~lFlmNN~~yiv~kvkss~L~~llGd~wl~kh~~~~~qy~~~Y~r~sW~~vl~~L~~~~s~~~~~~~~~~~Ke 535 (623)
T KOG2344|consen 456 YKDPALSYLFLMNNLHYIVQKVKSSELRLLLGDDWLRKHEEKLRQYATSYERESWGKVLSLLTDEGSSSGGKKSKEVLKE 535 (623)
T ss_pred ccchhhHHHHHHhhHHHHHHHHhcchHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCHHHHHH
Confidence 999999999999999999999998899999999999999999999999999999999999999987533334566 999
Q ss_pred HHHHHHHHHHHHHHhccceeccChhHHHHHHHHHHHHHHHHHHHHHHHhccc----cCCCccccCHHHHHHHHhhhhCCC
Q 006376 563 RFKNFYLAFEEVYKTQSAWVIPNVHLREDLRISISLKVIQAYRTFESRHKNQ----ISDKHIKYSADDLQSYLLDLFEGS 638 (648)
Q Consensus 563 kfk~FN~~Fee~~~~Q~~w~VpD~~LR~~Lr~~i~~~ViPaY~~F~~ry~~~----~~~KyiKYtpe~Le~~L~~LFeg~ 638 (648)
||++||++|||+|++|++|+||||+||++||.+|+++|+|+|++||+||+.. .++|||||||+|||++|++||+|+
T Consensus 536 rfk~FN~~FeEv~k~Qs~wvV~D~~Lr~eLk~si~~~v~P~Yr~F~~r~~~~~~~k~~~kyikYtpedlE~~L~dLF~g~ 615 (623)
T KOG2344|consen 536 RFKLFNEQFEEVYKKQSQWVVPDPKLREELKISISEKVVPAYRSFYGRYRNSVSGKNPEKYIKYTPEDLENYLSDLFEGS 615 (623)
T ss_pred HHHHHHHHHHHHHHhhCceecccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcccccCHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999999964 299999999999999999999999
Q ss_pred CCCC
Q 006376 639 SKSL 642 (648)
Q Consensus 639 ~~~~ 642 (648)
+.+.
T Consensus 616 ~~~~ 619 (623)
T KOG2344|consen 616 PSSP 619 (623)
T ss_pred CCCC
Confidence 9433
No 2
>PF03081 Exo70: Exo70 exocyst complex subunit; InterPro: IPR004140 The Exo70 protein forms one subunit of the exocyst complex. First discovered in Saccharomyces cerevisiae [], Exo70 and other exocyst proteins have been observed in several other eukaryotes, including humans. In S. cerevisiae, the exocyst complex is involved in the late stages of exocytosis, and is localized at the tip of the bud, the major site of exocytosis in yeast []. Exo70 interacts with the Rho3 GTPase []. This interaction mediates one of the three known functions of Rho3 in cell polarity: vesicle docking and fusion with the plasma membrane (the other two functions are regulation of actin polarity and transport of exocytic vesicles from the mother cell to the bud) []. In humans, the functions of Exo70 and the exocyst complex are less well characterised: Exo70 is expressed in several tissues and is thought to also be involved in exocytosis [].; GO: 0006887 exocytosis, 0000145 exocyst; PDB: 2PFV_A 2B7M_B 2B1E_A 2PFT_A.
Probab=100.00 E-value=9.5e-77 Score=643.07 Aligned_cols=357 Identities=41% Similarity=0.698 Sum_probs=312.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHHh---cCCCCchhhhhhhhHHHHHH
Q 006376 269 IKRWVWALKIFVRSYLASEKFLSEQIFGEFEPVNVSCFVEASKASMLQLLNFGEAVS---IGPHKPEKLFCILDMYEVLA 345 (648)
Q Consensus 269 i~~wi~a~~~~vk~L~~~E~~L~~~vf~~~~~~~~~~F~~i~~~~~~~ll~f~~~va---~~~~~peklf~lLdm~e~L~ 345 (648)
|.+|+++++.+++.|+++|++||++||+..++.+..||.+++++++..|++|+++|+ ...++|+++|.+||||++|.
T Consensus 1 ~~~wi~~~~~~~~~l~~~E~~L~~~vf~~~~~~~~~~f~~i~~~~~~~ll~~~~~v~~~~~~~~~~~~lf~ll~~~~~l~ 80 (371)
T PF03081_consen 1 IKRWIQAYKVALKKLFQSERRLCDQVFPESSSIADECFAEIAKPPLLQLLNFADAVASVRNSQRSPEKLFELLDMYEALS 80 (371)
T ss_dssp T-SHHHHHHHHHHHHHHHHHHHHHHHSSCCCTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHCCHTCCCCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCChHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999878999999999999999999999999 88899999999999999999
Q ss_pred hhHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCCCCCCcccccHHHHHHHHHHHhhcHHH
Q 006376 346 DLLSDIDALYADKIGSSVRIEYYEVLRRVGDSVRGTFMEFENAIAS--YTASNPFAGGGVLHLTKYVMNYLRTLTDYTET 423 (648)
Q Consensus 346 ~l~p~~~~lf~~~~~~~~~~~~~~~l~~L~~~~~~~f~ef~~~I~~--~~s~~~~~dG~Vh~lT~~vmnyl~~L~~y~~~ 423 (648)
+++|+++.+|.+.++..++.++.+++++|+++++++|.+|.+.|++ ++.+.+|+||+|||+|++|||||+.|++|+++
T Consensus 81 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~e~~~~i~~~~~~~~~~p~dg~Vh~lT~~vm~yl~~L~~y~~~ 160 (371)
T PF03081_consen 81 ELLPDLDSLFSGESCESIRQEFDELLKKLREAIRKILEEFEESIKNDSDSSSSVPSDGGVHPLTSYVMNYLKRLAEYRDT 160 (371)
T ss_dssp HHHCCCHHCTCC-S-HHHHTHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTCGCS-TTS---HHHHHHHHHHHHHHCTHHH
T ss_pred HHhHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 77777889999999999999999999999999
Q ss_pred HHHHHhcCCCC--CCCCCccCCCcchhhhhhcCCCCCCCChHHHHHHHHHHHHHHHHHhhhccccccccchhhhhhhHHH
Q 006376 424 LNLLLRNHDKE--DPSSAPANMNSALEEESLSGSLTSNFSPMAIRYRSVTSILESKLHEKSKMYKDVSLQHIFLMNNIHY 501 (648)
Q Consensus 424 L~~il~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~i~~ii~~L~~~Le~Ksk~y~d~aL~~iFLmNN~~y 501 (648)
|+.+|...++| .+...+....+ +++++.++++.||.++|++|+.||++||+.|+|++|++||||||+||
T Consensus 161 l~~il~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~i~~ii~~L~~~Le~ks~~y~d~~l~~iFLlNN~~y 231 (371)
T PF03081_consen 161 LESILQSDGDGNWLSESGPPSESS---------SSTDSQSSLSSYIADIISALESNLEAKSKSYKDPALRYIFLLNNYHY 231 (371)
T ss_dssp HHHCCCTT-GGGGS-SS--GGGS------------CCHHHHHHHHHHHHHHHHHHHHHHHHCCHCTHHHHHHHHHHHHHH
T ss_pred HHHHHHhccccccccccccccccc---------cccCccchHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 99999987643 22211111000 01235678999999999999999999999999999999999999999
Q ss_pred HHHHhhcchhhhhhchHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccCCC--C-CCCchhh--hHHHHHHHHHHHHHHHH
Q 006376 502 MAQKVKNSELRLIFGDNWIRKHNWKFQQHAMDYERATWSSILPLLKDDGN--S-GSSSVSK--LKERFKNFYLAFEEVYK 576 (648)
Q Consensus 502 I~~~v~~SeL~~lLG~~w~~~~~~~i~~~~~~Y~~~sW~~vl~~L~~~~~--~-~~~~~~k--iKekfk~FN~~Fee~~~ 576 (648)
|.+++++|+|..+||++|++++..++++|++.|++++|+||+++|.+++. + +.++++| +|+||++||++|||+|+
T Consensus 232 I~~~~~~s~l~~~lg~~~~~~~~~~~~~~~~~Y~~~sW~~v~~~L~~~~~~~~~~~~~~~~~~~ke~f~~Fn~~fee~~~ 311 (371)
T PF03081_consen 232 ILKKLKRSELKDLLGDDWEQRLSSKIEQYIKSYLRSSWGPVLSCLSDDSSSSGGKLSSKERELLKEKFKKFNSAFEEIYK 311 (371)
T ss_dssp HHCCCCTSHHHHCCTTCHHHHHHHHHHHHHHHHHCHHHHHHHCTCCHHCC-T-SSS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhcchhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999889999999999532 1 1244566 99999999999999999
Q ss_pred hccceeccChhHHHHHHHHHHHHHHHHHHHHHHHhcccc--CCCccccCHHHHHHHHhhh
Q 006376 577 TQSAWVIPNVHLREDLRISISLKVIQAYRTFESRHKNQI--SDKHIKYSADDLQSYLLDL 634 (648)
Q Consensus 577 ~Q~~w~VpD~~LR~~Lr~~i~~~ViPaY~~F~~ry~~~~--~~KyiKYtpe~Le~~L~~L 634 (648)
.|+.|+||||+||++||++|.++|+|+|++||+||+... ++|||||||++||++|++|
T Consensus 312 ~q~~~~vpD~~LR~~Lr~~i~~~v~p~Y~~F~~~~~~~~~~~~Kyikyt~~~le~~l~~L 371 (371)
T PF03081_consen 312 AQKTWKVPDPELREELRREIKEKVVPAYRRFYERYRNSQFNPEKYIKYTPEDLENMLNEL 371 (371)
T ss_dssp HHTT---S-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSSHCCC-SS-HHHHHHHHHTC
T ss_pred cCcceecCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCccCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999875 6899999999999999986
No 3
>PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation.
Probab=99.27 E-value=5.1e-07 Score=104.12 Aligned_cols=522 Identities=16% Similarity=0.165 Sum_probs=262.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhhhccccC-c---------cchhhHHHHHHHHHHHHHhcccCc--c
Q 006376 15 ENLIAAAEHLVRALGSNKNLTSNMKRVLADLGSQLSTMATIS-D---------EGVSEIEEQLNIVQEKILSREADQ--S 82 (648)
Q Consensus 15 ~~~~a~~~~l~~~L~~s~~lt~~~~~~l~~~d~rl~~~~~~~-p---------~~~~nie~~l~~~e~~i~~~~~~~--~ 82 (648)
..++.+-+.+.+.|.+-.+.=++|..+-+...+++..-.... + .....++.--+.+...+.+|--.. .
T Consensus 34 ~~~L~~f~~v~~~l~~~~~~v~~l~~~~~~~~~~l~~~~~~t~~ll~~~~~L~~~~~~~~~k~~ll~~f~~~f~Ls~~E~ 113 (618)
T PF06419_consen 34 QEFLKEFSPVNRQLKRLQSDVDKLNSSCDQMQDRLSAAKSETSDLLEEASELREQKEELELKKKLLDAFLERFTLSEEEE 113 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 444555555555555555555555555555555554433211 1 222344555566667777777665 4
Q ss_pred ccccCChhcH-HHHHHHHHHHHHHHHHhhcc-CcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccC
Q 006376 83 MIWDSGPDEA-SEYLNAADEARKLIERLDGL-CLEKNGHEKELLRKAHDVLQMAMNRLEEEFRHILVQNRQPFEPEHMSF 160 (648)
Q Consensus 83 ~i~~~~~~~~-~~yL~av~~l~~~~~~l~~~-~~~~~~~~~~~l~~~~~Ll~~am~~Le~eF~~lL~~~~~~~~p~~~~~ 160 (648)
.++.++...+ +.|..|+++++++-+.-+.. ........-+.+..+...++.|..||=. -+..+.+. ++
T Consensus 114 ~~L~~~~~~v~~~FF~~L~r~~~I~~~c~~LL~~~~~~ag~~iM~~~~~~~e~a~erl~~---w~q~e~~~-l~------ 183 (618)
T PF06419_consen 114 DALTSGEEPVDDEFFDALDRVQKIHEDCKILLSTENQRAGLEIMEQMSKYLERAYERLYR---WVQRECRS-LN------ 183 (618)
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhh-hh------
Confidence 4555442233 35999999988877643321 1111111235667777777777777622 22111110 00
Q ss_pred CCcchhhccccccccCCCCCcccccccccCCCCCCccccccccCCCCcHHHHHHHHHHHHhCCCchHHHHHHHHhhHHHH
Q 006376 161 RSSEEDIMDESSIISYGDDSISIDDSFQRDSVSRTSEEFIVHLVRADVIPDLRCIANLMFLSNYDHECCQAYVMARKDAL 240 (648)
Q Consensus 161 ~s~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~Ia~~m~~~g~~~e~~~~Y~~~R~~~l 240 (648)
.+ -+.+++..-..|+.+.++. .+-+.|.+.|+..|+..+
T Consensus 184 -----------------------~~---------------~~~~~~~l~~al~~L~~rp---~lf~~~l~~~~~~R~~~l 222 (618)
T PF06419_consen 184 -----------------------LD---------------NPEVSPLLRRALRYLRERP---VLFNYCLDEFAEARSKAL 222 (618)
T ss_pred -----------------------hc---------------CcccchHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHHH
Confidence 00 0001222223333344432 346899999999998877
Q ss_pred HH-HHHhhccccCcHHHhhhhchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcch-h---hhHH------HH
Q 006376 241 DE-CLFILEMEKLSIEDVLKMEWGHLNSKIKRWVWALKIFVRSYLASEKFLSEQIFGEFEPVN-V---SCFV------EA 309 (648)
Q Consensus 241 ~~-sL~~L~~~~~~~e~v~k~~w~~~~~~i~~wi~a~~~~vk~L~~~E~~L~~~vf~~~~~~~-~---~~F~------~i 309 (648)
.+ .+..|.....+......++-. -..-.+|+--|.+-|.-..++|++++..+|...+.-. . ..|. +.
T Consensus 223 ~~~F~~aLt~g~~~~~~~rPIel~--AhDP~RYvGDmLAwvHq~~a~E~E~l~~Lf~~~~~~~~~~~~~~~~~~~~~~~~ 300 (618)
T PF06419_consen 223 LRRFLDALTRGGPGGSPSRPIELH--AHDPLRYVGDMLAWVHQAIASEREFLESLFKFDEDEIAEGSSSGFDSNPWSEEL 300 (618)
T ss_pred HHHHHHHHcCCCCCCCCCCchhhh--ccChHHHHHHHHHHHHHHhhhHHHHHHHHhcccccccccccccccccccchHHH
Confidence 54 566675433211001111100 0112233333333333345599999999998643110 0 0111 11
Q ss_pred HHHHHHHHHH--------HHHHHhcCCCCch---hhhhhhhHHHHHHhhHHHHHHhhccccchhHHHHHHHHHHHHHHHH
Q 006376 310 SKASMLQLLN--------FGEAVSIGPHKPE---KLFCILDMYEVLADLLSDIDALYADKIGSSVRIEYYEVLRRVGDSV 378 (648)
Q Consensus 310 ~~~~~~~ll~--------f~~~va~~~~~pe---klf~lLdm~e~L~~l~p~~~~lf~~~~~~~~~~~~~~~l~~L~~~~ 378 (648)
....+...+. -.+.|-.+...|- +++.+|..|... |..+.+..+ .+...++.|.+.+
T Consensus 301 ~~~lld~i~~~l~rplk~RvEQvi~se~~~i~~yki~~LL~fY~~~------~~k~i~~~s------~L~~tl~~L~~~a 368 (618)
T PF06419_consen 301 INELLDRILEGLCRPLKIRVEQVISSEEDPITLYKIANLLSFYQMT------FSKLIGEDS------SLIETLKELQDLA 368 (618)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHH------HHHHcCCCc------hHHHHHHHHHHHH
Confidence 1111111111 1122222223332 345555555443 223332221 2444555555555
Q ss_pred HHH----HHHHHHHHHhccCCCCCCCCcccccHHHHHHHHHHHhhcHHHHHHHHhcCCCCCCCCCccCCCcchhhhhhcC
Q 006376 379 RGT----FMEFENAIASYTASNPFAGGGVLHLTKYVMNYLRTLTDYTETLNLLLRNHDKEDPSSAPANMNSALEEESLSG 454 (648)
Q Consensus 379 ~~~----f~ef~~~I~~~~s~~~~~dG~Vh~lT~~vmnyl~~L~~y~~~L~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (648)
.+. +......+.+.....|++|=...+-....++-|+. |+..+.. + . .+.++
T Consensus 369 ~~~f~~~l~~~~~~l~~~~~~~~~~DL~PP~~l~d~l~~L~~----------il~~~~~--s-~--------~~~~~--- 424 (618)
T PF06419_consen 369 QKKFFSSLRDHVAKLLRSAPEPPPADLSPPEWLIDFLSLLRE----------ILDVYDS--S-L--------SPDDD--- 424 (618)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHH----------HHHHhhc--c-c--------CCccc---
Confidence 544 44444555554223345565655554444444433 3333211 0 0 00000
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHhhhccccccccchhhhhhhHHHHHHHhhcchhhhhhchHHHHHHHHHHHHHH---
Q 006376 455 SLTSNFSPMAIRYRSVTSILESKLHEKSKMYKDVSLQHIFLMNNIHYMAQKVKNSELRLIFGDNWIRKHNWKFQQHA--- 531 (648)
Q Consensus 455 ~~~~~~s~l~~~i~~ii~~L~~~Le~Ksk~y~d~aL~~iFLmNN~~yI~~~v~~SeL~~lLG~~w~~~~~~~i~~~~--- 531 (648)
......|...+..+|+-+....+.-|....++.-..||++|+..+|...+..-+.. .+|......+++.+.
T Consensus 425 --~~~~~~~~~Il~~~idpll~~c~~~a~~L~~~~~~~if~iNCl~~i~s~L~~~~~~----~~~~e~L~~~id~~~~~L 498 (618)
T PF06419_consen 425 --RENDNDFKPILDEPIDPLLQMCQKSASPLAPKDDRAIFMINCLDLIQSTLSPFEFT----SERVEELQDQIDAHVDTL 498 (618)
T ss_pred --hhhhhHHHHHHHHHhHHHHHHHHHHhhccCChhhhHHHHHHhHHHHHHHccChHhH----HHHHHHHHHHHHHHHHHH
Confidence 01114578888888998888888888877777667999999999999988753322 144444444444322
Q ss_pred -----HHHH-HhhHHhhhhhhc----cCCC--C--CCCchhh--hHHHHHHHHHHHHHH-HHhccc-eeccChhHHHHHH
Q 006376 532 -----MDYE-RATWSSILPLLK----DDGN--S--GSSSVSK--LKERFKNFYLAFEEV-YKTQSA-WVIPNVHLREDLR 593 (648)
Q Consensus 532 -----~~Y~-~~sW~~vl~~L~----~~~~--~--~~~~~~k--iKekfk~FN~~Fee~-~~~Q~~-w~VpD~~LR~~Lr 593 (648)
...+ +..-.++...+. +... | ..+..+. ++.-..+|+.-+--. .-.|.. -.+.+|.+|+.++
T Consensus 499 v~~Q~~~lL~~sGL~~~~~~l~~i~~~~~~~~pls~~p~~~~~~l~~a~~kld~fL~sa~~d~~~~L~~L~Sp~l~~~I~ 578 (618)
T PF06419_consen 499 VEEQASFLLERSGLGDLYNALNMIFFDYDMYGPLSENPGMDPDSLSNALQKLDDFLPSALTDAQPNLFKLQSPKLRDDIR 578 (618)
T ss_pred HHHHHHHHHHHCCcHHHHHHHHhhccCCcccCCcccCccCCHHHHHHHHHHHHHHHcccchhhhHHHHHhcCHHHHHHHH
Confidence 2222 222334555554 2211 1 1111111 333333333322111 122333 3478999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccccCC--CccccCHHHHHHHH
Q 006376 594 ISISLKVIQAYRTFESRHKNQISD--KHIKYSADDLQSYL 631 (648)
Q Consensus 594 ~~i~~~ViPaY~~F~~ry~~~~~~--KyiKYtpe~Le~~L 631 (648)
......++-+|..||+...+...+ .-..+||++|..+|
T Consensus 579 ~~a~~~f~~~Y~~v~~~v~d~~n~y~sl~~~tpeeI~~LL 618 (618)
T PF06419_consen 579 ERAFERFCKAYEKVYEAVMDPDNGYESLFPRTPEEIRTLL 618 (618)
T ss_pred HHHHHHHHHHHHHHHHHHhChhcccccccCCCHHHHhhcC
Confidence 999999999999999988764311 24678999998754
No 4
>PF04129 Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 Vps52 complexes with Vps53 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [].
Probab=98.59 E-value=0.00056 Score=77.48 Aligned_cols=419 Identities=12% Similarity=0.115 Sum_probs=236.2
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhhhhhhhhccccCc----------cchhhHHHHHHHHHHHHHhcccCc---ccccc
Q 006376 20 AAEHLVRALGSNKNLTSNMKRVLADLGSQLSTMATISD----------EGVSEIEEQLNIVQEKILSREADQ---SMIWD 86 (648)
Q Consensus 20 ~~~~l~~~L~~s~~lt~~~~~~l~~~d~rl~~~~~~~p----------~~~~nie~~l~~~e~~i~~~~~~~---~~i~~ 86 (648)
....+...+...+++=..|...|.+|.+.|+.+..-+. ..-+|-..+.+.+...+..--..+ ..|.+
T Consensus 15 ~~~~Lh~~i~~cd~~L~~le~~L~~Fq~~L~~iS~eI~~LQ~~S~~l~~~L~Nrk~~~~~L~~~i~~i~ipP~lI~~I~~ 94 (508)
T PF04129_consen 15 NFADLHNQIQECDSILESLEEMLSNFQNDLGSISSEIRSLQERSSSLNVKLKNRKAVEEKLSPFIDDIVIPPDLIRSICE 94 (508)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCHHHHHhHhc
Confidence 45567778888888888999999999999999987443 122233333344444444444444 45666
Q ss_pred CChhcHHHHHHHH-HHHHHHHHHhhccCcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccCCCcch
Q 006376 87 SGPDEASEYLNAA-DEARKLIERLDGLCLEKNGHEKELLRKAHDVLQMAMNRLEEEFRHILVQNRQPFEPEHMSFRSSEE 165 (648)
Q Consensus 87 ~~~~~~~~yL~av-~~l~~~~~~l~~~~~~~~~~~~~~l~~~~~Ll~~am~~Le~eF~~lL~~~~~~~~p~~~~~~s~~~ 165 (648)
|+-++ .|+..+ +.+.+...........+.....+....+..|-.+|+.|+-+.|-.-+..-+.|..+..
T Consensus 95 ~~v~e--~~~~~~~~~~~k~~~~~~~~~~~~~~a~~d~~~~Le~L~~ka~~rir~fl~~kI~~lr~~~tn~q-------- 164 (508)
T PF04129_consen 95 GPVNE--QYIEELLELLKKKIFFSKDQSFKDSKAIKDVKPELEKLKNKAVERIRDFLLKKIKSLRKPKTNSQ-------- 164 (508)
T ss_pred CCCCH--HHHHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchH--------
Confidence 65333 566664 4444444443332222222234567788899999999999999888877555431110
Q ss_pred hhccccccccCCCCCcccccccccCCCCCCccccccccCCCCcHHHHHHHHHHHHhCCC--chHHHHHHHHhhHHHH---
Q 006376 166 DIMDESSIISYGDDSISIDDSFQRDSVSRTSEEFIVHLVRADVIPDLRCIANLMFLSNY--DHECCQAYVMARKDAL--- 240 (648)
Q Consensus 166 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~Ia~~m~~~g~--~~e~~~~Y~~~R~~~l--- 240 (648)
+....+-.-+.+...|...+. ..|+.++|++.=+.+.
T Consensus 165 --------------------------------------~iQ~~LLk~~~~~~FL~~~~~~~a~El~~~Yv~tM~~~Y~~~ 206 (508)
T PF04129_consen 165 --------------------------------------IIQQVLLKYKELFQFLKKHSPELAKELRQAYVETMSWYYSSY 206 (508)
T ss_pred --------------------------------------HHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 011133344555556655432 3466666664322222
Q ss_pred -HH---HHHhhccccCc-------------------------------HH---Hhhh--h------ch--------hhhh
Q 006376 241 -DE---CLFILEMEKLS-------------------------------IE---DVLK--M------EW--------GHLN 266 (648)
Q Consensus 241 -~~---sL~~L~~~~~~-------------------------------~e---~v~k--~------~w--------~~~~ 266 (648)
.+ +|..|...... .+ ++.+ . +. -..|
T Consensus 207 F~~Y~~~L~kl~~~~~~~~~dL~g~~~~~~~~~~s~~~~~~~~~~~Fslg~R~~iL~~~~~~p~i~~~~a~~~~~k~~~E 286 (508)
T PF04129_consen 207 FKRYIRSLEKLQLRIIDSKDDLIGVEDSSKGGFFSSKSSLKNRSSVFSLGRRIDILNSELDAPIIVPQIAEDNSQKYPIE 286 (508)
T ss_pred HHHHHHHHHHHHhhcccccccccCCCccccccccCCCcccccchhhhhhhHHHHHHhhcccCCccccchhhcccccCCHH
Confidence 22 23333211000 00 0000 0 00 0134
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhhhhhhHHHHHHh
Q 006376 267 SKIKRWVWALKIFVRSYLASEKFLSEQIFGEFEPVNVSCFVEASKASMLQLLNFGEAVSIGPHKPEKLFCILDMYEVLAD 346 (648)
Q Consensus 267 ~~i~~wi~a~~~~vk~L~~~E~~L~~~vf~~~~~~~~~~F~~i~~~~~~~ll~f~~~va~~~~~peklf~lLdm~e~L~~ 346 (648)
...++|..++--.+- +|+..|.+-|.........+|.+|-.+++..+..|-+...... -+++.+|=|.-....
T Consensus 287 ~iFRS~~~~L~Dn~t----~Ey~F~~~FF~~~~~~~~~if~~If~~t~~~~~~~~~~~l~~~---~D~iglll~Irl~~~ 359 (508)
T PF04129_consen 287 EIFRSLNKALIDNAT----SEYLFISEFFSGSGDAAEDIFNQIFEPTFSLLQEFTEQLLSNS---YDAIGLLLCIRLNQR 359 (508)
T ss_pred HHHHHHHHHHHHhhh----HHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHHcC---CcHHHHHHHHHHHHH
Confidence 455555555544444 8999999999885554667899999888888888887654332 245555555555555
Q ss_pred hHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC-CCCCcccccHHHHHHHHHHHhhcHHHHH
Q 006376 347 LLSDIDALYADKIGSSVRIEYYEVLRRVGDSVRGTFMEFENAIASYTASNP-FAGGGVLHLTKYVMNYLRTLTDYTETLN 425 (648)
Q Consensus 347 l~p~~~~lf~~~~~~~~~~~~~~~l~~L~~~~~~~f~ef~~~I~~~~s~~~-~~dG~Vh~lT~~vmnyl~~L~~y~~~L~ 425 (648)
..-.+. ......+..-+..+...|=-....++..=.+.|++-..+.. .++.++|++|+---.|+. ++-
T Consensus 360 ~~~~~~----~R~ip~ld~y~~~~~~~LWprF~~i~d~nieSlk~~~~~~~~~~~~~PH~itrRyaef~~-------sll 428 (508)
T PF04129_consen 360 YQFEMQ----RRRIPVLDSYLNSLLMLLWPRFQKIMDANIESLKKADPKKLGSIDTRPHYITRRYAEFLS-------SLL 428 (508)
T ss_pred HHHHHH----hCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCccCChHHHHHHHHHHH-------HHH
Confidence 443332 12223344555555556666666677777777876555443 478889998885444433 333
Q ss_pred HHHhcCCCCCCCCCccCCCcchhhhhhcCCCCCCCChHHHHHHHHHHHHHHHHHhhhccccccccchhhhhhhHHHHHHH
Q 006376 426 LLLRNHDKEDPSSAPANMNSALEEESLSGSLTSNFSPMAIRYRSVTSILESKLHEKSKMYKDVSLQHIFLMNNIHYMAQK 505 (648)
Q Consensus 426 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~i~~ii~~L~~~Le~Ksk~y~d~aL~~iFLmNN~~yI~~~ 505 (648)
.+-...+ +. .+...+.++-..++.=|..=|+..+++..+.+||.||+.+|+..
T Consensus 429 ~L~~~~~-------------------------~~--~~~~~l~~L~~~~~~ll~~~s~~~~~~k~~~iFLiNNY~lIl~i 481 (508)
T PF04129_consen 429 KLSSEHP-------------------------DE--QLEPSLNRLRREVEDLLTRLSKEFKDRKEREIFLINNYDLILSI 481 (508)
T ss_pred HHhccCc-------------------------hh--hHHHHHHHHHHHHHHHHHHHHHhcccccccceehHHHHHHHHHH
Confidence 3322110 00 13334444444444444444777888888999999999999999
Q ss_pred hhcchhhhhhchHHHHHHHHHHHHHHHHH
Q 006376 506 VKNSELRLIFGDNWIRKHNWKFQQHAMDY 534 (648)
Q Consensus 506 v~~SeL~~lLG~~w~~~~~~~i~~~~~~Y 534 (648)
+...... .+.+ ...+...++.+...|
T Consensus 482 L~~~~~~--~~~e-~~~~~~~l~~~~~~f 507 (508)
T PF04129_consen 482 LSERTGK--LSKE-QKHFFELLQARTEEF 507 (508)
T ss_pred HHhcccc--chHH-HHHHHHHHHHHHhhc
Confidence 8765322 1111 233445555555444
No 5
>KOG1961 consensus Vacuolar sorting protein VPS52/suppressor of actin Sac2 [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton]
Probab=98.53 E-value=0.0021 Score=71.16 Aligned_cols=126 Identities=17% Similarity=0.237 Sum_probs=79.9
Q ss_pred HHHhhhhhhHHHHHHHHHhhhhhhhhccccCc---cchhhHHHHHH---HHHHHHHhcccC----c---cccccCChhcH
Q 006376 26 RALGSNKNLTSNMKRVLADLGSQLSTMATISD---EGVSEIEEQLN---IVQEKILSREAD----Q---SMIWDSGPDEA 92 (648)
Q Consensus 26 ~~L~~s~~lt~~~~~~l~~~d~rl~~~~~~~p---~~~~nie~~l~---~~e~~i~~~~~~----~---~~i~~~~~~~~ 92 (648)
..+..-+++=.+|...|++|..+|+++..-+. ..++.|...|+ +++..+.++-.. + ..|.+|+ .+=
T Consensus 82 Nqi~~cd~Vl~rme~~L~~FQ~~L~sissDI~~lqekS~~m~~~L~Nrq~v~s~Ls~fVdd~iVpp~lI~~I~~g~-vne 160 (683)
T KOG1961|consen 82 NQIRACDSVLERMETMLSSFQSDLSSISSDIKILQEKSNDMQLRLENRQAVESKLSQFVDDLIVPPELIKTIVDGD-VNE 160 (683)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHHHhccccCCHHHHHHHHcCC-CCc
Confidence 44555667778899999999999998886432 33334443333 455555555443 2 4566775 444
Q ss_pred HHHHHHHHHHHHHHHHhh-ccCcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 006376 93 SEYLNAADEARKLIERLD-GLCLEKNGHEKELLRKAHDVLQMAMNRLEEEFRHILVQNRQP 152 (648)
Q Consensus 93 ~~yL~av~~l~~~~~~l~-~~~~~~~~~~~~~l~~~~~Ll~~am~~Le~eF~~lL~~~~~~ 152 (648)
..|++++++|..=+.... ....++....++...-+..|-.+|+.|.-+..-+-+..-++|
T Consensus 161 ~~f~~~LeeL~~Kl~~v~~dq~~k~a~a~~Dv~~lLdkLR~KAi~kir~~IlqkI~~fRkp 221 (683)
T KOG1961|consen 161 PEFLEALEELSHKLKLVELDQSNKDAKALKDVEPLLDKLRLKAIEKIREFILQKIKAFRKP 221 (683)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 589999999887776554 222222222345666777888899999877666655554444
No 6
>KOG3758 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.15 E-value=0.026 Score=63.05 Aligned_cols=463 Identities=13% Similarity=0.124 Sum_probs=219.0
Q ss_pred hhhHHHHHHHHHHHHHhcccCc-c-ccccCChhcHH-HHHHHHHHHHHHHHHhh---ccCcccCcchHHHHHHHHHHHHH
Q 006376 60 VSEIEEQLNIVQEKILSREADQ-S-MIWDSGPDEAS-EYLNAADEARKLIERLD---GLCLEKNGHEKELLRKAHDVLQM 133 (648)
Q Consensus 60 ~~nie~~l~~~e~~i~~~~~~~-~-~i~~~~~~~~~-~yL~av~~l~~~~~~l~---~~~~~~~~~~~~~l~~~~~Ll~~ 133 (648)
...||...+-|+..+..|--.+ + ..+++. +.++ .|..++++++.+-+.-. ..+...+ +-+.+..++...+.
T Consensus 122 ~~~le~r~kii~~Fl~~fqLs~~E~~~L~~~-g~i~e~FF~vL~rvqeIh~~~~~Ll~~~~~~A--g~eime~M~~~~E~ 198 (655)
T KOG3758|consen 122 AAQLELRKKIINAFLDNFQLSSEELDLLTES-GPIDEDFFKVLDRVQEIHDNCRLLLQTPNQTA--GLEIMEKMALIQEG 198 (655)
T ss_pred HHHHHHHHHHHHHHHHhcccChHHHHHHhcC-CcchHHHHHHHHHHHHHHHHHHHHHhccchhh--HHHHHHHHHHHHHH
Confidence 3466778888888999998877 2 233442 3333 48888888877655322 1111111 12445555555555
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCcccCCCcchhhccccccccCCCCCcccccccccCCCCCCccccccccCCCCcHHHHH
Q 006376 134 AMNRLEEEFRHILVQNRQPFEPEHMSFRSSEEDIMDESSIISYGDDSISIDDSFQRDSVSRTSEEFIVHLVRADVIPDLR 213 (648)
Q Consensus 134 am~~Le~eF~~lL~~~~~~~~p~~~~~~s~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~ 213 (648)
|..|| -+|... - + .+ + . ++ .-.+++-+.|+
T Consensus 199 a~erl-------~r~~qs-~--e---~~-------------~-----l--~~-----------------t~~~E~~~il~ 228 (655)
T KOG3758|consen 199 AYERL-------FRWSQS-S--E---CR-------------N-----L--TG-----------------TDSQEVSPILR 228 (655)
T ss_pred HHHHH-------HHHhhh-H--h---hc-------------C-----C--cc-----------------ccchhhHHHHH
Confidence 55554 333210 0 0 00 0 0 00 01234666666
Q ss_pred HHHHHHHhCCC-chHHHHHHHHhhHHHH-HHHHHhh--cc-ccCc--HHHhhhhchhhhhHHHHHHHHHHHHHHHHHHHH
Q 006376 214 CIANLMFLSNY-DHECCQAYVMARKDAL-DECLFIL--EM-EKLS--IEDVLKMEWGHLNSKIKRWVWALKIFVRSYLAS 286 (648)
Q Consensus 214 ~Ia~~m~~~g~-~~e~~~~Y~~~R~~~l-~~sL~~L--~~-~~~~--~e~v~k~~w~~~~~~i~~wi~a~~~~vk~L~~~ 286 (648)
.-..++...-- -+.|++-|+..|+..| .+.+..| |- ...+ |+ +..-+--.-=+.+-.|++. ..++
T Consensus 229 kA~~~L~~~p~lfk~~ide~~~aR~~~L~~~Fisaltrg~~~~~PrpIe-l~ahDPlRyIGDmLawlHq-------~ia~ 300 (655)
T KOG3758|consen 229 KAFVFLSSRPVLFKYLIDEVGTARSQSLLRQFISALTRGGPGGMPRPIE-LHAHDPLRYIGDMLAWLHQ-------AIAN 300 (655)
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCcc-ccCCChHHHHHHHHHHHHH-------Hhhh
Confidence 66666655432 5789999999998766 5677888 22 1111 21 1111100111335556653 4559
Q ss_pred HHHHHhhhcCCCC-c---------------------chhhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhhhhhhHHHHH
Q 006376 287 EKFLSEQIFGEFE-P---------------------VNVSCFVEASKASMLQLLNFGEAVSIGPHKPEKLFCILDMYEVL 344 (648)
Q Consensus 287 E~~L~~~vf~~~~-~---------------------~~~~~F~~i~~~~~~~ll~f~~~va~~~~~peklf~lLdm~e~L 344 (648)
|+++...+|.... . +-+.|+..+|++.=. =.+.|-..-.++--+|.+-. .|
T Consensus 301 Ekelv~aLfd~~~~d~q~n~~~~en~~~vl~~~dn~lld~i~~gvcrPlkv----RvEqil~~e~~~Iilfki~n---lL 373 (655)
T KOG3758|consen 301 EKELVEALFDFKKEDLQDNISISENLPNVLGGIDNKLLDDILEGVCRPLKV----RVEQILQAEKNAIILFKISN---LL 373 (655)
T ss_pred HHHHHHHHhcchhhhhccCCCchhHhHHHHhchhhhHHHHHHHHhcchhHH----HHHHHHHcCcCceeehhHHH---HH
Confidence 9999999993210 0 001233333332111 11222222233333333222 22
Q ss_pred HhhHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCC-CCCC-CCcccccHHHHHHHHHHHh-hc
Q 006376 345 ADLLSDIDALYADKIGSSVRIEYYEVLRRVGDSVRGTFMEFEN-AIASYTAS-NPFA-GGGVLHLTKYVMNYLRTLT-DY 420 (648)
Q Consensus 345 ~~l~p~~~~lf~~~~~~~~~~~~~~~l~~L~~~~~~~f~ef~~-~I~~~~s~-~~~~-dG~Vh~lT~~vmnyl~~L~-~y 420 (648)
.=-...|..+..+. ..+...++.|.++++..|-...+ .+++-..+ .+|| |=...|-++..||-+.-+. -|
T Consensus 374 ~FY~~~fs~~v~~d------s~l~~~l~~L~d~s~q~~~~~l~~~~~~l~~~~l~p~~DLlPpp~v~~~l~ll~ei~~~~ 447 (655)
T KOG3758|consen 374 KFYRVTFSKLVQDD------SALLNTLKELEDISKQRFIGYLEDHVKKLMRKELSPPSDLLPPPAVREYLNLLVEIFEIY 447 (655)
T ss_pred HHHHHHHHHHhccc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCHHHHHHHHHHHHHHHHh
Confidence 11112233333333 13556677777777776555444 23222222 2333 6666665554444443333 33
Q ss_pred HHHHHHHHhcCCCCCCCCCccCCCcchhhhhhcCCCCCCCChHHHHHHHHHHHHHHHHHhhhccccccccchhhhhhhHH
Q 006376 421 TETLNLLLRNHDKEDPSSAPANMNSALEEESLSGSLTSNFSPMAIRYRSVTSILESKLHEKSKMYKDVSLQHIFLMNNIH 500 (648)
Q Consensus 421 ~~~L~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~i~~ii~~L~~~Le~Ksk~y~d~aL~~iFLmNN~~ 500 (648)
..++. ..++. ..+..-.+++.+.-++..-..+-+.+-. -+|.+. -+||+|..+
T Consensus 448 ~a~~~----~~d~~---------------------~~df~~l~s~vldpilq~c~~sae~~lp-~~d~~~-~if~iNcL~ 500 (655)
T KOG3758|consen 448 EASHT----AEDGE---------------------QLDFKLLLSCVLDPILQMCQKSAEAHLP-TSDKGS-LIFMINCLD 500 (655)
T ss_pred hhhhc----ccccc---------------------ccchHHHHHHHHHHHHHHHHHHHHhcCC-Cccccc-ceehhhhHH
Confidence 33221 11100 0112223455555555544444433311 134332 599999999
Q ss_pred HHHHHhhcchhhhhhchHHHHHHHHHHHHHHHHHH---------HhhHHhhhhhhccCCC--C---CCCchh--hhHHHH
Q 006376 501 YMAQKVKNSELRLIFGDNWIRKHNWKFQQHAMDYE---------RATWSSILPLLKDDGN--S---GSSSVS--KLKERF 564 (648)
Q Consensus 501 yI~~~v~~SeL~~lLG~~w~~~~~~~i~~~~~~Y~---------~~sW~~vl~~L~~~~~--~---~~~~~~--kiKekf 564 (648)
.|.+.+..=+.. +.-......+++.|...-+ +..-+++.+.+..... + ..+.-+ .+++-+
T Consensus 501 ~iks~l~~~e~~----~~~~e~lq~~ie~~~d~L~t~q~s~ll~~~GLs~~~q~~~~~~p~~~~ls~~~~l~s~~~~~~i 576 (655)
T KOG3758|consen 501 LIKSRLARYEFL----DERVEMLQAKIEAYLDTLVTLQVSFLLENTGLSDLYQKFNMITPEDSVLSLDPDLESALLDEAI 576 (655)
T ss_pred HHHhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHhcCcchhhhhccccccHHHHHHHH
Confidence 998887542211 1111122233333322211 1122222222221111 0 001111 144444
Q ss_pred HHHHHHHHHHHHhccce------eccChhHHHHHHHHHHHHHHHHHHHHHHHhcccc-----C-CCccccCHHHHHHHH
Q 006376 565 KNFYLAFEEVYKTQSAW------VIPNVHLREDLRISISLKVIQAYRTFESRHKNQI-----S-DKHIKYSADDLQSYL 631 (648)
Q Consensus 565 k~FN~~Fee~~~~Q~~w------~VpD~~LR~~Lr~~i~~~ViPaY~~F~~ry~~~~-----~-~KyiKYtpe~Le~~L 631 (648)
.+|- .....-..+ .+.-|.+|++++......++-+|.-+|++-.+.. | +--++++|+++...+
T Consensus 577 ~~fd----~~l~~~~~~~lpq~q~l~sp~~r~~i~kr~~~~~~~aY~~i~~al~~~~ngy~dPve~ll~~~~dq~~tll 651 (655)
T KOG3758|consen 577 VKFD----MFLHAPLNLTLPQLQQLTSPMVRDEICKRSAKKFVLAYEIIYKALINPYNGYKDPVESLLHFSPDQVDTLL 651 (655)
T ss_pred HHHH----HHhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCCChHHHHhcCCHHHhcccc
Confidence 3333 212222223 3346888999999999999999999999987653 4 445667777766543
No 7
>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8. This entry represents the subunit Exoc1 (Sec3). Sec3 binds to the C-terminal cytoplasmic domain of GLYT1 (glycine transporter protein 1). Sec3 is the exocyst component that is closest to the plasma membrane docking site and it serves as a spatial landmark in the plasma membrane for incoming secretory vesicles. Sec3 is recruited to the sites of polarised membrane growth through its interaction with Rho1p, a small GTP-binding protein.
Probab=97.07 E-value=1.1 Score=53.12 Aligned_cols=214 Identities=13% Similarity=0.245 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCCCC-CCcccccHHHHHHHHHHHhhcHHHHHHHHhcCCCCCCCCCccC
Q 006376 366 EYYEVLRRVGDSVRGTFMEFENAIASYTA--SNPFA-GGGVLHLTKYVMNYLRTLTDYTETLNLLLRNHDKEDPSSAPAN 442 (648)
Q Consensus 366 ~~~~~l~~L~~~~~~~f~ef~~~I~~~~s--~~~~~-dG~Vh~lT~~vmnyl~~L~~y~~~L~~il~~~~~~~~~~~~~~ 442 (648)
-+..++.++...+++.|..|.+.--..-. +...- -.|| +.|++.+..|-..++.++.....+.
T Consensus 438 fl~~~L~~l~~~~k~~f~~fv~~Qi~~ie~~k~~~k~r~GV-------l~~i~~fp~f~~~~E~~~~~~~~~~------- 503 (701)
T PF09763_consen 438 FLSNLLQKLQVRLKRLFDKFVDEQIKSIEETKVSKKKRKGV-------LPFIKKFPEFVKRVESMFSGAERAR------- 503 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCcc-------chHHHHHHHHHHHHHHHHccccccc-------
Confidence 45677888888889999888874322222 21121 2244 4466667777777787776532210
Q ss_pred CCcchhhhhhcCCCCCCCChHHHHHHHHHHHHHHHHHhhhcccc-----------ccccchhhhhhhHHHHHHHhhcchh
Q 006376 443 MNSALEEESLSGSLTSNFSPMAIRYRSVTSILESKLHEKSKMYK-----------DVSLQHIFLMNNIHYMAQKVKNSEL 511 (648)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~s~l~~~i~~ii~~L~~~Le~Ksk~y~-----------d~aL~~iFLmNN~~yI~~~v~~SeL 511 (648)
.....+......++.++...|+..++.-+ ...-.+|.++=|+||+...+..-..
T Consensus 504 ---------------~~r~~vd~aY~kl~~a~~~~l~~~a~~~~~~~~~~~~~dk~~~~~~v~~leN~~~~~e~l~~~~~ 568 (701)
T PF09763_consen 504 ---------------EDRSLVDKAYEKLVRAMFDSLERIAKLSPKNSGSQDPEDKEKLNYHVVLLENYHHFYEELSQLKI 568 (701)
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHHHhcccCcccccccCccccccchhhHHHHHHHHHHHHHHhhccc
Confidence 12235777788899999999999887543 2345799999999999999976544
Q ss_pred hhhhchHHHHHHHHHHHHHHHHHHHh----hHHhhhhhhccC------CCC---C---CCchh---h-hHH-HHHHHHHH
Q 006376 512 RLIFGDNWIRKHNWKFQQHAMDYERA----TWSSILPLLKDD------GNS---G---SSSVS---K-LKE-RFKNFYLA 570 (648)
Q Consensus 512 ~~lLG~~w~~~~~~~i~~~~~~Y~~~----sW~~vl~~L~~~------~~~---~---~~~~~---k-iKe-kfk~FN~~ 570 (648)
...| +.|.++-....+++...|... .++++..+.... ..+ + +-++. | |++ .-|..-..
T Consensus 569 ~~~l-~~~~~~A~~~~~~~~~~Y~~~~l~r~~~kL~~F~~gve~l~~~~~~~ei~~~~~ySk~~l~kvl~~y~~kev~k~ 647 (701)
T PF09763_consen 569 NSVL-EEFRKEAKQIYDEHLEAYVTFLLRRPFGKLLDFFEGVEALLQTVSPEEISYQAAYSKQELKKVLKSYPSKEVRKG 647 (701)
T ss_pred hhhH-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccCchhcccchhccHHHHHHHHHhCChHHHHHH
Confidence 2222 456666666666655566554 445554443221 111 0 01111 1 333 34445667
Q ss_pred HHHHHHhcccee-------ccChhHHHHHHHHHHHHHHHHHHHHHH
Q 006376 571 FEEVYKTQSAWV-------IPNVHLREDLRISISLKVIQAYRTFES 609 (648)
Q Consensus 571 Fee~~~~Q~~w~-------VpD~~LR~~Lr~~i~~~ViPaY~~F~~ 609 (648)
.+.+|++=..-- ..+..|-+.+=.++.+..+-.|.+|.+
T Consensus 648 i~~l~krveKHf~~~~~~~~~~~~Ll~~vW~~~q~~~i~~~~~l~~ 693 (701)
T PF09763_consen 648 IEALYKRVEKHFSRDADDPSFEEDLLQVVWSAMQEEFIRQYERLET 693 (701)
T ss_pred HHHHHHHHHHHcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 777776543333 335666666666666666666666654
No 8
>KOG2148 consensus Exocyst protein Sec3 [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.19 E-value=26 Score=40.27 Aligned_cols=209 Identities=16% Similarity=0.218 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccC--CCC-CCCCcccccHHHHHHHHHHHhhcHHHHHHHHhcCCCCCCCCCccCC
Q 006376 367 YYEVLRRVGDSVRGTFMEFENAIASYTA--SNP-FAGGGVLHLTKYVMNYLRTLTDYTETLNLLLRNHDKEDPSSAPANM 443 (648)
Q Consensus 367 ~~~~l~~L~~~~~~~f~ef~~~I~~~~s--~~~-~~dG~Vh~lT~~vmnyl~~L~~y~~~L~~il~~~~~~~~~~~~~~~ 443 (648)
+.-.+..|--.++.-|..|...-.+.-. +.. -.-|||-| |+-.+..|-...+.|+....
T Consensus 605 ls~tlgsllv~VkrqFdrfiq~qc~qieevki~kksk~gILP-------yv~rFenfa~raE~if~nae----------- 666 (867)
T KOG2148|consen 605 LSLTLGSLLVRVKRQFDRFIQNQCSQIEEVKIAKKSKIGILP-------YVFRFENFARRAEIIFENAE----------- 666 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-------cHHHHHHHHHHHHHHHhhhh-----------
Confidence 3334555566667777777654332221 111 13456666 66677777778888886421
Q ss_pred CcchhhhhhcCCCCCCCChHHHHHHHHHHHHHHHHHhhhccccccccchhhhhhhHHHHHHHhhcchhhhhhchHHH-HH
Q 006376 444 NSALEEESLSGSLTSNFSPMAIRYRSVTSILESKLHEKSKMYKDVSLQHIFLMNNIHYMAQKVKNSELRLIFGDNWI-RK 522 (648)
Q Consensus 444 ~~~~~~~~~~~~~~~~~s~l~~~i~~ii~~L~~~Le~Ksk~y~d~aL~~iFLmNN~~yI~~~v~~SeL~~lLG~~w~-~~ 522 (648)
..+.+...-..++.+...+++.-|..|+... +.|-+|-|+|++...+- +|. +-+-+-. ..
T Consensus 667 ---------------rRtdlekaYtklvravfvgiek~Aqq~pKtp-~dVv~mENyh~~y~tLs--~Lk-is~lda~kke 727 (867)
T KOG2148|consen 667 ---------------RRTDLEKAYTKLVRAVFVGIEKIAQQDPKTP-ADVVLMENYHHFYATLS--DLK-ISCLDAAKKE 727 (867)
T ss_pred ---------------hcchHHHHHHHHHHHHHHHHHHHHhcCCCCH-HHHHHHhhHHHHHHHHH--HHh-ccchhHHHHH
Confidence 2334566667888888899999888887632 46779999999987763 343 2333333 33
Q ss_pred HHHHHHHHHHHHHHhhHHhhhhhhcc--CCC-----CCC----------Cchh---h-hHHHHHH-HHHHHHHHHHhccc
Q 006376 523 HNWKFQQHAMDYERATWSSILPLLKD--DGN-----SGS----------SSVS---K-LKERFKN-FYLAFEEVYKTQSA 580 (648)
Q Consensus 523 ~~~~i~~~~~~Y~~~sW~~vl~~L~~--~~~-----~~~----------~~~~---k-iKekfk~-FN~~Fee~~~~Q~~ 580 (648)
+......+.+.|+..+.|..+..|.. +|. .|- -++- | |++--.+ --.+.|.+|++=..
T Consensus 728 aka~~~dhl~ayV~~~~GrPLekln~Ffe~v~~~vaqGirpeeiSYQ~aFsk~elrkvi~qypgkEVkKglenlYKKveK 807 (867)
T KOG2148|consen 728 AKALYADHLAAYVKESMGRPLEKLNTFFEGVNNKVAQGIRPEEISYQLAFSKQELRKVIKQYPGKEVKKGLENLYKKVEK 807 (867)
T ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHhhHHHHhcCCChhhhhHHHHhhHHHHHHHHHHcchhhHHHHHHHHHHHHHH
Confidence 45566667888888888877766543 221 110 0111 1 3332222 55688999987555
Q ss_pred eeccChhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 006376 581 WVIPNVHLREDLRISISLKVIQAYRTFESRHK 612 (648)
Q Consensus 581 w~VpD~~LR~~Lr~~i~~~ViPaY~~F~~ry~ 612 (648)
--+.+..|-+.+=.+.++-.+--|..|-+.-.
T Consensus 808 nL~aeenLLqvvW~~mqeeFi~qy~~f~~lIa 839 (867)
T KOG2148|consen 808 NLLAEENLLQVVWHKMQEEFIDQYESFEQLIA 839 (867)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55568888888888888888888888876543
No 9
>PF04136 Sec34: Sec34-like family ; InterPro: IPR007265 Sec34 and Sec35 form a sub-complex in a seven-protein complex that includes Dor1. This complex is thought to be important for tethering vesicles to the Golgi [].; GO: 0006886 intracellular protein transport, 0005801 cis-Golgi network, 0016020 membrane
Probab=91.62 E-value=2.3 Score=40.62 Aligned_cols=90 Identities=14% Similarity=0.139 Sum_probs=68.1
Q ss_pred cchhhHHHHHHHHHHHHHhcccCc--cccccC--ChhcHHHHHHHHHHHHHHHHHhhcc-CcccCcchHHHHHHHHHHHH
Q 006376 58 EGVSEIEEQLNIVQEKILSREADQ--SMIWDS--GPDEASEYLNAADEARKLIERLDGL-CLEKNGHEKELLRKAHDVLQ 132 (648)
Q Consensus 58 ~~~~nie~~l~~~e~~i~~~~~~~--~~i~~~--~~~~~~~yL~av~~l~~~~~~l~~~-~~~~~~~~~~~l~~~~~Ll~ 132 (648)
...+.++...++|...+..|+.-. ..-+.. +...-+.|+.-+.+|+..+.||..+ ++++. ...+.|.+.++.
T Consensus 56 ~eq~~L~~~ae~I~~~L~yF~~Ld~itr~Ln~p~~sV~~~~F~~~L~~LD~cl~Fl~~h~~fkea---~~Y~~rf~q~lt 132 (157)
T PF04136_consen 56 EEQTRLEELAEEISEKLQYFEELDPITRRLNSPGSSVNSDSFKPMLSRLDECLEFLEEHPNFKEA---EVYLIRFRQCLT 132 (157)
T ss_pred HHHHHHHHHHHHHHHHhHHHhhHHHHHHHHcCCCCcccchHHHHHHHHHHHHHHHHHHhhhhhhh---HHHHHHHHHHHH
Confidence 445567777788888888888755 222222 2566778999999999999999965 34443 357889999999
Q ss_pred HHHHHHHHHHHHHHhccC
Q 006376 133 MAMNRLEEEFRHILVQNR 150 (648)
Q Consensus 133 ~am~~Le~eF~~lL~~~~ 150 (648)
.||.-+...|...|..-+
T Consensus 133 RAl~lIk~y~~~~l~~~~ 150 (157)
T PF04136_consen 133 RALTLIKNYVVNTLRSAT 150 (157)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998643
No 10
>PF07393 Sec10: Exocyst complex component Sec10; InterPro: IPR009976 This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex, which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins [].; GO: 0006887 exocytosis, 0048278 vesicle docking, 0005737 cytoplasm
Probab=87.41 E-value=71 Score=38.05 Aligned_cols=133 Identities=16% Similarity=0.260 Sum_probs=70.4
Q ss_pred cHHHHHHHHHHHHhCCCchHHHHHHHHhhHHHHHHHHHhhc-cccCcHHHhhhhchhhh----------hHHHHHHHHHH
Q 006376 208 VIPDLRCIANLMFLSNYDHECCQAYVMARKDALDECLFILE-MEKLSIEDVLKMEWGHL----------NSKIKRWVWAL 276 (648)
Q Consensus 208 ~i~~L~~Ia~~m~~~g~~~e~~~~Y~~~R~~~l~~sL~~L~-~~~~~~e~v~k~~w~~~----------~~~i~~wi~a~ 276 (648)
....++.+|..|..-+-+..|++.|++.+.-+.+. ..++ .+....+ -.|+.+ ..........+
T Consensus 127 d~~~M~~~A~vL~~fngg~~~i~~fi~k~~~f~~~--~~~~~~~~~~~~----~~~~~l~d~~~~~~~~~~~l~~~~~~i 200 (710)
T PF07393_consen 127 DYERMKEFAKVLLEFNGGSSCIDFFINKHEFFIDE--DQLDESNGFEDE----EIWEKLSDPDSHPPINEESLDAFFEDI 200 (710)
T ss_pred CHHHHHHHHHHHHHcCCCcHHHHHHHHhChhhhhh--hhhccccccchh----HHHHhccCcccccccchHHHHHHHHHH
Confidence 36788899999988877789999999977655521 1111 0110000 012111 12334444444
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcchh----hhHHHHHHHHHHHHHHHHHHHhcCCCCchh-hhhhhhHHHHHHhhHHHH
Q 006376 277 KIFVRSYLASEKFLSEQIFGEFEPVNV----SCFVEASKASMLQLLNFGEAVSIGPHKPEK-LFCILDMYEVLADLLSDI 351 (648)
Q Consensus 277 ~~~vk~L~~~E~~L~~~vf~~~~~~~~----~~F~~i~~~~~~~ll~f~~~va~~~~~pek-lf~lLdm~e~L~~l~p~~ 351 (648)
.. .+..|.++++.||+....+-. .+|.+..++-+..+|+-+.. .+++. |-.+-..|..+..+.-++
T Consensus 201 ~~----~i~~e~~iI~~VFp~~~~Vm~~fiervf~~~I~~~i~~lL~~a~~-----~s~~~YLr~l~~~y~~t~~lv~~L 271 (710)
T PF07393_consen 201 RD----VINEESKIIDRVFPNPEPVMQKFIERVFEQVIQEYIESLLEEASS-----ISTLAYLRTLHGLYSQTKKLVDDL 271 (710)
T ss_pred HH----HHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 445999999999988664333 23434334333333332221 13333 223334566665555555
Q ss_pred HHhh
Q 006376 352 DALY 355 (648)
Q Consensus 352 ~~lf 355 (648)
...+
T Consensus 272 ~~~~ 275 (710)
T PF07393_consen 272 KEFF 275 (710)
T ss_pred HHhh
Confidence 5553
No 11
>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []. COG7 is required for normal Golgi morphology and trafficking. Mutation in COG7 causes a congenital disorder of glycosylation [].
Probab=87.10 E-value=77 Score=38.15 Aligned_cols=133 Identities=16% Similarity=0.202 Sum_probs=81.2
Q ss_pred cHHHHHHHHHHHHhCCCchHHHHHHHHhhHHHHHHHHHhhccccCcHHHhhhhchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 006376 208 VIPDLRCIANLMFLSNYDHECCQAYVMARKDALDECLFILEMEKLSIEDVLKMEWGHLNSKIKRWVWALKIFVRSYLASE 287 (648)
Q Consensus 208 ~i~~L~~Ia~~m~~~g~~~e~~~~Y~~~R~~~l~~sL~~L~~~~~~~e~v~k~~w~~~~~~i~~wi~a~~~~vk~L~~~E 287 (648)
.+...+...+.+..-|....+.+-|..+|+..+.+-=....... .......|+..+-..+-.++..|
T Consensus 199 ~~~~~~~~~~if~~i~R~~~l~~~Y~~~r~~~l~~~W~~~~~~~-------------~~~~~~~~L~~fyd~ll~~l~~E 265 (766)
T PF10191_consen 199 DVDAAKEYVKIFSSIGREPQLEQYYCKCRKAPLQRLWQEYCQSD-------------QSQSFAEWLPSFYDELLSLLHQE 265 (766)
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhhhc-------------cchhHHHHHHHHHHHHHHHHHHH
Confidence 34556666666667788999999999999987754222221110 00345667766666555578899
Q ss_pred HHHHhhhcCCCCcchhhhHHHHHHHHHHHHHH-HHHHHhc--CCCCch-hhhhhhhHHHHHHhhHHHHHHhhcc
Q 006376 288 KFLSEQIFGEFEPVNVSCFVEASKASMLQLLN-FGEAVSI--GPHKPE-KLFCILDMYEVLADLLSDIDALYAD 357 (648)
Q Consensus 288 ~~L~~~vf~~~~~~~~~~F~~i~~~~~~~ll~-f~~~va~--~~~~pe-klf~lLdm~e~L~~l~p~~~~lf~~ 357 (648)
.+-|.+||+.... +...+....+..|-. |...|.. ....|+ ++..++++|.+-.+..-.++.+|..
T Consensus 266 ~~w~~~vF~~~~~----~~~~ll~~~L~~L~PS~~~~l~~al~~~~~~~~L~~L~~l~~~t~~Fa~~l~~~l~~ 335 (766)
T PF10191_consen 266 LKWCSQVFPDESP----VLPKLLAETLSALQPSFPSRLSSALKRAGPETKLETLIELYQATEHFARNLEHLLSS 335 (766)
T ss_pred HHHHHHHcCCchh----HHHHHHHHHHHhcCccHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999998754 222222222332221 4433321 122333 4788888888887777777777755
No 12
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=55.87 E-value=61 Score=38.91 Aligned_cols=102 Identities=22% Similarity=0.204 Sum_probs=59.7
Q ss_pred hhhhhhHHHHHHHhhcchhhhhhchHHHHHHHHHHHHHHHHHHHhhHHhhhhhhcc-CCCCCCCchhh-hHHHHHHHHHH
Q 006376 493 IFLMNNIHYMAQKVKNSELRLIFGDNWIRKHNWKFQQHAMDYERATWSSILPLLKD-DGNSGSSSVSK-LKERFKNFYLA 570 (648)
Q Consensus 493 iFLmNN~~yI~~~v~~SeL~~lLG~~w~~~~~~~i~~~~~~Y~~~sW~~vl~~L~~-~~~~~~~~~~k-iKekfk~FN~~ 570 (648)
=|+||-+.-|..++-+-||..-+|+---+.....+.|-... +..-|.. +| ..++ |-.-+|.=|
T Consensus 961 q~~s~~~~~~~e~ti~~El~~tv~P~v~rs~~p~~~q~~~s--------~itkl~~~eg-----~~kenI~ql~KSkn-- 1025 (1283)
T KOG1916|consen 961 QFLSKELNAMFEKTIKKELAKTVGPCVARSVEPVIEQTVSS--------AITKLFQREG-----IGKENINQLLKSKN-- 1025 (1283)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhhhhhhHHHHHHHHHH--------HHHHHHHhhc-----hHHHHHHHHHhhcc--
Confidence 36777777776666666777767764433333333332211 1111111 11 1222 555555555
Q ss_pred HHHHHHhccceecc-ChhHHHHHHHHHHHHHHHHHHHHHH
Q 006376 571 FEEVYKTQSAWVIP-NVHLREDLRISISLKVIQAYRTFES 609 (648)
Q Consensus 571 Fee~~~~Q~~w~Vp-D~~LR~~Lr~~i~~~ViPaY~~F~~ 609 (648)
|++++.+|-.-.+- ...|.+.+|.+....|||+|.+=..
T Consensus 1026 l~dtvar~i~~~~Qtsg~lQ~a~resm~SsviPafEKScq 1065 (1283)
T KOG1916|consen 1026 LEDTVARQIQAQFQTSGPLQEALRESMESSVIPAFEKSCQ 1065 (1283)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHhhhhccHHHHHHHH
Confidence 77777776555552 2239999999999999999987544
No 13
>PRK10807 paraquat-inducible protein B; Provisional
Probab=52.36 E-value=42 Score=38.63 Aligned_cols=26 Identities=8% Similarity=0.176 Sum_probs=17.5
Q ss_pred CCCCCCchH-HHHHHHHHHHHHHHhhh
Q 006376 6 KIVPEMGEE-ENLIAAAEHLVRALGSN 31 (648)
Q Consensus 6 ~~~~~~~~~-~~~~a~~~~l~~~L~~s 31 (648)
.+||+..+. +.+.+.++.|.+.+++-
T Consensus 406 pvIPt~ps~l~~l~~~~~~il~kin~l 432 (547)
T PRK10807 406 PIIPTVSGGLAQIQQKLMEALDKINNL 432 (547)
T ss_pred ceeecCCCCHHHHHHHHHHHHHHHhcC
Confidence 577776655 77777666666666655
No 14
>KOG3821 consensus Heparin sulfate cell surface proteoglycan [Signal transduction mechanisms]
Probab=49.60 E-value=25 Score=39.73 Aligned_cols=63 Identities=16% Similarity=0.183 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHHHHHHhccceeccChhHHHHHHHHHHHHHHHHHHHHHHHhcccc------CCCccccCHHHHHHHHhh
Q 006376 560 LKERFKNFYLAFEEVYKTQSAWVIPNVHLREDLRISISLKVIQAYRTFESRHKNQI------SDKHIKYSADDLQSYLLD 633 (648)
Q Consensus 560 iKekfk~FN~~Fee~~~~Q~~w~VpD~~LR~~Lr~~i~~~ViPaY~~F~~ry~~~~------~~KyiKYtpe~Le~~L~~ 633 (648)
+-.+.+.|++.|+|+.+.-. .....+..-.|+++|-.....+ -.-|..++-..+|.+|++
T Consensus 100 l~s~~r~F~E~f~ell~~ae--------------~~l~~mF~~tYg~ly~qn~~~~~dlFtel~~y~~~~~~nlee~l~e 165 (563)
T KOG3821|consen 100 LASNARKFDEFFLELLRNAE--------------NSLNAMFSKTYGSLYPQNAELFNDLFTELKLYYVGSNVNLEETLNE 165 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhccccCCHHHHHHH
Confidence 77889999999999987532 3556677888888887665543 335788899999999999
Q ss_pred hhC
Q 006376 634 LFE 636 (648)
Q Consensus 634 LFe 636 (648)
||.
T Consensus 166 ff~ 168 (563)
T KOG3821|consen 166 FFA 168 (563)
T ss_pred HHH
Confidence 885
No 15
>KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=43.24 E-value=1.1e+02 Score=36.22 Aligned_cols=85 Identities=19% Similarity=0.242 Sum_probs=50.1
Q ss_pred HHHHhhHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CC-CCCCCCcccccHHHH------HHH
Q 006376 342 EVLADLLSDIDALYADKIGSSVRIEYYEVLRRVGDSVRGTFMEFENAIASYT-AS-NPFAGGGVLHLTKYV------MNY 413 (648)
Q Consensus 342 e~L~~l~p~~~~lf~~~~~~~~~~~~~~~l~~L~~~~~~~f~ef~~~I~~~~-s~-~~~~dG~Vh~lT~~v------mny 413 (648)
|...++.|+++.+.... ...+|..+.-+.-++...+=....-|....++-- ++ .-+..++||.+|+-. ++|
T Consensus 138 EmardlapeVe~Ll~~~-~~~irKKA~Lca~r~irK~P~l~e~f~~~~~~lL~ek~hGVL~~~l~l~~e~c~~~~~~l~~ 216 (866)
T KOG1062|consen 138 EMARDLAPEVERLLQHR-DPYIRKKAALCAVRFIRKVPDLVEHFVIAFRKLLCEKHHGVLIAGLHLITELCKISPDALSY 216 (866)
T ss_pred HHhHHhhHHHHHHHhCC-CHHHHHHHHHHHHHHHHcCchHHHHhhHHHHHHHhhcCCceeeeHHHHHHHHHhcCHHHHHH
Confidence 34678889999998763 3457777766666665555555555554444321 12 236789999988754 445
Q ss_pred HHHHh-hcHHHHHHH
Q 006376 414 LRTLT-DYTETLNLL 427 (648)
Q Consensus 414 l~~L~-~y~~~L~~i 427 (648)
.+.+. ++-..|.++
T Consensus 217 fr~l~~~lV~iLk~l 231 (866)
T KOG1062|consen 217 FRDLVPSLVKILKQL 231 (866)
T ss_pred HHHHHHHHHHHHHHH
Confidence 55444 333334444
No 16
>PHA01746 hypothetical protein
Probab=41.56 E-value=9.6 Score=33.59 Aligned_cols=22 Identities=9% Similarity=0.339 Sum_probs=16.2
Q ss_pred HHHHHHHhccccCCCccccCHHH
Q 006376 604 YRTFESRHKNQISDKHIKYSADD 626 (648)
Q Consensus 604 Y~~F~~ry~~~~~~KyiKYtpe~ 626 (648)
-..|+++|.+.. .|||||||.+
T Consensus 76 Ia~FLeKYS~~L-nkYVkFs~~n 97 (131)
T PHA01746 76 IAEFLEKYSDFL-NEYVKFTPRN 97 (131)
T ss_pred HHHHHHHHHHHH-HHHeeeccCC
Confidence 367888887654 6889998854
No 17
>TIGR02553 SipD_IpaD_SspD type III effector protein IpaD/SipD/SspD. These proteins are found within type III secretion operons and have been shown to be secreted by that system.
Probab=38.68 E-value=1.2e+02 Score=31.96 Aligned_cols=108 Identities=17% Similarity=0.171 Sum_probs=62.0
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccCCCCCCCc-hhhhHHHHHHHHHHHHHHHHhcc------------c
Q 006376 514 IFGDNWIRKHNWKFQQHAMDYERATWSSILPLLKDDGNSGSSS-VSKLKERFKNFYLAFEEVYKTQS------------A 580 (648)
Q Consensus 514 lLG~~w~~~~~~~i~~~~~~Y~~~sW~~vl~~L~~~~~~~~~~-~~kiKekfk~FN~~Fee~~~~Q~------------~ 580 (648)
-++++.+..+...+++|+.-|+ +.+.+++-|.+-..+|+-+ . ||=..+.|-.+++++..+.. .
T Consensus 116 ~Ik~dYldvYa~lvk~YTd~yQ--~fn~~lSkls~~IsaG~DGn~--VkFd~~~lk~~l~~~~~Ky~~~~~~~pa~~~~~ 191 (308)
T TIGR02553 116 KIGDSYLGVYENVVEGYTDFYQ--AFSDILSKMQDWISPGKDGNN--VKLDVGKLKALLQQLIDHLPNQINSFPAQSDGG 191 (308)
T ss_pred HHHhhHHHHHHHHHHHHHHHHH--HHHHHHHHHhhhcccCCCCCe--eeeCHHHHHHHHHHHHHHhccCccCCccccccc
Confidence 4567788889999999997776 5788999886544344211 1 44444555555555555544 3
Q ss_pred eeccC-hhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccCHHHHHHHHhhhh
Q 006376 581 WVIPN-VHLREDLRISISLKVIQAYRTFESRHKNQISDKHIKYSADDLQSYLLDLF 635 (648)
Q Consensus 581 w~VpD-~~LR~~Lr~~i~~~ViPaY~~F~~ry~~~~~~KyiKYtpe~Le~~L~~LF 635 (648)
|.++- .+.. ..++++.-.|-|+ .-+. .+ +|+.++..|..++.+|=
T Consensus 192 i~~~s~~Ea~-~W~keLg~~v~~~-----~~~~---~G-~I~~dl~~i~~m~~sl~ 237 (308)
T TIGR02553 192 MQLPKEADAR-RWRKELGLPVSCL-----QISD---SG-VVTVDPTPLIKMRDDLP 237 (308)
T ss_pred cccCcHHHHH-HHHHHhCCCCccc-----cccC---CC-eEEeChHHHHHHHHhcC
Confidence 33332 1222 2222221111111 1111 33 89999999999999983
No 18
>PF05659 RPW8: Arabidopsis broad-spectrum mildew resistance protein RPW8; InterPro: IPR008808 This entry represents the RPW8 domain found in several broad-spectrum mildew resistance proteins from Arabidopsis thaliana and other dicots. Plant disease resistance (R) genes control the recognition of specific pathogens and activate subsequent defence responses. The R protein-mediated defences typically involve a rapid, localized necrosis, or hypersensitive response (HR), at the site of infection, and the localised formation of antimicrobial chemicals and proteins that restrict growth of the pathogen. The A. thaliana locus Resistance to Powdery Mildew 8 (RPW8) contains two naturally polymorphic, dominant R genes: RPW8.1 and RPW8.2, which individually control resistance to a broad range of powdery mildew pathogens. They induce localised, salicylic acid-dependent defences similar to those induced by R genes that control specific resistance. Apparently, broad-spectrum resistance mediated by RPW8 uses the same mechanisms as specific resistance [, ]. RPW8.1 and RPW8.2 share similarity with an ~150 amino acid module forming the N terminus of a group of disease resistance proteins, which have a nucleotide-binding site (NBS) and leucine-rich repeats (LRRs) [, ]. The RPW8 domain sequences contain a predicted N-terminal transmembrane (TM) region or possibly a signal peptide, and a coiled-coil (CC) motif [].
Probab=31.12 E-value=2.4e+02 Score=26.50 Aligned_cols=97 Identities=18% Similarity=0.206 Sum_probs=65.9
Q ss_pred CchHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhhhccccC------------c--cchhhHHHHHHHHHHHHHh
Q 006376 11 MGEEENLIAAAEHLVRALGSNKNLTSNMKRVLADLGSQLSTMATIS------------D--EGVSEIEEQLNIVQEKILS 76 (648)
Q Consensus 11 ~~~~~~~~a~~~~l~~~L~~s~~lt~~~~~~l~~~d~rl~~~~~~~------------p--~~~~nie~~l~~~e~~i~~ 76 (648)
+-|...|=|+++.|.+.+-.-..=+-....++.+++..+.++...+ | ........+|+.+..++.+
T Consensus 5 L~~gaalG~~~~eLlk~v~~~~~k~~~fk~~l~~L~sTl~~i~P~i~eI~~~~~eld~~~~ee~e~L~~~L~~g~~LV~k 84 (147)
T PF05659_consen 5 LVGGAALGAVFGELLKAVIDASKKSLSFKSILKRLESTLESIIPIIKEIDKLNVELDRPRQEEIERLKELLEKGKELVEK 84 (147)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhHHHHHHHHhhhcCCchhHHHHHHHHHHHHHHHHHHH
Confidence 3456778888999999988888888888888888888887776432 1 2233445567777778877
Q ss_pred cccCc-cccccCChhcHHHHHHHHHHHHHHHHHhhcc
Q 006376 77 READQ-SMIWDSGPDEASEYLNAADEARKLIERLDGL 112 (648)
Q Consensus 77 ~~~~~-~~i~~~~~~~~~~yL~av~~l~~~~~~l~~~ 112 (648)
+-..+ --+++.+ .|-.-++++.+.+..|-..
T Consensus 85 ~sk~~r~n~~kk~-----~y~~Ki~~le~~l~~f~~v 116 (147)
T PF05659_consen 85 CSKVRRWNLYKKP-----RYARKIEELEESLRRFIQV 116 (147)
T ss_pred hccccHHHHHhhH-----hHHHHHHHHHHHHHHHhcc
Confidence 77654 1122222 4888888888888766543
No 19
>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]
Probab=30.78 E-value=2.9e+02 Score=34.46 Aligned_cols=48 Identities=17% Similarity=0.254 Sum_probs=26.5
Q ss_pred hcHHHHHHHHHHHHHHHHHhhccCcccCcchHHHHHHHHHHHHHHHHHHHH
Q 006376 90 DEASEYLNAADEARKLIERLDGLCLEKNGHEKELLRKAHDVLQMAMNRLEE 140 (648)
Q Consensus 90 ~~~~~yL~av~~l~~~~~~l~~~~~~~~~~~~~~l~~~~~Ll~~am~~Le~ 140 (648)
..+..|.+.+++|..- .++ .+...........++|..|+..|+.+|..
T Consensus 1664 ~~lq~~~~~~~~l~~~--r~~-g~~~ar~rAe~L~~eA~~Ll~~a~~kl~~ 1711 (1758)
T KOG0994|consen 1664 EILQKYYELVDRLLEK--RME-GSQAARERAEQLRTEAEKLLGQANEKLDR 1711 (1758)
T ss_pred HHHHHHHHHHHHHHHH--Hhh-cchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566677777775321 111 11111111234677888888888888753
No 20
>COG2733 Predicted membrane protein [Function unknown]
Probab=27.48 E-value=3.5e+02 Score=29.65 Aligned_cols=90 Identities=20% Similarity=0.229 Sum_probs=59.5
Q ss_pred HHHHHHHhhHHhhhhhhccCCCCCCCchhhhH-HHHHHHHHHHHHHHHhccceeccChhHHHHHHHHHH---HHHHHHHH
Q 006376 530 HAMDYERATWSSILPLLKDDGNSGSSSVSKLK-ERFKNFYLAFEEVYKTQSAWVIPNVHLREDLRISIS---LKVIQAYR 605 (648)
Q Consensus 530 ~~~~Y~~~sW~~vl~~L~~~~~~~~~~~~kiK-ekfk~FN~~Fee~~~~Q~~w~VpD~~LR~~Lr~~i~---~~ViPaY~ 605 (648)
....|....|+....+|..+--+ ..+.++ --++.|++-++++ +.|++||..|..-+. +.+++-|.
T Consensus 290 ~i~~~~~~~w~~~~~~l~~D~e~---~~s~l~~~l~~~~~~~Ge~l--------~~D~~lr~kln~~~~~aa~~l~e~~~ 358 (415)
T COG2733 290 AIATAAGDMWTSLSEWLKEDYES---EDSMLRKRLARAVQSVGEEL--------IADDALRAKLNEHLVQAAERLAEEKH 358 (415)
T ss_pred HHHHHHHHHHHHHHHHHHhcccC---chhHHHHHHHHHHHHHHHHH--------hccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44578888999999998876321 111133 3467788888876 359999998876554 34566666
Q ss_pred HHHHHhccccCCCccccCHHHHHHHHhh
Q 006376 606 TFESRHKNQISDKHIKYSADDLQSYLLD 633 (648)
Q Consensus 606 ~F~~ry~~~~~~KyiKYtpe~Le~~L~~ 633 (648)
.++.++-. +.-=+|+.+++.++|..
T Consensus 359 ~~it~~I~---dTv~~wD~~elsr~iel 383 (415)
T COG2733 359 AEITKHIS---DTVKRWDAEELSRQIEL 383 (415)
T ss_pred HHHHHHHH---HHHhhcCHHHHHHHHHH
Confidence 66666543 22236799998888753
No 21
>KOG2047 consensus mRNA splicing factor [RNA processing and modification]
Probab=26.01 E-value=72 Score=37.03 Aligned_cols=39 Identities=15% Similarity=0.196 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhcccc-----CCCccccCHHHHHHHHhhhh
Q 006376 597 SLKVIQAYRTFESRHKNQI-----SDKHIKYSADDLQSYLLDLF 635 (648)
Q Consensus 597 ~~~ViPaY~~F~~ry~~~~-----~~KyiKYtpe~Le~~L~~LF 635 (648)
-..|-|.|-+|++.++--. -++|+|+.|++.|++|.-|=
T Consensus 137 H~rIW~lyl~Fv~~~~lPets~rvyrRYLk~~P~~~eeyie~L~ 180 (835)
T KOG2047|consen 137 HDRIWDLYLKFVESHGLPETSIRVYRRYLKVAPEAREEYIEYLA 180 (835)
T ss_pred hccchHHHHHHHHhCCChHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4578999999999987421 45899999999999987663
No 22
>KOG3745 consensus Exocyst subunit - Sec10p [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.63 E-value=1.2e+03 Score=27.90 Aligned_cols=70 Identities=14% Similarity=0.075 Sum_probs=49.4
Q ss_pred HHHHHHHHHhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHHhc---CCCCchh-hhhhhhHHHHHHhhHHHHHHhh
Q 006376 283 YLASEKFLSEQIFGEFEPVNVSCFVEASKASMLQLLNFGEAVSI---GPHKPEK-LFCILDMYEVLADLLSDIDALY 355 (648)
Q Consensus 283 L~~~E~~L~~~vf~~~~~~~~~~F~~i~~~~~~~ll~f~~~va~---~~~~pek-lf~lLdm~e~L~~l~p~~~~lf 355 (648)
|..+|......||+....+-..|+..|-...+- .|.+.+.. .+.+-++ +-.+.++|-...++.+++...|
T Consensus 279 l~~~~sk~ik~vf~~pe~V~q~~iq~If~~~ik---~~~~e~le~~~~~~~~l~ylR~L~~Lys~~~k~~~~L~~~~ 352 (763)
T KOG3745|consen 279 LCESESKFIKRVFPNPETVLQKFIQNIFGQKIK---DRVEELLEECKEGKDFLAYLRDLYGLYSSTLKLSKDLVDYF 352 (763)
T ss_pred HHHhHhHHHHHhCCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHhhccccHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 677999999999999887777788777765555 34444322 1344454 6667788888888888777663
No 23
>PF10732 DUF2524: Protein of unknown function (DUF2524); InterPro: IPR019668 This entry represents proteins with unknown function, and appear to be restricted to the Bacillaceae.
Probab=22.50 E-value=2.1e+02 Score=24.25 Aligned_cols=44 Identities=23% Similarity=0.267 Sum_probs=32.9
Q ss_pred hhcHHHHHHHHHHHHHHHHHhhccCcccCcchHHHHHHHHHHHH
Q 006376 89 PDEASEYLNAADEARKLIERLDGLCLEKNGHEKELLRKAHDVLQ 132 (648)
Q Consensus 89 ~~~~~~yL~av~~l~~~~~~l~~~~~~~~~~~~~~l~~~~~Ll~ 132 (648)
+.+..+|-+|.-+|..+...|.......|+...+.|.|+.--++
T Consensus 33 hynd~eYt~Aq~~LE~a~neL~~l~~sAN~qQREqL~R~rlQlq 76 (84)
T PF10732_consen 33 HYNDEEYTEAQQMLEEAYNELEKLAHSANPQQREQLHRMRLQLQ 76 (84)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 57778899999999999998886655556556677777765443
No 24
>PF15335 CAAP1: Caspase activity and apoptosis inhibitor 1
Probab=22.12 E-value=1.1e+02 Score=24.64 Aligned_cols=23 Identities=30% Similarity=0.596 Sum_probs=20.2
Q ss_pred HHHHHHhhHHHHHHHHHhhcccc
Q 006376 229 CQAYVMARKDALDECLFILEMEK 251 (648)
Q Consensus 229 ~~~Y~~~R~~~l~~sL~~L~~~~ 251 (648)
+..|.+-|.+.+.+++..++..+
T Consensus 5 is~Yi~Dr~Eml~Q~F~~l~~kk 27 (64)
T PF15335_consen 5 ISFYIDDRKEMLRQCFSVLKEKK 27 (64)
T ss_pred HHHHHccHHHHHHHHHHHcCHHH
Confidence 56899999999999999998764
Done!