Your job contains 1 sequence.
>006378
MDNPSNNFPEKQAWGTKEELLLACAVHRYGTQNWISVATEVQKRSSKFQLLTPLSCQQKY
NDLKRRFSGNDAVSISADNSDDAIPWLDQLKKLRVAELKRELQLFDISIVSLQLKVERLI
EEREGKETEDGEKRKRIEENEPESLTDKPDGGEESDRENRSVNESNSTDQKAEKTAKEPV
PSEPVRVEPEGVGSEGVKAAGEDSCNGSCGSAAKELERNTDRVDSAELGESAAESMGRES
GDVQSFVSLLREKVKSEEPEEVEPGIGEDQSPAATKRICAESRPLVECIEIIRSHKFGSF
FERLDATKETPDYRSIVRQHTDLETIRTRLEENWYSGSNSSFFHDLLLLFNNVIVFFDKN
SSESAAAVELRQIVLKAMTRNTFDPNSSMREQYLEFAAAQNVKLDVQSSDFLLSKPNILA
PLIACRKRSSITAKRAVSLSSSLEAKKKEHTESSIGKNTVPSSVKSDDDCRATKKRTRER
SASGSGNSSKNRKTRDNMKTKKNLDVDIDADDSSDVEETECENSQRKNKANVNAKKRSAE
IFLSRITRSSTLKDFVISSEDGKGERAEQKKKAEHKKKKGNGKIDAKKEQIVQKRSGGKK
GEEMEGPVKKNGGRLTKRGAVPVAVGAEVSRGKRRKESVQARKRSRK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006378
(647 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2095878 - symbol:AT3G57980 species:3702 "Arabi... 671 5.8e-66 1
TAIR|locus:2060040 - symbol:AT2G42150 species:3702 "Arabi... 659 1.1e-64 1
TAIR|locus:2050574 - symbol:AT2G44430 species:3702 "Arabi... 502 4.2e-53 2
TAIR|locus:2101477 - symbol:AT3G60110 species:3702 "Arabi... 294 2.5e-47 2
TAIR|locus:1006230673 - symbol:BRD4 "AT1G61215" species:3... 192 4.6e-21 2
UNIPROTKB|Q9H0E9 - symbol:BRD8 "Bromodomain-containing pr... 108 8.0e-05 3
FB|FBgn0004656 - symbol:fs(1)h "female sterile (1) homeot... 112 0.00015 2
>TAIR|locus:2095878 [details] [associations]
symbol:AT3G57980 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR001005 InterPro:IPR001487 Pfam:PF00249
Pfam:PF00439 PROSITE:PS50014 SMART:SM00297 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003682
InterPro:IPR017930 PROSITE:PS51294 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AL132977 HOGENOM:HOG000242892
ProtClustDB:CLSN2718100 IPI:IPI00525752 PIR:T46020
RefSeq:NP_191357.1 UniGene:At.28706 ProteinModelPortal:Q9M2Q0
SMR:Q9M2Q0 PRIDE:Q9M2Q0 EnsemblPlants:AT3G57980.1 GeneID:824967
KEGG:ath:AT3G57980 TAIR:At3g57980 InParanoid:Q9M2Q0 OMA:ESMDESK
PhylomeDB:Q9M2Q0 Genevestigator:Q9M2Q0 Uniprot:Q9M2Q0
Length = 632
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 211/652 (32%), Positives = 299/652 (45%)
Query: 18 EELLLACAVHRYGTQNWISVATEVQKRSSKFQLLTPLSCQQKYNDLKRRFSGNDAVSISA 77
EELLLACAVHR+GT +W SVA+EV K++S F+ LT + C+ KYNDLKRRFS N SA
Sbjct: 2 EELLLACAVHRHGTDSWDSVASEVHKQNSTFRTLTAIDCRHKYNDLKRRFSRNLVSPGSA 61
Query: 78 DNSD-----DAIPWLDQLKKLRVAELKRELQLFDISIVSLQLKVERLIXXXXXXXXXXXX 132
D ++PWL++L+KLRV EL+RE++ +D+SI SLQLKV+ L
Sbjct: 62 DEETLAAEISSVPWLEELRKLRVDELRREVERYDLSISSLQLKVKTLEDEREKSLKTENS 121
Query: 133 XXXXIEENEPESLTDKPD--GGEESDRENRSVNESNSTDQKAEKTAKXXXXXXXXXXX-- 188
I E + E+ T+ + G ++ +N NS +E T +
Sbjct: 122 DLDRIAETK-ENHTESGNNSGVPVTELKNSPDPNDNSPGTGSENTNRAVKIAEPVDEEPN 180
Query: 189 XXXXXXXXXKAAGEDSCNGSCGSAAKELER---NTDRVDSAELGESAAESMG----RESG 241
K A EDS GSC S AKE +R + DS EL ES ES G +E+
Sbjct: 181 RIGGEDNDEKPAREDSGRGSCESVAKESDRAEPKREGNDSPELVESMDESKGEEDTKETS 240
Query: 242 DVQSFVSLLRXXXXXXXXXXXXXXXXXDQSPAATKRICAESRPLVECIEIIRSHKFGSFF 301
D QS S R DQS K I ES+PL + IEI++SH GS F
Sbjct: 241 DGQSSASFPRKETVDQDQPDNK-----DQSLTVNK-IFVESQPLSDFIEILQSHPIGSHF 294
Query: 302 ERLDATKETPDYRSIVRQHTDLETIRTRLEENWYSGSNSSFFHDXXXXFNNVIVFFDKNS 361
R T+ET DY I+RQH D E IR+R+EE +Y + + FF D NNV VF+ + S
Sbjct: 295 SRRLETQETSDYYRIIRQHIDFEMIRSRVEEGYYKTARTKFFRDLLLLINNVRVFYGEPS 354
Query: 362 SESAAAVELRQIVLKAMTRNTFDPNSSMREQYLEFAAAQNVKLDVQSSDFLLSKPNILAP 421
E AA +L Q++ K M+ P ++ + A K +V+ S KP + P
Sbjct: 355 PEFNAAKQLYQLIKKQMSFKI--PKQTLPPPKED--ALVTSKEEVKVSSL---KPTLSVP 407
Query: 422 LIACRKRSSITAKRAVXXXXXXEAKKKEHTESSIGKNTVPSSVKSDDDCRATKKRTRERS 481
+IACRKRSS+ + KKK ++ + V + + K ++
Sbjct: 408 IIACRKRSSLAVRSPASVTETL--KKKTRVVPTVDEKQVSEEEEGRPSDKDEKPIVSKKM 465
Query: 482 ASGSGNSSKNRKTRDNMKTKKNLXXXXXXXXXXXXEETECENSQRXXXXXXXXXXR-SAE 540
A G+ S+ + N+KT N + Q+ + SA
Sbjct: 466 ARGAAPSTAKKVGSRNVKTSLNAGISNRGRSPNGSSVLKKSVQQKKGINTSGGSKKQSAA 525
Query: 541 IFLSRITRSSTLKDFV--ISSEDGKGER-AEQXXXXXXXXXXXXXXXXXXXXQIVQKRSG 597
FL R+ S+ + V + +E G+R AEQ ++ KR
Sbjct: 526 SFLKRMKGVSSSETVVETVKAESSNGKRGAEQRKSNSKSEKVDAVKLPAGQKRLTGKRPT 585
Query: 598 GKKGEEMEGPVKKNGGRLTKRGAVPVAV--GAEVSRGKRRKESVQARKRSRK 647
+KG P KKN G +KRG + +E S K S + +KRS++
Sbjct: 586 IEKGS----PTKKNSGVASKRGTASLMAKRDSETSE-KETGSSTRPKKRSKR 632
>TAIR|locus:2060040 [details] [associations]
symbol:AT2G42150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] InterPro:IPR001005 InterPro:IPR001487
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 SMART:SM00717 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 EMBL:AC002561
Gene3D:1.20.920.10 SUPFAM:SSF47370 UniGene:At.42743
UniGene:At.42745 IPI:IPI00537143 PIR:T00925 RefSeq:NP_181745.1
ProteinModelPortal:O48523 SMR:O48523 PaxDb:O48523 PRIDE:O48523
EnsemblPlants:AT2G42150.1 GeneID:818815 KEGG:ath:AT2G42150
TAIR:At2g42150 eggNOG:NOG244537 HOGENOM:HOG000242892
InParanoid:O48523 OMA:LMNETIS PhylomeDB:O48523
ProtClustDB:CLSN2718100 ArrayExpress:O48523 Genevestigator:O48523
Uniprot:O48523
Length = 631
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 219/671 (32%), Positives = 309/671 (46%)
Query: 1 MDNPSNN--FPEKQAWGTKEELLLACAVHRYGTQNWISVATEVQKRSSKFQLLTPLSCQQ 58
M P N+ EKQ W T EELLLACAVHR+GT++W SV+ E+QK S LT +C+
Sbjct: 1 MAKPENDVTLTEKQTWSTWEELLLACAVHRHGTESWNSVSAEIQKLSPNLCSLTASACRH 60
Query: 59 KYNDLKRRFSGNDAVSISADNSDDAIPWLDQLKKLRVAELKRELQLFDISIVSLQLKVER 118
KY DLK RF+ V S A PWL++L+KLRV EL+RE++ +D+SI +LQ KV++
Sbjct: 61 KYFDLKSRFTQELPVPESVAEISTA-PWLEELRKLRVDELRREVEQYDLSISTLQSKVKQ 119
Query: 119 LIXXXXXXXXXXXXXXXXIEENEPESLTDKPDGGEESDREN-RSVNESNSTDQKAEKTAK 177
L E + E ++ D GE + +NE+ S D K +
Sbjct: 120 L---EEEREMSFIKPDTETENLDLERKKERSDSGEPVPNPPVQLMNETISPDPK-----E 171
Query: 178 XXXXXXXXXXXXXXXXXXXXKAAGEDSCNGSCGSAAKELERNTDRVDSA---ELGESA-A 233
K AGEDSC GSC S KE N++RV+ EL ES
Sbjct: 172 IGSENTEREEEMAGSGGGESKLAGEDSCRGSCESVEKEPTTNSERVEPVSVTELIESEDG 231
Query: 234 ESMGRE-SGDVQSFVSLLRXXXXXXXXXXXXXXXXXDQSPAATKRICAESRPLVECIEII 292
S G E + DVQS SL R DQSP + K ES+PL+ +EI+
Sbjct: 232 ASRGEEITSDVQSSASLPRKGTSEPDKE--------DQSPTSAKDFTVESQPLISFVEIL 283
Query: 293 RSHKFGSFFERLDATKETPDYRSIVRQHTDLETIRTRLEENWYSGSNSSFFHDXXXXFNN 352
SH GS F R +ET +Y +I+R+H D E IR R+E Y +FF D NN
Sbjct: 284 LSHPCGSHFSRRLERQETIEYGTIIREHVDFEIIRKRVEGGLYKSWRINFFRDLLLLVNN 343
Query: 353 VIVFFDKNSSESAAAVELRQIVLKAMTRNTFDPNSSMREQYLEFAAAQNVKLDVQSSDFL 412
VF+ + SSE A +L Q+V K MT T S R++ + + + + + SS +
Sbjct: 344 ARVFYHRGSSEFKFAEQLHQLVKKQMT--TTLKGLSNRDE-ISISPPKEEVVAIPSSKPV 400
Query: 413 LSKPNILAP-LIACRKRSSITAKRAVXX--XXXXEAKKKEHT----ESSIGKNTVPSSVK 465
SKP + P ++ACRKRS++ AK + +AKK +H E + +S K
Sbjct: 401 SSKPRMSVPNIVACRKRSALAAKPLLLLPPGPDKKAKKTDHVVDYDEKPVSDKDGEASGK 460
Query: 466 SDDDCRATKKRTRERSASGSGNSSKNRKTRDNMKTKKNLXXXXXXXXXXXXEETECENSQ 525
DDD K TR R++S +++N K RD+ N+ E+ +
Sbjct: 461 DDDDSLIVKIMTRGRTSSTGKVANRNDKNRDS---SLNVDDSKDKVKKTDEEKKGGSKKK 517
Query: 526 RXXXXXXXXXXRSAEIFLSRITRSSTLKDFVISSEDGKGERAEQXXXXXXXXXXXXXXXX 585
R S++ L R S+ D SS GKG AEQ
Sbjct: 518 RAASFLRRMKVGSSDDTLKR----SSAAD---SSTTGKGGGAEQRKNNSNKADNKKT--- 567
Query: 586 XXXXQIVQKRSGGKKGEEMEGPVKKNGGRLTKRGAVPVA----VGAEVSRGKRRKE---- 637
I + R KK ++ + N GR ++R A P + + A+ SR KE
Sbjct: 568 ----PIPKIRQTNKKASPVK---RSNNGRNSEREAAPSSSSYPILAKRSRDAGEKEEASS 620
Query: 638 -SVQARKRSRK 647
S + +KR+R+
Sbjct: 621 YSPRLKKRARR 631
>TAIR|locus:2050574 [details] [associations]
symbol:AT2G44430 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR001005 InterPro:IPR001487
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 SMART:SM00717 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR017877
PROSITE:PS50090 EMBL:AC004521 HOGENOM:HOG000242892
ProtClustDB:CLSN2718100 EMBL:AY120707 EMBL:BT009664 IPI:IPI00538687
PIR:T02398 RefSeq:NP_181971.1 UniGene:At.43353
ProteinModelPortal:O64877 SMR:O64877 PRIDE:O64877
EnsemblPlants:AT2G44430.1 GeneID:819050 KEGG:ath:AT2G44430
TAIR:At2g44430 eggNOG:NOG318143 InParanoid:O64877 OMA:PIIVCRK
PhylomeDB:O64877 ArrayExpress:O64877 Genevestigator:O64877
Uniprot:O64877
Length = 646
Score = 502 (181.8 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 157/519 (30%), Positives = 239/519 (46%)
Query: 2 DNPSNNFPEKQAWGTKEELLLACAVHRYGTQNWISVATEVQKRSSKFQLLTPLS-CQQKY 60
DN + + QAWGT EELLLACAV R+G +W SVATEV+ RSS LL + C+ KY
Sbjct: 38 DNSNTKKSQTQAWGTWEELLLACAVKRHGFGDWDSVATEVRSRSSLSHLLASANDCRHKY 97
Query: 61 NDLKRRFSGNDAVSISADNSDDAIPWLDQLKKLRVAELKREL-QLFDISIVSLQLKVERL 119
DLKRRF + ++A ++ + ++ RV L QL ++ + L+ +VER
Sbjct: 98 RDLKRRFHEQEKTDVTATVEEE------EEEEERVGNNIPWLEQLRNLRVAELRREVERY 151
Query: 120 IXXXXXXXXXXXXXXXXIEENEPESLTDKPDGGEESDRENRSVNESNSTDQKAEKTAKXX 179
+EE E E +KPD E +E RS N+ + ++ + EK
Sbjct: 152 ----DCSILSLQLKVKKLEE-EREVGEEKPDL-ENERKEERSENDGSESEHR-EKAVSAA 204
Query: 180 XXXXXXXXXXXXXXXXXXKAAGEDSCNGSCGSAAKELERNTDRVDSAELGESAAESMGRE 239
E C G S +E + D+ + A + E
Sbjct: 205 EESDRENRSMNESNSTATAGEEERVC-GDEPSQTREDDSGNDKNPDPDPVNKDATAAEEE 263
Query: 240 SGDVQ--SFVSLLRXXXXXXXXXXXXXXXXXDQSPAATKRIC-AESRPLVECIEIIRSHK 296
G V S S Q A R ++S+PL+ +++IRSH
Sbjct: 264 EGSVSRGSEASHSDELGESGTSESKWKRKRRKQGGAGEIRSAESKSQPLISLLDLIRSHP 323
Query: 297 FGSFFERLDATKETPDYRSIVRQHTDLETIRTRLEENWYSGSNSSFFHDXXXXFNNVIVF 356
GS FER ++E DY+S+V+QH D+ETI+ +L++ Y S+ F+ D F N IVF
Sbjct: 324 RGSLFERRLRSQEAKDYKSMVKQHLDIETIQRKLKQGSYDSSSLIFYRDLQLLFTNAIVF 383
Query: 357 FDKNSSESAAAVELRQIVLKAMTRNTFDPNSSMREQYLEFAAAQNVKLDVQSSDFLLSKP 416
F +SSES AA ELR +V + M + T + +Q E + ++ K D ++SD LS+
Sbjct: 384 FPLSSSESMAAHELRAVVSQEMRKETGKAGPRLIKQ--EASGMRSGKADAETSDSSLSRQ 441
Query: 417 NILAPLIACRKRSSITAKRAVXXXXXXEAKK-KEHTESSIGKNTVPSSVKSD-------- 467
PL+ C+KR S++AK + + KE T S K+ + + V+S
Sbjct: 442 KSSGPLVVCKKRRSVSAKASPSSSSFSQKDDTKEETLSE-EKDNIATGVRSSRRANKVAA 500
Query: 468 ---DDCRATKKRTRERSASGSGNSSK-NRKTRDNMKTKK 502
++ + K R +++ NSS N +D KT+K
Sbjct: 501 VVANNTKTGKGRNKQKQTESKTNSSNDNSSKQDTGKTEK 539
Score = 309 (113.8 bits), Expect = 4.7e-27, Sum P(2) = 4.7e-27
Identities = 80/237 (33%), Positives = 126/237 (53%)
Query: 280 AESRPLVECIEIIRSHKFGSFFERLDATKETPDYRSIVRQHTDLETIRTRLEENWYSGSN 339
++S+PL+ +++IRSH GS FER ++E DY+S+V+QH D+ETI+ +L++ Y S+
Sbjct: 307 SKSQPLISLLDLIRSHPRGSLFERRLRSQEAKDYKSMVKQHLDIETIQRKLKQGSYDSSS 366
Query: 340 SSFFHDXXXXFNNVIVFFDKNSSESAAAVELRQIVLKAMTRNTFDPNSSMREQYLEFAAA 399
F+ D F N IVFF +SSES AA ELR +V + M + T + +Q E +
Sbjct: 367 LIFYRDLQLLFTNAIVFFPLSSSESMAAHELRAVVSQEMRKETGKAGPRLIKQ--EASGM 424
Query: 400 QNVKLDVQSSDFLLSKPNILAPLIACRKRSSITAKRAVXXXXXXEAKK-KEHT------- 451
++ K D ++SD LS+ PL+ C+KR S++AK + + KE T
Sbjct: 425 RSGKADAETSDSSLSRQKSSGPLVVCKKRRSVSAKASPSSSSFSQKDDTKEETLSEEKDN 484
Query: 452 -----ESSIGKNTVPSSVKSDDDC---RATKKRTRERSASGSGNSSKNRKTRDNMKT 500
SS N V + V ++ R +K+T ++ S + NSSK + KT
Sbjct: 485 IATGVRSSRRANKVAAVVANNTKTGKGRNKQKQTESKTNSSNDNSSKQDTGKTEKKT 541
Score = 65 (27.9 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 592 VQKRSGGKKGEEMEG-PVKKNGGRLTKRGAVPVAVGAEVSRGKRR----KESVQARKRSR 646
++ S GKK E+E PVK+ GR K+ A A A RG+ K++ Q +KR R
Sbjct: 587 LRSSSVGKKKAEVENTPVKRAPGRPQKKTAEATA-SASGKRGRDTGSTGKDNKQPKKRIR 645
Query: 647 K 647
K
Sbjct: 646 K 646
>TAIR|locus:2101477 [details] [associations]
symbol:AT3G60110 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR001005 InterPro:IPR001487
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 SMART:SM00717 EMBL:CP002686 GO:GO:0003677
GO:GO:0003682 SUPFAM:SSF46689 Gene3D:1.20.920.10 SUPFAM:SSF47370
ProtClustDB:CLSN2718100 EMBL:AY056393 EMBL:BT000519 IPI:IPI00538592
RefSeq:NP_567092.4 UniGene:At.26330 ProteinModelPortal:Q93ZQ2
SMR:Q93ZQ2 PRIDE:Q93ZQ2 EnsemblPlants:AT3G60110.1 GeneID:825181
KEGG:ath:AT3G60110 TAIR:At3g60110 OMA:RRTSKEI PhylomeDB:Q93ZQ2
Genevestigator:Q93ZQ2 Uniprot:Q93ZQ2
Length = 641
Score = 294 (108.6 bits), Expect = 2.5e-47, Sum P(2) = 2.5e-47
Identities = 74/175 (42%), Positives = 103/175 (58%)
Query: 2 DNPSNNFPEKQAWGTKEELLLACAVHRYGTQNWISVATEVQKRSSKFQLLTPLSCQQKYN 61
D+ SN KQ WGT EEL+L CAV R+ +W SVA EVQ RS +++ ++C+ KY
Sbjct: 40 DDNSNLNQIKQVWGTWEELVLTCAVKRHAFSDWDSVAKEVQARSRSSLIVSAVNCRLKYQ 99
Query: 62 DLKRRFS-----GNDAVSISADNSDDA--IPWLDQLKKLRVAELKRELQLFDISIVSLQL 114
DLKRRF G++ +A+ D+ I WL+QL+ L +AEL+RE+Q D SI+SLQL
Sbjct: 100 DLKRRFQDSVDVGDENTEAAANEEDEVGEISWLEQLRSLHMAELRREVQRCDDSILSLQL 159
Query: 115 KVERLIXXXXXXXXXXXXXXXXIEENEPESLTDKPDGGEESDRE-NRSVNESNST 168
KV++L +E +P + + ESDR+ NRS+NESNST
Sbjct: 160 KVKKLEEEKDGDDGDNKPDLKN-DETKPVRVNRETT---ESDRDDNRSMNESNST 210
Score = 275 (101.9 bits), Expect = 2.5e-47, Sum P(2) = 2.5e-47
Identities = 99/373 (26%), Positives = 163/373 (43%)
Query: 138 EENEPESLTDKPD-GGEESD--RENRSVNESNSTDQKAEKTAKXXXXXXXXXXXXXXXXX 194
EE + + +KPD +E+ R NR ES+ D ++ +
Sbjct: 166 EEKDGDDGDNKPDLKNDETKPVRVNRETTESDRDDNRSMNESNSTASVD----------- 214
Query: 195 XXXKAAGEDSCNGSCGSAAKELERNTDR--VDSAELGESAAESMGRESGDVQSFVSLLRX 252
K A D +G A E RN D V+ AE E ++ + S ++ + L
Sbjct: 215 ---KIADHDRLDGDKMVKANENSRNPDPDPVNKAETPEEEERTVSKRS-EMSNSGELDES 270
Query: 253 XXXXXXXXXXXXXXXXDQSPAATKRICAESRPLVECIEIIRSHKFGSFFERLDATKETPD 312
K +S+PL++ I++IRSH GS FE +++T D
Sbjct: 271 GTSNCLGKRKGQKYRSGGGGGGVKSAGDKSQPLIDIIKLIRSHPRGSVFESRLRSQDTKD 330
Query: 313 YRSIVRQHTDLETIRTRLEENWYSGSNSSFFHDXXXXFNNVIVFFDKNSSESAAAVELRQ 372
Y+ ++RQH D++TI ++E+ Y S+ SF+ D F N IVFF +SSES AA ELR
Sbjct: 331 YKRLIRQHLDMKTIEKKMEKGSYVSSSLSFYRDLKLLFTNAIVFFPTSSSESIAAQELRT 390
Query: 373 IVLKAMTRNTFDPNSSMREQYLEFAAAQNVKLDVQSSDFLLSKPNILAPLIACRKRSSIT 432
+V M + T + +K + +SS K ++L+ L+ C+K+SS
Sbjct: 391 LVSNEMKKRTGKLGHCV------------IKSEAESS-VSRQKSSVLS-LVPCKKKSSAL 436
Query: 433 AKRAVXXXXXXEAKKK--EHTESSIGKNTVPSSVKSDDDCRATKKRTRERSASGSGNSSK 490
K + + +KK E +E I T +S +S R +K+ + +G +
Sbjct: 437 KKTSPSSSSRQKDEKKSQEVSEEKIVTTTATTSARSSR--RTSKEIAVVAKDTKTGRAKN 494
Query: 491 NRKTRDNMKTKKN 503
N K + + KT+ +
Sbjct: 495 NIKKQTDTKTESS 507
Score = 105 (42.0 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 56/252 (22%), Positives = 101/252 (40%)
Query: 402 VKLDVQSSDFLLSKPNILAPLIACRKRSSITAKRAVXXXXXXEAKKK--EHTESSIGKNT 459
+K + +SS K ++L+ L+ C+K+SS K + + +KK E +E I T
Sbjct: 408 IKSEAESS-VSRQKSSVLS-LVPCKKKSSALKKTSPSSSSRQKDEKKSQEVSEEKIVTTT 465
Query: 460 VPSSVKSDDDCRATKKRTRERSASGSGNSSKNRKTRDNMKTKKNLXXXXXXXXXXXXEET 519
+S +S R +K+ + +G + N K + + KT+ + ++
Sbjct: 466 ATTSARSSR--RTSKEIAVVAKDTKTGRAKNNIKKQTDTKTESS-----------DDDDD 512
Query: 520 ECENSQRXXXXXXXXXXRSAEIFLSRITRSSTLKDFVISSEDGK---GERAEQXXXXXXX 576
E E + + +S FL RI ++S K +S++ K G ++
Sbjct: 513 EKEENSKTEKKTVADKKKSVADFLKRIKKNSPQKGKETTSKNQKKNDGNVKKENDHQKKS 572
Query: 577 XXXXXXXXXXXXXQIVQKRSGGKKGEEMEGPVKKNGGRLTKRGAVPVAVGAEVSRGKRR- 635
+ ++ +G KK E K + R + VA G RG+
Sbjct: 573 DGNVKKENSKVKPRELRSSTGKKKVEVENNNSKSSSKRKQTKETAEVATG---KRGRESG 629
Query: 636 KESVQARKRSRK 647
K+ Q RKRSR+
Sbjct: 630 KDDKQPRKRSRR 641
Score = 42 (19.8 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 14/39 (35%), Positives = 16/39 (41%)
Query: 208 SCGSAAKELERNTDRVDSA-----ELGESAAESMGRESG 241
S G E+E N + S E E A GRESG
Sbjct: 591 STGKKKVEVENNNSKSSSKRKQTKETAEVATGKRGRESG 629
Score = 40 (19.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 15/89 (16%), Positives = 32/89 (35%)
Query: 147 DKPDGGEESDRENRSVNESN-STDQKAEKTAKXXXXXXXXXXXXXXXXXXXXKAAGEDSC 205
+ P G+E+ +N+ N+ N + +K + K E
Sbjct: 542 NSPQKGKETTSKNQKKNDGNVKKENDHQKKSDGNVKKENSKVKPRELRSSTGKKKVEVEN 601
Query: 206 NGSCGSAAKELERNTDRVDSAELGESAAE 234
N S S+ ++ + T V + + G + +
Sbjct: 602 NNSKSSSKRKQTKETAEVATGKRGRESGK 630
>TAIR|locus:1006230673 [details] [associations]
symbol:BRD4 "AT1G61215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001487 Pfam:PF00439 PROSITE:PS50014
SMART:SM00297 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:BT015126 EMBL:BT015908
IPI:IPI00533894 RefSeq:NP_974063.1 UniGene:At.49477
ProteinModelPortal:Q6AWX2 SMR:Q6AWX2 STRING:Q6AWX2 PRIDE:Q6AWX2
EnsemblPlants:AT1G61215.1 GeneID:2745841 KEGG:ath:AT1G61215
TAIR:At1g61215 InParanoid:Q6AWX2 OMA:ESNDECH PhylomeDB:Q6AWX2
ProtClustDB:CLSN2681296 Genevestigator:Q6AWX2 Uniprot:Q6AWX2
Length = 475
Score = 192 (72.6 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 81/326 (24%), Positives = 128/326 (39%)
Query: 14 WGTKEELLLACAVHRYGTQNWISVATEVQKRSSKFQLLTPLSCQQKYNDLKRRFSGNDAV 73
WGT EELLL AV R+GT +W VA E++ S ++ TP C+ KY DL++R+ G A
Sbjct: 14 WGTWEELLLGGAVLRHGTGDWTVVADELRSHSLP-EIFTPEICKAKYKDLRKRYVGCKA- 71
Query: 74 SISADNSDDAIPWLDQLKKLRVAELKRELQLFDISIVSLQLKVERLIXXXXXXXXXXXXX 133
W ++LKK RVAELK L + SI SL+ K++ L
Sbjct: 72 ------------WFEELKKKRVAELKAALLKSEDSIGSLESKLQSLKSESNDECHQNNYD 119
Query: 134 XXXIEENEPESLTDKPDGGEESDRE-NRSVNESNSTDQKAEKTAKXXXXXXXXXXXXXXX 192
EP ++ GGE + ++ ++ ++ S Q+ T
Sbjct: 120 SSRTLSLEPSPKSE--GGGECTSKDTSKDLSSVGSFTQQELTTTNWSPEAKSEAPVVIEQ 177
Query: 193 XXXXXKAAGE--DSCNGSCGSAAKELERNTD---RVD-SAELGESAAESMGRESGDVQSF 246
+ +S G G + + R D S +G+ E E D+
Sbjct: 178 EKTKDLLHNDIFESVYGGGGQVLPSMRKKRGKRKRKDCSVSVGKEVMEVSAVEESDLFDT 237
Query: 247 VSLLRXXXXXXXXXXXXXXXXXDQSPAATKRICAESRPLV--ECIEIIRSHKFGSFFERL 304
+ + S A K + + EC + R RL
Sbjct: 238 SADIASIYRSKEAASTSSSQSRGHSLALPKELMKIYNTIAQNECALVFR--------RRL 289
Query: 305 DATKETPDYRSIVRQHTDLETIRTRL 330
D+ K Y+ +VR+H DL+T+++R+
Sbjct: 290 DSQKRGR-YKKLVRRHMDLDTVQSRI 314
Score = 131 (51.2 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 49/195 (25%), Positives = 84/195 (43%)
Query: 300 FFERLDATKETPDYRSIVRQHTDLETIRTRLEENWYSGSNSSFFHDXXXXFNNVIVFFDK 359
F RLD+ K Y+ +VR+H DL+T+++R+ S S F D NN +F+ K
Sbjct: 285 FRRRLDSQKRGR-YKKLVRRHMDLDTVQSRINGCSIS-SAKELFRDFLLVANNAAIFYSK 342
Query: 360 NSSESAAAVELRQIVLKAMTRNTFDPNSSMREQYLEFAAAQNVKLDVQSSDFLLSKPNIL 419
N+ E +AV LR IV K++ + + R A + V + Q S + P++
Sbjct: 343 NTREYKSAVGLRDIVTKSLRHYLTEDHPPHRSSIT--AGSTKVVVLHQKS----TSPSVR 396
Query: 420 APLIACRKRSSI-TAKRAVXXXXXXEAKKKEHTESSIGKNTVPSSVKSDDDCRATKKRTR 478
L A + R+ K V ++ + + + + + V SS A +K R
Sbjct: 397 TSLAAKKPRTGAHPLKTVVQDMAKTSSRGNKRSVTDLPVSAVKSSAAGKKGT-AVRKDGR 455
Query: 479 ERSASGSGNSSKNRK 493
+ + + RK
Sbjct: 456 QANRGLESPALMGRK 470
>UNIPROTKB|Q9H0E9 [details] [associations]
symbol:BRD8 "Bromodomain-containing protein 8" species:9606
"Homo sapiens" [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0043968 "histone H2A acetylation" evidence=IDA]
[GO:0043967 "histone H4 acetylation" evidence=IDA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IDA] [GO:0004887
"thyroid hormone receptor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007166 "cell surface receptor signaling pathway" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 SMART:SM00297 GO:GO:0005739 GO:GO:0007166
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0040008
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
EMBL:X87613 EMBL:AL136823 EMBL:AB209079 EMBL:AC109442 EMBL:AC113382
EMBL:BC008039 EMBL:BC008076 EMBL:AF016270 EMBL:X94234
IPI:IPI00016570 IPI:IPI00019226 IPI:IPI00148057 IPI:IPI00828194
PIR:S58225 PIR:S68142 RefSeq:NP_001157798.1 RefSeq:NP_006687.3
RefSeq:NP_631938.1 UniGene:Hs.519337 ProteinModelPortal:Q9H0E9
SMR:Q9H0E9 IntAct:Q9H0E9 STRING:Q9H0E9 PaxDb:Q9H0E9 PRIDE:Q9H0E9
Ensembl:ENST00000230901 Ensembl:ENST00000254900
Ensembl:ENST00000411594 GeneID:10902 KEGG:hsa:10902 UCSC:uc003lcf.1
UCSC:uc003lcg.3 UCSC:uc003lci.3 UCSC:uc021yea.1 CTD:10902
GeneCards:GC05M137475 HGNC:HGNC:19874 HPA:HPA001841 MIM:602848
neXtProt:NX_Q9H0E9 PharmGKB:PA134923194 HOGENOM:HOG000074125
HOVERGEN:HBG050732 InParanoid:Q9H0E9 KO:K11321 OrthoDB:EOG470THC
PhylomeDB:Q9H0E9 ChiTaRS:BRD8 GenomeRNAi:10902 NextBio:41403
PMAP-CutDB:Q9H0E9 ArrayExpress:Q9H0E9 Bgee:Q9H0E9 CleanEx:HS_BRD8
CleanEx:HS_SMAP2 Genevestigator:Q9H0E9 GermOnline:ENSG00000112983
GO:GO:0004887 Uniprot:Q9H0E9
Length = 1235
Score = 108 (43.1 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 25/94 (26%), Positives = 50/94 (53%)
Query: 283 RPLVECIEIIRSHKFGSFFERLDATKETPDYRSIVRQHTDLETIRTRLEENWYSGSNSSF 342
+ L+ ++I SH+F S F + + ++ P Y+ +V++ DL +++ L + + + F
Sbjct: 1110 KTLLPVWKMIASHRFSSPFLKPVSERQAPGYKDVVKRPMDLTSLKRNLSKGRIR-TMAQF 1168
Query: 343 FHDXXXXFNNVIVFFDKNSSESAAAVELRQIVLK 376
D F N +++ D + AVE+RQ VL+
Sbjct: 1169 LRDLMLMFQNAVMYNDSDHHVYHMAVEMRQEVLE 1202
Score = 76 (31.8 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 12 QAWGTKEELLLACAVHRYGTQNWISVATEVQ 42
+ W +E+L LA +V R G QNW+SV+ ++
Sbjct: 17 EPWSIREKLCLASSVMRSGDQNWVSVSRAIK 47
Score = 42 (19.8 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 10/28 (35%), Positives = 11/28 (39%)
Query: 139 ENEPESLTDKPDGGEESDRENRSVNESN 166
E EP L G EES R + N
Sbjct: 918 EREPSELLVGDGGSEESQEAARKASHQN 945
>FB|FBgn0004656 [details] [associations]
symbol:fs(1)h "female sterile (1) homeotic" species:7227
"Drosophila melanogaster" [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=NAS] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0004672 "protein kinase activity"
evidence=NAS] [GO:0007362 "terminal region determination"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] InterPro:IPR001487 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 SMART:SM00297 GO:GO:0016021
GO:GO:0045892 EMBL:AE014298 GO:GO:0007476 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359
PROSITE:PS51525 GeneTree:ENSGT00700000104285 GO:GO:0007362
EMBL:M23221 EMBL:M23222 EMBL:BT015270 EMBL:M15762 EMBL:M15763
EMBL:M15764 PIR:A43742 RefSeq:NP_001162699.1 RefSeq:NP_511078.2
RefSeq:NP_727228.1 RefSeq:NP_996368.1 RefSeq:NP_996369.1
RefSeq:NP_996370.1 UniGene:Dm.7909 ProteinModelPortal:P13709
SMR:P13709 DIP:DIP-19376N IntAct:P13709 MINT:MINT-925900
STRING:P13709 PaxDb:P13709 EnsemblMetazoa:FBtr0071119 GeneID:31722
KEGG:dme:Dmel_CG2252 CTD:31722 FlyBase:FBgn0004656
HOGENOM:HOG000264002 InParanoid:P13709 OMA:RYEPPVE
OrthoDB:EOG40P2P2 PhylomeDB:P13709 ChiTaRS:fs(1)h GenomeRNAi:31722
NextBio:775009 Bgee:P13709 GermOnline:CG2252 Uniprot:P13709
Length = 2038
Score = 112 (44.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 289 IEIIRSHKFGSFFER-LDATK-ETPDYRSIVRQHTDLETIRTRLEENWYSGSNSSFFHDX 346
+++I H F F++ +DA K PDY I++Q D+ TI+ RLE N+Y + + D
Sbjct: 47 MKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETI-QDF 105
Query: 347 XXXFNNVIVFFDKNSSESAAAVELRQIVLK 376
FNN V+ A L ++ L+
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQ 135
Score = 72 (30.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/145 (22%), Positives = 59/145 (40%)
Query: 360 NSSESAAAVE-LRQIVLKAMTRNTF---DPNSSMREQYLEFAAAQNVKLDVQSSDFLLSK 415
+SS++ A++ +Q KA R+ + ++ E A + + +SS L+
Sbjct: 1663 SSSKAKPAMDSFQQFRNKAKERDRLKLLEAAEKEKKNQKEAAEKEQQRKHHKSSSSSLTS 1722
Query: 416 PNIL--APLIACRKRSSITAKRAVXXXXXXEAKKKEHTESSIGK-NTVPSSVKSDDDCRA 472
+ A + A +++T A A SS G +T ++ D D
Sbjct: 1723 AAVAQAAAIAAATAAAAVTLGAAAAAALASSASNPSGGSSSGGAGSTSQQAITGDRDRDR 1782
Query: 473 TKKRTRERSASGSGNSSKNRKTRDN 497
++R RERS SG G S + ++
Sbjct: 1783 DRERERERSGSGGGQSGNGNNSSNS 1807
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.125 0.340 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 647 542 0.00095 119 3 11 23 0.48 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 611 (65 KB)
Total size of DFA: 272 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.68u 0.09s 46.77t Elapsed: 00:00:02
Total cpu time: 46.69u 0.09s 46.78t Elapsed: 00:00:02
Start: Mon May 20 17:30:37 2013 End: Mon May 20 17:30:39 2013